HHsearch alignment for GI: 254780921 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=99.32 E-value=4.7e-12 Score=87.09 Aligned_cols=182 Identities=17% Similarity=0.198 Sum_probs=117.8
Q ss_pred EEEECCCCHHHHHHHHHH-HCCCEEEEECHH----------------------HCCCCCHHHHHHHHHH-----CCCCEE
Q ss_conf 999978897889999999-649859996136----------------------7087899999999975-----599899
Q gi|254780921|r 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRP----------------------DIDLLKPKDFASFFLS-----FSPDVI 54 (290)
Q Consensus 3 iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~----------------------~~D~~~~~~~~~~l~~-----~~pd~V 54 (290)
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiL 79 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDIL 79 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEE
T ss_conf 967167861679999999867995999659825788899999985697599996038888999999999999829-9089
Q ss_pred EECCCCCCCCC----CCCCCCEEEEECCCCCCCCCCCCC----C-CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97863445432----233221024201222110001122----3-33333445532-11135755442111122221110
Q gi|254780921|r 55 INPAAYTAVDK----AEDEPEIAFSINAEGAGAIAKAAD----S-IGIPCIYISTD-YVFDGLSRTPIDEFSPTNPLNIY 124 (290)
Q Consensus 55 ih~Aa~~~~~~----~e~~~~~~~~~Nv~~~~~l~~~~~----~-~~~~~I~iSS~-~Vy~g~~~~p~~E~d~~~P~~~Y 124 (290)
T Consensus 80 VNNAGITrD~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQ------------aNY 147 (238)
T TIGR01830 80 VNNAGITRDNLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQ------------ANY 147 (238)
T ss_pred EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCH------------HHH
T ss_conf 97874134301004885568999986126687888998898875067434861002000068742------------678
Q ss_pred HHHHH----HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCE-EEC--------CCCCCCCEEECCCCCCCCCCHHHHHHH
Q ss_conf 12456----66653101222322355542000368632000-201--------124665215304554544522368999
Q gi|254780921|r 125 GKSKL----AGEEKVASYTNNYVILRTAWVYSIFGSNFLLS-MLR--------LAKERREISVVCDQFGTPTSALQIARA 191 (290)
Q Consensus 125 g~sK~----~~E~~v~~~~~~~~IlR~~~vyG~~~~~~v~~-~l~--------~~~~~~~i~~~~d~~~~p~~v~D~a~~ 191 (290)
T Consensus 148 aASKAG~IGftKSlAkElasRnI--tVNaV----APGFI~TdMT~~L~e~~~~~~l~~IPLgR~----G~---pEeVA~~ 214 (238)
T TIGR01830 148 AASKAGVIGFTKSLAKELASRNI--TVNAV----APGFIETDMTDKLSEKVKKAMLSQIPLGRF----GT---PEEVANA 214 (238)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCC--EEEEE----CCCCCCCCCCHHCCHHHHHHHHHCCCCCCC----CC---HHHHHHH
T ss_conf 88875589999999986036870--58887----489989700021698899999852772326----77---6569999
Q ss_pred HHHHHHHHHHCCCCCCCCCEEE
Q ss_conf 9999984420244334431376
Q gi|254780921|r 192 IIQIAHNLIENSDTSLRGIFHM 213 (290)
Q Consensus 192 i~~~~~~~~~~~~~~~~Giyn~ 213 (290)
T Consensus 215 v~FLASd~---AsYITGqv~~V 233 (238)
T TIGR01830 215 VAFLASDE---ASYITGQVIHV 233 (238)
T ss_pred HHHHCCCC---CCCCCCCEEEC
T ss_conf 99732512---47425516630