HHsearch alignment for GI: 254780921 and conserved domain: pfam07993
>pfam07993 NAD_binding_4 Male sterility protein. This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included.
Probab=99.94 E-value=8.2e-28 Score=175.76 Aligned_cols=182 Identities=22% Similarity=0.146 Sum_probs=124.0
Q ss_pred EECCCCHHHHHHHHHHH-C--CCEEEEECHHH--------------------------------CCCC------CHHHHH
Q ss_conf 99788978899999996-4--98599961367--------------------------------0878------999999
Q gi|254780921|r 5 VIGNNGQIAQSLSSMCV-Q--DVEIIRVGRPD--------------------------------IDLL------KPKDFA 43 (290)
Q Consensus 5 VtG~~G~iG~~l~~~l~-~--~~~v~~~~r~~--------------------------------~D~~------~~~~~~ 43 (290)
T Consensus 1 vTGaTGFlG~~ll~~Ll~~~~~~~V~~LvR~~~~~~~~~r~~~~~~~~~~~~~~~~~~ri~~v~gDl~~~~lGL~~~~~~ 80 (245)
T pfam07993 1 LTGATGFLGKVLLEKLLRSCPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERIIPVAGDLSEPNLGLSDEDFQ 80 (245)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCCCCCHHHHH
T ss_conf 93843599999999999579997899996789840589999999985675310103477799956168865798999999
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 99975599899978634454322332210242012221100011223333-33445532111357554421111222---
Q gi|254780921|r 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTN--- 119 (290)
Q Consensus 44 ~~l~~~~pd~Vih~Aa~~~~~~~e~~~~~~~~~Nv~~~~~l~~~~~~~~~-~~I~iSS~~Vy~g~~~~p~~E~d~~~--- 119 (290)
T Consensus 81 ~l~~~v--d~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~~a~~~~~~~~v~vSS~~~~~-~~~~~~~~~~~~~~~~ 154 (245)
T pfam07993 81 ELAEEV--DVIIHNAATVNFV---EPYSDLRATNVLGTREVLRLAKQMKKLPFHHVSTAYVNG-ERGGLLEEKPYPLDED 154 (245)
T ss_pred HHHHCC--CEEEECCEEECCC---CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECC-CCCCCCCCCCCCCCCC
T ss_conf 998359--9999874330356---888999999999999999999976998599995816506-6778766656788876
Q ss_pred -------CCCCCHHHHHHHHHHHCCCCC--CCCCCCCCCCEECCCCC------CCCEEECCC-CCCCCEEECC--CCCCC
Q ss_conf -------211101245666653101222--32235554200036863------200020112-4665215304--55454
Q gi|254780921|r 120 -------PLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSIFGSN------FLLSMLRLA-KERREISVVC--DQFGT 181 (290)
Q Consensus 120 -------P~~~Yg~sK~~~E~~v~~~~~--~~~IlR~~~vyG~~~~~------~v~~~l~~~-~~~~~i~~~~--d~~~~ 181 (290)
T Consensus 155 ~~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~I~Rp~~v~G~s~~G~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~d 234 (245)
T pfam07993 155 EPALLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLD 234 (245)
T ss_pred CHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
T ss_conf 01103666882899999999999997332998999698786589888706054699999999987997624699885564
Q ss_pred CCCHHHHHHHH
Q ss_conf 45223689999
Q gi|254780921|r 182 PTSALQIARAI 192 (290)
Q Consensus 182 p~~v~D~a~~i 192 (290)
T Consensus 235 ~vpVD~va~ai 245 (245)
T pfam07993 235 LVPVDYVANAI 245 (245)
T ss_pred EEEHHHHHHHC
T ss_conf 77399997259