HHsearch alignment for GI: 254780921 and conserved domain: cd05294
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.47 E-value=0.003 Score=37.49 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=56.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHCC---CEEEEECHHH---------CCCCCHHH------------HHHHHHHCCCCEEEE
Q ss_conf 94999978897889999999649---8599961367---------08789999------------999997559989997
Q gi|254780921|r 1 MKCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPD---------IDLLKPKD------------FASFFLSFSPDVIIN 56 (290)
Q Consensus 1 MkiLVtG~~G~iG~~l~~~l~~~---~~v~~~~r~~---------~D~~~~~~------------~~~~l~~~~pd~Vih 56 (290)
T Consensus 1 mKV~IiGAaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~~~da--DivVi 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGS--DIVII 78 (309)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEHHHHCCCCCCCCCCEEEECCCHHHHCCC--CEEEE
T ss_conf 9899999997699999999983799875999605564342311235545034336887679827988996899--99998
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC--CCCCCC
Q ss_conf 8634454322332210242012221100011223333--334455
Q gi|254780921|r 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYIS 99 (290)
Q Consensus 57 ~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~--~~I~iS 99 (290)
T Consensus 79 tAG~~rk~--g~tR~dLl~~Na~I~~~i~~~i~~~~p~~ivivvt 121 (309)
T cd05294 79 TAGVPRKE--GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVT 121 (309)
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 78988995--99878999989999999998764269984999768