HHsearch alignment for GI: 254780921 and conserved domain: cd01489
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=91.70 E-value=0.74 Score=24.04 Aligned_cols=102 Identities=25% Similarity=0.216 Sum_probs=56.3
Q ss_pred EEEEECCCCHHHHHHHHHHHC-CC-EEEEECHHH--------------CCCCC--HHHHHHHHHHCCCCEEE--ECCCCC
Q ss_conf 499997889788999999964-98-599961367--------------08789--99999999755998999--786344
Q gi|254780921|r 2 KCLVIGNNGQIAQSLSSMCVQ-DV-EIIRVGRPD--------------IDLLK--PKDFASFFLSFSPDVII--NPAAYT 61 (290)
Q Consensus 2 kiLVtG~~G~iG~~l~~~l~~-~~-~v~~~~r~~--------------~D~~~--~~~~~~~l~~~~pd~Vi--h~Aa~~ 61 (290)
T Consensus 1 KVlvvGa-GglG~e~lk~La~~Gvg~i~ivD~D~Ie~SNLnRQfLf~~~diGk~Ka~~a~~~l~~~Np~v~I~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 9899888-888999999999828985999719922610146682768221887099999999998888967998616766
Q ss_pred CCCCC---CCCCCEEE--EECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 54322---33221024--201222110001122333333445532111
Q gi|254780921|r 62 AVDKA---EDEPEIAF--SINAEGAGAIAKAADSIGIPCIYISTDYVF 104 (290)
Q Consensus 62 ~~~~~---e~~~~~~~--~~Nv~~~~~l~~~~~~~~~~~I~iSS~~Vy 104 (290)
T Consensus 80 ~~~~~~~f~~~~DvVi~alDN~~aR~~vN~~C~~~~~PlIegGt~G~~ 127 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVPLIESGTTGFL 127 (312)
T ss_pred CCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCE
T ss_conf 864349889629999976678999999999999839975972024641