HHsearch alignment for GI: 254780921 and conserved domain: TIGR01963
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=98.87 E-value=7e-09 Score=69.21 Aligned_cols=127 Identities=20% Similarity=0.251 Sum_probs=91.0
Q ss_pred CE-EEEECCCCHHHHHHHHHH-HCCCEEEEECHH--H---------------------CCCCCHHHHHHHHHHC-----C
Q ss_conf 94-999978897889999999-649859996136--7---------------------0878999999999755-----9
Q gi|254780921|r 1 MK-CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRP--D---------------------IDLLKPKDFASFFLSF-----S 50 (290)
Q Consensus 1 Mk-iLVtG~~G~iG~~l~~~l-~~~~~v~~~~r~--~---------------------~D~~~~~~~~~~l~~~-----~ 50 (290)
T Consensus 1 ~ktalVTGaaSGIG~~iA~~LA~aGa~v~~~d~~~~~~~~~~~~~~~~~~G~~v~~~~~D~T~~~e~~~~~~~~~~~fG~ 80 (258)
T TIGR01963 1 GKTALVTGAASGIGLAIAKALAAAGANVVVNDLGEADEGAEAAAKVATDAGGSVIYLVADVTKEEEIADMIQAVAAEFGG 80 (258)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf 94899965871678999999987298899846788789999999999961883577514788889999999999998568
Q ss_pred CCEEEECCCCCCCCCCCCCC----CEEEEECCCCCCCCCCC----CCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999786344543223322----10242012221100011----22333--3334455321113575544211112222
Q gi|254780921|r 51 PDVIINPAAYTAVDKAEDEP----EIAFSINAEGAGAIAKA----ADSIG--IPCIYISTDYVFDGLSRTPIDEFSPTNP 120 (290)
Q Consensus 51 pd~Vih~Aa~~~~~~~e~~~----~~~~~~Nv~~~~~l~~~----~~~~~--~~~I~iSS~~Vy~g~~~~p~~E~d~~~P 120 (290)
T Consensus 81 ~DiLVNNAG~QhVaPiEeFP~~~w~~iiav~LtsaF~t~raAlP~Mk~~gwGGRIiNIAS~H---GLvASp~KSAYVAAK 157 (258)
T TIGR01963 81 LDILVNNAGIQHVAPIEEFPPEKWDRIIAVMLTSAFHTIRAALPHMKKQGWGGRIINIASVH---GLVASPFKSAYVAAK 157 (258)
T ss_pred CCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEC---CCCCCCCHHHHHHHH
T ss_conf 87488446401417654778667873730216888999975064321378553799710100---000353213456774
Q ss_pred CCCCHHHHHH
Q ss_conf 1110124566
Q gi|254780921|r 121 LNIYGKSKLA 130 (290)
Q Consensus 121 ~~~Yg~sK~~ 130 (290)
T Consensus 158 HG~~GLTKv~ 167 (258)
T TIGR01963 158 HGLIGLTKVL 167 (258)
T ss_pred HHHHHHHHHH
T ss_conf 3021211555