>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.

Probab=100.00 E-value=0 Score=547.58 Aligned_cols=288 Identities=42% Similarity=0.688 Sum_probs=271.8 Q ss_pred EEEEECCCCHHHHHHHHHHH-CCCEEEEECHH----------HCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC Q ss_conf 49999788978899999996-49859996136----------70878999999999755998999786344543223322 Q gi|254780921|r 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRP----------DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 (290) Q Consensus 2 kiLVtG~~G~iG~~l~~~l~-~~~~v~~~~r~----------~~D~~~~~~~~~~l~~~~pd~Vih~Aa~~~~~~~e~~~ 70 (290) T Consensus 1 rilitGa~GQlG~~L~~~l~~~g~~~~~~~~~~~~~~~~~~~~~Dl~dP~~l~~~~r~~~Pd~vvntAAYT~VD~AE~~~ 80 (317) T TIGR01214 1 RILITGANGQLGRELVQQLSKPGRVVVALTRSTRLKLAARWSQLDLTDPEALEELLRAIRPDAVVNTAAYTDVDGAESDP 80 (317) T ss_pred CEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCHHCCCCCCCCCH T ss_conf 97887387567999999707888278643687776113365440622468899999852875376230110100003777 Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC--CCCC Q ss_conf 102420122211000112233333344553211135----7554421111222211101245666653101222--3223 Q gi|254780921|r 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVI 144 (290) Q Consensus 71 ~~~~~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy~g----~~~~p~~E~d~~~P~~~Yg~sK~~~E~~v~~~~~--~~~I 144 (290) T Consensus 81 ~~AyavNa~A~~~lA~~A~~~Ga~~vh~STDYVFDGdfGG~~~~PY~e~D~~nPlnvYG~SK~~GE~a~~~~~~~e~~lI 160 (317) T TIGR01214 81 EKAYAVNALAPQNLARAAARVGARLVHISTDYVFDGDFGGEGKRPYREDDETNPLNVYGQSKLAGEQAVRAAGPDENALI 160 (317) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE T ss_conf 78765740789999999986691599986342344755788866887646879843121115689999998379985788 Q ss_pred CCCCCCEECCC---CCCCCEEECCC-CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH--HHCCCCCCCCCEEEECCCC Q ss_conf 55542000368---63200020112-466521530455454452236899999999844--2024433443137623866 Q gi|254780921|r 145 LRTAWVYSIFG---SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNL--IENSDTSLRGIFHMTADGG 218 (290) Q Consensus 145 lR~~~vyG~~~---~~~v~~~l~~~-~~~~~i~~~~d~~~~p~~v~D~a~~i~~~~~~~--~~~~~~~~~Giyn~~~~~~ 218 (290) T Consensus 161 vRTsWlY~~~g~~g~NF~~tMlrLaG~~~~~l~vV~DQ~GsPTy~~dLA~~~~~ll~~~~Wdv~~~a~~~GvYH~~~~-G 239 (317) T TIGR01214 161 VRTSWLYGAGGGSGRNFVKTMLRLAGKEREELRVVDDQIGSPTYAKDLARAIAALLERLNWDVEDAARARGVYHLANS-G 239 (317) T ss_pred EEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEC-C T ss_conf 985213448998842179999985378998403785576873589999999999997613340010136734677505-4 Q ss_pred CCCHHHHHHHHHHHHHHHC--CCCH-HEEECCHHHHCCCCCCCCCCCCCHHHHHHHHC---CCCCCHHHHHHHHHHHC Q ss_conf 6788999999999999727--9800-05762858808768997511008689999617---89999899999999719 Q gi|254780921|r 219 PVSWADFAEYIFWESAERG--GPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN---IRISTWKEGVRNILVNI 290 (290) Q Consensus 219 ~~s~~e~a~~I~~~~~~~~--~~~~-~i~~~~~~~~~~~a~RP~~~~Ld~~K~~~~lg---~~~~~~~e~i~~~i~~l 290 (290) T Consensus 240 ~~SWyeFA~~If~~~~~~g~~~~~~~~v~Pis~~~yp~pA~RPayS~Ld~~~~~~~~g~P~~~lp~Wr~al~~~l~~~ 317 (317) T TIGR01214 240 QVSWYEFAQAIFEVAGECGLLLKVPEEVKPISSKEYPTPARRPAYSVLDNTKLVKTLGKPLLVLPDWREALRAVLKEA 317 (317) T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC T ss_conf 313688999999999854710487200010113207789988643044568999960866679987899999997409

HHsearch alignment for GI: 254780921 and conserved domain: TIGR01214