HHsearch alignment for GI: 254780921 and conserved domain: cd01336
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.65 E-value=0.0011 Score=39.90 Aligned_cols=95 Identities=23% Similarity=0.245 Sum_probs=56.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCC--------EEEEECHHH---------CCCCC-----------HHHHHHHHHHCCCC
Q ss_conf 949999788978899999996498--------599961367---------08789-----------99999999755998
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQDV--------EIIRVGRPD---------IDLLK-----------PKDFASFFLSFSPD 52 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~~~--------~v~~~~r~~---------~D~~~-----------~~~~~~~l~~~~pd 52 (290)
T Consensus 3 ~kV~VtGAaG~Ig~~l~~~la~g~~~g~~~~i~L~L~Di~~~~~~l~Gv~mel~d~a~p~l~~i~~~~~~~~a~~~a--D 80 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDV--D 80 (325)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCEEECCCHHHHHCCC--C
T ss_conf 19999888718899999999758856899705999966778677655267457437864558735228878983688--7
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC---CCCCCCCC
Q ss_conf 999786344543223322102420122211000112233---33334455
Q gi|254780921|r 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---GIPCIYIS 99 (290)
Q Consensus 53 ~Vih~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~---~~~~I~iS 99 (290)
T Consensus 81 vvii~ag~prkpG--mtR~DLl~~Na~I~k~~~~~I~~~a~p~~~viVv~ 128 (325)
T cd01336 81 VAILVGAMPRKEG--MERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG 128 (325)
T ss_pred EEEEECCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 8999488779999--82799999899999999999998614581999927