BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780921|ref|YP_003065334.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus str. psy62] (290 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780921|ref|YP_003065334.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus str. psy62] gi|254040598|gb|ACT57394.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus str. psy62] Length = 290 Score = 600 bits (1548), Expect = e-170, Method: Compositional matrix adjust. Identities = 290/290 (100%), Positives = 290/290 (100%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY Sbjct: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP Sbjct: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG Sbjct: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY Sbjct: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI Sbjct: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 >gi|315122653|ref|YP_004063142.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496055|gb|ADR52654.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 289 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 221/288 (76%), Positives = 246/288 (85%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LVIGNNGQ+A SL ++ ++ E+IR+GRPDIDLLKPKDF FLSF+PDVIINPAAY Sbjct: 1 MKFLVIGNNGQVATSLFNLSGKNTEVIRLGRPDIDLLKPKDFVKIFLSFAPDVIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDEP AF+IN EGAGA+A AA+SIG+PCI+ISTDYVFDG S+TP+ E SPTNP Sbjct: 61 TAVDKAEDEPHNAFAINTEGAGAVAAAAESIGVPCIHISTDYVFDGSSQTPLCETSPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L IYGKSKLAGEEKV S T+NYVILRTAWVYS+FG+NF LSMLRL+KE REISVVCDQFG Sbjct: 121 LGIYGKSKLAGEEKVMSCTDNYVILRTAWVYSLFGTNFFLSMLRLSKEYREISVVCDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTSA QIA A+IQIA NL+ NSD SLRGIFHMTA+GGPVSWADFAEYIF S E GG Sbjct: 181 TPTSASQIAIAVIQIARNLVNNSDNSLRGIFHMTANGGPVSWADFAEYIFLVSTELGGNS 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV RI T QYPTKA RPAYS LDCSKL HN+RIS+WKEGVRNI + Sbjct: 241 CKVRRISTNQYPTKARRPAYSFLDCSKLEKIHNVRISSWKEGVRNIFI 288 >gi|332715610|ref|YP_004443076.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3] gi|325062295|gb|ADY65985.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3] Length = 297 Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 144/290 (49%), Positives = 191/290 (65%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQ+ +L + +EI+ +GRP++DL +P PDV+++ AAY Sbjct: 1 MRLAVTGKNGQVVSALQAQAGPGLEIVALGRPELDLARPDTVFKALRDAKPDVVVSAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+IAF++N +GA A+A+AA+ IG+P I+ISTDYVFDG T E PT P Sbjct: 61 TAVDKAETEPDIAFAVNRDGAKAVARAANDIGVPVIHISTDYVFDGTKTTAYVENDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKL GE+ V+ T+NY +LRTAWVYS +GSNF+ +MLRL++ R EI+VV DQFG Sbjct: 121 ASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTMLRLSESRDEINVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA AI+ IA L + LRG+FHM+ G +WA FA+ IF SAE GG Sbjct: 181 CPTSANDIAIAIVSIAKRLATDPSAHLRGVFHMSGT-GETNWAGFAKQIFAFSAENGGKS 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T QYPT A RPA S LDC KL + IR+ W+ R ++ + Sbjct: 240 IVVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIRLPEWQTSTRAVMAAL 289 >gi|15890374|ref|NP_356046.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens str. C58] gi|15158591|gb|AAK88831.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens str. C58] Length = 297 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 143/290 (49%), Positives = 202/290 (69%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQ+ +L ++ D+EI+ +GRP++DL++P++ PDV+++ AAY Sbjct: 1 MRLAVTGRNGQVVSALQALAGADLEIVTLGRPELDLVRPENVLQALREAKPDVVVSAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+IAF++N +GA A+A+AA +G+P I++STDYVFDG T E PT P Sbjct: 61 TAVDKAESEPDIAFAVNRDGAKAVAQAAKELGVPVIHLSTDYVFDGSKATAYVESDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYG+SKL GE V+ T+NYV+LRTAWVYS +G+NF+ +ML+L++ R EI+VV DQFG Sbjct: 121 TSIYGRSKLKGERAVSEATDNYVVLRTAWVYSEYGNNFVKTMLKLSESRDEINVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA A++ IA L+E+S SLRGIFH++ G +WA+FA+ IF SAE GG Sbjct: 181 CPTSATDIAAAVVAIARKLVEDSSASLRGIFHLSGT-GETTWANFAKQIFAFSAENGGKS 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I TKQYPT A RPA S L+C KL + +++ +W+ R ++ + Sbjct: 240 MIVNDITTKQYPTPAPRPANSRLNCRKLEEIYGLKLPSWQTSTREVVTAL 289 >gi|222148116|ref|YP_002549073.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] gi|221735104|gb|ACM36067.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] Length = 301 Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 143/281 (50%), Positives = 187/281 (66%), Gaps = 3/281 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ QSL +D++++ +GRP +DL P + L+ PD+II+ AA Sbjct: 6 RYLVTGLAGQVVQSLLEKASDRKDIDLVALGRPQLDLADPATIEAAVLAAKPDLIISAAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + AF++N EG G +A+ A ++ IP I+ISTDYVFDG +P +E P Sbjct: 66 YTAVDQAETDEATAFTVNGEGPGELARVAKALDIPIIHISTDYVFDGSKASPYNEADPVA 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKL GE +VA+ T+N+ ILRTAWVYS FG NFLL+MLRLA+ R E+ VV DQ Sbjct: 126 PLGVYGRSKLEGERRVAAETDNHAILRTAWVYSPFGKNFLLTMLRLAETRDELGVVADQI 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA A++++A NL+ + LRG FHMT G SWA+FA IF SAE+ P Sbjct: 186 GNPTSALDIADAVLKVADNLLSSKAADLRGTFHMTG-TGEASWAEFAREIFRLSAEQNDP 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +KV I YPT A RPA S LDC+KLA H I I W+ Sbjct: 245 SAKVNPIPASAYPTPAKRPANSRLDCAKLARVHAIDIPDWR 285 >gi|192288555|ref|YP_001989160.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris TIE-1] gi|192282304|gb|ACE98684.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris TIE-1] Length = 297 Score = 285 bits (730), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 142/286 (49%), Positives = 194/286 (67%), Gaps = 3/286 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G +GQ+AQ+L + EII + RP+IDL +P + ++ PD ++N AA Sbjct: 1 MRIVVTGRHGQVAQALHERAAGTNAEIILLARPEIDLTRPSEIEGVLIALKPDAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE E ++A++INAEGAGA+A+ A +G+P + +STDYVFDG + P E PTN Sbjct: 61 YTAVDQAESEHDLAYAINAEGAGAVARTAAKLGVPMVQLSTDYVFDGTAEQPYRETDPTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG SKLAGE VA ++ +LRT+WVYS FG NF+ +ML LA++R E+ VVCDQ Sbjct: 121 PLSAYGASKLAGERAVAEAAPDHAVLRTSWVYSPFGKNFVRTMLALARQRDEVRVVCDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI-ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PTSAL IA ++ + NL+ E + + +RGIFHMTADG +WA FAE IF S GG Sbjct: 181 GSPTSALDIADGVLGVVRNLLAEPTRSDMRGIFHMTADGT-ATWAAFAEAIFAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P +KV I T +YPT A RP S LD S LA H IR+ W++ ++ Sbjct: 240 PSAKVIPIPTTEYPTPAKRPTNSRLDSSALATAHGIRLPHWRQSLQ 285 >gi|222148464|ref|YP_002549421.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] gi|221735452|gb|ACM36415.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] Length = 301 Score = 284 bits (727), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 142/281 (50%), Positives = 186/281 (66%), Gaps = 3/281 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ QSL +D++++ +GRP +DL + + PD+II+ AA Sbjct: 6 RYLVTGLAGQVVQSLLEKASDRKDIDLVALGRPQLDLADAATIEAAVRAAKPDLIISAAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + AF++N EG G +A+ A ++ IP I+ISTDYVFDG +P +E P Sbjct: 66 YTAVDQAETDEAAAFAVNGEGPGELARVAKALDIPIIHISTDYVFDGSKASPYNEADPVA 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKL GE +VA+ T+N+ ILRTAWVYS FG NFLL+MLRLA+ R E+ VV DQ Sbjct: 126 PLGVYGRSKLEGERRVAAETDNHAILRTAWVYSPFGKNFLLTMLRLAETRDELGVVADQI 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA A++++A NL+ + LRG FHMT G SWA+FA IF SAE+ GP Sbjct: 186 GNPTSALDIADAVLKVADNLLSSKAADLRGTFHMTGT-GEASWAEFATEIFRLSAEQNGP 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +KV I YPT A RPA S LDC+KLA H I I W+ Sbjct: 245 SAKVNPIPASAYPTPAKRPANSRLDCAKLARVHAIDIPDWR 285 >gi|319784645|ref|YP_004144121.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170533|gb|ADV14071.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 295 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 137/281 (48%), Positives = 188/281 (66%), Gaps = 3/281 (1%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G +GQ+A SL ++ VE+I +GRP +DL +P + PD++++ A Sbjct: 1 MRLVVTGRDGQVAASLLEAAQAAAGVEVIAIGRPQLDLARPDTVIEAIAAVKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP++AF++NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 AYTAVDQAEDEPDLAFAVNAVGAGKVAQAAALLGVPVIHLSTDYVFDGTAHGAYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE+ VAS ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ Sbjct: 121 APRSVYGASKLAGEQAVASANPRHLILRTAWVYSPFGKNFVKTMLRLAADRDEISVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA I +A +L + + G++H+ D G +WA+FA+ +F S ERG Sbjct: 181 WGNPTSALDIADGIFHMARHLKADLKFAEWGVYHVAGD-GDTNWAEFAQRVFVTSLERGR 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 PY+ V I T YPTKA RPA S L+C K+A T R +W Sbjct: 240 PYAAVRGISTSDYPTKAKRPANSRLNCGKMAATFGWRCRSW 280 >gi|326385993|ref|ZP_08207617.1| putative dTDP-4-dehydrorhamnose reductase [Novosphingobium nitrogenifigens DSM 19370] gi|326209218|gb|EGD60011.1| putative dTDP-4-dehydrorhamnose reductase [Novosphingobium nitrogenifigens DSM 19370] Length = 297 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/285 (51%), Positives = 191/285 (67%), Gaps = 10/285 (3%) Query: 1 MKCLVIGNNGQIAQSL-----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M+ V G +GQ+ Q+L SS C I +GRP+IDL +P+ A F F+PDVI+ Sbjct: 1 MRIAVTGTHGQVVQALGERSASSGCT----IAAIGRPEIDLARPETLAGVFDRFAPDVIV 56 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAV+ AE EP++A +N GAGA+A A +G+P I++STDYV+ G P E Sbjct: 57 SAAAYTAVNHAEAEPDLAMVVNCAGAGAVAAEAARLGVPVIHLSTDYVYAGTGNRPWRED 116 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT+PL +YG +KLAGE VA+ T ++VILRTAW+YS FG+NF+ +MLRLA +R ++ VV Sbjct: 117 DPTDPLGVYGVTKLAGERAVAAITPDHVILRTAWIYSPFGTNFVKTMLRLAVDRPQVRVV 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PTSAL IA II IA NL+ + +LRG+FHM A SWADFAE IF +SA Sbjct: 177 ADQVGNPTSALDIADGIIAIARNLVADRSDALRGVFHM-AGRDEASWADFAEGIFEQSAA 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 RGGP + V RI T ++PT A RPA S LDC KLA H + + W+ Sbjct: 236 RGGPVASVARITTDEFPTPAPRPANSRLDCGKLAELHGVILPPWR 280 >gi|116251390|ref|YP_767228.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. viciae 3841] gi|115256038|emb|CAK07119.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. viciae 3841] Length = 295 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 152/291 (52%), Positives = 196/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEISAVGRPEMDLADPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAG +A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGVVAQAAARIGAPVIHISTDYVFSGDKVSAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGNNFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + + SLRGIFH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIASRIVADPEPSLRGIFHLTGS-GEASWADFAEEIFTELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 TVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 290 >gi|110349046|gb|ABG73090.1| RfbD [Rhizobium leguminosarum bv. trifolii TA1] Length = 295 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 151/291 (51%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQI QSL + DVEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQIVQSLLRRGAEMDVEISAVGRPEMDLADPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAGA + +IG P I+IST+YVF G E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGAGCRGFCAIGAPVIHISTEYVFSGDRAFAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGEE VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEEAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIATRVVADPEPSLRGTFHLTGS-GEASWADFAEEIFAELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 TVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMAIVMQDL 290 >gi|241204006|ref|YP_002975102.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857896|gb|ACS55563.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 295 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAEMGVEISAVGRPEMDLADPVSIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAGA+A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGAVAEAAARIGAPVIHISTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NF+ +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFVKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIASRIVADPAPSLRGTFHLTGS-GEASWADFAEEIFTELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTFVMQDL 290 >gi|218680959|ref|ZP_03528856.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 894] Length = 295 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 150/291 (51%), Positives = 196/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VE+ VGRP++DL P+ A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEVSVVGRPEMDLADPESIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+AKAA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAKAAARIGVPVIHISTDYVFSGDKTSAYSEKDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRGIFH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGIFHLTGS-GEASWADFAEEIFAALLKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 SVRIERIPTADYPTPAKRPANSRLNGEKLARTYGIRLPEWKKSMTVVMQDL 290 >gi|296447933|ref|ZP_06889842.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b] gi|296254570|gb|EFH01688.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b] Length = 300 Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 135/280 (48%), Positives = 172/280 (61%), Gaps = 1/280 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ V G GQ+ SL EI+ +GRP +DL+ S D I+ AAY Sbjct: 3 IRIAVTGAQGQVVTSLLERASSTAEIVALGRPKLDLMDRDSVLSALRDSRCDAIVGAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPEIA +N GAG +A+AA +G+P ++ISTDYVFDG + P E PT P Sbjct: 63 TAVDKSEQEPEIAMRVNGAGAGFVAEAAAELGVPLVHISTDYVFDGTAARPYREDDPTAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKL GE +V + ILRTAWVYS FG+NF+ +MLRL + R E+ VV DQ G Sbjct: 123 LGVYGASKLEGETRVLAACPGATILRTAWVYSPFGANFVRTMLRLGETREEVGVVADQLG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSAL IA A + + L +++D +LRG+FHMT G SWAD AE IF +AE G Sbjct: 183 NPTSALDIADATLAVVTRLAQDADPALRGVFHMTGS-GEASWADVAEAIFARAAEHGRAP 241 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V RI T YPT A RPA S LD SKLA H + + W+ Sbjct: 242 VRVRRITTADYPTPAKRPANSRLDNSKLARLHGVALPDWR 281 >gi|329848962|ref|ZP_08263990.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19] gi|328844025|gb|EGF93594.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19] Length = 293 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 135/280 (48%), Positives = 186/280 (66%), Gaps = 2/280 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G GQ+ S+ ++ Q +E+IR+G PDIDL +P + + SPDVII+ AA Sbjct: 1 MRVLITGTEGQVDTSVKALGEQLGIEVIRIGLPDIDLSRPDSLEAPVRAASPDVIISSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A IN + G +A+ A S+ +P +++STDYVF G DE Sbjct: 61 YTAVDKAESEPDLARRINGDAPGELARIAASLNVPLLHLSTDYVFPGDKDGVYDEADTPE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KLAGE ++A+ T+N+VILRTAWVYS +G+NF+ +MLRL K R EI+VV DQ Sbjct: 121 PASVYGATKLAGERQIAANTDNFVILRTAWVYSPYGNNFVKTMLRLGKTRDEINVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +IARA++ +A + + D LRGIFH+T G +WADFAE IF ES +RGG Sbjct: 181 GCPTYAPEIARALLTVAQKIAADPDPKLRGIFHLTGT-GETTWADFAETIFLESVKRGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 KV I T YPT A RPA S L +KL + + +++ W Sbjct: 240 AVKVNPIATSDYPTPAKRPANSRLSGAKLHSIYGLQLDPW 279 >gi|260460163|ref|ZP_05808415.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium opportunistum WSM2075] gi|259033808|gb|EEW35067.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium opportunistum WSM2075] Length = 307 Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 137/295 (46%), Positives = 192/295 (65%), Gaps = 7/295 (2%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G +GQ+A SL + DVE++ +GRP++DL +P+ + PD++++ A Sbjct: 1 MRIVVTGRDGQVAASLLEAGQSRADVEVVAIGRPELDLARPETVFDAISAAKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP+ AF++NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 AYTAVDQAEDEPDPAFAVNATGAGKVAEAAARLGVPVIHLSTDYVFDGSAPGAYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SKLAGE+ VA+ ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ Sbjct: 121 APLGVYGASKLAGEQAVAAAGPRHLILRTAWVYSPFGRNFVKTMLRLAADRDEISVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AI+ A L N D + G +H+ A G +W++FA +I S GG Sbjct: 181 WGNPTSALDIADAILHAAAMLHRNEDLAAFGTYHL-AGTGEANWSEFARHILDTSLAFGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG----VRNILVN 289 +++V I T YPTKA RPA S L +K A+ + W++ VR +LV+ Sbjct: 240 HWARVRDIATMDYPTKARRPANSRLSSAKFASAFGWKAPDWRQSAETVVRRLLVD 294 >gi|315499261|ref|YP_004088065.1| dtdp-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48] gi|315417273|gb|ADU13914.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48] Length = 299 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 139/291 (47%), Positives = 190/291 (65%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G GQ+ SL S+ +E+IRVG P+IDL KP+ A + PDVII+ AA Sbjct: 1 MRIVVTGKEGQVDTSLQSLGEALGLEVIRVGLPEIDLSKPETLAEPIKAARPDVIISSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+A +IN +G GA+AK A + IP +++STDYVF G E Sbjct: 61 YTAVDKAESETELAQAINGDGPGALAKIAAELDIPLLHLSTDYVFAGDKDGIYTESDAPG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG +KL+GE ++A+ T N+VILRTAWVYS +G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVSVYGMTKLSGETQIAAATANHVILRTAWVYSPYGNNFVKTMLRLGETRDELNVVADQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +IARA++ IA + ++ D LRGIFH+T G +WA FAE IF SA RGG Sbjct: 181 GCPTYAPEIARALLHIAQRVSKDPDPKLRGIFHLTGQ-GETTWAGFAEVIFEGSALRGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T+ YPT A RPA S L KLA +++R+ W+ + + L + Sbjct: 240 AVKVTPIPTEAYPTPAKRPANSRLSGEKLAEVYDLRLDPWRVSLDDCLTRL 290 >gi|86357151|ref|YP_469043.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42] gi|86281253|gb|ABC90316.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42] Length = 295 Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/291 (51%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + ++I VGRP++DL P A+ F + DVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGLDISAVGRPEMDLSDPASVAAAFSALRADVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I++STDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVPVIHLSTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRLA+ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGNNFLKTMLRLAETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA +I + + SLRG FH+T G SWADFAE IF E + GG Sbjct: 181 GCPTSALDIADAILAIATRIITDPEPSLRGTFHLTGS-GEASWADFAEEIFAELLKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 SVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 290 >gi|327188679|gb|EGE55882.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512] Length = 295 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 151/291 (51%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQI QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQIVQSLLRRGAETGVEIIAVGRPEMDLSDPASVAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE E E+AFS+NA GAGAIA+AA IG+P I++STDYVF G + E T Sbjct: 61 YTGVDKAESEAELAFSVNAAGAGAIAEAAARIGVPVIHLSTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGTFHLTGS-GEASWADFAEAIFAALLKSGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLATTYGIRLPEWKQSMTIVMQDL 290 >gi|190891197|ref|YP_001977739.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 652] gi|190696476|gb|ACE90561.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CIAT 652] Length = 295 Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 151/291 (51%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASVAAAFSAQRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGAIA+AA IG+P I++STDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAIAEAAARIGVPVIHLSTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGTFHLTGS-GEASWADFAEAIFAALLKSGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLATTYGIRLPEWKQSMTIVMQDL 290 >gi|110635097|ref|YP_675305.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium sp. BNC1] gi|110286081|gb|ABG64140.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1] Length = 295 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 137/289 (47%), Positives = 176/289 (60%), Gaps = 3/289 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G NGQ+A+SL + + RP++DL P+ A +PD+++N A Sbjct: 1 MKILVTGKNGQLARSLLDRAARHPHLALDFAARPELDLADPRTIAPAIARHAPDLVVNAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEPE+A ++N AG IA+A + GIP I+ISTDYVFDG P E P Sbjct: 61 AYTAVDQAEDEPELAHAVNGAAAGLIARATAARGIPLIHISTDYVFDGALARPYREEDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL++YG SKLAGE V +++ILRTAWVYS +G NFL +ML+LA+ R EI VVCDQ Sbjct: 121 NPLSVYGASKLAGERAVREQNPDHLILRTAWVYSPYGRNFLKTMLKLAEARDEIRVVCDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSA IA I+ A +H+ A G SW +FA +IF ESA RGG Sbjct: 181 IGNPTSAHDIAGGILAAAEARRVQGTRGWGKTYHL-AGSGEASWHEFAAHIFEESARRGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++V I T+ YPTKA RP S L C + A+ R W+E V +L Sbjct: 240 PSARVTPIATEDYPTKAVRPRNSRLCCDRFADAFGYRAPAWREAVVELL 288 >gi|39933196|ref|NP_945472.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39652821|emb|CAE25563.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 297 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 144/286 (50%), Positives = 196/286 (68%), Gaps = 3/286 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G +GQ+AQ+L + EI+ + RP+IDL + D + + PD ++N AA Sbjct: 1 MRIVVTGRHGQVAQALYERAAGTNAEIVLLSRPEIDLTRQSDIETALSAVKPDAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE EP++A++INAEGAGA+A+AA +G+P + +STDYVFDG + P E PTN Sbjct: 61 YTAVDQAESEPDLAYAINAEGAGAVARAAAKLGVPMVQLSTDYVFDGTAEQPYRETDPTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SKLAGE VA T ++ +LRT+WVYS FG NF+ +ML LA++R E+ VV DQ Sbjct: 121 PLSVYGASKLAGERAVAKATPDHAVLRTSWVYSPFGKNFVRTMLALARQRDEVRVVWDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI-ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PTSAL IA ++ + NL+ E + + LRGIFHMTADG +WA FAE IF S GG Sbjct: 181 GSPTSALDIADGVLGVVRNLLAEPTRSDLRGIFHMTADGT-ATWAAFAEAIFAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P +KV I T +YPT A RP S LD S LA H IR+ W++ ++ Sbjct: 240 PSAKVIPIPTTEYPTPAKRPTNSRLDSSALAAAHGIRLPHWRQSLQ 285 >gi|323135558|ref|ZP_08070641.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242] gi|322398649|gb|EFY01168.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242] Length = 299 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 133/290 (45%), Positives = 175/290 (60%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ V G GQ+ +L DVE+I +GRP DL + D I+N AAY Sbjct: 6 LRLAVTGLTGQVVSALIERAPNDVEMIALGRPQFDLGVRDAVLATLRQTGCDAIVNAAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP++A +N EGAG +A+AA +G+P +++STDYVFDG P E PT P Sbjct: 66 TAVDKAESEPDVAMRVNGEGAGNVAEAAAELGVPLLHLSTDYVFDGARDRPYREDDPTGP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG+SKLAGEEK+A+ N+ ILRTAWVYS FG+NF+ +MLRL + R E+ VV DQ G Sbjct: 126 TGAYGRSKLAGEEKIAAIHPNHAILRTAWVYSPFGANFVKTMLRLGETREEVGVVADQLG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A+ IA A+I IA L + LRG+FHMT G +WADFAE F + G Sbjct: 186 NPTNAIDIADALIVIARRLAADPSPELRGVFHMTGQ-GEATWADFAESTFAIAERFGRKP 244 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V RI T YPT A RPA S LD +KL + + W+ + N + + Sbjct: 245 VRVKRITTADYPTPARRPANSRLDNTKLNERFGVALPLWRASLENCVARL 294 >gi|86748689|ref|YP_485185.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris HaA2] gi|86571717|gb|ABD06274.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris HaA2] Length = 298 Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 139/284 (48%), Positives = 184/284 (64%), Gaps = 2/284 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+A+SL D++I+ + RP++DL +P+ A + PD ++N AAY Sbjct: 1 MRLAVTGRHGQVARSLLERAPADIDIVPLARPEVDLQQPRAVAEAMAAARPDAVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A IN GAGA+A AA +GIP +++STDYVFDG P E T P Sbjct: 61 TAVDLAETEAELAHRINEAGAGAVAAAAARLGIPVVHLSTDYVFDGSLSRPYREDDETGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE VA+ ++ ILRTAWVYS FG NF+ +ML LA+ R E+S+VCDQ G Sbjct: 121 LGVYGASKLAGERAVAAGNPDHAILRTAWVYSPFGKNFVRTMLTLAETRDELSIVCDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 P+ AL IA I + NL+ D +LRG+FHMT G WA FAE IF SA+ GGP Sbjct: 181 APSYALDIADGIFTVVRNLLARPDDAALRGVFHMTGRGD-TDWAGFAEAIFACSADAGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++V RI T YPT A RPA S LD ++LA H +R+ W++ + Sbjct: 240 AARVKRIATSDYPTAARRPANSRLDTARLAARHGVRLPDWRDSL 283 >gi|91976052|ref|YP_568711.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] gi|91682508|gb|ABE38810.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] Length = 298 Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 142/282 (50%), Positives = 180/282 (63%), Gaps = 2/282 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G GQ+ QSL D++I+ + RP +DL P A + PD +I+ AAY Sbjct: 1 MRLAVTGRVGQVVQSLLERAPADIDIVTIARPAVDLQDPVAVAEAIGAARPDAVISAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A+ IN GAGA+A AA +GIP +++STDYVFDG P E P Sbjct: 61 TAVDLAEKEAELAYRINEAGAGAVATAAADLGIPVVHLSTDYVFDGSLSRPYREDDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAGE VA+ ++ ILRTAWVYS FG NF+ +ML LA R E+SVVCDQ G Sbjct: 121 LSVYGASKLAGERAVAAANPDHAILRTAWVYSPFGKNFVRTMLMLADSRAEVSVVCDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT AL IA ++ +A NL+ SD +LRG+FHM+ G SWA FAE IF SA GGP Sbjct: 181 APTCALDIADCVVAVARNLLARPSDGALRGVFHMSCTGE-TSWAGFAEAIFAHSAAAGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 ++V I T +YPT A RPA S LD S+LA H IR+ W + Sbjct: 240 SARVKPIATSEYPTPARRPANSRLDTSRLAERHGIRLPNWTD 281 >gi|218660971|ref|ZP_03516901.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli IE4771] Length = 292 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 147/275 (53%), Positives = 184/275 (66%), Gaps = 2/275 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNATGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEVDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA +I+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADSILAIATRIVADPAPSLRGTFHLTGS-GEASWADFAEEIFAALLKFGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 V RI T YPT A RPA S L+ KLA T+ I Sbjct: 240 NVGVERIPTTDYPTPAKRPANSRLNGDKLARTYGI 274 >gi|158605288|gb|ABW74898.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. ATCC 53159] Length = 288 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/287 (46%), Positives = 184/287 (64%), Gaps = 4/287 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQSL+ V E++ P+ DL KP+ + PD+I++ AAY Sbjct: 1 MRILVTGHDGQVAQSLAEQAVGH-ELVFTTYPEFDLSKPETIEAGVARVHPDLIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A +IN +G G +A+A IG P I++STDYVFDG P E PT P Sbjct: 60 TAVDKAESEPELAMAINGDGPGVLARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ+G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALNVVEDQWG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+ + + ++ TS G++H A G +WADFA IF ESA+RGGP Sbjct: 180 CPSSALDIATAILTVVGHWQQDGATS--GLYHF-AGTGETNWADFASTIFAESAKRGGPS 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I + YPT A RPA S LDC++ A T R W++ + +L Sbjct: 237 ATVTGIPSSGYPTPATRPANSRLDCTRFAETFGYRAPAWQDSLNVVL 283 >gi|13476274|ref|NP_107844.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mesorhizobium loti MAFF303099] gi|14027035|dbj|BAB53989.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mesorhizobium loti MAFF303099] Length = 292 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/291 (44%), Positives = 181/291 (62%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G +GQ+ SL + V++I +GRP +DL P + PD++++ AA Sbjct: 1 MRLAVTGRDGQVVSSLLEAGQFAGVDVIAIGRPQLDLANPDTVIEAIAAARPDIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AEDEP++AF +NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 YTAVDQAEDEPDLAFRVNAVGAGKVAQAAARLGVPVIHLSTDYVFDGSASGAYVETDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SKLAGE+ VA+ ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ+ Sbjct: 121 PASVYGASKLAGEQTVAAAGPRHLILRTAWVYSPFGKNFVKTMLRLAADRDEISVVADQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G P+SAL IA AI+ A L N D G +H+ A G +W+ FA +I S GGP Sbjct: 181 GNPSSALDIADAILHAAATLHRNKDFGAFGTYHL-AGTGETNWSGFARHILDTSRVSGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V+ I T YPTKA RPA S L +K A+ W++ ++ + Sbjct: 240 SARVHDIMTTDYPTKARRPANSRLSSAKFASAFGWTAPDWRQSTEAVVRRV 290 >gi|1314582|gb|AAC44075.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. S88] Length = 288 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 131/287 (45%), Positives = 182/287 (63%), Gaps = 4/287 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQ+L + E+I P+ DL KP+ + P++I++ AAY Sbjct: 1 MRILVTGHDGQVAQALGEQA-EGHELIFTSYPEFDLSKPETIEAAVAKIQPELIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A +IN +G G +A+A IG P I++STDYVFDG P E PT P Sbjct: 60 TAVDKSESEPELAMAINGDGPGVLARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDTLNVVEDQQG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+++ + +N TS G++H T G +WADFA IF ESA+ GGP Sbjct: 180 CPSSALDIATAILKVVGHWQQNGATS--GLYHFTGS-GETNWADFARAIFAESAKHGGPT 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V I T YPT A RPA S L+C K A T R W++ V ++ Sbjct: 237 AEVTGIPTSGYPTPAKRPANSRLNCDKFAETFGYRAPAWQDSVAEVV 283 >gi|209548785|ref|YP_002280702.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534541|gb|ACI54476.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 295 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 149/291 (51%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + ++I VGRP++DL P+ A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGIDISAVGRPEMDLANPESIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGAPVIHISTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGEE VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEEAVAAANPNHVILRTAWVYSPFGTNFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIAARVVADPAPSLRGTFHLTGS-GEASWADFAEAIFAELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ +R+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLARTYGLRLPEWKQSMTIVMQDL 290 >gi|153010043|ref|YP_001371258.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum anthropi ATCC 49188] gi|151561931|gb|ABS15429.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum anthropi ATCC 49188] Length = 292 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 137/292 (46%), Positives = 180/292 (61%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G GQ+ QSL Q D+E+I +GRP++DL KP S + PD++++ A Sbjct: 1 MKILVTGREGQVVQSLLEKAAQRSDLEVIALGRPELDLAKPDTVRSAIAAIKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AED E+AF+ NA GA +A+AA + G P I++STDYVF G + P E T Sbjct: 61 AYTAVDLAEDNKELAFAANATGAEVVAEAAKACGAPVIHLSTDYVFAGDADEPYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE VA ++I+RTAWVYS FG NF+ +ML+LA+ R +SVV DQ Sbjct: 121 GPRGVYGSSKLEGERLVAQSNPQHIIMRTAWVYSPFGKNFVKTMLKLAETRDALSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AIIQ+A +L D S G++H+ G +W+ FA IF ESA GG Sbjct: 181 WGNPTSALDIADAIIQVADHLAATPDFSAYGVYHLVGMGN-TNWSSFARAIFDESATLGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I T YPTKA RPA S L +K N WK +R+++ + Sbjct: 240 PTANVTDITTADYPTKAVRPANSRLSTAKFQQVFNWSAPHWKSSLRDVVARL 291 >gi|32170825|gb|AAP57701.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas elodea] Length = 288 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/287 (45%), Positives = 179/287 (62%), Gaps = 4/287 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQSL Q E+I P+ DL +P+ + P++I++ AAY Sbjct: 1 MRILVTGHDGQVAQSLGEQA-QGHELIFTSYPEFDLSRPETIEAAVAKIQPELIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A +IN +G G +A+A IG P I +STDYVFDG P E PT P Sbjct: 60 TAVDKSESEPELAMAINGDGPGVLARAGAKIGAPIIQLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALNVVEDQQG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+ + D + G++H A G +WADFA IF ESA+RGGP Sbjct: 180 CPSSALDIASAILAVVERW--QRDGAFSGVYHF-AGSGETNWADFARAIFAESAKRGGPT 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I + YPT A RPA S LDCS+ A+T R W++ + ++ Sbjct: 237 ATVTGIPSSDYPTPAKRPANSRLDCSRFADTFGYRAPAWQDSLAVVM 283 >gi|92118530|ref|YP_578259.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] gi|91801424|gb|ABE63799.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] Length = 307 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/285 (45%), Positives = 176/285 (61%), Gaps = 3/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G +GQ+A+ L ++ ++ ++ VGRP++DL + D A + SP IIN AAYTA Sbjct: 13 LVVGKSGQLARCLQEAAIRRNLALVSVGRPELDLERGDDLAETVTAMSPAAIINAAAYTA 72 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE EP+ A+ +N + AG +A A GIP I++STDYVFDG +P E T PLN Sbjct: 73 VDRAEAEPKRAYRVNRDAAGRMAAVAREQGIPFIHVSTDYVFDGRKHSPYREDDQTGPLN 132 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL GE V ++LRTAWVYS +G NF+ ++LRL+ + + VV DQ+G+P Sbjct: 133 VYGRSKLEGEAAVLKVDPGAIVLRTAWVYSPYGQNFVRTILRLSATQPAVLVVSDQYGSP 192 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TSAL +A AI+ I H S+ GI+H+TA G VSW DFA IF + A RG P Sbjct: 193 TSALDLAEAILTIVHQ-ARADHGSVGGIYHLTAQGD-VSWHDFATAIFEQLARRGLPVPD 250 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A RPA S LDCSK A +R+ W + L Sbjct: 251 LQAIITDDYPTPARRPANSRLDCSKAAQVFGVRLPHWHSSLEECL 295 >gi|16519749|ref|NP_443869.1| dTDP-4-dehydrorhamnose reductase RmlD [Sinorhizobium fredii NGR234] gi|2500165|sp|P55463|RMLD_RHISN RecName: Full=Probable dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|2182409|gb|AAB91681.1| dTDP-4-dehydrorhamnose reductase RmlD [Sinorhizobium fredii NGR234] Length = 296 Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 137/287 (47%), Positives = 182/287 (63%), Gaps = 1/287 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQIA +L + DVEI+ +GRP+ DL AS +PD+I++ AAY Sbjct: 1 MRLAVTGKNGQIALALKAQARPDVEILTLGRPNFDLACRSTVASSIRDAAPDIIVSLAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP AF++N +G A+A+AA +G+P I++STDYVFDG P E T P Sbjct: 61 TAVDKAESEPYEAFAVNRDGVQALAEAAAGLGVPVIHLSTDYVFDGAKPVPYCEEDRTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SKL GE VAS N+ ILRT+WVYS +G NF+ MLRLA E++VV DQ G Sbjct: 121 ISVYGRSKLEGEFAVASANPNHTILRTSWVYSRYGQNFVKKMLRLADTNDELNVVADQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA I+ A++ IA ++ +S LRGIFH++ G SWA FA+Y+F E G Sbjct: 181 CPTSADDISVAVMTIARRMLSSSSADLRGIFHLSG-SGEASWAAFAKYVFSVYDEITGRQ 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV+ I +YPT A RPA S L C KL T IR+ W+E R ++ Sbjct: 240 IKVHDISAAEYPTPARRPANSRLHCDKLERTFGIRLPNWEESTRRLV 286 >gi|154247482|ref|YP_001418440.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] gi|154161567|gb|ABS68783.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] Length = 297 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 142/288 (49%), Positives = 191/288 (66%), Gaps = 2/288 (0%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G GQ+ SL VE+I +GRP++DL S + +PD I++ AA Sbjct: 1 MRLIVTGKQGQVVSSLLERGPAASVEVIALGRPELDLADAASVRSAIAAAAPDAIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++AF++N GAGA+A+AA ++G+P I++STDYVF G P E PT Sbjct: 61 YTAVDKAECEPDLAFAVNETGAGAVAEAAGALGVPVIHLSTDYVFAGDKADPYVETDPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG SKLAGE+KVA+ T+N+ ILRTAWVYS FG+NFL +MLRL + R + VV DQ Sbjct: 121 PVSVYGASKLAGEKKVAAATDNHAILRTAWVYSPFGANFLKTMLRLGESRDVLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPTSAL IA A+I +A L + D +LRG+FH+T GG +WADFA+ IF E+ G Sbjct: 181 GTPTSALDIADAVIAVARRLKADPDPALRGVFHLTG-GGEGTWADFADAIFGGLKEKTGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV RI T YPT A RPA S L KL +++ I ++ W R ++ Sbjct: 240 EVKVERITTADYPTPARRPANSRLSTKKLQSSYGIVLADWDASTRGVV 287 >gi|241203188|ref|YP_002974284.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857078|gb|ACS54745.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 297 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 133/290 (45%), Positives = 180/290 (62%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+ +L ++ V +EII +GRP++DLL+P + PDV+++ AAY Sbjct: 1 MRIAVTGKSGQVTSALQALNVPGIEIIAIGRPELDLLEPSMVSEIIAKIKPDVVVSSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF+IN +GA AIA A + +P I++STDYVFDG E P P Sbjct: 61 TAVDKAESDEAAAFAINRDGAKAIAAATAELSLPVIHLSTDYVFDGDKPECYVESDPVGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SKL GE VA+ N+VILRTAWVYS FG NF+++MLRLA+ R E+SVV DQ G Sbjct: 121 VSVYGRSKLEGEYAVAAANENHVILRTAWVYSTFGHNFVITMLRLAETREELSVVSDQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA AI++IA L +S LRG+ H+ A G S A FA YI E+ G Sbjct: 181 CPTSAGDIAGAIVKIAGRLSNDSTPDLRGVCHL-AGSGETSCAGFARYILSIHEEKTGRR 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L C KL + +++ + W+ R + + Sbjct: 240 VTVKDIATADYPTAAKRPANSRLCCDKLKSLYSVSMPEWRISARAAVTKL 289 >gi|186684650|ref|YP_001867846.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186467102|gb|ACC82903.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 296 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 131/290 (45%), Positives = 173/290 (59%), Gaps = 8/290 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+IG+NGQ+ + L + +II V RP +DL +P S S P +IIN AAYTAV Sbjct: 6 LLIGSNGQVGKELQQILPSYGDIISVARPTVDLAQPDTLRSIIRSKQPQIIINAAAYTAV 65 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE EPE+A +INA IA+ + +G I+ISTDYVFDG P E TNPL++ Sbjct: 66 DKAESEPELASAINATAPLIIAQESQKLGAFLIHISTDYVFDGNGYRPYQETDATNPLSV 125 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFGTP 182 YGK+KLAGEE + +++ILRTAWVY FG SNF+ +MLRL ER+E+ VV DQ G+P Sbjct: 126 YGKTKLAGEEAIRETCAHHLILRTAWVYGTFGKSNFVKTMLRLGAERQELRVVADQIGSP 185 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY-- 240 T A IA I Q L + G +H T + G SW DFA IF E+ + G P Sbjct: 186 TWAQDIATVIAQTIPQLTPK----IGGTYHYT-NSGVASWYDFAVAIFEEAQQLGFPLKV 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +YPT A RPAYS L C K++ S W++ +R +L ++ Sbjct: 241 EHIVPITTAEYPTPARRPAYSVLACGKISAIVGTYPSHWRQRLRQMLADL 290 >gi|307320267|ref|ZP_07599686.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] gi|306894146|gb|EFN24913.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] Length = 309 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 128/292 (43%), Positives = 179/292 (61%), Gaps = 7/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G GQ+ SL + +DVE+ +GRP+ DL +P ++ PD++I+ A Sbjct: 1 MRVLVTGTTGQLVTSLREVAAGSRDVELFAIGRPEFDLTRPIPMREAIIAARPDIVISAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT+VD+AEDEP +A ++N GA +A+AA S+ IP I++S+DYVF G RTP E T Sbjct: 61 AYTSVDRAEDEPALARAVNVMGAACVAEAAASLDIPVIHLSSDYVFSGDDRTPRREDDET 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG +KLAGEE VAS T ++ILRT+WVYS FG+NF+ +MLRLA + +SVV DQ Sbjct: 121 GPRTVYGATKLAGEEAVASITARHIILRTSWVYSPFGTNFVKTMLRLASAQERLSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL +A AI+ IA ++ G +H+T G +W+ FA ++ S GG Sbjct: 181 YGNPTSALDVAAAILLIATQPRQDR----FGTYHLTGT-GESNWSGFARHVLAVSRLHGG 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I T YPTKA RP S L +K A T R+ W+ ++ I Sbjct: 236 PSAIVDDIATADYPTKARRPRDSRLCTNKFAGTFGWRLPDWQTSTETVVARI 287 >gi|170724102|ref|YP_001751790.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169762105|gb|ACA75421.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 286 Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 179/290 (61%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+NGQ+AQ+L + E+ +GR +DL +P+ +P++IIN AAY Sbjct: 1 MRVLVCGHNGQVAQALKTQLAGLGEVHLLGRDQLDLAQPEALREPLRQLAPELIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ AF+INA+ G +A+ A +G P I+ STDYVFDG P E NP Sbjct: 61 TAVDQAESEPDTAFAINAQAPGVLAEEALRLGAPLIHYSTDYVFDGEKAAPYTEQDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SKLAGE+ +A+ ++ILRT+WVYS+ G NFLL+M RL +E+ ++ VV DQ G Sbjct: 121 LGVYGRSKLAGEQAIAAVGGAHLILRTSWVYSLHGRNFLLTMQRLLQEKPQLRVVNDQIG 180 Query: 181 TPTSALQIA---RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT A IA RA+I+ + G +H+TA G SW FA+ I + RG Sbjct: 181 APTWASTIALSTRALIE----RWQAGRAGAWGTYHLTAQ-GQTSWFGFAQAIGEQLKARG 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +++ I + +YPT A RPA S LDCS+LA ++ + W++ + + L Sbjct: 236 LPCAELLPIPSSEYPTPARRPANSRLDCSRLAREWDVTLPHWQQALIDCL 285 >gi|17231982|ref|NP_488530.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120] gi|17133626|dbj|BAB76189.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120] Length = 294 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/288 (45%), Positives = 173/288 (60%), Gaps = 9/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G+NGQ+ Q + ++ +II V RP IDL + P +IIN AAYTA Sbjct: 5 ILLLGSNGQVGQEIQNLLAPRYKIISVARPRIDLTQADSLRQIIREVQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPEIA +INA IA+ + +G I+ISTDYVFDG P E PTNPL+ Sbjct: 65 VDKAETEPEIATAINATAPQIIAEESQKLGSFLIHISTDYVFDGQQSHPYQETDPTNPLS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE + +++ILRTAWVY FG SNF+ +MLRL ER+EI VV DQ G+ Sbjct: 125 VYGKTKLAGEIAIQQTHPHHIILRTAWVYGSFGKSNFVKTMLRLGAERQEIRVVKDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA I Q+ + E S G +H T + G +SW +FA IF ES + G P + Sbjct: 185 PTWAQDIADTIAQVIPQIPEIS-----GTYHYT-NTGVISWYEFAVAIFAESQKLGFPLT 238 Query: 242 --KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T +YPT A RPAYS L C K++ W++ +R +L Sbjct: 239 VQQIIPITTAEYPTLAPRPAYSVLACEKMSQVLGTAPPHWQQRLRLML 286 >gi|119485671|ref|ZP_01619946.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106] gi|119456996|gb|EAW38123.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106] Length = 293 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 126/290 (43%), Positives = 171/290 (58%), Gaps = 8/290 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+IG +GQ+ Q L + EI VGR +DL P+ A PD+I+N AAYTAV Sbjct: 5 LLIGKDGQLGQELQQVLAPLGEIKSVGRDSLDLANPEAIAKMVAEVKPDLIVNAAAYTAV 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E +A +IN+ G +AK A IG I++STDYVFDG P E PT PL + Sbjct: 65 DKAETEQNLAQAINSTAPGILAKQAQEIGATLIHVSTDYVFDGSQSHPYLETDPTQPLGV 124 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGE+ + S N I+RTAWVY + G NF+ +MLRL ER E+ VVCDQ G+P Sbjct: 125 YGQSKLAGEQAILSTQANAAIVRTAWVYGVGGKGNFVKTMLRLGAEREELRVVCDQVGSP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY-- 240 T +A AI+Q++ + + + GI+H T + G SW DFA IF E+ + G P Sbjct: 185 TWTGDLAEAIVQLSQQI----NPEIAGIYHYT-NSGVTSWYDFAIAIFEEAKQLGFPLKI 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+ K++ W++ +R +L + Sbjct: 240 QRVVPISTAEYPTPARRPAYSVLNTQKISAILGSYPPHWRQSLRKMLSKL 289 >gi|75909561|ref|YP_323857.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703286|gb|ABA22962.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413] Length = 296 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/288 (45%), Positives = 169/288 (58%), Gaps = 9/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG NGQ+ Q + + ++I RP IDL + P +IIN AAYTA Sbjct: 5 ILLIGGNGQVGQEIHQILAPKYKVISAARPRIDLTQADSLRQIIQEVQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPEIA +INA IA+ + +G I+ISTDYVFDG P E PTNPL+ Sbjct: 65 VDKAETEPEIATAINATAPQIIAEESQKLGSFLIHISTDYVFDGQQSHPYQETDPTNPLS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE + ++ILRTAWVY FG SNF+ +MLRL ER+EI VV DQ G+ Sbjct: 125 VYGKTKLAGEIAIQQTHPQHLILRTAWVYGSFGKSNFVKTMLRLGAERQEIRVVKDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA I Q+ + E + G +H T + G +SW DFA IF ES + G P + Sbjct: 185 PTWAQDIADTIAQVIPQIPE-----ISGTYHYT-NTGVISWYDFAVAIFAESQKLGFPLT 238 Query: 242 --KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T +YPT A RPAYS L C K++ W+E +R +L Sbjct: 239 VQQIIPITTAEYPTLAPRPAYSVLACEKMSQVLGTAPPHWQERLRLML 286 >gi|291568777|dbj|BAI91049.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis NIES-39] Length = 292 Score = 234 bits (598), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 170/290 (58%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIKPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY G+ NF+ +MLRL++ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLSREREELRVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+Q+ L NS+TS GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVQLIPQL--NSETS--GIYHYT-NSGVTSWYDFAIAIFEEAKLLGVP 235 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPAYS L+ KLA W+ G+R +L Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTML 285 >gi|284051015|ref|ZP_06381225.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str. Paraca] Length = 292 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 130/290 (44%), Positives = 169/290 (58%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIKPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY G+ NF+ +MLRL +ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLGREREELRVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+Q+ L NS+TS GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVQLIPQL--NSETS--GIYHYT-NSGVTSWYDFAIAIFEEAKLLGVP 235 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPAYS L+ KLA W+ G+R +L Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTML 285 >gi|239831407|ref|ZP_04679736.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum intermedium LMG 3301] gi|239823674|gb|EEQ95242.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum intermedium LMG 3301] Length = 292 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 137/292 (46%), Positives = 185/292 (63%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK V G GQ+ QSL Q D+E+I +GRP++DL +P S + PDV+++ A Sbjct: 1 MKIAVTGREGQVVQSLLEKASQRADLEVIALGRPELDLAEPGTVRSAIEAIKPDVVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AEDE E AF++NA GAGA+A+AA++ G+P I++STDYVF G + P E T Sbjct: 61 AYTAVDLAEDEQEHAFAVNAAGAGAVAQAAENCGVPVIHLSTDYVFAGDADKPYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKL GE VA ++ILRTAWVYS FG NF+ +ML+LA+ R +SVV DQ Sbjct: 121 GPRSVYGSSKLEGERLVAQANPQHIILRTAWVYSPFGKNFVKTMLKLAETRDALSVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AII++A +L + S G++H+ A G +W+ FA IF ESA GG Sbjct: 181 WGNPTSALDIADAIIRVADHLAAAPEFSAYGVYHL-AGTGDTNWSGFARAIFGESARLGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T YPTKA RPA S L +K N W+ +R+++ + Sbjct: 240 ATATVTDIATADYPTKARRPANSRLSTAKFQQAFNWSAPHWQSSLRDVVSRL 291 >gi|209526054|ref|ZP_03274587.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] gi|209493580|gb|EDZ93902.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] Length = 292 Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 129/293 (44%), Positives = 169/293 (57%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIQPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY G+ NF+ +MLRL ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLGGEREELKVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+++ L NS+TS GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVRLIPQL--NSETS--GIYHYT-NSGVTSWYDFAIAIFEEAKLLGLP 235 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+ KLA W+ G+R +L + Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTMLTTL 288 >gi|254416235|ref|ZP_05029989.1| dTDP-4-dehydrorhamnose reductase [Microcoleus chthonoplastes PCC 7420] gi|196176917|gb|EDX71927.1| dTDP-4-dehydrorhamnose reductase [Microcoleus chthonoplastes PCC 7420] Length = 295 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 170/293 (58%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ L E++ V R +DL +P F PD+I+N AAY Sbjct: 2 MRILLTGMAGQLGSELQQTLAPLGEVMGVDRQGLDLTQPDKIRQVIGEFKPDMIVNAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A +IN +A+AA +G I++STDY+FDG TP E +P Sbjct: 62 TAVDKAETETELANAINGTAPTIMAEAAQQLGAALIHVSTDYIFDGKKNTPYTEDDKPDP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQF 179 +N YG+SKL GEE V + + +ILRTAWVY ++G NF+ +MLRL ER E+ VV DQ Sbjct: 122 INAYGQSKLLGEEGVLKHCDRALILRTAWVYGVYGKGNFVKTMLRLGAEREELRVVVDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI Q+ L SDT L GI+H T + G +SW DFA IF E+ E G P Sbjct: 182 GTPTWTGDLASAIAQLVQYL--KSDT-LTGIYHFT-NSGAISWYDFAVAIFEEAQEIGFP 237 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ S W+ G+R +L + Sbjct: 238 LQVKRVVPITTAEYPTAAARPAYSVLSTRKISAVVGNHPSHWRTGLRRMLKQL 290 >gi|288963205|ref|YP_003453484.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] gi|288915457|dbj|BAI76940.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] Length = 296 Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 179/288 (62%), Gaps = 3/288 (1%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV+G+NGQ+ + + + D EI+ + P+ D+ +P D + +PD+++N A Sbjct: 1 MKILVLGSNGQLGFELMRANWAPDTEIVGLPYPEFDVTRPGDVEKAVATHAPDLLVNATA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAE E E++F++N +G GA+A A + GIP I++STDYVFDG E P N Sbjct: 61 HTAVDKAESEVELSFAVNRDGPGAMAAACAARGIPFIHVSTDYVFDGTKDGLYSEDDPIN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK AGEE V + ++VILRT+WVYS +G+NF+ +MLR KER E+ VV DQ Sbjct: 121 PLGVYGASKAAGEEAVRRASPHHVILRTSWVYSAYGNNFVKTMLRFGKEREEMRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A +A AI+QIA IE + ++ G +H+T G +W FAE+IF ER G Sbjct: 181 GSPTAAADLAAAIVQIA-GTIETTGSAAWGTYHLTGSGY-TTWHGFAEHIFRRLEERTGK 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T YPT A RPA S LDCS + W++ + ++ Sbjct: 239 RPRLTAIGTADYPTPARRPANSRLDCSGAKERLGVSCPPWQDSLDRVI 286 >gi|104779534|ref|YP_606032.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas entomophila L48] gi|95108521|emb|CAK13215.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Pseudomonas entomophila L48] Length = 286 Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 170/290 (58%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+AQ+L E++ +GR +DL +P+ PD+IIN AA+ Sbjct: 1 MKILVCGRNGQVAQALQGALDGHGEVLSLGRDRLDLARPEALREPLRQLKPDLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++AF+INAE +A+ A +G P I+ STDYVFDG T +E TNP Sbjct: 61 TAVDQAESEAQLAFAINAEAPRVLAEEAARLGAPLIHYSTDYVFDGTKATAYNEDDATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ +A ++ILRT+WVYS+ G NFLL+M +L +ER ++ VV DQ G Sbjct: 121 LGVYGSSKLAGEQAIAKVGGEHLILRTSWVYSLQGRNFLLTMQKLLQERPQLKVVDDQVG 180 Query: 181 TPTSALQIA---RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT A IA RA+++ G +H+TA G SW FA I + RG Sbjct: 181 APTWAATIAASTRALVE----RWRQGQAGAWGTYHLTAQ-GETSWYGFALAIGEQLKARG 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +++ I + +YPT A RP S LDCS+LA + W E + + L Sbjct: 236 LPCAELLPIPSSEYPTPAKRPLNSRLDCSRLAREWQVSQPHWHEALIDCL 285 >gi|119513383|ref|ZP_01632416.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nodularia spumigena CCY9414] gi|119461962|gb|EAW42966.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nodularia spumigena CCY9414] Length = 294 Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 126/287 (43%), Positives = 167/287 (58%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G+NGQ+ Q L + +II + RP IDL +P + P +IIN AAYTAV Sbjct: 6 LLLGSNGQVGQELEKILSPKHKIIPLARPKIDLTQPDNLRQIIREIQPQIIINAAAYTAV 65 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE EPE+A +INA+ IA+ + +G I+ STDYVFDG P E TNPL + Sbjct: 66 DKAETEPELATAINAKAPQIIAEESQKLGCFLIHFSTDYVFDGQQTRPYQETDRTNPLGV 125 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGTP 182 YG++K AGE + +++ILRTAWVY FG NF+ +MLRL KER EI VV DQ G+P Sbjct: 126 YGQTKRAGEIAIEQTHPHHIILRTAWVYGTFGKGNFVKTMLRLGKERSEIGVVTDQIGSP 185 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS- 241 T A IA AI I I + G +H T + G +SW DFA IF E+ G P + Sbjct: 186 TWAQDIADAIAHI----IPQLTPEIAGTYHYT-NSGVISWYDFAVAIFAEAQHLGFPLTP 240 Query: 242 -KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPAY L C K++ W++ +R +L Sbjct: 241 PQVIPITTAEYPTLARRPAYPVLACGKISQLLGTYPPHWRQRLRLML 287 >gi|150376941|ref|YP_001313537.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] gi|150031488|gb|ABR63604.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] Length = 306 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 125/289 (43%), Positives = 179/289 (61%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L G GQ+ L+ + V+ DVE+I +GRP+ DL+ P ++ SPDV+++ A Sbjct: 1 MKVLATGTTGQVVTCLTEIAVRLGDVELITIGRPEFDLINPVPLREAIVAASPDVVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP A ++N GA +A+AA +G+P I++STDYVF G P E T Sbjct: 61 AYTAVDRAEDEPARARAVNVAGAACVAEAAARLGVPLIHLSTDYVFSGDDPGPRKENDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE+ VAS T +VILRT+WVYS FG+NF+ ++LRLAK R +SVV DQ Sbjct: 121 RPRTLYGASKLDGEKAVASITPRHVILRTSWVYSPFGTNFVRTILRLAKSREILSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSAL +A AI++IA + ++ G++H+ GG +W+DFA +I S GG Sbjct: 181 HGNPTSALDLAAAILEIARSRKGDA----FGVYHLAGTGG-TNWSDFARHILAVSHLNGG 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P++ + I + YPT+A RP S L K + W++ + ++ Sbjct: 236 PFATIRGIASADYPTRARRPQDSRLCTDKFEGIFGWCLPPWQDSTKLVV 284 >gi|261856084|ref|YP_003263367.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2] gi|261836553|gb|ACX96320.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2] Length = 306 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 170/291 (58%), Gaps = 8/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIINPA 58 CL++G+ GQ+A L +I R IDL + DF S P+ I+N A Sbjct: 8 CLILGDQGQVAYELKRELATLGRVIAASRSTLPVAIDLAQHNDFESLIRQTKPNCIVNAA 67 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE EPE+A INAE +A+AA IP I+ STDYVFDG ++ P E PT Sbjct: 68 AYTAVDKAEQEPELAMRINAEAVAELAQAAAKANIPLIHYSTDYVFDGTAQQPYQEDQPT 127 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE+ +A+ N++ILRT+WVY G NFL +M RLA+ER E+SVV DQ Sbjct: 128 NPQGVYGQSKLAGEQAIAASGANHLILRTSWVYGTRGGNFLRTMRRLAREREELSVVADQ 187 Query: 179 FGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 G PT + IA+A QI L + T GI+H+ + G SW DFA I ++ Sbjct: 188 TGCPTWSRHIAQATAQILIQLKRDPSLITEHSGIYHLVSSGQG-SWHDFATAIIEHQRQQ 246 Query: 237 GG-PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 ++ I T Q+PT A RPAYS L+ KLA T +R+ W+E + + Sbjct: 247 ETIACQRIVPITTAQFPTPAKRPAYSVLNTDKLAETFGVRLPDWREALSQV 297 >gi|29726035|gb|AAO88959.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 124/289 (42%), Positives = 170/289 (58%), Gaps = 6/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K + G NGQ+ L+ V ++ + R +D+ L+F+PDVIIN AAY Sbjct: 7 LKVALTGANGQLGYQLAKKLADKVTLLALDRAALDIANNGQVEKTLLAFAPDVIINAAAY 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A +IN G +AK A + I++STDYVFDG S P E PTNP Sbjct: 67 TAVDKAEQERELAKAINETGPQNMAKVAAKLDAVLIHVSTDYVFDGQSDKPYVETDPTNP 126 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYG++KL GE+ V Y ++ILRTAWV++ G+NF+ +MLRLA+ + E+ VV DQ G Sbjct: 127 QSIYGQTKLNGEQAVVKYCAKHIILRTAWVFAEHGNNFVKTMLRLAQSQPELGVVADQMG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG-- 237 PT A IA AII + L ++ + GI+H + G P VSW FA IF + ++ Sbjct: 187 GPTYAGDIAEAIISMVAQLSAENEQNY-GIYHYS--GAPYVSWHQFACSIFQHAVQQQLI 243 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV I T QYPT A RPA+S LDCSK+ + S W+ + N+ Sbjct: 244 AQAPKVNAITTAQYPTPAKRPAFSMLDCSKIQQAFAVSPSNWQAALNNL 292 >gi|282898611|ref|ZP_06306599.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] gi|281196479|gb|EFA71388.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] Length = 303 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 125/296 (42%), Positives = 178/296 (60%), Gaps = 16/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ L + ++I +GR ++DL + + S PD+I+NPAAY Sbjct: 1 MKILLTGISGQVGWELQRSLMTVGDVICLGRNELDLSRYETIPSTIREIKPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A SIN G +A+ A +G ++ STDYVFDG TP E PT P Sbjct: 61 TAVDRAELEPDLAMSINGVAPGILAEEAKRLGAAIVHYSTDYVFDGNQNTPYKENDPTFP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YGK+KLAGE+ + + N++I RT+WVY + G NFLL+M RLAKER EI VV DQ G Sbjct: 121 QNVYGKTKLAGEKSIQAVGTNHLIFRTSWVYGLRGKNFLLTMQRLAKEREEIRVVDDQIG 180 Query: 181 TPTSALQIARA----IIQIAHNLIENSDTSLR-------GIFHMTADGGPVSWADFAEYI 229 +PT + IA I QI ++ + + L GI+H++ GG SW FA+ I Sbjct: 181 SPTWSRMIAEVTAQIIAQIRGQMVISGTSYLADFMAEKGGIYHLSC-GGKTSWYGFAKAI 239 Query: 230 FWE--SAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + ++ G Y ++ I T +YPT A RP+YS LD KL +T ++IS W+E Sbjct: 240 LIDKFADDQYGQYKLQRLVPITTPEYPTPAPRPSYSLLDNQKLLDTFGLKISNWQE 295 >gi|330505517|ref|YP_004382386.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] gi|328919804|gb|AEB60635.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] Length = 292 Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 171/290 (58%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L + + + E+I +GR D DL +P+ + P ++IN AAY Sbjct: 1 MKILISGHTGQVARELQ-LALHEHELISLGRQDFDLSRPQSLRETIMRQRPALVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E+AF+INAE GA+A A + IP I+ STDYVFDG TP E P Sbjct: 60 TAVDQAEQERELAFAINAEAPGAMADACFELDIPLIHYSTDYVFDGSKATPYREADTPRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK+AGE+ + +++ILRT+WVYS G NFLL+MLRL +ER E+SVV DQ G Sbjct: 120 LGVYGASKVAGEQALRISGCDHLILRTSWVYSQHGRNFLLTMLRLLQEREELSVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A ++ + G FH+T G SW FA I G P Sbjct: 180 APTWAGSIASATAEMIDKWQQGRHRW--GTFHLTCQ-GETSWFGFASAIAEHLRTAGKPC 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I + +YPT A RP S LD ++L IR+ W++ ++ L ++ Sbjct: 237 ARLRPIPSSEYPTPAQRPLNSRLDGARLEEEWQIRLPDWQQALQQCLNDM 286 >gi|229587852|ref|YP_002869971.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SBW25] gi|229359718|emb|CAY46566.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SBW25] Length = 289 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 122/292 (41%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+++ L E+I +GR +DL + PD+IIN AA+ Sbjct: 1 MKVLITGQHGQVSRELQLQLQGLGELIVLGRDQLDLANADQIRQQIRAHRPDLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ AF+INA G +A+ A ++GIP I+ STDYVFDG P E NP Sbjct: 61 TAVDQAESEPDAAFAINAIAPGVLAEEAKALGIPLIHYSTDYVFDGSKPDPYTEADTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SKLAGEE +A+ +Y+ILRT+WVYS G NFLL+M RL +E+ ++ +V DQ G Sbjct: 121 LGVYGQSKLAGEEAIAAVGGDYLILRTSWVYSSHGKNFLLTMQRLLQEKPQMRIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIEN---SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT A IAR+ LIE + GI+H+T + G SW FAE I +G Sbjct: 181 APTWAGSIARST----RALIERWQAGEPGEWGIYHLT-NQGETSWFGFAEAIGAHLRTQG 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ I + YPT A RP S LDCS+L ++ +W++ +R L Sbjct: 236 KACAELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPSWQDALRECLAQ 287 >gi|319788035|ref|YP_004147510.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas suwonensis 11-1] gi|317466547|gb|ADV28279.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas suwonensis 11-1] Length = 310 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 119/301 (39%), Positives = 166/301 (55%), Gaps = 15/301 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFSP 51 + L++G NGQ+ + L + E++ + R DL +P+ A+ +P Sbjct: 3 RILLVGGNGQLGRELRRSLIALGEVVAMTRDGRLHDGGSAIAADLDEPQRLAAVVREVAP 62 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D ++N AAYTAVDKAE EPE AF IN E G +A+A + GIP ++ STDYVFDG P Sbjct: 63 DAVVNAAAYTAVDKAESEPEAAFRINGEAPGVLAQACAAAGIPLVHYSTDYVFDGQGTRP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E PT PL +YG SKLAGEE + + +++ RTAWVY+ NFL +MLRL ER E Sbjct: 123 YREDDPTAPLGVYGASKLAGEEAIRAAGGQHLVFRTAWVYAAHSHNFLRTMLRLGAERDE 182 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ GTPT A IA + D + G +H+ ADG SW FAE IF Sbjct: 183 LRVVDDQVGTPTPAAMIADVTAVALRRAL--GDAGVSGTWHLVADGH-TSWHGFAEAIFA 239 Query: 232 ESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E+ G V+ + + ++PT A RPAYS LD S L +++ W+E + ++ Sbjct: 240 EAVAAGVLARAPTVHPVTSAEFPTPARRPAYSRLDTSALQRDFGVQLLHWREALVPVMAE 299 Query: 290 I 290 + Sbjct: 300 L 300 >gi|332705309|ref|ZP_08425387.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] gi|332355669|gb|EGJ35131.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] Length = 296 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 129/292 (44%), Positives = 166/292 (56%), Gaps = 6/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ Q L ++I VGR D+DL +P+ PDVI+N AAYT Sbjct: 3 KILLTGITGQVGQELEDTLSPLGQVIGVGRSDMDLAEPESIRQVIHQIKPDVIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E +A SINA +A+ A ++G ++ISTDYVFDG TP E NP+ Sbjct: 63 AVDKAETELALAKSINAVAPTIMAEEAQNLGAILLHISTDYVFDGKKNTPYTEQDTPNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 YGKSKL GEE V + +ILRTAWVY G NF+ +MLRL ER E+ VV DQ G Sbjct: 123 GSYGKSKLQGEEGVQQKCDRILILRTAWVYGTRGHGNFVKTMLRLGAEREELRVVADQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 TPT A IA I Q+ + +S+ L GI+H T + G SW DFA IF E+ G P Sbjct: 183 TPTWAKDIAVTITQLLQAM--DSNPMLGGIYHFT-NTGVTSWYDFAVAIFEEAKLLGFPL 239 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ T W++ +R +L + Sbjct: 240 KLQRVVPITTPEYPTPAQRPAYSVLSNQKISQTLGSYPPHWRQSLRQMLAEL 291 >gi|296531721|ref|ZP_06894550.1| dTDP-4-dehydrorhamnose reductase protein [Roseomonas cervicalis ATCC 49957] gi|296267953|gb|EFH13751.1| dTDP-4-dehydrorhamnose reductase protein [Roseomonas cervicalis ATCC 49957] Length = 305 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 125/290 (43%), Positives = 177/290 (61%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G GQ+AQ+L + + E+ + P +DL + A+ + P+++IN AA Sbjct: 1 MRILIAGREGQVAQALLRAFAPEGHEVTALEPPALDLTRRDSIAAAIAAARPELVINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED+ +AF++N +GA +A+AA +G P ++ STDYVFDG P E +PT+ Sbjct: 61 YTAVDKAEDDAALAFAVNRDGAAWLAEAASGVGAPFVHFSTDYVFDGAGGAPYAEDAPTS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK GEE V + VILRTAWV S G+NF+ +MLRLA R EI VV DQ Sbjct: 121 PLGVYGRSKREGEEAVLAANPRSVILRTAWVCSADGNNFVKTMLRLAATRDEIGVVADQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT A +A A+ +A +L++ R G+FH+T G P SW FAE IF +A RG Sbjct: 181 GAPTFAADLAEAVRAMAPHLLQAPAGDPRFGLFHLT--GAPHTSWHGFAEAIFAGAAARG 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T YPT+A RPA LDC ++A H I+ + W+ + +L Sbjct: 239 HKVPRLKAIGTADYPTRAQRPADGRLDCRRIATLHGIQAADWRRSLEAVL 288 >gi|218438467|ref|YP_002376796.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] gi|218171195|gb|ACK69928.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] Length = 294 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 123/292 (42%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IGNNGQ+ Q L S ++ V R +DL +P + P++I+N AAYT Sbjct: 3 KILLIGNNGQVGQELQSTLAPIGDLTGVARDQLDLTQPDNIRQVIQDTHPEIIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A+++N +A+ +G I+ISTDYVFDG P+ E TNP+ Sbjct: 63 AVDKAESETELAYTVNETAPKILAQECQKLGATLIHISTDYVFDGTRGIPLTEEDKTNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 YG SKLAGE+ + NY+ILRTAWVY +G NF+ +MLRL +R ++ VV DQ G Sbjct: 123 GAYGASKLAGEQAIQDNCQNYIILRTAWVYGTYGKGNFVKTMLRLGADREQLRVVADQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A IA I Q LI+ GI+H T + G SW DFA+ IF E+ G P Sbjct: 183 TPTWAKDIADTITQ----LIQLEQKVAPGIYHFT-NSGVASWYDFAKAIFEEATAIGFPL 237 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L KL W++ ++ +L + Sbjct: 238 KIKEVVPITTPEYPTPAKRPAYSVLSNQKLRALLGHYPPHWRDSLKQMLFQL 289 >gi|332971546|gb|EGK10496.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330] Length = 308 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 165/289 (57%), Gaps = 5/289 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L + EI R +D+ + +F PD+IIN AA+ Sbjct: 17 MKYLITGANGQVGSQLVAQLQGKAEIFAADRATLDITNRETVFQAARTFRPDIIINAAAH 76 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP++A +IN GA +A AA +G ++ISTDYVFDG T E P P Sbjct: 77 TAVDKAESEPDLAHAINCTGAENLALAAQEVGAIVLHISTDYVFDGKGETAYRETDPVAP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGKSKLAGE+ V + ++ILRTAWV+ G+NF+ +MLRL R + VV DQFG Sbjct: 137 QSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEHGNNFVKTMLRLGASRDTLGVVADQFG 196 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG-- 237 +PT A IA A+I +A ++ D L G++H + G P VSW FA IF ++ +G Sbjct: 197 SPTYAGDIAAALIVMAEQIVNQKDNELFGVYHFS--GSPYVSWHGFASEIFVQAVAQGVL 254 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T YPT A RPA S LDC K+ I S W++ + N+ Sbjct: 255 AKSPTLNAITTADYPTPAVRPANSRLDCGKVQAAFGIAPSDWRKALLNL 303 >gi|113475071|ref|YP_721132.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101] gi|110166119|gb|ABG50659.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101] Length = 293 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/290 (44%), Positives = 169/290 (58%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L + + E+ VGR ++DL + P++IIN AAY Sbjct: 1 MKILLTGINGQLGNQLQTPLKKIGEVSVVGRENLDLADSNAISQLIGQVQPELIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A ++N G +AK A +G I+ISTDYVFDG P E TNP Sbjct: 61 TAVDKSEKEPELADAVNRIAPGIMAKEAKKLGATLIHISTDYVFDGSQSRPYTETDLTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQF 179 L IYGKSKLAGEE + N++I+RTAWVY +G NF+ +MLRL K+R E+ VV DQ Sbjct: 121 LGIYGKSKLAGEEAIRETEVNHIIIRTAWVYGAYGKGNFVKTMLRLGKDREELRVVYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A AI QI +L NS T G +H T + G +SW DFA IF E+ + G P Sbjct: 181 GCPTWTGDLAEAIAQIIPHL--NSQT--YGTYHYT-NSGAISWYDFAMAIFEEAKKLGFP 235 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPA+S L+ K++ W +R +L Sbjct: 236 LEVKRVVPITTAEYPTPAKRPAFSVLNSGKISKVLGNHPPYWLNSLRQML 285 >gi|166362760|ref|YP_001655033.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Microcystis aeruginosa NIES-843] gi|166085133|dbj|BAF99840.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Microcystis aeruginosa NIES-843] Length = 291 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 124/292 (42%), Positives = 172/292 (58%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+ Q L Q E+I +GR ++DL + PD ++N +AYT Sbjct: 3 KVLLIGAKGQVGQELQVTLPQLGEVISIGREELDLTNSQKIGQLIREIHPDYLVNASAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A+SINA +A+AA+ ++ISTDYVFDG TP E TNPL Sbjct: 63 AVDKAETEPDLAYSINAIAPKIMAEAAEKTKAKFLHISTDYVFDGRKNTPYLETDLTNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKL GEE++ + + +ILRTAWVY +G SNF+ +M+RL KER E+ VV DQ G Sbjct: 123 GVYGQSKLRGEEEINTVNSQAIILRTAWVYGSYGKSNFVKTMVRLGKEREELKVVVDQLG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A IA AI Q L+ N+D GI++ T + G SW D + IF E+ G P Sbjct: 183 SPTWAKDIATAITQ----LLINADNP-AGIYNFT-NSGVASWFDLTKAIFEEAKTSGIPL 236 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ W++ ++ +L + Sbjct: 237 KIQRVIPITTAEYPTPAVRPAYSVLSGQKISQQLGYIPPYWRDSLKAMLTQL 288 >gi|257058395|ref|YP_003136283.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] gi|256588561|gb|ACU99447.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] Length = 296 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 126/290 (43%), Positives = 170/290 (58%), Gaps = 9/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ Q L E+I V R IDL KP P++IIN AAYT Sbjct: 4 KILVTGIDGQVGQELKKTLNPLGEVIGVNRQTIDLTKPDRLRQLIQEIHPNIIINGAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A ++N IA+ A +G ++ISTDYVFDG P E PT+P+ Sbjct: 64 AVDQAEKEPELALAVNGIAPTIIAEEAHKLGAFLLHISTDYVFDGTKNIPYTEEDPTHPV 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + +++ YVILRTAWVY +G SNF+ +MLRL +ER +I VV DQ G Sbjct: 124 SVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKSNFVKTMLRLGQEREQIRVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT A IA+ I Q+ L ++N+ I+H T + G SW DFA IF E+ G P Sbjct: 184 SPTWAQDIAQTINQLLLTLDLKNTAE----IYHFT-NSGVASWYDFAVTIFEEAQNIGFP 238 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T YPT A RP+YS L K+ T W+ ++ +L Sbjct: 239 LKVQQVDPITTADYPTPAKRPSYSVLSGQKITATLGKYPPYWRNSLKQML 288 >gi|5545319|dbj|BAA82534.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus actinomycetemcomitans] Length = 292 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 125/288 (43%), Positives = 168/288 (58%), Gaps = 6/288 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGHCLTQQLQGKHEILAVDHDELDITNQSAVKKTVKNFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA S+G ++ISTDYVFDG E T+P Sbjct: 63 AVDRAETEIELSEAINVKGPQYLAEAAKSVGAAILHISTDYVFDGRRAGKYKETDATDPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +IYGK+KLAGE+ V + +++LRTAWV+ GSNF+ +MLRLAK R + VV DQ G Sbjct: 123 SIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGSNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG--G 238 PT A IA A+IQIA +I GI+H T G P VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIAGKSVEY-GIYHFT--GEPYVSWCDFARAIFDEAVSQNMLE 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 KVPLVNAITTADYPTPAKRPANSCLDLTKIQQVFGIQPSDWQRALKNI 287 >gi|254295529|ref|YP_003061551.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] gi|254044060|gb|ACT60854.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] Length = 334 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 140/327 (42%), Positives = 186/327 (56%), Gaps = 39/327 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKD------FASFFLSFSPDV 53 MK V G NGQ+ ++L + QD +++ GRP +DL + D PDV Sbjct: 1 MKVFVTGENGQVVKALIKLADQDSLDVYTAGRPWLDLSELADDDKCEHLRLMIEDIGPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG------- 106 +IN AAYT VDKAE+E ++A ++N GAGA+A AA + +P I ISTDYVF G Sbjct: 61 VINAAAYTNVDKAEEEGDMAAAVNTTGAGAVAMAAAKLNLPIIQISTDYVFAGDKTADIY 120 Query: 107 ---------------------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVI 144 LS E T+P +YG++KL GE K+A+Y N +VI Sbjct: 121 DPENPEYADYDAEDLADIRANLSDGTYVETDATHPQGVYGQTKLEGE-KLAAYVNPKHVI 179 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 LRTAWVYS G+NFL +MLR+ R E+ VV DQFG PT A IA+ I+++A N++E D Sbjct: 180 LRTAWVYSETGNNFLKTMLRVGAARGELGVVNDQFGAPTHADAIAQGIVKVARNIVEQPD 239 Query: 205 -TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 T L G+FHMT G SW FAE IF S GGP K+ I T++YP A RPA S L Sbjct: 240 NTELYGVFHMTCRGY-TSWHGFAEAIFKASELAGGPTPKLNSITTEEYPLPAPRPANSRL 298 Query: 264 DCSKLANTHNIRISTWKEGVRNILVNI 290 DCSK+A HN+ + W++ V +V + Sbjct: 299 DCSKIARVHNVELPQWQDMVMKTVVKV 325 >gi|218245359|ref|YP_002370730.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] gi|218165837|gb|ACK64574.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] Length = 296 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/293 (43%), Positives = 170/293 (58%), Gaps = 9/293 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ Q L E+I V R IDL KP P++IIN AAYT Sbjct: 4 KILVTGIDGQVGQELKKTLNPLGEVIGVNRQTIDLTKPDRLRQLIQEIHPNIIINGAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A ++N IA+ A +G ++ISTDYVFDG P E PT+PL Sbjct: 64 AVDQAEKEPELALAVNGIAPTIIAEEAHKLGAFLLHISTDYVFDGTKNIPYTEEDPTHPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + +++ YVILRTAWVY +G SNF+ +MLRL +ER +I VV DQ G Sbjct: 124 SVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKSNFVKTMLRLGQEREQIRVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT A IA+ I Q+ L ++N+ I+H T + G SW DFA IF E+ G P Sbjct: 184 SPTWAQDIAQTINQLLLTLDLKNTAE----IYHFT-NSGVASWYDFAVTIFEEAQNIGFP 238 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP+ S L K+ T W+ ++ +L + Sbjct: 239 LKVQQVDPITTADYPTPAKRPSSSVLSGQKITATLGKYAPYWRNSLKQMLTQL 291 >gi|41205693|gb|AAR99613.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 282 Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 126/288 (43%), Positives = 165/288 (57%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q +VE+ + D+D+ PD++IN AA Sbjct: 1 MKIVVTGANGQLGQELVGQLQQTNVELYSFTKSDLDITNDSIVNETITKIKPDILINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G +A AA+ +G YISTDYVFDG S TP E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRNLAIAAEKVGAKICYISTDYVFDGTSMTPYREYDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK AGEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKYAGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIGVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR II++ T GI+H T + G SW +FA+ IF ES Sbjct: 181 GSPTYTVDLARFIIELVQ-------TEKFGIYHAT-NSGSCSWYEFAKAIFEES----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV I T+Q+P A RP YS LD + + W+E ++ L Sbjct: 229 HVKVNPITTEQFPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFL 276 >gi|220909659|ref|YP_002484970.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219866270|gb|ACL46609.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 298 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 120/292 (41%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L++G+ GQ+ L + E++ + R +DL P+ P VIIN AAYT Sbjct: 10 KILLLGSQGQVGAELQHILSSASELMALSRAQLDLAHPQRLPDLIAEIQPQVIINAAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A +NA+ +A AA +++STDYVF G TP E PT PL Sbjct: 70 AVDRAESEPEVAEIVNAKVPTELAIAARQCNALLVHLSTDYVFAGQQSTPYRETDPTAPL 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 ++YG++KLAGEE + + ++ILRTAWVY ++G NF+ +MLRL +R E+ VV DQ G Sbjct: 130 SVYGQTKLAGEEGIRQVWDRHLILRTAWVYGVYGKGNFVKTMLRLGADRSELRVVADQVG 189 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A A IAH L+++ G +H T + G SW DFA IF E+ +RG Sbjct: 190 SPTWAADLAGA---IAH-LVQHFQPDWAGTYHYT-NSGVTSWYDFAIAIFEEARQRGFKL 244 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+C K ++ W++ +R +L N+ Sbjct: 245 QVEQVMPITTPEYPTPATRPAYSVLNCQKFSSLLGAAPPHWRQSLRQMLTNL 296 >gi|91776363|ref|YP_546119.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT] gi|91710350|gb|ABE50278.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT] Length = 306 Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 118/298 (39%), Positives = 167/298 (56%), Gaps = 14/298 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ +L E++ + R +DL KP PD+IINPAAYT Sbjct: 6 KILLTGINGQVGHALYPKLQSLGEVVALDRSQLDLSKPDHIRDVVRQTKPDLIINPAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A++IN G +A+ A + ++ STDYVFDG TP E TNPL Sbjct: 66 AVDKAESEPELAYAINGTAPGILAEEAAKLNALLVHYSTDYVFDGTKTTPYTELDETNPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SKLAGE+ + N++I RT+WVY +G NF+ ++LRLA ER +++V DQFG Sbjct: 126 SVYGASKLAGEKAIQEVGANHLIFRTSWVYGAYGKNFMRTILRLAAERDSLNIVADQFGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI---FWESAER-- 236 PTS IA A I H D + RG++H+ + G SW FA I + E A++ Sbjct: 186 PTSTESIADATITALHAW----DGTQRGVYHL-VNTGETSWHGFALEIIRQYGEIAQKKN 240 Query: 237 ----GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +YPT AHRPA S + K +T ++ W+ +R+ + ++ Sbjct: 241 LAKLKSTVENVVGITTAEYPTPAHRPANSKMSTEKFMSTFKTELAPWELALRSTVTHL 298 >gi|84684393|ref|ZP_01012294.1| hypothetical protein 1099457000260_RB2654_12249 [Maritimibacter alkaliphilus HTCC2654] gi|84667372|gb|EAQ13841.1| hypothetical protein RB2654_12249 [Rhodobacterales bacterium HTCC2654] Length = 288 Score = 221 bits (564), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 170/288 (59%), Gaps = 9/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A+ L++ + V + +GR DL +P+ A +PDV+IN AAY Sbjct: 1 MKALVFGTTGQVARELAATTPKGVRLEALGRDRADLSRPEKCAEAIRHAAPDVVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE++ +A +N E G +A+A ++GIP ++STDYVF G P +PT P Sbjct: 61 TAVDRAEEDEALATVVNGEAPGEMARACAALGIPFFHVSTDYVFSGEGDAPWAVDAPTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE + + + ILRT+WV S G NF+ +MLRL++ R +++V DQ G Sbjct: 121 LNAYGRSKLAGETAIRAAGGPHAILRTSWVVSGHGGNFVKTMLRLSETRDRLTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A+ +A L+ +D S G FH + G P VSWADFA I +S G Sbjct: 181 GPTPASDIAAALWSMAVALV--ADPSKGGTFHFS--GAPDVSWADFAREILRQS----GR 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I TK YPT A RPA S LDC +I W+ G+ +IL Sbjct: 233 TTVVEDIATKDYPTPARRPANSRLDCRATEAAFDIVRPDWRVGLTDIL 280 >gi|159027476|emb|CAO89441.1| rfbD [Microcystis aeruginosa PCC 7806] Length = 291 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 124/289 (42%), Positives = 171/289 (59%), Gaps = 9/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+ Q L E+I +GR ++DL + PD ++N AAYT Sbjct: 3 KVLLIGAKGQVGQELQVTLPYLGEVISIGREELDLTNSEKIGQLIREIRPDYLVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A+SINA +A++A+ I ++ISTDYVFDG TP E TNPL Sbjct: 63 AVDKAETEPDLAYSINAIAPKIMAESAEKIKAKFLHISTDYVFDGRKNTPYLETDLTNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKL GEE++ + + +ILRTAWVY +G SNF+ +MLRL KER E+ VV DQ G Sbjct: 123 GVYGQSKLRGEEEIKTVNSQAIILRTAWVYGSYGKSNFVKTMLRLGKEREELKVVVDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + IA AI Q L+ N+D GI++ T + G SW D + IF E+ G P Sbjct: 183 SPTWSKDIATAITQ----LLINADNP-TGIYNFT-NSGVASWFDLTKAIFEEAKISGIPL 236 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPAYS L K++ W++ ++ +L Sbjct: 237 KIQRVIPITTAEYPTPAVRPAYSVLSSQKISQQLGYIPPYWRDSLKAML 285 >gi|300114907|ref|YP_003761482.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113] gi|299540844|gb|ADJ29161.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113] Length = 294 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 113/281 (40%), Positives = 168/281 (59%), Gaps = 3/281 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L E+ GR ++L + + P +I+N AAYT Sbjct: 7 RILLVGASGQVGWELQRSLAPLGEVFIPGRERLNLAQVDSIRPYLAEIQPTLIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+EPE A +IN + G +A+ A G I+ STDYVFDG P E PL Sbjct: 67 AVDKAEEEPEQALAINGKAPGVLAETARQQGAALIHYSTDYVFDGQGVYPYREGDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAGE+ +A+ Y+ILRT+WVY + G NFLL+M RLA+ER ++VV DQ+GT Sbjct: 127 NVYGQTKLAGEQAIAAVGGAYLILRTSWVYGLRGHNFLLTMQRLAQEREVLTVVNDQWGT 186 Query: 182 PTSALQIARAIIQI-AHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + IA QI A + + D+ GI+H++ GG +W FA+ I A+ GP Sbjct: 187 PTWSRLIAEGTAQIVAQSRGQRQDSIPQAGIYHLSC-GGKTTWHGFAQAILARLAQGAGP 245 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +++ I + YP A RPA+SCLD +++ +T I++ +W+ Sbjct: 246 VARLEAIPSADYPIPARRPAFSCLDNTRIKDTFGIQLPSWR 286 >gi|292492258|ref|YP_003527697.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4] gi|291580853|gb|ADE15310.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4] Length = 296 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 116/285 (40%), Positives = 170/285 (59%), Gaps = 4/285 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L E+I + R +DL + ++ S P +I+N AAYT Sbjct: 7 RILLLGASGQVGWELQRTLAPLGEVIALRRDRLDLAQVENIGSCLADIQPILIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE+EPE A +IN + G +A+AA G I+ STDYVFDG + +P E PL Sbjct: 67 AVDQAEEEPERAMAINGDVPGILAEAARQQGAALIHYSTDYVFDGENTSPYRETDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAGE+ +A+ Y+ILRT+WVY + G NFLL+M RLA+ER + VV DQ+GT Sbjct: 127 NVYGQTKLAGEKAIAAVGGAYLILRTSWVYGLRGRNFLLTMQRLAQEREALKVVDDQWGT 186 Query: 182 PTSALQIARAIIQI---AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + IA QI + +++ G +H++ GG +W FA I A+R Sbjct: 187 PTWSRLIAEGTAQIIAQSRGQMQDYIRQQAGTYHLSC-GGKTTWYGFARVILDRLAQRTT 245 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P +++ I T YPT A RPA+S LD S + +T I++ WKE + Sbjct: 246 PVARLEAIPTSGYPTPAQRPAFSSLDNSHVRDTFGIQLPHWKEAL 290 >gi|307130157|ref|YP_003882173.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii 3937] gi|306527686|gb|ADM97616.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii 3937] Length = 287 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 121/289 (41%), Positives = 167/289 (57%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + + E+ ++D+ + + ++ PDVI+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPEGWEVWTTDSDELDITNREQVLTAIAAYPPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +N G +A AA +G +++STDYVFDG + P E PTNP Sbjct: 61 TAVDKAESEPEQAVLVNKAGPENLALAAKLVGARLVHVSTDYVFDGKATVPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V + +I+RTAWV+S +G+NF+ +MLRL KER +SVV DQ G Sbjct: 121 LGVYGQTKLDGERAVVAVLPESIIIRTAWVFSEYGNNFVKTMLRLGKEREMLSVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A IA+AII + ++ G++H D VSW FA IF + E+ Sbjct: 181 CPTYAGDIAQAIIILLQQQVDTG-----GLYHFCGD-EEVSWHGFASAIFTIAGEQQTLT 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T+QYPT A RPAYS LDCSK+ I+ S W+E + I+ Sbjct: 235 KVPVVNAITTEQYPTPAARPAYSTLDCSKITQLVGIQPSAWREALGIII 283 >gi|126654758|ref|ZP_01726292.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp. CCY0110] gi|126623493|gb|EAZ94197.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp. CCY0110] Length = 292 Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 121/292 (41%), Positives = 166/292 (56%), Gaps = 7/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ Q L E+I R +DL P + PD+IIN AAYT Sbjct: 3 KILLTGSDGQVGQDLQQTLSPIGEVIATNRQQLDLTSPDNIRQVIQKIQPDIIINSAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++AF++N IA+ A IG ++ISTDYVFDG TP E T+PL Sbjct: 63 AVDKAESESDLAFAVNGVAPAIIAEEAKKIGAFLLHISTDYVFDGKKNTPYLETDITHPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE+ + + YVILRTAWVY G NF+ +MLRL +++ ++ +V DQ G Sbjct: 123 GVYGKSKLAGEQGIEKNGDRYVILRTAWVYGTEGKGNFVKTMLRLGQQKEQLGIVSDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + IA I QI L + R I+H T + G SW D A IF E+ G P Sbjct: 183 SPTWSYDIANTISQILTKL---NLAETREIYHFT-NSGVASWYDLAVAIFEEAKNLGFPL 238 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +V I T++YPT A RP YS L K AN W++ ++ +L+ + Sbjct: 239 NIKQVNPITTEEYPTPAKRPHYSVLSGKKTANLLGYNAPYWRDSLKEMLIKL 290 >gi|172037461|ref|YP_001803962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142] gi|171698915|gb|ACB51896.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142] Length = 293 Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 118/290 (40%), Positives = 167/290 (57%), Gaps = 7/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ Q L V E++ R +DL P + PD+I+N AAYT Sbjct: 3 KILLTGSDGQVGQDLQQTLVPIGEVVATNRQQLDLTSPNNIRQVIQEIQPDIIVNSAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++AF+INA +A+ A IG ++ISTDYVFDG TP E T+PL Sbjct: 63 AVDKAESESDLAFAINAIAPAIMAEEAKKIGAFLLHISTDYVFDGTQNTPYLETDKTHPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ + + YVILRTAWVY G NF+ +MLRL +E+ ++ +V DQ G Sbjct: 123 GVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTEGKGNFVKTMLRLGQEKEQLGIVSDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT + IA I Q+ L + + R I+H T + G SW D A +F E+ G P Sbjct: 183 TPTWSYDIANTISQM---LTQLNLAETREIYHFT-NSGVASWYDLAVAVFEEAKNIGFPL 238 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + ++ I T++YPT A RP YS L K A W++ ++ +L+ Sbjct: 239 NIKQINPITTQEYPTPAKRPHYSVLSGKKTAKLLGYNAPYWRDSLKKMLI 288 >gi|152978506|ref|YP_001344135.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus succinogenes 130Z] gi|150840229|gb|ABR74200.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus succinogenes 130Z] Length = 291 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 174/290 (60%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L+ EI+ V R +D+ + +SF PDVIIN AA+T Sbjct: 3 KFLITGAKGQVGYCLTQQLTGKAEILAVDRDGLDITDQSAVRNAVISFQPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ IG ++ISTDYVF+G E TNP Sbjct: 63 AVDRAETEVELSEAINVKGPQYLAEAANEIGAAILHISTDYVFEGNGTNEYQEDDQTNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KLAGE V +++LRTAWV+ G+NF+ +M+RL KER + VV DQFG Sbjct: 123 GVYGRTKLAGEIAVQQANPKHIVLRTAWVFGERGNNFVKTMIRLGKEREVLGVVGDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER---- 236 PT A IA A+I IA+ +I N T + G++H T G P VSWA+FA+ IF E+ + Sbjct: 183 PTYAGDIAAALIHIANEII-NGKTDVFGVYHFT--GKPYVSWAEFAKAIFNEAVSQKILE 239 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T +YPT A RPA S L+ K+ T I+ S W++ ++NI Sbjct: 240 KSPL--VNAIATHEYPTPAKRPANSRLNLDKIDRTFGIKPSDWQKALKNI 287 >gi|282898470|ref|ZP_06306460.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] gi|281196636|gb|EFA71542.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] Length = 303 Score = 219 bits (557), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 121/296 (40%), Positives = 175/296 (59%), Gaps = 16/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ L + ++I +GR ++DL + + S PD+I+NPAAY Sbjct: 1 MKILLTGISGQVGWELQRSLMTVGDVICLGRNELDLSRCETITSTIREIKPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A SIN G +A+ A +G I+ STDYVFDG TP E T P Sbjct: 61 TAVDRAESEPDLAMSINGVAPGILAEEAKRLGGAIIHYSTDYVFDGNQNTPYKENDSTFP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YGK+KLAGE+ + + N++I RT+WVY + G+NFLL+M RLAKER EI VV DQ G Sbjct: 121 QNVYGKTKLAGEKAIQAVGVNHLIFRTSWVYGLRGNNFLLTMQRLAKEREEIRVVDDQIG 180 Query: 181 TPTSALQIARAIIQI-----------AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +PT + IA Q+ + + N GI+H++++ G SW FA+ I Sbjct: 181 SPTWSRMIAEVTAQMIAQIRCQMVISGGDYLANFMAEKGGIYHLSSE-GKTSWYGFAKAI 239 Query: 230 FWE--SAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + ++ G Y ++ I T +YPT A RP YS LD KL +T ++IS W++ Sbjct: 240 LIDKFADDQYGQYKLQRLVPITTPEYPTPAPRPGYSLLDNQKLFDTFGLKISNWQQ 295 >gi|1944161|dbj|BAA19635.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans] Length = 292 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 166/290 (57%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGKHEILAVDHDELDITNQNAVKKTVENFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+ A S+G ++ISTDYVFDG E +P Sbjct: 63 AVDRAETEIELSEAINVKGPQYLAETAKSVGAAILHISTDYVFDGRRAGKYKETDAVDPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ GSNF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGSNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG--- 237 PT A IA A+IQIA +I GI+H T G P VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIAGESVEY-GIYHFT--GEPYVSWCDFARAIFDEAVSQNMLE 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 KAPL--VNAIITADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|330806982|ref|YP_004351444.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375090|gb|AEA66440.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 289 Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 118/289 (40%), Positives = 167/289 (57%), Gaps = 2/289 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG NGQ++++L S E+I G +DL +P + + P +IIN AA+ Sbjct: 1 MRILIIGQNGQVSRALQSRLSGLGELIVRGSDQLDLAQPDSLRAPIEALKPGLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE AF+INA G +A+AA ++G+P I+ STDYVFDGL P E NP Sbjct: 61 TAVDQAESEPERAFAINATAPGILAQAAVALGVPLIHYSTDYVFDGLKPAPYTEDDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SKLAGE + ++ILRT+WVYS G NFLL+M RL +E+ ++ VV DQ G Sbjct: 121 LSVYGRSKLAGENAIRQAGGQHLILRTSWVYSTEGRNFLLTMQRLLQEKPQLRVVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA + Q+ + G +H+TA G SW FA+ I +R P Sbjct: 181 APTWAGTIADSTAQLIERW-QAGQPGAWGTYHLTAR-GETSWFGFAQAIGENLLDRHKPC 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I + YPT A RP S LDC++L + W+ ++ L Sbjct: 239 ALLEPIESSAYPTPAPRPLNSRLDCTRLFKEWGVSQPDWRSALQQCLAG 287 >gi|240948931|ref|ZP_04753287.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305] gi|240296746|gb|EER47357.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305] Length = 292 Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 171/289 (59%), Gaps = 8/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L+ EI+ V R ++D+ +F PDVIIN AA+T Sbjct: 3 KFLITGAKGQVGHCLTEQLTGKAEILAVDRDELDITDQSAVKKIVKTFKPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ IG ++ISTDYVF+G E TNP Sbjct: 63 AVDRAESEVELSEAINVKGPQYLAEAANEIGAMILHISTDYVFEGTGSGEYKEDDQTNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KLAGE V + +ILRTAWV+ G NF+ +MLRLAK+R + +V DQFG Sbjct: 123 GVYGRTKLAGEIAVQQANSRSIILRTAWVFGEHGHNFVKTMLRLAKDRDSLGIVGDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPY 240 PT A IA+ +I+IA+ ++ + + G++H T G P VSW +FA+ IF E AE Sbjct: 183 PTYAGDIAKTLIEIANQILAGKEDAF-GVYHFT--GKPYVSWYEFAKAIFAE-AELQNIL 238 Query: 241 SK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 K V I T YPT A RPA S LD +K+ NI S W++ ++NI Sbjct: 239 EKSPLVNSIATSDYPTPAKRPANSRLDLTKIKQVFNIEPSNWQKALKNI 287 >gi|307153969|ref|YP_003889353.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306984197|gb|ADN16078.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 294 Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 118/292 (40%), Positives = 170/292 (58%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G+NGQ+ Q L + EII V R +DL + + P++I+N AAYT Sbjct: 3 RILLLGSNGQLGQELQTTLAPLGEIISVARDQLDLTQTESIRQLIAQVHPEMIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A+++N +A+ + + +++STDYVFDG P+ E TNP+ Sbjct: 63 AVDKAESETELAYAVNEIAPKILARESQKLAATFLHVSTDYVFDGTRGIPLTETDETNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 +Y KSKLAGE+ +A Y+ILRTAWVY +G SNF+ ++LRL ER ++ VV DQ G Sbjct: 123 GVYAKSKLAGEKAIAENCERYIILRTAWVYGTYGKSNFVKTLLRLGAEREQLRVVADQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A IA AI + L+E + + GI+H T + G SW DFA IF E+ G P Sbjct: 183 TPTWAKDIADAIAK----LLELEEKTPTGIYHFT-NSGVASWYDFARAIFEEAKLIGFPL 237 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T +YPT A RPAYS L K+ W++ ++ +L + Sbjct: 238 KINEVVPITTAEYPTPAKRPAYSVLSQQKIRPLLGNYPPYWRDSLKQMLFQL 289 >gi|330873322|gb|EGH07471.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 301 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 120/301 (39%), Positives = 171/301 (56%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIHTLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G ++ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVALLINGEAPGVLAREAAALGAWLVHYSTDYVFDGSGDSQWQED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ GSNF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGSNFAKTMLRLAAERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I ++ + D+ +L GI+H+ A G SW FA ++ E A Sbjct: 181 SDQYGAPTGAELIADVTAHILRRVLGDQDSAALAGIYHLAA-AGETSWHGFARFVL-EHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ER G KV I T+ YP A RP S L KL T +++ W++G + +L Sbjct: 239 ERNGVALKVSADKVGAIATEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|306842187|ref|ZP_07474856.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. BO2] gi|306287774|gb|EFM59205.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. BO2] Length = 249 Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/240 (47%), Positives = 153/240 (63%), Gaps = 1/240 (0%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD++++ AAYTAVD AEDE E+AF++NA GA A+A+A+ + G+P I++STDYVF G Sbjct: 7 AIKPDLVVSAAAYTAVDLAEDEQELAFAVNAIGAEAVAEASKNCGVPVIHLSTDYVFAGD 66 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + P E T P ++YG+SKL GE VA ++ILRTAWVYS FG NF+ +ML+LA+ Sbjct: 67 ADEPYAETDVTGPRSVYGRSKLEGERLVAHANPRHIILRTAWVYSPFGKNFVKTMLKLAE 126 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R +SVV DQ+G PTSAL IA AIIQ+A +L + S G++H+ G +W+ FA Sbjct: 127 TRGALSVVSDQWGNPTSALDIADAIIQVADHLAATPEFSAYGVYHLVG-AGDTNWSGFAR 185 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 IF ESA GGP + V I T YPTKA RP S L K S W+ + ++ Sbjct: 186 AIFDESARLGGPTATVTDIATADYPTKAARPMNSRLSTEKFQAAFGWSPSHWEASLAQVM 245 >gi|85707418|ref|ZP_01038499.1| hypothetical protein ROS217_12331 [Roseovarius sp. 217] gi|85668074|gb|EAQ22954.1| hypothetical protein ROS217_12331 [Roseovarius sp. 217] Length = 281 Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 165/291 (56%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L + E++ +GR + DL +P A+ +PD++IN AAY Sbjct: 1 MKILVFGRTGQVATELQRL----AEVVALGRDEADLTQPDRCAAAIRDHAPDLVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+A++E +A IN GA+A+A +GIP ++STDYVFDG P P P Sbjct: 57 TAVDRAQEEETLATVINGAAPGAMARACADLGIPFCHVSTDYVFDGSGTAPRQPSDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE V + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 117 CNAYGRSKLAGEEAVRAAGGQSAILRTSWVFSAHGNNFVRTMLRLSETRDALNVVEDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A++ + ++ G++H + G P SWA+FA IF R G Sbjct: 177 GPTPAADIAAALLTMGRAMVAGHAG---GLYHFS--GAPDASWAEFAREIF----ARAGR 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T YPT A RP S LDC L I W++GV +L ++ Sbjct: 228 ATTVTGIPTSAYPTPAARPLNSRLDCGTLTAEFGIARPDWRDGVSRVLEHL 278 >gi|71735408|ref|YP_273240.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555961|gb|AAZ35172.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 301 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 118/301 (39%), Positives = 172/301 (57%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN+E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDLAVLINSEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA + H ++ + ++ LRG++H+ A G SW FA ++ E A Sbjct: 181 ADQYGAPTGAELIADVTAHMLHRVLGDKHSAELRGVYHLAA-AGETSWHGFARFVL-EHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ER G K+ I T+ YP A RP S L KL T +++ W++G + +L Sbjct: 239 ERNGVQLKVSSDKIGAIPTEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|16264651|ref|NP_437443.1| putative dTDP-4-dehydrorhamnose reductase protein [Sinorhizobium meliloti 1021] gi|15140789|emb|CAC49303.1| putative dTDP-4-dehydrorhamnose reductase protein WgaJ (formerly ExpA10) [Sinorhizobium meliloti 1021] Length = 300 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 125/289 (43%), Positives = 175/289 (60%), Gaps = 3/289 (1%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ V G GQ+A L S +E++ +GRP +DL +P PD++++ A Sbjct: 1 MRIAVTGCEGQLALGLVERSHRRSGMEVVTIGRPHLDLTEPATILPAIERCRPDLVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE EPE AF++NA GAGA+A+AA + +P ++ISTDYVFDG E Sbjct: 61 AYTAVDQAESEPEAAFAVNAFGAGAVAEAAACLEVPIVHISTDYVFDGSKPRSYAEGDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YG SKLAGE VA T ++ILRT WVYS FG NF+ ++LRLA+ER +I+VV DQ Sbjct: 121 APLSVYGASKLAGESAVAEATPRHLILRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G P+SA+ +A AI+ I+ L ++ + G++H+ A G VS ADFA + S GG Sbjct: 181 RGNPSSAIDLADAILDISARLTKSRQDAAFGLYHL-AGSGVVSRADFARHALAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P++ V I T +PT A RPA S L +K T + W+ V + Sbjct: 240 PWAHVRDIATGGFPTPASRPANSSLSSAKFNATFGQAMPAWQGSVERTV 288 >gi|327478700|gb|AEA82010.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 304 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 113/280 (40%), Positives = 159/280 (56%), Gaps = 2/280 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L S +++ +G +DL P+ PD+IIN AAY Sbjct: 1 MKILITGSTGQLARELQSELAGTGKLLALGHNALDLAVPEQIREQVRLLRPDLIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E AF++NA G +A+ A +G+P I+ STDYVFDG P DE NP Sbjct: 61 TAVDPAETHREQAFAVNARGPQVLAEEAARLGVPLIHYSTDYVFDGRKAEPYDEHDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ + + ++ILRT+WVYS G NFLL+M RL +ER +SVV D+ G Sbjct: 121 LGVYGASKLAGEQAIQAVGGEHLILRTSWVYSRHGKNFLLTMQRLLQERDALSVVSDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR ++ G++H+TA G SW FA I + G Sbjct: 181 APTWAATIARVTAELVRKR-NTGQAGPSGLYHLTAS-GETSWYGFACSIAERLRQEGRLR 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +++ I +K YPT A RP S L+C++L +++ W+ Sbjct: 239 AEITPILSKDYPTAAQRPLNSRLNCARLQQDWGVQLPDWE 278 >gi|259414812|ref|ZP_05738735.1| dTDP-4-dehydrorhamnose reductase [Silicibacter sp. TrichCH4B] gi|259349263|gb|EEW61010.1| dTDP-4-dehydrorhamnose reductase [Silicibacter sp. TrichCH4B] Length = 290 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 128/288 (44%), Positives = 161/288 (55%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L+S +I VGR DL P A+ SP +IN AAY Sbjct: 10 MSILVFGATGQVARELASY----EGVISVGRARADLSDPGACATLIREISPQAVINAAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+ A GIP ++ISTDYVF G P P Sbjct: 66 TAVDKAESEEELATIINGAAPGAMVAACVQAGIPFVHISTDYVFAGSGTAAWQTDDPVAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + YVILRT+WV S G+NF+ +MLRL ER +++V DQ G Sbjct: 126 PNAYGRSKRAGEEAVIAAGGTYVILRTSWVVSAHGNNFVKTMLRLGAERDRLTIVGDQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IARA +++A L ++ + GI+H+ G P VSWA FA IF +S G Sbjct: 186 APTPARDIARACVEMAGQL--RAEPAKSGIYHL--QGAPYVSWAGFAAEIFAQS----GL 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T YPT A RP S LDC+ L I W+ G+R+IL Sbjct: 238 ACEVADIPTSDYPTPAVRPLNSRLDCTTLETVFGIPQPDWRSGLRDIL 285 >gi|217970540|ref|YP_002355774.1| dTDP-4-dehydrorhamnose reductase [Thauera sp. MZ1T] gi|217507867|gb|ACK54878.1| dTDP-4-dehydrorhamnose reductase [Thauera sp. MZ1T] Length = 296 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 123/298 (41%), Positives = 172/298 (57%), Gaps = 12/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP--KDFASF---FLSFSPDVII 55 MK L++G NGQ+ L ++ + R D L +D S +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPVGTVVALDRGGADGLHGDLEDLDGIDRTVRSLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + E A INAE G +A+AA ++G ++ STDYVFDG TP E Sbjct: 61 NAAAYTAVDKAETDVERAQRINAEAPGVLARAAATVGALLVHYSTDYVFDGSGDTPWREN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKLAGEE + + ++ILRT+WVY+ G NF +MLRLA ER ++V+ Sbjct: 121 APTAPLSVYGRSKLAGEEAIRAAGCRHLILRTSWVYAARGGNFARTMLRLAAERERLTVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G PT A IA AH L E++D SL G +H+ A GG SW +A ++ ++ Sbjct: 181 ADQHGAPTGAELIADV---SAHALRAEHADRSLGGTYHLAA-GGETSWHGYASFVIEQAR 236 Query: 235 ERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G ++ I T+ YPT A RP S LD S+L + + W++GV +L I Sbjct: 237 KLGATLKAGEIAPIGTRDYPTAAARPLNSRLDTSRLRERFGLALPDWRDGVARMLREI 294 >gi|122934727|gb|ABM68332.1| RmlD [Geobacillus tepidamans] Length = 282 Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 162/288 (56%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q + E+ + D+D+ PD+IIN AA Sbjct: 1 MKIVVTGANGQLGQELVRQLQQTNFELYSFTKSDLDITNESIVNEVITKIKPDIIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G ++A AA+ +G YISTDYVFDG S P E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRSLAVAAEKVGAKICYISTDYVFDGNSAIPYREYDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSKL GEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKLVGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIGVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AH +IE T GI+H T + SW +FA+ IF ES + Sbjct: 181 GSPTYT-------VDLAHFIIELVQTEKFGIYHAT-NSEACSWYEFAKAIFEESNIK--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T+Q+P A RP YS LD + + W+E ++ L Sbjct: 230 -VKVNPITTEQFPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFL 276 >gi|146280478|ref|YP_001170631.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|14717006|emb|CAC44168.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri] gi|145568683|gb|ABP77789.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 304 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 113/280 (40%), Positives = 159/280 (56%), Gaps = 2/280 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L S +++ +G +DL P+ PD+IIN AAY Sbjct: 1 MKILITGSKGQLARELQSELAGTGKLLALGHNALDLAVPEQIREQVRLLRPDLIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E AF++NA G +A+ A +G+P I+ STDYVFDG P DE NP Sbjct: 61 TAVDPAETHREQAFAVNARGPQVLAEEAARLGVPLIHYSTDYVFDGRKTEPYDEHDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ + + ++ILRT+WVYS G NFLL+M RL +ER +SVV D+ G Sbjct: 121 LGVYGASKLAGEQAIQAVGGEHLILRTSWVYSQHGKNFLLTMQRLLQERDALSVVSDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR ++ G++H+TA G SW FA I + G Sbjct: 181 APTWAATIARVTAELVRKR-NAGQAGPSGLYHLTAS-GETSWYGFACSIAERLRQEGRLR 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +++ I +K YPT A RP S L+C++L +++ W+ Sbjct: 239 AEITPILSKDYPTAAQRPLNSRLNCARLQQDWGVQLPDWE 278 >gi|329897710|ref|ZP_08272188.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] gi|328921057|gb|EGG28469.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] Length = 301 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 171/293 (58%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K LV G+NGQ+ + + I R +D+ + A P V+IN AA Sbjct: 8 VKILVTGSNGQVGHDFKCLAENSRHDWICFDRKGLDISDEQQVADVIARERPHVVINCAA 67 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP+ AF+INA GA +AKA + G I+ISTDYVF G + P +E PT Sbjct: 68 YTAVDKAESEPDRAFAINAYGAANLAKACQAHGAALIHISTDYVFAGDTLAPYEESDPTG 127 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKLAGE+ +A Y ++ILRTAWV+ G+NF+ +MLRL ER E+ VV DQ+ Sbjct: 128 PTGIYGESKLAGEQAIAEYLERHIILRTAWVFGAHGNNFVKTMLRLGAERDELGVVADQW 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGP-VSWADFAEYIFWESAER 236 G PTSA IA + IA +I+ D + GI+H T G P SW FAE IF ++ Sbjct: 188 GAPTSAAGIAACCLAIA-EIIDAKDCAEIPWGIYHFT--GLPSTSWHGFAEKIFKDAVAI 244 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G KV I + Q+PT A RP+ S LDCSK+ N I W++ + ++L Sbjct: 245 GLLDKAPKVNAISSDQFPTPAKRPSNSQLDCSKIFNCFQITPDNWEDRLLDVL 297 >gi|50982341|gb|AAT91794.1| putative dTDP-L-rhamnose processing protein [Yersinia enterocolitica] Length = 292 Score = 215 bits (548), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 179/291 (61%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ ++ G +GQ+ SL QD VE++ GR ++D+ F PD IIN A Sbjct: 1 MRVIITGAHGQVGCSLVEKFQDQDKVELLATGRDELDITNQSAVDEIIEQFKPDYIINSA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+E E++++IN +G +AKAA+ +G ++ISTDYVFDG + +E SPT Sbjct: 61 AYTAVDKAEEEIELSYAINHDGVAHLAKAANKMGAVLLHISTDYVFDGENEAAYEETSPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYGKSKLAGE +A + ++I+RT+WV+ G+NF+ +MLRL +S+V DQ Sbjct: 121 KPKSIYGKSKLAGELAIAEAMDKFLIVRTSWVFGTHGNNFVKTMLRLGTTHECLSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT + IA A++++ I++ +T G +H + G P VSW +FA+ IF ++ ++ Sbjct: 181 FGGPTYSDDIANALVKMV-KFIDDGNTPEWGCYHFS--GEPHVSWYEFAKVIFNKARDKK 237 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T +YPT+A RPA S L+C+K+ NI S W+ + NI Sbjct: 238 IIDKLPTLSPINTSEYPTRASRPANSRLNCNKIKAQFNIEPSNWQVALNNI 288 >gi|320325877|gb|EFW81937.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. B076] gi|320330328|gb|EFW86311.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 301 Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 119/301 (39%), Positives = 170/301 (56%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVAVLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I H + + D+ +L G++H+ A G SW FA ++ E A Sbjct: 181 ADQYGAPTGAELIADVTAHILHRVSGDQDSATLAGVYHLAA-AGETSWHGFARFVL-EHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ER G K+ I T+ YP A RP S L KL T +++ W++G + +L Sbjct: 239 ERNGVQLKVSSDKIGAIPTEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|303252479|ref|ZP_07338643.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248514|ref|ZP_07530532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648680|gb|EFL78872.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854990|gb|EFM87175.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 291 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 170/290 (58%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +++ V R ++D+ F PDVIIN AA+T Sbjct: 3 RFLITGAKGQVGYCLTKQLQSKADVLAVDRDELDITNRDAVFKVVREFHPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ I ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEIELSEAINVKGPQYLAEAANEIDAIILHISTDYVFEGTGSGEYKENDEPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRLAKER + +V DQFG Sbjct: 123 GVYGKTKLAGEIAVQQANKRHIILRTAWVFGEHGNNFVKTMLRLAKERESLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER---- 236 PT A IA ++I IA N+I NS + G++H T G P VSWADFA+ IF E+ + Sbjct: 183 PTYAGDIASSLIHIA-NIILNSKIDVFGVYHFT--GKPYVSWADFAKKIFDEAVSQKVLE 239 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA S LD +K+ I+ S W++ ++NI Sbjct: 240 KAPL--VNFIATSNYPTSAKRPANSRLDLTKIDEVFGIKPSNWQQALKNI 287 >gi|167623419|ref|YP_001673713.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167353441|gb|ABZ76054.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 175/291 (60%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ SL+ +D ++ + R +D+ + + F P +IIN A Sbjct: 1 MRVLITGCNGQVGCSLTEQLAKDTNTTVLALDRDYLDITNLDAVHAAVVEFKPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E E++++IN +G +A+AA +G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVELSYAINRDGPKYLAQAAQDVGAAILHISTDYVFEGNKVGEYVESDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRL R ++VV DQ Sbjct: 121 NPQGVYGESKLAGEVAVAQACDKHIILRTAWVFGENGNNFVKTMLRLGTTRDALNVVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+IQIA N I D G++H + G P VSW +FAE IF + E+G Sbjct: 181 FGGPTYAGDIANALIQIA-NRITQGDAIEYGVYHFS--GLPHVSWYEFAETIFDIAIEKG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + I T+QYPT A RP+ SCL+ K+ + I S WK + NI Sbjct: 238 VLKKRPSLSNIKTEQYPTPAKRPSNSCLNTDKITSVFAIEASDWKVALNNI 288 >gi|150376858|ref|YP_001313454.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] gi|150031405|gb|ABR63521.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] Length = 300 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 122/285 (42%), Positives = 169/285 (59%), Gaps = 3/285 (1%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G GQ+A+SL + + E+I +GRP +DL P + PD++++ A Sbjct: 1 MRIVVTGCKGQLARSLLEQARGLPGTEVILIGRPQLDLTDPPTILAAIEPHRPDLVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE EPE AF++NA GA A+A AA S+G P +++STDYVFDG E Sbjct: 61 AFTAVDQAEGEPETAFAVNAFGAEAVAGAAASLGAPVLHVSTDYVFDGSKHGSYAEDDMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YG SKLAGE VA +VILRT WVYS FG NF+ ++LRLA ER EI+VV DQ Sbjct: 121 APVSVYGASKLAGELAVAEANPRHVILRTGWVYSPFGKNFIKTILRLAGEREEIAVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL +A AI+ I+ L + G++H+ A G S AD A + S GG Sbjct: 181 WGNPTSALDLADAILGISAQLTRCGRDFVFGLYHL-AGAGTTSRADLARHALSASRAEGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P++ V + T +PT A RP S L +K + W+ V Sbjct: 240 PWAHVRDVATSAFPTPARRPTNSSLSSAKFTAAFRWSMPPWQYSV 284 >gi|242240690|ref|YP_002988871.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech703] gi|242132747|gb|ACS87049.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech703] Length = 290 Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 170/289 (58%), Gaps = 6/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+ Q L S E++ GR +D+ +F+PD IIN AAY Sbjct: 1 MRILITGSQGQLGQHLVSYLNGKAELLATGRDSLDITNKNQVIDKVKTFNPDYIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AED+ E ++IN +G +A+AA+ ++ISTDYVFDG + P E PT+P Sbjct: 61 TAVDNAEDDSERCYAINRDGPAHLAEAANIANAVLLHISTDYVFDGRAEQPYTEDMPTHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKLAGE+ VA ++I+RT+WV+ +G+NF+ ++LRLA R +++V DQFG Sbjct: 121 LNVYGASKLAGEQAVAEIARKFLIIRTSWVFGEYGNNFVKAILRLAATRNMLNIVNDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG-- 237 PT + IA +I++ H IE +T GI+H + G P VSW +FA I ++ Sbjct: 181 GPTYSGDIANTLIELIH-YIEQGNTPAWGIYHYS--GTPAVSWFEFAGAILEQAKAHNLL 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 Y K+ I + YPTKA RPA S L+C ++ + S W + +I Sbjct: 238 EAYPKLSGIPSVDYPTKAKRPANSVLNCDRITKQFGLAPSQWLSAINDI 286 >gi|84386938|ref|ZP_00989962.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] gi|84378228|gb|EAP95087.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] Length = 293 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 121/291 (41%), Positives = 175/291 (60%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ SL+ ++ E++ + R +D+ + F P +IIN A Sbjct: 1 MRILITGCHGQVGSSLTEQLANYENTEVLALDREHLDITSQDAVNAAVAEFKPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+AA S+G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEADLSYAINRDGPKYLAQAAQSVGAAILHISTDYVFEGNKAGEYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YGKSKLAGE VA + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGKSKLAGESAVAEACDKHIILRTAWVFGESGNNFVKTMLRLGENRNALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+IQIA I D G++H + G P VSW DFA+ IF + E+G Sbjct: 181 FGGPTYAGDIANALIQIAKR-INQGDVVEYGVYHYS--GLPHVSWFDFADAIFDVAVEQG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ S L K+ +++ S WK + NI Sbjct: 238 VLANKPSLTSITTDQYPTPAKRPSNSRLSTEKITLGFSVKESDWKAELNNI 288 >gi|330899786|gb|EGH31205.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 301 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 118/300 (39%), Positives = 170/300 (56%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEEQWQES 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H + + + +L GI+H+ A G SW FA+++ +A Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAA 239 Query: 235 ERGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YP A RP S L SKL +++ +W++G + +L I Sbjct: 240 LNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDEI 299 >gi|330967439|gb|EGH67699.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 301 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 121/301 (40%), Positives = 170/301 (56%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL--KPKDFASFFLS---FSPDVII 55 MK L++G NGQ+ L E+I + R D L D ++ +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLGGLTVTIRTLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVALLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLAAERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I ++ + D+ +L GI+H+ A G SW FA + E A Sbjct: 181 ADQYGAPTGAELIADVTAHILRRVLGDQDSAALAGIYHLAA-AGETSWHGFARLVL-EHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ER G KV I T+ YP A RP S L KL T +++ W++G + +L Sbjct: 239 ERNGVALKVSADKVGAIATEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|285019454|ref|YP_003377165.1| dtdp-4-dehydrorhamnose reductase [Xanthomonas albilineans GPE PC73] gi|283474672|emb|CBA17171.1| probable dtdp-4-dehydrorhamnose reductase protein [Xanthomonas albilineans] Length = 304 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/299 (40%), Positives = 168/299 (56%), Gaps = 17/299 (5%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQD--VEIIRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q L ++ Q + R GR PD D +P+D Sbjct: 1 MTVLVFGANGQVGQELLRALAAQGPVLATTRSGRLPDGRACERTDFDRPQDLGGLLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + + A NA+ G IA + +P ++ STDYVFDG Sbjct: 61 PAAVVNAAAYTAVDRAEQDTDAAHRANAQSPGIIADWCAAHAVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E +PT PL +YG +KLAGEE + + +++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYPEDAPTAPLGVYGATKLAGEEAIRASGAHHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA+ AH L + + T G +H+TA G +W FAE IF Sbjct: 181 ELRVVADQVGTPTPAALIAQV---TAHALAQRA-TLPSGTWHLTA-AGETTWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ G +V I T +YPT A RPAYS LD SKL ++ + W++G+R ++ Sbjct: 236 ADAVAAGLLPRTPRVLPIATTEYPTPAKRPAYSRLDVSKLQCDFSLELPQWRDGLRQVI 294 >gi|227113155|ref|ZP_03826811.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 281 Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + + EI+ ++D+ + A SF PD I+N AAY Sbjct: 1 MKILLTGANGQLGRCFQDRLPAEWEILATDSNELDITDLERVAEVVKSFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPEIA SIN G +A A + +++STDYVFDG + P +E S TNP Sbjct: 61 TAVDKAESEPEIAESINVHGPQNLAIVATKYNVRLVHVSTDYVFDGSATEPYNEDSATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KLAGE+ V + +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGNTKLAGEQAVTKISPEAIIVRTAWVFSEYGNNFVKTMLRLAKERDSLSIVNDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A+AII +L+E + ++ GI+H D VSW +FAE IF +A++ Sbjct: 181 CPTYAGDLAQAII----SLLEKN--AVGGIYHYCGD-EEVSWYEFAESIFTIAADKSRLI 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A+RPAYS L C ++ I +S W+ ++ + Sbjct: 234 DIPSLKPIPTTDYPTPAYRPAYSTLACDRVKKL-GISLSRWENALQKTI 281 >gi|332561401|ref|ZP_08415716.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides WS8N] gi|332274200|gb|EGJ19517.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides WS8N] Length = 283 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 167/288 (57%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L+ Q + +GR + DL P+ A PD +IN AA+TAV Sbjct: 3 LVFGRTGQVARELAR---QAPDARFLGRDEADLADPEACARAIREAKPDAVINAAAWTAV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE+E +A +N E GA+A+A +GIP + ISTDYVFDG P P PL Sbjct: 60 DQAEEEEALATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGA 119 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G PT Sbjct: 120 YGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A + +A L D L G +H++ GGP VSWADFA IF ++ Sbjct: 180 PAADIAAACLAMARGLAARPD--LSGTYHLS--GGPDVSWADFAREIFRQAEL----ACL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|325279645|ref|YP_004252187.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM 20712] gi|324311454|gb|ADY32007.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM 20712] Length = 293 Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/288 (42%), Positives = 168/288 (58%), Gaps = 9/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + E+ ++D+ F D IIN AAYTA Sbjct: 5 LITGANGQLGSELRKIGFSPLDEVFFTDVAELDITDYTAIEKFIQVHEVDTIINCAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AEDEP A IN + +AKAA I+ISTDYVFDG + TP E T P++ Sbjct: 65 VDRAEDEPGPAAEINTQAVANLAKAAQKGDCLLIHISTDYVFDGTATTPYTEKIKTCPVS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK+KLAGEE + Y+I+RTAW+YS FG NF+ ++LRLA+ER EI+VV DQ GTP Sbjct: 125 VYGKTKLAGEEAIIRSGCFYIIIRTAWLYSAFGHNFVKTILRLAEERPEINVVNDQIGTP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +A+AI++I N + GI+H + + G SW DFA I S G + Sbjct: 185 TYAEDLAKAIVKIMAN---DDRVEHEGIYHYS-NAGVCSWYDFAVEIVRLS----GLNCR 236 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +YPTK HRPAYS LD +K+ +T + + W+E +R ++ I Sbjct: 237 VNPVTTAEYPTKTHRPAYSVLDKTKIKHTFGVEVPEWQEALRRMMGEI 284 >gi|309274611|gb|ADO64235.1| RmlD [Vibrio vulnificus] Length = 294 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 173/290 (59%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L+ E++ + +D+ + + F P+ IIN AA+ Sbjct: 5 MKVLITGCNGQVGHCLTERLKTQAEVLALDYEGLDITNREAVFNTVAEFKPNYIINAAAH 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E +++F+IN +G +A+A++ G ++ISTDYVFDG+ P E T P Sbjct: 65 TAVDRAEQEVKLSFAINRDGPSYLAQASNECGAVMLHISTDYVFDGMGDKPYQESDSTRP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ VA ++ILRTAWV+ G+NF+ +MLRLA+ E+S+V DQFG Sbjct: 125 QGVYGQSKLAGEQAVAEACPKHLILRTAWVFGEHGNNFVKTMLRLAQSCDELSIVGDQFG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA +I + N IE + G++H + G P VSW DFA IF ++AE+ Sbjct: 185 GPTYAGDIADTLITMVQN-IEQGNKLKWGVYHFS--GMPYVSWYDFASAIF-QAAEQHKM 240 Query: 240 YSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 K + I T YPT A RPA S LDC+K+ N +I+ S W+ + NI Sbjct: 241 LDKQPLLSSIPTSAYPTPAKRPANSRLDCAKIENQFSIKPSDWQAALNNI 290 >gi|190150742|ref|YP_001969267.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307250738|ref|ZP_07532672.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307264144|ref|ZP_07545738.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915873|gb|ACE62125.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306857242|gb|EFM89364.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306870518|gb|EFN02268.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 291 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 124/290 (42%), Positives = 170/290 (58%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +I+ V R ++D+ K + F PDVIIN AA+T Sbjct: 3 RFLITGAKGQVGHCLTKQLQGKADILAVDREELDITKRDAVFNVVREFRPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ + ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEVELSEAINVKGPQYLAEAANEVDAIILHISTDYVFEGTGSGEYKENDEPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRL KER + +V DQFG Sbjct: 123 GVYGKTKLAGEIAVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGKERDVLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER---- 236 PT A IA+A+IQIA N I T + GI+H T G P VSWADFA IF E+ + Sbjct: 183 PTYAGDIAKALIQIA-NAIMGGRTDVFGIYHFT--GKPYVSWADFANAIFDEAVLQKVIE 239 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA S LD +K+ I+ S W++ ++NI Sbjct: 240 KAPL--VNFISTSDYPTPAKRPANSRLDLTKIDIVFGIKPSNWQQALKNI 287 >gi|118595026|ref|ZP_01552373.1| dTDP-4-dehydrorhamnose reductase [Methylophilales bacterium HTCC2181] gi|118440804|gb|EAV47431.1| dTDP-4-dehydrorhamnose reductase [Methylophilales bacterium HTCC2181] Length = 299 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/279 (41%), Positives = 158/279 (56%), Gaps = 7/279 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ +L + D E++ + R D DL +P PD+IINP AY Sbjct: 1 MKILITGINGQVGHALMQQ-LNDHELVGLTRKDCDLTEPDQIRKAIDHHQPDLIINPGAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AEDEP++AF IN + +A+ A IP I+ STDYVFDG + E PTNP Sbjct: 60 TKVDQAEDEPKLAFLINRDAPKVMAEKAREYDIPFIHFSTDYVFDGEKKGAYKEDDPTNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGEE + + + I RT+WVYS G NF L+M RL+++ EI VV DQFG Sbjct: 120 LGVYGASKWAGEEAIQNVGGKFYIFRTSWVYSDRGHNFYLTMKRLSEKPDEIRVVSDQFG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS IA+ N+++ ++ GI+H+ DG SW +FA I ++ Sbjct: 180 VPTSNFFIAKH----TQNIMKQLNSKNTGIYHLVPDGQS-SWCEFARQIITKTTPTFN-L 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + I T QYPT+A RP S LD SK+ I+ TW Sbjct: 234 KNLLPINTDQYPTRAKRPRSSVLDNSKIKAVFMIKFDTW 272 >gi|153829572|ref|ZP_01982239.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 623-39] gi|148874968|gb|EDL73103.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 623-39] Length = 296 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 179/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ AQ LS+M ++VE + + R +D+ P + F P++IIN Sbjct: 2 MRILVTGSRGQVGHFLAQQLSTM--KEVEFLAIDRDQLDITHPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ+G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQYGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|116749692|ref|YP_846379.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] gi|116698756|gb|ABK17944.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/284 (39%), Positives = 167/284 (58%), Gaps = 3/284 (1%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+IG+ G + L+ + Q + V R ++D+ P++ + P ++IN AAY Sbjct: 3 KILIIGHRGMLGTDLTERLRSQGFAVEGVDRDELDIAVPEEVLRCLETIRPRLVINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP AF++N +G IA A + P I+ISTDYVFDG + P E P NP Sbjct: 63 TAVDRAEGEPGAAFAVNRDGPAHIAAACGRLNSPLIHISTDYVFDGRASAPYKEDDPVNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SK GE V S N++I+RTAW++ G++F+ ++LRLA ER E+ +V DQ+G Sbjct: 123 VSVYGRSKWEGEAAVRSRLQNHLIVRTAWLFGANGNSFVKTILRLAAERAELRIVSDQYG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA-ERGGP 239 PT +A A+ ++ +++ + T G +H G VSW +FA I SA RGG Sbjct: 183 CPTWTGDLASALTGLSKRVLDGARTVPWGTYHYCGKGA-VSWYEFARAIVEASAFARGGK 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I T YP A RPA+S LDC K+A+ I +W+EG+ Sbjct: 242 MPAVVPIATADYPLPARRPAWSVLDCGKMASEFGIEPVSWREGL 285 >gi|7592817|dbj|BAA94404.1| dTDP-6-deoxy-L-lyxo-4-hexulose redactase [Actinobacillus actinomycetemcomitans] Length = 292 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/290 (42%), Positives = 165/290 (56%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGRHEILAVDHDELDITNQSAVKKTVENFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E +P Sbjct: 63 AVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAADPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG--- 237 PT A IA A+IQIA +I GI+H T G P VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIAGESVEY-GIYHFT--GEPYVSWCDFARAIFDEAVSQNMLE 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 KAPL--VNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|300866608|ref|ZP_07111296.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] gi|300335380|emb|CBN56456.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] Length = 290 Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 168/291 (57%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+AQ L + + E+I R DL +P P++++N AAY Sbjct: 1 MKILLTGSGGQLAQELEPILLSAGEVIAGDRTFFDLSQPDSIHQLMGEIKPNLVVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++N G +A+ + +G I+ISTDYVF G P E TNP Sbjct: 61 TAVDKAESEPELANAVNGIAPGILAEECEKLGATLIHISTDYVFGGSQGYPYCETDTTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQF 179 L +YGKSKLAGE + + ++I+RTAWVY G NF+ +MLRL K+R EI VV DQ Sbjct: 121 LGVYGKSKLAGELSIIKALDRHIIIRTAWVYGNGGKGNFVKTMLRLGKDREEIRVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A AI QI ++ + G +H T + G SW DFA IF E A++ G Sbjct: 181 GSPTWTGDLAAAISQITSSI----RPEIFGTYHYT-NSGVASWYDFAVAIF-EEAKQLGF 234 Query: 240 YSKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV R+ T +YPT A RPAYS L +K++ W+EG+R +L Sbjct: 235 SLKVKRVIPITTPEYPTPAKRPAYSVLSSTKISAVLGSHPPHWREGLRQML 285 >gi|221634577|ref|YP_002523265.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides KD131] gi|221163450|gb|ACM04412.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides KD131] Length = 283 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 167/288 (57%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L+ Q + +GR + DL P+ A PD +IN AA+TAV Sbjct: 3 LVFGRTGQVARELAR---QAPDARFLGRDEADLADPEACARAIREAKPDAVINAAAWTAV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE+E A +N E GA+A+A ++GIP + ISTDYVFDG P P PL Sbjct: 60 DRAEEEEAPATVVNGEAPGAMARACAALGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGA 119 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G PT Sbjct: 120 YGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A + +A L D L G +H++ GGP VSWADFA IF ++ Sbjct: 180 PAADIAAACLAMARGLAARPD--LSGTYHLS--GGPDVSWADFAREIFRQAEL----ACL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|313201255|ref|YP_004039913.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688] gi|312440571|gb|ADQ84677.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688] Length = 301 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 118/295 (40%), Positives = 164/295 (55%), Gaps = 14/295 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ +L M + + R +DL + PDVI+NPAAYT Sbjct: 5 RILLTGVHGQVGHALLPMLATWGTVTALDRAALDLSDEAAIRKTVRTLRPDVIVNPAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A++INAE +A+ A +G ++ STDYVFDG + P E TNPL Sbjct: 65 AVDKAETEPELAYAINAEAPRILAEEAAELGARMVHYSTDYVFDGRASKPYRETDMTNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+ V ++ILRT+WVY +G NFL ++LRLA+ER + +V DQ G Sbjct: 125 GVYGASKLAGEQAVQQAGAQHLILRTSWVYGAYGKNFLHTILRLARERDSLGIVADQLGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE----SAERG 237 PTS+ IA A + L+++ GI+H+T + G SW FA I AERG Sbjct: 185 PTSSHDIASATL----TLLKSWQPERSGIYHLT-NSGYTSWHGFAVAILQAYEGLQAERG 239 Query: 238 GP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V I T +YPT A RPA S LD L +R+ W++ + ++ Sbjct: 240 WPPLRVSSEAVRAITTAEYPTPAARPANSRLDGDLLEQDWGLRLQDWRQALVQVM 294 >gi|28170139|gb|AAM34818.1| dTDP-4-keto-L-rhamnose reductase [Vibrio vulnificus] Length = 290 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 121/290 (41%), Positives = 171/290 (58%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L+ E++ + +D+ + + F P+ IIN AAY Sbjct: 1 MKVLITGCNGQVGHCLTERLKTQAEVLALDYEGLDITNREAVFNTVAEFKPNYIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E +++F+IN +G +A+A++ G ++ISTDYVFDG+ P E T P Sbjct: 61 TAVDRAEQEVKLSFAINRDGPSYLAQASNECGAVMLHISTDYVFDGMGDKPYQEGDNTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ VA ++ILRTAWV+ G+NF+ +MLRLA+ R E+S+V DQFG Sbjct: 121 QGVYGQSKLAGEQAVAEACPEHLILRTAWVFGEHGNNFVKTMLRLAQSRDELSIVGDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A+I + IE G++H + G P SW DFA IF ++AE+ Sbjct: 181 GPTYAGDIADALIAMVQ-YIELGSKPKWGVYHFS--GMPYASWYDFASAIF-QAAEQHKM 236 Query: 240 YSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 K + I T YPT A RPA S LDC+K+ N I+ S W+ + NI Sbjct: 237 LDKQPLLSSIPTSAYPTPAKRPANSRLDCAKIENQFGIKPSDWQVALNNI 286 >gi|70733808|ref|YP_257448.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] gi|68348107|gb|AAY95713.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] Length = 293 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L+ G +GQ+++ L E++ +GR +DL P+ + PD+IIN AA+ Sbjct: 5 LKILISGQHGQVSRELQQRLGDLGELVVLGREQLDLSHPEQIRQQVRAIRPDLIINAAAH 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+A+ EP++AF+INA G A+ A +G+P I+ STDYVFDG TP E NP Sbjct: 65 TAVDQAQSEPDLAFAINATAPGIFAQEAFELGVPLIHYSTDYVFDGSKETPYVEDDEPNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SKLAGE + ++ILRT+WVYS G NFLL+M RL +E+ E+ VV DQ G Sbjct: 125 LSVYGESKLAGERAIRLVQGQHLILRTSWVYSSHGKNFLLTMQRLLQEKPELRVVADQIG 184 Query: 181 TPTSALQIA---RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT A IA RA+I+ GI+H+TA G SW FA+ I + Sbjct: 185 APTWAGTIATSTRALIE----RWRAGQPGAWGIYHLTAH-GETSWFGFAQAIGEQLLAMD 239 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + + I + YPT A RP S LDCS+LA + W +R L Sbjct: 240 KPCAVLEAIPSSAYPTPAPRPLNSRLDCSRLAREWGVVQPDWHTALRECLAE 291 >gi|12232610|gb|AAG49405.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans] Length = 292 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 123/290 (42%), Positives = 165/290 (56%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGRHEILAVDHDELDITNQSAVKKTVENFCPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E +P Sbjct: 63 AVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAADPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG--- 237 PT A IA A+IQIA +I GI+H T G P VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIAGESVEY-GIYHFT--GLPYVSWCDFARAIFDEAVSQNMLE 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 KAPL--VNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|15836863|ref|NP_297551.1| dTDP-4-keto-L-rhamnose reductase [Xylella fastidiosa 9a5c] gi|9105073|gb|AAF83071.1|AE003879_6 dTDP-4-keto-L-rhamnose reductase [Xylella fastidiosa 9a5c] Length = 302 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/303 (42%), Positives = 164/303 (54%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGRECVQADFDRPETLRPLLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG Sbjct: 59 RPAQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCARHGVPLVHYSTDYVFDGQGT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 119 SPYGVDDPVAPLNIYGASKLAGERAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATS 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT+A IA Q+ L + GI+H+TA G SW FAE I Sbjct: 179 ERLPVVADQIGTPTAAGLIADVTAQL---LAGGGQSRHAGIWHLTAT-GQTSWHGFAEEI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F ++ G +V I + YPT A RPAYSCLD + L T I + W++GVR +L Sbjct: 235 FAQAQACGLMMRVPQVQAIASVGYPTAARRPAYSCLDTTALVETFGIVLPDWRQGVRGVL 294 Query: 288 VNI 290 +I Sbjct: 295 DDI 297 >gi|29726016|gb|AAO88943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 295 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 126/294 (42%), Positives = 177/294 (60%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLEAD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER-REISVV 175 PT PL +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA + E+S+V Sbjct: 120 PTAPLGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAADTCHELSIV 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESA 234 DQFG PT A IA A+ IA I D+ GI+H + G P VSW FA+ IF + Sbjct: 180 GDQFGGPTYAGDIASALATIARK-ISKGDSIEYGIYHYS--GTPHVSWCQFADAIFDLAV 236 Query: 235 ERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E+G SK + + T+QYPT A RPA S + K+ N I+ S W +++I Sbjct: 237 EQGVLSSKPIIKSVTTEQYPTLAKRPANSKMSNKKIENKLGIKGSDWHAALKDI 290 >gi|225873477|ref|YP_002754936.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium capsulatum ATCC 51196] gi|225792581|gb|ACO32671.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium capsulatum ATCC 51196] Length = 301 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 164/293 (55%), Gaps = 8/293 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +++G+ GQ+ L E++ R DL +P P V++ AAYT Sbjct: 5 KAMILGSTGQVGVELQRSFAGYGEVLAYDRSQADLTRPGAIIETIRQQKPSVVLLAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A ++NAE G +A+A I + STDYVFDG R P E PL Sbjct: 65 AVDKAESEPELAMAVNAEAPGLLAQACAESDILFVTYSTDYVFDGSKREPWVESDEPRPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKL GE +V ++I RT+WVY G NF L+MLRL KER E+S+V DQ G+ Sbjct: 125 NMYGRSKLEGERRVQQAGGRHLIFRTSWVYGPHGKNFFLTMLRLGKEREELSIVADQTGS 184 Query: 182 PTSALQIA---RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER-G 237 PTS++ IA R ++ L + GI+HMT G +W +FA +IF E A++ Sbjct: 185 PTSSIAIAAATRTVVDRMEGLSSAEAAARSGIYHMTC-AGSTNWYEFARHIFSECADQLE 243 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG---VRNIL 287 G ++ + + YPT A RP+YS + L+N ++R+ W++ V+N L Sbjct: 244 GRQPRLRPLKAEDYPTPAKRPSYSVMSNEMLSNAWDVRLPAWQDAFATVKNRL 296 >gi|149203264|ref|ZP_01880234.1| dTDP-4-dehydrorhamnose reductase [Roseovarius sp. TM1035] gi|149143097|gb|EDM31136.1| dTDP-4-dehydrorhamnose reductase [Roseovarius sp. TM1035] Length = 281 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 162/291 (55%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+A + + E+ +GR DL P A +PD++IN AAY Sbjct: 1 MRILVFGRTGQVATEMQ----RQAEVTALGREVADLSDPMACAEAIRDHAPDLVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++A IN GA+A+A ++GIP ++STDYVFDG P P P Sbjct: 57 TAVDRAESEEDLATVINGVAPGAMARACANLGIPFCHVSTDYVFDGSGAAPRAPSDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE V + ILRT+WV+S G NF+ +MLRL++ R +SVV DQ G Sbjct: 117 CNAYGRSKLAGEEAVRAAGGQAAILRTSWVFSAHGGNFVKTMLRLSETRDALSVVDDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A++ + ++ G++H + G P SWADFA IF ++ G Sbjct: 177 GPTPAADIAAALLSMGRAMVAGHAG---GLYHFS--GAPDASWADFAREIFAQA----GR 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T+ YPT A RP S LDC LA I W+ G+ +L + Sbjct: 228 VTVVTGIPTRDYPTPAARPQNSRLDCGSLAAEFGIGRPDWRAGLARVLKEL 278 >gi|229175940|ref|ZP_04303437.1| hypothetical protein bcere0006_50100 [Bacillus cereus MM3] gi|228607534|gb|EEK64859.1| hypothetical protein bcere0006_50100 [Bacillus cereus MM3] Length = 280 Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 169/289 (58%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G GQ+AQ L + D+++ + R ++D+ + ++ PD I++ AA Sbjct: 1 MKVIVTGAKGQLAQDVLKQLEHTDLQVYGIDREELDITNNEAVQAYINKIKPDAIMHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++ E A+ +N G +A+AA IG +YISTDYVFDG ++ P + PT Sbjct: 61 YTNVDAAEEDAETAYKVNGLGTKYLAQAAGEIGAKMLYISTDYVFDGTAKNPYETSEPTK 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++KLAGE V Y + + I+RTAWV+ IFG+NF+ +MLRL KE EISVV DQ Sbjct: 121 PLGVYGETKLAGETFVQQYVDKFFIVRTAWVFGIFGNNFVKTMLRLGKEHDEISVVHDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR +I++ + GI+H T + G SW +FA IF + G Sbjct: 181 GSPTYTVDLARFMIELIR-------SEKYGIYHAT-NTGVCSWYEFAVEIF----NQAGI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + T+++P A RP YS L K+ + + WKE ++ L+ Sbjct: 229 EVKVNPVTTEEFPRPAARPHYSVLSKQKIEDEGFSSLQDWKEALKAYLL 277 >gi|125654614|ref|YP_001033808.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides 2.4.1] gi|77386274|gb|ABA81703.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides 2.4.1] Length = 283 Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 166/288 (57%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L+ Q + +GR + DL P+ A PD +IN AA+TAV Sbjct: 3 LVFGRTGQVARELAR---QAPDARFLGRDEADLADPEACARAIREAKPDAVINAAAWTAV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE+E A +N E GA+A+A +GIP + ISTDYVFDG P P PL Sbjct: 60 DRAEEEEAPATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGA 119 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G PT Sbjct: 120 YGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A + +A L D L G +H++ GGP VSWADFA IF ++ Sbjct: 180 PAADIAAACLAMARGLAARPD--LSGTYHLS--GGPDVSWADFAREIFRQAELD----CL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|50120379|ref|YP_049546.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium atrosepticum SCRI1043] gi|49610905|emb|CAG74350.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium atrosepticum SCRI1043] Length = 283 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 121/289 (41%), Positives = 169/289 (58%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + +I ++D+ + + PD I+N AAY Sbjct: 1 MKILLTGANGQLGRCFQDRLPTHWQIWSTDANELDITDLTQIEAAIARYQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E +A IN G +A A GI +++STDYVFDG + TP E S TNP Sbjct: 61 TAVDKAESESVLAEKINVTGPHNLATVAHQKGIRLVHVSTDYVFDGNATTPYLESSTTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAGE+ V + +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGKTKLAGEQAVTKAAPDAIIVRTAWVFSEYGNNFVKTMLRLAKERDALSIVADQKG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A+AII +LIE + GI+H D VSW +FA+ IF + ++ Sbjct: 181 CPTYAGDLAQAII----SLIEKNAEC--GIYHYCGD-KEVSWYEFAKTIFEMAKQQDIID 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T+QYPT AHRP YS L C K+A I+ S W + + +L Sbjct: 234 KQPQLTAITTEQYPTPAHRPQYSSLSCEKIARL-TIKPSDWTDALSQVL 281 >gi|319953123|ref|YP_004164390.1| dtdp-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237] gi|319421783|gb|ADV48892.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237] Length = 295 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 120/289 (41%), Positives = 169/289 (58%), Gaps = 12/289 (4%) Query: 4 LVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+A+ L +S + ++D+ K+ + F + D IN AAYT Sbjct: 8 LVTGANGQLARCLKDASRDYPNYNFFFKTSKELDITNEKEIQTLFTELNFDYCINCAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E AF +NAEG +AKA S I+ISTD+VFDG +P E TNP+ Sbjct: 68 AVDKAEDDKENAFLVNAEGVKFLAKACKSFETVLIHISTDFVFDGTKNSPYTENDITNPI 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKL GEE + + NY I+RT+WVYS FG+NF+ +ML+L K+R +SVV DQ G+ Sbjct: 128 NVYGASKLKGEEYIKNILENYFIIRTSWVYSEFGNNFVKTMLKLGKDRNNLSVVDDQIGS 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +AR I++I + SL H ++ G +SW +FA+ IF ES Sbjct: 188 PTFAEDLARLILEIIDS------NSLEYGIHNFSNDGEISWYEFAQEIFQESK----ISI 237 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + +YPTKA RP YS L K+ N + I WK ++ LV++ Sbjct: 238 ELKPLKSSEYPTKAKRPKYSVLSKLKIRNALSTEIPLWKNSLKKCLVSL 286 >gi|89073288|ref|ZP_01159818.1| dTDP-4-dehydrorhamnose reductase [Photobacterium sp. SKA34] gi|89050998|gb|EAR56462.1| dTDP-4-dehydrorhamnose reductase [Photobacterium sp. SKA34] Length = 296 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 123/294 (41%), Positives = 174/294 (59%), Gaps = 10/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ L + EI+ V R ++D+ D F P++IIN A Sbjct: 1 MKVLITGSNGQVGSCLVKQLQNCTNTEILAVDRTELDITSKSDVIKIVDEFKPNIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++FSIN +G +A+AA++IG ++ISTDYVF G E Sbjct: 61 AHTAVDKAETEIELSFSINRDGPLYLAQAAENIGAALLHISTDYVFAGDKEGTYSETDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG SKLAGE V + +ILRTAWV+ G+NF+ +MLRLA++R E+S+V DQ Sbjct: 121 DPQGVYGTSKLAGEIAVLEACSRTIILRTAWVFGEKGNNFVKTMLRLAQQRNELSIVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLI---ENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESA 234 FG PT A IA A+I IA N++ + D+S GI+H + G P SW FA+ IF ++ Sbjct: 181 FGGPTYAGDIAGALIIIAKNIMIQGADFDSSKYGIYHFS--GFPHTSWCGFAQKIFNKAV 238 Query: 235 ERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E+G V I T YPT A RPA S LD K+ ++++S W+ + + Sbjct: 239 EQGVLNKAPLVKGINTADYPTPAKRPANSKLDTKKIIEIFSVQVSDWERALNKL 292 >gi|209696412|ref|YP_002264343.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida LFI1238] gi|208010366|emb|CAQ80704.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida LFI1238] Length = 293 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 176/291 (60%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G GQ+ L++ V ++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCYGQVGHCLTAQLVNKASTSVLALDRDQLDITNQDAVNAIADDFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAEDE +++++IN +G +A+AA +G ++ISTDYVF+G DE T Sbjct: 61 AHTAVDKAEDEVDLSYAINRDGPNYLAQAAQRVGAAMLHISTDYVFEGNKVGEYDERDVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG+SKLAGE VA+ + ++ILRTAWV+ G+NF+ +MLRL R E+S+V DQ Sbjct: 121 HPQGVYGESKLAGESAVANACDKHIILRTAWVFGEHGNNFVKTMLRLGVTRDELSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I IA + + + G++H + G P VSW +FA+ IF + E+G Sbjct: 181 FGGPTYAGDIANALITIAERITQGNMVDY-GVYHYS--GLPHVSWYEFADAIFDTAKEQG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ SCL+ +K+ +I S W+ ++NI Sbjct: 238 VIKTKPSLTGITTVQYPTPAKRPSNSCLNTNKITTAFSIEASDWQTALKNI 288 >gi|72132991|gb|AAZ66344.1| RmlD [Listonella anguillarum] Length = 294 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 177/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G++GQ+ A L+SM DVE + V R +D+ P S F P++IIN Sbjct: 1 MRVLVTGSHGQVGYCLAHQLNSMV--DVEFLAVDREQLDITNPCHVNSVVNEFKPNIIIN 58 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G + E Sbjct: 59 AAAHTAVDRAEQEAELSYAINRDGPKHLAQAAHKVGAAILHISTDYVFSGDKPSAYIEAD 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+P +YGKSKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 119 STSPQGVYGKSKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVS 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ+G PT A IA A++ +A ++E T+ G++H + G P VSW DFA IF ++ E Sbjct: 179 DQYGGPTYAGDIANALLIMAKAIVEGKSTAF-GVYHFS--GTPHVSWYDFACAIFDKARE 235 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I TK YPT A RPA S L+ K+ + S W+ + +++ Sbjct: 236 QGLLNKPLQVNAITTKDYPTPAKRPANSKLETQKIHQHFGVVASDWRAALNHLI 289 >gi|53804350|ref|YP_113747.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str. Bath] gi|53758111|gb|AAU92402.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str. Bath] Length = 301 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 119/299 (39%), Positives = 166/299 (55%), Gaps = 10/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR---PDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV+G +GQ+A L E++ + R P IDL +P A+ + PD+I+N Sbjct: 1 MKILVVGRSGQLAWELRRTLACFGEVVALDRQSEPAIDLAEPGAVAALVRAVRPDLIVNA 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE EP++A+ +NAE +A A +GI I+ STDYVF G P E P Sbjct: 61 AAYTAVDRAEQEPDLAWKVNAEAPAVLAAEATRLGIGLIHYSTDYVFPGDGAVPYREDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N+YG+SKLAGE+ +A+ ++ILRTAWVY + G NFL +MLRL ER + V+ D Sbjct: 121 VGPRNVYGRSKLAGEQAIAASGAAHLILRTAWVYGVRGQNFLRTMLRLMAEREVVRVIDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSL---RGIFHMTADGGPVSWADFAEYIFWESA 234 QFG PT IA A + + + + L G++H+T G SW FA I + Sbjct: 181 QFGAPTWVRMIAEATAILVASSLRSGTADLAGASGVYHLTCS-GQTSWYGFACAIREHAV 239 Query: 235 ERG---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V I T +YPT A RPA+S LD KL I + W + + L ++ Sbjct: 240 AAGLLPDTAARVEAIPTSEYPTPAKRPAHSVLDLGKLEARFGIVLPVWDQALELCLADL 298 >gi|33637044|gb|AAQ23682.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 281 Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 168/291 (57%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G GQ+ L + + E+ GR ++D+ +PDV+I+ AA Sbjct: 1 MKVIVTGAKGQLGTDLVHLLADRGYEVYGYGREELDITNFDQVKQVISEVNPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE EP+ AF INA G +A A++++G +YISTDYVFDG + TP +EF+ TN Sbjct: 61 YTKVDLAESEPDQAFLINAYGTRNVAVASEAVGAKLVYISTDYVFDGTATTPYNEFALTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSKLAGE+ V + + I+RT+WVY G+NF+ +MLRLA+ER E+ VV DQ Sbjct: 121 PLSVYGKSKLAGEQFVRDLHSKFFIVRTSWVYGKHGNNFVKTMLRLAQERNELMVVNDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I++I T GI+H++ + G SW +FA+ IF E G Sbjct: 181 GCPTYTVDLANCILEIIQ-------TEKYGIYHVS-NSGHCSWYEFAKAIF----EEAGI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV TK +P A RPAYS + L + W+E ++ +V I Sbjct: 229 EVKVNPCTTKDFPRPAPRPAYSVFEHMALRLNGFNEMRNWREALKEFIVQI 279 >gi|289624736|ref|ZP_06457690.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648650|ref|ZP_06479993.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868865|gb|EGH03574.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 301 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 118/298 (39%), Positives = 170/298 (57%), Gaps = 13/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L ++I + R D L + A+ + +P +++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGDVIALDRQGTDGLCGDLTNLEGLAATVRALAPHIVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE E E+A IN + G +A+ A ++G I+ STDYVF+G P E Sbjct: 61 NAAAYTAVDKAETEQELAMLINGDAPGVLAREAATLGAWLIHYSTDYVFNGSGEKPWYEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 GHTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H ++ + D+ +L GI+H+ A G SW FA +I E A Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVLRDQDSAALAGIYHLAA-AGETSWHGFARFIL-EHA 238 Query: 235 ERGGPYSKVY-----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ER G KV I TK YP A RP S L +KL T +++ W++G + +L Sbjct: 239 ERSGVQLKVLPDKIGAIPTKAYPLPAPRPNNSRLALNKLETTFQLKMPPWQQGAQRML 296 >gi|149913026|ref|ZP_01901560.1| hypothetical protein RAZWK3B_03520 [Roseobacter sp. AzwK-3b] gi|149813432|gb|EDM73258.1| hypothetical protein RAZWK3B_03520 [Roseobacter sp. AzwK-3b] Length = 285 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 120/291 (41%), Positives = 168/291 (57%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A L++ + + + +GR + DL +P+ A+ + P +IN AAY Sbjct: 1 MSLLVFGKTGQVATELAA---RAPDAVFLGRTEADLSQPEACAAAITAHRPWAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A +NA+ A+A+A + GIP I+ISTDYVFDG P P P Sbjct: 58 TAVDRAEEEEALAHVVNADAPEAMARACAANGIPLIHISTDYVFDGAGTAPRATTDPVAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE +A + +LRT+WV+S G+NFL +MLRL++ R +++V DQ G Sbjct: 118 QNAYGRSKLAGEEAIAQAGGAFAVLRTSWVFSAHGANFLKTMLRLSESRDALNIVDDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A + IA + +D GI+H + G P VSW +FAE IF + R Sbjct: 178 GPTPAADIAAACLTIAEQM--RADPGKTGIYHFS--GAPDVSWKEFAETIFAMAGRR--- 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ I W+ GV ++L ++ Sbjct: 231 -VAVGGIPTADYPTPAARPLNSRLDCALTETVFGISRPDWRMGVGSVLKDL 280 >gi|262192434|ref|ZP_06050586.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93] gi|262031698|gb|EEY50284.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93] Length = 296 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 176/292 (60%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ SL +++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHSLVQQLSTMKEVEFLAVDRDQLDITHPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA+ +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAANKVGAVILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACLRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARDQG 238 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 239 ILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|29726001|gb|AAO88931.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 211 bits (538), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 178/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|146309306|ref|YP_001189771.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145577507|gb|ABP87039.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 287 Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L + ++ E++ +GR DL +P L P ++IN AAY Sbjct: 1 MKILISGHTGQVARELQ-LALRKHELVSLGRQAFDLSRPDSLRETILRERPALVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E+AFS+NAE G +A A + IP I+ STDYVFDG TP E +P Sbjct: 60 TAVDQAEQERELAFSVNAEAPGVMADACFELDIPLIHYSTDYVFDGSKATPYREADTPHP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE+ + +++ILRT+WVYS G NFLL+M RL +ER E+SVV DQ G Sbjct: 120 LGVYGASKAAGEQALRISGCDHLILRTSWVYSQHGRNFLLTMQRLLQEREELSVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A ++ + G +H+T G SW FA I G P Sbjct: 180 APTWAGSIASATTELIDKWQQGRHHW--GTYHLTCQ-GETSWFGFASAIAERLRAAGKPC 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I + +YPT A RP S LD +L +R+ W+ + L + Sbjct: 237 ARLRPIPSSEYPTPAQRPLNSRLDGERLEQEWQVRLPDWRAALDACLQRM 286 >gi|71898671|ref|ZP_00680841.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] gi|71731618|gb|EAO33679.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] Length = 302 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 165/303 (54%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGAGCVQADFGQPETLRALLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 59 RPAQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQAT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 119 SPYGVDDPVTPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATS 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE I Sbjct: 179 ECLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 235 FVQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVL 294 Query: 288 VNI 290 I Sbjct: 295 DEI 297 >gi|254286304|ref|ZP_04961263.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226] gi|150423719|gb|EDN15661.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226] Length = 296 Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 178/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQYFGVVASDWQTALNHLI 290 >gi|307246378|ref|ZP_07528454.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255364|ref|ZP_07537174.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259814|ref|ZP_07541532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852711|gb|EFM84940.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861673|gb|EFM93657.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866112|gb|EFM97982.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 291 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 166/290 (57%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +++ V R ++D+ F+P+VIIN AA+T Sbjct: 3 RFLITGAKGQVGYCLTKQLQSKADVLAVDRDELDITNRDAVFKIVREFNPNVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ I ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEIELSEAINVKGPQYLAEAANEIDAVILHISTDYVFEGTGSGEYKEDDKPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRL KER + +V DQFG Sbjct: 123 GVYGKTKLAGERVVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGKERESLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER---- 236 PT A IA A+IQIA N I N GI+H T G P VSWADFA IF E+ + Sbjct: 183 PTYAGDIANALIQIA-NTILNGKQDAFGIYHFT--GKPYVSWADFANTIFNEAVSQKVLE 239 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA S LD +K+ I+ S W+ ++NI Sbjct: 240 KAPL--VNFISTSDYPTPAKRPANSRLDLTKIDAVFGIKPSDWQRALKNI 287 >gi|319427034|gb|ADV55108.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens 200] Length = 291 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 122/291 (41%), Positives = 175/291 (60%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ +SL Q D+E + + R +D+ + F P+VIIN A Sbjct: 1 MKILITGSNGQVGRSLVKQLNQMPDIEFLAMDREQLDITDCEAVNKLVNEFKPNVIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +AKAA+S+G ++ISTDYVF G + E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAKAANSVGATILHISTDYVFAGDKQGEYSEDDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG+SKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E VV DQ Sbjct: 121 APQSVYGQSKLAGELAVAAANPRHIILRTAWVFCETGNNFVKTMLRLAQSRDEFGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I +A L ++ + G++H G P V+W FA IF ++ +G Sbjct: 181 FGGPTYAGDIAYALIAMAKVL--HAGNNNYGVYHFA--GLPHVNWHQFAVDIFKQANAQG 236 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +V I T QYPT A RPA S L+C K+ + I S W+ + N+ Sbjct: 237 ILHKELRVNAITTAQYPTTAKRPANSKLNCYKIGQSFGINPSDWQAALNNL 287 >gi|29725981|gb|AAO88915.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ AQ LS+M ++VE + + R +D+ + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLAQQLSTM--KEVEFLAIDRDQLDITHSAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ+G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQYGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|114798649|ref|YP_759508.1| dTDP-4-dehydrorhamnose reductase [Hyphomonas neptunium ATCC 15444] gi|114738823|gb|ABI76948.1| dTDP-4-dehydrorhamnose reductase [Hyphomonas neptunium ATCC 15444] Length = 296 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 114/282 (40%), Positives = 163/282 (57%), Gaps = 4/282 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LVIG++GQ+AQSL +M +DV + VGRPD DL P A +P +++N YT V Sbjct: 9 LVIGSSGQLAQSLRAMGREDV--VCVGRPDADLADPIKLADLVAKMTPRLVLNAGGYTKV 66 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE + AF++N +G +A+ S IP I+ISTD VFDG P P+N Sbjct: 67 DPAETQTSEAFALNRDGPATLARLCASADIPLIHISTDCVFDGRKEAPYTPEDLAEPINA 126 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE VA ++I+R +WV+S NF+ +ML++A++R EISVV DQ G PT Sbjct: 127 YGRSKLAGEEAVALSCRKHLIVRVSWVFSEHADNFVRTMLKIARQRDEISVVRDQIGYPT 186 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 +A +++IA +++ GI+H+ A G V A AE IF ES GGP ++V Sbjct: 187 YCPDLAAGLLEIAGQVLQPGFEDW-GIYHL-AGGSEVDRASMAEAIFAESRTIGGPAARV 244 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + T+ YPT A RP + LD K + + W+ G++ Sbjct: 245 LPVLTQDYPTPAERPLNARLDAGKANRVFGVALPNWQIGLQK 286 >gi|295400931|ref|ZP_06810906.1| dTDP-4-dehydrorhamnose reductase [Geobacillus thermoglucosidasius C56-YS93] gi|294976933|gb|EFG52536.1| dTDP-4-dehydrorhamnose reductase [Geobacillus thermoglucosidasius C56-YS93] Length = 282 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 123/288 (42%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q + E+ + ++D+ PD+IIN AA Sbjct: 1 MKVVVTGANGQLGQELVRQLQQTNFELYPFTKSELDITNESIVNEVITKIEPDIIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G + AA+ +G YISTDYVFDG S P E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRNLVVAAEKVGAKICYISTDYVFDGSSMIPYREYDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSKL GEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKLVGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIHVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR II + T GI+H T + G SW +FA IF ES Sbjct: 181 GSPTYTVDLARFIIDLVQ-------TDKFGIYHCT-NSGSCSWYEFATAIFEES----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T+Q P A RP YS LD + + W+E ++ L Sbjct: 229 NVKVNPITTEQLPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFL 276 >gi|253999153|ref|YP_003051216.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. SIP3-4] gi|253985832|gb|ACT50689.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. SIP3-4] Length = 301 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 165/295 (55%), Gaps = 14/295 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ +L M + + R ++L + PDVI+NPAAYT Sbjct: 5 RILLTGVHGQVGHALLPMLATWGTVTALDRAALNLSDAAAIRKTVRTLRPDVIVNPAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A++INAE +A+ A +G ++ STDYVFDG + P E TNPL Sbjct: 65 AVDKAETEPDLAYAINAEAPRILAEEAAELGARMVHYSTDYVFDGRASKPYRETDMTNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+ V ++ILRT+WVY +G NFL ++LRLA+ER + +V DQFG Sbjct: 125 GVYGASKLAGEKAVQQAGQQHLILRTSWVYGAYGKNFLHTILRLARERDSLGIVADQFGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE----SAERG 237 PTS+ IA A + L+++ L GI+H+T + G SW FA I AER Sbjct: 185 PTSSHDIASATL----TLLKSWQPELSGIYHLT-NSGYTSWYGFAVAILQAYEGLQAERD 239 Query: 238 GP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V I T +YPT A RPA S LD L +R+ W++ + ++ Sbjct: 240 LPPLRVSSEAVRAITTAEYPTPAARPANSRLDGDLLEQDWGLRLQDWRQALVQVM 294 >gi|330975552|gb|EGH75618.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 301 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/300 (39%), Positives = 169/300 (56%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGRCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEQQWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG+SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 AATGPLSVYGRSKLKGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H + + + +L GI+H+ A G SW FA+++ +A Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAA 239 Query: 235 ERGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YP A RP S L SKL +++ +W++G + +L I Sbjct: 240 LNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDEI 299 >gi|115279711|gb|ABI85327.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] gi|115279743|gb|ABI85359.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 177/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|29726006|gb|AAO88935.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 177/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ+G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQYGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSQLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|294788795|ref|ZP_06754036.1| dTDP-4-dehydrorhamnose reductase [Simonsiella muelleri ATCC 29453] gi|294483277|gb|EFG30963.1| dTDP-4-dehydrorhamnose reductase [Simonsiella muelleri ATCC 29453] Length = 302 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 169/288 (58%), Gaps = 7/288 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L + EI+ R +D+ F PDVIIN AAYT Sbjct: 14 KYLITGANGQVGSQLVAQLQGKAEILATDRNALDITDRASVLQIVNEFRPDVIINAAAYT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E +A +IN GA +A AA+ +G ++ISTDYVFDG P E P P Sbjct: 74 AVDKAESEANLAHAINCTGAENLAIAANEVGAIILHISTDYVFDGKGEKPYRETDPVAPQ 133 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE V + ++ILRTAWV++ G+NF+ +M+RL K+R + +V DQFG+ Sbjct: 134 SVYGKTKLAGELAVQAACARHIILRTAWVFNEHGNNFIKTMIRLGKQRDTLGIVGDQFGS 193 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG--G 238 PT A IA A+I I+ L+ N+ G++H + G P VSW +FA IF ++ ++ Sbjct: 194 PTYAGDIANALILISEQLMNNNQNF--GVYHFS--GSPYVSWFEFACEIFTQAQQQQILS 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +I T+ YPT A RPA+S LDC K+ I+ S W+ + ++ Sbjct: 250 QLPVLNKIATEDYPTPAFRPAHSRLDCGKIQAVFGIQPSDWQRALTDL 297 >gi|29725991|gb|AAO88923.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 177/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|56965450|ref|YP_177182.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16] gi|56911694|dbj|BAD66221.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16] Length = 281 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ L S + ++ + R D+D+ S F PD++++ AAY Sbjct: 4 RVLITGAGGQLGHDLVSQFSLNGYQVFGLTRQDLDITDQDMVKSVFEKVKPDLVVHAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + + AF +NA G +A A+ +YISTDYVF+G +R PI+EFSP P Sbjct: 64 TAVDQAESDVDDAFRVNAIGTRNVAVEANRYNAKVVYISTDYVFNGQAREPINEFSPVAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + IYG+SKLAGE + N + I+RT+WVY G+NF+ +ML+L +E+ EI VV DQ G Sbjct: 124 IGIYGQSKLAGENYIRDLCNQFFIVRTSWVYGSLGNNFVKTMLKLGQEKEEIGVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A++I++I T GI+H++ + G SW +FA+ IF E G Sbjct: 184 SPTYTVDLAKSIVEIGA-------TEKFGIYHVS-NSGSCSWYEFAKAIF----EISGID 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T+++P A RPAYS D L ++ W+E +R+ L N Sbjct: 232 VKVKALSTEEFPRPAKRPAYSVFDHMGLRLNGFNKVRNWREALRDFLEN 280 >gi|66044180|ref|YP_234021.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] gi|63254887|gb|AAY35983.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] Length = 301 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 121/301 (40%), Positives = 169/301 (56%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +AK A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAKEAAALGAWLIHYSTDYVFDGSGEQQWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 AATGPLSVYGGSKLMGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI + + + + +L GI+H+ A G SW FA+++ E A Sbjct: 181 ADQYGAPTGAELIADVTAQILYRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVL-EHA 238 Query: 235 ERGGPYSKVY-----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 R G KV I T+ YP A RP S L SKL +++ +W++G + +L Sbjct: 239 ARNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|253996730|ref|YP_003048794.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8] gi|253983409|gb|ACT48267.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8] Length = 319 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 170/295 (57%), Gaps = 18/295 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K L+ G NGQ+ +L E++ + R +DL P+ + PD+IINP Sbjct: 20 KILLTGVNGQVGHALQLALANQSGLFAELVCLDRSQLDLSNPQAIRDVVQAIQPDLIINP 79 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE EP++A++INA G +A+ A +G I+ STDYV+ G E Sbjct: 80 AAYTAVDKAESEPDLAYAINATAPGVLAEEAAKLGAKFIHFSTDYVYAGNKIGVYVEDDA 139 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T PL+IYGKSKLAGEE V + +I RT+WVY +G NFL ++LRLAKER ++ +V D Sbjct: 140 TAPLSIYGKSKLAGEEAVRAVGLPSLIFRTSWVYGAYGKNFLHTILRLAKEREQLRIVAD 199 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-- 235 Q G PTS+ IA+A++++ + D G++H+ + G +W FA I A+ Sbjct: 200 QIGAPTSSHSIAQAVVEV----LARWDGEHSGVYHLV-NAGRTTWHGFATAIVDAYAQLQ 254 Query: 236 --RGGPYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 R P K + I T YPT A RPA SCLDC+KL++ ++++ W++ + Sbjct: 255 PARDWPMLKAKVANIGPITTADYPTPAARPANSCLDCTKLSSDFSVQLPDWRDAL 309 >gi|1890604|emb|CAB01952.1| ExpA10 [Sinorhizobium meliloti] Length = 275 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 165/264 (62%), Gaps = 1/264 (0%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA Sbjct: 1 MEVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGA 60 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++ Sbjct: 61 VAEAAACLEVPIVHISTDYVFDGSKPRSYAEGDTPAPLSVYGASKLAGESAVAEATPRHL 120 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ILRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 121 ILRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSR 180 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 + G++H+ A G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 181 QDAAFGLYHL-AGSGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSL 239 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 +K T + W+ V + Sbjct: 240 SSAKFNATFGQAMPAWQGSVERTV 263 >gi|241761595|ref|ZP_04759682.1| dTDP-4-dehydrorhamnose reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373903|gb|EER63436.1| dTDP-4-dehydrorhamnose reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 297 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 161/287 (56%), Gaps = 3/287 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LVIG NGQ+A SLS + + + I GRP +D P +IIN AA+TAV Sbjct: 10 LVIGRNGQLATSLSKLGKESITCI--GRPILDFNYLDSILEIIKRHKPRIIINTAAWTAV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE + + A IN GA +A ++I IP I+ISTDYV+DG +P E P P + Sbjct: 68 DLAEKQKKAAMQINYLGAKELAHVCNNIQIPLIHISTDYVYDGKKGSPYIETDPIKPQTV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SK AGE V S N +ILRT+WVYS G NF+ ++ +K++ + VV DQ+G PT Sbjct: 128 YGRSKAAGELAVLSENPNSIILRTSWVYSSCGENFVCKIINASKKQSSLKVVADQYGNPT 187 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 ++ +A AII I + S +GI++++ G SW +FA+ I ES G K+ Sbjct: 188 NSDDLANAIIHIIPQIFYKSPKKCQGIYNVSGTGS-ASWYEFAKIILEESKNYGLLLPKL 246 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 IFT +PT A RP SCLDC K + IR+ W+ ++ + I Sbjct: 247 TPIFTSDWPTLAKRPKNSCLDCKKFKDIFGIRLPYWRSSIKKTISEI 293 >gi|307318654|ref|ZP_07598087.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] gi|306895681|gb|EFN26434.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] Length = 275 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 165/264 (62%), Gaps = 1/264 (0%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA Sbjct: 1 MEVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGA 60 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++ Sbjct: 61 VAEAAACLEVPIVHISTDYVFDGSKPGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHL 120 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ILRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 121 ILRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSR 180 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 + G++H+ A G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 181 QDAAFGLYHL-AGSGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSL 239 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 +K T + W+ V + Sbjct: 240 SSAKFNATFGQAMPAWQGSVERTV 263 >gi|28198139|ref|NP_778453.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Temecula1] gi|182680769|ref|YP_001828929.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M23] gi|28056199|gb|AAO28102.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Temecula1] gi|182630879|gb|ACB91655.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M23] gi|307579235|gb|ADN63204.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 302 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 164/303 (54%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGVGCVQADFGQPETLRALLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG Sbjct: 59 RPVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 119 SPYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATS 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE I Sbjct: 179 ECLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 235 FVQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVL 294 Query: 288 VNI 290 I Sbjct: 295 DEI 297 >gi|307303495|ref|ZP_07583249.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti BL225C] gi|306902886|gb|EFN33478.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti BL225C] Length = 275 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 117/264 (44%), Positives = 165/264 (62%), Gaps = 1/264 (0%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA Sbjct: 1 MEVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGA 60 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++ Sbjct: 61 VAEAAACLEVPIVHISTDYVFDGSKPGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHL 120 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ILRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 121 ILRTGWVYSPFGKNFVKTVLRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSR 180 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 + G++H+ A G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 181 QDAAFGLYHL-AGSGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSL 239 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 +K T + W+ V + Sbjct: 240 SSAKFNATFGQAMPAWQGSVERTV 263 >gi|150026506|ref|YP_001297332.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium psychrophilum JIP02/86] gi|149773047|emb|CAL44531.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium psychrophilum JIP02/86] Length = 284 Score = 209 bits (532), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 7/285 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G +GQ+ QS+ + + E I +D+ + + FF + D IN A Sbjct: 1 MVILVTGASGQLGQSIQYIASNYANCEFIFASSTALDITNKEAVSHFFNTNKIDFCINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E A +IN G +A + I+ISTD+VFDG S P E T Sbjct: 61 AYTAVDKAELETEKAEAINVAGPKNLAVLCKKHQVKLIHISTDFVFDGASNKPYLETDIT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL IYGK+KL GE+ V + T+ Y I+RT+WVYS FG+NF+ +MLRLA ER +S+V DQ Sbjct: 121 NPLGIYGKTKLDGEQAVINNTDEYFIIRTSWVYSQFGNNFMKTMLRLASERDSLSIVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT+A+ +A+AI+QI + ++ GI++ + + G SW DFA IF Sbjct: 181 IGSPTNAVDLAKAIMQIIAKTQHPTASTAYGIYNFSNE-GIASWYDFAVEIF----RINN 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I ++ +PT A RP YS LD SK+ NT I I TW+E + Sbjct: 236 VVIDVNPILSEAFPTPAKRPKYSLLDKSKIKNTFGIEIKTWQESL 280 >gi|29725986|gb|AAO88919.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A +++ + T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVDGNSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|29725996|gb|AAO88927.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 177/294 (60%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNKFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A +++ T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVDGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|21244307|ref|NP_643889.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas axonopodis pv. citri str. 306] gi|21109958|gb|AAM38425.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas axonopodis pv. citri str. 306] Length = 299 Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 122/299 (40%), Positives = 161/299 (53%), Gaps = 18/299 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII---RVGR-PD------IDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L + I+ R GR PD D P + Sbjct: 1 MTTLVLGANGQVGTELLRALAANGPILGSTRSGRLPDGAACEVADFDAPHRLSELLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE G IA+ +P ++ STDYVFDG Sbjct: 61 PSCVVNAAAYTAVDRAEQERDAAFRANAEAPGVIAQWCARADVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA AH L + + S G++H+TA G +W FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADI---TAHALRQPGEPS--GLWHLTA-AGQTTWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ +L Sbjct: 235 AQARARGLLARTPRVEAIGTADYPTPATRPAYSRLDTHSLQDTFGVRLPDWQDGLSQVL 293 >gi|170729451|ref|YP_001774884.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M12] gi|167964244|gb|ACA11254.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M12] Length = 302 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 163/303 (53%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGRGCVQADFDRPETLRPLLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG Sbjct: 59 RPVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 119 SPYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATS 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE I Sbjct: 179 ECLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 235 FAQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVL 294 Query: 288 VNI 290 I Sbjct: 295 DEI 297 >gi|254468335|ref|ZP_05081741.1| dTDP-4-dehydrorhamnose reductase [beta proteobacterium KB13] gi|207087145|gb|EDZ64428.1| dTDP-4-dehydrorhamnose reductase [beta proteobacterium KB13] Length = 283 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 115/287 (40%), Positives = 168/287 (58%), Gaps = 7/287 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ +L + + E+I + R D DL + PD+IINPAAY Sbjct: 1 MKILITGINGQVGHALMQE-LSEYELIGLTRQDCDLTNLDQIKQVIDNHQPDLIINPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AEDEPE+AF IN + +A+ A IP I+ STDYVFDG E PT+P Sbjct: 60 TKVDQAEDEPELAFKINRDVPKVMAEKARECHIPFIHFSTDYVFDGEKEGSYVEDDPTHP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SK AGEE + I RT+WVYS G+NF L+M +L++++ + +V DQ G Sbjct: 120 LGVYGESKCAGEEAIQEVGGLTYIFRTSWVYSNIGNNFFLTMQKLSQKQGDHKIVADQHG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS+ IA+ + I L +NS GI+H+ A+ G SW +FA+ IF ++ G Sbjct: 180 IPTSSQFIAKHLKSIIPQLDKNS----IGIYHLVAN-GKCSWYEFAKQIFTQT-NPGFNL 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K++ I + +Y TK RPA S L K+ NT N++++ W + + ++ Sbjct: 234 EKIHPISSHEYDTKVKRPANSVLSNVKITNTFNLKLNNWDKELEEVI 280 >gi|71276344|ref|ZP_00652621.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Dixon] gi|71162806|gb|EAO12531.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Dixon] Length = 302 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 127/303 (41%), Positives = 163/303 (53%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGRGCVQADFGQPETLRPLLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG Sbjct: 59 RPVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 119 SPYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATS 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE I Sbjct: 179 ECLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 235 FAQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVL 294 Query: 288 VNI 290 I Sbjct: 295 DEI 297 >gi|298368476|ref|ZP_06979794.1| dTDP-4-dehydrorhamnose reductase [Neisseria sp. oral taxon 014 str. F0314] gi|298282479|gb|EFI23966.1| dTDP-4-dehydrorhamnose reductase [Neisseria sp. oral taxon 014 str. F0314] Length = 287 Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 167/289 (57%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+AQ E+I +D+ + +F PD I+N AAY Sbjct: 1 MRILLTGSKGQLAQCFRDRLPDKWEVISTDSASLDITDATAVFNMVQNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E AF++NA +A AA + I+ISTDYVF+G + P E NP Sbjct: 61 TAVDKAEREYRKAFAVNASAVHNLAAAAYEAKVRFIHISTDYVFEGDGKNPYSEHDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYGKSKL+GE + +++RTAW++S +G NF+ +MLRLAKER +SVV DQ G Sbjct: 121 QSIYGKSKLSGEFLALAANPESIVVRTAWLFSEYGENFVKTMLRLAKERDTLSVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RGG 238 PT A +A+A+I I S RG++H D VSW +FA+ IF ++E +G Sbjct: 181 NPTYAGDLAQALIDIL-----KSAGPARGVYHFCGDKS-VSWYEFAQAIFQTASENIKGF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I ++QYPT A RPAYS LDC K+ ++ S W++ + +I+ Sbjct: 235 KVPELKPIPSEQYPTPAPRPAYSVLDCGKINRDFGVKTSDWQKALGSII 283 >gi|261822265|ref|YP_003260371.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium wasabiae WPP163] gi|261606278|gb|ACX88764.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium wasabiae WPP163] Length = 281 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 121/289 (41%), Positives = 168/289 (58%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + EI+ ++D+ F P+ I+N AAY Sbjct: 1 MKILLTGAKGQLGRCFQDRLPIGWEILATDAAELDITDLACVEQVVQDFQPNAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A AA+ G I++STDYVFDG + P +E S TNP Sbjct: 61 TAVDKAESEPELAERINVIGPMNLAIAANKQGTRLIHVSTDYVFDGNATEPYNEDSATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAGE+ VA N +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGKTKLAGEQAVAQTVPNSIIVRTAWVFSEYGNNFVKTMLRLAKERDTLSIVNDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A+AII + E GI+H D VSW +FAE IF +A++ Sbjct: 181 CPTYAGDLAQAIISLLEKNTEG------GIYHYCGD-REVSWYEFAESIFAIAADKSLLI 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A+RPA+S L C K+ I +S W++ ++ + Sbjct: 234 DIPSLKAISTTDYPTPAYRPAFSTLSCDKVKKL-GISLSGWEKALQKTI 281 >gi|163803298|ref|ZP_02197177.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. AND4] gi|159172935|gb|EDP57773.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. AND4] Length = 293 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 121/292 (41%), Positives = 171/292 (58%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ L+ D +E++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCNGQVGSCLTKQLASDNNIEVLALDRQHLDITNRDAVHAVVTEFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+ A S+G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVKLSYAINRDGPQYLAQTAQSMGAAILHISTDYVFEGNKNGEYAESDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVTKACDKHIILRTAWVFGENGNNFVKTMLRLGENRDALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+IQIA + + T G++H + G P VSW DFA+ IF + A Sbjct: 181 FGGPTYAGDIASALIQIAKRITQGK-TVEYGVYHYS--GLPHVSWFDFADTIF-DIAVGQ 236 Query: 238 GPYSKVYR---IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G + K R I T QYPT A RP+ S L KL +I S WK + NI Sbjct: 237 GIFEKKPRLTSIKTDQYPTPAKRPSNSRLSTHKLTQAFSIEASDWKAALSNI 288 >gi|127512334|ref|YP_001093531.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126637629|gb|ABO23272.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 288 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 166/289 (57%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L EI+ V ++D+ + + F PDVIIN AA+ Sbjct: 1 MKVLVTGCNGQVGHCLVEQLQGKAEILAVDAQELDITQQQAVNDVVNKFIPDVIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E ++ +N +G +A+AA SIG ++ISTDYVF+G +E TNP Sbjct: 61 TAVDRAETEQEQSYKVNCDGPKYLAQAAQSIGASILHISTDYVFEGNKDGLYNEEDVTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGE+ V ++ILRTAWV+ G+NF+ +MLRL +ER +S+V DQFG Sbjct: 121 QGVYGASKLAGEQAVIQACEKHIILRTAWVFGQHGNNFVKTMLRLGQERDSLSIVGDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG-- 237 PT A IA A+I IA ++ + G++H + G P V+W FA+ IF ++ E+ Sbjct: 181 GPTYAADIAVALIHIAQQ--AHAGKNAWGVYHFS--GMPHVNWYQFADAIFTKAVEQNIL 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T QYPT A RP S LDC K+ + I S W + + I Sbjct: 237 EKAPTLTSISTLQYPTPAKRPTNSKLDCHKIKSIFGILPSDWVKALTEI 285 >gi|153826343|ref|ZP_01979010.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2] gi|149739912|gb|EDM54099.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2] Length = 296 Score = 208 bits (529), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVEGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|118588018|ref|ZP_01545428.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614] gi|118439640|gb|EAV46271.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614] Length = 296 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 3/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G NGQ+ ++ + +++ + R +D+ A +PD+IIN AAY Sbjct: 3 RILLTGANGQLGYEVARKGREMGLDLAALDRSQLDITDRAAVADVVQQIAPDLIINTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + + AF++N +G +A+AA G I+ STDYVFDG E P Sbjct: 63 TAVDRAETDSQAAFAVNRDGPRNLAEAAQKHGSVLIHFSTDYVFDGSQPHAYVEQDEVGP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + +YG+SK AGE + + T ++ILRT+WVY + G+NF+ +MLRLA+ER I VV DQ G Sbjct: 123 IGVYGESKEAGEAAIRAVTERHLILRTSWVYGVHGANFVRTMLRLAQERAHIRVVNDQSG 182 Query: 181 TPTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A ++++A ++ G FH A G V+W FA+ IF + ER G Sbjct: 183 CPTYAADLAEVVLRLAERVLNGQLQQDGYGTFH-CAGQGQVTWHGFADKIFQLAGERFGK 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I ++P++A RPA S LDCSKLA H + + W+E + ++L ++ Sbjct: 242 KPELIAIPGSEFPSRARRPANSALDCSKLARVHGLALRQWQEALSDMLDHL 292 >gi|153214737|ref|ZP_01949582.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587] gi|124115173|gb|EAY33993.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587] Length = 296 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/296 (40%), Positives = 179/296 (60%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ P + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A +++ + T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVDGNSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +G +V I T++YPT A RPA S LD K+ + S W+ + N L++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAAL-NYLID 291 >gi|146293634|ref|YP_001184058.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] gi|145565324|gb|ABP76259.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] Length = 291 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 121/291 (41%), Positives = 169/291 (58%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G++GQ+ L Q DVE + V R +D+ + F PD IIN A Sbjct: 1 MKILVTGSHGQVGSCLVKQLSQMPDVEFLAVDREQLDITNSAAVSKLVNQFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +A++A+ +G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAQSANRVGATILHISTDYVFAGDKDGEYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGVYGHSKLAGELAVAAACPRHIILRTAWVFCETGNNFVKTMLRLAQNRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I +A + E + + GI+H G P V+W FA IF ++ E+G Sbjct: 181 FGGPTYAGDIANALIVMAKAVSEGNQSF--GIYHYA--GLPHVNWHQFAMEIFAKAKEQG 236 Query: 238 GPYSKVY--RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I + QYPT A RPA S LDC K+ ++ S W+ + N+ Sbjct: 237 VLNKEVLVNSITSDQYPTPAKRPANSKLDCRKIEQIFGVKPSDWQTALNNL 287 >gi|146283606|ref|YP_001173759.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|145571811|gb|ABP80917.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 306 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 167/291 (57%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + L + ++++ R +D+ KP+ A + P++IIN AA Sbjct: 1 MRILVCGAGGQVGRELVERASRFGLDVLAPARAQLDIAKPEQVADA-MRQRPELIINAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E A+++N +G +A+AA G+P +ISTDYVF G + P E T Sbjct: 60 YTHVDNAESHGEQAYAVNRDGPRHLAEAAKHAGVPLFHISTDYVFSGEATRPYTESDETG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGEE + S ++ILRT+WVY + G NF+ +MLRLA++R + VV DQ Sbjct: 120 PTGVYGASKLAGEEAIRSCLPAHLILRTSWVYGVHGHNFVKTMLRLARQRDALGVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-SWADFAEYIFWESAERG- 237 G PT A IA ++++A + ++ + G++H + G P SW DFA IF + G Sbjct: 180 GCPTQAGSIASVLLELARRYADGAELAW-GVYHYS--GAPACSWYDFAVEIFRQGEAAGL 236 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T QYPT A RPA+S LDCS+ + W+E + ++L Sbjct: 237 IARQPEVSPIMTAQYPTPARRPAWSVLDCSRFEAAFGLAPHRWQEDLADVL 287 >gi|327482001|gb|AEA85311.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 306 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 167/291 (57%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + L + ++++ R +D+ KP+ A + P++IIN AA Sbjct: 1 MRILVCGAGGQVGRELVERASRFGLDVLAPARAQLDIAKPEQVADA-MRQRPELIINAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E A+++N +G +A+AA G+P +ISTDYVF G + P E T Sbjct: 60 YTHVDNAESHGEQAYAVNRDGPRHLAEAAKHAGVPLFHISTDYVFSGEATRPYTESDETG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGEE + S ++ILRT+WVY + G NF+ +MLRLA++R + VV DQ Sbjct: 120 PTGVYGASKLAGEEAIRSCLPAHLILRTSWVYGVHGHNFVKTMLRLARQRDALGVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-SWADFAEYIFWESAERG- 237 G PT A IA ++++A + ++ + G++H + G P SW DFA IF + G Sbjct: 180 GCPTQAGSIASVLLELARRYADGAELAW-GVYHYS--GAPACSWYDFAVEIFRQGEAAGL 236 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T QYPT A RPA+S LDCS+ + W+E + ++L Sbjct: 237 IARQPEVSPIMTAQYPTPARRPAWSVLDCSRFEAAFGLAPHRWQEDLADVL 287 >gi|86147259|ref|ZP_01065574.1| probable dTDP-4-rhamnose reductase [Vibrio sp. MED222] gi|85834974|gb|EAQ53117.1| probable dTDP-4-rhamnose reductase [Vibrio sp. MED222] Length = 293 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 118/284 (41%), Positives = 170/284 (59%), Gaps = 8/284 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ L+ +++ ++ + R +D+ + + F P +IIN A Sbjct: 1 MRVLITGCHGQVGSCLTKQLANNENIAVLALDREHLDITSQEAVNAIVAEFEPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+AA S+G ++ISTDYVFDG E T Sbjct: 61 AHTAVDKAEEELDLSYAINRDGPKYLAQAAQSVGAAMLHISTDYVFDGDKVGEYAETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YGKSKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA +S+V DQ Sbjct: 121 NPQGVYGKSKLAGEIAVAQECKKHIILRTAWVFGENGNNFVKTMLRLANSYESLSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A++ IA I N +T GI+H + G P VSW+ FA+ IF E+ E+G Sbjct: 181 FGGPTYAGDIASALVTIA-KAICNGETDRFGIYHFS--GLPHVSWSQFAQAIFDEAVEQG 237 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 V I T++YPT A RP S L+ + + NT I S W Sbjct: 238 VLKCSPAVNSITTEEYPTLAKRPENSKLNTTLIRNTFGINASDW 281 >gi|148549140|ref|YP_001269242.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] gi|148513198|gb|ABQ80058.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] Length = 301 Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G +GQ+ L V EI+ +GR + DL + +P Sbjct: 1 MKVLLLGKDGQVGWELQRALVVMGEIVALGRNPVSTSYGTLSGDLSDLDGLRQTIRAVAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I+N AAYTAVDKAE E E+A +NA +G IA+ A + ++ STDYVFDG +P Sbjct: 61 DLIVNAAAYTAVDKAETEQELARKVNALASGVIAEEAKRLDALFVHYSTDYVFDGAGTSP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + NY+I RT+WVY+ G+NF +MLRLAKER+ Sbjct: 121 WKESDSVSPVNYYGATKLEGEQLIVASGCNYLIFRTSWVYAAKGNNFAKTMLRLAKERQT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PTSA +A + + N SL GI+H+ A G SW +A Y+ Sbjct: 181 LNVIADQIGVPTSAELLADVAVHAVQKTLNNP--SLCGIYHL-APAGETSWHAYATYVIA 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A+RP S LD +KL + +++ WK GV +L+ Sbjct: 238 SARAHGEPLAVETINPIATTEYPTPANRPLNSRLDTTKLRDAFALQLPDWKVGVTRMLME 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|325276926|ref|ZP_08142613.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] gi|324097941|gb|EGB96100.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] Length = 300 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 165/301 (54%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R DL + A+ +PD+I+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGAEGLCGDLSQADGLAATVRQLAPDIIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + +A INA+ +A+ A ++G ++ STDYVFDG P +E Sbjct: 61 NAAAYTAVDKAESDQALAAMINAQAPAVLAREAAALGAWLVHYSTDYVFDGSGDQPWEET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG++KL GE + + ++LRT+WVY+ G NF +MLRLA ER +SVV Sbjct: 121 AATGPLSVYGRTKLDGERGILASGAKALVLRTSWVYAARGHNFAKTMLRLAAEREGLSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG PT A IA I + D L G++H+ A G SW FA+++ A Sbjct: 181 ADQFGAPTGAELIADVTAHILRQIFNGQDNRHLAGVYHLAA-AGETSWHGFAQFVL-AHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +R G KV I T+ YP A RP S L +KL T N ++ W++GV+ +L Sbjct: 239 QRNGVALKVTADKVAPISTEAYPVPAPRPRNSRLALAKLEKTFNFKMPLWEQGVQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|325928552|ref|ZP_08189740.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] gi|325541091|gb|EGD12645.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] Length = 299 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 121/299 (40%), Positives = 161/299 (53%), Gaps = 18/299 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII---RVGR-PD------IDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L + I+ R GR PD D P+ + Sbjct: 1 MTTLVLGANGQVGTELLRALAANGPILSSTRSGRLPDGAACEVADFDAPQRLSELLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE IA+ +P ++ STDYVFDG Sbjct: 61 PSCVVNAAAYTAVDRAEQERDAAFRANAEAPSVIAQWCARASVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA AH L + + S G++H+TA G +W FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADI---TAHALRQPGEPS--GLWHLTA-AGQTTWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ +L Sbjct: 235 AQARARGLLAHAPRVEAISTADYPTPATRPAYSRLDIHSLQDTFGVRLPDWQDGLSQVL 293 >gi|146343779|ref|YP_001208827.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS278] gi|146196585|emb|CAL80612.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS278] Length = 302 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ +L + E+I R DL +P A +PD+I+NPA Sbjct: 1 MRILITGTSGQVGGALRRLLPAGGTDELICPPRAAFDLTQPASLAGALDRLAPDLILNPA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDE E+A ++N + G IA+ A +P +++STDYVFDG P E Sbjct: 61 AYTAVDRAEDEAELAMTVNGQAPGVIAQWAAPRRVPLLHVSTDYVFDGAGEHPWRESDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL+ YG+SKLAGE+ V S ++I+RTAWV++ G+NF+ +++RLA+ER + VV DQ Sbjct: 121 GPLSAYGRSKLAGEDAVRSAGGPHLIVRTAWVFASAGANFMRTIVRLAREREALRVVADQ 180 Query: 179 FGTPTSALQIAR---AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 GTPTSA IA AI+ + + G+ H+T + G SW FA I + Sbjct: 181 KGTPTSARTIAEVIAAILAQGAGDLPGAFARAEGLVHLT-NSGATSWHGFASAIVDGLRQ 239 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 R P V I T +PTKA RPA S LD S+L + + +W++ + Sbjct: 240 RNVPVKARAVEAITTADFPTKARRPANSQLDLSRLRGAYGLVPPSWQQAL 289 >gi|78186306|ref|YP_374349.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273] gi|78166208|gb|ABB23306.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273] Length = 288 Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 166/292 (56%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G GQ+ L ++ + + RPD+D+ F F PDV++N A Sbjct: 1 MNILVAGGRGQLGSELQALRKGAGAHRFLFLDRPDLDITDSGSVRGAFDRFQPDVVVNAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE++ E AF +N +GAG +A + G I++STDYVFDG + P E Sbjct: 61 AYTAVDRAEEDREAAFLVNRDGAGVLAGCSRDAGAFFIHVSTDYVFDGTASRPYREEDMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SK GE VAS ++ I+RT+W+YS +G NF+ +MLRL +ER + VV DQ Sbjct: 121 CPEGVYGRSKFEGERLVASVDPSHAIIRTSWLYSAYGQNFVKTMLRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ IA L + RG++H + + G SW DFA + E G Sbjct: 181 TGTPTHAADLASAVLHIA--LRHDPAFHYRGVWHYSNE-GVASWYDFAHAVM----EFAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I ++++P A RPAYS LD S + ++RI W++ ++ +L I Sbjct: 234 LPCRVEPITSREFPQVAVRPAYSVLDKSAVKRDWDLRIPYWQDSLKTLLTTI 285 >gi|16329215|ref|NP_439943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803] gi|1651695|dbj|BAA16623.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803] Length = 280 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 114/260 (43%), Positives = 153/260 (58%), Gaps = 11/260 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R DL +P +F+PD+I+N AAYTAVD+AE EPE+A+++NA AIAK A Sbjct: 20 RASFDLAQPDVLGEKIRAFAPDIIVNSAAYTAVDRAETEPELAYAVNALAPQAIAKVAKE 79 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 IG ++ISTDYVFDG +P E TNPL +YG+SK GE +A N++I+RTAWV Sbjct: 80 IGAYVVHISTDYVFDGSQSSPYRETDATNPLGVYGQSKFQGEIAIADSGCNFLIVRTAWV 139 Query: 151 YSIFGS-NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 Y + GS NF+ +M+RL KER+++ VV DQ G PT A +A AI + ++ +G Sbjct: 140 YGVHGSGNFVKTMVRLGKERQKVRVVADQIGGPTWAKDLAEAIAAL-------TEQRAQG 192 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSK 267 I+H + + G SW DFA IF E G P +V I T YPT A RPAYS L K Sbjct: 193 IYHYS-NSGVASWYDFAVAIFEEVENLGIPLKVRQVVPIATAAYPTPARRPAYSVLSHQK 251 Query: 268 LANTHNIRISTWKEGVRNIL 287 + T W+ +R +L Sbjct: 252 IVETLGSAPPHWRASLRAML 271 >gi|254523254|ref|ZP_05135309.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14] gi|219720845|gb|EED39370.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14] Length = 297 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 120/303 (39%), Positives = 161/303 (53%), Gaps = 20/303 (6%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G NGQ+ Q SL+ + V V R G+ PD D +P + Sbjct: 1 MTVLVFGGNGQVGQELLRSLAPLGVV-VATTRSGQLPDGSPCEVADFAQPDSLTALLDRL 59 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P V++N AAYTAVD+AE E E AF+ N + G IA+ + +P ++ STDYVFDG Sbjct: 60 QPTVVVNAAAYTAVDRAEQEVEAAFAANVQAPGVIARWCAAHDVPLVHYSTDYVFDGQGS 119 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P E PT PL +YG SK GE+ V ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 120 APYREDEPTAPLGVYGTSKRDGEDAVREAGGRHLIFRTAWVYASHGANFLRTMLRVGAER 179 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ GTPT A IA ++ + L G +H+TA G SW FAE I Sbjct: 180 DALRVVADQIGTPTPAALIADVTVKALQH-----PGQLSGTWHLTAS-GQTSWHGFAEAI 233 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F E+ G V I + +YPT A RPA+S LD KL I + W++G++ ++ Sbjct: 234 FAEALASGVLAKVPTVEAIASSEYPTPAKRPAWSVLDNRKLQRDFGIVLPVWQDGLKRVM 293 Query: 288 VNI 290 I Sbjct: 294 AEI 296 >gi|91782042|ref|YP_557248.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] gi|91685996|gb|ABE29196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] Length = 305 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 159/293 (54%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G+ GQ+ L ++ + R DL P S PDVI+NPAAYTAV Sbjct: 12 LVTGSRGQVGFELRRSLASLGNVVALDRSVCDLRSPDSIRSVVREVQPDVIVNPAAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE++ E+A++IN AG +A+ A S+G ++ STDYVFDG P E NP ++ Sbjct: 72 DAAENDAELAYAINGVAAGVLAEEAKSLGGLLVHYSTDYVFDGRKDGPYVETDVVNPQSV 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGE+ +A ++LRT WV GSNF +MLRL +ER + V+ DQ+G PT Sbjct: 132 YGKSKLAGEQAIAERGATAIVLRTCWVAGAHGSNFAKTMLRLGRERDSLRVIADQYGAPT 191 Query: 184 SALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 +A IA QI H L + G++H+ A G SW +A + +A RG Sbjct: 192 TAALIADVTAQIVARHWLHGDRAAFASGVYHLAA-AGQTSWHGYATEVLQFAAARGVELK 250 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T YP A RPA S LD KL T I + W++GV ++L I Sbjct: 251 VDLARIEPIATADYPLPAPRPANSRLDTHKLRQTFGINLPDWRDGVHHLLEQI 303 >gi|326799491|ref|YP_004317310.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] gi|326550255|gb|ADZ78640.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] Length = 287 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 110/286 (38%), Positives = 167/286 (58%), Gaps = 9/286 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +V+G GQ+ Q L S+C +D ++ + + D+ +F+ ++P IIN AAYT Sbjct: 3 KIIVLGGQGQLGQCLQSVC-EDKAMVFLSSKEADISNEAQLEQWFIQYNPSHIINCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAEDE E A IN G +A+ I+ISTD+VF+G ++E S NP Sbjct: 62 AVDKAEDEKEEASKINTIAPGILARLCKRFDAILIHISTDFVFEGNQTGLLEETSIANPT 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KL GE + N ++I+RT+W+YS + +NF+ +MLRLA++R E+ VV DQ GT Sbjct: 122 GVYGQTKLDGETTIQQIWNKHIIIRTSWLYSEYANNFVKTMLRLAQDREELKVVADQVGT 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A + +I N I + G++H + + G SW DFA +F E Sbjct: 182 PTYARDLAEVLCKIIDNNITEDE---YGLYHYSNE-GVASWYDFAYAVF----ELSNTNI 233 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ I T +PTKA RPAYS +D SK+ N+ I W++ ++N L Sbjct: 234 RLFPIKTADFPTKAKRPAYSVMDKSKIKKQFNLVIPNWRDSLKNCL 279 >gi|325954730|ref|YP_004238390.1| dTDP-4-dehydrorhamnose reductase [Weeksella virosa DSM 16922] gi|323437348|gb|ADX67812.1| dTDP-4-dehydrorhamnose reductase [Weeksella virosa DSM 16922] Length = 284 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 173/285 (60%), Gaps = 12/285 (4%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+AQ++ S+ + ++ I ++D+ + F + +IN AA Sbjct: 3 KILVTGANGQLAQAIESIEKSTKKIQFIFKTANELDITNRTNLLHHFDKNIYNGVINTAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE E + A+++NA G +A+ IP +++STDYVF G P E P + Sbjct: 63 YTAVDLAESEEKKAYAVNALGVENLARVTKRQNIPLLHLSTDYVFSGNDNHPQKEDDPCD 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P NIYGK+KLAGE+ +I+RTAW+YS FG+NF+ +MLRL ++++EI+V+ DQ Sbjct: 123 PQNIYGKTKLAGEQLALQTNPKTIIIRTAWLYSRFGNNFVKTMLRLFEQKKEINVINDQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A+ +A+A++QI IE SD G+FH + + G SW DFA+ I + Sbjct: 183 GSPTNAIDLAKALVQI----IE-SDVPQYGVFHYSNE-GECSWYDFAQAI----KKYTNS 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +++ I TK YPT A RPA+S LD +K+ + ++I W++ +R Sbjct: 233 SIEIHPIATKDYPTAAKRPAFSLLDKTKIKQVYGLKIPKWEDSLR 277 >gi|121533498|ref|ZP_01665326.1| dTDP-4-dehydrorhamnose reductase [Thermosinus carboxydivorans Nor1] gi|121308057|gb|EAX48971.1| dTDP-4-dehydrorhamnose reductase [Thermosinus carboxydivorans Nor1] Length = 280 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 167/288 (57%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + E++ P++D+ K ++ PD++IN AAYT Sbjct: 3 KILVTGANGQLGRALQRQFCEKYELVLCDLPELDITNFKACRDAVRTYGPDIVINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V++AEDEP+ A+++NA GA +A + I+ISTDYVFDG TP E+ NPL Sbjct: 63 NVERAEDEPDAAYAVNAIGAHNLALVCREANVKLIHISTDYVFDGARGTPYSEYDAPNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKL GE+ + Y I+RTAW+Y G NF+ +MLRLA ER EI+VV DQ+GT Sbjct: 123 SVYGKSKLLGEQLIRDTGGWYFIVRTAWLYGD-GHNFVRTMLRLAGERPEIAVVADQYGT 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A + QI H T GI+H T + G +W +FA IF E A++ Sbjct: 182 PTYTVDLAALLEQIMH-------TEYYGIYHAT-NAGNCTWYEFACKIF-EYADKK---V 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I T +YPTKA RP YS LD L + W+E +++ + N Sbjct: 230 AVRPITTDEYPTKAKRPRYSVLDNHMLRLRGFDIMRPWEEALKDYIAN 277 >gi|239813762|ref|YP_002942672.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110] gi|239800339|gb|ACS17406.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110] Length = 296 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E++ + + D +P+ A L PDVI+N Sbjct: 1 MKLLLLGKGGQVGWELQRSLAPLGELVALDFDSTDFNADFSRPEQLAETVLKVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA G +A+AA IG ++ STDYVFDG TP E Sbjct: 61 AAAHTAVDKAESEPEFARKLNATSPGVVAEAAQQIGALMVHYSTDYVFDGSGSTPWKEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YG++KL GE+ VA + ++I RT+WVY+ G NF +MLR+AKER ++V+ Sbjct: 121 ATGPLSVYGRTKLEGEQLVARHCAKHLIFRTSWVYAARGGNFAKTMLRIAKERDRLTVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ D + G++H A GG +W +A ++ ++ Sbjct: 181 DQFGAPTGAELLADVTAHAIRATLQ--DPAKAGLYHAVA-GGETTWHSYARFVIEQAKAA 237 Query: 237 G-----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G GP + V + T +PT A RPA S LD KL T + + W++GV +L Sbjct: 238 GVELKAGPEA-VDPVPTSAFPTPATRPANSRLDTRKLQATFGLVLPHWQQGVARML 292 >gi|261210464|ref|ZP_05924758.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. RC341] gi|260840522|gb|EEX67088.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. RC341] Length = 296 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 173/292 (59%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L +++VE + V R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLRTMKEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA IG ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKIGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACTRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT + IA A++ +A ++E T+ G++H + G P VSW +FA IF ++ ++G Sbjct: 182 HGGPTYSGDIANALLTMAKAIVEWKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARDQG 238 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 239 ILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|229512767|ref|ZP_04402235.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21] gi|229350277|gb|EEO15229.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21] Length = 296 Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 117/294 (39%), Positives = 176/294 (59%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G+ GQ+ Q LS+M ++VE + V R +D+ + F P++IIN Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTM--KEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTAPQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQ G PT A IA A++ +A +++ T+ G++H + G P VSW +FA IF ++ + Sbjct: 180 DQCGGPTYAGDIANALLMMAKAIVDGKSTAF-GVYHFS--GLPHVSWHEFACTIFDKARD 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 237 QGILNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQATLNHLI 290 >gi|77164294|ref|YP_342819.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707] gi|254434601|ref|ZP_05048109.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27] gi|76882608|gb|ABA57289.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707] gi|207090934|gb|EDZ68205.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27] Length = 295 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 156/284 (54%), Gaps = 8/284 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG GQ+ L E+ GR +DL + P +I+N AAYT Sbjct: 7 RILLIGATGQVGWELQRTLAPLGEVFAPGRERLDLAQLDSIRPCLAETQPALIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+EPE A +IN + G +A+ A G I+ STDYVFDG P E PL Sbjct: 67 AVDKAEEEPEQALAINGKAPGVLAETARQQGAAFIHYSTDYVFDGKKAAPYRESDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KL GE+ + + Y+ILRT+WVY + G NFLL+M RLA+ER + VV DQ+G Sbjct: 127 NVYGQTKLTGEQAIVAVGGAYLILRTSWVYGLRGHNFLLTMQRLAREREVLRVVDDQWGA 186 Query: 182 PTSALQIARAIIQI-----AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 PT + IA QI H +N GI+H++ G +W FA+ I A+ Sbjct: 187 PTWSRLIAEGTAQIIAQSWGHR--QNYIPLQTGIYHLSC-GEKTTWHGFAQTILTRLAQG 243 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +K+ I YPT A RPA+SCLD + +T I++ +W+ Sbjct: 244 AGSVAKLKAISAADYPTAARRPAFSCLDNTLARDTFGIQLPSWR 287 >gi|148976930|ref|ZP_01813585.1| dTDP-4-dehydrorhamnose reductase [Vibrionales bacterium SWAT-3] gi|145963804|gb|EDK29064.1| dTDP-4-dehydrorhamnose reductase [Vibrionales bacterium SWAT-3] Length = 294 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 172/291 (59%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ L+ QD I+ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCHGQVGTCLTEQLNQDENTTILALDREHLDITNQDSVNAVVSEFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E E++++IN +G +A+AA +IG ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVELSYAINRDGPKYLAQAAQTIGAAILHISTDYVFEGNKVGDYIETDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVVQSCDKHIILRTAWVFGESGNNFVKTMLRLGQTRDALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA +IQIA + + S+ G++H + G P VSW DFA+ IF + ++ Sbjct: 181 FGGPTYAGDIANTLIQIAKRITQGSEIEY-GVYHYS--GLPHVSWFDFADTIFDVAVQQK 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 SK + I T+QYPT A RP+ S L K+ +I S WK + NI Sbjct: 238 LLDSKPTLTSITTEQYPTPAKRPSNSRLSNEKVMANFSIEASDWKVALNNI 288 >gi|158333988|ref|YP_001515160.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017] gi|158304229|gb|ABW25846.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017] Length = 304 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 114/295 (38%), Positives = 163/295 (55%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ Q L E+I VG+ +DL P+ L PD+I+N AAYT Sbjct: 5 RILLLGAQGQLGQELQKTLPTMGELIAVGKETVDLAVPEQLHEAILPVQPDIIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E ++A ++N + +A+ A ++G I+ISTDYVFDG P E +P Sbjct: 65 AVDRAESEVKLAHTVNQKAPTVLAELAQTLGALLIHISTDYVFDGTQSHPYTESDAPHPQ 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 ++YG SK GEE + + ++ILRTAWVY G NF+ +MLRL +ER ++ VV DQ G Sbjct: 125 SVYGHSKWQGEEGIRQTWDQHIILRTAWVYGTQGKGNFVKTMLRLGRERSDVRVVDDQVG 184 Query: 181 TPTSALQIARAIIQIAHNLIEN---SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 TPT A +I AI + H+ + + L G +H T + G SW DFA IF E+ G Sbjct: 185 TPTWAKEIGDAIASLIHHWSTSDPVTQAELYGTYHFT-NRGVASWYDFAVAIFAEAQALG 243 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +V I T +YP A RPAYS L K+ W++ +R +L + Sbjct: 244 VPLQIERVIPITTPEYPLPAPRPAYSVLSNCKITPILGQPAPHWRQSLRQMLQEL 298 >gi|325915781|ref|ZP_08178083.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas vesicatoria ATCC 35937] gi|325538045|gb|EGD09739.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas vesicatoria ATCC 35937] Length = 299 Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 121/299 (40%), Positives = 161/299 (53%), Gaps = 18/299 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII---RVGR-PD------IDLLKPKDFASFFLSFS 50 M LV+G +GQ+ L D I+ R GR PD D P+ + + Sbjct: 1 MTTLVLGASGQVGTELLRALAGDGPILASTRSGRLPDGATCEVADFDAPQSLVALLDRLA 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE IA+ +P ++ STDYVF+G Sbjct: 61 PTRVVNAAAYTAVDRAEQERDAAFRANAEAPAVIAQWCARADVPMVHYSTDYVFNGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDTTAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA AH L + + S G++H+TA GG SW FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADI---TAHALRQPGEPS--GLWHLTA-GGQTSWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ RG V I T YPT A RPAYS LD L +T + + W++G+ +L Sbjct: 235 AQAHARGMLARVPHVEAISTADYPTPAMRPAYSRLDTHSLQDTFGVHLPAWQDGLSRVL 293 >gi|293407677|gb|ADE44331.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100407|gb|ADQ27803.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100441|gb|ADQ27835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100471|gb|ADQ27857.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] Length = 325 Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 118/290 (40%), Positives = 158/290 (54%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ LV G NGQ+ L +++ GR DL +P+ A S PDVI+N AAY Sbjct: 27 VRILVTGQNGQVGWELRRALAPLGDVVACGRETADLSRPETLAPLVASVKPDVIVNAAAY 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE++ +A +NAE G +A+AA ++ STDYVFDG +RTP E +PT+P Sbjct: 87 TAVDLAEEQEALAHRVNAESVGVLAQAAREHDALLVHYSTDYVFDGTARTPYVETAPTSP 146 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG++KLAGE + + + +++ LRT WVY G NFL +MLRL+ ER + VV DQ G Sbjct: 147 VNAYGRTKLAGERAIEAVSGDWLTLRTTWVYGARGRNFLRTMLRLSHERDALRVVADQIG 206 Query: 181 TPTSALQIARAIIQ-IAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA IA +AH E + T G+FHMTA G SW FA I A R Sbjct: 207 APTSARMIADLTAHVVAHAQRERRAGTFESGLFHMTA-AGETSWHGFASAII--DAARAV 263 Query: 239 -----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I + YPT A RPA S LD K + W++ + Sbjct: 264 RAEAIKTKTVEPISSDAYPTPARRPANSILDNGKFDRRFMLNRLDWRQAL 313 >gi|29726030|gb|AAO88955.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 291 Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 124/292 (42%), Positives = 169/292 (57%), Gaps = 11/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L + ++E + V R +D+ F PD IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKQLTELSEIECLAVDRDQLDITDRDAVNKLVNEFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN G +++AA+S+G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRYGPEYLSQAANSVGASILHISTDYVFAGDKEGAYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKLAGE+ VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGVYGHSKLAGEQAVAAACPRHIILRTAWVFCETGNNFVKTMLRLAQSRDELRVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I ++ L +S GI+H G P VSW FA IF + A+ Sbjct: 181 FGGPTYAGDIANALIVMSVAL--HSGNGHYGIYHFA--GKPHVSWFQFACQIF-KQAKAQ 235 Query: 238 GPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +SK V I + QYPT A RPA S LDC K+ T I S W+ ++N+ Sbjct: 236 KLFSKDIQVNAITSDQYPTPAKRPANSKLDCHKIEQTFCITPSDWQAALKNL 287 >gi|75674745|ref|YP_317166.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] gi|74419615|gb|ABA03814.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 119/294 (40%), Positives = 167/294 (56%), Gaps = 10/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G++GQ+ +L + + +I R DL P+ A F PD+IINPAAY Sbjct: 1 MRILLTGSSGQVGGALRPLLKEGGMVIAPSRSAFDLSNPETLAGALDRFKPDLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE E+AF +NA+ AIA+ + +P I+ STDYVFDG P E SPT P Sbjct: 61 TAVDRAEDERELAFLVNAKAPAAIAEWSARHRVPLIHFSTDYVFDGSGDKPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAG+ + + ++I RT+WVY+ G+NFL ++ RLA ER+E+ +V DQ G Sbjct: 121 LSVYGASKLAGDLAIEAAGGPHLIARTSWVYAASGANFLRTIARLAGERKELRIVADQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL-----RGIFHMTADGGPVSWADFAEYIFWESAE 235 PT+A IA A+ +I L SD S G+ ++ A G SW FA I Sbjct: 181 APTTANTIADAVSRIV--LSNASDLSALFARSGGVVNL-ACAGETSWHGFATAIVGGLKS 237 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RG S + I T +PT+A RP S LD S+L + TW++ + L Sbjct: 238 RGAGLSVETIIPIATADFPTRARRPGNSRLDLSQLRERFGLTPPTWQDALSTEL 291 >gi|312797096|ref|YP_004030018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] gi|303399366|emb|CBK52866.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] gi|312168871|emb|CBW75874.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] Length = 312 Score = 204 bits (520), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 115/286 (40%), Positives = 156/286 (54%), Gaps = 8/286 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQI L +++ V R DL +P + + P VI+NPAAYTAV Sbjct: 15 LVTGVTGQIGSELVRTMQGLGKVVAVDRATFDLTEPNQMRAVIRAIKPTVIVNPAAYTAV 74 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D A+ P++A +NA+ G +A+ A +G I+ STDYVF+G +P E +P N+ Sbjct: 75 DAAQSNPDLAMQVNAKAPGVLAEEARRVGAAMIHYSTDYVFNGEKDSPYVEEDEADPKNV 134 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGE +AS +++ILRT+WVY + G NFLL+MLRL ER EI VV DQFG PT Sbjct: 135 YGFSKLAGERAIASAGAHHLILRTSWVYGMRGRNFLLTMLRLGTERDEIKVVADQFGAPT 194 Query: 184 SALQIARAIIQIAHNLIENSDT-----SLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 + IA I + DT G++H+TA G SW FA+ IF A Sbjct: 195 WSNTIATLTAHIVSQALAAHDTRQWWQERSGLYHLTA-AGSTSWHGFAKAIFDAIALERV 253 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P V I + +PT+A RPA SCL KL ++ W + ++ Sbjct: 254 P--TVMPIPSSDFPTQAERPANSCLSNGKLERVFGLQSPQWDQALK 297 >gi|148556921|ref|YP_001264503.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas wittichii RW1] gi|148502111|gb|ABQ70365.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas wittichii RW1] Length = 296 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 119/285 (41%), Positives = 160/285 (56%), Gaps = 7/285 (2%) Query: 4 LVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ L+ D+ I R ++D+ P A++ L D I+N AAYTA Sbjct: 6 LVTGGQGQVGLELARQDWPVDMSIYYPTRDELDIASPDSIAAYLLGRRFDAIVNCAAYTA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E ++AF +N E G +A + GIP +++STDYVFDG E P PL Sbjct: 66 VDKAEEERDLAFRVNGEAPGLLA----ATGIPLVHVSTDYVFDGSGDGYYREDDPVAPLG 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE V + V+LRTAWV S SNFL +MLR+A + VV DQ G P Sbjct: 122 VYGASKLAGERAVLAGGARAVVLRTAWVLSAHRSNFLRTMLRVAATNPTLRVVDDQRGCP 181 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA + IA L+E+ + G++H + G SW + A IF SA GGP ++ Sbjct: 182 TGAADIAATLRTIALRLVEDP-AAPTGVYHFV-NAGEASWCELAREIFALSAAAGGPSAE 239 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T YPT A RPA S L +K+ + +R W+E VR+I+ Sbjct: 240 VEAITTADYPTPAKRPANSRLSTAKIIADYAVRPRDWREAVRDIV 284 >gi|114332357|ref|YP_748579.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas eutropha C91] gi|114309371|gb|ABI60614.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas eutropha C91] Length = 295 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 170/296 (57%), Gaps = 13/296 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINPAA 59 ++ G NGQ+ L ++I + R D+ DL + PDVI+N AA Sbjct: 1 MLFGKNGQVGWELQRSLAPLGKLIALDRRDLHYCGDLTNLAGMTHTLQAIRPDVIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE+EPE+AF IN E +A+ A+ +G I+ STDYVFDG P E PT Sbjct: 61 YTAVDQAENEPELAFRINTEAPELLAQLAEQMGAWLIHYSTDYVFDGSGERPWLETDPTL 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+NIYG+SKL GEE + ++ILRT+WVY+ G NF+ ++LRLA+E+ +++++ DQ Sbjct: 121 PVNIYGQSKLRGEESIRKSNCKHLILRTSWVYAARGKNFIRTILRLAQEKEQLTIIDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PT A +A Q L+ + + S GI+H+TA+ G VSW ++A+++ + E Sbjct: 181 GAPTGAELLADVTAQAIPQLLRHPEKS--GIYHVTAN-GEVSWCNYAQFLLNFACEHNLL 237 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S V I +K + T A RP S L+ KL NT N+ + W+ GV +L I Sbjct: 238 VKVRP-SAVTPIHSKAFVTSAKRPLNSRLNTDKLRNTFNLYLPHWQTGVTRMLSEI 292 >gi|312888931|ref|ZP_07748491.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM 18603] gi|311298449|gb|EFQ75558.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 110/291 (37%), Positives = 173/291 (59%), Gaps = 11/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G +GQ+ QSL + ++ E + + ++L F +++P+ IN AA Sbjct: 3 RIIVLGASGQLGQSLKFVTGENATGEFFFLAEEESNILDVNALTKAFATYNPNYCINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + + A +N +G IAK I++STD+VFDG S P+ E N Sbjct: 63 YTAVDKAEGDLDTARKVNRDGVENIAKLCKEFDTTLIHVSTDFVFDGNSPYPLSEMDTPN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG +KL GE ++ Y +NY ILRT+W+YS FG+NF+ +ML+LAKE+ E++++ DQ Sbjct: 123 PINAYGITKLEGEVVISEYIDNYYILRTSWLYSEFGANFVKTMLKLAKEKSELNIISDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A+ +A+AI+ I I + + + GI+H + + G SW DFA+ IF + G Sbjct: 183 GTPTYAIDLAQAIVAI----INSDNKAAYGIYHYSNE-GVASWYDFAKAIF----DIAGI 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V+ I T QYPT A RP +S +D K+ +T + I W+ ++ + + Sbjct: 234 AISVFPIRTSQYPTPAKRPVFSVMDKGKIKDTFKLDIPYWRYSLQGCIAKL 284 >gi|227538985|ref|ZP_03969034.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] gi|227241188|gb|EEI91203.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] Length = 287 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/286 (40%), Positives = 162/286 (56%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ ++ G NGQ+ L + D E + R + L + + PDVII+ A Sbjct: 1 MRIVITGANGQLGSELKDILRNDTEKEYHFLDRKHLPLDQTLIIQDLLAQYQPDVIIHAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE E E+A IN IA+ G I ISTDYVFDG S P+ E +P Sbjct: 61 AYTAVDRAESEQELADQINHLATSEIAQYCRIHGTKLIAISTDYVFDGNSNIPLKEDAPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P+NIYG +KL GE + + + +I+RT+WVYS++G+NF+ +M+RL ER EISV+ DQ Sbjct: 121 DPINIYGLTKLKGEHAIQKWLPDGIIIRTSWVYSVYGNNFVKTMVRLMSEREEISVINDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A AI+ I SD + GI+H + + G +SW DFA I E G Sbjct: 181 IGSPTYAHDLALAIVDII-----ESDKWIGGIYHYSNE-GEISWYDFAVAI----REIKG 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 K+ I T QYPT A RP YS LD SK+ + + WK+ ++ Sbjct: 231 LDCKINPIPTTQYPTPAKRPRYSLLDKSKIKHAFKVDTPNWKDSLK 276 >gi|300313656|ref|YP_003777748.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum seropedicae SmR1] gi|300076441|gb|ADJ65840.1| dTDP-4-dehydrorhamnose reductase protein [Herbaspirillum seropedicae SmR1] Length = 312 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 11/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G +GQ+ Q L M + E++ ++DL + SF P +I+N AAY Sbjct: 1 MRILLTGASGQLGQVLQPMLARHGELLAPSSRELDLADRQALQSFLQQARPGLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA +A+ A +G P ++ STDYVFDG S P E PT P Sbjct: 61 TAVDKAESDVARAEAVNALAPMILAQQAQMLGAPLVHFSTDYVFDGKSARPYVETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG++KLAGE+ +A++ + Y ILRT+WVY +GSNFL +M RLA ER ++VV DQ G Sbjct: 121 LNVYGRTKLAGEQGIAAHCDAYWILRTSWVYGCYGSNFLKTMWRLAGEREYLTVVDDQIG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAER 236 PT IA + + +AH ++ S+R G++H++A GG SW FA+ I + Sbjct: 181 APTWTHTIADTLARMLAHG--ADAQQSVRDTTGLYHLSA-GGATSWHGFAQRILQLLRAQ 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + V I + YP A RP S LD L T ++ + TW+E + L Sbjct: 238 GETALLDPALVRPIASDAYPAIAQRPRNSRLDTGLLRRTFSLSLPTWEEALERCL 292 >gi|226726329|gb|ACO81753.1| RfbD [Herbaspirillum seropedicae SmR1] Length = 471 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/295 (39%), Positives = 168/295 (56%), Gaps = 11/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G +GQ+ Q L M + E++ ++DL + SF P +I+N AAY Sbjct: 1 MRILLTGASGQLGQVLQPMLARHGELLAPSSRELDLADRQALQSFLQQARPGLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA +A+ A +G P ++ STDYVFDG S P E PT P Sbjct: 61 TAVDKAESDVARAEAVNALAPMILAQQAQMLGAPLVHFSTDYVFDGKSARPYVETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG++KLAGE+ +A++ + Y ILRT+WVY +GSNFL +M RLA ER ++VV DQ G Sbjct: 121 LNVYGRTKLAGEQGIAAHCDAYWILRTSWVYGCYGSNFLKTMWRLAGEREYLTVVDDQIG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAER 236 PT IA + + +AH ++ S+R G++H++A GG SW FA+ I + Sbjct: 181 APTWTHTIADTLARMLAHG--ADAQQSVRDTTGLYHLSA-GGATSWHGFAQRILQLLRAQ 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + V I + YP A RP S LD L T ++ + TW+E + L Sbjct: 238 GETALLDPALVRPIASDAYPAIAQRPRNSRLDTGLLRRTFSLSLPTWEEALERCL 292 >gi|117919829|ref|YP_869021.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117612161|gb|ABK47615.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 291 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/293 (41%), Positives = 171/293 (58%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L + Q ++E + V R +D+ + F PD IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKLLNQIPEIEFLAVDREQLDITDYEAVNKLVSEFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +A+AA+S+G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAQAANSVGATILHISTDYVFAGDKVGEYVETDEV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P IYGKSKLAGE VA+ ++I+RTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGIYGKSKLAGELAVAAACPRHIIMRTAWVFCETGNNFIKTMLRLAQSRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA +I+IA L + + GI+H + G P VSW F+ IF + A+ Sbjct: 181 FGGPTYAGDIANTLIEIAQALY--AGNTHYGIYHFS--GLPHVSWYQFSCQIF-KQAKAQ 235 Query: 238 GPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 SK + I ++QYPT RPA S L C K+ T ++ W+ + N++ Sbjct: 236 KLVSKDMLINGISSEQYPTPVKRPANSKLSCRKIEQTFGVKPCDWQSALNNLM 288 >gi|126175091|ref|YP_001051240.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125998296|gb|ABN62371.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 291 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 122/291 (41%), Positives = 169/291 (58%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L Q ++E V R +D+ A F P IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKQLSQMPEIEFWAVDRTQLDITDAAAVAKLVNDFKPHAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAEDE ++++IN +G +A+AA+S G ++ISTDYVF G + E Sbjct: 61 AHTAVDKAEDEVALSYAINRDGPQWLAEAANSAGAVMLHISTDYVFAGDKQGEYRETDAI 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YGKSKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRL++ R E+ VV DQ Sbjct: 121 DPQGVYGKSKLAGELAVAAACPRHIILRTAWVFCETGNNFVKTMLRLSQSRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I +A I N + S GI+H + G P V+W FA IF ++ +G Sbjct: 181 FGGPTYAGDIANALITMA-KAISNGNQSF-GIYHYS--GLPHVNWHLFACEIFKQAKSQG 236 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I ++QYPT A RP S LDC+K+ I+ S W+ + + Sbjct: 237 LLDKEMNVKAITSEQYPTPAKRPKNSKLDCNKILQHFGIQASDWRAALNKL 287 >gi|194364284|ref|YP_002026894.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia R551-3] gi|194347088|gb|ACF50211.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia R551-3] Length = 312 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 118/302 (39%), Positives = 157/302 (51%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------DLLKPKDFASFFLSFS 50 M LV+G NGQ+ Q L V +++ R I D +P + Sbjct: 1 MTVLVLGGNGQVGQELLRALVPLGKVVTTTRSGILPDGSVCETADFDQPDSLPALLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P V++N AAYTAVD+AE E + AF++NAE G IA+ + +P ++ STDYVFDG Sbjct: 61 PSVVVNAAAYTAVDRAEREVDAAFAVNAEAPGVIARWCAAHDVPFVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG SK GE+ V + ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDEPTAPLGVYGISKRDGEDAVRAAGGRHLIFRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA Q + L G +H+TA G SW FAE IF Sbjct: 181 ALRVVADQIGTPTPAALIADVTAQALQH-----PGQLSGTWHLTAS-GQTSWYGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G V I + +YPT A RPA+S LD KL + W EG+ ++ Sbjct: 235 AEALATGVLAKVPAVEAIPSSEYPTPAKRPAWSVLDNRKLQQDLGTALPDWHEGLAIVMN 294 Query: 289 NI 290 I Sbjct: 295 EI 296 >gi|254482659|ref|ZP_05095897.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2148] gi|214037018|gb|EEB77687.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2148] Length = 293 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 165/291 (56%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ + L + VE I R +D+ +F P +IIN AAYT Sbjct: 4 KVLITGAAGQLGRELLRSVPEGVECIAATREILDIADAAQVRAFVRRERPGLIINAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A +IN GA +A A G I++STD+VFDG S TP +PT+PL Sbjct: 64 AVDKAESEQELAAAINVNGAANLATACAENGSRLIHVSTDFVFDGTSSTPYLPDAPTSPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG+SKLAGE+ V + + +I+RTAWVYS FG NF+ +MLRL ER E+SVV DQ GT Sbjct: 124 GEYGRSKLAGEQAVVAGLPSALIMRTAWVYSAFGGNFVKTMLRLMAEREELSVVADQVGT 183 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GP 239 PT A +A A+ A + SD L+G++H T D G SW DFA I E+ E G Sbjct: 184 PTWARGLADALWLAA----DQSD--LQGLYHWT-DAGVCSWYDFAVAIAEEALEIGLLQR 236 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I YPT A RPA+S LD + W+ +R++L + Sbjct: 237 MPRIHPIPGSAYPTPAARPAFSVLDKNSTWAVLKTEGLHWRSQLRSMLKEL 287 >gi|37678486|ref|NP_933095.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016] gi|37197226|dbj|BAC93066.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016] Length = 293 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 165/289 (57%), Gaps = 6/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G++GQ+ L + +I+ + R +D+ + + F +F P +IN AAY Sbjct: 1 MRVLIVGSSGQLGHCLVRSLQTEHDILALDRQQLDICEEQAVEKVFATFQPQFVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A+ +N EG +A+ G P ++ISTDYVFDG E P Sbjct: 61 TAVDKAESEPEMAYRVNEEGPKLLAQECHHHGCPLVHISTDYVFDGDKNGLYCEDDRPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYG SKLAGE V + Y ILRT+WV+S FG+NF+ +MLR ER ++ +V DQ G Sbjct: 121 GNIYGMSKLAGEHAVQHACSQYYILRTSWVFSEFGNNFVKTMLRQGAERTQLGIVSDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IAR I ++ + + G++H + G P VSW +FA+ IF + E+G Sbjct: 181 GPTYAGDIARVIGRLLERF-QFGEPVEYGLYHFS--GMPHVSWFEFAQAIFGLAHEQGVL 237 Query: 240 YSKVYR--IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV + T++YPT A RP S LD +KL + + S WK + + Sbjct: 238 KRKVELKPLSTREYPTAAIRPMNSRLDSTKLKSQLQLEASDWKAALNQL 286 >gi|84386902|ref|ZP_00989926.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] gi|84378192|gb|EAP95051.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] Length = 293 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 120/293 (40%), Positives = 174/293 (59%), Gaps = 12/293 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ L+ G GQ+ Q LS+ +++ + + R +D+ + F P +IIN Sbjct: 1 MRILITGCYGQVGSCLIQQLSNN--ENITVRALDREHLDITNHDAVNAAVAEFEPSIIIN 58 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE+E +++++IN +G +A+AA ++G ++ISTDYVF+G E Sbjct: 59 AAAHTAVDKAEEEVDLSYAINRDGPKYLAQAAQNVGAAILHISTDYVFEGNKAGEYVETD 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 TNP +YG+SKLAGE +VA ++ILRTAWV+ G+NF+ +MLRL + R +S+V Sbjct: 119 ATNPQGVYGESKLAGEIEVAEACEKHIILRTAWVFGESGNNFVKTMLRLGENRDALSIVG 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQFG PT A IA A+IQIA I D G++H + G P VSW DFA IF + E Sbjct: 179 DQFGGPTYAGDIANALIQIAKR-INQGDAVEYGVYHYS--GLPHVSWFDFANAIFDVAVE 235 Query: 236 RGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +G +K + I T QYPT A RP+ S L K+ +++ S WK G+ NI Sbjct: 236 QGVLANKPSLTSITTDQYPTPAKRPSNSRLSTEKITLGFSVKASDWKAGLNNI 288 >gi|262163807|ref|ZP_06031547.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM223] gi|262027787|gb|EEY46452.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM223] Length = 295 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 120/294 (40%), Positives = 173/294 (58%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ LV G +GQ+ Q LS+M DVE + V R +D+ F P+VIIN Sbjct: 2 MRILVTGCHGQVGYCLTQQLSAMA--DVEFLAVDREQLDITNLTQVDLVVNEFKPNVIIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E++++IN +G +A+AA+ +G ++ISTDYVF G E Sbjct: 60 AAAHTAVDRAEQEIELSYAINRDGPQYLAQAANRVGALILHISTDYVFAGDKLCAYVETD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT+P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV Sbjct: 120 PTSPQGVYGQSKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAEIRDTLGVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE 235 DQFG PT A IA+A+I +A ++E + G++H + G P +SW FA IF + E Sbjct: 180 DQFGGPTYAGDIAKALITMAKAIVEGKSVAF-GVYHFS--GVPHLSWHKFACTIFDNARE 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + +V I TK YPT A RP+ S LD K+ I S W+ + +++ Sbjct: 237 QALLSKTLQVNAITTKDYPTPAKRPSNSRLDSRKIHQNFGIAASDWQAALLHLV 290 >gi|93005457|ref|YP_579894.1| dTDP-4-dehydrorhamnose reductase [Psychrobacter cryohalolentis K5] gi|92393135|gb|ABE74410.1| dTDP-4-dehydrorhamnose reductase [Psychrobacter cryohalolentis K5] Length = 287 Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 168/288 (58%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ L ++ +I + +D+ P++IIN AAY Sbjct: 2 FRVLVTGAKGQVGSELVNLVPAGFTVIGLSSAQLDITDQDQVNVAVALHQPNLIINAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A++IN + +A+AA IP +ISTDYVFDG S TP E NP Sbjct: 62 TAVDKAESDSDNAYAINEKAVAWLAQAAAHADIPLFHISTDYVFDGESTTPYKETDSINP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG SKLAGE+ +A+ N ++ILRT+WV+S G+NF+ +MLRLAKER E+S+V DQ G Sbjct: 122 QSVYGASKLAGEQMLAATHNKHIILRTSWVFSARGNNFVKTMLRLAKERDELSIVGDQHG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PTSA IA + ++A L + +D+ GI++ + + SW +FA IF ++ E G Sbjct: 182 CPTSATSIADILWKLAE-LYQQTDSLPWGIYNFS-NSSACSWYEFAVEIFKQARESGFIP 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +I T YPT A RPA+S LDCSKL +I WK + I Sbjct: 240 QTPTIKKITTADYPTPAVRPAFSVLDCSKLEKLLGQKIPEWKSELSTI 287 >gi|120598287|ref|YP_962861.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. W3-18-1] gi|120558380|gb|ABM24307.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. W3-18-1] Length = 308 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 168/291 (57%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ SL Q ++E + V R +D+ + P+ IIN A Sbjct: 18 MKILITGSNGQVGSSLVKQLNQMPEIEFLAVDRQQLDITDCEAVNKLVNELKPNAIINAA 77 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA+S+G ++ISTDYVF G E Sbjct: 78 AHTAVDRAEQEVELSYAINRDGPQFLAQAANSVGATILHISTDYVFAGDKDGEYIETDTV 137 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRLA R E+ VV DQ Sbjct: 138 APQGVYGQSKLAGELAVTAACPRHIILRTAWVFYGTGNNFVKTMLRLAHNRDELGVVADQ 197 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+I +A L + + G++H G P VSW FA IF ++ E+ Sbjct: 198 FGGPTYAGDIANALIVMAKAL--QAGNTHYGVYHFA--GKPHVSWHQFAREIFKKANEQN 253 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV I ++QY T A RPA S LDC K+ + I+ S W+ + N+ Sbjct: 254 ILNKQMKVNAITSEQYLTPAKRPANSKLDCLKIEQSFGIKPSNWQAALNNL 304 >gi|85713611|ref|ZP_01044601.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] gi|85699515|gb|EAQ37382.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] Length = 308 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 114/288 (39%), Positives = 162/288 (56%), Gaps = 6/288 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ +L + + +I R DL P A +F PD+I+NPAAY Sbjct: 1 MRILLTGTGGQVGGALRLLLGKSGTVIAPSRSAFDLSNPDTLAGALDAFRPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE ++AF +NA+ AIA+ + +P I+ STDYVFDG P E SPT P Sbjct: 61 TAVDRAEDERDLAFLVNAKAPAAIAEWSARHRVPLIHFSTDYVFDGSGDKPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ YG SKLAG+ + + ++I RT+WVY+ G+NFL +++RLA ER E+ +V DQ G Sbjct: 121 LSAYGASKLAGDLAIHAAGGPHLIARTSWVYAATGANFLRTIVRLAGEREELRIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAERG 237 PT+A IA A+ +I + N G+ ++ A G SW FA I RG Sbjct: 181 APTTANAIANAVTRIVYPNTSNLSALFARHGGVINL-ACVGETSWHGFASAIVTGLKSRG 239 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S + I T +PT+A RP S LD S+L + + TW+E + Sbjct: 240 MKLSVKTIIPIATTDFPTRARRPGNSRLDLSQLQDRFGLTPPTWQEAL 287 >gi|99077993|ref|YP_611252.1| dTDP-4-dehydrorhamnose reductase [Ruegeria sp. TM1040] gi|99034936|gb|ABF61990.1| dTDP-4-dehydrorhamnose reductase [Ruegeria sp. TM1040] Length = 299 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 126/288 (43%), Positives = 159/288 (55%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L+ + +I VGR DL P A+ +P+ +IN AAY Sbjct: 19 MSILVFGATGQVARELA----RHEGVISVGREQADLSDPGACAALIRETAPEAVINAAAY 74 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+A A +GIP ++ISTDYVF G P P P Sbjct: 75 TAVDKAETEEELATVINGAAPGAMAAACVQMGIPFVHISTDYVFAGTGEAPWQTDDPVAP 134 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + Y ILRT+WV S G+NF+ +MLRL R ++SVV DQ G Sbjct: 135 PNAYGRSKRAGEEAVIAAGGTYAILRTSWVVSAHGNNFVKTMLRLGAARAQVSVVADQIG 194 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A +++A L+ S GI+H G P VSWA FA IF S Sbjct: 195 APTPARDIAEACLKMARQLVLEPKKS--GIYHF--QGAPYVSWAGFAAEIFAIS----NL 246 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T YPT A RP S LDC+ L I W+ G+++IL Sbjct: 247 ACEVVEIPTTDYPTPAVRPLNSRLDCTTLETVFGIPQPDWRRGLQDIL 294 >gi|84515470|ref|ZP_01002832.1| hypothetical protein SKA53_02391 [Loktanella vestfoldensis SKA53] gi|84510753|gb|EAQ07208.1| hypothetical protein SKA53_02391 [Loktanella vestfoldensis SKA53] Length = 289 Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 127/291 (43%), Positives = 170/291 (58%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A +L+ D+ I +GR DL P A+ DV+IN AAY Sbjct: 2 MHVLVFGQTGQVATALAQQTCADITITCLGRDRADLTDPAACAAIIAQTHADVVINAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A +INA A+A+A + IP ++ISTDYVF G P PT P Sbjct: 62 TAVDRAESEPDLARAINATAPAAMARACAARKIPFLHISTDYVFGGSGSRPWQVDDPTGP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L IYG++KLAGE+ V + +VILRT+WV+S G+NF+ +MLRL R +I+VV DQ G Sbjct: 122 LGIYGQTKLAGEDAVRAAAGAHVILRTSWVFSAHGANFVKTMLRLGAMRPDINVVADQHG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT+A IA A+I IA ++ + G +H + G P VSWA FA IF + G Sbjct: 182 GPTAADDIAAALISIARAF--HTGRGISGTYHFS--GSPNVSWAGFARTIFASA----GI 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S LDCS LA + I W+ +R++L ++ Sbjct: 234 DCAVQDIPTSAYPTPAARPANSRLDCSALARDYAIAQPDWQGSLRHVLQSL 284 >gi|237808787|ref|YP_002893227.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] gi|237501048|gb|ACQ93641.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] Length = 299 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 6/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G GQ+ L+ +++ + R +D+ P+ S + PDV+IN AA+ Sbjct: 7 KIMITGAYGQVGFCLTQQAQANGWDVLAIDRDKLDITDPQAVNSLVKEYQPDVVINAAAH 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + +F+IN +G +A+AA S+ ++ISTDYVF G E P P Sbjct: 67 TAVDKAETEIDASFAINRDGPKYLAEAATSVDAAMLHISTDYVFSGDKDGTYSEADPVAP 126 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGEE V + + ++ILRTAWV+ G+NF+ +MLRL +R ++ +V DQFG Sbjct: 127 QGVYGASKLAGEEAVITANSKHIILRTAWVFGEHGNNFVKTMLRLGSQRDQLGIVADQFG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG-- 237 PT A IA A++ +A + T GI+H G P V+W FA+ IF ++ E Sbjct: 187 GPTYAGDIAAALLVMAEKAVAAPATVSWGIYHFA--GEPHVNWHQFAQAIFDKAVEHKLL 244 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + T YPT A RPA S LDC K+ N I+ S W + + NI+ Sbjct: 245 AKAPQLNALTTADYPTPAKRPANSRLDCRKIFNEFGIQPSDWHKALENIV 294 >gi|260576536|ref|ZP_05844525.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sp. SW2] gi|259021259|gb|EEW24566.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sp. SW2] Length = 284 Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 163/291 (56%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+A+ L + Q + GR DL P+ + + +P+ +IN AAY Sbjct: 1 MRLLVFGQTGQVARELQRLAPQARYL---GRDAADLAHPETLGAILRAAAPEAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E A IN + A+A+A ++G+P ++ISTDYVFDG P PT P Sbjct: 58 TAVDRAETERSEALLINGQSPAAMAEACAALGVPFVHISTDYVFDGSGVQPFRPTDPTGP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE V + + +LRT+WV+S G+NF+ +MLRLA+ R ++VV DQ G Sbjct: 118 VNHYGHSKLVGEAGVRASGAVHAVLRTSWVFSAHGTNFVKTMLRLAQTRDRLTVVADQHG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IARA + +A L D + G++H G P +WA FA +F ++ Sbjct: 178 GPTPAAAIARACLTLAQTL--RDDPAKTGVYHFA--GAPDTTWAGFAREVFAQARL---- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +PT A RP S LDC+ T + W+EG+R++L + Sbjct: 230 AVAVEDISTSAFPTPAARPLNSRLDCTSTETTFGLPRPDWREGLRDVLKEL 280 >gi|251798953|ref|YP_003013684.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2] gi|247546579|gb|ACT03598.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2] Length = 283 Score = 202 bits (513), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 165/290 (56%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G NGQ+ + L+ + EII + R ++D+ + + PD +I+ AA Sbjct: 1 MRVAVTGANGQLGRELAMLDDNGRFEIIGLSRAELDITNLEQCRNVLAKLRPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP+ AF INA G IA AA IG +STDYVFDG P E TN Sbjct: 61 YTAVDKAESEPDEAFRINAAGTRNIAVAAREIGAKLCAVSTDYVFDGTGTVPYKEHDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SKLAGE+ V+S + Y I+RT+WV+ +G+NF+ +ML+LA +R ++ VV DQ+ Sbjct: 121 PRTVYGQSKLAGEQAVSSLHDRYFIVRTSWVFGAYGNNFVKTMLKLASQREQLKVVADQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++++ T GI+H + G SW +FA+ I ES G Sbjct: 181 GSPTYTRDLAIFLLELV-------STECYGIYHASGS-GVCSWFEFAQAIMEES----GS 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ T++YP A RP YS +D + + + W+E +R+ L N Sbjct: 229 STRIDPCTTEEYPRPAPRPHYSVMDHGAIRSNGFTPLRHWREALRHYLSN 278 >gi|114563992|ref|YP_751506.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] gi|114335285|gb|ABI72667.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] Length = 291 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 164/291 (56%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ + L + + + + R ++D+ F P++IIN A Sbjct: 1 MKILITGKNGQVGRCLVDLLEAQTGLTFLALDREELDITDSIQVDKIVTEFQPNIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E+AF+IN G +A AA+ I ++ISTDYVFDG S E T Sbjct: 61 AYTAVDKAEQESELAFAINRYGPQNLAYAANKINAAILHISTDYVFDGNSAESYTESDVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 121 APQGEYGRSKLAGEHAVAQACPKHIILRTAWVFGERGNNFVKTMLRLAKTRESLGVVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA+AI+ I+ ++ S GI+H + G P VSW FA+ IF + E+ Sbjct: 181 FGGPTYAGDIAKAILTISKQVVRESKA--YGIYHFS--GFPHVSWYIFAKKIFEIALEQD 236 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT A RPA S L+C K+ N I S W+ + I Sbjct: 237 LHVQPIQVNPITTLDYPTPAKRPANSRLNCDKIHNAFGIEQSDWQAALVRI 287 >gi|237748595|ref|ZP_04579075.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes OXCC13] gi|229379957|gb|EEO30048.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes OXCC13] Length = 278 Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 121/284 (42%), Positives = 163/284 (57%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+ L + I V R ++D+ D F S D IIN AAYTAV Sbjct: 3 LVTGAGGQLGMELRVLLKDSA--IYVDRNELDISSETDVRRFLQQNSFDCIINCAAYTAV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAEDEP +A ++N GA +AK +I I+ISTDYVFDG P E PT P+++ Sbjct: 61 DKAEDEPVLADAVNHLGAKWLAKYGRTI----IHISTDYVFDGAHSKPYLEDDPTYPVSV 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE+ V + VI+RTAW+YS GSNFL +MLRL +ER ++VV DQ GTPT Sbjct: 117 YGQSKLRGEQAVLNNAETAVIIRTAWLYSAHGSNFLKTMLRLGRERDHLNVVSDQVGTPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A+AI++I + + I+H T + G SW DFA I + G KV Sbjct: 177 FAGDLAKAIVRI----LPKVKAGKKNIYHFTNE-GVCSWYDFAHAIM----KIAGLSCKV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I +K YPTKA RP YS L+ K+ + + I W++ + +L Sbjct: 228 HPIESKNYPTKATRPFYSVLNKEKIKSDFKLEIPHWRDALIEVL 271 >gi|241662192|ref|YP_002980552.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D] gi|240864219|gb|ACS61880.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D] Length = 305 Score = 201 bits (512), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 161/293 (54%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+IG NGQ+ L ++ +GR D DL +P +F PDV+IN AAYTAV Sbjct: 12 LLIGKNGQVGFELRRSLAPLGRVVALGRADCDLTQPDQLRQAVRAFQPDVVINAAAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EP+ A ++N G +A+ + G ++ S+DYVFDG P E NP ++ Sbjct: 72 DNAETEPDAALAVNGVAPGVLAEMVRTNGGLLVHYSSDYVFDGAKDCPYLETDVPNPQSV 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE +A+ N ++LRT+WV G NF+ ++LR A+ER+ + V+ DQ G PT Sbjct: 132 YGRTKLEGERAIAASGANALVLRTSWVAGAHGDNFVKAILRQARERKHLRVIADQLGAPT 191 Query: 184 SALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER----G 237 SA IA QI H + D + G++H+ A G +W +A + +A R Sbjct: 192 SASLIADVTAQIVARHWVYGERDALMPGVYHLAA-AGQTTWHGYASEVLRYAAGRCVDLK 250 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I ++ ++A RPA SCLD SKL T + + W+EG++ +L I Sbjct: 251 AAVAGIEAIPAVKWHSRASRPANSCLDTSKLRETFGVHLPNWQEGIQCLLEQI 303 >gi|251790436|ref|YP_003005157.1| dTDP-4-dehydrorhamnose reductase [Dickeya zeae Ech1591] gi|247539057|gb|ACT07678.1| dTDP-4-dehydrorhamnose reductase [Dickeya zeae Ech1591] Length = 285 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 119/290 (41%), Positives = 161/290 (55%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + Q ++ +D+ + S+ PD I+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPQGWSVLATDTDSLDITDEAQVQATVASWQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A+AA G I++STDYVFDG + P E T+P Sbjct: 61 TAVDKAESEPELAARINVAGPEYLARAARQQGARFIHVSTDYVFDGTATRPYIETDATHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V I+RTAWV+S +G+NF+ +MLRL +ER + VV DQ G Sbjct: 121 LGVYGQTKLDGERAVLKVNPAAQIVRTAWVFSEYGNNFVKTMLRLGRERDSLGVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA AII + E G++H D VSW FA+ IF A++ Sbjct: 181 CPTYAGDIADAIIGVLQQQAEG------GLYHFCGD-EEVSWHAFADAIF-AVADKQQLL 232 Query: 241 SK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S+ V I T+QYPT A RPAYS L+C+K+A I S W+ + I+ Sbjct: 233 SRVPTVNAITTEQYPTPAARPAYSTLNCTKIARL-GISPSAWRAALSVII 281 >gi|296163283|ref|ZP_06846045.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] gi|295886465|gb|EFG66321.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] Length = 299 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 157/283 (55%), Gaps = 6/283 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ ++ V R +D+ P + + P +I+NPAAYTAV Sbjct: 11 LLTGVNGQVGFELARTLQGLGTVVAVDRAAMDMSDPDRVRAVVRNIRPALIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E ++A IN E G +A+ A +G ++ STDYVF+G P E PT+P N+ Sbjct: 71 DKAEEELDLAMRINGEMPGVLAEEAKKLGAALVHYSTDYVFNGEKDCPYVEDDPTDPQNV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KLAGE+ +A+ ++I RT+WVY G NFLL+MLRL ER E+SVV DQ G PT Sbjct: 131 YGRTKLAGEQAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAEREELSVVADQIGAPT 190 Query: 184 SALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 + IA + + SD + G++H+TA G SW FA+ IF S P Sbjct: 191 WSNTIATLTSNVLAQAVGGSDDWWKQSSGVYHLTASGA-TSWHGFAQAIFDNSKLPKKP- 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I YPT A RPA S + KL +T +R W E + Sbjct: 249 -TVKPIPAASYPTPAARPANSRMSSDKLFSTFGVRAPKWDEAL 290 >gi|229106719|ref|ZP_04236950.1| hypothetical protein bcere0019_54990 [Bacillus cereus Rock3-28] gi|228676717|gb|EEL31332.1| hypothetical protein bcere0019_54990 [Bacillus cereus Rock3-28] Length = 279 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/290 (39%), Positives = 165/290 (56%), Gaps = 17/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G GQ+ Q + +C+ Q E+ GR ++D+ + LS +PD+II+ Sbjct: 1 MKVLVTGAKGQLGQDV--LCLLENQQWEVFGFGREELDITNEEKVREKVLSINPDIIIHT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT VD+AE + E AF +NAEG +A+AA+++ Y+STDYVFDG P Sbjct: 59 AAYTQVDQAESDEETAFKVNAEGTKYLAQAAEAVKAKFCYVSTDYVFDGTKNEPYKVDDQ 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP +YG SKLAGE Y + I+RT+WV+ ++G+NF+ +MLRLA+E+ E+ VV D Sbjct: 119 TNPQTVYGSSKLAGEHYTQKYCSKSYIVRTSWVFGLYGNNFVKTMLRLAEEKTELGVVHD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT +AR II NL++ T GI+H ++ G SW DFA+ IF +S Sbjct: 179 QVGSPTYTPDLARFII----NLVK---TDKYGIYH-GSNSGVCSWYDFAKEIFKQSNIE- 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T+ +P A RP YS LD + WKE +++ L Sbjct: 230 ---IVVNPLTTENFPRPAARPKYSVLDKGMIEENGFELFQDWKEALKDFL 276 >gi|91794012|ref|YP_563663.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] gi|91716014|gb|ABE55940.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] Length = 291 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 171/291 (58%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ L + D+ + + R +D+ + + F PD+IIN A Sbjct: 1 MRILITGKNGQVGSCLVELLDAETDLTFLALDREQLDITDANEVSKVVAEFKPDIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE E E+A++IN +G +A AA+ + I++STDYVF G S E T Sbjct: 61 AYTAVDRAEKECELAYAINRDGPYNLALAANDVNALIIHLSTDYVFSGNSSESYVESDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG+SKLAGE+ V + ++ILRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 121 GPQSEYGRSKLAGEQAVVLACSRHIILRTAWVFGEHGNNFVKTMLRLAKTRDTLDVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA+AI+ I++ +++ + G++H + G P VSW DFA+ IF + ++G Sbjct: 181 FGGPTYAGDIAKAILAISNQVMKGNQA--YGVYHYS--GFPHVSWYDFAKTIFSTALQQG 236 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +V I T Y T A RPA S LDC K+ I S W+ ++ I Sbjct: 237 FLKNTIQVRPITTLDYLTPAKRPANSRLDCHKINIAFVIEQSDWQSALKQI 287 >gi|294624436|ref|ZP_06703124.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665242|ref|ZP_06730539.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601259|gb|EFF45308.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604993|gb|EFF48347.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 121/301 (40%), Positives = 162/301 (53%), Gaps = 22/301 (7%) Query: 1 MKCLVIGNNGQIAQSL------------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS 48 M LVIG +GQ+ L +S Q + + R D++ L D A Sbjct: 1 MTTLVIGASGQVGTELLRVLAPLGTVVAASRSGQLADGLSCERIDLNELASLDLA--LNR 58 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P +++N AAYTAVD+AE E + AF NAE G IA+ +P ++ STDYVFDG Sbjct: 59 VRPALVVNAAAYTAVDRAEQERDAAFRANAEAPGVIAQWCARADVPLVHYSTDYVFDGQG 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P T PL +YG+SKLAGE V + ++I RTAWVY+ G NFL +MLR+ E Sbjct: 119 TRPYLPDDATAPLGVYGQSKLAGERAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAE 178 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R + VV DQ GTPT A IA AH L + + S G++H+TA G +W FAE Sbjct: 179 RDVLRVVADQIGTPTPAALIADI---TAHALRQPGEPS--GLWHLTA-AGQTTWHGFAEA 232 Query: 229 IFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 IF ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ + Sbjct: 233 IFAQARARGLLARTPRVEAIGTADYPTPAKRPAYSRLDTHSLQDTFGVRLPDWQDGLSQV 292 Query: 287 L 287 L Sbjct: 293 L 293 >gi|332306500|ref|YP_004434351.1| dTDP-4-dehydrorhamnose reductase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173829|gb|AEE23083.1| dTDP-4-dehydrorhamnose reductase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 287 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 112/290 (38%), Positives = 163/290 (56%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ L + VE+ G ++D+ + D A F PDV+IN AA Sbjct: 1 MKVLITGKNGQLGWELCHRAPKAGVEVFAFGSSELDITQSGDVAQVFSCVKPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + E A+ +N GA IA A IG +++STD+VFDG P N Sbjct: 61 YTAVDKAESDQENAYLVNETGAVNIANACKDIGARLLHVSTDFVFDGTKHCPYTITDTPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE + + + VI+RTAWVYS G+NF+ +MLRL +E+ ++ +V DQ Sbjct: 121 PLGVYGASKLAGELGIQNVSPEAVIVRTAWVYSTHGNNFVKTMLRLMQEKPQLGIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 GTPT A +A+ + + ++G++H T D G SW DFA I + E+G Sbjct: 181 GTPTYAAGLAQWLWAVV------GQGDIKGMYHWT-DAGVASWYDFAVAIQELALEKGLL 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I+ +QYPT A RPA+S +D + N + W++ + ++L Sbjct: 234 KQAIPILPIYAQQYPTPAKRPAFSVIDKTSAENDTGLHTVHWRKQLASML 283 >gi|319791461|ref|YP_004153101.1| dtdp-4-dehydrorhamnose reductase [Variovorax paradoxus EPS] gi|315593924|gb|ADU34990.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus EPS] Length = 296 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 164/296 (55%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E++ + + D +P+ A L PDVI+N Sbjct: 1 MKLLLLGKGGQVGWELQRSLAPLGELVALDFDSTDFNADFSRPEQLAETVLKVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA G +A+AA IG ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDFARKLNATSPGVVAEAAQQIGALMVHYSTDYVFDGSGSKPWKEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL+IYG +KL GE+ VA + ++I RT+WVY+ G NF +MLR+AKER +++V+ Sbjct: 121 ATGPLSIYGSTKLEGEQLVAKHCARHLIFRTSWVYAARGGNFAKTMLRIAKERDKLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ D S G++H A GG +W +A ++ ++ Sbjct: 181 DQFGAPTGAELLADITAHAIRATLQ--DPSKAGLYHAVA-GGVTTWHGYARFVIEQAKAA 237 Query: 237 G-----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G GP + V + T +PT A RP S LD +KL +T + + W+ GV +L Sbjct: 238 GVELKAGPEA-VEPVPTTAFPTPAKRPHNSRLDTTKLQSTFGLVLPEWQSGVARML 292 >gi|148252645|ref|YP_001237230.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. BTAi1] gi|146404818|gb|ABQ33324.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. BTAi1] Length = 300 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 121/272 (44%), Positives = 164/272 (60%), Gaps = 8/272 (2%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + V+G +GQ+A++L +S D+ + GR D+ F PD++INPAA Sbjct: 5 RLYVLGRHGQVARALQEASEAQPDLVVGFGGRDAFDIADTDAVLQALHGFQPDIVINPAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE++ A+ +N +GA A+A+A+ + IP I++STDYVFDG P E Sbjct: 65 YTAVDRAEEDAAAAYHVNRDGARAVAEASARLEIPTIHLSTDYVFDGAKPAPYVEDDAPA 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKLAGE VA+ +VILRTAWVYS FG NF+ +MLRLA R + VV DQ Sbjct: 125 PINVYGASKLAGELAVAAANRRHVILRTAWVYSPFGQNFVRTMLRLASSRDTLRVVNDQV 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGP--VSWADFAEYIFWESAER 236 G PTSAL IARAI+ IA + T+ G+ H+ GP V+W DFA I +A Sbjct: 185 GCPTSALDIARAILAIARRIDRAGWTNEFGGVTHI---AGPDVVTWYDFACSIMRVAAAH 241 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G +++ I T+ YPT A RPA S L C +L Sbjct: 242 GARTARIEPIPTRDYPTPARRPANSRLSCDRL 273 >gi|146294972|ref|YP_001185396.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] gi|145566662|gb|ABP77597.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] Length = 294 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 169/291 (58%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K LV G NGQ+ + L + + + + + R +D+ + + F PDVIIN A Sbjct: 4 IKVLVTGCNGQVGRCLVTQMQTMSSITLCALERERLDITNREQVDTVVNQFHPDVIINAA 63 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E+ ++IN +G +A+AA+ +G ++IS+DYVF G E Sbjct: 64 AYTAVDKAEQEIELCYAINRDGPKYLAEAANQVGALILHISSDYVFSGRKHGLYTEDDIP 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SKLAGE +VA+ ++ILRTAWV+ G NF+ +ML L + E+ VV DQ Sbjct: 124 DPLGVYGQSKLAGEIEVANLCPRHIILRTAWVFGEHGKNFVNTMLGLTQTHDELGVVADQ 183 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA ++I I I + + GI+H + G P VSW FAEYIF ++ + G Sbjct: 184 FGGPTYAADIAASLITIT-KAIRLKNGANFGIYHYS--GEPHVSWHQFAEYIFEQAFDVG 240 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT+A RPA S LDC K+ I S W+ ++N+ Sbjct: 241 LINKEIRVNAITTTDYPTQATRPANSKLDCRKIMKQFGIAPSDWQAALKNL 291 >gi|58580418|ref|YP_199434.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425012|gb|AAW74049.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 302 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 119/302 (39%), Positives = 160/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R G+ PD D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG + Sbjct: 61 PSRVVNAAAYTAVDRAEQDREGATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGKA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPTSA IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTSAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|261378780|ref|ZP_05983353.1| dTDP-4-dehydrorhamnose reductase [Neisseria cinerea ATCC 14685] gi|269144758|gb|EEZ71176.1| dTDP-4-dehydrorhamnose reductase [Neisseria cinerea ATCC 14685] Length = 287 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + +F PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVFNMVKNFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDKAE+ AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TSVDKAEENVTTAFAVNASAVYNLASAAHRTHARFIHISTDYVFDGQANKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LNIYGKSK AGE S + +ILRT+W++S +G NF+ +ML LA ER + VV +Q G Sbjct: 121 LNIYGKSKAAGELLALSANSESLILRTSWLFSEYGDNFVRTMLNLANERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII+ L++ S + +RGI+H A G SW +FA +IF + ++ Sbjct: 181 CPTYAGDLAAAIIR----LLQQS-SPVRGIYHF-AGGKSASWYEFARHIFQTALQQDTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PVPELNAVSDEEYPDAASRPPYSILDCRKIESDFGIKPSDWQKALSQVVLKL 286 >gi|163793775|ref|ZP_02187749.1| dTDP-4-dehydrorhamnose reductase [alpha proteobacterium BAL199] gi|159180886|gb|EDP65403.1| dTDP-4-dehydrorhamnose reductase [alpha proteobacterium BAL199] Length = 302 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 114/269 (42%), Positives = 151/269 (56%), Gaps = 4/269 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ +L + D + I GR +DL P+ A+ + +PD ++NPAA Sbjct: 1 MQVLVTGITGQVGGALVARSTPDGMNWIPAGRDRVDLSAPRSIAAAIDALAPDAVVNPAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + E AF +N +G A+A A + GIP + +STDYVFDG P P Sbjct: 61 YTAVDVAETDQETAFRVNRDGPAALAAACAARGIPLLQVSTDYVFDGTGSRPYRPSDPVA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL YG SK GEE V S ++VILRTAWVY+ G NF+ +MLR+ ER E+ VV DQ Sbjct: 121 PLGAYGTSKQEGEEAVRSTLADHVILRTAWVYAATGKNFVNTMLRVGAERDELRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A IA ++ + + ++RG H T G +W A+ +F + G Sbjct: 181 GTPTPAEDIATVLLTVLKAW--QAGVAVRGTHHFTCS-GETTWHGLADAVFRRAERHWGR 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 V+ I T YPT A RPAYS LD S L Sbjct: 238 RPIVHPIGTADYPTPAARPAYSVLDNSTL 266 >gi|170692119|ref|ZP_02883283.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] gi|170143403|gb|EDT11567.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] Length = 308 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 154/291 (52%), Gaps = 8/291 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L+ ++ V R +DL + P +I+NPAAYTAV Sbjct: 11 LVTGVNGQVGYELARTLQGLGHVVAVDRSTLDLSNLDQIRAVVRDVKPALIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE EPE+A IN E G +A+ A +G I+ STDYVFDG + E P NP N+ Sbjct: 71 DKAEQEPELAMRINGEAPGVLAEEARKLGAALIHYSTDYVFDGEKQGAYVESDPANPQNV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQFG PT Sbjct: 131 YGRSKLAGEQAIAATGENHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAPT 190 Query: 184 SALQIARAIIQIAHNLIENSDTS-----LRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 IA IA D++ GI+H+ A G SW FA IF + Sbjct: 191 WCNTIATLTAHIAAQSFATPDSASWWRERSGIYHLCA-GDATSWHGFASAIFDLADLPQR 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P I YPT A RP+ S + KLA + W++ ++ L + Sbjct: 250 P--NTLPIPAADYPTPARRPSNSRMSNDKLARVFGLAAPHWRDALKLCLTD 298 >gi|83955936|ref|ZP_00964447.1| hypothetical protein NAS141_03933 [Sulfitobacter sp. NAS-14.1] gi|83839700|gb|EAP78878.1| hypothetical protein NAS141_03933 [Sulfitobacter sp. NAS-14.1] Length = 288 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 119/291 (40%), Positives = 164/291 (56%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ DV+I + R D+DL P A+ PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGDDVQITALARADVDLTDPATCAAAIDDHEPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A INA+ A+A+A + IP + ISTDYVF G+ TP + PT+P Sbjct: 61 TAVDKAESDAETAQIINADAPAAMARACAARDIPFVSISTDYVFSGVGNTPWEPADPTDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG++K GE + Y +LRT+WV S G+NF+ +MLRL ER +++V +Q G Sbjct: 121 QGVYGRTKRDGEVAIVKAGGRYAVLRTSWVVSAHGNNFVKTMLRLGAEREALTIVANQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A +IA+A IA L+ S+ S GI+H + G P SWADFA IF + Sbjct: 181 GPTGAAEIAQACEIIAKALVSGSEKS--GIYHFS--GAPDTSWADFARAIF----DAAKI 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ I W + + +IL + Sbjct: 233 PCAVTDIPSSDYPTPAKRPLNSRLDCTTTEAAFGISRPDWHQSLTHILTQL 283 >gi|271499810|ref|YP_003332835.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech586] gi|270343365|gb|ACZ76130.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech586] Length = 285 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 160/289 (55%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + ++ +D+ + S+ PD I+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPHGWSVLATDADSLDIADEAQVQATVKSWQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A+AA G I++STDYVFDG + P E T+P Sbjct: 61 TAVDKAESEPELAARINVAGPEYLARAARQQGARFIHVSTDYVFDGTATRPYIETDTTHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V I+RTAWV+S +G+NF+ +MLRL +ER + VV DQ G Sbjct: 121 LGVYGQTKLDGERVVLKVNPAAQIVRTAWVFSEYGNNFVKTMLRLGRERESLGVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A IA AII + L + +D G++H D VSW FA IF + E+ Sbjct: 181 CPTYAGDIADAIISL---LQQQADG---GLYHFCGD-EEVSWHKFASTIFTLAHEQQVLA 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T+QYPT A RPAYS LDC+K+A I S W+ + I+ Sbjct: 234 RVPVVNAITTEQYPTPAARPAYSTLDCAKIARL-GIPPSAWRAALSTII 281 >gi|331647691|ref|ZP_08348783.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli M605] gi|331043415|gb|EGI15553.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli M605] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA G AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATGVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|92116640|ref|YP_576369.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] gi|91799534|gb|ABE61909.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] Length = 304 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 168/295 (56%), Gaps = 12/295 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ ++ G NGQ+ +L + + +I R DL KP+ A F PD+IINPAAY Sbjct: 1 MRIVLTGTNGQVGGALRPLLEKGGTVIAPSRIAFDLSKPETLAEALDGFKPDLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE E+AF +NA+G AIA + +P I+ STDYVFDG + P E SPT P Sbjct: 61 TAVDRAEDERELAFLVNAKGPAAIAAWSARHRVPLIHFSTDYVFDGSNDRPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAG+ + ++I+RT+WVY+ G+NFL ++ RLA ER+E+ +V DQ G Sbjct: 121 LSVYGASKLAGDLAIRVAGGPHLIVRTSWVYAASGANFLRTIARLAGERKELRIVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT------ADGGPVSWADFAEYIFWESA 234 PT+A IA ++ ++ ++L G+F A G SW FA I Sbjct: 181 APTTASAIA----AAVAGIVVSNGSNLEGLFARNGGVVNLACAGETSWYGFASAIVAGLK 236 Query: 235 ERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RG + + I T +PT+A RP S LD S+L + + TW+E + + L Sbjct: 237 SRGVKLAVEMITPIATADFPTRAKRPGNSRLDLSRLRDRLRVTTPTWQEALSSEL 291 >gi|311278964|ref|YP_003941195.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1] gi|308748159|gb|ADO47911.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1] Length = 293 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 171/291 (58%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L+ + +VE++ + +D++ + + PD+IIN A Sbjct: 1 MKVLLTGCNGQVGYCLAEQLKKISNVELLAFDKEQLDIVDTEQVNNIVSEKKPDIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E ++A+SIN GA +A+AA +G I+ISTDYVF G E T Sbjct: 61 AYTAVDKAEAESQLAYSINHIGAKNLAEAATKVGALLIHISTDYVFPGTKEGLYTESDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YG+SKL GE + + Y+I+RTAWV+ G NF+ +MLRLAK +++ VV DQ Sbjct: 121 GPVSVYGRSKLDGENAIIASCAKYIIIRTAWVFGEHGHNFVKTMLRLAKTNKQLKVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT A IA+AI+ IA ++ +T G++H + G P V+W+DFA IF ++ ++ Sbjct: 181 QGGPTYAGDIAKAIVAIAVKFMK-EETVAYGLYHYS--GLPHVTWSDFAREIFNKAKDKN 237 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT A RP S L+ ++ +I+ S W+ + +I Sbjct: 238 VLADIPQVIDIATTDYPTPAQRPKNSKLNTERITQEFDIQASDWQIALNSI 288 >gi|291615366|ref|YP_003525523.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] gi|291585478|gb|ADE13136.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 157/287 (54%), Gaps = 6/287 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L EII + +DL P PD+I+NPAAYT Sbjct: 3 RILVTGKNGQVGWELQRSLAAFGEIIALDSDSMDLADPDAIRRTIREVRPDIIVNPAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A ++N G +A+ A +G ++ STDYVFDG P E NP Sbjct: 63 AVDKAESEMELANAVNGIAPGVLAEEAKLLGAILVHYSTDYVFDGSKPAPYVESDVPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ V + ++I RT+WVY + G NF+ +MLRLA+ER E+ +V DQFG Sbjct: 123 SVYGRTKLAGEQAVRASGCKHLIFRTSWVYGVHGGNFVKTMLRLARERNELRIVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA + HN + + D L G++H+TA G +W FAE I E+ + Sbjct: 183 PTWAKDIANSTATALHNWQQLAWDDRLSGLYHLTA-AGRTNWHQFAETIIREARKYDTAL 241 Query: 241 S----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + V I T +YP A RP S L K+ N I + W++ + Sbjct: 242 AAKTIAVNPIATHEYPLPAKRPVNSVLANDKVRNAFGIAMPEWQDSL 288 >gi|54873718|gb|AAV41067.1| RmlD [Shigella boydii] gi|72003792|gb|AAZ65832.1| putative dTDP-4-dyhydrorhamnose reductase [Escherichia coli] gi|115503036|gb|ABI98961.1| RmlD [Escherichia coli] gi|332343821|gb|AEE57155.1| dTDP-4-dehydrorhamnose reductase RfbD [Escherichia coli UMNK88] Length = 299 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWYDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G P + K+ + T YPT A RP S LD K + + W+ GV+ +L Sbjct: 235 REAGIPLALNKLNAVPTTAYPTLARRPHNSRLDTEKFQQNFALVLPDWQIGVKRML 290 >gi|182415801|ref|YP_001820867.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] gi|177843015|gb|ACB77267.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] Length = 292 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 152/287 (52%), Gaps = 2/287 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L +++ V PD+D P +P+++IN AAYT Sbjct: 5 KILLFGKVGQVGWELRRTLAPMSQLVAVDYPDVDFTAPDSIRRAIAEAAPNIVINAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDK E E +A INA+ G +A+ A G ++ STDYVFDG +P E NPL Sbjct: 65 AVDKCESEFALAKQINADAPGVMAEEAQRRGALLVHYSTDYVFDGTKTSPYVEADAPNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG+SKLAG+E + N++I R WVY G+NF+L+M RLA+ER ++ VV DQFG Sbjct: 125 SAYGRSKLAGDEAIRRTGCNHLIFRLCWVYGARGANFMLTMQRLAREREKLRVVADQFGC 184 Query: 182 PTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + IA ++ +D +L G +H+ A G SW FA I Sbjct: 185 PTWSRMIAETTAHALRSVRSAADARALSGAYHLAASGH-TSWHGFASAIIDLMPLDARKC 243 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + +YPT RPAYS L C+KL +R+ W E +R ++ Sbjct: 244 RAVEAITSAEYPTPTKRPAYSVLSCAKLEQAFGLRLPDWHESLRQVV 290 >gi|224823817|ref|ZP_03696926.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] gi|224604272|gb|EEG10446.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] Length = 296 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 111/293 (37%), Positives = 165/293 (56%), Gaps = 5/293 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G+NGQ+ L E+I + R ++DL P + + P +I+NPAAYT Sbjct: 3 RILITGSNGQVGFELKHALAPLGEVIALTRQEMDLADPASILAALNRYQPAIIVNPAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A +INA+ G +A+ A+ I+ STDYVFDG E NP Sbjct: 63 AVDKAETEVELAMAINAKAPGVMAEWAEQHDALLIHYSTDYVFDGNKDGAYCEDDTANPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK GE+ + + T +++ILRT+WV G NFL ++LRLA ER ++VV DQ G Sbjct: 123 SVYGRSKWEGEQAIRTCTAHHLILRTSWVVGAHGGNFLKTILRLAHERDSLNVVVDQIGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT A IA Q+ +D G +H+TA G SW D+A ++ + ++ P Sbjct: 183 PTPAALIADITAQLISCYRLPTDQFNYGTYHLTA-SGETSWYDYARFVVRLAEQQRCPLR 241 Query: 241 ---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S + I T YP A RPA S LDCSKL++ + + W++GV +++ + Sbjct: 242 LAASAIRPISTSDYPLPAPRPANSRLDCSKLSHHFGLALPHWQQGVAHVVSQL 294 >gi|74317795|ref|YP_315535.1| dTDP-4-dehydrorhamnose reductase [Thiobacillus denitrificans ATCC 25259] gi|74057290|gb|AAZ97730.1| dTDP-4-dehydrorhamnose reductase [Thiobacillus denitrificans ATCC 25259] Length = 297 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 153/283 (54%), Gaps = 5/283 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G NGQ+ L E++ + ++L P+ + +P +I+NPAAYT Sbjct: 4 RILLTGPNGQVGWELQRTLGSLGEVVALDSSALNLADPRQVRETVRALAPRIIVNPAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A ++N +A+ A + ++ STDYVF+G P E P +PL Sbjct: 64 AVDKAESEPELARAVNVVAPALLAEEAHRLDALLVHYSTDYVFNGSGSRPWREDDPCDPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG +KL GE + ++I RT+WVY GSNFLL+M RL +ER E+ +V DQ G Sbjct: 124 NVYGATKLEGERAIQESGCRHLIFRTSWVYGARGSNFLLTMTRLMRERPELKIVADQMGA 183 Query: 182 PTSALQIARAIIQIAHNL----IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT +A A QI L +D + G++H A+GG SW FAE I E Sbjct: 184 PTWCRDLAEATAQILSQLCAPQTRLTDPAPWGVYH-AANGGETSWHGFAEAIQRLEGEGP 242 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++++ I + YPT A RP S LD KLA +R+ W+ Sbjct: 243 AAHARLLPIPSSDYPTPARRPLNSRLDSDKLARVFGLRLPDWR 285 >gi|166713450|ref|ZP_02244657.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 302 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/302 (39%), Positives = 159/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R G+ PD D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDKLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|119947065|ref|YP_944745.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] gi|119865669|gb|ABM05146.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] Length = 294 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 166/293 (56%), Gaps = 12/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G+ GQ+ L+ D + + + +D+ + F P +IIN A Sbjct: 1 MRVLITGSKGQVGHCLTEQLRNYTDAQFLALDSKGLDITDQSAVQAVVNEFKPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDE ++A++IN +GA +A+AA S+ ++ISTDYVF G E T Sbjct: 61 AYTAVDRAEDESDLAYAINRDGAKYLAEAAQSVNAVILHISTDYVFSGDKEGMYTEADLT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P IYG+SKLAGE+ V + ++ILRTAWV+ G+NF+ MLRLAK + +V DQ Sbjct: 121 SPQGIYGESKLAGEKAVIEACSRHIILRTAWVFGEHGNNFVKIMLRLAKTHDTLGIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAE-- 235 FG PT A IA A++ +A L N D GI+H + G P VSW+ FA+ IF E+ + Sbjct: 181 FGGPTYAGDIASALVTVAKTL-SNGDNDKYGIYHYS--GFPHVSWSQFAQAIFDEAVQQT 237 Query: 236 --RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + P V I T YPT A RPA S L + + + + S WK ++NI Sbjct: 238 VLKQSPV--VNSITTADYPTPAKRPANSKLSTTLIKDKFGVNASDWKAALQNI 288 >gi|319424480|gb|ADV52554.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens 200] Length = 294 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 168/291 (57%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K LV G NGQ+ + L + + + + R +D+ + + F PDVIIN A Sbjct: 4 IKVLVTGCNGQVGRCLVTQMQTMSSITLCASERERLDITNREQVYTVVNQFHPDVIINAA 63 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E+ ++IN +G +A+AA+ +G ++IS+DYVF G E Sbjct: 64 AYTAVDKAEQEIELCYAINRDGPKYLAEAANQVGALILHISSDYVFSGRKHGLYTEDDIP 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SKLAGE +VA+ ++ILRTAWV+ G NF+ +ML L + E+ VV DQ Sbjct: 124 DPLGVYGQSKLAGEIEVANLCPRHIILRTAWVFGEHGKNFVNTMLGLTQTHDELGVVADQ 183 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA ++I I I + + GI+H + G P VSW FAEYIF ++ + G Sbjct: 184 FGGPTYAADIAASLITIT-KAIRLKNGANFGIYHYS--GEPHVSWHQFAEYIFEQAFDVG 240 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT+A RPA S LDC K+ I S W+ ++N+ Sbjct: 241 LINKEIRVNAITTTDYPTQATRPANSKLDCRKIMKQFGIAPSDWQAALKNL 291 >gi|254973883|ref|ZP_05270355.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-66c26] gi|255091268|ref|ZP_05320746.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile CIP 107932] gi|255312927|ref|ZP_05354510.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-76w55] gi|255515686|ref|ZP_05383362.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-97b34] gi|255648780|ref|ZP_05395682.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-37x79] gi|260682000|ref|YP_003213285.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196] gi|260685598|ref|YP_003216731.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291] gi|306518897|ref|ZP_07405244.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile QCD-32g58] gi|260208163|emb|CBA60476.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196] gi|260211614|emb|CBE01844.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291] Length = 290 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/297 (40%), Positives = 172/297 (57%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVE-----IIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L S Q + I+ R D+D+ + +F L PD Sbjct: 1 MKILITGSNGQLGKELVSQLEAINQSINQPKYVILATTRNDLDISNQTNIDNFILHNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AAYT VD ED EIA+ INA G +A A++ + ++ISTDYVF+G S+ P Sbjct: 61 VIVNCAAYTKVDACEDNIEIAYKINALGVRNLAIASEKVNAKLVHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + +A+ II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLAKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNIL 287 E KV I + ++ KA RP YS LD KL ++ R W+E + L Sbjct: 230 --ELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFR--KWEESIEEYL 282 >gi|255654310|ref|ZP_05399719.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-23m63] gi|296452600|ref|ZP_06894294.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP08] gi|296880988|ref|ZP_06904934.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP07] gi|296258561|gb|EFH05462.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP08] gi|296428009|gb|EFH13910.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP07] Length = 290 Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 117/297 (39%), Positives = 169/297 (56%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSL--------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L SM I+ R D D+ + +F L+ PD Sbjct: 1 MKILITGSNGQLGKELVNQLEAINQSMSQPKYAILATTRNDFDIYNQTNVDNFILNNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V++N AAYT VD ED E A+ +NA G +A A++ + I+ISTDYVF+G S+ P Sbjct: 61 VVVNCAAYTKVDACEDNIETAYKVNALGVRNLAIASEKVNAKLIHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E S T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDSKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + + + II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLTKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNIL 287 E KV I + ++ KA RP YS LD KL ++ R W+E + L Sbjct: 230 --ELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFR--NWEESIEEYL 282 >gi|289662629|ref|ZP_06484210.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668427|ref|ZP_06489502.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 302 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 120/302 (39%), Positives = 161/302 (53%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L D + R G+ PD D P+ ++ Sbjct: 1 MTTLVLGANGQVGTELLRALAVDGPVQATTRSGQLPDGSTCETADFNAPETLSALLDRVR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD AE + E A NA G IA S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDGAEQDRESAVRANATAPGVIAAWCASNRVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAHTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL + I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPAKRPAYSRLSIDKLQSDFGIELPEWRIGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|332532394|ref|ZP_08408274.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas haloplanktis ANT/505] gi|332038261|gb|EGI74707.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas haloplanktis ANT/505] Length = 299 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/299 (37%), Positives = 166/299 (55%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L C +VE+I G ++D+ + ++ SPD++IN AAY Sbjct: 1 MKILVTGKNGQLGSELQKTCPSNVELICFGSKELDISNAEQVNELLITHSPDIVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A+++N GA +A I I+ISTD+VFDG S P TNP Sbjct: 61 TAVDKAETDTDTAYAVNKLGAANLASTCKHINARLIHISTDFVFDGTSTMPYTASDATNP 120 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG SKLAGE+ + + I+RTAWVYS+FG+NF+ +MLRL E+ ++ +V DQ Sbjct: 121 LGVYGASKLAGEQAINEILGSQATIVRTAWVYSVFGNNFVKTMLRLMAEKEQLGIVGDQV 180 Query: 180 GTPTSALQIARAIIQI-----AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 GTPT A +A + + + ++ +T+ I + T D G SW DFA I E A Sbjct: 181 GTPTWAAGLANMLWALVAKASSEQVLNTENTAT--ILNWT-DAGVASWYDFAVAIQ-ELA 236 Query: 235 ERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +K + I YPT A RPA+S L+ ++ ++ W+ ++ +L + Sbjct: 237 IEQGLLTKSIPISAIPAASYPTPAKRPAFSVLNKAQAEEISGVKTVHWRTQLKEMLTEL 295 >gi|325920447|ref|ZP_08182375.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865] gi|325549094|gb|EGD20020.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865] Length = 302 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 121/302 (40%), Positives = 161/302 (53%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R GR PD D P+ + + Sbjct: 1 MTTLVFGANGQVGTELLRALEADGAVQATTRSGRLPDGSACETADFDAPEALPALLDWIA 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE +P+ A NA G IA + +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDPDSAMRANALSPGVIAAWCAAHEVPLVHYSTDYVFDGQGTE 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG +KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGGTKLAGEDAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 236 EEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQREFDIVLPDWQLGLQRVIA 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|270261090|ref|ZP_06189363.1| hypothetical protein SOD_a03150 [Serratia odorifera 4Rx13] gi|270044574|gb|EFA17665.1| hypothetical protein SOD_a03150 [Serratia odorifera 4Rx13] Length = 288 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/294 (39%), Positives = 167/294 (56%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + + ++ +D+ + F PD I+N AAY Sbjct: 1 MRVLLTGAAGQLGRCFIDRLPEGWVLMATDSQQLDITDSSAVSKAVAEFKPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +IN +G G +A AA + IP +++STDYVFDG + P E +P +P Sbjct: 61 TAVDKAESEPERAKAINTDGPGFLAAAAAMLNIPFVHVSTDYVFDGTASEPYCENTPCSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V++RTAWV+S +G+NF+ +MLR+ +R E+ VV DQ+G Sbjct: 121 KSVYGQTKLDGEHAALKANPKTVVIRTAWVFSEYGNNFVKTMLRVGAQRGELGVVSDQYG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A IA A++ + S T + GI+H D VSW DFA+ IF E A+ Sbjct: 181 CPTYAGDIAAAVVAML------SKTQVPCGIYHYCGDSA-VSWFDFAQIIF-EEAQVCTL 232 Query: 240 YS---KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 Y KV I + +YPT A RPAYS L K+ N+R S WK+ ++ +L I Sbjct: 233 YPHQVKVNPIASHEYPTPASRPAYSILSTDKICAL-NLRPSPWKQQLKTVLRKI 285 >gi|288816243|gb|ADC54963.1| RmlD [Escherichia coli] Length = 299 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ + + ++ + V PD D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWEIKRALAPLGNLIALDVHSPDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|293602505|ref|ZP_06684951.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC 43553] gi|292819267|gb|EFF78302.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC 43553] Length = 298 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 108/285 (37%), Positives = 163/285 (57%), Gaps = 11/285 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ Q L + E+I +GR D+DL + PD I+N AAY Sbjct: 1 MKILLLGKDGQVGQELQRTLLPLGEVIALGRHDVDLTDLDALHATLRVHRPDTIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E ++A IN A+A+ ++ I+ STDYVFDG ++ P E P P Sbjct: 61 TAVDKAENEKDLAAQINCRAVSALAQYSNEHNALLIHYSTDYVFDGAAKNPYSETDPVGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG +KLAGE+ + ++ RT+WV+S G NFL ++LRLA+ + ++VV DQFG Sbjct: 121 QSVYGATKLAGEKAIIDSGCKALVFRTSWVFSSHGGNFLKTILRLARTKTSLNVVADQFG 180 Query: 181 TPTSALQIA--RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA IA A+ ++ + ++ G++H+TA G SW +FA YI E++ RG Sbjct: 181 APTSAELIADVSALAICSYRKKQFAE----GLYHLTA-SGTASWHEFARYIVSEASSRGA 235 Query: 239 PYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 ++ I + YPT A RP S L+ SKL+ +++ W Sbjct: 236 ALQLTAERINAIPARDYPTPAKRPQNSRLNTSKLSQALQLQLPHW 280 >gi|119384852|ref|YP_915908.1| dTDP-4-dehydrorhamnose reductase [Paracoccus denitrificans PD1222] gi|119374619|gb|ABL70212.1| dTDP-4-dehydrorhamnose reductase [Paracoccus denitrificans PD1222] Length = 283 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 117/288 (40%), Positives = 163/288 (56%), Gaps = 12/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G +GQ+A L+ + E +GR +L A+ + ++N AAYTAV Sbjct: 5 LVFGRSGQVATELARLAP---EARFLGRDQAELTDAAACAAAIRASGCTAVLNAAAYTAV 61 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE EPE+A +INA+ A+A+ A IG+P ++ISTDYVFDG P E PT PL + Sbjct: 62 DRAESEPELAHAINADAPAAMARTAAEIGVPFLHISTDYVFDGSGERPWSETDPTGPLGV 121 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KLAGE +A+ + ILRT+WV+S G+NFL +MLRL ER E+ VV DQ G PT Sbjct: 122 YGATKLAGERGIAAAGGQWAILRTSWVFSAHGANFLKTMLRLGAEREELRVVADQQGGPT 181 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A + + + +D + GI+H GGP SWA FA I ++ G + Sbjct: 182 PAGDIAAACLAMLGAM--RADAARGGIYHFA--GGPDTSWAGFAREIMAQA----GLSCR 233 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S L+C+ ++ I W+ G+ +L + Sbjct: 234 VTDISTADYPTPARRPVNSRLNCAAISRDFGIGRPDWRAGLAKVLQEL 281 >gi|120555541|ref|YP_959892.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] gi|120325390|gb|ABM19705.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] Length = 295 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 113/295 (38%), Positives = 159/295 (53%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+ L ++I V R D DL K+ A+ +PDV++NPAAY Sbjct: 1 MKILVTGSDGQVGHELLKTLAPLGQVIGVTRKDADLASEKEVAALLARHNPDVVVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + A+++N +A + ++ STDYV+ G E +PT P Sbjct: 61 TAVDKAETEQDAAYALNERAPELMAAWCHAQNRLLVHYSTDYVYPGTGDAAQMETTPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YGKSKLAG+E V +I RT+WVY G NF+L+ML+LA E+ ++VV DQ G Sbjct: 121 ASVYGKSKLAGDEAVLREAPEALIFRTSWVYGARGRNFMLTMLKLAAEKSRLTVVADQVG 180 Query: 181 TPTSALQIARAI-IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A IA+ I + L +D S G+FH+T G SW DFA I + G Sbjct: 181 APTPAWLIAQVTAIAVRERLAGRADIS--GVFHLTCRGA-ASWCDFAREIVARARSAGRT 237 Query: 240 YS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +VY I T YP A RPA S LD S+L + + W+ + L ++ Sbjct: 238 LAMDENQVYPIPTTDYPAPAPRPANSRLDVSRLEQALGLTLPQWQSALSITLADL 292 >gi|331668737|ref|ZP_08369585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271] gi|331063931|gb|EGI35842.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271] Length = 299 Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWAIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|300930357|ref|ZP_07145768.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 187-1] gi|300461757|gb|EFK25250.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 187-1] Length = 299 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 162/294 (55%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPKGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|83582779|ref|YP_425085.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] gi|83578095|gb|ABC24645.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] Length = 310 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 162/296 (54%), Gaps = 9/296 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + ++I GQ+ L++ V ++R R IDL ++ +IN AA Sbjct: 8 RPVLILGTGQVGSELAAAKWPSGLVPVVR-DRKRIDLSNQGSVSAGVADQPWAFVINAAA 66 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE +PE AF++N +G +A+A IP +++STDYVFDG + P E P Sbjct: 67 YTAVDKAETDPEAAFAVNRDGPRWLAEACARAHIPLLHLSTDYVFDGQKQEPYRETDPVA 126 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK AGE + + ++ILRTAWV+S G NF+ +MLRL +ER E+ VV DQ+ Sbjct: 127 PLGVYGASKEAGEAALRAVWERHIILRTAWVFSAHGHNFVKTMLRLGRERDELRVVADQY 186 Query: 180 GTPTSALQIARAIIQIAHNLIEN-----SDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 G PT+A IA +II I L ++ G +H GP +W A+ + A Sbjct: 187 GCPTAASDIATSIIDIVRQLTDDKPRGGGQREGWGTYHFVG-AGPTTWYGLADAVMAGLA 245 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ G V I T QYPT A RP S LDC+++ IR +W+EG+ +L + Sbjct: 246 KQEGRRPVVLPITTAQYPTPARRPVNSVLDCTQIEAVFGIRPRSWREGLDEVLQTL 301 >gi|168481293|gb|ACA24783.1| RmlD [Shigella dysenteriae] Length = 299 Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWAIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLSAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|152974750|ref|YP_001374267.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023502|gb|ABS21272.1| dTDP-4-dehydrorhamnose reductase [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 111/264 (42%), Positives = 154/264 (58%), Gaps = 13/264 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G NGQ+ + L + D E+ +G+ +D+ K +D PD++I+ AA Sbjct: 4 IKVCITGANGQLGKELQEVFTLDKYEVHPLGKDVLDVTKMEDVMRLMQQLQPDIVIHAAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAEDE +AF +NA G IA AA +YISTDYVF G + EF T Sbjct: 64 YTKVDKAEDEQALAFLVNAIGTRNIAVAAQEYNAKLVYISTDYVFSGDQKEGYHEFHATA 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+NIYG SKLAGE+ V S + Y I+RT+W+Y +G NF+ ++LRLA ER EIS+V DQ Sbjct: 124 PINIYGHSKLAGEQFVQSLHHRYFIVRTSWLYGKYGHNFVKTILRLADEREEISIVSDQI 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +AR I ++ +T+L GI+H+ + G SW +FA+ + + Sbjct: 184 GSPTYAGDLARMIEKLV-------ETNLYGIYHV-CNSGSCSWYEFAK----NALQIMRK 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL 263 KV+ I TK Y KA RP YS L Sbjct: 232 DVKVHPITTKDYGAKAKRPQYSIL 255 >gi|197334022|ref|YP_002154930.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11] gi|197315512|gb|ACH64959.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11] Length = 293 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 167/291 (57%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G GQ+ L+ + ++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCYGQVGHCLTEQLADEESTIVLSLDRDQLDITNQDAVNTIVDDFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E ++++ IN +G +A+AA + ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVDLSYVINRDGPSYLAQAAQRVDAAMLHISTDYVFEGNKVGEYQETDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE VA+ + ++ILRTAWV+ G+NF+ +MLRLA R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVANACDKHIILRTAWVFGENGNNFVKTMLRLAATRNALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+IQIA I D G++H + G P VSW +FAE IF + ++ Sbjct: 181 FGGPTYAGDIAHALIQIAKR-ITKGDEVEYGVYHYS--GLPHVSWFEFAEAIFDTAVKQK 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ S L K+ N I+ S W + NI Sbjct: 238 VIPNKPSLTSITTDQYPTPAKRPSNSRLSTDKITNNFGIKASDWMAALNNI 288 >gi|73540419|ref|YP_294939.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] gi|72117832|gb|AAZ60095.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] Length = 304 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 154/293 (52%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ + R DL P PDVI+NPAAYTAV Sbjct: 11 LVTGCNGQVGFELRRSLAPLGNVVALDRSACDLANPDALRRVVRQCRPDVIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + E+AF+INA AG +A+ A ++G ++ S+DYVFDG E NP ++ Sbjct: 71 DKAETDAEVAFAINATAAGILAEEAKALGSLLVHYSSDYVFDGTKDGAYVETDAVNPQSV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGE+ +A+ V+LRT WV G NF +MLRL KER + V+ DQFG PT Sbjct: 131 YGKSKLAGEQAIAATGVQSVVLRTCWVAGAHGGNFAKTMLRLGKERDSLRVIADQFGAPT 190 Query: 184 SALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFA----EYIFWESAERG 237 +A IA QI H L + GI+H+ A G +W +A Y E Sbjct: 191 TASLIADVTAQIVARHWLAGDRQAFANGIYHLAA-AGETTWHGYATEVLRYAKAHGVELK 249 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RP+ S LD ++L T I + WK+GV+ +L I Sbjct: 250 ADPEQIEAIPATAYPLPAPRPSNSRLDTTRLQETFGIHLPDWKQGVQFLLDQI 302 >gi|300717502|ref|YP_003742305.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661] gi|299063338|emb|CAX60458.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661] Length = 295 Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 117/297 (39%), Positives = 170/297 (57%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L +I + R DL + A+ L+ PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGTLIALDRHSTTYCGDLSNAEGIAATILAIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +N A+A AA+ +G ++ STDYVF+G P E Sbjct: 61 AAAHTAVDKAESEPEVAAVLNTSSVAAMAAAAEEVGALLVHYSTDYVFNGQGEQPWTEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YGK+K GEE +A+ +NY+I RT+WVY+ G+NF +ML+LAK+R E+SV+ Sbjct: 121 VTEPLSVYGKTKRDGEEAIAAACSNYLIFRTSWVYAAKGNNFAKTMLKLAKDREELSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A IA AH + + + L GI+H+ A G +W D+A ++ E Sbjct: 181 DQFGAPTGADLIADC---TAHAIRKAKGEPQLSGIYHLIAS-GTTTWHDYASFVITTGRE 236 Query: 236 R--GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +K+ + T +PT A RPA S LD +K + + + W +GV +L I Sbjct: 237 KGLGLKVNKINPVATSAFPTPAKRPANSRLDTAKFQQSFGLTLPDWHDGVERMLTEI 293 >gi|32455999|ref|NP_862001.1| rb126 [Ruegeria sp. PR1b] gi|22726351|gb|AAN05147.1| RB126 [Ruegeria sp. PR1b] Length = 282 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 127/291 (43%), Positives = 162/291 (55%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L++ D ++ +GR DL P A+ + +P +IN AAY Sbjct: 1 MSILVFGATGQVARELAT---HD-GVVCLGRDQADLSDPGACAAAIRAHAPRAVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+A A +G+P + ISTDYVF G P P P Sbjct: 57 TAVDKAEGEEELARIINGAAPGAMAAACVQLGVPLVQISTDYVFAGSGEMPWRPEDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + Y ILRT+WV S G NF+ +MLRL ER ++++V DQ G Sbjct: 117 PNAYGRSKRAGEEAVIAAGGTYAILRTSWVVSCHGHNFVKTMLRLGAERDQLTIVGDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA A I +A LI +D GI+H G P VSWADFA IF ++ G Sbjct: 177 APTPARDIAAACISMAEQLI--ADPGKSGIYHF--QGAPCVSWADFAREIFAQA----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ L I W+ G+R IL ++ Sbjct: 229 SCAVADIPTSDYPTPAARPLNSRLDCALLDTVFGIPQPDWRVGLREILKDL 279 >gi|300770495|ref|ZP_07080374.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] gi|300762971|gb|EFK59788.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] Length = 286 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L + QDVE + R + L + + + PD+II+ A Sbjct: 1 MKILITGANGQLGSELREIYNERQDVETFFLDRKQLPLEQTMLIQNILAMYEPDLIIHAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE EPE+A +IN + IA+ G I ISTDYVFDG S + E S Sbjct: 61 AYTAVDLAESEPELADAINHLASEQIAEYCAIHGTRLIAISTDYVFDGKSAVALSEDSSV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YGK+KL GE+ + + +I+RT+WVYS++G NF+ +M+RL ER EI VV DQ Sbjct: 121 GPISVYGKTKLKGEQIIQRLCPDAIIIRTSWVYSVYGKNFVKTMIRLMTEREEIGVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT+A +A AI+ I ++ GI+H + D G +SW DFA I + Sbjct: 181 IGSPTAAKDLASAIVHII-----DAAKWEGGIYHYSND-GEISWYDFALAI----KDFNR 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T YPT A RP +S LD SK+ + + WK+ +R L+ + Sbjct: 231 LSCNIRAISTNNYPTPAQRPQFSLLDKSKIKRIFGVNVPYWKDSLRQTLMQL 282 >gi|26988515|ref|NP_743940.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] gi|24983282|gb|AAN67404.1|AE016367_4 dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] Length = 300 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 120/301 (39%), Positives = 162/301 (53%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R DL A+ +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGAEGLCGDLSNLDGLAATIRQLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + +A INA +A+ ++G I+ STDYVFDG +E Sbjct: 61 NAAAYTAVDKAESDQALAAMINAAAPAVLARETAALGAWLIHYSTDYVFDGSGSQRWEET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG++KL GE + + V+LRT+WVY+ G NF +MLRLA ER +SVV Sbjct: 121 APTGPLSVYGRTKLEGEHAILASGAKAVVLRTSWVYAARGHNFAKTMLRLAAERETLSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG PT A IA I + D L GI+H+ A G SW FA+++ A Sbjct: 181 ADQFGAPTGADLIADVTAHILRQIFNGQDNRHLAGIYHLAAS-GETSWHGFAQFVL-AHA 238 Query: 235 ERGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +R G KV I T+ YP A RP S L KL NT N ++ W++GV+ +L Sbjct: 239 QRTGVALKVTADKVAAISTEAYPVPAPRPRNSRLALGKLENTFNFKMPLWEQGVQRMLDE 298 Query: 290 I 290 I Sbjct: 299 I 299 >gi|295088037|emb|CBK69560.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 288 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 166/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|288801217|ref|ZP_06406672.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299 str. F0039] gi|288331828|gb|EFC70311.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299 str. F0039] Length = 284 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 110/286 (38%), Positives = 168/286 (58%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+NGQ+ + ++ Q+ + + ++D+ K F +S S D IIN A Sbjct: 1 MRILVTGSNGQLGSEIVALQAQESHHQWFNLDINELDITDKKAIEQFVMSNSIDGIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VDKAE++ E+ + +N + +A+A + +G I+ISTDYVFDG+S P E Sbjct: 61 AYTNVDKAEEDIEVCYKVNRDAPQYLAQAIEKVGGFIIHISTDYVFDGISNIPYTEQDNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ IYGKSK+AGE+ V + +VI+RTAWVYS FG NF+ +M++L KE+ + V+ DQ Sbjct: 121 NPVTIYGKSKIAGEQNVCNSCKRHVIIRTAWVYSSFGKNFVKTMIKLGKEKANLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A+ I I + I + G ++ + + G +SW DF ++I + Sbjct: 181 IGSPTYARDLAKTITTIINQGI------IPGTYNFSNE-GVISWFDFTKHIHQLAKITS- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV I T YPT A RP +S LD +K+ T+NI I W++ + Sbjct: 233 --CKVIPIHTADYPTLAKRPHFSVLDKTKIKKTYNIEIPYWRDSLE 276 >gi|109898446|ref|YP_661701.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas atlantica T6c] gi|109700727|gb|ABG40647.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas atlantica T6c] Length = 286 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 165/293 (56%), Gaps = 10/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + VE+ ++D+ K A F S P+V+IN AA Sbjct: 1 MKVLITGKKGQLGWELCNRAPEPTVEVFAFDSAELDITDAKKVAEIFSSIQPNVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + AF +N EGA IA +G ++ISTD+VFDG +P N Sbjct: 61 YTAVDKAETDEATAFLVNEEGAKNIANGCKEVGARLLHISTDFVFDGTKCSPYIVSDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE + S +I+RTAWVYS G+NF+ +MLRL +E+ ++ +V DQ Sbjct: 121 PLGVYGASKLAGELAIQSMLPEAIIVRTAWVYSSHGNNFVKTMLRLMQEKSQLGIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A + + ++ D ++G++H T D G SW DFA I + E+G Sbjct: 181 GTPTYAAGLADWLWAV----VDKPD--IKGMYHWT-DAGVASWYDFAIAIQELALEKGLL 233 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I+ QYPT A RPA+S +D + ++ W++ + N+L N+ Sbjct: 234 HKAISVQPIYAAQYPTPAKRPAFSVVDKTAAEQDSGVQTVHWRKQLSNMLDNL 286 >gi|194290477|ref|YP_002006384.1| tdp-rhamnose synthetase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] gi|193224312|emb|CAQ70323.1| TDP-rhamnose synthetase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] Length = 303 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/293 (40%), Positives = 161/293 (54%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+NGQ+ L ++ +GR DL +P PDVIINPAAYTAV Sbjct: 10 LITGSNGQVGFELRRSLAPLGRVVALGRAGCDLSRPDQIRRVVRECRPDVIINPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E E+AF+IN AG +A+ A ++G ++ STDYVFDG E P NP ++ Sbjct: 70 DKAETEAELAFAINGTAAGVLAEEAKALGSLLVHYSTDYVFDGSKDGAYVETDPVNPQSV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGEE +A+ + ++LRT WV G NF +ML+L +ER + V+ DQFG PT Sbjct: 130 YGKSKLAGEEAIAAAGGHALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGAPT 189 Query: 184 SALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 +A IA QI H L + T G++H+ A G +W +A + +A +G Sbjct: 190 TASLIADVTAQIVARHWLNGDRRTFASGVYHLAA-AGETTWHAYATEVLRYAAAQGIELK 248 Query: 241 ---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S + I YP A RPA S LD KL T I + W++GV ++L I Sbjct: 249 VDPSHIEAIPATAYPLPAPRPANSRLDTGKLRQTFGIHLPDWQQGVHHLLDQI 301 >gi|93115470|gb|ABE98430.1| dTDP-4-dyhydrorhamnose reductase [Escherichia coli] Length = 299 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 165/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A + G +K+ + T YPT A RP S LD K + + WK GV+ +L Sbjct: 234 ARKAGIALALNKLNAVPTTAYPTPARRPHNSRLDTEKFQQNFALVLPDWKIGVKRML 290 >gi|323948400|gb|EGB44384.1| RmlD substrate binding domain-containing protein [Escherichia coli H120] gi|324119069|gb|EGC12958.1| RmlD substrate binding domain-containing protein [Escherichia coli E1167] Length = 299 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 SAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|126464815|ref|YP_001041791.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides ATCC 17029] gi|126106630|gb|ABN79155.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides ATCC 17029] Length = 283 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 125/288 (43%), Positives = 166/288 (57%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L+ Q + +GR + DL P+ A PD IN AA+TAV Sbjct: 3 LVFGRTGQVARELAR---QAPDARFLGRDEADLADPEACARAIREAKPDAAINAAAWTAV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE+E A +N E GA+A+A ++GIP + ISTDYVFDG P P PL Sbjct: 60 DRAEEEEAPATVVNGEAPGAMARACAALGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGA 119 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G PT Sbjct: 120 YGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A + +A L D L G +H++ GGP VSWADFA IF ++ Sbjct: 180 PAADIAAACLAMARGLAARPD--LSGTYHLS--GGPDVSWADFAREIFRQAEL----DCL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA R W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLARFGLTR-PDWRQGLARVLADL 278 >gi|206561476|ref|YP_002232241.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315] gi|198037518|emb|CAR53455.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315] Length = 307 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 162/291 (55%), Gaps = 9/291 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L +++ R D+D F + +PD++IN AAYTAV Sbjct: 13 LVTGANGQVGWELVRALQPLGKVVAATRSDVDFADAAAVGRFVETVAPDIVINAAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE+EP+ AF++N + A+A+ A + G ++ STDYVFDG + P E PLN+ Sbjct: 73 DRAENEPDAAFAVNRDAVRAMARVAAARGSLLVHFSTDYVFDGSKQAPYSESDDIGPLNV 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGE+ VA ++++ RT+WVY+ G NFL +MLRL R +SVV DQ+G PT Sbjct: 133 YGASKLAGEQAVADIGGDWLVFRTSWVYASRGQNFLRTMLRLGTSREALSVVNDQYGAPT 192 Query: 184 SALQIARAIIQ-IAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 SA IA + IA +L E + T G++HMTA G +W +FAE IF A R P Sbjct: 193 SARTIADLTVHAIAKSLAERRAGTFESGVYHMTAR-GTTTWHEFAEAIF-TGARRVSPQC 250 Query: 241 ----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I +YPTK RP YS LD + + W + + +L Sbjct: 251 DLAIREVTPIPAAEYPTKTPRPTYSVLDNMRFDERFGLYRPQWVDALALVL 301 >gi|168481240|gb|ACA24735.1| RmlD [Escherichia coli] Length = 299 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E + Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAN 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|188578645|ref|YP_001915574.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523097|gb|ACD61042.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 302 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/302 (39%), Positives = 158/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R G+ PD D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYRENAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|84622380|ref|YP_449752.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366320|dbj|BAE67478.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 302 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 118/302 (39%), Positives = 158/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R G+ PD D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYRENAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA Q+ DTS G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIADVTAQLLRQ--RTPDTS--GTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|203285009|gb|ACH97128.1| RmlD [Escherichia coli] Length = 299 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLKAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|299067779|emb|CBJ38989.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CMR15] Length = 305 Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 KLLVTGSNGQVGFELRRSLAPLGEVIALDRSACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKPAAYVETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKARGVE 248 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S +D KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMDTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|281179139|dbj|BAI55469.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli SE15] Length = 299 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 162/294 (55%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGINLALNKLNSVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|56413000|ref|YP_150075.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361928|ref|YP_002141565.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127257|gb|AAV76763.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093405|emb|CAR58860.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 299 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 118/299 (39%), Positives = 168/299 (56%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQ+G PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 235 RKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|192359580|ref|YP_001983890.1| dTDP-4-dehydrorhamnose reductase [Cellvibrio japonicus Ueda107] gi|190685745|gb|ACE83423.1| dTDP-4-dehydrorhamnose reductase [Cellvibrio japonicus Ueda107] Length = 293 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 158/292 (54%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ L + + + V R +D+ + P+++IN AA Sbjct: 1 MKILVTGANGQVGHCLHQQLINNSMSFKAVTRKQLDITDVSAVERSLKEYQPNIVINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + E AF IN +G +A + +IG +ISTDYVF G + P E T+ Sbjct: 61 YTAVDKAESDQENAFRINRDGVANLASVSSAIGAAIFHISTDYVFAGNNDHPYREDDDTS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKLAGE V ++ILRTAWV+ G+NF+ +M+RL + R + +V DQ Sbjct: 121 PQGIYGQSKLAGEIAVIQTNPKHIILRTAWVFGEHGNNFVKTMIRLGRTRDSLGIVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGG 238 G PT A IA A+I+IAH I+ D G +H G P +W +FA IF + E Sbjct: 181 GGPTHAGDIATALIRIAHQYIKTGDLPW-GTYHYA--GMPHTNWYEFARAIF-KQVEAEN 236 Query: 239 PYSK----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 Y K + I T YPT A RPA S LDC+K+ I S W+ + NI Sbjct: 237 LYDKATPSLNAIATADYPTPAKRPANSRLDCTKIQTNFGIAPSDWQAALNNI 288 >gi|312960468|ref|ZP_07774977.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311285353|gb|EFQ63925.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 297 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/294 (36%), Positives = 166/294 (56%), Gaps = 8/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +V G GQ+ + L +I G ++D+ P ++IN AAY Sbjct: 1 MRVIVTGAQGQVGRELLLRAPSGFNVIGYGSGELDISDSVQVEEVLARIKPQLLINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A+++N +G +A+AA + GI ++ISTDYVFDG P T P Sbjct: 61 TAVDKAESDIERAYAVNRDGVAHLARAAQAQGIAVLHISTDYVFDGNHTLPYTPADVTAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGE+++ + + +VILRT+WV+ G+NF+ +MLRL +ER E++VV DQ G Sbjct: 121 SGVYGSSKLAGEQQLQQHCSRHVILRTSWVFGAHGNNFVKTMLRLGRERDELAVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPV-SWADFAEYIFWESAERG- 237 PTSA IA + +A I D L+ G++H + G P +W DFA+ IF ++ Sbjct: 181 CPTSAGSIADTLWALA--TIFRRDGMLKWGVYHYS--GAPACTWYDFADEIFNQARSEAL 236 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + ++PT+A RP +S LDC L + + +WK ++ +L + Sbjct: 237 LEKKPRLKAITSAEFPTQAKRPGWSVLDCQTLEQDYGVSTRSWKVELQQVLQQL 290 >gi|218699368|ref|YP_002406997.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IAI39] gi|253773028|ref|YP_003035859.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162032|ref|YP_003045140.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B str. REL606] gi|297520373|ref|ZP_06938759.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli OP50] gi|306814836|ref|ZP_07448998.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NC101] gi|218369354|emb|CAR17112.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli IAI39] gi|224613065|dbj|BAH24284.1| dTDP-4-dehydrorhamnose reductase subunit [Escherichia coli B] gi|242377692|emb|CAQ32452.1| dTDP-4-dehydrorhamnose reductase, subunit of dTDP-L-rhamnose synthetase [Escherichia coli BL21(DE3)] gi|253324072|gb|ACT28674.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973933|gb|ACT39604.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli B str. REL606] gi|253978127|gb|ACT43797.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BL21(DE3)] gi|305852230|gb|EFM52682.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NC101] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 162/294 (55%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|86144026|ref|ZP_01062364.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella blandensis MED217] gi|85829486|gb|EAQ47950.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella blandensis MED217] Length = 289 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 12/291 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G+NGQ+ Q L + D+ V R + DL + ++ +PD +IN AA Sbjct: 4 RILVTGSNGQLGQELQVLASTYPDMLFDFVTREEFDLEDEEQLLTYLNKTTPDYVINCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE A INA +A + ++ISTDYVFDG S P E + TN Sbjct: 64 YTAVDKAESEPEKATQINAHAVRLLANWSAEHHAKLVHISTDYVFDGSSSIPYTETAVTN 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KL GE+ + +I+RTAWVYS+FG+NF+ +MLRL +ER +++V DQ Sbjct: 124 PQSVYGSTKLEGEQAALASNPEVLIIRTAWVYSVFGNNFVKTMLRLMQERDSLNIVKDQI 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A+AI++I + S GI+H + + G +SW +FA+ I E G Sbjct: 184 GSPTYAADLAQAILKILASAHWES-----GIYHYS-NAGRISWYEFAQAI----KEVAGL 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T YPT A RPAYS L+ K+ + + + +KE + L ++ Sbjct: 234 ACDLDGIPTSAYPTPAKRPAYSLLNTQKIQQVYKVAVPDYKESLTMCLQHL 284 >gi|260856023|ref|YP_003229914.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|24417731|gb|AAN60455.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|56800697|gb|AAW31111.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|77737730|gb|ABB01682.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|257754672|dbj|BAI26174.1| predicted dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|323152430|gb|EFZ38718.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli EPECa14] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWLIHYSTDYVFPGNGDMPWRETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQKFALVLPDWQVGVKRML 290 >gi|293415328|ref|ZP_06657971.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B185] gi|291432976|gb|EFF05955.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B185] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVGSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|168481328|gb|ACA24815.1| RmlD [Escherichia coli] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 163/293 (55%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAS-GTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|308272532|emb|CBX29136.1| hypothetical protein N47_J01170 [uncultured Desulfobacterium sp.] Length = 294 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+ GQ+ + L E I P ID+ D + PD++IN A Sbjct: 1 MKILITGSQGQLGWELLREAKSYGFETIGFDLPQIDITIKPDVEKVINNIRPDIVINAAG 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AEDE E+ F+ N G G IA +++ IP I+ISTDYVFDG TP E + Sbjct: 61 YTNVDRAEDEREVCFAANCTGPGNIAAVCNNLDIPMIHISTDYVFDGRKNTPYTEKDIIS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YGK K G+ V+ ++I+RT+W+Y I +NF+ ++LRL KE+ + VV DQ+ Sbjct: 121 PINAYGKCKAEGDNAVSDVLQKHIIIRTSWLYGIHCNNFVKTILRLGKEKEVLEVVSDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A A++ I+ + I+N+ + GI++ G +W FAE I E G Sbjct: 181 GSPTFVTDLADAVLTISSH-IKNNSGDIWGIYNYCG-AGVTTWHGFAEKII----EEAGK 234 Query: 240 YSKVYRIF-----TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 Y + I +K+YP KA RP+YS LDCS + I W+E ++ Sbjct: 235 YLDIKTILVKPITSKEYPAKAGRPSYSALDCSLINRQFGIVSKPWQESLK 284 >gi|78049262|ref|YP_365437.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037692|emb|CAJ25437.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 273 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/255 (42%), Positives = 143/255 (56%), Gaps = 8/255 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D P+ P ++N AAYTAVD+AE E + AF NAE IA+ G+P Sbjct: 19 DFDAPETLPGLLDRLQPSCVVNAAAYTAVDRAEQERDAAFRANAEAPAVIAQWCARAGVP 78 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 ++ STDYVFDG P T PL +YG+SKLAGE+ V + ++I RTAWVY+ Sbjct: 79 LVHYSTDYVFDGQGTHPYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAH 138 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G NFL +MLR+ ER + VV DQ GTPT A IA AH L + + S G++H+T Sbjct: 139 GHNFLRTMLRVGAERDVLRVVADQIGTPTPAALIADI---TAHALRQPGEPS--GLWHLT 193 Query: 215 ADGGPVSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 A G +W FAE IF ++ RG +V I T YPT A RPAYS LD L +T Sbjct: 194 A-AGQTTWHGFAEAIFAQARARGLLARAPRVEAISTADYPTPATRPAYSRLDIHSLQDTF 252 Query: 273 NIRISTWKEGVRNIL 287 +R+ W++G+ +L Sbjct: 253 GVRLPDWQDGLSQVL 267 >gi|17545402|ref|NP_518804.1| dTDP-4-dehydrorhamnose reductase oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427694|emb|CAD14213.1| probable dtdp-4-dehydrorhamnose reductase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 305 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 KLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTRPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGMAAGVLAEEARALGSLLVHYSTDYVFDGSKAAAYVETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKVRGLE 248 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S +D KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMDTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|113868863|ref|YP_727352.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] gi|113527639|emb|CAJ93984.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] Length = 311 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/298 (39%), Positives = 157/298 (52%), Gaps = 16/298 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+NGQ+ L I+ + R DL P PD I+N AAYTAV Sbjct: 11 LLTGSNGQVGFELRRSLAPLGRIVALDRSACDLADPAQIRRAIRQSRPDAIVNAAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E ++AF+INA +A+ A +G ++ STDYVFDG E P NPL+ Sbjct: 71 DKAETEADLAFAINATAVAVMAEEARRLGTLLVHYSTDYVFDGRKDGLYLETDPVNPLSE 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSK+AGEE + + +ILRT+WV G NF ++L LA+ERRE+ V DQ G PT Sbjct: 131 YGKSKVAGEESILAAGVASLILRTSWVAGAHGKNFATTILGLARERRELRVAADQHGAPT 190 Query: 184 SALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 SA IA QI H L N DT GI+H+ A G +W +A + +A G Sbjct: 191 SASLIADVTAQILARHWLFSNRDTFPAGIYHLAAS-GETTWHAYATEVLRHAASHG---- 245 Query: 242 KVYRI---------FTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V +I + Y A RPA S LD +KL T I + +W+EGVR++L I Sbjct: 246 VVLKIRPEDIQGIPAAEYYSAAAPRPANSRLDTTKLRKTFGIHLPSWEEGVRHLLDQI 303 >gi|16129980|ref|NP_416544.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. MG1655] gi|89108860|ref|AP_002640.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. W3110] gi|170081670|ref|YP_001730990.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. DH10B] gi|238901230|ref|YP_002927026.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BW2952] gi|2507299|sp|P37760|RMLD_ECOLI RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|1736730|dbj|BAA15882.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K12 substr. W3110] gi|1788352|gb|AAC75101.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. MG1655] gi|2665490|gb|AAB88399.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|169889505|gb|ACB03212.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. DH10B] gi|238861012|gb|ACR63010.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BW2952] Length = 299 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 160/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|16588695|gb|AAL26873.1|AF315583_2 dTDP-rhamnose synthetase [Acinetobacter calcoaceticus] Length = 297 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/298 (37%), Positives = 165/298 (55%), Gaps = 12/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R + D+ +P+ + L+ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRHGLNGLSGDMTQPQAISDTILAVQPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE E E+A +N + A+AKA + ++ STDYVFDG+ T E Sbjct: 61 NASAYTAVDLAETERELADVVNHQTVMAVAKACQHVNALFVHYSTDYVFDGVGETAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YGK+K GE+ + Y+I RT+WVY+ G NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNVYGKTKALGEQAIVQSGCQYLIFRTSWVYASKGKNFLKTMLGLAQQREELSII 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G PTSA IA AH + + +D S G +H+ A G SW +A ++F + Sbjct: 181 ADQIGAPTSAELIADV---TAHAIPQTLTDKSKVGTYHLVAS-GETSWFGYASFVFEQVR 236 Query: 235 ERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V I T YPT A RP S L+ K+ +T I + W++GV+ LV + Sbjct: 237 AFGQALTIQNVNAIPTSAYPTPATRPHNSRLNNQKIQHTFGILLPNWQDGVKRALVEL 294 >gi|332525496|ref|ZP_08401654.1| dTDP-4-dehydrorhamnose reductase [Rubrivivax benzoatilyticus JA2] gi|332108763|gb|EGJ09987.1| dTDP-4-dehydrorhamnose reductase [Rubrivivax benzoatilyticus JA2] Length = 299 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 165/297 (55%), Gaps = 12/297 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +++G GQ+ L ++ + R D +P+ + + PDVI+N AA Sbjct: 1 MKLMLLGCGGQLGWELQRALAPLGTLVALDRDTGADFSRPETLPALLDTHRPDVIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD+AE EPE+A +INAE G +A+ A + G ++ STDYVFDG E +PT Sbjct: 61 HTAVDRAESEPELARTINAEAPGLLAREAAARGAWLVHYSTDYVFDGSGTHARAEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG++KL GEE+V + ++ILRT+WVY+ G+NF +ML+LA ER ++ VV DQ Sbjct: 121 PLSVYGRTKLEGEEQVRASGCRHLILRTSWVYAARGANFAKTMLKLAAEREKLRVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A AH L + T SL G +H A GG SW +A + E A G Sbjct: 181 GAPTGADLLADV---SAHALRQAMATPSLAGTYHCVA-GGETSWHGYARLVV-EHARAAG 235 Query: 239 PYSKVY-----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + T YPT A RP S LD S L + + W++GVR +L I Sbjct: 236 HTLRITPDAIEPVPTSDYPTPARRPLNSRLDTSALRERFGLHLPPWQDGVRRMLDEI 292 >gi|171319431|ref|ZP_02908537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171095360|gb|EDT40339.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 307 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 162/292 (55%), Gaps = 9/292 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R ++DL P F PD+++N AAYTA Sbjct: 12 ILVTGANGQVGWELVRALQPLGRVVAATRRNVDLQDPVAVGLFIEKVEPDIVVNAAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AED+ AF++N + ++A AA + G I+ STDYVFDG +TP E +PLN Sbjct: 72 VDRAEDDVVTAFAVNRDAVASLASAAAARGSLLIHFSTDYVFDGSKQTPYSESDGVHPLN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE+ +A ++++ RT+WVY G NFL +MLRL R +SVV DQ+G P Sbjct: 132 VYGASKLAGEQAIADIGGDWLVFRTSWVYGARGQNFLRTMLRLGASREVLSVVNDQYGAP 191 Query: 183 TSALQIARAIIQ-IAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TSA IA IA L E + T GI+HMTA G +W FAE IF + A P Sbjct: 192 TSARTIADLTAHAIAKALAERQAGTFESGIYHMTAR-GMTTWHAFAEAIF-DGARHLSPQ 249 Query: 241 S-----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S +V I +YPTK RPAYS LD ++ +R W++ + +L Sbjct: 250 SELAIRQVNPIPAAEYPTKTPRPAYSVLDNARFDARFRLRRPEWRDALALVL 301 >gi|320352682|ref|YP_004194021.1| dTDP-4-dehydrorhamnose reductase [Desulfobulbus propionicus DSM 2032] gi|320121184|gb|ADW16730.1| dTDP-4-dehydrorhamnose reductase [Desulfobulbus propionicus DSM 2032] Length = 295 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 8/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + V + D DL + S S PD+I++PAAY Sbjct: 1 MRILLTGKNGQVGFELQRALAPLGTLTAVDQTDCDLTDQQAIRSLVRSIQPDIIVHPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++A +IN G + + A IG ++ TDYV DG + E P NP Sbjct: 61 TAVDRAEAESDLAMAINGTAPGILGEEAARIGALVVHYCTDYVHDGTKQGFHTENDPPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKLAG + + TN ++I RT WV+ G+NF+ +ML+LA ER ++VV DQFG Sbjct: 121 RNVYGASKLAGTKSLCQKTNKHLIFRTCWVFGAHGANFVKTMLKLAGERETLNVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q+ + G++H+ A G +W +FA+ + S G Sbjct: 181 APTSASLIADITAQVIGQYQRTEEKHFPFGLYHLAA-AGVTTWHEFAQTVVAASLRAGMG 239 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S + I T QYP A RPA S L KL +T ++ + W++G+ ++L I Sbjct: 240 LKLTPQS-IRPITTAQYPLPARRPANSRLATDKLRDTFSLHLPPWQDGLSHVLQQI 294 >gi|218460817|ref|ZP_03500908.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli Kim 5] Length = 206 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 111/200 (55%), Positives = 141/200 (70%), Gaps = 1/200 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPARIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNL 199 G PTSAL IA AI+ IA + Sbjct: 181 GCPTSALDIADAILAIATRI 200 >gi|33637051|gb|AAQ23688.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 286 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 110/287 (38%), Positives = 164/287 (57%), Gaps = 13/287 (4%) Query: 2 KCLVIGNNGQI-AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ A+ + + + E+ GR ++D+ + S P+V+I+ AAY Sbjct: 5 KILVTGAKGQLGAEMVKLLKDMEYEVYGYGRAELDITDFQQVKSVIDHIHPNVVIHAAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE EP+ AF +NA G + A++ IG +YISTDYVFDG + P +EF+ T+P Sbjct: 65 TNVDAAESEPDQAFFVNAYGTRNVVVASEHIGAKFVYISTDYVFDGTANAPYNEFAFTSP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKLAGE+ V + + I+RT+WVY G+NF+ +ML+LA+E++E+ VV DQ G Sbjct: 125 ISVYGKSKLAGEQFVRDLHSKFFIIRTSWVYGKHGNNFVKTMLKLAQEQKELFVVDDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I Q+ H T G++H++ + G SW +FA+ IF E Sbjct: 185 CPTYTVDLASCIFQLIH-------TEKYGVYHIS-NSGHCSWYEFAKAIF----EEANVN 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V TK YP A RP YS LD L + W+E ++ + Sbjct: 233 IVVNPCKTKDYPRPAQRPLYSVLDHMALRLNGFKELRHWREALKEFI 279 >gi|91211324|ref|YP_541310.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UTI89] gi|300986907|ref|ZP_07177885.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1] gi|91072898|gb|ABE07779.1| dTDP-4-dehydrorhamnose reductase, subunit of dTDP-L-rhamnose synthetase [Escherichia coli UTI89] gi|288816224|gb|ADC54946.1| RmlD [Escherichia coli] gi|294490643|gb|ADE89399.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IHE3034] gi|300407836|gb|EFJ91374.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1] gi|307626416|gb|ADN70720.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UM146] gi|315295250|gb|EFU54585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 153-1] Length = 299 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTVYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|260173433|ref|ZP_05759845.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 286 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 164/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YSIFG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSIFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCL 279 >gi|323968174|gb|EGB63583.1| RmlD substrate binding domain-containing protein [Escherichia coli M863] gi|327253172|gb|EGE64826.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli STEC_7v] Length = 299 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGSWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|63054927|gb|AAY29004.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia] Length = 299 Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 156/302 (51%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------DLLKPKDFASFFLSFS 50 M L+ G NGQ+ Q L I+ R D P + Sbjct: 1 MTVLLFGANGQVGQELLRSLAPLGSIVATTRSGTLANGVPCEVADFDNPGSLVALLDRVH 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD ++N AAYTAVD+AE + E A+ NAE G IA+ + G+P ++ STDYVFDG Sbjct: 61 PDTVVNAAAYTAVDRAEQDREAAWRTNAESPGVIARWCAAAGVPLVHFSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG+SKLAGE + ++I RTAWVY+ +NFL +MLR+ ER Sbjct: 121 PYRESDPTGPLGVYGESKLAGEIAIREAGGRHLIFRTAWVYAPHSANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A A+I L L G +H+TA G SW FAE IF Sbjct: 181 LLRVVADQVGTPTPA-----ALIADVTALALQHPGQLSGTWHLTAT-GEASWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + RG +V I T YPT A RPAYS LD ++L + I + TW++G+ ++ Sbjct: 235 AAAVARGVLPRAPRVEAITTADYPTPARRPAYSHLDVTRLQSDFGIDLPTWQDGLAQVMA 294 Query: 289 NI 290 + Sbjct: 295 QL 296 >gi|21230099|ref|NP_636016.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769910|ref|YP_244672.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. 8004] gi|21111626|gb|AAM39940.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575242|gb|AAY50652.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. 8004] Length = 302 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/304 (38%), Positives = 157/304 (51%), Gaps = 21/304 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R GR PD D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDQIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD+AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDRAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ILRTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLILRTAWVYASHGGNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA I L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIA----DITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E+ G P +V I T YPT A RPAYS L KL +I + W+ G++ + Sbjct: 236 EEAVSAGLLPRAP--RVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRV 293 Query: 287 LVNI 290 + + Sbjct: 294 IAEV 297 >gi|237713729|ref|ZP_04544210.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409365|ref|ZP_06085908.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|293371466|ref|ZP_06617889.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|298482894|ref|ZP_07001076.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] gi|229446176|gb|EEO51967.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352817|gb|EEZ01914.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|292633569|gb|EFF52129.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|298270866|gb|EFI12445.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] Length = 288 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 170/292 (58%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTAHTPYTEDCNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YSIFG+NF+ +MLRL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSIFGNNFVKTMLRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYAIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|126726123|ref|ZP_01741965.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2150] gi|126705327|gb|EBA04418.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2150] Length = 285 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 157/288 (54%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ++Q L+ + II +GR DL P A +IN AAY Sbjct: 1 MSILVFGTTGQVSQELAR---RREGIIALGRDQADLSDPAACAKLITETDCHAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + +A +N A+A A + GIP ++ISTDYVFDG P T P Sbjct: 58 TAVDKAESDEAMAALVNGAAPTAMATACAAKGIPFVHISTDYVFDGTGDQPWMVNDLTAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++KL GEE V + Y ILRT+WV+S G+NF+ +M RL ER +++V DQ G Sbjct: 118 LGAYGRTKLTGEEGVRAAGGTYGILRTSWVFSAHGNNFVKTMRRLGAERDRLTIVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT+A IA A + +A L+ +S S G +H GGP VSWADFA IF +S Sbjct: 178 GPTAAGDIADACLAMADQLLADSGKS--GTYHFA--GGPDVSWADFAREIFAQS----NL 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +PT A RPA S +DCS L I W+ + +++ Sbjct: 230 TPEVVDIPTSDFPTPAARPANSRMDCSTLETVFGITRLDWRVSLADVI 277 >gi|73809578|gb|AAZ85704.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] Length = 299 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 162/293 (55%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|323525017|ref|YP_004227170.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] gi|323382019|gb|ADX54110.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] Length = 308 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 157/292 (53%), Gaps = 10/292 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L+ ++ V R +DL + P +I+NPAAYTAV Sbjct: 11 LVTGVNGQVGYELARTLQGLGRVVAVDRSTLDLSNLDQIRAVVRDVKPALIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE EPE+A IN E G +A+ A +G I+ STDYVFDG + E PTNP N Sbjct: 71 DKAEQEPELAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFDGEKQDAYVESDPTNPQNA 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KLAGE +A+ ++++LRT+WVY G NFLL+MLRL +R E+ VV DQFG PT Sbjct: 131 YGRTKLAGERAIAATGVDHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAPT 190 Query: 184 SALQIARAIIQIAHNLIENSDTS-----LRGIFHM-TADGGPVSWADFAEYIFWESAERG 237 IA IA D + G++H+ AD SW FA IF E A+ Sbjct: 191 WCNTIATLTAHIAAQSFAAPDANSWWQERSGVYHLCCADS--TSWHGFASAIF-ELADLP 247 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 S + I +YPT A RP+ S + +KLA + W+E +R L + Sbjct: 248 NRPSTL-PIPAAEYPTPAKRPSNSRMSNAKLAQVFGLAAPHWREALRLCLTD 298 >gi|113867832|ref|YP_726321.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] gi|113526608|emb|CAJ92953.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] Length = 305 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 156/293 (53%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G+NGQ+ L ++ + R DL P + + PDVI+NP AYTAV Sbjct: 12 LVTGSNGQVGFELRRSLAPLGRVVALDRTGCDLSCPDEIRRMVREYRPDVIVNPGAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE EP++AF+IN AG +A+ A ++G ++ STDYVFDG E NPL++ Sbjct: 72 DEAETEPDLAFAINGTAAGILAEEAKALGSLLVHYSTDYVFDGTKNGTYIETDLVNPLSV 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGE+ + + +ILRT W G NF +MLRL +ER + V+ DQFG PT Sbjct: 132 YGKSKLAGEQAITATGAQSLILRTCWAAGAHGGNFAKTMLRLGRERESLRVIADQFGAPT 191 Query: 184 SALQIARAIIQIAHN--LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 +A IA QI L + + G++H+ A G +W +A + +A G Sbjct: 192 TATLIADVTAQIVGRRWLCGDRMSFPSGLYHLAA-AGETTWHAYATEVLRYAAAHGIELK 250 Query: 242 K----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I YP A RPA S LD SKL T +I + W++GV +L I Sbjct: 251 VDPGCIEPIPATAYPLPAPRPANSRLDTSKLRQTFDIHLPDWQQGVHFLLDQI 303 >gi|9957865|gb|AAG09538.1|AF279625_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 169/299 (56%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ ++ V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIVLDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGSWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQ+G PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 235 RKAGITLALTELNAVPTSAYPTSASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|16761028|ref|NP_456645.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141276|ref|NP_804618.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213419658|ref|ZP_03352724.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425546|ref|ZP_03358296.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213650450|ref|ZP_03380503.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289827041|ref|ZP_06545849.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25291468|pir||AE0767 dTDP-4-dehydrorhamnose reductase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503326|emb|CAD02459.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136902|gb|AAO68467.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 299 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 167/297 (56%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT A +A AH + + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADC---TAHAIRVTLNKPEVAGLYHLVA-GGTTTWHDYAALVFDEARK 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 237 AGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|260435295|ref|ZP_05789265.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8109] gi|260413169|gb|EEX06465.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8109] Length = 294 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 155/292 (53%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + + +E++ R +DL + PD ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIASAPEGIELVATSRQQLDLADTEACRGAVQEHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++NA A A+A D G + ISTD+VF+G TP NP Sbjct: 61 TAVDKAESEPELAHAVNAGAPEAFARALDQQGGRLLQISTDFVFNGTQGTPYQPEQARNP 120 Query: 121 LNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGE V + +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEAAVQTIFGAGGRGLILRTSWVIGPVGRNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A Q L D L + H + D G SW D A + A+ G Sbjct: 181 QVGCPTSTLNLAQACWQ---TLRIAGDRELPAVMHWS-DAGASSWYDVAVAVGQIGADLG 236 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T YPT A RPAYS LDC+ ++ W++ ++N+L Sbjct: 237 LIDTPAAVQPITTADYPTPAERPAYSLLDCTSTRAALDLNGEHWQQALKNVL 288 >gi|82777432|ref|YP_403781.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae Sd197] gi|81241580|gb|ABB62290.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella dysenteriae Sd197] Length = 299 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRL KER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLGKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAT-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|220935511|ref|YP_002514410.1| dTDP-4-dehydrorhamnose reductase [Thioalkalivibrio sp. HL-EbGR7] gi|219996821|gb|ACL73423.1| dTDP-4-dehydrorhamnose reductase [Thioalkalivibrio sp. HL-EbGR7] Length = 298 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 11/282 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ +L + + VE++ + R +D+ F P +IN AAYT Sbjct: 14 RVLLSGAAGQVGVALRDLMPEGVELLALERSTLDISDADRVTETVAHFRPHWVINAAAYT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++AF+IN +GA +A+AA S+ ++ISTDYVFDG P NP+ Sbjct: 74 AVDKAEHEPDLAFAINRDGAANLARAAQSVRARMVHISTDYVFDGRKSCPYTPDDLPNPI 133 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SKLAGE +N +ILRTAWVY+ G NFL +MLRL +ER E+ VV DQ G Sbjct: 134 NVYGESKLAGEIATRDILGDNLLILRTAWVYAPHGRNFLTTMLRLLQERDELRVVEDQVG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A I++ + L G +H T D G SW DFA I + G Sbjct: 194 TPTHAASLAEVILR-------SISQDLTGTYHWT-DAGVASWYDFAIAIQEMAISTGLDV 245 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + +V I T+ YPT A RPAY+ LD S + + W+ Sbjct: 246 ATCRVSPIPTRDYPTPASRPAYTVLDKSAIRERLGHHGTHWR 287 >gi|167903952|ref|ZP_02491157.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei NCTC 13177] Length = 298 Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 153/289 (52%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L+ ++ + R +DL P + P +I+NPAAYT Sbjct: 8 RILVTGVNGQVGFELARTLQGLGTVVALDRGALDLADPDRIRAVMREIRPTLIVNPAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++A +IN G +A+ A +G P I+ STDYVFDG+ E PT P Sbjct: 68 AVDKAERERDLAIAINGVAPGVLAEEAKRLGAPLIHYSTDYVFDGMKDGEYTETDPTCPQ 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE +A+ ++I RT+WVY G NF+L+MLRL ER E+ VV DQ G Sbjct: 128 NVYGESKLAGEVAIAASGAAHLIFRTSWVYGARGRNFMLTMLRLGNERSELKVVSDQIGA 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL-----RGIFHMTADGGPVSWADFAEYIFWESAER 236 PT + IA + D + G++H++A G SW FA IF E Sbjct: 188 PTWSNTIATLTSHVVAQANSVQDVTQWWSERSGVYHLSASGA-TSWHGFASAIF----EL 242 Query: 237 GGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G ++ V I T +YP A RPA S + KL +R WKE + Sbjct: 243 AGGETRPIVLPISTAEYPVPATRPANSRMSGDKLQEVFGLRAPDWKEAL 291 >gi|217421054|ref|ZP_03452559.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 576] gi|217396466|gb|EEC36483.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 576] Length = 300 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 153/289 (52%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L+ ++ + R +DL P + P +I+NPAAYT Sbjct: 10 RILVTGVNGQVGFELARTLQGLGTVVALDRGALDLADPDRIRAVMREIRPTLIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++A +IN G +A+ A +G P I+ STDYVFDG+ E PT P Sbjct: 70 AVDKAERERDLAIAINGVAPGVLAEEAKRLGAPLIHYSTDYVFDGMKDGEYTETDPTCPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE +A+ ++I RT+WVY G NF+L+MLRL ER E+ VV DQ G Sbjct: 130 NVYGESKLAGEVAIAASGAAHLIFRTSWVYGARGRNFMLTMLRLGNERSELKVVSDQIGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL-----RGIFHMTADGGPVSWADFAEYIFWESAER 236 PT + IA + D + G++H++A G SW FA IF E Sbjct: 190 PTWSNTIATLTSHVVAQANSVQDVTQWWSERSGVYHLSASGA-TSWHGFASAIF----EL 244 Query: 237 GGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G ++ V I T +YP A RPA S + KL +R WKE + Sbjct: 245 AGGETRPIVLPISTAEYPVPATRPANSRMSGDKLQEVFGLRAPDWKEAL 293 >gi|78213550|ref|YP_382329.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9605] gi|78198009|gb|ABB35774.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9605] Length = 294 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 154/292 (52%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + +E++ R ++DL P+ PD ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIACAPDGIELVVTSRQELDLADPEACGGAVKQHKPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++NA A A+A D G + ISTD+VF+G P +P Sbjct: 61 TAVDKAESEPELAHAVNAGAPEAFARALDQQGGRLLQISTDFVFNGTQGKPYQPEQARDP 120 Query: 121 LNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGE V S +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEAAVQSIFGARGQGLILRTSWVIGPVGKNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A Q L D L + H + D G SW D A + A+ G Sbjct: 181 QVGCPTSTLNLAQACWQ---TLQIAGDRELPAVMHWS-DAGAASWYDVAVAVGQIGADLG 236 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T YPT A RPAYS LDC+ ++ W++ ++ +L Sbjct: 237 LIDTPAAVQPITTADYPTPAERPAYSLLDCTSTRAALDLNGEHWQQAIKTVL 288 >gi|51246074|ref|YP_065958.1| dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54] gi|50877111|emb|CAG36951.1| probable dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54] Length = 298 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 169/293 (57%), Gaps = 10/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ GQ+ + L VE++ R ++D+ K F PD+IIN Y Sbjct: 1 MRILVTGSGGQVGKCLCRQLSGKVELLTTNRSELDITCQKAVLKTVTGFQPDIIINATGY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSR-TPIDEFSPT 118 TAVD AE+ E A+ +N +GA + +AA ++G ++ISTDYVF G SR E Sbjct: 61 TAVDLAEENSEEAYRVNQDGAKFLGQAATAVGAALLHISTDYVFSGEKSRDESYSEGEEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YGKSKLAGE+ VA+ ++ILRT+WV+S +G NF+ +M+ L ++ +S+V DQ Sbjct: 121 GPLGVYGKSKLAGEKAVANTCKRHIILRTSWVFSEYGRNFVKTMIALGQKHDSLSIVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT A IA A+I IA I + + G++H G P ++W+ FA+ IF E AER Sbjct: 181 YGGPTYAGDIASALITIAEK-ISDENFCQWGLYHFA--GQPFMNWSGFAKVIFSE-AERE 236 Query: 238 G--PYSKVY-RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V + ++QYP+ A RP S LD SKL I S W++ +R I+ Sbjct: 237 NLLPAEPVINNVSSEQYPSLAKRPGNSQLDTSKLTAQFGISPSDWQQALREII 289 >gi|88813325|ref|ZP_01128563.1| dTDP-4-dehydrorhamnose reductase [Nitrococcus mobilis Nb-231] gi|88789383|gb|EAR20512.1| dTDP-4-dehydrorhamnose reductase [Nitrococcus mobilis Nb-231] Length = 291 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 161/292 (55%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ ++L + VE++ GR +D+ +P+ L+ P VI+N AAY Sbjct: 1 MKVLVTGANGQLGRALVRLAPAGVELLAYGRDALDVTQPQSVPRV-LAMEPAVIVNAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E A+++N GA +A+AA +G ++ISTD+VFDG P S NP Sbjct: 60 TAVDQAETERAAAYAVNVGGAEHMARAARELGCRLVHISTDFVFDGAQGRPYTPESKPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKLAGE+ + + +ILRTAW+Y GSNF+ SMLRL + R E+ VV DQ G Sbjct: 120 LNVYGASKLAGEQAAQAIKPDALILRTAWLYGETGSNFVHSMLRLMRTRAELHVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 TPT+ +A+ + + + L GI H T D G SW DFA I + G Sbjct: 180 TPTAVAGLAQCVWRAIEGRL------LSGIQHWT-DAGVASWYDFAVAIRQTAMALGLLQ 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + YPT A RPA+S LD + + W + + L + Sbjct: 233 RPAAVLPVPSSAYPTPASRPAFSVLDKTATWRALALTPGHWSAALADTLAAV 284 >gi|309787872|ref|ZP_07682482.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae 1617] gi|50982493|gb|AAT91847.1| dTDP-4-dyhydrorhamnose reductase [Shigella dysenteriae] gi|308924271|gb|EFP69768.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae 1617] Length = 299 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRL KER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLGKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVNKPE-----VAGLYHLVAT-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|63033902|gb|AAY28253.1| RmlD [Escherichia coli] Length = 299 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G G + L + ++ + V D D P A S PD+I+N Sbjct: 1 MNILLFGKTGHVGWELQRALAPLGNLIALDVHSTDYCGDFSNPDGVAETIRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFSGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 TTAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P S K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLSLNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|187880657|gb|ACD37159.1| RmlD [Escherichia coli] gi|187880666|gb|ACD37167.1| RmlD [Escherichia coli] gi|187880675|gb|ACD37175.1| RmlD [Escherichia coli] Length = 299 Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 166/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A GG +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAANKPE-----VAGLYHLVA-GGTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A R G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARRAGINLALNKLNAVPTTAYPTPARRPYNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|224826610|ref|ZP_03699711.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] gi|224601211|gb|EEG07393.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] Length = 297 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 160/294 (54%), Gaps = 6/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG +GQ+ L ++ GR +DL +P A L F+PD+I+N AAY Sbjct: 1 MRILLIGGSGQLGFELRRSLALYGKLWAPGREVLDLSRPDQLAPPVLEFAPDLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A +NAE +A+ A+ +G ++ STDYVFDG P E T P Sbjct: 61 TAVDRAETEPALAERVNAEAPAELARLAERLGATLLHFSTDYVFDGAGAAPYREGDVTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG++K GE V + + + +LRT+WVY G NF+ ++LRLA +R ++VV DQ G Sbjct: 121 LSVYGRTKRDGELAVMNDCSRHYVLRTSWVYGSVGGNFVKTILRLAAQRDTLNVVHDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA+ IA Q+ L E G++H+TA G SW FA I + + GG Sbjct: 181 APTSAMLIADVSAQLVSRLREGRVLPY-GLYHLTA-AGETSWHGFAREIVGLAQDVGGGL 238 Query: 241 ----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I YP A RPA S LD KL I + W+ ++ +L + Sbjct: 239 VLKPEAIQAIPAADYPAAAERPANSRLDTHKLRVALGIVLPDWRHHLQLVLQQL 292 >gi|190572702|ref|YP_001970547.1| putative dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia K279a] gi|190010624|emb|CAQ44233.1| putative dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia K279a] Length = 301 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/304 (38%), Positives = 162/304 (53%), Gaps = 22/304 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q L +++ R PD D +P+ + Sbjct: 1 MTVLVFGGNGQVGQELLRALAPLGKVVATTRSGTLPDGSACETADFGQPESLPALLDRLR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD+AE E + AF+ NA+ G IA+ + G+P ++ STDYVFDG Sbjct: 61 PSIVVNAAAYTAVDRAEQEVDAAFAANAQAPGVIARWCAAHGVPFVHYSTDYVFDGQGTV 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG SK GE+ V + ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYHEDEPTAPLGVYGTSKRDGEDAVRAAGGRHLIFRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ VV DQ GTPT A IA Q + L G +H+TA G SW FAE IF Sbjct: 181 QLRVVADQVGTPTPAALIADVTAQALQH-----PGQLSGTWHLTAS-GQTSWHGFAEAIF 234 Query: 231 WESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 ES G P V I + +YPT A RPA+S LD KL I + W++G++ + Sbjct: 235 AESLAAGVLVKAP--SVEAIPSSEYPTPAKRPAWSVLDNRKLQQDFGIVLPVWQDGLKRV 292 Query: 287 LVNI 290 + + Sbjct: 293 IGEV 296 >gi|331658120|ref|ZP_08359082.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA206] gi|331056368|gb|EGI28377.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA206] Length = 299 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 165/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A GG +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAANKPE-----VAGLYHLVA-GGTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A R G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARRAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|153808463|ref|ZP_01961131.1| hypothetical protein BACCAC_02757 [Bacteroides caccae ATCC 43185] gi|149128785|gb|EDM20002.1| hypothetical protein BACCAC_02757 [Bacteroides caccae ATCC 43185] Length = 282 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 164/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G +GQ+ + + ++ + ++D+ + ++ ++I+N A Sbjct: 1 MRILVTGADGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+A+ +N E A +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDNPELAYKLNCEAAKELASAAQFNGAAMIQVSTDYVFDGTAHIPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLKRCI 279 >gi|254459903|ref|ZP_05073319.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2083] gi|206676492|gb|EDZ40979.1| dTDP-4-dehydrorhamnose reductase [Rhodobacteraceae bacterium HTCC2083] Length = 284 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 128/291 (43%), Positives = 170/291 (58%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G GQ+AQ L Q E I +GR D DL P A + D++IN AA Sbjct: 1 MRVLIFGKTGQVAQEL-----QRFEGITALGREDADLNDPAACAEIIANTDADIVINAAA 55 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + AF +NA+ A+A+AA +P ++ISTDYVFDG TP E PT Sbjct: 56 YTAVDAAETDTDKAFVVNADAPKAMAEAAAKRAMPFLHISTDYVFDGTGTTPWREDDPTA 115 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL IYG SKLAGE V + ++ ILRT+WV S G+NF+ +MLRL ER +++V DQ Sbjct: 116 PLGIYGSSKLAGEHGVRAVGGSHAILRTSWVVSAHGTNFVRTMLRLGTERDALNIVADQI 175 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A++ +A LI++ TS G +H A SWADFA IF ++ G Sbjct: 176 GGPTCARDIAAALMHMARKLIDDPSTS--GTYHF-ASTPDTSWADFAREIFTQA----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+K+A NI W+ G+ +IL ++ Sbjct: 229 SCDVTDIPSSAYPTPAARPKNSRLDCTKIATVFNINRPDWRIGLADILSDL 279 >gi|255099386|ref|ZP_05328363.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-63q42] gi|255305244|ref|ZP_05349416.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile ATCC 43255] Length = 290 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSL--------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L S+ I+ R D+D+ + +F L PD Sbjct: 1 MKILITGSNGQLGKELVNQLEAINQSINQPKYVILATTRSDLDISNQTNVDNFILHNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V++N AAYT VD ED EIA+ INA G +A A++ + I+ISTDYVF+G S+ P Sbjct: 61 VVVNCAAYTKVDACEDNIEIAYKINALGVRNLAIASEKVNAKLIHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + +A+ II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLAKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNIL 287 + KV I + ++ KA RP YS LD KL ++ R W+E + L Sbjct: 230 --KLKNIDIKVNPIKSNEFKCKAPRPLYSVLDNFMLKLIGLNSFR--KWEESIEEYL 282 >gi|269102101|ref|ZP_06154798.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161999|gb|EEZ40495.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 167/288 (57%), Gaps = 10/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L + EI+ V R ++D+ D F P +IIN A Sbjct: 1 MKVLITGCNGQVGSCLVEQLQTFPNTEILAVDRNELDITSQYDVIKSVNEFKPHIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E +++++IN +G +A+AA+++G ++ISTDYVF G E Sbjct: 61 AHTAVDKAETEVDLSYAINRDGPLYLAQAAENVGATLLHISTDYVFSGDKDGMYIETDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YGKSKLAGE V + +ILRTAWV+ G+NF+ +MLRLA++R E+ +V DQ Sbjct: 121 DPQGVYGKSKLAGENAVLDNCSRSIILRTAWVFGEEGNNFVKTMLRLAQQRDELGIVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLI---ENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESA 234 FG PT A IA A+I IA +I N + S GI+H + G P SW FA+ IF ++ Sbjct: 181 FGGPTYARDIATALISIARTIIAEGSNFELSKYGIYHYS--GLPHTSWYGFAQTIFDKAV 238 Query: 235 ERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 E+ V I T+ Y T A RPA S L+ K+ T +I+ S W+ Sbjct: 239 EQKVLNKAPIVNGIKTEDYLTPAKRPANSKLNIQKITETFDIQASDWQ 286 >gi|115503046|gb|ABI98970.1| RmlD [Escherichia coli] gi|187880503|gb|ACD37021.1| RmlD [Shigella boydii] Length = 299 Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVGETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 CKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|73809590|gb|AAZ85715.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] Length = 299 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAT-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|168818215|ref|ZP_02830215.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345064|gb|EDZ31828.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086528|emb|CBY96299.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 299 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 117/299 (39%), Positives = 167/299 (55%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 235 RKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|327399837|ref|YP_004340706.1| dTDP-4-dehydrorhamnose reductase [Hippea maritima DSM 10411] gi|327182466|gb|AEA34647.1| dTDP-4-dehydrorhamnose reductase [Hippea maritima DSM 10411] Length = 292 Score = 195 bits (496), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 116/294 (39%), Positives = 163/294 (55%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 M LV G NGQ+ + + ++ + + +D+ K ++ F D+ Sbjct: 1 MNVLVTGANGQLGSEIKYLVKNNLTSNIKHLTFFFTDKDKLDITKKEEIEKFVKEKDIDL 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AAYTAVDKAE+E E++ IN + +A + I I+ISTDYVFDG + P Sbjct: 61 IINCAAYTAVDKAEEEKELSDLINHQAVKYLANISKENDITLIHISTDYVFDGKNYKPYK 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E TNP IYG +KL GEE + +I+RT+WVYS FG NF+ +MLRL K+R E++ Sbjct: 121 EDYKTNPQGIYGLTKLKGEEAFINSGARGIIIRTSWVYSTFGHNFVKTMLRL-KDRSELN 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPT A +A+AI++I E + IFH + + G SW DFA+ IF Sbjct: 180 VVFDQVGTPTYARDLAKAILEIIDKNYEKLNNFKAEIFHFSNE-GICSWYDFAKAIF--- 235 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + K+ I TK YPT A RP YS L+ +K+ NI I W+E ++ +L Sbjct: 236 -DIKSIDIKINPIETKDYPTPAKRPYYSVLNKNKIKKEFNIEIPYWRESLKKML 288 >gi|9957830|gb|AAG09510.1|AF279618_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 166/296 (56%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + + W+ GV+ +L + Sbjct: 238 GLTLALTELNAVPTSAYPTPASRPGNSRLNTEKFQSNFGLILPQWELGVKRMLTEM 293 >gi|307340769|gb|ADN43832.1| RmlD [Escherichia coli] Length = 299 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 165/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A + G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARKAGILLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|159046646|ref|YP_001542315.1| dTDP-4-dehydrorhamnose reductase [Dinoroseobacter shibae DFL 12] gi|157914405|gb|ABV95834.1| dTDP-4-dehydrorhamnose reductase [Dinoroseobacter shibae DFL 12] Length = 285 Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 124/288 (43%), Positives = 162/288 (56%), Gaps = 12/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L++ E + +GR DL P A+ + +P +IN AAYTAV Sbjct: 3 LVFGQTGQVARELAARVP---EALFLGRDAADLSDPDACAAALRAAAPSAVINAAAYTAV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE E ++A IN GA+A AA +G+P ++ISTDYVFDG P +P PL Sbjct: 60 DRAEAEEDLATRINGAAPGAMAVAAAELGVPFVHISTDYVFDGAGTAPFAPDAPVGPLGA 119 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE V + + ILRT+WV S G NF+ +MLRL ER +S+V DQ G PT Sbjct: 120 YGRSKLAGEEAVRAVGGVHAILRTSWVVSAHGGNFVKTMLRLGAERDSLSIVADQVGGPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 +A IA A ++IA L +D G +H G P VSWADFA IF ++ G Sbjct: 180 AAGDIAAACLKIAARLA--ADPGKSGTYHFA--GAPDVSWADFAREIFGQA----GLDCA 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W E + IL ++ Sbjct: 232 VTDIPSAAYPTPARRPHNSRLDCSSLQAAFGIARPDWAESLSGILRDL 279 >gi|168481392|gb|ACA24874.1| RmlD [Escherichia coli] Length = 299 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|93115447|gb|ABE98409.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] gi|203285021|gb|ACH97139.1| RmlD [Escherichia coli] Length = 299 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLKAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|160886448|ref|ZP_02067451.1| hypothetical protein BACOVA_04459 [Bacteroides ovatus ATCC 8483] gi|156108333|gb|EDO10078.1| hypothetical protein BACOVA_04459 [Bacteroides ovatus ATCC 8483] Length = 286 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 112/289 (38%), Positives = 163/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCL 279 >gi|325497858|gb|EGC95717.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia fergusonii ECD227] Length = 299 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYATLVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|91215487|ref|ZP_01252458.1| dTDP-4-dehydrorhamnose reductase [Psychroflexus torquis ATCC 700755] gi|91186439|gb|EAS72811.1| dTDP-4-dehydrorhamnose reductase [Psychroflexus torquis ATCC 700755] Length = 283 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 160/294 (54%), Gaps = 16/294 (5%) Query: 1 MKCLVIGNNGQIAQSLS----SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 MK LV G+NGQ+ Q L S+ + D + + +DL + + +F PD +N Sbjct: 1 MKILVTGSNGQLGQCLQKHAKSLTLFDFKFETL--ESLDLTQEETLNLYFEKHRPDFCVN 58 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYT V+ AED AF +NAE +AK + I+ISTDYVFDGL P E Sbjct: 59 CAAYTNVEGAEDNENSAFQVNAEAVHKLAKLCEKFKTKLIHISTDYVFDGLKNRPYHESD 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 NP+N+YG SK GE + S N Y +LRT+W+YS FG NF ++L+ A + +++ Sbjct: 119 KENPINVYGASKFQGETHITSTMNTYFMLRTSWLYSEFGHNFFNTILKKAASQHPLNITT 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 +Q GTPT+A +A+ I+ + +D++ G++H ++ G +W DFA I E Sbjct: 179 EQIGTPTNANDLAKFILHLIQ-----TDSTDYGLYHY-SNKGEATWYDFARLIL----EE 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ T YPTKA RP +S LD SK+ +T I I W+E + N+L + Sbjct: 229 KNLDQEISLQATFSYPTKAKRPKFSVLDKSKVLSTFAIGIPHWRESLVNLLKEV 282 >gi|22298494|ref|NP_681741.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus BP-1] gi|22294674|dbj|BAC08503.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus BP-1] Length = 304 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 11/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIIN 56 M+ L++G GQ+ L VE+I V R +DL + + PDV+IN Sbjct: 8 MRLLILGATGQVGWQLVQQAPPRVEVIPVARQGTAVTLDLEDLDAISPLLKTLRPDVVIN 67 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE E E A IN+ G +A +G I+ STDYVF G P E Sbjct: 68 AAAYTAVDQAEQETERAQRINSTAVGLLAATMAELGGLLIHYSTDYVFAGNQSLPYRETD 127 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN YG +K GE+ +A + ++ILRT+WVY + G NFL +M+RLA+ R + VV Sbjct: 128 APAPLNAYGYTKWLGEQAIARHHPAHLILRTSWVYDLRGKNFLRTMVRLAQTRPLVRVVA 187 Query: 177 DQFGTPTSALQIARAIIQIAHNLIEN--SDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ GTPT+A IA Q+ + L+E+ + SL G++H+T G SW FA IF Sbjct: 188 DQIGTPTAAPFIA----QVTYQLLEHWQATPSLSGLYHLTPRGS-TSWYGFAAKIFDHLR 242 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +G + + I + +YPT+A RPA+S L+C KL + W+ + +L + Sbjct: 243 AKGYAAATLEAIPSSEYPTRAKRPAFSTLNCEKLETVLGTPLPPWEAVLEPLLQQL 298 >gi|117624236|ref|YP_853149.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli APEC O1] gi|237704494|ref|ZP_04534975.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia sp. 3_2_53FAA] gi|300936656|ref|ZP_07151560.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 21-1] gi|115513360|gb|ABJ01435.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli APEC O1] gi|226900860|gb|EEH87119.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia sp. 3_2_53FAA] gi|288816199|gb|ADC54923.1| RmlD [Escherichia coli] gi|300458237|gb|EFK21730.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 21-1] gi|323951792|gb|EGB47666.1| RmlD substrate binding domain-containing protein [Escherichia coli H252] Length = 299 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 161/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLEMD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARNA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|191167706|ref|ZP_03029514.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B7A] gi|76366003|gb|ABA42228.1| RmlD [Escherichia coli] gi|190902219|gb|EDV61960.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B7A] Length = 299 Score = 195 bits (495), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNCDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWYDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQLGVKRML 290 >gi|46451852|gb|AAS98027.1| RmlD [Shigella boydii] Length = 299 Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 164/294 (55%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A +A AH + + T + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADC---TAHAIRVALKKTEVAGLYHLVAS-GTTTWYDYAALVFEEARK 236 Query: 236 RGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGIPLVLNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|82543418|ref|YP_407365.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii Sb227] gi|16611724|gb|AAL27311.1|AF402312_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] gi|81244829|gb|ABB65537.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii Sb227] gi|167410110|gb|ABZ79714.1| RmlD [Escherichia coli] gi|332097187|gb|EGJ02170.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii 3594-74] Length = 299 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 164/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D + A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNSEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S LD K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLDTEKFQQNFALVLPDWQIGVKRML 290 >gi|212550650|ref|YP_002308967.1| dTDP-4-dehydrorhamnose reductase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548888|dbj|BAG83556.1| dTDP-4-dehydrorhamnose reductase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 293 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 163/291 (56%), Gaps = 10/291 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G GQ+ L+ + Q E I +DL K+ F D IIN AAYT Sbjct: 6 LVTGAKGQLGCELTKVFTQHSEFNFIPTDIDTLDLTNKKEVIHFVKKHKIDYIINCAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+E ++ + IN + I +AA I+IST+YVFDG+ TP E TNP Sbjct: 66 AVDKAEEEIDLCYLINRDAVKNIVEAAARGKAKIIHISTNYVFDGVKNTPYIETDITNPQ 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKL GE + +I+RT+W+YSI+G NF+ +LRL KE+ EI+VVCDQ GT Sbjct: 126 SVYGKSKLEGENTLMKNCPESIIIRTSWLYSIYGYNFVKKILRLIKEKSEINVVCDQIGT 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A I+ + ++ + GIFH ++ G VSW DFA+ I S + Sbjct: 186 PTFAPDLANTILVLI-TFLKKTKNFHSGIFHY-SNEGIVSWFDFAKKILQLSETKN---C 240 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR---NILVN 289 K+ I T+QYP +A RP YS L+ K+ +I I W+ ++ N+L N Sbjct: 241 KIRPITTEQYPIRAKRPFYSALNKKKIKKAFDIVIPNWEVSLKKCINLLTN 291 >gi|300692302|ref|YP_003753297.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum PSI07] gi|299079362|emb|CBJ52034.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum PSI07] Length = 305 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 110/295 (37%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKAGAYVESDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKARGLE 248 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S ++ +KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMNTAKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|114321465|ref|YP_743148.1| dTDP-4-dehydrorhamnose reductase [Alkalilimnicola ehrlichii MLHE-1] gi|114227859|gb|ABI57658.1| dTDP-4-dehydrorhamnose reductase [Alkalilimnicola ehrlichii MLHE-1] Length = 306 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 155/299 (51%), Gaps = 12/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 M+ L+ G NGQ+ L E+I +GR + DL A S PD+I+ Sbjct: 1 MRTLLFGPNGQVGWELRRSLAPLGELIPLGRHEWQGLRGDLTDKDAIAHAIRSLRPDLIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVD+AE EPE A INA G +A+ A I+ STDYVFDG P E Sbjct: 61 NAAAYTAVDQAESEPEQARLINATAPGVMAELAREQQALFIHYSTDYVFDGSGDRPWHED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT PLN+YG++K GEE V + +++I RTAWVY+ G NF+ +M+RLA +R + V+ Sbjct: 121 DPTAPLNVYGQTKREGEEAVRAADGHHLIFRTAWVYAARGHNFIRTMIRLACQRDTLQVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA A D LRG +H+TA G +W +A ++ ++ Sbjct: 181 NDQHGAPTGAELIADVTAHAARTASTRPD--LRGTYHLTA-AGETTWHGYARFVIEQARA 237 Query: 236 RGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + + T +PT A RP S LD KL T ++ W+ GV L + Sbjct: 238 GGAPVRVAPEAIEAVATDAFPTVARRPHNSRLDGHKLETTFGLKRPDWRSGVARALQEM 296 >gi|16611767|gb|AAL27348.1|AF402315_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] Length = 299 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 162/293 (55%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF+ +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFVKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T Y T A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKLNAVPTTAYTTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|332883225|gb|EGK03508.1| dTDP-4-dehydrorhamnose reductase [Dysgonomonas mossii DSM 22836] Length = 317 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 164/289 (56%), Gaps = 13/289 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-----VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 LV G+NGQ+ + + R V DI L+ DF F + IIN A Sbjct: 31 LVTGSNGQLGNEIRRISANHENNFRFFFTDVAELDITDLRSVDF--FIKENNIKYIINCA 88 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ ++ + IN + + +AA + I+ISTDYV+DG + P E Sbjct: 89 AYTAVDKAEDDVDLCYKINRDAVANLGQAATNNKAKVIHISTDYVYDGTANKPYVETDTV 148 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP ++YGKSK GE ++ + +ILRTAW+YSIFG+NF+ +M++L KER ++VV DQ Sbjct: 149 NPQSVYGKSKQEGEAELLKACADSIILRTAWLYSIFGNNFVKTMIKLGKERETLNVVADQ 208 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+ +A+ I++I ++ GI+H + +G +W DF I E+ G Sbjct: 209 RGTPTNGTDLAKTIVKILD--FSEANGFKPGIYHYSNEGA-TTWYDFTLAIHKEA---GI 262 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T+QYP KA RP YS LD +K+ +T N+ I W+E + N + Sbjct: 263 NTCKVNPITTEQYPVKATRPKYSVLDKTKIKSTFNLTIPKWEESLNNCI 311 >gi|115503059|gb|ABI98982.1| RmlD [Escherichia coli] Length = 300 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|16765426|ref|NP_461041.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991011|ref|ZP_02572110.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242169|ref|ZP_02667101.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448060|ref|YP_002046146.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264888|ref|ZP_03164962.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|132498|sp|P26392|RMLD_SALTY RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|21730455|pdb|1KBZ|A Chain A, Crystal Structure Of Apo-Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) From Salmonella Enterica Serovar Typhimurium gi|21730457|pdb|1KC1|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadph gi|21730458|pdb|1KC3|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadph And Dtdp-L-Rhamnose gi|24987882|pdb|1N2S|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadh gi|47890|emb|CAA40116.1| dTDP-6-deoxy-L-mannose dehydrogenase [Salmonella enterica] gi|16420628|gb|AAL21000.1| TDP-rhamnose synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406364|gb|ACF66583.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197243143|gb|EDY25763.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330551|gb|EDZ17315.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338312|gb|EDZ25076.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247311|emb|CBG25136.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994150|gb|ACY89035.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158657|emb|CBW18169.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913087|dbj|BAJ37061.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224744|gb|EFX49807.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130419|gb|ADX17849.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989031|gb|AEF08014.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 299 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 168/299 (56%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQ+G PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 235 RKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|170019634|ref|YP_001724588.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ATCC 8739] gi|169754562|gb|ACA77261.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ATCC 8739] Length = 299 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 167/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S + ++ + V D D P+ + PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVSETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E + Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAN 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|78223675|ref|YP_385422.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15] gi|78194930|gb|ABB32697.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15] Length = 280 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/284 (39%), Positives = 159/284 (55%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G G + Q L + DV + + +ID+ P+ L+ P V++N AAYT V Sbjct: 3 LVVGAKGMLGQDLMRVLPGDVRGVDI--EEIDITSPESVRRVLLTLKPRVVVNCAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E ++A +N +G G +A A IG + +STDYVFDG TP E NPL++ Sbjct: 61 DGCETNVDLAMRVNGDGVGHLAAATREIGALLVQVSTDYVFDGTKGTPYVEDDRVNPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKL GE+K A +++I+RT W+Y G NF+ +MLRLA ER EI+VV DQ G+PT Sbjct: 121 YGKSKLVGEKK-ARENPDHLIVRTQWLYGHGGKNFVETMLRLAGERTEIAVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 ++ AI + LIEN + RG +H A+ G SW +FA IF E+ G V Sbjct: 180 WTADLSLAITE----LIEN---NCRGTYH-AANRGTCSWYEFARAIFAEA----GVGMTV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 T++ A RP YS LDC KL + + + W+E ++N L Sbjct: 228 RPQSTEELGRPAPRPLYSVLDCDKLTHDAGLELEDWREALKNYL 271 >gi|149277565|ref|ZP_01883706.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149231798|gb|EDM37176.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 288 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 110/286 (38%), Positives = 170/286 (59%), Gaps = 15/286 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR----VGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G GQ+ Q L+ + Q+ +I + + + D+L + F +P+ +IN Sbjct: 3 RILVFGGKGQLGQCLAKVA-QERNMIEMFLFLSQEEGDILDEISLSLLFHRENPEYVINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE+E ++ IN G+ +AK I I+ISTD+VF+G ++E SP Sbjct: 62 AAYTAVDQAENERDLCELINKTGSINLAKYCQEIKATLIHISTDFVFEGNIPHLLNEESP 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP+N+YG++KL GE +A N ++I+RT+W+YS G+NF+ +M RLA ER E+ V+ D Sbjct: 122 TNPINVYGRTKLDGELGIARLLNEHIIIRTSWLYSEIGNNFMKTMKRLASERTELGVIVD 181 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A+ +A II I + G++H + + G SW DFA+ IF S + Sbjct: 182 QAGTPTYAIDLANTIIDIV-----KLNHHKYGVYHYSNE-GVASWYDFAKAIFDISQIK- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 K+ I+T YPTKA RP YS +D +K+ +T ++I W++ + Sbjct: 235 ---IKLNPIYTSAYPTKAKRPMYSVMDKTKIKSTFELQIPYWRDSL 277 >gi|226943710|ref|YP_002798783.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] gi|226718637|gb|ACO77808.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L++G NGQ+ L + +EI R D+D +P+ A+ P VI+N A Sbjct: 1 MKILLLGANGQVGWELQRALAPLGRLEICDRLRADLD--RPESLAALVERIQPQVIVNAA 58 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + + +NAE +A AA S ++ STDYVFDG E P Sbjct: 59 AYTAVDKAESDAARSRRVNAESVEVLADAARSCDAWLVHYSTDYVFDGCKAAAYTEDDPV 118 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YG++KL GE+ + + ++ILRT+WVY+ GSNF+ +MLRLA ER E+ V+ DQ Sbjct: 119 GPLSVYGQTKLEGEQAIQASGCKHLILRTSWVYAARGSNFIKTMLRLAAEREELRVIADQ 178 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAE- 235 G PTSA IA + + L + + + G++H+TA G SW +A ++ ++A Sbjct: 179 IGAPTSAELIADVSALLLYRLRHDRALAEQATGVYHLTA-AGETSWHGYARFVVAKAAAL 237 Query: 236 ----RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + GP ++ I T YP A RPA S LD KL T ++ + W+ V +L Sbjct: 238 DMSLKAGP-DDIHAIGTADYPLPARRPANSRLDTGKLRRTFDLHLPQWEYHVERML 292 >gi|288559365|ref|YP_003422851.1| dTDP-4-dehydrorhamnose reductase RfbD [Methanobrevibacter ruminantium M1] gi|288542075|gb|ADC45959.1| dTDP-4-dehydrorhamnose reductase RfbD [Methanobrevibacter ruminantium M1] Length = 286 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 162/283 (57%), Gaps = 13/283 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G G + L + +++ ++I G D+D+ + F P+++IN AAY Sbjct: 1 MRILITGAYGMLGSDLREV-LKNHDLIATGSKDLDITDEERCIDFIAKERPEIVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD E + A+++NA G +A A + I IP ++ISTDYVFDG RTP+ E P Sbjct: 60 TAVDDCETHYDDAYAVNALGPRNLAIACNKIDIPLVHISTDYVFDGTKRTPLIENDKLGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGK+KLAGEE + T Y ILRTAW+Y I G NF+ +ML LAKE EI+VV DQ G Sbjct: 120 QSAYGKTKLAGEEFIQENTQKYFILRTAWLYGIHGGNFVKTMLDLAKEHDEITVVNDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +L +A AI ++ D+ GI+H+T D G SW DFA+ IF S Sbjct: 180 SPTFSLDLAMAICEVL-------DSDKYGIYHLTND-GECSWYDFAKEIFRISDID---- 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV + T+++P A RP YS L K + + + +KE + Sbjct: 228 VKVIPVSTEEFPRPAPRPHYSVLSNVKWKSAGFVPMRDYKEAL 270 >gi|168481339|gb|ACA24825.1| RmlD [Escherichia coli] gi|320198730|gb|EFW73330.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli EC4100B] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|24113425|ref|NP_707935.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 301] gi|30063491|ref|NP_837662.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 2457T] gi|110806009|ref|YP_689529.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 5 str. 8401] gi|27735226|sp|P37778|RMLD_SHIFL RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|294897|gb|AAA53680.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella flexneri] gi|24052448|gb|AAN43642.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str. 301] gi|30041744|gb|AAP17471.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str. 2457T] gi|110615557|gb|ABF04224.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 5 str. 8401] gi|281601493|gb|ADA74477.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2002017] gi|313649923|gb|EFS14343.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 2457T] gi|332756673|gb|EGJ87022.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-671] gi|332756856|gb|EGJ87201.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2747-71] gi|332766385|gb|EGJ96594.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2930-71] gi|333002465|gb|EGK22027.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-218] gi|333002552|gb|EGK22113.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri VA-6] gi|333017170|gb|EGK36491.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-304] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 165/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A GG +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAANKPE-----VAGLYHLVA-GGTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A R G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARRAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|186477067|ref|YP_001858537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] gi|184193526|gb|ACC71491.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] Length = 297 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 115/288 (39%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ I+ R ++DL + P +I+NPAAYTAV Sbjct: 10 LLTGVNGQVGFELARSLQGLGTIVAPRRDELDLSDLEQVRRVVREVKPVLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + A INAE +A+ A +G ++ STDYVFDG E NP+N+ Sbjct: 70 DKAETDVDAAMRINAEAPSVLAEEAKRLGAALVHYSTDYVFDGTKDGAYVESDAVNPINV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE+ +A+ ++I RT+WVY G NFLL+MLRL ER E+SVV DQFG PT Sbjct: 130 YGRSKLEGEQAIAAVGGAHMIFRTSWVYGTRGKNFLLTMLRLGAEREELSVVADQFGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDT-------SLRGIFHMTADGGPVSWADFAEYIFWESAER 236 + IA AH L + + T G++H+TA GG SW FAE IF S+ + Sbjct: 190 WSNTIA---TSTAHVLAQATATDGEQWWREHSGVYHLTA-GGVTSWYGFAEAIFEFSSLQ 245 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P V I YPT A RP S + KLA +R W+E ++ Sbjct: 246 KKP--AVKPIPASAYPTPASRPTNSSMSNDKLAAAFGVRAPDWREALQ 291 >gi|62955958|gb|AAY23334.1| RmlD [Shigella boydii] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|324114027|gb|EGC08000.1| RmlD substrate binding domain-containing protein [Escherichia fergusonii B253] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 118/299 (39%), Positives = 166/299 (55%), Gaps = 21/299 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-------DLLKPKDFASFFLSFSPDV 53 M L+ G GQ+ L +I + DI D P+ A PDV Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIAL---DIHSTEYCGDFSNPEGVAETVKKIRPDV 57 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+N AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP Sbjct: 58 IVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGDTPWL 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++ Sbjct: 118 ETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELA 177 Query: 174 VVCDQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V+ DQFG PT A +A I++A N E + G++H+ A G +W D+A +F Sbjct: 178 VINDQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVF 231 Query: 231 WESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E+ + G P + K+ + T YPT A RP S L+ K + + + W+ GV+ +L Sbjct: 232 EEARKAGIPLALNKLNAVPTIAYPTPACRPHNSRLNTEKFQHNFALVLPDWQVGVKRML 290 >gi|9957821|gb|AAG09503.1|AF279616_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLTALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|158423456|ref|YP_001524748.1| dTDP-4-dehydrorhamnose reductase [Azorhizobium caulinodans ORS 571] gi|158330345|dbj|BAF87830.1| dTDP-4-dehydrorhamnose reductase [Azorhizobium caulinodans ORS 571] Length = 297 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 112/282 (39%), Positives = 165/282 (58%), Gaps = 4/282 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G +GQ+ + L+++ V+ + + + R D+ P A + PDV++N AA Sbjct: 1 MRVLLLGADGQLGRELTALAVERGLALAALNRAATDITDPVAVAKALEAHKPDVVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A +NA G IA+ S G+P I++STDYVFDG E P Sbjct: 61 YTAVDKAESEPDLAAKVNAVAPGLIAERCASAGVPLIHVSTDYVFDGTKTGAYVESDPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AGE + + ++ILRTAWVY I+G+NFL +MLRLAK+R +++V DQ Sbjct: 121 PLGVYGRTKAAGEAAIRAAGEKHLILRTAWVYGIYGNNFLKTMLRLAKDRDRLTIVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+ IA I+ A + S + G +H+ G +W FA+ I +A G Sbjct: 181 GCPTATRDIAEGILAAAAPAVAGS--ARWGTYHLGGT-GVTTWHGFAQAIIDRAATYTGR 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V I T +YPT A RPA S LD S T + R + W++ Sbjct: 238 RPEVAAITTAEYPTPARRPANSELDSSLFERTFHFRAAPWQQ 279 >gi|319638377|ref|ZP_07993139.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa C102] gi|317400126|gb|EFV80785.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa C102] Length = 287 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDHLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNASAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + +I+RT+W++S +GSNF+ +MLRLAKER +SVV DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESIIIRTSWLFSEYGSNFVKTMLRLAKERDSLSVVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AII++ TS RGIFH + +W +F + IF + + + Sbjct: 181 CPTYAGDLAHAIIELLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAQQLDDSF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTDQYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREILRKI 286 >gi|187730759|ref|YP_001879839.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii CDC 3083-94] gi|187427751|gb|ACD07025.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii CDC 3083-94] Length = 299 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 161/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S P++I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPEIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMF 290 >gi|114326769|ref|YP_743926.1| dTDP-4-dehydrorhamnose reductase [Granulibacter bethesdensis CGDNIH1] gi|114314943|gb|ABI61003.1| dTDP-4-dehydrorhamnose reductase [Granulibacter bethesdensis CGDNIH1] Length = 301 Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 114/278 (41%), Positives = 159/278 (57%), Gaps = 2/278 (0%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G +GQ+A +L + V + RVGRP+ D +P + F SP +++N AAYTA Sbjct: 8 LVTGGSGQVALALEEAAKARGVSVRRVGRPEFDFDRPDSIETVFREVSPSLVVNAAAYTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + A N +G +A+ GIP I+ISTDYVFDG P E PTNP Sbjct: 68 VDAAESDVAAAERANRDGPARLAELCAVAGIPLIHISTDYVFDGSKGAPYVETDPTNPTG 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KLAGE+ V + ++LRTAWV S G NF+ +ML A++ + VV DQ G P Sbjct: 128 VYGRTKLAGEDAVLATCRQAIVLRTAWVVSHTGKNFVKTMLNAARKTDTLRVVADQQGNP 187 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TSA +A AI+ IA L + + + G H A G +W AE +F ++A+ G P Sbjct: 188 TSAADLAEAILDIAKKLEKGWNDTYFGPTH-AAGTGATTWHGLAEAVFEQAAKHGAPRPA 246 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V+ I T +PT A RPA S LDC++L +R+ W+ Sbjct: 247 VHPIKTSDWPTPARRPADSRLDCTRLETVFGVRMPDWQ 284 >gi|299149344|ref|ZP_07042401.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] gi|298512531|gb|EFI36423.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] Length = 286 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 169/292 (57%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTAHTPYTEDCNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YSIFG+NF+ +MLRL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSIFGNNFVKTMLRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYAIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ + I Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCIDKI 282 >gi|313500047|gb|ADR61413.1| DTDP-4-dehydrorhamnose reductase [Pseudomonas putida BIRD-1] Length = 301 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 114/299 (38%), Positives = 161/299 (53%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI---DLLKPKDFASFFLSFSPDVIIN 56 MK L++G +GQ+ L +++ + R DL A ++PDVI+N Sbjct: 1 MKVLLLGKDGQVGWELQRSLAPLGQLLALNARSQAYCGDLANLPGLAETVRVYAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE + E AF +NA+ G +A+AA G ++ STDYVF G P E Sbjct: 61 AAAYTAVDKAESDREQAFKVNADAVGVLARAAAECGALLVHYSTDYVFPGQGTQPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN YG SKLAGE+ + + ++I RT WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 AVDPLNTYGASKLAGEQAIQAAGCQHLIFRTCWVYAARGNNFAKTMLRLAAERDSLGVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA AH ++ + SL G++H+ A+ G +W +A Y+ ++A Sbjct: 181 DQHGAPTGAELIADI---TAHAIVATRRNPSLAGLYHLAAE-GETTWCGYARYVLEQAAV 236 Query: 236 RGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V + T+ YPT A RPA S LD KL + + W+ GV +L I Sbjct: 237 HGVPLKAHAENVTPLTTEAYPTAAMRPANSRLDTHKLQKAFALTLPDWRLGVARMLTEI 295 >gi|302880021|ref|YP_003848585.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] gi|302582810|gb|ADL56821.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] Length = 295 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G NGQ+ L E++ +G + + F+PDVI+N AA+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAPLGEVLALGSDRCNFTDMDGLTNTVRQFAPDVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A +INA G +A A +G I+ STDYVFDG P E PT P Sbjct: 61 TAVDRAESEPELARTINALAPGVLAAEAKRLGAWLIHYSTDYVFDGSGNKPWMETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKL GE +A + I RT+WVY G NF +MLRLA+ER + V+ DQ G Sbjct: 121 LSVYGASKLEGERLIAESGCRHFIFRTSWVYGARGGNFAKTMLRLAQERDSMKVIDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A + N D + G++H+ A GG SW +A ++ + + G P Sbjct: 181 APTGAELLADVSAHAIRTSLVNPDVA--GLYHLVA-GGETSWHGYANFVIDFARQAGVPI 237 Query: 241 S----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +PT A RP S L KL + + + W+ GV +L + Sbjct: 238 KVMPDAIEAVPTSAFPTAATRPHNSRLSTGKLTSAFGLHLPHWQVGVTRMLTEV 291 >gi|167032393|ref|YP_001667624.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] gi|166858881|gb|ABY97288.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] Length = 301 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/299 (37%), Positives = 162/299 (54%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI---DLLKPKDFASFFLSFSPDVIIN 56 MK L++G +GQ+ L +++ + R DL A +F+PDVI+N Sbjct: 1 MKVLLLGRDGQVGWELQRSLAPLGQVLALNARSQAHCGDLANLHGLAETVRAFAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE + E+AF +NAE +A+AA G ++ STDYVF G P E Sbjct: 61 AAAYTAVDKAESDRELAFRVNAEAVDVLARAAADCGALLVHYSTDYVFPGQGTQPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN YG SKLAGE+ + + +++ RT WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 AVGPLNTYGASKLAGEQAILAAGCQHLVFRTCWVYAARGNNFAKTMLRLAAERDSLGVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA AH + + + +L G++H+ A GG +W +A Y+ ++A Sbjct: 181 DQHGAPTGAELIADI---TAHAITASRRNPALAGLYHLAA-GGETTWCGYARYVLAQAAA 236 Query: 236 RG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + T+ YPT A RPA S LD +KL + + W+ GV +L I Sbjct: 237 HGVRLKTHAEQVKPLTTEAYPTPAKRPANSRLDTNKLQKAFALTLPDWRLGVARMLTEI 295 >gi|327482468|gb|AEA85778.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 336 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L ++ R DL +P + PDVI+N AAY Sbjct: 8 MSILLLGANGQVGWELQRALAPLGNLLACDRRRADLTRPDQLERLVEAQQPDVIVNAAAY 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A INAE G +A+AA G ++ STDY+FDG + E T P Sbjct: 68 TAVDRAESEPQQAHLINAEAVGVLAQAAQRCGALLVHYSTDYIFDGNAIGMQAEDRQTAP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +KL GE + + +++ILRT WVY+ G NF ++LRLA ER E+ +V DQ G Sbjct: 128 LNVYGCTKLEGERLIRASGCHHLILRTCWVYASRGHNFAKTILRLASEREELRIVADQIG 187 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA IA + + + + R G +H+ A GG SW ++A YI +AE G Sbjct: 188 APTSAELIADITAIMLLRMANDPGLAQRAYGTYHLAA-GGHTSWHEYACYIVRTAAELGM 246 Query: 239 PY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + S++ + + ++ T A RP S LD S+L T + + W R +L + Sbjct: 247 QFRTDPSRILAVKSGEFVTAAARPRNSLLDTSRLQETFGLTLPHWTTHARRMLQEV 302 >gi|329902105|ref|ZP_08273032.1| dTDP-4-dehydrorhamnose reductase [Oxalobacteraceae bacterium IMCC9480] gi|327548871|gb|EGF33498.1| dTDP-4-dehydrorhamnose reductase [Oxalobacteraceae bacterium IMCC9480] Length = 296 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 111/299 (37%), Positives = 161/299 (53%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E+I V D A + +PD+I+N Sbjct: 1 MKILLLGKGGQVGWELQRSLAPLGELIAVDFDSTDYCGDFTNLSGLADTIRAIAPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +INA +A+ A +G ++ STDYVFDG P S Sbjct: 61 AAAHTAVDKAESEPELARTINALAPAILAQEAQRLGAWLVHYSTDYVFDGSGTAPWTVTS 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT PL++YG++KL GEE + + ++I RT+WVY+ G NF +MLRLAKER ++V+ Sbjct: 121 PTGPLSVYGQTKLEGEEAIGASGCKHLIFRTSWVYAARGGNFARTMLRLAKERDRLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A ++ D S G++H+ A GG SW +A ++ + A + Sbjct: 181 DQIGAPTGADLLADVTAHAIRTALQRPDVS--GLYHLVA-GGQTSWHGYASFVV-DFARQ 236 Query: 237 GGPYSKVYR-----IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV + + T +PT A RP S L+ KL T ++ + W+ GV +L I Sbjct: 237 AGVDIKVAQEAILPVATSAFPTPATRPNNSLLNTEKLQQTFSLTLPHWQTGVARLLTEI 295 >gi|168236254|ref|ZP_02661312.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734178|ref|YP_002115185.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709680|gb|ACF88901.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290512|gb|EDY29867.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 167/299 (55%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQ+G PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 235 RKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|213585954|ref|ZP_03367780.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 291 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 165/293 (56%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT A +A AH + + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADC---TAHAIRVTLNKPEVAGLYHLVA-GGTTTWHDYAALVFDEARK 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G +++ + T YPT A RP S L+ K + + W+ GV+ + Sbjct: 237 AGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRM 289 >gi|9957840|gb|AAG09518.1|AF279620_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 166/296 (56%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A+RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTSANRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|161613224|ref|YP_001587189.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551042|ref|ZP_02344797.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|198242562|ref|YP_002216183.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353239|ref|YP_002227040.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857532|ref|YP_002244183.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362588|gb|ABX66356.1| hypothetical protein SPAB_00934 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197937078|gb|ACH74411.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273020|emb|CAR37968.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324048|gb|EDZ11887.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206709335|emb|CAR33675.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326623930|gb|EGE30275.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628326|gb|EGE34669.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 165/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|156539324|gb|ABU80587.1| dTDP-6-deoxy-L-mannose dehydrogenase [Shigella flexneri] gi|156539339|gb|ABU80597.1| dTDP-6-deoxy-L-mannose dehydrogenase [Shigella flexneri] gi|168481276|gb|ACA24768.1| RmlD [Shigella flexneri 6] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAK A+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|9957816|gb|AAG09499.1|AF279615_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVVLNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|39997461|ref|NP_953412.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA] gi|39984352|gb|AAR35739.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA] gi|298506397|gb|ADI85120.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens KN400] Length = 280 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 158/284 (55%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G G + + L + DV + + +ID+ P+ L+ P V++N AAYT V Sbjct: 3 LVVGAKGMLGRDLMRVLPGDVRGVDI--EEIDITSPESVRRVILTLKPRVVVNCAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E ++A ++N EG G +A IG + +STDYVFDG+ +P E P NPL++ Sbjct: 61 DGCETNADLAMAVNGEGVGHLAAVTREIGALLVQMSTDYVFDGVKESPFLEDDPPNPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GEE+ A T +++I+RT W+Y + G NF+ +MLRL+ ER EI+VV DQ G+PT Sbjct: 121 YGRSKLMGEEQ-ARETPDHLIVRTQWLYGLGGKNFVETMLRLSTERSEIAVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + +A AI LIEN + RG +H A+ G SW DFA IF E+ G V Sbjct: 180 WTVDLALAI----SELIEN---NCRGTYH-AANRGICSWFDFARAIFAEA----GVEMTV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 T Q A RP YS L C KL + + W+E + L Sbjct: 228 RPQTTAQLGRPAPRPLYSALCCDKLTRDTGLELEGWREALATYL 271 >gi|188993126|ref|YP_001905136.1| hypothetical protein xccb100_3731 [Xanthomonas campestris pv. campestris str. B100] gi|14090388|gb|AAK53464.1|AF204145_4 dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris] gi|167734886|emb|CAP53098.1| rmlD [Xanthomonas campestris pv. campestris] Length = 302 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 117/304 (38%), Positives = 157/304 (51%), Gaps = 21/304 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R GR PD D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDRIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDCAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQDTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A IA I L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPAALIA----DITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E+ G P +V I T YPT A RPAYS L KL +I + W+ G++ + Sbjct: 236 EEAVSAGLLPRAP--RVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRV 293 Query: 287 LVNI 290 + + Sbjct: 294 IAEV 297 >gi|226290772|gb|ACO40471.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dakar] gi|298353034|gb|ADI77013.1| RmlD [Salmonella enterica] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 166/296 (56%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A+RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPANRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|268593348|ref|ZP_06127569.1| dTDP-4-dehydrorhamnose reductase [Providencia rettgeri DSM 1131] gi|291311045|gb|EFE51498.1| dTDP-4-dehydrorhamnose reductase [Providencia rettgeri DSM 1131] Length = 290 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 165/289 (57%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ GQ+ L + E++ + +D+ F P++IIN AAY Sbjct: 1 MRVLVTGSKGQVGHCLEEQLTNETELLALDSTQLDITDKAAVFRIISEFKPNIIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E + + +IN +G +AKAA IG ++ISTDYVF G P E TNP Sbjct: 61 TAVDRAEQEIKQSENINIKGPEYLAKAAHHIGAAILHISTDYVFGGDKELPYTENDITNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V + ++ILRT+WV+S G+NF+ +ML+LA ER +S+V DQ+G Sbjct: 121 KSVYGQTKLNGEVAVINSCPRHIILRTSWVFSQHGNNFVKTMLQLAAERTNLSIVSDQYG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA +I +A + N+ GI+H + G P VSW +FA+YIF ++ + Sbjct: 181 GPTDAADIASTLINLAERIHYNNFEGY-GIYHYS--GFPYVSWYEFAQYIFEQATNKKII 237 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K V I T YPT A RP S LD +K+ I S W+ ++ I Sbjct: 238 LTKPLVNAIKTTDYPTAAMRPHNSRLDLTKI-QLLGINASNWQLSLQQI 285 >gi|71907371|ref|YP_284958.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] gi|71846992|gb|AAZ46488.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] Length = 320 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 14/297 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ L +++ GR DL S P VI+N AY Sbjct: 18 MKILLLGKDGQVGWQLQRSLAPHGDVVACGRAQCDLSDLAQIRSVVRETRPSVIVNATAY 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A INA+ G +A+ A + ++ STDYV+DG + E T P Sbjct: 78 TAVDKAESEPELARRINADAPGVLAEEAAQLNALLVHYSTDYVYDGAKASAYLETDVTAP 137 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KLAGEE + + +I RT+WV+ G NF+ ++LRLA+E+ ++VV DQ G Sbjct: 138 QSVYGRTKLAGEEAIRAAGGKSLIFRTSWVFGARGGNFVKTILRLAREKESLNVVADQIG 197 Query: 181 TPTSALQIAR----AIIQIAH-NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 +PT A IA A+ + H L+E S++ L +H+ A PVSW DFA I + + Sbjct: 198 SPTPAALIATVTGIALAMLQHGKLLEKSESRL---YHLAAS-RPVSWCDFARTIVGLAGQ 253 Query: 236 RGG-----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I T +YPT A RPA S LDC +L N +++ W+ + +L Sbjct: 254 APGFDLRLKSGAIQAISTAEYPTPACRPANSRLDCGRLENDFGLQMPDWQPYLERML 310 >gi|126741095|ref|ZP_01756777.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. SK209-2-6] gi|126717859|gb|EBA14579.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. SK209-2-6] Length = 287 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 164/288 (56%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L++ + +GR + DL P A+ + +P +IN AAYTAV Sbjct: 8 LVFGKTGQLARELAAY----DNVTCLGRGEADLTDPAACAAAIKAHAPAAVINAAAYTAV 63 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E +A IN E GA+A+A ++GIP + +STDYVFDG TP P+N Sbjct: 64 DKAEEEEALATVINGESPGAMAEACAALGIPFVTVSTDYVFDGSGTTPWQAGDAVAPVNA 123 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGEE + + ILR +WV S G NF+ +MLRL ER ++++ DQ G PT Sbjct: 124 YGRSKLAGEEATRAAGGTHAILRCSWVVSCHGGNFVKTMLRLGAEREALTIIADQIGAPT 183 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A +ARA +++A L ++ S G +H+ G P VSWA FA IF ++ Sbjct: 184 PARDLARACLEMAGQLQQDPGKS--GTYHL--QGRPEVSWAGFAREIFAQA----NVACT 235 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ L N I W++G+ IL ++ Sbjct: 236 VTDIPTTDYPTPAARPLNSRLDCTALENVFGISQPDWRQGLSEILKDL 283 >gi|30249026|ref|NP_841096.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas europaea ATCC 19718] gi|30138643|emb|CAD84934.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas europaea ATCC 19718] Length = 304 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 112/298 (37%), Positives = 163/298 (54%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 +K L+ G NGQ+ L E+I + D+ DL + PD+I+N Sbjct: 8 IKILLFGKNGQVGWELQRSLAPLGELIAPDKQDLRYCGDLADLAGITHTLQTIRPDIIVN 67 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE EPE+AF INAE +A+ A+ IG I+ STDYVF+G P E Sbjct: 68 AAAYTAVDQAESEPELAFRINAEAPELLAQQAEQIGAWLIHYSTDYVFNGNGNCPWQETD 127 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+P+NIYG SKL GEE++ Y+ILRT+WVY+ G NF+ ++LRLA+E+ +++++ Sbjct: 128 LTSPINIYGLSKLRGEEQIRKSNCKYMILRTSWVYAARGKNFIKTILRLAREKEQLTIID 187 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A Q L+E D S G++H+ A VSW +A ++ + E Sbjct: 188 DQIGAPTGAELLADITAQAIPQLLEYPDKS--GVYHVAA-SEEVSWYSYARFLLDFAREH 244 Query: 237 GGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P V + ++ + T A RP S L+ K NT + + W+ GV +L I Sbjct: 245 DIPIKVHPDAVIPVHSEAFVTAARRPLNSRLNTEKFCNTFQLCLPHWQTGVTRVLEEI 302 >gi|183597262|ref|ZP_02958755.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827] gi|188023577|gb|EDU61617.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827] Length = 297 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 114/297 (38%), Positives = 166/297 (55%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L + E+I + R D L K D A PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRALLPLGELIALDRHSKDYCGDLSKLNDLAETIELLQPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EP+++ IN+E +A+ A+ + I+ STDYVF G +E Sbjct: 61 AAAYTAVDKAESEPDVSKLINSEAVKILAQCAEKVNALLIHYSTDYVFSGEGEHFWNEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+ LNIYG++KL GE+ + Y N++ILRT+WVYS FG+NF ++L LAK R ++S++ Sbjct: 121 QTSALNIYGQTKLEGEQYIQKYCPNHLILRTSWVYSTFGNNFAKTILNLAKNREKLSIIS 180 Query: 177 DQFGTPTSALQIARAI-IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PTSA IA I + L + GI+H+ A G +W ++A+ I E+ + Sbjct: 181 DQYGAPTSAALIADCTAIALVKTLQQKEKC---GIYHLVA-SGETNWYEYAKLITEEAKK 236 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I +YP A RP S ++ SK + NI + WK GV ++ I Sbjct: 237 NNIKLSLNEINPISATEYPLPAKRPYNSRMNSSKFKKSFNIELPDWKIGVIRLIKEI 293 >gi|16611738|gb|AAL27323.1|AF402313_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 163/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAK A+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKTANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLNIYG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNIYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEAA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RNAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|121606379|ref|YP_983708.1| dTDP-4-dehydrorhamnose reductase [Polaromonas naphthalenivorans CJ2] gi|120595348|gb|ABM38787.1| dTDP-4-dehydrorhamnose reductase [Polaromonas naphthalenivorans CJ2] Length = 296 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 165/298 (55%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQI L E++ + R D+ DL A + PDVI+N Sbjct: 1 MKILLLGKNGQIGWELQRSLAPLGEVVALDRHSQDLCGDLADLPGLARTVQAVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E+ +INA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDRAESESELVRTINALAPGMLAQEASKLGAWLVHYSTDYVFDGSGSRPWVESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG+SKL GE+ +A + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 121 TPAPLSVYGQSKLEGEQLIAEHCQRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + G++H+ A G +W +A+++ ++A Sbjct: 181 DQWGAPTGAELLADVTAHAIRQALQCPQDA--GLYHLAAS-GETTWNGYAKHVIAQAARA 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + T +PT A RP S LDC++L T +++ W++GV +L I Sbjct: 238 QTAIKIVANDVAAVPTSAFPTPARRPHNSRLDCTRLQTTFGLKLPPWQQGVDRMLAEI 295 >gi|315921705|ref|ZP_07917945.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695580|gb|EFS32415.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 283 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 162/286 (56%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +V G NGQ+ + + ++ + ++++ + ++ ++++N AAYT Sbjct: 1 MVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E P Sbjct: 61 AVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDPCPD 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KL GE V +Y V++RTAW+YSIFG+NF+ +M+RL KER + VV DQ GT Sbjct: 121 SVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSIFGNNFVKTMIRLGKERDSLGVVFDQIGT 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 PTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GITSC 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L Sbjct: 231 KVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCL 276 >gi|9957846|gb|AAG09523.1|AF279621_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 167/299 (55%), Gaps = 15/299 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQ+G PT A +A I++A N E + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDYAALVFDEA 234 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 235 RKAGLTLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|168481305|gb|ACA24794.1| RmlD [Escherichia coli] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 163/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L V +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALVPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWYDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKADIPLALNKLNAVPTTAYPTSARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|294341172|emb|CAZ89573.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Thiomonas sp. 3As] Length = 302 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 162/294 (55%), Gaps = 9/294 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L + ++ + R DL + P++I+N AAYT Sbjct: 5 RILLLGADGQVGWELRRALLPLGDVRPLNRTQADLGDLDALRTVLQREQPELIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTN 119 AVDKAE +PE+A INA G +A A ++ STDYVFDG P E N Sbjct: 65 AVDKAETDPELAQRINAAAPGVLAAWAAEHHAMLVHYSTDYVFDGAKPAPGSYTEADTPN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG+SKLAGE+ + + ++ILRT+WVY+ G NF +ML+LA ER + V+ DQF Sbjct: 125 PQSAYGRSKLAGEQAITASGCRHLILRTSWVYAARGGNFAKTMLKLATERDSLRVIADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG 237 G PTSA +A + H L +S + + G++H+TA G SW +A+++ +A RG Sbjct: 185 GAPTSAELLADVTALMLHRLRTDSALAQQASGLYHLTAQGS-TSWHGYAQFVIARAAARG 243 Query: 238 GPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +V I T YP A RPA S LDCSKL T ++ + W+ V+ ++ Sbjct: 244 LPLRCAPEQVQAITTADYPLPAPRPANSRLDCSKLQTTFDLFLPPWQTQVQRLI 297 >gi|283785860|ref|YP_003365725.1| dTDP-4-dehydrorhamnose reductase [Citrobacter rodentium ICC168] gi|282949314|emb|CBG88925.1| dTDP-4-dehydrorhamnose reductase [Citrobacter rodentium ICC168] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 167/294 (56%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S + ++ + V D D P+ PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVRSTDYCGDFSDPEGVVETVRRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA+ AIAKAA +G ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAETEVEFAQLLNAKSVEAIAKAAQEVGAWVVHYSTDYVFPGTGETPWRETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + ++ + ++I RT+WVY+ G+NF +MLRLAKER E+SV+ Sbjct: 121 ATAPLNVYGETKLAGEKALQTHCSRHLIFRTSWVYAGKGNNFAKTMLRLAKERTEMSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A +A AH + + + G++H+ A G +W D+A +IF E+ + Sbjct: 181 DQFGAPTGAELLADC---TAHAIRVAMVKPEVAGLYHLVAS-GTTTWYDYASFIFAEARK 236 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + + T YPT A RPA S L+ K + ++ + W+ GV+ +L Sbjct: 237 AGMNLALRDLKAVPTSAYPTPARRPANSRLNTDKFQQSFDLVLPQWEAGVKRML 290 >gi|168229418|ref|ZP_02654476.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168259600|ref|ZP_02681573.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466246|ref|ZP_02700116.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442608|ref|YP_002041366.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194468557|ref|ZP_03074541.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194401271|gb|ACF61493.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194454921|gb|EDX43760.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631278|gb|EDX49838.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205335940|gb|EDZ22704.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205351277|gb|EDZ37908.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|333003380|gb|EGK22924.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-272] gi|333017210|gb|EGK36530.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-227] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 118/297 (39%), Positives = 165/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A GG +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAANKPE-----VAGLYHLVA-GGTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A R G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARRVGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|323936934|gb|EGB33217.1| RmlD substrate binding domain-containing protein [Escherichia coli E1520] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 116/297 (39%), Positives = 164/297 (55%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVF-EE 233 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A + G K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 234 ARKAGIALALHKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|261868368|ref|YP_003256290.1| hypothetical protein D11S_1708 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413700|gb|ACX83071.1| hypothetical protein D11S_1708 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 294 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 116/290 (40%), Positives = 165/290 (56%), Gaps = 8/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ +SL+ + V + E++ + ++D+ S SF P+VIIN AA Sbjct: 3 RLLITGAGGQLGRSLAKLLVDNGRYEVLALDFSELDITNKDMVFSIIDSFKPNVIINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+AE E A+S+N G +A+AA +++STDYVFDG E + Sbjct: 63 YTSVDQAELEVSSAYSVNVRGVQYLAEAAIRHNSAILHVSTDYVFDGYKSGKYKETDIIH 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK GE + + + +ILRT+W + +G+NF+ +MLRLAK R + VV DQ Sbjct: 123 PLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGNNFVKTMLRLAKNRDILGVVADQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG- 237 G PT + IA +IQIA +I +T GI+H T G P VSW DFA IF E+ + Sbjct: 183 GGPTYSGDIASVLIQIAEKIIVG-ETVKYGIYHFT--GEPCVSWYDFAIAIFDEAVAQKV 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 LEDVPLVNAITTADYPTLAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 289 >gi|9957856|gb|AAG09531.1|AF279623_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNGPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A IF E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALIFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|207728134|ref|YP_002256528.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum MolK2] gi|206591379|emb|CAQ56991.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum MolK2] Length = 305 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAAS-GETTWHGYATAVLRYAKARGLE 248 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|83944593|ref|ZP_00957043.1| hypothetical protein EE36_00250 [Sulfitobacter sp. EE-36] gi|83844570|gb|EAP82457.1| hypothetical protein EE36_00250 [Sulfitobacter sp. EE-36] Length = 288 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 163/291 (56%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ DV+I + R D DL P A+ + +PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGDDVQITALARADADLTDPAACAAAIDARAPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A INA+ A+A+A + IP + ISTDYVF G TP T+P Sbjct: 61 TAVDKAESDTDTAQIINADAPAAMAQACAAHDIPFVSISTDYVFSGAEDTPWAPADATDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K GE + Y +LRT+WV S G+NF+ +MLRL ER +++V DQ G Sbjct: 121 QSVYGRTKRDGEVAIVKAGGRYAVLRTSWVVSAHGNNFVKTMLRLGAEREALTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A +IA+A + I LI S GI+H + G P SWADFA IF + Sbjct: 181 GPTGAAEIAQACVIIVKTLISQPRKS--GIYHFS--GAPDTSWADFARAIF----DAAKI 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ I W+E + +IL+ + Sbjct: 233 PCAVTDIPSTDYPTPAKRPQNSRLDCTTTDAAFGISRPDWRESLTHILLKL 283 >gi|255263484|ref|ZP_05342826.1| dTDP-4-dehydrorhamnose reductase [Thalassiobium sp. R2A62] gi|255105819|gb|EET48493.1| dTDP-4-dehydrorhamnose reductase [Thalassiobium sp. R2A62] Length = 293 Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 117/293 (39%), Positives = 161/293 (54%), Gaps = 14/293 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+A L + +GR D DL P A+ + P +IN AA+T Sbjct: 7 RILVFGKTGQVATELRQRAGTNC----LGRADADLSDPAACAATIRAHHPTAVINAAAFT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E +A INAE A+A A +GIP ++ISTDYVFDG P + T+P Sbjct: 63 AVDQAEAEEPLAHVINAEAPSAMALACAELGIPFLHISTDYVFDGSGTAPWNPSDATSPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG++KLAGE V + + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 123 NAYGRTKLAGEVAVRAAGGTHAILRTSWVFSAHGANFVKTMLRLSETRDALNVVHDQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRG---IFHMTADGGP-VSWADFAEYIFWESAERG 237 PT A IA A++ +A +IE + + G +H G P SW +FA IF + G Sbjct: 183 PTPAADIADALLIMARAMIEGATDATGGTASTYHYA--GNPATSWENFASEIFGTA---G 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S V I T YPT A RP S LDC+ L I W+ + +I+ + Sbjct: 238 RPVS-VTGIPTADYPTPAARPLNSRLDCASLQADFGISPPDWRAALADIIPTL 289 >gi|300704903|ref|YP_003746506.1| tdp-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] gi|299072567|emb|CBJ43917.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] Length = 305 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYVETDTVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAAS-GETTWHGYATAVLRYAKARGLE 248 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|197249923|ref|YP_002147054.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213626|gb|ACH51023.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 299 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLISLDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|294644907|ref|ZP_06722643.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294808802|ref|ZP_06767532.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|292639720|gb|EFF58002.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294443974|gb|EFG12711.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 288 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTVHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|304407807|ref|ZP_07389458.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] gi|304343290|gb|EFM09133.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] Length = 290 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 162/292 (55%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ + ++ + E + + GR ++D+ + +F+P +I+ Sbjct: 8 FRVLVTGANGQLGREIALWATAEAEGLDIRGYGRDELDITDLSQCRAVITAFAPHAVIHC 67 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE +P+ AF +NA G IA AA G Y+STDYVFDG S P +E+ Sbjct: 68 AAYTAVDQAEADPDSAFVVNATGTRNIALAAREAGAKLAYVSTDYVFDGSSAVPYNEYDR 127 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP +YGKSKLAGEE V + + + ++RT+WVY +G+NF+ +M+++ ER + VV D Sbjct: 128 PNPRTVYGKSKLAGEELVRTLHDRHFVVRTSWVYGAYGANFVKTMIKVGAERGAVKVVHD 187 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT +A ++++ T G++H + + G SW +FA IF ES Sbjct: 188 QIGSPTCTFDLAAMLLELVR-------TDAYGVYHAS-NSGTCSWYEFAVAIFEES---- 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G T+++P A RPA+S LD S + I W+E +R+ L Sbjct: 236 GMQVSTEPCTTEEFPRPAPRPAFSVLDHSAIRTNGLTPIRHWREALRDYLAK 287 >gi|307293849|ref|ZP_07573693.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] gi|306880000|gb|EFN11217.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] Length = 285 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 160/292 (54%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G GQ+ +SL++ V ++ + R +D+ + PD++ N AAY Sbjct: 1 MKAVIVGAGGQLGRSLAAHAPSGVTLVALDRAGLDIADEAAVRNRIDKERPDLLFNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A INA G +A AA ++G I++STD+VFDG S +P +PTNP Sbjct: 61 TAVDKAETDEAAARMINARAVGLLADAAQAVGSSFIHVSTDFVFDGKSGSPYLSDAPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE S +I+RTAWVY+ G NF+ +MLRL ER E+ VV DQ G Sbjct: 121 LGVYGRTKLEGERLAGS---TALIVRTAWVYAPQGGNFVRTMLRLMAERPEVRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A A+ +A N + GI H T D G SW DFA I E+ G Sbjct: 178 TPTYAPALASALWHLAQNRV-------FGIHHYT-DAGAASWYDFAVAIQEEALTLGLLQ 229 Query: 241 SKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T ++PT A RP+YS LD W+E +R +L I Sbjct: 230 TAVPIIPIGTDEFPTPARRPSYSVLDKRSTYTHLGKPAPHWRENLRLMLKEI 281 >gi|3132256|dbj|BAA28133.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus actinomycetemcomitans] Length = 294 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 116/290 (40%), Positives = 165/290 (56%), Gaps = 8/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ +SL+ + V + E++ + ++D+ S SF P+VIIN AA Sbjct: 3 RLLITGAGGQLGRSLAKLLVDNGRYEVLALDFSELDITNKDMVFSIIDSFKPNVIINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+AE E A+S+N G +A+AA +++STDYVFDG E + Sbjct: 63 YTSVDQAELEVSSAYSVNVRGVQYLAEAAIRHNSAILHVSTDYVFDGYKSGKYKETDIIH 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK GE + + + +ILRT+W + +G+NF+ +MLRLAK R + VV DQ Sbjct: 123 PLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGNNFVKTMLRLAKNRDILGVVADQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG- 237 G PT + IA +IQIA +I +T GI+H T G P VSW DFA IF E+ + Sbjct: 183 GGPTYSGDIASVLIQIAEKIIV-GETVKYGIYHFT--GEPCVSWYDFAIAIFDEAVAQKV 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 240 LENVPLVNAITTADYPTLAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 289 >gi|237745880|ref|ZP_04576360.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS] gi|229377231|gb|EEO27322.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS] Length = 279 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 164/287 (57%), Gaps = 15/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ + + R +D+ ++ + D IIN AAYTAV Sbjct: 3 LVTGANGQLGSELRNLL--GASAVYIDRETLDISDEAAVRNYLKNNCFDCIINCAAYTAV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AEDEP A ++N G+ +AK I I+ISTDYVFDG S P E TNPL+I Sbjct: 61 DRAEDEPVQANAVNHLGSLWLAKYGKRI----IHISTDYVFDGTSHVPYHEEDKTNPLSI 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGK+KLAGE+ V Y V+LRTAWVYS +G+NF+ ++LR+ + R + VV DQ G+PT Sbjct: 117 YGKTKLAGEKAVLDYAETAVVLRTAWVYSPYGNNFVKNILRMGRTRESLRVVSDQIGSPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 SA +A++II+I ++ T + ++H T + G SW D A + + G + V Sbjct: 177 SAGDLAKSIIEI----LQQMKTGKKDVYHFTNE-GVCSWYDLAVAVM----DLAGLSTPV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 I ++ +PTKA RP YS L K+ + + I W+E + ++ I Sbjct: 228 IPIESRDFPTKAVRPFYSVLSKRKIKTHYGLGIRHWREALGEVIKKI 274 >gi|204929047|ref|ZP_03220190.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321591|gb|EDZ06790.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 299 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDLPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHVVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|296708|emb|CAA80331.1| OAC2 [Azorhizobium caulinodans ORS 571] Length = 296 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 113/282 (40%), Positives = 166/282 (58%), Gaps = 5/282 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G +GQ+ + L+++ V+ + + + R D+ P A + PDV++N AA Sbjct: 1 MRVLLLGADGQLGRELTALAVERGLALAALNRAATDITDPVAVAKALEAHKPDVVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A +NA G IA+ S G+P I++STDYVFDG E P Sbjct: 61 YTAVDKAESEPDLAAKVNAVAPGLIAERCASAGVPLIHVSTDYVFDGTKTGAYVESDPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AGE + + ++ILRTAWVY I+G+NFL +MLRLAK+R +++V DQ Sbjct: 121 PLGVYGRTKAAGEAAIRAAGEKHLILRTAWVYGIYGNNFLKTMLRLAKDRDRLTIVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+ IA I+ A + S + G +H+ G +W FA+ I +A G Sbjct: 181 GCPTATRDIAEGILAAAAPAVAGS--ARWGTYHLGGT-GVTTWHGFAQAIIDRAATYTG- 236 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S+V I T +YPT A RPA S LD S T + R + W++ Sbjct: 237 RSEVAAITTAEYPTPARRPANSELDSSLFERTFHFRAAPWQQ 278 >gi|116071141|ref|ZP_01468410.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. BL107] gi|116066546|gb|EAU72303.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. BL107] Length = 294 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 112/295 (37%), Positives = 157/295 (53%), Gaps = 15/295 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + VE+I R +++L + S PD ++N AY Sbjct: 1 MKILLTGAGGQLGQALQDAKPEAVELISTTRQELNLADAEACRSAVQQHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++N A A+ + G + +STD+VF+G TP NP Sbjct: 61 TAVDKAESEPELAHAVNGGAPEAFAQELERQGGRLLQVSTDFVFNGTQGTPYQPEQTRNP 120 Query: 121 LNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGEE + S +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEEAIQSVFGAGGRGLILRTSWVIGPVGKNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARA---IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 Q G PTS L +ARA +QIA + + + H + D G SW D A + A Sbjct: 181 QVGCPTSTLNLARACWRTLQIA------GERDMPAVMHWS-DNGAASWYDVAVAVGQIGA 233 Query: 235 ERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +KV I T YPT A RP+YS LDC+ + + W++ ++ +L Sbjct: 234 ELGLIDTPAKVQPITTSDYPTPAERPSYSLLDCTSTRSALELDGEHWQQALKAVL 288 >gi|264678896|ref|YP_003278803.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262209409|gb|ACY33507.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 301 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 114/305 (37%), Positives = 164/305 (53%), Gaps = 20/305 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDIGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKEGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +SV+ DQ+G PT A IA + H + D G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHMSAHDGDG---GLYHLVA-AGETNWHAYASHVI 236 Query: 231 WESAERGGP--YSKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 E A+ P SKV I T +PT A RP S LD KL + + W++GV Sbjct: 237 -ERAQSLRPDLDSKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQAAMQLHLPAWQQGVER 295 Query: 286 ILVNI 290 +L I Sbjct: 296 MLREI 300 >gi|299532672|ref|ZP_07046060.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni S44] gi|298719307|gb|EFI60276.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni S44] Length = 301 Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 162/304 (53%), Gaps = 18/304 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGRNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDVGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKEGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHVSAHEGDG--GLYHLVA-AGETNWHAYASHVI- 236 Query: 232 ESAERGGP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E A+ P + + T +PT A RP S LD KL T + + W++GV + Sbjct: 237 ERAQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERM 296 Query: 287 LVNI 290 L I Sbjct: 297 LREI 300 >gi|308048797|ref|YP_003912363.1| dTDP-4-dehydrorhamnose reductase [Ferrimonas balearica DSM 9799] gi|307630987|gb|ADN75289.1| dTDP-4-dehydrorhamnose reductase [Ferrimonas balearica DSM 9799] Length = 303 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 161/296 (54%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A LS + VE++ ++D+ + + F PDV+IN AAY Sbjct: 1 MKVLVTGKGGQLAYELSQTLPEGVELVSFSAQELDITDREAVIARFEEVQPDVVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + ++A+++N GA +A A ++ISTD+VFDG S TP NP Sbjct: 61 TAVDKAESDQKMAYAVNESGAENLALACRQWSAKLVHISTDFVFDGRSTTPYQPEDAPNP 120 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 LN+YG SKLAG+ KV+ N VI+RTAWVYS FG+NF+ +M+RL E+ ++ ++ DQ Sbjct: 121 LNVYGASKLAGDNKVSEVLGQNAVIVRTAWVYSCFGNNFVKTMIRLMAEKEQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI------ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 GTPT A +A+ ++A L E + H T D G SW DFA I + Sbjct: 181 GTPTWAKGLAQLSWRLAEQLASGNLPREEVPEHQALMLHWT-DAGVASWFDFAVAIQELA 239 Query: 234 AERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E+G V I YPT A RPA+S +D S T W+ + N+L Sbjct: 240 LEKGLLDKSIPVRPIPASAYPTPAKRPAFSVIDKSLTETTTGKCTIHWRAQLSNML 295 >gi|168481377|gb|ACA24860.1| RmlD [Shigella dysenteriae] Length = 299 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P N+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPRNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|9957851|gb|AAG09527.1|AF279622_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDSCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|168481317|gb|ACA24805.1| RmlD [Shigella dysenteriae] gi|187880616|gb|ACD37122.1| RmlD [Shigella boydii] Length = 299 Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 164/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGMYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPATAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|312962411|ref|ZP_07776902.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311283338|gb|EFQ61928.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 298 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 109/299 (36%), Positives = 163/299 (54%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L +++ + D L + A+ F+PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRSLAPLGQVLALDSKSQDYCGDLNDLQGLAATVQRFAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EP A +NAE +A + ++ STDYVF G TP E Sbjct: 61 AAAYTAVDKAESEPAQALRVNAEAPAVLAAEVRKLNALLVHYSTDYVFAGDGDTPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG +KL GE+ + + ++I RT+WVY+ G+NF +ML LA+ER ++V+ Sbjct: 121 PVGPLSVYGTTKLQGEQAIQASGCAHLIFRTSWVYAARGNNFAKTMLGLARERDSLNVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFGTPT A +A AH + ++ + L G++H+ A G +W +A ++ ++ Sbjct: 181 DQFGTPTGADLLADI---TAHAIRSQHLNPQLSGVYHLAA-AGETTWHRYARFVLEQAQA 236 Query: 236 RGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G S V I T YPT A RP S L+ KL N ++R+ W++GV +L+ I Sbjct: 237 AGVQLSVTPANVGAITTAAYPTPAKRPGNSRLNTQKLQNAFSLRLPEWQDGVARMLIEI 295 >gi|315299447|gb|EFU58698.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 16-3] Length = 299 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 113/294 (38%), Positives = 161/294 (54%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YGK+KLAGE + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 VTAPLNVYGKTKLAGERALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A+ G +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAN-GTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGIDLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|157158895|ref|YP_001463391.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli E24377A] gi|157080925|gb|ABV20633.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli E24377A] Length = 299 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 111/293 (37%), Positives = 161/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + K + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 GIPLALNKFNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|115345654|ref|YP_771835.1| dTDP-4-dehydrorhamnose reductase [Roseobacter denitrificans OCh 114] gi|115292975|gb|ABI93427.1| dTDP-4-dehydrorhamnose reductase [Roseobacter denitrificans OCh 114] Length = 307 Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 164/291 (56%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L+ + + +GR DL P + D +IN AAY Sbjct: 27 MKILVFGQTGQVATELAQL----DGVTCLGREQADLSDPGACEAVIAGCDADAVINAAAY 82 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ + A +NA A+A AA + GIP ++ISTDYVFDG + P +PT P Sbjct: 83 TAVDKAEEDRDTAMIVNAMAPTAMAAAAAARGIPFVHISTDYVFDGSGQRPWQPDAPTGP 142 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKL GE+ VA+ + ILRT+WV+S G+NF+ +M RL ER +++V DQ G Sbjct: 143 LGVYGASKLGGEKGVAAAGGAHAILRTSWVFSAHGANFVKTMRRLGAERDALTIVADQIG 202 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IA ++IA L + D S G +H + G P +SWADFA IF +S G Sbjct: 203 GPTPARDIAAVCVEIARALTQ--DPSKSGTYHFS--GAPDISWADFAREIFAQS----GL 254 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T QYPT A RP S LDCS T I W+ G+ +L ++ Sbjct: 255 SVDVTDIPTSQYPTPAQRPLNSRLDCSTTTATFGIPRPDWRTGLAGVLSDL 305 >gi|307728806|ref|YP_003906030.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] gi|307583341|gb|ADN56739.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] Length = 297 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 109/285 (38%), Positives = 153/285 (53%), Gaps = 7/285 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ +I ++DL + P +I+NPAAYTAV Sbjct: 10 LLTGVNGQVGFELARSLQGLGTVIAPRSNELDLSDLEQVRRVVREMKPSLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + A +NAE +A+ A +G ++ STDYVFDG E NP+N+ Sbjct: 70 DKAETDVDAAMRLNAEAPAVLAEEAKRLGAALVHYSTDYVFDGAKDGAYVEGDRVNPINV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE+ +++ ++I RT+WVY + G NFLL+MLRL ER E+SVV DQ G PT Sbjct: 130 YGRSKLAGEQAISAVGGAHLIFRTSWVYGMRGKNFLLTMLRLGAEREELSVVADQLGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA + + I + S G++H+T+ GG SW FAE IF S P Sbjct: 190 WSNTIATSTAHVLSQAIASDGESWWREHSGVYHLTS-GGATSWHGFAEAIFEVSNLARKP 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 K + YPT A RPA S + KLA +R W+E ++ Sbjct: 249 VVKP--VPASAYPTPASRPANSSMSNDKLAAAFGVRAPDWREALQ 291 >gi|255693796|ref|ZP_05417471.1| dTDP-4-dehydrorhamnose reductase [Bacteroides finegoldii DSM 17565] gi|260620419|gb|EEX43290.1| dTDP-4-dehydrorhamnose reductase [Bacteroides finegoldii DSM 17565] Length = 286 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 166/289 (57%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + + ++D+ + S+ DVI+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHLYYFTDVQELDICDKEAVWSYISEKQIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A +N+ G +A+AA + I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNRELAHKLNSVAPGILARAAQANNAAMIQVSTDYVFDGTAHTPYAEECKP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG +KL GE++V + V++RTAW+YSI+G+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSIYGSTKLEGEQEVMDHCEKAVVIRTAWLYSIYGNNFVKTMIRLGKERDGLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E + + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLERCI 279 >gi|331004825|ref|ZP_08328243.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989] gi|330421356|gb|EGG95604.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989] Length = 304 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 167/290 (57%), Gaps = 9/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLK---PKDFASFFLSF-SPDVII 55 ++ L++G +GQ+ + Q ++ + R ++DL + L F +P +++ Sbjct: 6 IRILLLGASGQVGSECKKLFQQVGYTVLCITRKELDLSSISSVDEIVERLLCFQTPSLVV 65 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP +A +N G +A+ IP I+ISTDYVFDG + T E Sbjct: 66 NAAAYTAVDKAESEPSLADKVNHTSVGFLAQYCAKGAIPLIHISTDYVFDGTATTAYTES 125 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PL +YG++K GE+ V S ++ILRT+WV+ I G+NF+ +MLRL+ +R ++++V Sbjct: 126 DDVSPLGVYGETKWLGEQAVKSVLAQHIILRTSWVFGISGNNFVKTMLRLSADREQLTIV 185 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT A IARAI+ I + G++H + G VSW +F++ I E+ Sbjct: 186 SDQYGCPTYAGDIARAILCIVKRYASGQSLNW-GVYHCVGE-GKVSWYEFSQAILNEAYA 243 Query: 236 RGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 RG +K + I + YPT A RPAYS L KLA N + +W++G+ Sbjct: 244 RGFMPNKPQIIPIPSSAYPTPAARPAYSVLSTDKLAREFNYSVPSWRQGL 293 >gi|218708292|ref|YP_002415913.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio splendidus LGP32] gi|218321311|emb|CAV17261.1| putative dTDP-4-dehydrorhamnose reductase (rfbD) [Vibrio splendidus LGP32] Length = 286 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 162/290 (55%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK ++ G GQ+A L + Q VE+I VG + D+ F ++ PD++IN AAY Sbjct: 1 MKVVITGKGGQLAYELEQLAPQGVEVISVGINEFDITNEILVTEFLINTKPDLVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ + A+++N G +A A I +++STD+VFDG S P S NP Sbjct: 61 TAVDKAEEDIDAAYAVNELGTKYLANACKQINARILHVSTDFVFDGTSSAPYQTSSEPNP 120 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG SKLAGE + VI+R+AWVYSI G+NF+ SML L +E++++ ++ DQ Sbjct: 121 INVYGASKLAGELVLQEILPEASVIVRSAWVYSINGNNFVKSMLCLMQEKQQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 GTPT A +A+ + IA + GI H T D G SW DFA I E+G Sbjct: 181 GTPTWAKGLAQWLWTIADR------PEVTGIHHWT-DAGVASWYDFAIAIQELGVEKGLL 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T +YPT A RP +S +D I+ + W++ + +L Sbjct: 234 KEAIPIFPISTSEYPTLAKRPEFSVIDKFSAEEVSGIKTTHWRKQLSEML 283 >gi|152994872|ref|YP_001339707.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] gi|150835796|gb|ABR69772.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] Length = 291 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 113/298 (37%), Positives = 167/298 (56%), Gaps = 16/298 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 M+ L+ G NGQ+ + C QD+ E+ G ++++ + PD+I Sbjct: 1 MRILLTGKNGQLGR-----CFQDLLIGANHELYAYGSDSLNIVDAQQVVDVVQHVKPDII 55 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVDKAE + + A+ +N+ G +A A ++ IP I++STDYVFDG S P Sbjct: 56 VNAAAYTAVDKAESDAKNAYLVNSTGPELLAIQAAALDIPFIHVSTDYVFDGKSVEPYLP 115 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNP +YG SKLAGE V + Y+ILRTAWV+S +GSNF+ +M+RLAK+R E+ V Sbjct: 116 SDKTNPQGVYGASKLAGERAVTAACEKYIILRTAWVFSEYGSNFVKTMVRLAKDRSELCV 175 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ+G PT A +A+AI+ I + + GI+H D P SW FA IF+ + Sbjct: 176 VADQYGCPTYAGDLAKAILHICEQ-CQVGKSLPWGIYHYCGD-TPTSWHGFARAIFYRAE 233 Query: 235 ERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I + YPT A RP YS + ++L + + S W G+ ++L + Sbjct: 234 ALGVIDKSPQLKAISSDLYPTPAKRPEYSVMS-TELLSRIELDASFWMAGLFSVLSKL 290 >gi|187922883|ref|YP_001894525.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187714077|gb|ACD15301.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 298 Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 155/285 (54%), Gaps = 7/285 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L+ ++ V +DL P + + P +I+NPAAYTAV Sbjct: 11 LVTGVNGQVGFELARTLQGLGTMVAVDHAAMDLSDPDQVRAVVRNIRPTLIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E ++A IN E G +A+ A +G ++ STDYVF+G E PT+P N Sbjct: 71 DKAEEELDLAMRINGEVPGVLAEEAKKLGAALVHYSTDYVFNGEKDGAYVEDDPTDPQNA 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KLAGE+ +A+ +++I RT+WVY G NFLL+MLRL ER E+SVV DQ G PT Sbjct: 131 YGRTKLAGEQAIAASGCDHLIFRTSWVYGTRGKNFLLTMLRLGAERDELSVVADQIGAPT 190 Query: 184 SALQI----ARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + I A + Q A + G++H+TA G SW FAE IF S P Sbjct: 191 WSKTIATLTANVLAQAAAPGQGDWWQQRSGVYHLTA-AGSASWHGFAEAIFELSGLAKTP 249 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 V I YPT A RP S + KLA T ++ W++ ++ Sbjct: 250 --TVKPIPAASYPTPAKRPGNSRMSNDKLARTFGVQAPDWRDALQ 292 >gi|315649764|ref|ZP_07902847.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus vortex V453] gi|315274738|gb|EFU38119.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus vortex V453] Length = 294 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 175/293 (59%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ Q ++++ + +II GR ++D+ + S +PD II+ AA Sbjct: 1 MKVLVTGANGQLGQDVTNVLAEAGYQIIGCGRAELDITNMELCEQVISSHNPDFIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +N G IA +A+ IG +YISTDYVF+G S T E+ T+ Sbjct: 61 YTAVDAAETDTDGAYRVNTLGTRNIAVSAEKIGAAVVYISTDYVFNGTSETAYVEYDDTD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKLAGE+ + + + + I+RT+WV+ + G+NF+ +MLRL +E+ ++ VV DQ Sbjct: 121 PQTIYGRSKLAGEQMLRDFCSKWFIVRTSWVFGLHGNNFVKTMLRLGQEKPQLKVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A+ ++ NLI T G++H ++ G +W +F + IF E+ E+ G Sbjct: 181 GSPTYTVDLAQFLL----NLI---STEKYGLYH-ASNSGSCTWYEFTQAIFEEAREQLGL 232 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ T ++P A RPA S +D + + W+EG++ +V++ Sbjct: 233 EIMAELQPCTTAEFPRPAPRPANSTMDHLAIRLNQLEDLPHWREGLKQFMVDM 285 >gi|94311666|ref|YP_584876.1| dTDP-4-dehydrorhamnose reductase [Cupriavidus metallidurans CH34] gi|93355518|gb|ABF09607.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Cupriavidus metallidurans CH34] Length = 306 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 118/295 (40%), Positives = 160/295 (54%), Gaps = 8/295 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+NGQ+ L ++ + R DL +P S PDVI+NPAAYTA Sbjct: 11 LLVTGSNGQVGFELRRSLAPLGRVVALDRSQFDLTRPDALRELVRSIRPDVIVNPAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E AF++N G +A+ A +G ++ STDYVFDG E NP + Sbjct: 71 VDKAETEAEAAFAVNGVAPGVLAEEARRLGSLFVHYSTDYVFDGTKDGAYLEGDAVNPQS 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGE+ VA+ ++LRT WV G NF +MLRLA+ER + V+ DQFG P Sbjct: 131 VYGKSKLAGEQVVAATGAASLVLRTCWVAGAHGGNFAKTMLRLARERDSLRVIADQFGAP 190 Query: 183 TSALQIARAIIQIA--HNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 T+A IA QI H L + G++H+ A GG +W +A ++ +A +G Sbjct: 191 TTASLIADVTAQIVARHWLHAPGREAFPTGVYHLAA-GGETTWHGYATHVLSRAAAKGVE 249 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I QYP A RPA S LD KL +T NI + W EG+ +L I Sbjct: 250 MKVDPTRIEPIPASQYPLPAPRPANSRLDTGKLRDTFNIHLPDWAEGIDLLLDQI 304 >gi|87303235|ref|ZP_01086028.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 5701] gi|87282130|gb|EAQ74091.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 5701] Length = 310 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 113/301 (37%), Positives = 158/301 (52%), Gaps = 17/301 (5%) Query: 3 CLVIGNNGQIAQSLSSMC---VQDVEIIRVGRPDIDLLKPKD-----FASFFLSFSPDVI 54 LVIG +GQ+A +L + + ++ RP++DL P P ++ Sbjct: 7 VLVIGRSGQVASALRRLAPTLLTQRPLLLAARPELDLAAPAPELDATVEQLLEQHQPALV 66 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVDKAE EPE+A +IN G +A+A + +P ++STDYVF G P E Sbjct: 67 LNAAAYTAVDKAESEPELAAAINNAAVGVLARACAARSLPLFHLSTDYVFAGGGERPWRE 126 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 PT PL +YG SKL GE + + +++LR +WV+ + G+NF+ +MLRL ER +SV Sbjct: 127 DDPTGPLGVYGASKLGGEGALRAAGGPHLLLRVSWVFGVEGANFVRTMLRLGAERPALSV 186 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENS---DTSLR---GIFHMTADGGPVSWADFAEY 228 V DQ G PTSA IA + +A I N D L G +H + VSW FAE Sbjct: 187 VADQIGGPTSAEAIATTWLSLAEAAIANRSQLDPDLPFPWGTYHYAGEPA-VSWYGFAEA 245 Query: 229 IFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 IF E+ G + I T YPT A RPA S ++ S+ +I W+E +R Sbjct: 246 IFAEAVALGLLARAPDLTPIPTSAYPTPAQRPANSRMETSRFRAAFDIPPPDWREDLRTC 305 Query: 287 L 287 L Sbjct: 306 L 306 >gi|209518633|ref|ZP_03267451.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] gi|209500916|gb|EEA00954.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] Length = 308 Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 8/291 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L+ ++ V R +DL + + P +I+NPAAYTAV Sbjct: 11 LVTGVNGQVGYELARTLQGLGNVVAVDRSRLDLSNFEQIRAVVRDLRPALIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E ++A IN E G +A+ A +G I+ STDYVF+G E PT+P N+ Sbjct: 71 DKAEEERDLAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFNGTKEGAYVEDDPTDPQNV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQFG PT Sbjct: 131 YGRSKLAGEQAIAATGVNHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAPT 190 Query: 184 SALQIARAIIQIAHNLIENSD-----TSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 IA + D + GI+H+ A G SW FA IF + Sbjct: 191 WCNTIATLTAHLCAQSFAAEDGAKWWSERTGIYHLCA-GDSTSWHGFASAIFELADLPNK 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P I YPT A RPA S + KLA + W++ ++ L + Sbjct: 250 P--NTLPIPAADYPTPATRPANSRMSNEKLARVFGLAAPHWRDALKLCLTD 298 >gi|225376962|ref|ZP_03754183.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM 16841] gi|225211283|gb|EEG93637.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM 16841] Length = 307 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 169/293 (57%), Gaps = 24/293 (8%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ ++++ DV I G +D+ K + S + P+VI Sbjct: 20 KILVTGCNGQLGRAINKEYAGSDVTFINTDVAEGEGVTALDITKIEQVLSLVRAEQPEVI 79 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA+++G I++STDYVF+G P E Sbjct: 80 INCAAHTNVDACEKQWDAAYRINALGPRNLSIAAEAVGAKMIHVSTDYVFEGNGTKPYTE 139 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F NP++ YGK+KL GE+ V ++N++ I RTAW+Y G NF+ +ML L++ E+SV Sbjct: 140 FDAPNPVSAYGKTKLEGEKFVQQFSNHFFIFRTAWLYGD-GKNFVKTMLNLSETHDEVSV 198 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++A+AI H+ T G++H T + G +WADF E IF Sbjct: 199 VCDQLGSPTSAVELAKAI----HHF---EGTENYGLYHATCE-GDTNWADFTEEIF---- 246 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +R G +KV + +KQY P A RPAYS LD + +++ WK+ + Sbjct: 247 KRAGKSTKVNHVTSKQYKQMNPAAADRPAYSILDNYMMRLADGYQMADWKDAL 299 >gi|9957861|gb|AAG09535.1|AF279624_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQCNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|256017787|ref|ZP_05431652.1| dTDP-4-dehydrorhamnose reductase [Shigella sp. D9] gi|332278808|ref|ZP_08391221.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella sp. D9] gi|332101160|gb|EGJ04506.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella sp. D9] Length = 299 Score = 191 bits (486), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 116/296 (39%), Positives = 166/296 (56%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEAEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|117618108|ref|YP_857411.1| dTDP-4-dehydrorhamnose reductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559515|gb|ABK36463.1| dTDP-4-dehydrorhamnose reductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 295 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 115/297 (38%), Positives = 161/297 (54%), Gaps = 12/297 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L I V D KP A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGRITAVDFDSTDYCGDFSKPAGVAETVRQVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +N AIA+ A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNITSVAAIAREAEALGAWLVHYSTDYVFDGSGERPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ A+ + ++I RT+WVY+ G+NF +MLR KER E+SV+ Sbjct: 121 VTAPLNVYGETKLAGEQ-AAALCSRHLIFRTSWVYAARGANFAKTMLRFGKERSEMSVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A +A AH L + S + G++H+ A G +W D+A+ +F ++ E Sbjct: 180 DQFGAPTGAELLADC---TAHVLRVAQSRPEVAGLYHLIAS-GTTTWFDYAQLVFAKARE 235 Query: 236 RGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD SK T ++ + W GV +L I Sbjct: 236 AGVELAVTQLNAVPTSAFPTPAKRPHNSRLDTSKFQRTFDLVLPDWTVGVERMLTEI 292 >gi|241758736|ref|ZP_04756849.1| dTDP-4-dehydrorhamnose reductase [Neisseria flavescens SK114] gi|241320944|gb|EER57157.1| dTDP-4-dehydrorhamnose reductase [Neisseria flavescens SK114] Length = 287 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 166/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF+INA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAINATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +GSNF+ +MLRLAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGSNFVKTMLRLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AII + TS RGIFH + +W +F + IF + + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTDQYPLPAPRPAYSIMDCSRLETKFGIKPSDWQKALREILRTI 286 >gi|237723307|ref|ZP_04553788.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447829|gb|EEO53620.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 283 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 110/286 (38%), Positives = 161/286 (56%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +V G NGQ+ + + ++ + ++++ + ++ ++++N AAYT Sbjct: 1 MVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E P Sbjct: 61 AVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDPCPD 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ GT Sbjct: 121 SVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQIGT 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 PTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GITSC 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L Sbjct: 231 KVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCL 276 >gi|309780787|ref|ZP_07675528.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA] gi|308920469|gb|EFP66125.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA] Length = 305 Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 153/293 (52%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G+NGQ+ L ++I + R DL +P + PDVI+NPAAYTAV Sbjct: 12 LVTGSNGQVGFELRRSLAPLGDVIALDRATCDLTRPDMLRKVVREYRPDVIVNPAAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + AF++N+ AG +A+ ++G ++ STDYVFDG E P NP ++ Sbjct: 72 DKAETDAQTAFAVNSTAAGVLAEETRALGSLLVHYSTDYVFDGTKDGAYVETDPVNPQSV 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGEE +A +++RT WV G NF +ML+L +ER + V+ DQFG PT Sbjct: 132 YGKSKLAGEEAIAQSGATALVMRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGAPT 191 Query: 184 SALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 +A IA QI D + G++H+ A G +W +A + + G Sbjct: 192 TAALIADVTAQIVARAWLAGDRAAFPSGVYHLAA-AGETTWHGYATAVLRYAKALGVELK 250 Query: 242 ----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S ++ KL T + + W+ G+ +L I Sbjct: 251 VDPDRIEAIPATAYPLPAPRPANSRMNTGKLVETFGVHLPDWQRGIHLLLDQI 303 >gi|153864709|ref|ZP_01997517.1| RmlD substrate binding domain [Beggiatoa sp. SS] gi|152145797|gb|EDN72484.1| RmlD substrate binding domain [Beggiatoa sp. SS] Length = 289 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 158/289 (54%), Gaps = 18/289 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 + L+IG GQ+ L CVQ + E+ VGR IDL P P + Sbjct: 5 RILLIGPTGQVGWELQR-CVQPLGEVFTVGRAPTGVAQAFIDLSDPDSIRRVLREIKPTI 63 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+N AAYTAVDKAE E E+A +IN G +A+ + + I+ STDYVFDG Sbjct: 64 ILNAAAYTAVDKAEQESELAHTINGTAPGILAEESLRLKSLLIHYSTDYVFDGSHSQAYT 123 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NPL +YG SKLAGE+ + + +Y I RTAWVY + G NFLL+M RLAKER E+ Sbjct: 124 ETDAVNPLCVYGTSKLAGEQAICAVGGHYFIFRTAWVYGLRGKNFLLTMQRLAKERDELK 183 Query: 174 VVCDQFGTPTSALQIARA----IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +V DQ G PT + IA+A + Q+ L + L GI+++T+ G +W +FA+ I Sbjct: 184 IVADQIGAPTWSQMIAQATALILAQLRSPLYSSDIEGLSGIYNLTS-AGQTNWYEFAKAI 242 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + ++ ++ I T YPT A RPAYS +KLA T I + T Sbjct: 243 IAQLDKQ----PRMLPITTADYPTPAKRPAYSVFINTKLAQTFGISLPT 287 >gi|114571005|ref|YP_757685.1| dTDP-4-dehydrorhamnose reductase [Maricaulis maris MCS10] gi|114341467|gb|ABI66747.1| dTDP-4-dehydrorhamnose reductase [Maricaulis maris MCS10] Length = 287 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 157/288 (54%), Gaps = 5/288 (1%) Query: 5 VIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDF-ASFFLSFSPDVIINPAAYTA 62 + G GQ+A+ L S +++ + R ++DL A+ + V++N AAYTA Sbjct: 1 MFGTTGQVARCVLDSAGNAGLDVTALSRVNVDLADQDAIRAAIMAAPEGSVVVNAAAYTA 60 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +INA +A+A G ++ISTDYVFDG TP E PTNP Sbjct: 61 VDQAESDEASCRAINAVAPTVMAEACHKRGFIFLHISTDYVFDGSKATPYFEGDPTNPQG 120 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE V + +VILRTAWVYS +G NFL +MLRL +R + VV DQ G P Sbjct: 121 VYGTTKLEGEAGVREVHDKWVILRTAWVYSRYGKNFLKTMLRLGADRDSLGVVDDQRGCP 180 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A+I + L D G++H GG SWADFA++IF ++R G Sbjct: 181 THAADIATALITLVDQL--RPDDVRFGLYHFCGRGG-ASWADFADHIFAVQSDRWGRRPD 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V R+ + YPT A RPA S L + ++ TW E V+ ++ + Sbjct: 238 VNRVTSADYPTPAKRPANSMLCSDRFSSAFGFTAPTWTESVQTVVEQL 285 >gi|167837610|ref|ZP_02464493.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis MSMB43] Length = 298 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 117/293 (39%), Positives = 155/293 (52%), Gaps = 15/293 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ ++ R ++DL +PD I+NPAAYTAV Sbjct: 9 LLTGINGQVGHELARSLQGLGRVVAFDRCELDLSDLDATRRVVRDVAPDWIVNPAAYTAV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + A +NAE G +A+ A +G ++ STDYVFDG E NP N+ Sbjct: 69 DKAEADVAAAMRLNAEVPGLLAEEAKRLGAALVHYSTDYVFDGTKVGAYVEDDCVNPQNV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGK KLAGE+ V + +++I RT+WVY G NFLL+MLRL ER E+SVV DQFG PT Sbjct: 129 YGKGKLAGEQAVVASGCHHLIFRTSWVYGTRGRNFLLTMLRLGAEREELSVVADQFGAPT 188 Query: 184 SALQIARAIIQIAHNLIENSDTSLR---------GIFHMTADGGPVSWADFAEYIFWESA 234 + IA AH L ++ T + G++H+TA GG SW FAE IF S Sbjct: 189 WSRTIAEL---TAHVLAQSVVTGAQQVDWWRERSGVYHLTA-GGVTSWHAFAEAIFAFSD 244 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V I + YPT A RP S L +LA T + W++ +R L Sbjct: 245 LMNKPV--VRAILSSSYPTPAVRPLNSQLSNQRLAETFGVSAPDWRDALRLCL 295 >gi|224026507|ref|ZP_03644873.1| hypothetical protein BACCOPRO_03264 [Bacteroides coprophilus DSM 18228] gi|224019743|gb|EEF77741.1| hypothetical protein BACCOPRO_03264 [Bacteroides coprophilus DSM 18228] Length = 288 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 16/292 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ + + ++ ++D+ K A++ D+++N AAYT Sbjct: 7 LITGANGQLGNEMRLLAEKNTGYHYYFTDVAELDICDEKAVAAYIEEHLIDIVVNCAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED E+ +N G +AKA S G I +STDYVFDG + P E PT P Sbjct: 67 AVDKAEDNVELCDRLNHLAPGYLAKAIQSRGGALIQVSTDYVFDGSAHVPYGEGQPTCPD 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KLAGE++ Y ++ VI+RTAW+YS FG+NF+ +MLRL KER + VV DQ GT Sbjct: 127 SVYGSTKLAGEQEALKYCSSTVIIRTAWLYSAFGNNFVKTMLRLGKERESLGVVFDQVGT 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A AI I I + G++H + + G SW DF + IF + G Sbjct: 187 PTYARDLAAAIFTILDKGI------VPGVYHFSNE-GVCSWYDFTKMIFRLA---GITSC 236 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW----KEGVRNILVN 289 +V + T +YP KA+RP YS LD + + T+ + I W +E V+ +L + Sbjct: 237 QVKPLHTCEYPAKANRPHYSVLDKTLIKETYGVEIPYWVDSLQECVQKLLTD 288 >gi|330829237|ref|YP_004392189.1| dTDP-4-dehydrorhamnose reductase subunit [Aeromonas veronii B565] gi|328804373|gb|AEB49572.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Aeromonas veronii B565] Length = 295 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/300 (38%), Positives = 162/300 (54%), Gaps = 18/300 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-------LLKPKDFASFFLSFSPDV 53 M L+ G NGQ+ L + R+ D D P A PDV Sbjct: 1 MHILLFGKNGQVGWELQRALAP---LGRITAVDFDSSDYCGDFSNPAGVAETVRLVKPDV 57 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+N AA+TAVDKAE E E A +NA AIAK A+++G ++ STDYVFDG P Sbjct: 58 IVNAAAHTAVDKAESEREFAELLNATSVAAIAKEAEALGAWLVHYSTDYVFDGRGERPWV 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PLN+YG++KLAGE+ AS + ++I RT+WVY+ G+NF +MLR KER E+S Sbjct: 118 ETDATAPLNVYGETKLAGEQG-ASLCSRHLIFRTSWVYAARGANFAKTMLRFGKERSEMS 176 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 V+ DQFG PT A +A AH + + S + G++H+ A G +W D+A+ +F + Sbjct: 177 VINDQFGAPTGAELLADC---TAHAIRVAQSKPEVAGLYHLIAS-GTTTWFDYAQLVFAK 232 Query: 233 SAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + E G +++ + T +PT A RP S LD K T ++ + W GV +L I Sbjct: 233 AREAGVELAVTQLNAVPTSAFPTPAKRPHNSRLDTGKFQRTFDLVLPEWTVGVERMLTEI 292 >gi|302382262|ref|YP_003818085.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas subvibrioides ATCC 15264] gi|302192890|gb|ADL00462.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas subvibrioides ATCC 15264] Length = 300 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 155/291 (53%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ + L+ V + R ++DL + F + +IN A Sbjct: 6 VDILVTGGAGQVGRELARTSWPGGVCLYMPTRSELDLGDADAVRALFAATPFKAVINSGA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E AF+ NA G +A+ + GIP + +STDYVFDGL E P Sbjct: 66 YTAVDKAESEVADAFAANAMGPAILAEVTKAAGIPLVQVSTDYVFDGLGEAHYAESDPVG 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE V + V+LRTAWV S +NFL +MLRLA +R + VV DQ Sbjct: 126 PLGVYGASKLAGEVAVRTGNPRSVVLRTAWVLSPHRANFLKTMLRLAADRPLVRVVDDQT 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA IA + I +I + + G++H + G +WA A IF SA GGP Sbjct: 186 GSPTSARDIADTLATITLKMIADPEAPT-GVYHFV-NAGSTTWAGLAREIFTLSAVLGGP 243 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T QYPT A RPA S L K+ + + W++ V I+ + Sbjct: 244 SAEVEGITTAQYPTPALRPANSRLSTFKITRDYGVTPRPWQDAVAEIVAEL 294 >gi|221065025|ref|ZP_03541130.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni KF-1] gi|220710048|gb|EED65416.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni KF-1] Length = 301 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 18/304 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL---------LKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R +++ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNSLCGNVGDLQTLAQTIRSVCP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAEGEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKESDATGPLSVYGRTKLEGEQRIAATNCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHMSAHEGDG--GLYHLVA-AGETNWHAYASHVI- 236 Query: 232 ESAERGGP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E A+ P + + T +PT A RP S LD KL T + + W++GV + Sbjct: 237 ERAQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERM 296 Query: 287 LVNI 290 L I Sbjct: 297 LREI 300 >gi|298290102|ref|YP_003692041.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506] gi|296926613|gb|ADH87422.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506] Length = 297 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 109/280 (38%), Positives = 151/280 (53%), Gaps = 4/280 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L++G GQ+ + ++++ VE + + +D+ + + P V+IN AAY Sbjct: 3 RVLLLGAGGQVGREIAALAPGRVESLTALDHAGLDITDASALKAALEQYRPQVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A INA G IA+A S G I+ISTDYVFDG E P P Sbjct: 63 TAVDKAESEPEKANLINAVAPGLIAQACASHGAGLIHISTDYVFDGTKAGAYVESDPVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE V + ++I+RT+WVY + G+NFL +MLRLA+ R ++VV DQ G Sbjct: 123 LGVYGASKEAGERAVRDSLDRHLIVRTSWVYGVHGANFLKTMLRLAETRDRLTVVADQTG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+ IA ++ A L T G +H+ A G +W FA I +A G + Sbjct: 183 CPTATRDIAEGLLTAAMQLATADVTP--GTYHL-AGTGVTTWHGFASVIVAHAARHTGRH 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T YPT A RPA S L + A T + W+ Sbjct: 240 VEVAPITTADYPTPARRPANSELSSALFARTVGYEAAPWQ 279 >gi|33862387|ref|NP_893947.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9313] gi|33640500|emb|CAE20289.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9313] Length = 301 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 15/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFA------SFFLSFSPDVI 54 +K L+ G GQ+ Q+L + C VE++ R LL+P D A + PD + Sbjct: 3 IKVLLTGAAGQLGQALQASCPSSVELVSTSRMGDGLLQPLDLADAQACRAAVFQHRPDWV 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVD AE EP++A ++NA A+A+ G + +STD+VF+G P Sbjct: 63 LNAGAYTAVDHAEQEPDLALAVNASAPRALAEGLLETGGRMLQVSTDFVFNGAQGHPYRP 122 Query: 115 FSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 P +PL +YG +K AGE E++ V LRT+WVY G NFLL+MLRL +ER + Sbjct: 123 NQPRDPLGVYGATKAAGEEAVEQILGAQGRAVTLRTSWVYGPVGRNFLLTMLRLHREREQ 182 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++VV DQ G PTS + +A A + + E L + H D G SW DFA I Sbjct: 183 LNVVVDQVGCPTSTITLATACWAL---MKEPQQPYLPPVLHW-CDAGAASWYDFAVAIGE 238 Query: 232 ESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +G + V I T +YPT A RP+YS LDCS+ + W+ + ++ + Sbjct: 239 LGVAKGLLQRAAVVNPIITAEYPTPAQRPSYSLLDCSETRQLLGLHACHWRVALEQVIAD 298 Query: 290 I 290 + Sbjct: 299 V 299 >gi|254804636|ref|YP_003082857.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha14] gi|254668178|emb|CBA04874.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha14] Length = 287 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 170/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|29347140|ref|NP_810643.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|253571877|ref|ZP_04849282.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29339039|gb|AAO76837.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|251838474|gb|EES66560.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 282 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 165/289 (57%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ ++ ++I+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICNKDAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E+A+ +N+E +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDDSELAYKLNSEAPKTLACAAQFNGAAMIQVSTDYVFDGTAHIPYTEECDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE +V ++ V++RTAW+YS FG+NF+ +M+RL KER + V+ DQ Sbjct: 121 CPNSVYGTTKLEGEYEVLNHCEKSVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I +RG++H + + G SW DF I + G Sbjct: 181 VGTPTYANDLAQAIFAIINKGI------VRGVYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YPT+A+RPAYS LD +K+ T I I W+E ++ + Sbjct: 231 TSCKVKPLHTAEYPTRANRPAYSVLDKTKIKTTFGIEIPHWEESLKRCI 279 >gi|221134348|ref|ZP_03560653.1| dTDP-4-dehydrorhamnose reductase [Glaciecola sp. HTCC2999] Length = 286 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 114/291 (39%), Positives = 164/291 (56%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ S + + Q++E+I G+ +D+ + F PD++IN AA Sbjct: 1 MKILIAGANGQVGSEFSQLNLDQNIELILCGKDTLDITDKRLTEQLFEHHRPDIVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE EPE AF IN G +A A + I++STDYVFDG P + N Sbjct: 61 YTAVDLAEKEPERAFLINETGCENLAIACVKYDVHLIHLSTDYVFDGTKSLPYESNDIPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG+SKLAGE+K+ + Y ILR +WV+ +G+NF+ +MLRLA+ + ++ DQ Sbjct: 121 PINVYGQSKLAGEQKIIHLLSRYTILRVSWVFGQYGNNFVKTMLRLAENNTHLEIINDQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGG 238 G PT+A IA + IA +NSD GI H + G P VSWA FAE IF + G Sbjct: 181 GGPTAANDIAMICVNIA----QNSD-RFTGILHFS--GTPFVSWAQFAEAIFRTAHIEGA 233 Query: 239 PYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S V I + Y + +RP S L S ++ +H +I W++ + I+ Sbjct: 234 IKSVPSVVPIKSIDYKSSTNRPKNSTLKTS-ISLSH-FKIINWQKSMLKIV 282 >gi|56476692|ref|YP_158281.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1] gi|56312735|emb|CAI07380.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1] Length = 298 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 152/293 (51%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ + ++I + R DL +P A+ PDVIIN AAY Sbjct: 1 MKLLVTGANGQVGWELARSLMPLGDVIALDRSRCDLSRPAALAALVDELEPDVIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + A IN G +A+ A G ++ STDYVFDG P DE P P Sbjct: 61 TAVDRAESDEAAATLINGVAPGELARVAKRRGALLVHYSTDYVFDGTKSAPYDEDDPVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG+SKLAGE + +++I RT WV++ G NF+ +MLRL ER + VV DQ G Sbjct: 121 INAYGRSKLAGELAIGESGCDHLIFRTTWVFAARGGNFVRTMLRLGAERDSLHVVADQIG 180 Query: 181 TPTSALQIARAI-IQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAER-- 236 PT A IA A + +A E S G+F++ A G SW FAE IF + + Sbjct: 181 APTWARNIADATALALARAQAERQQRSFSSGVFNL-ASRGETSWHGFAEAIFAGARAQLP 239 Query: 237 --GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + V I + YPT A RPA S L KL I + W E + L Sbjct: 240 GIGLKVAAVAPIPSSAYPTPAARPANSRLAAGKLQARFGIVMPRWDEALARCL 292 >gi|227887093|ref|ZP_04004898.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 83972] gi|227835443|gb|EEJ45909.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 83972] gi|297499071|gb|ADI43257.1| RmlD [Escherichia coli] gi|307554112|gb|ADN46887.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ABU 83972] Length = 299 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 DIPLALNKLNAVPTTAYPTPACRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|2662408|gb|AAC00179.1| putative dTDP-L-rhamnose synthase [Serratia marcescens] Length = 288 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 116/294 (39%), Positives = 164/294 (55%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + + + ++ + +D+ ++ PD IIN AAY Sbjct: 1 MRVLLTGAAGQLGRCIIDRFPANWTLVAMDSQQLDIADSAAVSATVEQLVPDAIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +INA G G +A AA + IP I+ISTDYVFDG S P E +P +P Sbjct: 61 TAVDKAESEPEKARAINAFGPGFLAAAAAKLDIPFIHISTDYVFDGTSSEPYCEETPCSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V++RTAWV+S +G+NF+ +MLR+ +R E+ VV DQ G Sbjct: 121 KSVYGQTKLEGELAALQANPKTVVIRTAWVFSEYGNNFVKTMLRVGAQRGELGVVSDQLG 180 Query: 181 TPTSALQIARAII-QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A IA +I ++H + GI+H D VSW DF IF E AE Sbjct: 181 CPTYAGDIAATVIAMLSHPQLP------YGIYHYCGDNA-VSWFDFGCAIFRE-AETSTR 232 Query: 240 YSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 Y V I T +YPT A RPAYS L SK+ ++ S W++ ++ ++ I Sbjct: 233 YPHKVSVKPIATHEYPTPASRPAYSILSTSKICAL-ALKPSPWEQQLKTVIQKI 285 >gi|320185806|gb|EFW60560.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri CDC 796-83] Length = 277 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/258 (41%), Positives = 151/258 (58%), Gaps = 11/258 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D P+ A PDVI+N AA+TAVDKAE EPE A +NA +IAK A+ +G Sbjct: 17 DFSNPEGVAETVKRIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAW 76 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I+ STDYVF G TP E T PLN+YG++KLAGE+ + + ++I RT+WVY+ Sbjct: 77 VIHYSTDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAK 136 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIF 211 G+NF +MLRLAKER E++V+ DQFG PT A +A I++A N E + G++ Sbjct: 137 GNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLY 191 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 H+ A G +W D+A +F E+ + G P + K+ + T YPT A RP S L+ K Sbjct: 192 HLVA-SGTTTWHDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQ 250 Query: 270 NTHNIRISTWKEGVRNIL 287 + + W+ GV+ +L Sbjct: 251 QNFALVLPDWQVGVKRML 268 >gi|124265820|ref|YP_001019824.1| dTDP-4-dehydrorhamnose reductase [Methylibium petroleiphilum PM1] gi|124258595|gb|ABM93589.1| dTDP-4-dehydrorhamnose reductase [Methylibium petroleiphilum PM1] Length = 298 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 164/299 (54%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M+ L++G NGQ+ L E++ + R DL P+ + PD+I+N Sbjct: 1 MRILLLGKNGQVGWELQRALAPLGELLALARDSAPLAADLGCPEALVATVRHVRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE EP +A ++NA +A+ A +G ++ STDYVFDG P DE + Sbjct: 61 AAAYTAVDRAEREPALARAVNAIAPAVLAREAAMLGATLVHFSTDYVFDGSGSAPRDESA 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P+N+YG+SKL GE + + ++ILR++WV++ GSNF ++L LA ER + +V Sbjct: 121 RTAPINVYGESKLEGEMAIRASGCRHLILRSSWVHAARGSNFAKTVLCLAAEREHLEIVD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A +A AH L + SL G +H+TA GG S +A ++ + Sbjct: 181 DQIGAPTGAELLADV---TAHALWSVRQEPSLAGTYHVTA-GGETSRHAYALFVIERARA 236 Query: 236 RGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + V + T +PT+A RP S LD +L + +R+ W+EGV +L+ + Sbjct: 237 HGHPLNVAADAVRPVPTSVFPTRARRPLNSRLDTGRLQSRFGLRLPPWQEGVERLLIEV 295 >gi|261392875|emb|CAX50456.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase; dTDP-6-deoxy-L-mannose dehydrogenase; dTDP-L-rhamnose synthetase) [Neisseria meningitidis 8013] Length = 287 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|121634552|ref|YP_974797.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis FAM18] gi|304387935|ref|ZP_07370108.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ATCC 13091] gi|120866258|emb|CAM09999.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis FAM18] gi|254671818|emb|CBA03938.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha275] gi|304338032|gb|EFM04169.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ATCC 13091] gi|308388944|gb|ADO31264.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha710] gi|316983741|gb|EFV62722.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis H44/76] gi|325197976|gb|ADY93432.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis G2136] gi|325200558|gb|ADY96013.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis H44/76] Length = 287 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|297569756|ref|YP_003691100.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] gi|296925671|gb|ADH86481.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 9/292 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++ G GQ+ L V ++ +GR +DL P + P IIN A+TAV Sbjct: 6 IIFGAEGQVGWELQRSLVLLGPLLPLGRGQVDLADPAAVRAAIRDIDPSAIINAGAFTAV 65 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE E A ++N +A ++GIP ++ STDYV+DG P E P NP ++ Sbjct: 66 DLAESEEATARAVNEVAPATMAAETRALGIPLVHFSTDYVYDGDQDGPYLETDPPNPRSV 125 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAG+E +A+ +Y+ILRT+WV++ G NFL ++LRLA ER ++VV DQFG PT Sbjct: 126 YGRSKLAGDEAIAASGADYLILRTSWVFAARGQNFLQTILRLAAERSSLTVVADQFGAPT 185 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-----G 238 +A +A + L + T+ GI+H TA G SW D+A +I E+ + G G Sbjct: 186 AAELLADVTARALPAL--QAGTASGGIYHCTA-AGETSWYDYARFIVGEAGKLGASLQLG 242 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ I T +YP A RPA S LDC +L + + W+ V+ L + Sbjct: 243 P-EQIKPISTAEYPRPAARPANSRLDCRRLEQAFGLTLPPWQFHVKRALKEL 293 >gi|310814582|ref|YP_003962546.1| dTDP-4-dehydrorhamnose reductase [Ketogulonicigenium vulgare Y25] gi|308753317|gb|ADO41246.1| dTDP-4-dehydrorhamnose reductase [Ketogulonicigenium vulgare Y25] Length = 283 Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 123/288 (42%), Positives = 166/288 (57%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L S+ E++ + R DLL P + PD IIN AA+ Sbjct: 1 MKILVFGRTGQVATELQSLVP---EVVFLDRTQADLLDPASCVTAINRHRPDAIINAAAW 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A IN + A+A+AA ++ +P I+ISTDYVF+G TP PT P Sbjct: 58 TAVDKAETEEGSAALINGDAPAAMARAAAALDVPFIHISTDYVFNGGGNTPFKPDDPTAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++K GE V + Y ILRT+WV+S G+NF+ +MLRL +R ++VV DQ G Sbjct: 118 LGAYGRTKRLGEVGVEAAGGRYAILRTSWVFSAHGANFVKTMLRLGAQRDRLNVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PTSA IA+A +++A +L + +L GI+H + G P VSWADFA I A P Sbjct: 178 GPTSARAIAQACLRMAEHLA--AAPNLSGIYHFS--GTPDVSWADFARAIM---AAAQLP 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++ I + YPT A RP S LDCS LA R W++ + +L Sbjct: 231 CT-IHDIPSTDYPTPAARPLNSRLDCSSLARFDLTR-PDWQQDLLVVL 276 >gi|265752204|ref|ZP_06087997.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_33FAA] gi|263236996|gb|EEZ22466.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_33FAA] Length = 285 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 112/283 (39%), Positives = 157/283 (55%), Gaps = 12/283 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + + E ++D+ + +F + VI+N AAYT Sbjct: 5 LVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P DE P Sbjct: 65 AVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKYLPYDEGDVPCPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +M+RL KER + VV DQ GT Sbjct: 125 SVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMIRLGKEREALGVVFDQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI+ H + + G++H + D G SW DF + I + G Sbjct: 185 PTYARDLARAILVAIHKGV------VPGVYHFS-DEGVCSWYDFTKAIHRIA---GITTC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T++I I W+E + Sbjct: 235 KVTPLHTNEYPAKAPRPHYSVLDKTKIKTTYDIGIPHWEESLE 277 >gi|282801702|gb|ADB02812.1| RmlD [Escherichia coli] Length = 299 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 9/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPDGVAETIRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 238 DIPLALNKLNAVPTTAYPTPACRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|121592968|ref|YP_984864.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. JS42] gi|120605048|gb|ABM40788.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. JS42] Length = 292 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 158/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L + +G + D +P+ A + P VI+N AA+ Sbjct: 1 MNILLLGKNGQVGWELQRSLSVLGPVTALGHDEADFTQPQAVAQAVRALRPQVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +NA G +A+ A+ +G ++ STDYVFDG TP E P Sbjct: 61 TAVDKAESEPERARLLNAATPGVLAQEAERLGALLVHYSTDYVFDGSGDTPWVETDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KL GE + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ DQ+G Sbjct: 121 LSVYGATKLEGERLIQQSGCRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVIDDQWG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A L + G++H A G +W +A+Y+ +A+ Sbjct: 181 APTGADLLADVTAHAIRQLQRRPEDG--GLYHCVA-AGETTWHAYAKYVLEHAAQVQAAI 237 Query: 241 S----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + T +PT A RP S LD ++L +T + + +W++GV +L I Sbjct: 238 EIKAKEIAPVPTSAFPTPAARPHNSRLDTARLRDTFGLTLPSWQQGVARMLTEI 291 >gi|254489469|ref|ZP_05102672.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. GAI101] gi|214041976|gb|EEB82616.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. GAI101] Length = 288 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 156/291 (53%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ + I + R DL P A+ + +PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGNGIRITALDRAAADLTDPAACAAAIDAHAPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A INA+ A+++A + IP + ISTDYVF G P P +P Sbjct: 61 TAVDKAESDHATADLINAQAPAAMSRACAARDIPFVSISTDYVFSGEGNAPWKPDDPADP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYG +K GE + Y +LRT+W S G+NF+ +MLRL ER +++V DQ G Sbjct: 121 QGIYGGTKRDGEILIEEIGGRYAVLRTSWAVSAHGNNFVKTMLRLGAEREALTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A +IA+A + IA L+ S+ GI+H + G P SWADFA IF ++ G Sbjct: 181 GPTGAAEIAQACVTIAQTLV--SEPEKAGIYHFS--GTPDTSWADFARAIF----DQAGI 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S ++CS I W+ + I+ + Sbjct: 233 TCAVTDIPSTDYPTPAKRPLNSRMNCSATTVAFGIARPDWRASLSQIIAQL 283 >gi|296313829|ref|ZP_06863770.1| dTDP-4-dehydrorhamnose reductase [Neisseria polysaccharea ATCC 43768] gi|296839557|gb|EFH23495.1| dTDP-4-dehydrorhamnose reductase [Neisseria polysaccharea ATCC 43768] Length = 287 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 173/292 (59%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G+NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGNNFVRTMLNLARERSPLSTVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|296136996|ref|YP_003644238.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12] gi|295797118|gb|ADG31908.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12] Length = 302 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 13/296 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L + ++ + R DL + P++I+N AAYT Sbjct: 5 RILLLGADGQVGWELRRALLPLGDVRPLNRTQADLGDLDALRTVLQREQPELIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTN 119 AVDKAE +PE+A INA G +A A ++ STDYVFDG P E N Sbjct: 65 AVDKAETDPELAQRINAAAPGVLAAWAAEHHAMLVHYSTDYVFDGAKPAPGSYTEADTPN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG+SKLAGE+ + + ++ILRT+WVY+ G NF +ML+LA ER + V+ DQF Sbjct: 125 PQSAYGRSKLAGEQAITASGCRHLILRTSWVYAARGGNFAKTMLKLAAERDSLRVIADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAE 235 G PTSA IA Q+ L +D +L G++H+TA G SW +A+++ + Sbjct: 185 GAPTSAELIADVTAQMLQRL--RTDPALAAQASGLYHLTAQGS-TSWHGYAQFVIAAAKA 241 Query: 236 RGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RG P V I T YP A RPA S LDCSKL T ++ + W+ V+ ++ Sbjct: 242 RGLPLRCASEHVQAITTADYPLPAPRPANSRLDCSKLQTTFDLFLPPWQTQVQRLI 297 >gi|304310332|ref|YP_003809930.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1] gi|301796065|emb|CBL44269.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1] Length = 301 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 110/295 (37%), Positives = 159/295 (53%), Gaps = 11/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G NGQ+ L E+I +G+ + DL + + +PDVI+N Sbjct: 1 MKLLIFGKNGQVGWELQRSLAPLGEVIALGQNEANLCGDLSNLEGLRATLQRVAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE EP++A+ INAE +A+ A +G ++ STDYV++G E Sbjct: 61 AAAHTAVDRAESEPDLAYRINAEAPSVMAEEAQRLGALLVHYSTDYVYEGSGERFWQESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN+YGKSKLAG++ + + ++I RT+WVY+ G+NF +ML LA+ R +SVV Sbjct: 121 APAPLNLYGKSKLAGDQAIMASGCRHLIFRTSWVYAARGNNFAKTMLGLARTRNALSVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A IA Q + + D +G++H+ A G SW D+A +F + E Sbjct: 181 DQVGAPTGAELIADVTAQAIYQAL--LDPQKQGLYHLVASGS-TSWFDYAREVFSVAREL 237 Query: 237 GGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I + +YP A RP S L KL NT + + WK GV +L Sbjct: 238 GETLQLSDDAVTPIASSEYPKPAQRPLNSRLCTQKLTNTFQLTLPDWKVGVARML 292 >gi|145298429|ref|YP_001141270.1| dTDP-4-dehydrorhamnose reductase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851201|gb|ABO89522.1| dTDP-4-dehydrorhamnose reductase [Aeromonas salmonicida subsp. salmonicida A449] Length = 295 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/297 (38%), Positives = 160/297 (53%), Gaps = 12/297 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L + + + D D P A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGSITAVDFDSSDYCGDFSNPAGVAETVRLVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVAAIAKEAEALGAWLVHYSTDYVFDGRGERPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ A ++I RT+WVY+ G+NF +MLR KER E+S++ Sbjct: 121 ATAPLNVYGETKLAGEQG-AVLCARHLIFRTSWVYAARGANFAKTMLRFGKERSEMSIIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A +A AH + + S + G++H+ A G +W D+A +F ++ E Sbjct: 180 DQFGAPTGAELLADC---TAHAIRVAQSKPDVAGLYHLIAS-GTTTWFDYARLVFAKARE 235 Query: 236 RGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD SK T N+ + W GV +L I Sbjct: 236 AGVELAVTQLNAVPTSAFPTPAKRPHNSRLDTSKFQRTFNLVLPDWTVGVERMLTEI 292 >gi|304405206|ref|ZP_07386866.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] gi|304346085|gb|EFM11919.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] Length = 299 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 156/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ L + E+ +GR ++D+ + PDV+I+ A Sbjct: 4 QRIVVTGANGQLGVDLVKHLEELGHEVHGLGRAELDVTSERQVQHTLRELKPDVVIHSGA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE EP+ A+ +N G IA AA SIG +Y+STDYVF+G P DEFSP + Sbjct: 64 YTKVDQAEAEPDQAYMVNGYGTANIASAAHSIGAKLVYVSTDYVFNGQGFRPYDEFSPID 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YGKSK GE + + + I+RT+WVY G+NF+ +ML+L ER +SVV DQ Sbjct: 124 PVNVYGKSKWMGERFIETLHARHYIVRTSWVYGAHGANFVKTMLKLGAERGSVSVVNDQV 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A I Q LIE T G +H++ + G SW +FAE IF G Sbjct: 184 GCPTFTKDLAACIGQ----LIE---TERYGTYHVS-NSGSCSWHEFAEAIF----RHAGL 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + Q+ A RP+YS D L + W+E ++ L + Sbjct: 232 QVELTAVTSDQFVRPAKRPSYSVFDHMSLRLGGFPAMRHWEEALKQFLTEL 282 >gi|325129930|gb|EGC52731.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis OX99.30304] gi|325132009|gb|EGC54708.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M6190] gi|325136020|gb|EGC58630.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M0579] gi|325137840|gb|EGC60415.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ES14902] gi|325202447|gb|ADY97901.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240149] gi|325207801|gb|ADZ03253.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis NZ-05/33] Length = 287 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|325127860|gb|EGC50766.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis N1568] Length = 287 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 170/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G+NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGNNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +F ++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFVQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|295098218|emb|CBK87308.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 299 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 113/297 (38%), Positives = 160/297 (53%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A + PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSKDYCGDFSNPEGIAETVRNIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAK A IG ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPDFAQLLNATSVEAIAKEAAKIGAWVVHYSTDYVFPGDGETPWSETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE+ + N++I RT+WVY+ G+NF +MLRLAKER+E+SV+ Sbjct: 121 ATAPLNVYGQTKLNGEKALQDNCPNHLIFRTSWVYAGKGNNFAKTMLRLAKERKELSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N + + G++H+ A SW D+A +F E A++ Sbjct: 181 DQVGAPTGAELLADCTAHAIRVAMVNPEVA--GLYHLVAS-ETTSWYDYAALVF-EEAQK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G K+ + T YPT A RP S L+ K N+ + W GV+ +L + Sbjct: 237 AGIELAIEKLNAVPTTAYPTPARRPHNSRLNTMKFQQNFNLVLPAWHVGVKRMLAEL 293 >gi|261400440|ref|ZP_05986565.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ATCC 23970] gi|269209890|gb|EEZ76345.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ATCC 23970] Length = 287 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 164/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + F++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAATFAVNASAVYNLASAAHRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII+ L++ S + +RGI+H A G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIR----LLQQS-SPVRGIYHF-AGGKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|189500819|ref|YP_001960289.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1] gi|189496260|gb|ACE04808.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1] Length = 286 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 162/290 (55%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFL---SFSPDVIINP 57 M LV G NGQ+ L + + E + D+ LL D A + D I+N Sbjct: 1 MNILVTGGNGQLGSELKELAARH-EGMTFFFYDLPLLDITDRAMVHRVCGEHAVDAIVNC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AEDEPE A+ +N +G +A+AA +++STDYVF+G S TP E Sbjct: 60 AAYTAVDRAEDEPEAAYRVNRDGPEVLAEAAKERHALLVHVSTDYVFNGESCTPYHEGDA 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK GEEK+ + +Y+I+RT+W+YS G NF+ +MLRL ER E+ VV D Sbjct: 120 VSPLGVYGQSKWEGEEKIRAIAPSYMIVRTSWLYSSHGRNFVKTMLRLGSERDELKVVFD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A A++ + + + + +H + + G SW DFA + R Sbjct: 180 QAGTPTLAADLAEALVSMLSRY--DREHTYAETYHYSNE-GVCSWYDFARAVM---RARQ 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +V + + +YPTKA RP YS LD K+ N+ I W++ + +L Sbjct: 234 LP-CRVLPVGSGEYPTKAKRPHYSVLDKGKIKEHWNLEIPHWQDSLERML 282 >gi|261364731|ref|ZP_05977614.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa ATCC 25996] gi|288567031|gb|EFC88591.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa ATCC 25996] Length = 287 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 169/289 (58%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+A + E+I +D+ + SF PD I+N AAY Sbjct: 1 MRTLLTGSKGQLAHCFRDRLPDNWELIATDSSSLDITDADAVRNMVQSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE AF++NA +A AA S+ I+ISTDYVFDG S+TP E TNP Sbjct: 61 TAVDRAETNVPAAFAVNAAAVHNLADAARSVHARFIHISTDYVFDGTSKTPYREHDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K AGE + I+RT+W++S +G+NF+ +MLRLAKER +SVV DQ G Sbjct: 121 QSVYGRTKAAGELLALAANPESTIIRTSWLFSEYGNNFVKTMLRLAKERDSLSVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A+AII L+++ S +GI+H + V+W +F++ IF + + + Sbjct: 181 CPTYAGDLAQAII----TLLQHPSPS-KGIYHFGGNKS-VTWYEFSQAIFQTALKHDNNF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T QYP A RP YS +DC K+ N + I+ S W++ + +I+ Sbjct: 235 KMPKLTPITTDQYPLPAPRPEYSIMDCRKIENDYGIKPSDWQKALNDII 283 >gi|189092402|gb|ACD75802.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] gi|288816210|gb|ADC54933.1| RmlD [Escherichia coli] gi|315285653|gb|EFU45095.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 110-3] gi|323956210|gb|EGB51961.1| RmlD substrate binding domain-containing protein [Escherichia coli H263] Length = 299 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 158/294 (53%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTNYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPDFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDAPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAS-GTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|217978849|ref|YP_002362996.1| dTDP-4-dehydrorhamnose reductase [Methylocella silvestris BL2] gi|217504225|gb|ACK51634.1| dTDP-4-dehydrorhamnose reductase [Methylocella silvestris BL2] Length = 291 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 115/279 (41%), Positives = 146/279 (52%), Gaps = 4/279 (1%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ Q L + V + ++D+ D A F P +++N AAYT Sbjct: 3 LIFGAGGQVGQELQRAAFGKGVACRALSHAEVDIADAADVARAFDETRPTLVVNAAAYTK 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E + A N G G + KA + P I+ISTDYVFDG P E P PL Sbjct: 63 VDLAETEVDAAQRANEIGPGVVGKACAARETPLIHISTDYVFDGTKTGPYVESDPLAPLG 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++K AGE +VILRT+WVY FG+NFL +MLRLA++R E+ VV DQ G P Sbjct: 123 VYGRTKAAGEAAARDAAPRHVILRTSWVYGEFGNNFLKTMLRLARDRDELRVVADQHGCP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TS IA AI++IA L +SD L G++H A G +W FA I A G Sbjct: 183 TSTRDIAAAILRIAPRLETSSD--LYGLYHF-AGVGATNWHGFASRIVEAQANITGRRPT 239 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V I T YPT A RPA S LDCS + W E Sbjct: 240 VAAITTADYPTPARRPANSVLDCSLFEKSFGFSAHNWGE 278 >gi|325133730|gb|EGC56386.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M13399] Length = 287 Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 172/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG ++P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKSPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|295675699|ref|YP_003604223.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] gi|295435542|gb|ADG14712.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] Length = 308 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 150/291 (51%), Gaps = 8/291 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L+ +I V R +DL P +I+NPAAYTAV Sbjct: 11 LVTGVNGQVGYELARTLQGLGNVIAVDRSRVDLSNLDQIREVVRDVHPALIVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E ++A IN E G +A+ A +G I+ STDYVF+G E PT+P N+ Sbjct: 71 DKAEEERDLAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFNGTKEGAYVEDDPTDPQNV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQ G PT Sbjct: 131 YGASKLAGEQAIAASGANHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQIGAPT 190 Query: 184 SALQIARAIIQIAHNLIENSDTS-----LRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 IA + D++ GI+H+ A G SW FA IF + Sbjct: 191 WCNTIATLTAHLCAQSFAADDSAKWWNERSGIYHLCA-GDSTSWHGFASAIFELADLPNK 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P I YPT A RPA S + KLA + W++ ++ L + Sbjct: 250 P--NTLPIPAADYPTPAKRPANSRMSNDKLARVFGLAAPHWRDALKLCLTD 298 >gi|86130452|ref|ZP_01049052.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134] gi|85819127|gb|EAQ40286.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134] Length = 291 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 114/298 (38%), Positives = 170/298 (57%), Gaps = 22/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSS--MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 ++ L+ G GQ+AQ+++ ++V I + + ++D+ PDVIIN A Sbjct: 8 IRLLITGGGGQVAQAINEEEATFENVTSIHLSKSELDITSTSSIKKAIDLHQPDVIINTA 67 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE++ E AF +N G +A+A GI I+ISTDYVFDG E Sbjct: 68 AYTAVDAAEEDKEKAFLVNEIGVKNLAQACKDNGIKLIHISTDYVFDGEKPEEYTEEDIP 127 Query: 119 NPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP +YGKSKLAGE+ + S +Y I+RT+WVYS++GSNF+ +MLRL + EISVV D Sbjct: 128 NPTTVYGKSKLAGEQAIINSGLLDYAIIRTSWVYSVYGSNFVKTMLRLGNVKDEISVVND 187 Query: 178 QFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 Q+G+PT A +A I+Q+++ L I+N+ G++H T + G +W FA+ +F Sbjct: 188 QYGSPTLANNLASVILQLSNVLTIQNA-----GVYHYTNE-GVTTWYAFAKAVF------ 235 Query: 237 GGPYSK----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 Y K V + + ++ TKA RP S L+ SK+ I W+E + +LV + Sbjct: 236 --SYKKMSINVLPVSSDRFVTKATRPKNSKLESSKIITLLGIENVPWEESLEKMLVKL 291 >gi|313683245|ref|YP_004060983.1| dtdp-4-dehydrorhamnose reductase [Sulfuricurvum kujiense DSM 16994] gi|313156105|gb|ADR34783.1| dTDP-4-dehydrorhamnose reductase [Sulfuricurvum kujiense DSM 16994] Length = 289 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 114/283 (40%), Positives = 156/283 (55%), Gaps = 12/283 (4%) Query: 4 LVIGNNGQIAQSLS--SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + S E GR +DL +F D IIN AYT Sbjct: 5 LVTGANGQLGSEIKKLSRLYPQYEFTFSGRETLDLGNLCKMEDYFDGKRFDAIINCGAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A +IN +AK A I+ISTDYVFDG + P E PT+P Sbjct: 65 AVDKAESEPELADTINHRFVSMLAKIAKIKKSALIHISTDYVFDGQNYRPYVETDPTDPQ 124 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG++K E + A+ N +I+RT+WVYS FG+NF+ +MLRL KER + V+ DQ G Sbjct: 125 GVYGRTKQKAENAILATAPANTLIIRTSWVYSSFGTNFVKTMLRLGKERDTLGVIYDQVG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +AR ++++ + S I+H + +G +SW DF++ IF E G Sbjct: 185 TPTYAEDLARTVLELLPKISNESPE----IYHYSNEGA-ISWYDFSKTIF----ELSGIV 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V + + QYPT+A RP YS L+ SK+ N I I WK+ + Sbjct: 236 CDVKALTSDQYPTQAKRPHYSLLNKSKIKNDFGITIPYWKDSL 278 >gi|189460858|ref|ZP_03009643.1| hypothetical protein BACCOP_01505 [Bacteroides coprocola DSM 17136] gi|189432432|gb|EDV01417.1| hypothetical protein BACCOP_01505 [Bacteroides coprocola DSM 17136] Length = 286 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 162/286 (56%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ + + + E ++D+ + +F D+I+N AAYT Sbjct: 5 LITGANGQLGNEMRLLAEVNKEYTYFFTDVAELDICDEQAVMNFVTDHQIDIIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ +N G +AKA S G + +STDYVFDG + P E T P Sbjct: 65 AVDKAEDDRELCDKLNHFAPGYLAKAIQSRGGYLVQVSTDYVFDGTAHIPYKEEQATCPD 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KLAGE++ Y +N +I+RTAW+YS FG+NF+ +M+RL KE+ + V+ DQ GT Sbjct: 125 SVYGTTKLAGEQEAMKYCSNTMIIRTAWLYSTFGNNFVKTMIRLGKEKEALGVIFDQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A AI + I + GI+H + + G SW DF + I + G Sbjct: 185 PTYARDLAVAIFAAINKGI------VPGIYHYSNE-GVCSWYDFTQMIHHLA---GIGTC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ + T++YPTKA+RP YS LD +K+ T+ I I W + ++ + Sbjct: 235 KLRPLHTEEYPTKANRPHYSVLDKTKIKETYGIEIPYWVDSLKECI 280 >gi|78188493|ref|YP_378831.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3] gi|78170692|gb|ABB27788.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3] Length = 291 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 159/289 (55%), Gaps = 9/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L ++ V+ P++D+ + + +VIIN A Sbjct: 1 MNILVTGSRGQLGSELQALSVRYPQHSFFFYDLPELDITNSEQINHICNAHHIEVIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + E AF +N++GA +A A ++ISTDYVFDG S P E P Sbjct: 61 AYTAVDKAESDAETAFRVNSDGAALLATYAKENHALLLHISTDYVFDGTSSVPYKESDPA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG+SK GEE++ + +++I+RT+W+YS++G+NF+ +MLRL ER E+ VV DQ Sbjct: 121 TPLGVYGRSKWEGEERIRAINPSHLIIRTSWLYSMYGANFIKTMLRLGGERSEVRVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ + ++ + S +H + + G SW D A + E Sbjct: 181 VGTPTWAADLAEALLSMLSSIYKGKHYS--ATYHYSNE-GVASWYDVASAVM----EMSN 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + YP A RP YS + + L + NI IS W+ + +L Sbjct: 234 LSCKVLPIESHDYPVPAPRPHYSVFNKAALKSDWNISISHWRTSLAAML 282 >gi|50882469|gb|AAT85648.1| RmlD [Escherichia coli] Length = 299 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 160/294 (54%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 VAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YGK+KLAGE + + ++I RT+WVY+ G+NF +MLR AKER E++V+ Sbjct: 121 VTAPLNVYGKTKLAGERALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRQAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A+ G +W D+A +F E A + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAN-GTTTWHDYAALVF-EEARK 236 Query: 237 GG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 AGIDLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|207744131|ref|YP_002260523.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] gi|206595535|emb|CAQ62462.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] Length = 305 Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 154/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT+A IA QI + D + G++H+ A G +W +A + + G Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAAS-GETTWHGYATAVLRYAKACGLE 248 Query: 240 YS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|255020602|ref|ZP_05292665.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC 51756] gi|254969987|gb|EET27486.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC 51756] Length = 302 Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 111/269 (41%), Positives = 155/269 (57%), Gaps = 10/269 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ ++L+ +V+ + + R +D+ A + P VIIN AAYT Sbjct: 13 RVLVTGAGGQVGRALAQTVPAEVDAVFLHRQALDVADAGSVAKALAAHRPQVIINAAAYT 72 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E + A++INA+G +A+AA +G ++ISTD+VF G P PT P+ Sbjct: 73 AVDRAESEADQAYAINAQGPAHLARAARELGAELLHISTDFVFSGSQGQPYRPEDPTAPI 132 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK+AGEE +A+ +ILRT+WVY+ +G NFL +MLRL + R + VVCDQ G Sbjct: 133 NAYGASKVAGEEAIAAILGEQALILRTSWVYAPWGQNFLQTMLRLMENRPLLRVVCDQVG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +A A+ + + D RGI H T D G SW DFA I E+ G Sbjct: 193 SPTSAHSLAGALWRA----LARPD--FRGIQHWT-DAGVASWYDFAVAIQEEALALGLLS 245 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSK 267 + + I + YPT A RPA S LD S+ Sbjct: 246 RRIPIEAIPSSAYPTPARRPANSQLDKSR 274 >gi|150002683|ref|YP_001297427.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|254882184|ref|ZP_05254894.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643256|ref|ZP_07997884.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_40A] gi|149931107|gb|ABR37805.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|254834977|gb|EET15286.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385160|gb|EFV66111.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_40A] Length = 285 Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 111/283 (39%), Positives = 156/283 (55%), Gaps = 12/283 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + + E ++D+ + +F + VI+N AAYT Sbjct: 5 LVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E P Sbjct: 65 AVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKHLPYNEGDVPCPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +MLRL KE+ + VV DQ GT Sbjct: 125 SVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMLRLGKEKETLGVVFDQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI + + + G++H +D G SW DF + I + G Sbjct: 185 PTYARDLARAIFTAIYKGV------VPGVYHF-SDEGVCSWYDFTKAIHRIA---GITTC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T+NI I W+E + Sbjct: 235 KVSPLHTNEYPAKAPRPHYSVLDKTKIKTTYNIEIPHWEESLE 277 >gi|161869700|ref|YP_001598867.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 053442] gi|161595253|gb|ABX72913.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 053442] Length = 291 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 172/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|16357462|gb|AAL18014.1| dTDP-dehydrorhamnose reductase [Aneurinibacillus thermoaerophilus] Length = 282 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 115/292 (39%), Positives = 161/292 (55%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G GQ ++ M +Q + GR ++D+ K PDV+I+ A Sbjct: 1 MKVLVTGGKGQFGYDVTQM-LQGAGHRVFSYGREELDITDQKQVQYTMEEVQPDVVIHAA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VD AE E A+ +NA G +A AA++ +YISTDYVFDG + P EF+PT Sbjct: 60 AYTKVDLAETEVNTAYKVNALGTRNVAVAAEACRAKLVYISTDYVFDGQAAGPYHEFAPT 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +IYGKSKLAGE V + + I+RT+WVY +G NF+ +MLRLA ER E++VV DQ Sbjct: 120 NPQSIYGKSKLAGESFVQQLCSRFFIVRTSWVYGKYGHNFVKTMLRLAGERDELNVVHDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + +A ++ NLIE T GI+H ++ G SW +FA IF E+ + Sbjct: 180 VGCPTYTVDLAAFVL----NLIE---TEAYGIYH-ASNTGSCSWYEFACAIFEEAEIK-- 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T +YP A RPA S + + + W+ ++ + +I Sbjct: 230 --IKVNPIPTSEYPLPAPRPANSVFEHMMIRLQEMKPLRPWRIALQEFIQDI 279 >gi|218767877|ref|YP_002342389.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis Z2491] gi|121051885|emb|CAM08191.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis Z2491] gi|254669729|emb|CBA03900.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha153] gi|319410124|emb|CBY90460.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase; dTDP-6-deoxy-L-mannose dehydrogenase; dTDP-L-rhamnose synthetase) [Neisseria meningitidis WUE 2594] Length = 287 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 172/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|294776938|ref|ZP_06742399.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] gi|294449186|gb|EFG17725.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] Length = 285 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 111/283 (39%), Positives = 156/283 (55%), Gaps = 12/283 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + + E ++D+ + +F + VI+N AAYT Sbjct: 5 LVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E P Sbjct: 65 AVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKHLPYNEGDIPCPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +MLRL KE+ + VV DQ GT Sbjct: 125 SVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMLRLGKEKETLGVVFDQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI + + + G++H +D G SW DF + I + G Sbjct: 185 PTYARDLARAIFTAIYKGV------VPGVYHF-SDEGVCSWYDFTKAIHRIA---GITTC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T+NI I W+E + Sbjct: 235 KVSPLHTNEYPAKAPRPHYSVLDKTKIKTTYNIEIPHWEESLE 277 >gi|319761362|ref|YP_004125299.1| dtdp-4-dehydrorhamnose reductase [Alicycliphilus denitrificans BC] gi|330823237|ref|YP_004386540.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans K601] gi|317115923|gb|ADU98411.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans BC] gi|329308609|gb|AEB83024.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans K601] Length = 292 Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 157/295 (53%), Gaps = 9/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L E+ +G + D +P+ A + PDVI+N AA+ Sbjct: 1 MNILLLGKNGQVGWELQRSLAVLGEVTALGHDEADFTQPQAVAQAVRALCPDVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +NA G +A+ A +G ++ STDYVFDG P E P Sbjct: 61 TAVDKAESEPERARLLNATTPGVLAEEAVRLGAWLVHYSTDYVFDGSGSRPWRETDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KL GE + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ DQ+G Sbjct: 121 LSVYGATKLEGERLIQQSGCRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVIDDQWG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PT A +A +L + G++H A GG +W +A+Y+ E A + Sbjct: 181 APTGADLLADVTAHAIRHLQQRPQDG--GLYHCVA-GGETTWHSYAKYVV-EHARQAQSA 236 Query: 240 ----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + T + T A RP S LD +KL +R+ W++GV +L I Sbjct: 237 INIIAKEIAPVPTSAFLTPARRPHNSRLDNAKLQAAFGLRLPPWQQGVARMLTEI 291 >gi|322433402|ref|YP_004210619.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] gi|321165791|gb|ADW71492.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] Length = 304 Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G+ GQ+ L + + V PD +DL P + P IINPAAY Sbjct: 5 LITGSTGQVGGELVRLFRSQNPSLEVHAPDRSQLDLRDPASIRDVVRTLLPQWIINPAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + E AF++NAE + + A IG P ++ STDYVF G + P +E P Sbjct: 65 TAVDRAESDQEDAFAVNAEAPRILGEEAAVIGAPVLHFSTDYVFAGDAERPYEETDLAKP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE +A+ ++I RT+WVY G NFL ++LR+A+++ ++ +V DQ G Sbjct: 125 LGVYGLSKLAGERNLAASGAAHLIFRTSWVYGATGKNFLRTILRVARQQPQMRIVADQHG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDT--------SLRGIFHMTADGGPVSWADFAEYI--F 230 PT+A +A+ I L E + S++GI++ T + G +W FAE Sbjct: 185 APTAARDLAQMTATIVAQLEETAGAGDLAEAIRSIQGIYNAT-NSGDTTWFGFAEEALRL 243 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +AE ++++ I T +YPT A RPA S L C KL+ T I++ W+ + +L I Sbjct: 244 RRAAEPCISFAELIPIPTAEYPTPARRPASSRLSCVKLSRTFVIQMRPWQTALGEVLKEI 303 >gi|110833772|ref|YP_692631.1| dTDP-4-dehydrorhamnose reductase [Alcanivorax borkumensis SK2] gi|110646883|emb|CAL16359.1| dTDP-4-dehydrorhamnose reductase [Alcanivorax borkumensis SK2] Length = 304 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 157/294 (53%), Gaps = 10/294 (3%) Query: 4 LVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPA 58 L++G NGQ+ L Q + + R G+ D+ PDV++N A Sbjct: 11 LLLGKNGQVGWELQRALAPFGQLIALDRAGQNGWCGDIGNLDGLRETIEHIKPDVLVNAA 70 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVD+A+ EPE+A +N + +A+ + G ++ STDYVFDG P E Sbjct: 71 GYTAVDQAQSEPELAERLNHQAPALMAELMKAHGGWLVHYSTDYVFDGSGNQPWKETDSA 130 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG +KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER ++V+ DQ Sbjct: 131 GPLNVYGATKLAGEQAIQASGCQHLIFRTSWVYASRGNNFAKTMLRLAKERDTLNVIDDQ 190 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A IA + D S G++H+ A G SW D+A Y+F + G Sbjct: 191 IGAPTGAELIADVTAHALRQWQQQPDVS--GLYHLAAS-GETSWYDYACYVFGWAQNEGL 247 Query: 239 PYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I ++ YP A RP S LD KL T N+++ WK+GV +++ + Sbjct: 248 PLAIQSVNPILSEDYPVPAIRPKNSRLDGQKLETTFNLQLPEWKQGVEHMMSEV 301 >gi|225075232|ref|ZP_03718431.1| hypothetical protein NEIFLAOT_00232 [Neisseria flavescens NRL30031/H210] gi|224953407|gb|EEG34616.1| hypothetical protein NEIFLAOT_00232 [Neisseria flavescens NRL30031/H210] Length = 287 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 165/289 (57%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +GSNF+ +MLRLAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGSNFVKTMLRLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AII + TS RGIFH + +W +F + IF + + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T +YP A RPAYS +DCS+L I+ S W++ +R IL Sbjct: 235 RIPELNAITTDKYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREIL 283 >gi|78184212|ref|YP_376647.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9902] gi|78168506|gb|ABB25603.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9902] Length = 295 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 155/296 (52%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L VE+I R ++DL + + PD ++N AY Sbjct: 1 MKILLTGTGGQLGQALLDSKPDAVELISTTRQELDLSNAEACRLAVQKYQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A +INA A A+ D G + +STD+VFDG +P PT P Sbjct: 61 TAVDQAESEPELAHAINAGAPEAFAQELDRQGGRLLQVSTDFVFDGQQGSPYRVDQPTTP 120 Query: 121 LNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 + +YG SK AGE+ + + VILRT+WV G NF +MLRL +ER ++SVV Sbjct: 121 IGVYGTSKAAGEQAIHRIFGANNPQGVILRTSWVMGPVGRNFARTMLRLHRERDQLSVVA 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G P+S L +A A + + S T+L I H + D G SW D A I Sbjct: 181 DQVGCPSSTLNLATACWT---TITQGSQTNLPPIMHWS-DAGAASWYDVAVAIGELGHSL 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +KV I T YPT A RP YS LDC+ + W+E ++ +L+ + Sbjct: 237 GLVDTPAKVNPITTADYPTPASRPNYSLLDCTTTRAALQLDGQHWQEALKQLLLRV 292 >gi|261380167|ref|ZP_05984740.1| dTDP-4-dehydrorhamnose reductase [Neisseria subflava NJ9703] gi|284797009|gb|EFC52356.1| dTDP-4-dehydrorhamnose reductase [Neisseria subflava NJ9703] Length = 287 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 116/292 (39%), Positives = 166/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +G+NF+ +ML LAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGNNFVKTMLHLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AII + TS RGIFH + +W +F + IF + + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T+QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTEQYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREILRKI 286 >gi|34499466|ref|NP_903681.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC 12472] gi|34105318|gb|AAQ61673.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC 12472] Length = 310 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 149/294 (50%), Gaps = 6/294 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPAAY 60 + L+ G NGQ+ L E+I R ++DL PD+I+NPAAY Sbjct: 6 RILITGKNGQVGHELLRALAPLGELIATDRRELDLTWDDARIEQALDQHGPDIIVNPAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA G IA+ G ++ STDYVF G P E T P Sbjct: 66 TAVDKAESDEATAHAVNACAVGVIARWTARHGALLVHYSTDYVFSGDGERPWREDDATGP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGEE + ++ILRT+WV+ G+NFL +ML+L +ER + VV DQ G Sbjct: 126 QSVYGRSKLAGEEAIRHAAPRHLILRTSWVFGAHGANFLKTMLKLGQERDSLKVVNDQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P SA IA ++ + G +H+ A G SW +A Y+ +A G P Sbjct: 186 APASAAMIADVSAELIRRYLAAPSGFAFGTYHL-APRGETSWHGYASYLLQRAASYGLPL 244 Query: 241 ----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I + YP A RPA S L C KL + I + W+ GV +L + Sbjct: 245 KIDPANIQGIPSSDYPLPAKRPANSRLSCDKLKSAFGIELPEWRSGVDQVLAQL 298 >gi|332293420|ref|YP_004432029.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter diaphorus 4H-3-7-5] gi|332171506|gb|AEE20761.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter diaphorus 4H-3-7-5] Length = 297 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 156/289 (53%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V G GQ+ +L S D E I + R D+D+ + + PDV+IN AA Sbjct: 14 KIVVTGALGQLGMALLEQSKHHADFEYIFLSRKDLDITSRDNISIVLDKHQPDVVINTAA 73 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ + AF IN G +A+ I+ISTDYVFDG T E N Sbjct: 74 YTAVDAAEDDKDQAFLINEAAVGYLAEECKKRKCALIHISTDYVFDGDKSTAYVESDKPN 133 Query: 120 PLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE+ + AS Y I+RT+WVYS++G NF+ +MLRL +ER ++SVV DQ Sbjct: 134 PQTVYGASKLGGEQLIEASNITKYAIIRTSWVYSVYGHNFVKTMLRLGEERGQLSVVNDQ 193 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A I+ +A L E+S G++H ++ G ++W DFA+ IF E Sbjct: 194 LGCPTWANDLADTILTVARELKEDS----FGVYHF-SNKGSITWYDFAKAIF----EHAQ 244 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + +PTK RP S LD K+ + W ++ +L Sbjct: 245 IDVLITPVTSDLFPTKTKRPKNSVLDTHKIEKQFKVDTPEWSSSLQKML 293 >gi|325142007|gb|EGC64440.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 961-5945] Length = 278 Score = 188 bits (477), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 114/284 (40%), Positives = 165/284 (58%), Gaps = 8/284 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H A G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQT-----SPVRGIYHY-AGGKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKA 278 >gi|224184716|gb|ACN39589.1| putative dTDP-4-dehydrorhamnose reductase [Capnocytophaga canimorsus] Length = 284 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/282 (38%), Positives = 157/282 (55%), Gaps = 10/282 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ + ++ + G D+D+ + + F + +++N A YT V Sbjct: 10 LVTGANGQLGSEIQNIQGKTKNYFFTGASDLDITDRQAISDFVKKNNIQIVVNCAGYTNV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAED+ + A IN G +A+ I+ISTDYVF G TP E PT PL I Sbjct: 70 DKAEDDIQTANLINNIAVGYLAEVCKENNASLIHISTDYVFGGTKNTPYSEADPTEPLGI 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++KL GE+ + + +Y+I+RT+W+YS+ FG+NF+ ++ RL+ ER E+ VV DQ GTP Sbjct: 130 YGRTKLEGEKAIQNADIDYLIIRTSWLYSLSFGNNFVKTIQRLSSERNELKVVFDQVGTP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T+A +A I+ I IE R ++H + + G SW DFA I S G Sbjct: 190 TNARDLAAFIVHI----IEKDLYKRREVYHFSNE-GVCSWFDFAAEIVRMS----GNDCL 240 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 V + ++P+K RP+YS LD SKL N N IS WKE ++ Sbjct: 241 VKPCLSSEFPSKVKRPSYSVLDKSKLKNDFNYTISHWKEALK 282 >gi|254253074|ref|ZP_04946392.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] gi|124895683|gb|EAY69563.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] Length = 297 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 115/288 (39%), Positives = 149/288 (51%), Gaps = 9/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+ L ++ R +DL +F P +I+NPAAYTAV Sbjct: 13 LVTGVTGQVGFELLRALQGLGRVVPCDRSMLDLSDLDRVRAFVRDLKPSLIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E E+A +N + A+ A G I+ STDYVFDG P E TNPLN Sbjct: 73 DKAESEIELARRLNVDVPRVFAEEAARSGSTLIHYSTDYVFDGTKAEPYVETDATNPLNA 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G PT Sbjct: 133 YGATKLDGEHAIAATGCAHLILRTSWVYGRRGRNFLLTMLKLGAERPELRVVADQIGAPT 192 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 A IA A I ++DT G++H+TA G SW FAE IF + R Sbjct: 193 WARTIAAATSHIVAQRAASADTDWWARRSGVYHLTA-AGATSWCGFAEAIFAMAPHR--- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + YPT A RPA S L KL T +++ W+ ++ L Sbjct: 249 -PSVVPISSDDYPTPAKRPANSRLALEKLTETFGLQMPDWRSALQLCL 295 >gi|313203691|ref|YP_004042348.1| dtdp-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] gi|312443007|gb|ADQ79363.1| dTDP-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] Length = 286 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 160/286 (55%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G++GQ+ + + I ++D+ +F + + +VI+N AAYT Sbjct: 5 LITGSHGQLGNEMQQAAARFPAFRFIYTDVEELDICDKAALDAFVKANAVNVIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ + INAE I + A G+ +++STDYVFDG + P E +P Sbjct: 65 AVDKAEDDVELCYKINAEAVRNIGEVAHQNGLKVVHVSTDYVFDGTNYMPYSEDQAVSPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGKSKLAGE+ + VILRTAW+YS FG+NF+ +M++L ER ++V+ DQ G+ Sbjct: 125 TVYGKSKLAGEQALMETCEQAVILRTAWLYSSFGNNFVKTMIKLGTERDSLNVIFDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A AI+++ + + + GI+H + D G SW DF + I G Sbjct: 185 PTYAADLADAILKLLSHPV-----FVPGIYHFS-DEGVCSWYDFTKTIH----RIAGITC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V+ I TK YP + RP YS L+ SK+ T+ I I W+E + + Sbjct: 235 DVHPIETKDYPARTPRPHYSVLNKSKIKTTYGIVIPHWEESLERCM 280 >gi|317968491|ref|ZP_07969881.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CB0205] Length = 294 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 160/296 (54%), Gaps = 17/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + C + +E+I GR ++DL + PD +IN AY Sbjct: 1 MKVLLTGAAGQLGQALMAACPEGIELIACGRQELDLADQAACRRIAQAHQPDWVINAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A ++NA A+A+A G + +STD+VF+G +P P Sbjct: 61 TAVDRAESEPELAQAVNALAPAALAQAQADHGGRLLQLSTDFVFNGQQGSPYRPEQAAEP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +K AGE V Y+ V LRT+WVY GSNF +MLRL ER ++ VV DQ G Sbjct: 121 LGVYGSTKAAGEAAVLEYSCARV-LRTSWVYGPVGSNFCRTMLRLLAEREQLGVVADQVG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS L +A+A ++ + D L+ I H + D G SW DFA I AE G + Sbjct: 180 CPTSTLGLAQACWRV----LALEDGVLQ-ILHWS-DAGAASWYDFAVAI----AELGVTH 229 Query: 241 SKVYRIF------TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R+ T YPT A RPAYS LDC +++ W+ + +L+ I Sbjct: 230 GLLTRVAQVKPIPTADYPTPAQRPAYSLLDCKATREALSLQPQHWRAALEQVLLRI 285 >gi|255321116|ref|ZP_05362282.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter radioresistens SK82] gi|255301670|gb|EET80921.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter radioresistens SK82] Length = 297 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/301 (36%), Positives = 162/301 (53%), Gaps = 18/301 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E++ + R + D+ +P ++ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVVALDRHGLNGLSGDMTQPSAIFDTIVALKPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE E + A +N + AIA A I ++ STDYVFDG T E Sbjct: 61 NASAYTAVDLAETEQDSADLVNHQTVKAIADACLQIKALFVHYSTDYVFDGAGETAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YGK+K GE+ + ++I RT+WVY+ G NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNVYGKTKALGEQAIVESGCQHLIFRTSWVYASKGKNFLKTMLNLAQQREELSII 180 Query: 176 CDQFGTPTSALQI----ARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 DQ G PTSA I A AI Q+ +D S G++H+ A G SW +A Y+F Sbjct: 181 DDQIGAPTSAELIADITAHAIPQVV------ADVSKAGVYHLVA-SGETSWFGYASYVFE 233 Query: 232 ESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ G KV I TK YPT A RP S L+ K+ + + + W++GV+ +V Sbjct: 234 QARSLGQALIVQKVNPIPTKAYPTPATRPHNSRLNNQKIQHVFKLCLPNWQDGVKRTIVE 293 Query: 290 I 290 + Sbjct: 294 L 294 >gi|261349841|ref|ZP_05975258.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM 2374] gi|288860625|gb|EFC92923.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM 2374] Length = 280 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 160/287 (55%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L+ + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLTDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ E+AFS+N EG +A P ++ISTDY+F+G + TP E P Sbjct: 61 TNVDGCEENQELAFSVNGEGVRNLAIGCREADCPLVHISTDYIFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GEE + + + I+RTAW+Y I G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTMLELAKTHDELTVVYDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT L +A AI + LIE T GI+H+T + G SW +FA+YIF E AE Sbjct: 181 TPTYTLDLAEAIGK----LIE---TDYYGIYHIT-NSGSCSWCEFAKYIF-EVAEVD--- 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ A RP+YS L+ + + + ++KE +++ L Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKRWVDNGFEPLRSYKEAIKDYL 275 >gi|209967308|ref|YP_002300223.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum SW] gi|209960774|gb|ACJ01411.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum SW] Length = 299 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 118/298 (39%), Positives = 162/298 (54%), Gaps = 21/298 (7%) Query: 2 KCLVIGNNGQIAQSLS--------SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 + L++G GQ+ +L S+ + ++ + D D L+ A+ D+ Sbjct: 5 RLLLLGGTGQVGTALRRLAPERGWSVSAPERSVLDLATADRDSLRQAVAAA-------DL 57 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AAYT VD+AE E + A + NA G G +A+ P +++STDYVFDG P Sbjct: 58 VVNAAAYTRVDQAETERDAAIAANATGPGLLARVCAEAERPLLHLSTDYVFDGSGTRPYR 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E P PL +YG SK AGE V +VILRTAWV+S G+NFL +MLRL +ER E+ Sbjct: 118 EDDPVAPLGVYGASKAAGEAAVREAGPRHVILRTAWVFSPDGNNFLRTMLRLGRERPEVR 177 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIEN--SDTS-LRGIFHMTADGGP-VSWADFAEYI 229 VV DQ G PT+A IA A + IA L + D S L G FH+ G P +W FA I Sbjct: 178 VVDDQRGCPTAADDIAAACLGIADRLAADRPDDASPLWGTFHVA--GTPATTWHGFAAAI 235 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F E+ RG P ++ I T YPT RPA+S LDC+++ + I W+ GVR L Sbjct: 236 FAEAERRGLPVPRLLPITTADYPTPTRRPAFSVLDCTRIGTVYGIAAPDWRAGVRRCL 293 >gi|320107885|ref|YP_004183475.1| dTDP-4-dehydrorhamnose reductase [Terriglobus saanensis SP1PR4] gi|319926406|gb|ADV83481.1| dTDP-4-dehydrorhamnose reductase [Terriglobus saanensis SP1PR4] Length = 308 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 161/298 (54%), Gaps = 11/298 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G+ GQ+ +L + ++ R ++DL L+ P +++P AYT Sbjct: 6 RILLTGSTGQLGAALQPLLASLGTVVAPTRSELDLSDAASIRRTMLAVRPRWVVHPGAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPEIA ++NA G + A IG I STDYVFDG P E T PL Sbjct: 66 AVDRAETEPEIAHAVNAVAPGVFGEEAKRIGAAVIAFSTDYVFDGSGSAPWKETDSTGPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KL GE +A+ ++I RT+WVYS G +FL ++ +LA+E+ ++S++ DQ G Sbjct: 126 NVYGQTKLDGERALAASGAAHLIFRTSWVYSAQGRSFLGTIAKLAREKEKLSIINDQHGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSD--------TSLRGIFHMTADGGPVSWADFAEYI--FW 231 PTSA +A + L + + + G++H A G +W DFA++I F Sbjct: 186 PTSASDLAEMTAYLVRQLEDGGEGRRAEDLVRTQSGVYH-AAGTGEATWFDFAKHIVAFG 244 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ ++++ I T +YPT A RP S LDC+KL + + W + V L + Sbjct: 245 KASYPDQTFAEILPIPTAEYPTPAKRPLNSRLDCTKLWDIFGWTMPLWTKSVDEALAS 302 >gi|152985433|ref|YP_001351218.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PA7] gi|150960591|gb|ABR82616.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PA7] Length = 302 Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 108/285 (37%), Positives = 153/285 (53%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFARTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L ++D + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDADLATRASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T YP A RPA S LD KL + + W+ Sbjct: 242 LKTEPQRVLPITTADYPVPAKRPANSRLDNRKLQQVFGLVLPDWR 286 >gi|307825028|ref|ZP_07655250.1| dTDP-4-dehydrorhamnose reductase [Methylobacter tundripaludum SV96] gi|307734075|gb|EFO04930.1| dTDP-4-dehydrorhamnose reductase [Methylobacter tundripaludum SV96] Length = 300 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/298 (36%), Positives = 158/298 (53%), Gaps = 13/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G GQ+ L E++ +G D P+ A + +PD+I+N Sbjct: 1 MKILLFGKGGQVGWELQRSLAPLGELVALGTDSQTLCGDFTNPEGIAQVVRAVAPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E+ +INA +A+ A G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESELELCRTINATTPCVLAQEAKRSGAWLVHYSTDYVFDGSGDKPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YGK+KL GEE + + ++I RT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 121 ATGPLSVYGKTKLEGEEAIRATGCQHLIFRTSWVYAARGGNFAKTMLRLARERDSLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + ++ D S G++H+ + GG SW D+A ++ ESA + Sbjct: 181 DQIGAPTGADLLADVTAHAIRSALQRPDVS--GLYHLVS-GGQTSWYDYAGFVI-ESARQ 236 Query: 237 GGPYSKV-----YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G KV + T +P A RP S LD KL NT + + W G+ +L Sbjct: 237 AGIDIKVAPEAIQPVPTSAFPLPAPRPKNSRLDTRKLQNTFGLNLPHWHSGITRMLTE 294 >gi|254432333|ref|ZP_05046036.1| dTDP-4-dehydrorhamnose reductase [Cyanobium sp. PCC 7001] gi|197626786|gb|EDY39345.1| dTDP-4-dehydrorhamnose reductase [Cyanobium sp. PCC 7001] Length = 298 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 156/293 (53%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ Q L + C V +I GR ++DL + L PD ++N AY Sbjct: 6 LTVLLTGAGGQLGQELVAQCPAGVTLIATGRSELDLADAQACRQLVLERRPDWVLNAGAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A ++NA A+A A G +++STD+VFDG +P +P Sbjct: 66 TAVDRAESEPELAEAVNAGAPQALAAALAGTGGRLLHLSTDFVFDGRQGSPYATDQLRSP 125 Query: 121 LNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 L +YG SK AGEE + + + +LRT+WVY G NF L+MLRL E+ EI VV Sbjct: 126 LGVYGASKAAGEEALLASSLLADGRVHVLRTSWVYGPVGRNFCLTMLRLHGEKEEIGVVA 185 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT+ +A A + LIE ++ L I H + D G SW DFA I E Sbjct: 186 DQVGCPTATPTLAAACWR----LIERAEVGLPDILHWS-DAGAASWYDFAVAIGELGVEL 240 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G ++V I T YPT A RP+YS LDC+ + W+E +R +L Sbjct: 241 GLLQRQARVKPITTADYPTPARRPSYSLLDCTASRTALGLEPLHWREALRQVL 293 >gi|94264208|ref|ZP_01288004.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] gi|93455383|gb|EAT05584.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] Length = 290 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 163/281 (58%), Gaps = 9/281 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ + L++ E + VGR ++D++ +FF + P ++N AAYT Sbjct: 3 RVLITGAGGQLGRELAARL--GPEQLAVGRQELDIVDGLAVKAFFKAHHPVAVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE AF +N +GA +A AA+S+ IP I+ISTD+VF G +P E PL Sbjct: 61 AVDRAESEPEDAFLVNEQGAVNLAMAAESLDIPLIHISTDFVFAGRKSSPYVESDRPAPL 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SKLAGE V + +++RT W+Y++ G NF+ ++L A+ER ++ VV DQ G+ Sbjct: 121 SVYGRSKLAGERGVLAACPRSLVIRTGWLYAVHGRNFVNTVLYYARERGQLRVVADQVGS 180 Query: 182 PTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT +A I +I A L N + IFH A+ G +W DFA I E Sbjct: 181 PTYTGDLAAVIAKILAARGLDGNKRMATSRIFHY-ANEGVATWYDFACAII----EISNL 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V + T++YPT A RP YS L+ SK+ +T + I W+ Sbjct: 236 PCIVEPVSTQEYPTVARRPPYSVLNKSKIKDTLGLVIPGWR 276 >gi|307340807|gb|ADN43867.1| RmlD [Escherichia coli] Length = 299 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 158/296 (53%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-------DLLKPKDFASFFLSFSPDV 53 M L+ G G++ L +I DI D P+ A PDV Sbjct: 1 MNILLFGKTGRVGWELQRALAPLGNLIAF---DIHSTDYCGDFSNPEGVAETVKRIRPDV 57 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+N AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP Sbjct: 58 IVNAAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWL 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E+ Sbjct: 118 ETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELE 177 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V+ DQFG PT A +A + D + G++H+ A G +W D+A +F E+ Sbjct: 178 VINDQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T Y T A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAVPTTAYLTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|15895582|ref|NP_348931.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium acetobutylicum ATCC 824] gi|15025322|gb|AAK80271.1|AE007732_5 DTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium acetobutylicum ATCC 824] gi|325509731|gb|ADZ21367.1| DTDP-4-dehydrorhamnose reductase [Clostridium acetobutylicum EA 2018] Length = 280 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 156/285 (54%), Gaps = 14/285 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + + ++VE+I D+D+ FF P+V+IN AA Sbjct: 1 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDK E++ ++A+ INA G +A AA S+G + ISTDYVFDG ++ PI EF N Sbjct: 61 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YGK+KL GE V + Y I+RTAW+Y G+NF+ +M+ L K E+ VV DQ Sbjct: 121 PQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPTS + +AR ++++ D G FH T G SW DFA IF G Sbjct: 180 GTPTSTVDLARVVLKVI-------DEKNYGTFHCTCK-GICSWYDFAVEIF----RLTGI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV T+++P A RP YS L L T WKE ++ Sbjct: 228 DVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLK 272 >gi|325144206|gb|EGC66513.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240013] gi|325203843|gb|ADY99296.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240355] gi|325206402|gb|ADZ01855.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M04-240196] Length = 287 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ II+ L+++S+ +RGI+H A G VSW +F ++IF ++++ Sbjct: 181 CPTYAGDLSATIIR----LLQHSN-PVRGIYHY-AGGKSVSWYEFVQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|77460278|ref|YP_349785.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] gi|77384281|gb|ABA75794.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] Length = 297 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 110/298 (36%), Positives = 162/298 (54%), Gaps = 12/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 M+ L++G NGQ+ L E++ + R + DL + + + PDVI+ Sbjct: 1 MRILLLGKNGQVGWELQRSLAPLGELLSLDRQTVGGLCGDLTDLEGLRATIRTVRPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE E E+ +N + A+A+ A S+G ++ STDYVF G TP E Sbjct: 61 NAAAYTAVDKAESERELVDLVNVKAVQALAEEALSLGAWLVHYSTDYVFSGEGTTPWLED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + P+N YG SK AGEE V + Y+I R +W+YS G+NF +MLRLA+ER E++V+ Sbjct: 121 AAVAPVNHYGASKFAGEEAVVASGCKYLIFRPSWIYSARGNNFAKTMLRLAREREELNVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA +++ D L G++H+ A G VSW +A+++ E A+ Sbjct: 181 NDQIGAPTGADLIADVTAHAIRQVLQRPD--LAGVYHLAA-AGEVSWHGYAQHVV-EVAK 236 Query: 236 RGGPYSKVYR---IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V I T Y T A RP S L+ KL + ++ + W+ GV +L+ + Sbjct: 237 AHGETLAVMSINPIETAAYSTPARRPRNSRLNTRKLRDNFSLHLPDWQSGVTRMLMEV 294 >gi|219670471|ref|YP_002460906.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium hafniense DCB-2] gi|219540731|gb|ACL22470.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium hafniense DCB-2] Length = 287 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 111/288 (38%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + +E V D D+ + + + + PD +I+ +A Sbjct: 1 MKILVTGVNGQLGYDVCKVLTERGLEHCGVDITDFDITDERAVKDYLIDYHPDAVIHCSA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AED+PE A +IN G IA A +G +YISTDYVF G + T Sbjct: 61 WTAVDAAEDQPEKAVAINVGGVRNIASACKVLGAKLVYISTDYVFSGFGDHFYEVDDETG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGK+KL GE V + Y I+R +W + + G+NF+ +MLRLA+ + E+SVVCDQF Sbjct: 121 PLSVYGKTKLDGEMAVKELLSCYFIVRISWAFGVNGNNFVKTMLRLAERQDEVSVVCDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + ++IE TS G +H T + G SWA+FA IF + G Sbjct: 181 GSPTYTADLAPLLC----DMIE---TSHFGTYHATNE-GICSWAEFAAEIF----KLAGR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T YPTKA RP S L KL R+ W+E + + + Sbjct: 229 AVKVNEIMTCNYPTKAVRPLNSRLSKDKLVEAGFSRLPHWREALSDYM 276 >gi|163754601|ref|ZP_02161723.1| putative dTDP-dehydrorhamnose reductase [Kordia algicida OT-1] gi|161325542|gb|EDP96869.1| putative dTDP-dehydrorhamnose reductase [Kordia algicida OT-1] Length = 284 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 164/291 (56%), Gaps = 18/291 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G NGQ+ Q + + Q +I + R D+D+ K +F + D +N AAY Sbjct: 5 LVTGANGQLGQCIQKIQPQHAKINFHFKSSR-DLDITNVKAVNDYFSNHDFDYCVNCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+ AE E E A+ +NAE A +A+A + I+ISTDYVFDG +TP E TNP Sbjct: 64 TNVELAESEEEKAYLVNAEAAKYLAEACAENNVTLIHISTDYVFDGTKKTPYVETDTTNP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG SKL GE+ + NNY I+RT+W+Y+ FG NF ++LR A+E+ +++ +Q G Sbjct: 124 ISVYGASKLKGEQNIQEIFNNYFIIRTSWLYAEFGKNFYKTILRKAEEKANLTITTEQKG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF--WESAERGG 238 TPT+A +A I++I N++ GI+H + + G +W DF + I AE Sbjct: 184 TPTNANDLAELIVEII-----NTENKNYGIYHFSNE-GEATWYDFTKEIIQNLNLAEAEK 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P K Y TKA RP YS LD +K+ N I+ +W+E ++ ++ N Sbjct: 238 PSLKP----IASYKTKAARPVYSVLDKTKVRNI--IQTISWQESLQQLMKN 282 >gi|194337310|ref|YP_002019104.1| dTDP-4-dehydrorhamnose reductase [Pelodictyon phaeoclathratiforme BU-1] gi|194309787|gb|ACF44487.1| dTDP-4-dehydrorhamnose reductase [Pelodictyon phaeoclathratiforme BU-1] Length = 292 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 9/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L + + + PD+D+ P+ A +VIIN A Sbjct: 1 MNILVTGSRGQLGSELQELSTRSDNHRFFFYDLPDLDITSPERVAELCREHEIEVIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + + AF +N +GA +A A ++ISTDYVF+G S P E P Sbjct: 61 AYTAVDKAESDVDAAFRVNRDGAAVLAACAKERNALLVHISTDYVFNGKSHIPYRETDPA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SK GEE++ ++ I+RT+W+YSI+G+NF+ +MLRL ER ++VV DQ Sbjct: 121 TPLGVYGVSKWEGEERIRDIAPSHWIIRTSWLYSIYGANFVKTMLRLGAERSTLNVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ + +N+ + G +H + + G SW DFA+ I E AE Sbjct: 181 IGTPTWAADLAGALVSMLERYDKNNHYA--GRYHYSNE-GVCSWYDFAQAIM-ELAELP- 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + QYP A RP YS L+ S + + + I W+ + +L Sbjct: 236 --CRVVPVESSQYPQIAERPHYSVLNKSAIKDEWKLEIPYWRVSLAAML 282 >gi|9957835|gb|AAG09514.1|AF279619_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L +II V D D P+ A PDVI+N Sbjct: 1 MNILLFGKNGQVGWELQRSLAPLGKIIALDVHSKDYCGDFSNPEGVAETIRRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAKAA G ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEVEFATLLNARSVEAIAKAASETGAWVVHYSTDYVFPGTGETPWCEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE+ + ++I RT+WVY+ G+NF +MLR AKER E+SV+ Sbjct: 121 ATAPLNVYGETKLTGEKALQDNCARHLIFRTSWVYAGKGNNFAKTMLRFAKEREEMSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W ++A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKQPEVA--GLYHLVA-GGTTTWYEYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K ++ + W+ GVR +L + Sbjct: 238 GIELAINKLNAVPTSAYPTPARRPNNSRLNTDKFQKKFDLVLPEWEIGVRRMLAEL 293 >gi|325140090|gb|EGC62619.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis CU385] Length = 287 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFIRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ II+ L+++S+ +RGI+H A VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSATIIR----LLQHSN-PVRGIYHY-AGSKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|212691001|ref|ZP_03299129.1| hypothetical protein BACDOR_00491 [Bacteroides dorei DSM 17855] gi|237712510|ref|ZP_04542991.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726686|ref|ZP_04557167.1| conserved hypothetical protein [Bacteroides sp. D4] gi|212666233|gb|EEB26805.1| hypothetical protein BACDOR_00491 [Bacteroides dorei DSM 17855] gi|229435212|gb|EEO45289.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453831|gb|EEO59552.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 285 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 110/283 (38%), Positives = 156/283 (55%), Gaps = 12/283 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + + E ++D+ + +F + VI+N AAYT Sbjct: 5 LVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E P Sbjct: 65 AVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKYLPYNEGDVPCPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +M+RL KE+ + VV DQ GT Sbjct: 125 SVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMIRLGKEKETLGVVFDQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +AR I + + + G++H + D G SW DFA+ I + G Sbjct: 185 PTYARDLARVIFTAIYKGV------VPGVYHFS-DEGVCSWYDFAKAIHRIA---GITTC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T+NI I W+E + Sbjct: 235 KVSPLHTNEYPAKAPRPHYSVLDKTKVKTTYNIEIPHWEESLE 277 >gi|119898167|ref|YP_933380.1| dTDP-4-dehydrorhamnose reductase [Azoarcus sp. BH72] gi|119670580|emb|CAL94493.1| dTDP-4-dehydrorhamnose reductase [Azoarcus sp. BH72] Length = 296 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 111/295 (37%), Positives = 159/295 (53%), Gaps = 11/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E++ + R D L +P++ + +P VI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVLALDRHGSDGLCGDLSRPEELGDTVRAVAPQVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AAYTAVDKAE + +A INA+ +A+ A +G ++ STDYVFDG TP E Sbjct: 61 IAAAYTAVDKAESDAALAQRINADAVAELARQATQLGALLVHYSTDYVFDGSGSTPWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +P PL++YG +KLAGE + + ++I RT+WVY+ G NF +MLRLA ER + VV Sbjct: 121 APVAPLSVYGTTKLAGETAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAAERDTLKVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA I +++ L G +H+ A G SW +A ++ ++A Sbjct: 181 ADQIGAPTGADLIADVTAHAIRACIPSAN-DLSGTYHLAA-AGETSWHGYACHVI-DTAR 237 Query: 236 RGGPYSKVYRI---FTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 R G KV I + YPT A RPA S LD + L T + + W+ GV +L Sbjct: 238 RLGHPLKVGLIEPLASADYPTPARRPANSRLDTALLRTTFALNLPDWRSGVDRML 292 >gi|148643364|ref|YP_001273877.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii ATCC 35061] gi|148552381|gb|ABQ87509.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii ATCC 35061] Length = 280 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 160/287 (55%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L+ + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLTDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ ++AFS+N EG +A P ++ISTDYVF+G + TP E P Sbjct: 61 TNVDGCEENQKLAFSVNGEGVRNLAIGCREADCPLVHISTDYVFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GEE + + + I+RTAW+Y I G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTMLELAKTHDELTVVYDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT L +A AI + LIE T GI+H+T + G SW +FA+YIF E AE Sbjct: 181 TPTYTLDLAEAIGK----LIE---TDYYGIYHIT-NSGSCSWCEFAKYIF-EVAEVD--- 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ A RP+YS L+ + + + ++KE +++ L Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKRWVDNGFEPLRSYKEAIKDYL 275 >gi|317403268|gb|EFV83786.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54] Length = 304 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LVIG +GQ+ L + VGR D DL P A PDVI+N AA+T Sbjct: 4 KILVIGRDGQLGFELRRSLAPLGVVTAVGRADCDLTYPLQIARLVRREKPDVIVNAAAFT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AV++A+++ A INAE AG ++ A G ++ S+DYVFDG DE PL Sbjct: 64 AVERAQEDGVRAMRINAEAAGELSALAAERGALIVHYSSDYVFDGAKPGAYDERDTPAPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE+ V + +++ RT+WVY +FG++FL +ML ++ + VV DQ G Sbjct: 124 NVYGRSKLAGEQAVRAMNPAHLVFRTSWVYGVFGNSFLKTMLMALRQPETLRVVSDQRGA 183 Query: 182 PTSALQIARAI-IQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT A IA A + +A L +D + G++H+ A G SW ++A +I + A R G Sbjct: 184 PTGAAYIADATALVLARYLARPADEAFPFGLYHLAATGD-ASWHEYACFIA-QQARRAGL 241 Query: 239 ----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + + QYPT A RP S LD L T IR W++GV + L I Sbjct: 242 AVTLTPADIRAVPSDQYPTTARRPLNSRLDSRLLERTFGIRAPHWEDGVTHALAAI 297 >gi|222054967|ref|YP_002537329.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221564256|gb|ACM20228.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 276 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G G + Q L ++ + + DID+ + + P V+IN AAYT V Sbjct: 3 LIVGAKGMLGQDLMALFGPGARGVDL--EDIDITSLESVQKVLFTIRPRVVINAAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E E A +N EG +A A IG + +STDYVFDG +P E PT PL++ Sbjct: 61 DGCETNQEPAMQVNGEGVAHLALATSEIGAKLVQVSTDYVFDGGKGSPYLEDEPTAPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE A + ++VI+RT W+Y I G NF+ +MLRLA E+RE++VV DQ G+PT Sbjct: 121 YGESKLAGEMN-ARFNPDHVIVRTQWLYGINGKNFVETMLRLATEKRELAVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + +A AI L+E RGI+H A+ G SW +FA IF ES G V Sbjct: 180 WTVDLALAI----KALVEK---DCRGIYH-AANAGFCSWNEFARAIFAES----GLDVTV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + TK A RP YS LDC KL + W+E +++ L Sbjct: 228 NPMSTKDLGRPAPRPLYSTLDCGKLTRDTGFQPQPWREALKHYL 271 >gi|257792903|gb|ACV67280.1| RmlD [Escherichia coli] Length = 299 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKIGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G + D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GIHNLHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLSAVPTTAYPTPARRPHNSRLNTEKYQQNFALVLPDWQVGVKRML 290 >gi|329113804|ref|ZP_08242575.1| Putative dTDP-4-dehydrorhamnose reductase [Acetobacter pomorum DM001] gi|326696814|gb|EGE48484.1| Putative dTDP-4-dehydrorhamnose reductase [Acetobacter pomorum DM001] Length = 312 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 4/288 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A SL ++ + VGRPD D +P+ + + P ++N AA+TAV Sbjct: 23 LVTGGKGQLATSLVNLGGPRIRC--VGRPDFDFDRPETLKATLDAIKPVAVVNAAAWTAV 80 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EPE A N G +A+ GIP I++STDYVF G P E P +P + Sbjct: 81 DLAESEPEAAARANTTGPELLARLCAERGIPFIHVSTDYVFAGDKGAPYVETDPVSPQTV 140 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K GE+++ + +ILRT+WVYS G NF+ +ML + + + VV DQ G PT Sbjct: 141 YGSTKAEGEQRILAADPRSIILRTSWVYSAHGKNFVRTMLNVGAKNPALKVVGDQRGNPT 200 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 + +A+AI+ I + + GI+H G +W AE ++AE G Sbjct: 201 CSDDLAQAILSILATIEKTGWKDEYAGIYHACGT-GETTWHGLAEAALQKAAEYGQAKPT 259 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ +PT A RPA S +D SKLA+ I++ W+E V ++ I Sbjct: 260 ITAIRTEDWPTPAKRPADSRMDNSKLAHVFGIQMPQWQESVNKVVHQI 307 >gi|296392017|ref|ZP_06881492.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAb1] Length = 302 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLIRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWR 286 >gi|254243957|ref|ZP_04937279.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 2192] gi|126197335|gb|EAZ61398.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 2192] Length = 302 Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPITTEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWR 286 >gi|313110225|ref|ZP_07796121.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 39016] gi|310882623|gb|EFQ41217.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 39016] Length = 302 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPITTEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWR 286 >gi|160896723|ref|YP_001562305.1| dTDP-4-dehydrorhamnose reductase [Delftia acidovorans SPH-1] gi|160362307|gb|ABX33920.1| dTDP-4-dehydrorhamnose reductase [Delftia acidovorans SPH-1] Length = 300 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 15/302 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--------DLLKPKDFASFFLSFSPD 52 MK L++G NGQ+ L E+I + R DL + + A + PD Sbjct: 1 MKLLLLGRNGQVGWELQRSLAPLGELIALDRQGDAGGQGLCGDLSRLDELARTVRALRPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EP+ A +NA +A+ A IG ++ STDYVFDG Sbjct: 61 VIVNAAAHTAVDKAESEPDQARLLNALAPQVLAREAAQIGALLVHYSTDYVFDGSGSAAR 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YG SKL GE+ + + ++I RT+WVY+ G NF +MLRLA+ER + Sbjct: 121 TETEATAPLSVYGSSKLEGEQLIQASGCRHLIFRTSWVYAARGGNFAKTMLRLAQEREAL 180 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 SV+ DQ+G PT A IA L +G++H+ A GG +W +A+++ + Sbjct: 181 SVIDDQWGAPTGADLIADVTAHAIRQLQRQPGD--QGLYHLVA-GGETTWHAYADHVIAK 237 Query: 233 SAERGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + E + ++ + T +PT A RP S L+ +L T +R+ W+ GV +L Sbjct: 238 ARELAPEHPWMVQRIAAVPTSAFPTPAQRPHNSRLNTERLQQTFGLRLPHWQAGVDRMLQ 297 Query: 289 NI 290 I Sbjct: 298 EI 299 >gi|116053309|ref|YP_793633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa UCBPP-PA14] gi|115588530|gb|ABJ14545.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa UCBPP-PA14] Length = 302 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWR 286 >gi|83950200|ref|ZP_00958933.1| dTDP-4-dehydrorhamnose reductase [Roseovarius nubinhibens ISM] gi|83838099|gb|EAP77395.1| dTDP-4-dehydrorhamnose reductase [Roseovarius nubinhibens ISM] Length = 277 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 106/280 (37%), Positives = 155/280 (55%), Gaps = 9/280 (3%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 +A+ + + + EI+ +GR D P + P+ +IN AYTAVD+AE++ Sbjct: 1 MAREVQARAPEGWEIVALGRDAADFTNPLATLAALKRARPEAVINAVAYTAVDRAEEDEA 60 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 +A +N G +A ++G+P +++STDYVF G P T P N YG+SKLAG Sbjct: 61 LAQQVNGATPGLLAAECAAMGVPFVHLSTDYVFAGSGVAPYAPADATAPQNAYGRSKLAG 120 Query: 132 EEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARA 191 EE V + +VILRT+WV+S G+NF+ +MLRL ER +++V DQ G PT A IA A Sbjct: 121 EEAVRAAGGPHVILRTSWVFSSHGANFVKTMLRLGAERDRLTIVADQIGGPTPARAIAAA 180 Query: 192 IIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 ++IA L +++ S G +H + G P VSWA+FA IF ++ G +V I T Sbjct: 181 CLRIAERLYKDAGQS--GTYHFS--GIPEVSWAEFAREIFAQA----GISCEVVDIPTSD 232 Query: 251 YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 YPT A RP S LDC I W+ G+ +L ++ Sbjct: 233 YPTPAQRPLNSRLDCRATETVFGIARPDWRVGLAEVLDDL 272 >gi|154493894|ref|ZP_02033214.1| hypothetical protein PARMER_03238 [Parabacteroides merdae ATCC 43184] gi|154086154|gb|EDN85199.1| hypothetical protein PARMER_03238 [Parabacteroides merdae ATCC 43184] Length = 288 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 11/290 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + + +D+ + +F D IIN AAYT Sbjct: 5 LVTGANGQLGNSIRRLAAGYPQYAFVFTDVDTLDICDAQAVNAFVKEKQVDYIINCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ + IN + + +AA G I++STDYVFDG + P E T P Sbjct: 65 AVDKAEDDEALCLRINRDAVRNLGEAARMAGARVIHVSTDYVFDGTNHLPYVETDNTCPA 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ + + VI+RTAW+YS FG+NF+ +MLRL ER ++SVV DQ G+ Sbjct: 125 SVYGRTKLAGEQALQEVCPDAVIIRTAWLYSEFGNNFVKTMLRLGNEREQLSVVFDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AI + L++ +D + GI+H + + G SW DFA I E G Sbjct: 185 PTYAGDLAAAIFAV---LVQAEADAFVPGIYHYSNE-GVCSWYDFAVKIM----ELGNAP 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I +K YP KA RP +S L+ +K+ + I IS W+ +R + I Sbjct: 237 CRVLPIESKDYPAKAARPHFSVLNKAKIKTIYKISISHWEASLRECMKRI 286 >gi|91789861|ref|YP_550813.1| dTDP-4-dehydrorhamnose reductase [Polaromonas sp. JS666] gi|91699086|gb|ABE45915.1| dTDP-4-dehydrorhamnose reductase [Polaromonas sp. JS666] Length = 308 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 17/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP----KDFASFFLSFSPDVIIN 56 MK L+ G NGQ+ L E+ + R DL + A+ PDVI+N Sbjct: 1 MKILLFGKNGQVGWELQRSLAPLGELTALDRHSTDLCGDLGNLQGLAATVQQLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP +A ++NA +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPALARTLNALAPSVLAQEAARLGSLLVHYSTDYVFDGSGTRPWTEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG+SKL GE+ + + + ++I RT+WVY+ G NF +MLRLA+ER + V+ Sbjct: 121 TPAPLSVYGQSKLEGEQLIQAASPRHLIFRTSWVYAARGGNFAKTMLRLAQERERLIVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A +++ + G++H+ A G SW +A+Y+ + AER Sbjct: 181 DQFGAPTGAELLADVSAHAIRQVLQRPADA--GLYHLVAS-GETSWHGYAKYVLAQ-AER 236 Query: 237 GGPYSKVY---------RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + T +PT A RP S LD ++L T + + W++GV +L Sbjct: 237 SQEQGRVAIKIIAKAVDPVPTSAFPTPAKRPHNSRLDTTRLQTTFGLTLPPWQQGVDRML 296 Query: 288 VNI 290 + Sbjct: 297 EEV 299 >gi|89056333|ref|YP_511784.1| dTDP-4-dehydrorhamnose reductase [Jannaschia sp. CCS1] gi|88865882|gb|ABD56759.1| dTDP-4-dehydrorhamnose reductase [Jannaschia sp. CCS1] Length = 281 Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 159/291 (54%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L G GQ+AQ L+ + V+ +GR + DL P+ A + IIN AAY Sbjct: 1 MSLLAFGQTGQVAQELARLGVR-----TLGRAEADLSNPQACADVIAASDATAIINAAAY 55 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A +INA+ A+A A + IP ++ISTDYVFDG P P Sbjct: 56 TAVDRAEEEEALAHTINADAPAAMAVACKAKNIPLVHISTDYVFDGQGTQSFRPSDPVAP 115 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++KLAGE+ V + Y +LRT+WV+S G+NF+ +MLRL +R +++V DQ G Sbjct: 116 LGAYGRTKLAGEDAVRASGATYGVLRTSWVFSAHGANFVKTMLRLGADRDALTIVADQVG 175 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PTSA IA A + +A L + S G +H + G P VSWADFA IF E+ Sbjct: 176 GPTSARAIAWACVTVADALQGAPEKS--GTYHFS--GAPDVSWADFARAIFAEADLN--- 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ + W+ + + L +I Sbjct: 229 -VAVTDIPSSDYPTPAVRPLNSRLDCAATEAAFGVPRPDWRADLGDALADI 278 >gi|157376143|ref|YP_001474743.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] gi|157318517|gb|ABV37615.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] Length = 303 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 112/297 (37%), Positives = 159/297 (53%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L +EII ++D+ ++ SPD+IIN AAY Sbjct: 1 MKVLVTGKGGQLAWELEQTTPSYIEIISFSANELDITNQAQVNEVVIAHSPDIIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A+++N +G+ +A I I+ISTD+VFDGL TP NP Sbjct: 61 TAVDKAETDKETAYAVNEKGSEYLALICKEISAKLIHISTDFVFDGLKNTPYQTDDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG SKL G+ KV + +I+RT W+YS G+NF+ +MLRL E+ ++ ++ DQ Sbjct: 121 VNVYGDSKLQGDIKVNNLLGCQAIIIRTGWMYSENGNNFVKTMLRLMVEKEQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQI--AHNLIENSD-----TSLRGIFHMTADGGPVSWADFAEYIFWE 232 GTPT A +A I + H+ IE D TS I+H T D G SW DFA I Sbjct: 181 GTPTWAKGLAEMIWALISRHSGIEERDIRNLSTSSAQIYHWT-DAGVASWYDFAVAIQEL 239 Query: 233 SAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + E+G V I YPT A RP++S +D + + W++ + +L Sbjct: 240 AIEKGMLDKAIPVRPIPASAYPTPAQRPSFSVIDKTTAEQASRVETKHWRKQLSAML 296 >gi|96667|pir||S23348 hypothetical protein 5.2 - Salmonella choleraesuis gi|431939|emb|CAA43073.1| dTDP-6-deoxy-L-mannose dehydrogenase [Salmonella enterica] Length = 248 Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 103/247 (41%), Positives = 149/247 (60%), Gaps = 11/247 (4%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PDVI+N AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G Sbjct: 2 LRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTG 61 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P E T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKE Sbjct: 62 DIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKE 121 Query: 169 RREISVVCDQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 R+ +SV+ DQ+G PT A +A I++A N E + G++H+ A GG +W D+ Sbjct: 122 RQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVA-GGTTTWHDY 175 Query: 226 AEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A +F E+ + G +++ + T YPT A RP S L+ K ++ + W+ GV Sbjct: 176 AALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGV 235 Query: 284 RNILVNI 290 + +L + Sbjct: 236 KRMLTEM 242 >gi|255533798|ref|YP_003094170.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] gi|255346782|gb|ACU06108.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] Length = 284 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 162/287 (56%), Gaps = 14/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 MK LV+G +GQ+ Q L + + I + PD ++L + F P +IN Sbjct: 1 MKILVLGASGQLGQCLKKVAAER-NISNISFPDESKANILDTALLQTLFTEEMPTHVINC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ IN +GA IA I++STD+VF G + E Sbjct: 60 AAYTAVDKAEDDVELCRKINKDGALNIAGLCKENKATLIHVSTDFVFKGDKPELLKEDDL 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P+NIYG +KL GE+ V + + ILRT+W+YS + +NF+ +MLRL +R ++V+ D Sbjct: 120 AEPINIYGLTKLEGEQDVINNLKEHFILRTSWLYSEYANNFVKTMLRLGADRDVLNVIAD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A+ +A AI+ I IE+ G++H + + G SW DFA IF E G Sbjct: 180 QIGTPTYAIDLAGAILSI----IESGQKDY-GVYHYSNE-GVTSWYDFAVGIF----ELG 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G KV I T QYPTKA RP +S +D +K+ +T + I W++ ++ Sbjct: 230 GTKIKVKPISTSQYPTKAIRPKFSVMDKTKIKSTFGLEIPYWRDSLQ 276 >gi|226941909|ref|YP_002796983.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9] gi|226716836|gb|ACO75974.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9] Length = 294 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 156/293 (53%), Gaps = 10/293 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G NGQ+ L E++ + R + DL +P +F P +I+N AA+T Sbjct: 5 RILLTGANGQVGFELRRALAPLGEVLAITRHEADLQQPSSILPLLDAFRPRLIVNAAAWT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE +P+ A+ +NA G +A+ A ++ STDYVFDGL+ P DE P +PL Sbjct: 65 AVDLAEQQPDAAWQVNAVLPGVLAQWAADRQARLVHYSTDYVFDGLASRPYDETDPAHPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK AGEE V VI+RT+WV+ G NFL ++LRLA ER ++++V DQ G Sbjct: 125 SVYGQSKWAGEEAVRVAGGAPVIVRTSWVFGAHGHNFLKTVLRLAAEREQLAIVADQTGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG---- 237 PT A IA + + + T +H+ A G SW +A + + G Sbjct: 185 PTPASLIADVTAHLVRHWPDEGAT-----YHL-AGQGETSWHGYACEVVRIARALGWSLR 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I T YP A RPA S LDC K+ + + W+ GVR +L ++ Sbjct: 239 ATETAIRPIATSDYPLPAVRPANSRLDCRKIQADLQLWLPDWQSGVRQVLASL 291 >gi|312115796|ref|YP_004013392.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC 17100] gi|311220925|gb|ADP72293.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC 17100] Length = 299 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 155/281 (55%), Gaps = 3/281 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ L+ + D +R R ++DL + ++ + P IIN YT Sbjct: 7 LITGGSGQLGLELARLPWPDGLRLRTPDRSELDLSSTESITAYIDACRPLAIINAGGYTQ 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE +P AF +NA G AIA+AA G I+ISTDYVFDG DE +PL Sbjct: 67 VDGAESDPLTAFCLNAMGPAAIAEAARRHGSRLIHISTDYVFDGSRHGFYDESDAVSPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK AGE+ V + VI+RTAW++S + +NF+ +MLR+ +ER + +V DQFG P Sbjct: 127 VYGASKEAGEQAVRAILPGSVIVRTAWLFSPYRTNFVKTMLRIGRERPSVRIVADQFGCP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T+A +ARA+ IA L+E+ + G FH +GG +W A F ++ G Sbjct: 187 TAASDLARALQTIAMRLVEDP-AAPTGTFHFV-NGGEATWYALACEAFAQATRYGYTAPA 244 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I T +YPT A RPA S L ++L ++ I WK V Sbjct: 245 VAPISTAEYPTPARRPANSRLSVARLTESYAITPRPWKLAV 285 >gi|107104263|ref|ZP_01368181.1| hypothetical protein PaerPA_01005337 [Pseudomonas aeruginosa PACS2] gi|218894262|ref|YP_002443132.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa LESB58] gi|218774491|emb|CAW30308.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa LESB58] Length = 302 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 152/285 (53%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAGCGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L + + + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDVELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWR 286 >gi|295110611|emb|CBL24564.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum A2-162] Length = 282 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ ++ + + E + V ++D+ PD +++ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGYEGVGVDVAEMDITDSAAVEKVMTEVHPDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT- 118 +TAVD AED E+ +N +G IAK + IP +YISTDYVFDG P + P Sbjct: 61 WTAVDAAEDNQEVCHRVNVDGTANIAKMCGKLDIPMVYISTDYVFDGQGTRPWEPDDPVV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG SK GE V Y +Y I+R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 EPLNVYGHSKYEGEVAVEKYAPHYYIVRIAWVFGLNGKNFIKTMLNLGKTHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ +++E + G +H T +GG +SW DFA+ IF + G Sbjct: 181 IGTPTYTYDLARLLV----DMLEKEE---YGKYHATNEGGYISWCDFAKEIF----RQAG 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP+ S ++ KL R+ WK+ + L I Sbjct: 230 MDVKVMPVSSAEYPAKAKRPSNSRMEKKKLEEHGFTRLPDWKDALGRYLKEI 281 >gi|15600355|ref|NP_253849.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAO1] gi|9951464|gb|AAG08547.1|AE004929_2 dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAO1] gi|27262964|emb|CAC82200.1| dTDP-4-keto-L-rhamnose reductase [Pseudomonas aeruginosa] Length = 302 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 153/285 (53%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L + + + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLCWDVELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWR 286 >gi|260220292|emb|CBA27684.1| dTDP-4-dehydrorhamnose reductase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 301 Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 168/305 (55%), Gaps = 22/305 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK-PKDFASFFL----------SF 49 MK L++G GQ+ L E++ + D D + P+ F + Sbjct: 1 MKILLLGRGGQVGWELQRSLGVLGEVVAL---DFDANQNPQGLCGDFTDIDGLERTVEAV 57 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PDVI+N AA+TAVDKAE EPE+A +INA A+A+AA G ++ STDYVFDG Sbjct: 58 QPDVIVNAAAHTAVDKAESEPELARTINALAPAALARAAIKTGAWLVHYSTDYVFDGSGN 117 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P E T PL++YG++KL GE+ VA+ ++ILRT+WVY+ G NF +MLRLA ER Sbjct: 118 APWKETDATGPLSVYGQTKLEGEQAVAT-CPKHLILRTSWVYATRGGNFAKTMLRLAGER 176 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++V+ DQFG PTSA +A +L + L G++H A G +W +A+++ Sbjct: 177 DALTVINDQFGAPTSAELLADVTAHAIRSL--QTRPELAGLYHCIA-AGETTWHGYAQHV 233 Query: 230 FWESAERGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++A G P KV T YPT A RP S LD +KL +++ W++GV+ Sbjct: 234 LEQAATLGLPLKATAGKVAPTATSNYPTPAKRPLNSRLDTTKLQAAFGLKLPHWQDGVKR 293 Query: 286 ILVNI 290 +L+ I Sbjct: 294 MLIEI 298 >gi|296505691|ref|YP_003667391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis BMB171] gi|296326743|gb|ADH09671.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis BMB171] Length = 284 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 159/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + Q +E+ +G D+D+ F + PD II+ AA Sbjct: 1 MKILVTGYNGQLGYDVVKRGEKQGLEMQGIGIEDLDITNEAAVYEFVDNVKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDK+ED+ E+ +++N EG +A AA + +YISTDYVFDG E N Sbjct: 61 YTAVDKSEDDKELCWNVNVEGTKYLATAAKKLNAKFVYISTDYVFDGEGTHAFVETDGPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GE+ V S +N I+R +WV+ I G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVGYYGLTKYEGEKVVKSLIDNNFIVRISWVFGINGNNFIKTMLRLGETRNELNVVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SWA+FA+ IF E G Sbjct: 181 GSPTYTYDLARLLVDMVV-------TEKYGTYHATNE-GFCSWAEFAQEIF----EIAGQ 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT+A RP S + KL + + WK+ ++ + + Sbjct: 229 DVKVNSITTEEYPTRAVRPKNSRMSKQKLIDNGFEPLQDWKKATKHYITQL 279 >gi|251780332|ref|ZP_04823252.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084647|gb|EES50537.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 287 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 107/282 (37%), Positives = 154/282 (54%), Gaps = 13/282 (4%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ + + +++E I R ++D+ + + + P+ +I+ AAYTA Sbjct: 3 LVTGVNGQLGYDVIKELKKRNIECIGTTRKELDITNYNEVSKYIEELKPECVIHCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAEDE EI +N G IAK I IYIS+DYVFDG P + NPL+ Sbjct: 63 VDKAEDEEEICTKVNVYGTENIAKVCRRINAKMIYISSDYVFDGAGDKPHEIDETPNPLS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK GE KV SY Y I+RT+WV+ + GSNF+ +ML+L KE+ ++VVCDQ G+P Sbjct: 123 VYGSSKYNGELKVKSYLKKYFIVRTSWVFGLNGSNFVKTMLKLGKEKESLNVVCDQIGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A+ + +A + GI+H T + G SWA+FA+ I + K Sbjct: 183 TYTADLAKLLCDMAV-------SEKYGIYHAT-NHGFCSWAEFAKEIM----KIANLNCK 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + I T +Y TKA RP S L L + +S WK ++ Sbjct: 231 INYISTNEYKTKAIRPLNSRLSKKSLLDNGFNELSIWKSSLK 272 >gi|198282743|ref|YP_002219064.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665614|ref|YP_002424938.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247264|gb|ACH82857.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517827|gb|ACK78413.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 289 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 121/292 (41%), Positives = 158/292 (54%), Gaps = 13/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ L VE+ +GRPD+D+L SF PD IIN AAYT Sbjct: 3 RVLLLGAQGQVGWELQRSRPASVELRALGRPDLDILDAAQVLGMAESFRPDAIINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E A+++N +GA A AA + G I++STD+VFDG TP +P PL Sbjct: 63 AVDRAESESARAYAVNRDGAAHCALAAQACGARLIHLSTDFVFDGAQATPYPPEAPLAPL 122 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SK GE +V A + +ILRTAWVYS GSNF+ +MLRL ER + VV DQ G Sbjct: 123 GVYGASKADGERQVQAILGDTALILRTAWVYSAHGSNFVKTMLRLMAERDVLRVVGDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +ARAI + GI H T D G SW DFA I E+ G + Sbjct: 183 TPTWAAGLARAIWSTLDH------PGFTGIQHWT-DAGVASWYDFAVAIQEEAVAAGRLH 235 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-WKEGVRNILVN 289 + I T YPT A RPA + LD K A+ + + W+ +R +L Sbjct: 236 RAIPIEMIPTSAYPTPARRPACAILD--KTASYTALGAAPHWRTALRRMLTE 285 >gi|15676654|ref|NP_273798.1| putative dTDP-L-rhamnose synthase [Neisseria meningitidis MC58] gi|7225985|gb|AAF41169.1| putative dTDP-L-rhamnose synthase [Neisseria meningitidis MC58] Length = 306 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 114/286 (39%), Positives = 168/286 (58%), Gaps = 8/286 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFIRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ II+ L+++S+ +RGI+H A VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSATIIR----LLQHSN-PVRGIYHY-AGSKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALH 280 >gi|255068240|ref|ZP_05320095.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca ATCC 29256] gi|255047510|gb|EET42974.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca ATCC 29256] Length = 288 Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 171/289 (59%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+A+ ++ E+I +D+ + + +F PD I+N AA+ Sbjct: 1 MRTLLTGSKGQLARCFRDRLPENWELIATDSTSLDITDTEAVRNMVQNFQPDAIVNAAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA + I+ISTDYVFDG ++TP E TNP Sbjct: 61 TAVDKAEAHVGTAFAVNATAVHNLASAARACQARFIHISTDYVFDGTNKTPYKEQDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K++GE + + VI+RT+W++S +G+NF+ +M+RLA ER +S+V DQ G Sbjct: 121 QSVYGRTKVSGELLALAANPDSVIIRTSWLFSEYGNNFVKTMIRLAGERDNLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A+AII + + + RGI+H + V+W +FA+ IF + ++ + Sbjct: 181 SPTYAGDLAQAIITLLQQPV-----APRGIYHYGGNKS-VTWYEFAQAIFQAAQQQDPDF 234 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T QYP A RPAYS +DC K+ I+ S W++ + I+ Sbjct: 235 KIPQLNAITTDQYPLPAPRPAYSIMDCQKIEKECGIKASDWQKALNEII 283 >gi|168481428|gb|ACA24907.1| RmlD [Shigella dysenteriae] Length = 299 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 113/296 (38%), Positives = 163/296 (55%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ + I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVSAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W ++A IF E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWYEYASLIFSEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + K+ I T YPT A RP S L+ K ++ + W GV+ ++ Sbjct: 235 RKAGIQLAIKKLNAIPTTCYPTPALRPLNSRLNTEKFQQCFDLTLPMWNIGVKRMI 290 >gi|148265298|ref|YP_001232004.1| dTDP-4-dehydrorhamnose reductase [Geobacter uraniireducens Rf4] gi|146398798|gb|ABQ27431.1| dTDP-4-dehydrorhamnose reductase [Geobacter uraniireducens Rf4] Length = 276 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 109/284 (38%), Positives = 153/284 (53%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G G + Q L M + E V DID+ + ++ P V+IN AAYT V Sbjct: 3 LVVGAKGMLGQDL--MTLLGTEARGVDIEDIDITSMESVQKVLVTLKPRVVINAAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E E+A +N EG +A + IG + ISTDYVFDG +P E P PL++ Sbjct: 61 DGCESNQELAMQVNGEGVAHLALISKEIGAKLVQISTDYVFDGGKGSPYLEDDPPRPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE A + +++I+RT W+Y + G NF+ +MLRLA E++E+SVV DQ G+PT Sbjct: 121 YGESKLAGEMN-ACFNPDHLIVRTQWLYGLHGKNFVETMLRLAAEKKELSVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + ++ AI + D G +H A+GG SW +FA IF E+ G V Sbjct: 180 WTVDLSLAIKALI-------DKGCCGTYH-AANGGFCSWNEFARVIFAEA----GMGITV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T + A RP YS LDC KL + W+E ++N L Sbjct: 228 NPMSTAELGRPAPRPLYSTLDCGKLNRDAGFQPQPWQEALKNYL 271 >gi|254238138|ref|ZP_04931461.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa C3719] gi|126170069|gb|EAZ55580.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa C3719] Length = 302 Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I R++WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRSSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVAS-GETSWHLYARFVIEQALERGWE 241 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T+ YP A RPA S LD KL + + W+ Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWR 286 >gi|126662750|ref|ZP_01733749.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BAL38] gi|126626129|gb|EAZ96818.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BAL38] Length = 315 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 121/317 (38%), Positives = 171/317 (53%), Gaps = 35/317 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMC------------VQDVEIIRVGRPDIDLLKPKDFASFFLS 48 M LV G NGQ+ Q++ S+ Q ++ + ++D+ ++ + F + Sbjct: 1 MVVLVTGANGQLGQAIQSISGKYPDSSQYSEQAQQIDFVFCSSSELDITNLENCQTVFST 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD--- 105 + P IN AAYTAVDKAE EP AF+INA GA +A + I+ISTD+VFD Sbjct: 61 YQPHFCINAAAYTAVDKAESEPANAFNINANGAENLAITSKKHNTILIHISTDFVFDAYF 120 Query: 106 --GLS------RTPID------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 G++ R P+ E P IYG +KL GE+ + + + I+RT+WVY Sbjct: 121 LDGIAYYDREFRLPLKSNLGLLETDVPFPSGIYGLTKLQGEQAIQATWEKHFIIRTSWVY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGI 210 S F +NFL +MLRLAKER ISVV DQ GTPT+A+ +A +I+I + E S GI Sbjct: 181 SQFRNNFLKTMLRLAKERDTISVVNDQIGTPTNAVDLAEVLIKIIESCHAELVSASNYGI 240 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 ++ + + G SW DFA+ IF + + I T YPT A RPA+S LD SK+ N Sbjct: 241 YNFSNE-GVCSWYDFAKEIF----NQNKISITLNPIPTTAYPTPAKRPAFSVLDKSKIKN 295 Query: 271 THNIRISTWKEGVRNIL 287 I I TW+E + + L Sbjct: 296 IFGIEIKTWEESLSSCL 312 >gi|295397280|ref|ZP_06807375.1| dTDP-4-dehydrorhamnose reductase [Aerococcus viridans ATCC 11563] gi|294974486|gb|EFG50218.1| dTDP-4-dehydrorhamnose reductase [Aerococcus viridans ATCC 11563] Length = 279 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 112/285 (39%), Positives = 152/285 (53%), Gaps = 13/285 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + +E + R +D+ D +SPDVI++ AA Sbjct: 1 MKVLVTGANGQLGYDVIKRLEEKKIEYLGTDRDTLDITNEDDVKRVIKDYSPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E+ ++N G I +A I IYISTDYVFDG P + N Sbjct: 61 YTAVDKAEDERELCHAVNVLGTRYIVEACKEIDAKMIYISTDYVFDGEGDKPFEVTDTPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++K GE +V + Y I+R +WV+ G+NF+ +MLRL KE EISVV DQ Sbjct: 121 PINYYGQTKYEGELEVQKLVDKYFIVRISWVFGSNGNNFVKTMLRLGKEIDEISVVADQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A L+E +T GI+H T + G SW +FA IF + G Sbjct: 181 GSPTYTYDLAGL-------LLEMIETDKYGIYHATNE-GYCSWYEFACEIF----NQAGM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV I T+ YPT+A RP S L L + + W E +R Sbjct: 229 DVKVNPIKTEDYPTRAKRPKNSRLAKEDLVRNNLKARNEWYEALR 273 >gi|313673141|ref|YP_004051252.1| dtdp-4-dehydrorhamnose reductase [Calditerrivibrio nitroreducens DSM 19672] gi|312939897|gb|ADR19089.1| dTDP-4-dehydrorhamnose reductase [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 167/299 (55%), Gaps = 23/299 (7%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 +IG G + LS + + +I + + F S I+N AAYTAVD Sbjct: 4 IIGARGMLGTELSEILKSNSVPFIATDKEISITDYESLGQFVRDRSIKFIVNCAAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS------RTPIDEFSPT 118 KAEDE ++ +INA+G IAK A IG I+ISTDYVF G S P E PT Sbjct: 64 KAEDEVDLCTTINADGVENIAKVAKQIGATVIHISTDYVFSGESIIENGKPRPYLEDDPT 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +IYGKSKL GE+++ S +I+RT+W+Y G+NF+ +M RL +E++EI+VV DQ Sbjct: 124 SPTSIYGKSKLEGEKRLLSIVPESIIIRTSWLYGEHGNNFVYTMFRLMREKKEIAVVSDQ 183 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G+PT +ARAI+Q+ NL +N + GI+H + + G +SW DFA I+ R G Sbjct: 184 YGSPTWTYDLARAILQMI-NLSKNKLSF--GIYHYSNE-GEISWYDFAVEIY-----RLG 234 Query: 239 PYSKVYR-------IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + I T+ YPTKA RP YS L K+ + + WK+ +R+ + I Sbjct: 235 REYEILKEDCNIKPIKTEDYPTKAMRPKYSVLSKEKIKRL-GVEVPFWKDSLRSFISGI 292 >gi|308071019|ref|YP_003872624.1| spore coat polysaccharide biosynthesis protein spsK [Paenibacillus polymyxa E681] gi|305860298|gb|ADM72086.1| Spore coat polysaccharide biosynthesis protein spsK [Paenibacillus polymyxa E681] Length = 290 Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 165/290 (56%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ + + + Q +++ R +D+ + + PD +I+ AA Sbjct: 1 MKVLVTGASGQLGKDVVKVFQEQGHDVLGYDREQLDITDLQQTVKIVGQYQPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G +A A + +G +YISTDYVFDG ++ P E+ TN Sbjct: 61 YTAVDAAETDVDGAYQVNAAGTRNMALATEKVGAKLVYISTDYVFDGTAKEPYHEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSK AGE + ++ Y I+RT+WVY ++G+NF+ +ML+L +E+ + VV DQ Sbjct: 121 PQSIYGKSKRAGEVLTQTLSSRYFIVRTSWVYGLYGNNFVKTMLKLGQEKPLLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RG 237 G+PT + +AR + ++ T GI+H ++GG +W +F + I ++AE Sbjct: 181 GSPTYTVDLARFLAELIQ-------TEKYGIYH-ASNGGSCTWYEFTQAILQDAAEILDA 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +K+ T+Q+P A RP S ++ + + W+EG+R+ L Sbjct: 233 KITAKLEPCSTEQFPRPAARPRNSVMEHIAIRTNGLNDLRDWREGLRDFL 282 >gi|228996411|ref|ZP_04156053.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock3-17] gi|228763374|gb|EEM12279.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock3-17] Length = 280 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 166/291 (57%), Gaps = 17/291 (5%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + ++ ++ + R R ++D+ S + +PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFVAYFAEKECTVYRFTRKELDITDATSVLSTIKNLNPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEEKWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMQTRDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V ++ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVKNFHSRYFIMRTSWLYGGEGPNFVRTMQMLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ +I+ T+ G +H++ + G SW +FA IF E Sbjct: 181 GCPT----YTKDLVCKTGEMIQ---TNQYGTYHVS-NQGECSWFEFATRIFQEMEAD--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNILV 288 KV + T++Y KA RP YS L C +L +R W+E +R ++ Sbjct: 230 -VKVIPVKTEEYGAKAERPRYSVLQHLCLELNGFAPMR--QWEEALREYVI 277 >gi|229008637|ref|ZP_04166049.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock1-4] gi|228752642|gb|EEM02258.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock1-4] Length = 280 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 17/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + R ++D+ S + +PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFVAYFTEKGDTLYSFTRNELDITDATSVFSTIKNLNPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE+ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEENWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMQMRDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V S+ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVKSFHSRYFIMRTSWLYGGEGPNFVRTMQTLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ +I+ T+ G +H++ + G SW +FA IF E G Sbjct: 181 GCPT----YTKDLVCKTGEMIQ---TNQYGTYHVS-NRGECSWFEFATRIFQEM----GA 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNILVNI 290 KV + T++Y KA RP YS L C +L +R W+E +R ++ I Sbjct: 229 DVKVIPVKTEEYGVKAERPRYSVLQHLCLELNGFAPMR--QWEEALREYIIEI 279 >gi|9957826|gb|AAG09507.1|AF279617_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVVETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KL GE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLTGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRMAFKKPEVA--GLYHLVA-GGTTTWYDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T Y T A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELKAVPTSAYQTLASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|253563372|ref|ZP_04840829.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947148|gb|EES87430.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 163/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++++ ++D+ + ++ D+I+N A Sbjct: 1 MNILVTGANGQLGNEMQVLARENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDIIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDNVELCDKLNNIAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEEEPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL +ER + V+ DQ Sbjct: 121 CPASVYGSTKLAGEQNVMDHCEKAMVIRTAWLYSIYGNNFVKTMIRLGQERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + + +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIFAAINKGV------VRGIYHFS-DEGVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T YP KA RP YS LD +K+ +T I I W+E ++ + Sbjct: 231 ASCKVKPLHTADYPAKAPRPHYSVLDKTKIKDTFGIEIPHWEESLKRCI 279 >gi|189424718|ref|YP_001951895.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ] gi|189420977|gb|ACD95375.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ] Length = 277 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 149/284 (52%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G NG + Q L + + + + PDID+ + P V+IN AAYT V Sbjct: 3 LVVGANGMLGQDLMGLLGERGRGVDL--PDIDITDMVSVQQVLTALKPKVVINCAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E E A +N EG +A IG + +STDYVFDG +P E PLNI Sbjct: 61 DGCESNTETAMQVNGEGVAFLALVTREIGAKLVQVSTDYVFDGSKGSPYREDDLQQPLNI 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE V +N +++RT W+Y + G NF+ +ML+L +E+ ++VV DQ G+PT Sbjct: 121 YGESKLAGELNVDINPDN-LLVRTQWLYGLHGKNFVETMLKLGQEKSVLTVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + +AR II + D RG +H A+ G SW FA+ IF E+ G +V Sbjct: 180 WTMDLARGIIALV-------DKDCRGTYH-CANSGHTSWNGFAKAIFDEA----GLPVQV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T+Q A RP YS LDCSKL W+E ++ L Sbjct: 228 LPMTTEQLNRPARRPLYSTLDCSKLVADTGFEPQAWREALKQYL 271 >gi|323960873|gb|EGB56493.1| RmlD substrate binding domain-containing protein [Escherichia coli H489] Length = 295 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 115/299 (38%), Positives = 160/299 (53%), Gaps = 16/299 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDF------ASFFLSFSPDVI 54 M L+ G NGQ+ L I V D DF A PDVI Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGHITAVDFDSTDYCG--DFSNSAGVAETVRLVKPDVI 58 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AA+TAVDKAE E E A +NA IAK A+++G ++ STDYVFDG P E Sbjct: 59 VNAAAHTAVDKAESEREFAELLNATSVAVIAKEAEALGAWLVHYSTDYVFDGSGERPWVE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +PLN+YG++KLAGE A+ + ++I RT+WVY+ G+NF +MLRL KERREISV Sbjct: 119 TDVISPLNVYGETKLAGEHG-AALCSRHLIFRTSWVYAARGANFAKTMLRLGKERREISV 177 Query: 175 VCDQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + DQFG PT A +A AH + + S + G++H+ A G +W D+A +F ++ Sbjct: 178 INDQFGAPTGAELLADC---TAHAIRVAQSKPDVAGLYHLAAS-GTTTWFDYARLVFDKA 233 Query: 234 AERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G +++ + T +PT A RP S LD K T ++ + W GV +L I Sbjct: 234 RDAGVELAVTQLNAVPTGAFPTPAKRPHNSRLDTKKFQRTFDLVLPDWSVGVERMLTEI 292 >gi|148360589|ref|YP_001251796.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila str. Corby] gi|296106345|ref|YP_003618045.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila 2300/99 Alcoy] gi|148282362|gb|ABQ56450.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila str. Corby] gi|295648246|gb|ADG24093.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila 2300/99 Alcoy] Length = 294 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 159/290 (54%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + E+ R +D K + L PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLLEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + IP I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCHLVNYCSLKNIPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ+ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PTSA IAR + +I I +S G++H A G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHY-AGQGVTNWHEFANVFLNMAKEKQLL 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ Sbjct: 239 LTLTDLNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVI 288 >gi|134297306|ref|YP_001121041.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134140463|gb|ABO56206.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 320 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 109/320 (34%), Positives = 162/320 (50%), Gaps = 38/320 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF---------------- 45 + L++G NGQ+ L +I + D D L P+ A Sbjct: 7 RILLLGKNGQVGWELQRSLAPLGPVIAL---DRDGLTPQQAAQLPAWQGQPLLDHPLCGD 63 Query: 46 ----------FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 + P +I+N AAYTAVD+AE E +A +NAE G +A+AA +G Sbjct: 64 LSDLEGLRRTVYALRPQIIVNAAAYTAVDRAESEVGLAHRLNAEAPGVLAQAAHEVGAWL 123 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 ++ STDYVF+G TP E T PLN YG +KL GE+++ ++I RT+WVY+ G Sbjct: 124 VHYSTDYVFNGSGHTPWQEGDATGPLNAYGLTKLEGEQRILQAGRQHLIFRTSWVYAARG 183 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 NF +MLRLA+ER ++V+ DQFG PT A IA ++ + +G +H+ A Sbjct: 184 GNFAKTMLRLARERERLTVIDDQFGAPTGAELIADVTAHALRQVLHTGEG--QGTYHLAA 241 Query: 216 DGGPVSWADFAEYIFWESAERGGPYS--KVYRI---FTKQYPTKAHRPAYSCLDCSKLAN 270 G +W +A+++ E A + P+ KV I T+ +PT A RP S L+ S L + Sbjct: 242 S-GETTWHRYAQFVI-EQARQLQPHGSWKVQAIDPVPTQTFPTPARRPHNSRLNTSLLKS 299 Query: 271 THNIRISTWKEGVRNILVNI 290 T + + TW+ GV +L I Sbjct: 300 TFGLHLPTWQRGVDRMLQEI 319 >gi|82701399|ref|YP_410965.1| dTDP-4-dehydrorhamnose reductase [Nitrosospira multiformis ATCC 25196] gi|82409464|gb|ABB73573.1| dTDP-4-dehydrorhamnose reductase [Nitrosospira multiformis ATCC 25196] Length = 300 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 163/298 (54%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRPDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G +GQ+ L EI+ + G + D + A + PDVI+N Sbjct: 1 MKILLFGKDGQVGWELQRSLAPLGEIVALDFGSQEYCGDFTRCDGIADTVRTVVPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EPE INA +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAYTAVDKAESEPERVRIINALAPAILAREAGKLGAWLVHYSTDYVFDGGGSAPRVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PLN+YG +KL GE+ + + N++I RT+WV++ GSNF +MLRLA++R ++V+ Sbjct: 121 PPAPLNMYGITKLEGEQAILTADCNHLIFRTSWVFAARGSNFAKTMLRLAQQRDSLNVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + I ++ G++H+ A G SW +A ++ + +R Sbjct: 181 DQVGAPTGAELLADITAHVIR--ISRQRQNISGLYHLAA-AGETSWYGYANFVLNFARQR 237 Query: 237 GGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V+ I + ++P+ A RP S LD +KL +T ++ + +W+ GV +L I Sbjct: 238 GVKLTAAPENVFPIASNEFPSAARRPKNSRLDTAKLQSTFDLSLPSWETGVARMLTEI 295 >gi|53712602|ref|YP_098594.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|60680814|ref|YP_210958.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis NCTC 9343] gi|265762742|ref|ZP_06091310.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|52215467|dbj|BAD48060.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|60492248|emb|CAH07013.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis NCTC 9343] gi|263255350|gb|EEZ26696.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|301162311|emb|CBW21856.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis 638R] Length = 287 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 163/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++++ ++D+ + ++ D+I+N A Sbjct: 1 MNILVTGANGQLGNEMQVLARENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDIIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDNVELCDKLNNIAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEEEPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL +ER + V+ DQ Sbjct: 121 CPASVYGSTKLAGEQNVMDHCEKAMVIRTAWLYSIYGNNFVKTMIRLGQERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + + +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIFAAINKGV------VRGIYHFS-DEGVCSWYDFTIAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T YP KA RP YS LD +K+ +T I I W+E ++ + Sbjct: 231 ASCKVKPLHTADYPAKAPRPHYSVLDKTKIKDTFGIEIPHWEESLKRCI 279 >gi|134300867|ref|YP_001114363.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum reducens MI-1] gi|134053567|gb|ABO51538.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum reducens MI-1] Length = 283 Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 163/288 (56%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + ++ + ++ +G +++++ + + + +PD II+ AA Sbjct: 1 MKILVTGYTGQLGYDVVQRGLKVGLSLVGLGSENLNIINGETVSHYVKELNPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED+ +++N EG +AKAA I +YISTDYVF+G +P E T Sbjct: 61 YTAVDKAEDDKSTCWNVNVEGTKNLAKAAKDIDAKFMYISTDYVFNGEGDSPFKETDETR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GEE V + I+R +WV+ I G+NF+ ++LRLA+ R+EI+VV DQ Sbjct: 121 PIGYYGVTKYQGEEIVKQLLERWFIVRVSWVFGINGNNFVKTILRLAETRKEINVVGDQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ +I + T GI+H + + G SWA+FA+ I+ ++ + Sbjct: 181 GSPTYTFDLAKLLIDMIQ-------TDKYGIYHASNE-GFCSWAEFAKEIYRQANKD--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T++YPT+A RP S + KL + + TW+ V L Sbjct: 230 -VKVNSISTEEYPTRAIRPKNSRMSKQKLRDNGFSLLPTWQNAVERYL 276 >gi|33594890|ref|NP_882533.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis 12822] gi|33564966|emb|CAE39913.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis] Length = 318 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 155/286 (54%), Gaps = 11/286 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + + R DL A+ +++P ++IN AAY Sbjct: 21 MNILLLGRTGQIGDALLAHPLAWARLAALERRQADLRDLGRLAAVLDAYAPRILINAAAY 80 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 81 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 140 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 141 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 200 Query: 181 TPTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A +IA Q AH D G++H++A GG VSW A +I + G Sbjct: 201 APTWAGRIAAVTWQAIDAHRRRRLPD----GLWHLSA-GGHVSWHGLACHIVARARRAGL 255 Query: 239 PYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S + + T QYP A RPA S LDC L + + W+ Sbjct: 256 ALSLDPAHIRPVTTAQYPLPAPRPANSRLDCGALRDALEPELPDWQ 301 >gi|298372398|ref|ZP_06982388.1| dTDP-4-dehydrorhamnose reductase [Bacteroidetes oral taxon 274 str. F0058] gi|298275302|gb|EFI16853.1| dTDP-4-dehydrorhamnose reductase [Bacteroidetes oral taxon 274 str. F0058] Length = 287 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 167/294 (56%), Gaps = 14/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD---FASFFLSFSPDVIINP 57 M L+ G+ GQ+ + ++ + D+D L D + FF + D+++N Sbjct: 1 MNILITGSYGQLGSEIRTLYTKKAGEHHFIFTDVDTLDICDETAVSDFFAAHKIDLVVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + + IN+ + AA G I+ISTDYVFDG + P E Sbjct: 61 AAYTAVDKAESDTDKCRQINSLSVRNLMSAAKRHGARIIHISTDYVFDGTAHKPYVETDR 120 Query: 118 TNPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P ++YG +K GE + +Y ++ +I+RT+W+YS FG+NF+ +MLRL KER+E+SVV Sbjct: 121 IAPQSVYGSTKAEGEAVLLDNYADDSIIVRTSWLYSTFGNNFVKTMLRLGKERKELSVVF 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT+A +A AI+ I SD G++H + + G SW DFA+ IF E Sbjct: 181 DQVGSPTNAADLAEAILSIV-----CSDRFESGVYHYSNE-GVCSWYDFAKAIF----EL 230 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + QYPT A RP YS L+ +K+ + + I+I W++ ++ ++ +I Sbjct: 231 AHIDCRVLPIESSQYPTPAKRPHYSVLNKAKIKSVYGIQIPYWRDSLQRVISSI 284 >gi|302671937|ref|YP_003831897.1| dTDP-4-dehydrorhamnose reductase RfbD1 [Butyrivibrio proteoclasticus B316] gi|302396410|gb|ADL35315.1| dTDP-4-dehydrorhamnose reductase RfbD1 [Butyrivibrio proteoclasticus B316] Length = 289 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 163/296 (55%), Gaps = 23/296 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDVII 55 K +V G NGQ+ ++++ EI+ G +D+ D P II Sbjct: 3 KIIVTGCNGQLGRAINKELNGKYEIVNTDVFEGAGITPLDITNVDDVIRLAREVKPSAII 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDK E + ++++ INA G +A A+ +G +++STDYVF+G P EF Sbjct: 63 NCAAYTAVDKQESDVDLSYKINAIGPRNLAIASTEVGAKLVHVSTDYVFEGNGTRPYVEF 122 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T P+++YGK+KLAGEE V +++ Y I+RTAW+Y G NF+ +ML L+++ EISVV Sbjct: 123 DKTGPVSVYGKTKLAGEEFVKQFSDKYFIVRTAWLYGD-GKNFVKTMLGLSEKMDEISVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ GTPTSA ++A+AI + T+ G+FH T +G +WADF + IF Sbjct: 182 MDQQGTPTSAKELAKAIAYLF-------PTNNYGVFHGTCEGS-TNWADFTDEIF----R 229 Query: 236 RGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +KV + T QY P A RPAYS L+ L T + + W + + L Sbjct: 230 IAGKSTKVNHVTTAQYLEKNPQAAPRPAYSILENYMLKLTSDYMFADWHDAIEEYL 285 >gi|120612802|ref|YP_972480.1| dTDP-4-dehydrorhamnose reductase [Acidovorax citrulli AAC00-1] gi|120591266|gb|ABM34706.1| dTDP-4-dehydrorhamnose reductase [Acidovorax citrulli AAC00-1] Length = 296 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 160/299 (53%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ +SLS + D +P D A + PDVI+N Sbjct: 1 MNVLLFGKGGQVGWELQRSLSVLGTVTALDFDSTSHCGDFSRPHDIAGTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP++A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDLARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGSRPWTEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KL GE+++ + ++ILRT+WVY G NF +MLRLA+ER ++V+ Sbjct: 121 VPAPLSVYGRTKLEGEQRIRASGARHLILRTSWVYGARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A A +L + + G++H+ A G W +A Y+ E A+R Sbjct: 181 DQWGAPTGADLLADATAHAIRHLQQRPADA--GLYHLVA-AGETHWHAYACYVL-EQAQR 236 Query: 237 GGPYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P K V + T +PT A RP S LD + +T + + W+ G+ +L I Sbjct: 237 IQPALKIAARDVAAVPTSAFPTPAVRPHNSRLDTRRFQSTFGLALPHWQAGIARMLAEI 295 >gi|294635548|ref|ZP_06714028.1| dTDP-4-dehydrorhamnose reductase [Edwardsiella tarda ATCC 23685] gi|291091117|gb|EFE23678.1| dTDP-4-dehydrorhamnose reductase [Edwardsiella tarda ATCC 23685] Length = 296 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 115/294 (39%), Positives = 162/294 (55%), Gaps = 12/294 (4%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L S + V I D D P A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRSLAPLGKVTAIDFDSTDYCGDFSNPNGVAETVRRLKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+ +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVVAIAKEAELLGAWLVHYSTDYVFDGSGEKSWVEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE A + ++I RT+WVY+ G+NF +MLRL +E +EISV+ Sbjct: 121 LTAPLNVYGETKLAGELG-AKLCSRHLIFRTSWVYAARGTNFAKTMLRLGQEHQEISVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG PT A +A AH + I S ++ G++H+ A G +W D+A+ +F ++ + Sbjct: 180 DQFGAPTGAELLADC---TAHAIRIAQSKPTVSGLYHLIAS-GTTTWFDYAQLVFAKARK 235 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + +V + + +PT A RP S LD +K T N+ + W+ GV +L Sbjct: 236 AGIDLTVRQVRAVPSSAFPTPAKRPHNSRLDTTKFQQTFNLVLPDWQIGVERML 289 >gi|238021192|ref|ZP_04601618.1| hypothetical protein GCWU000324_01090 [Kingella oralis ATCC 51147] gi|237868172|gb|EEP69178.1| hypothetical protein GCWU000324_01090 [Kingella oralis ATCC 51147] Length = 293 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 116/291 (39%), Positives = 161/291 (55%), Gaps = 14/291 (4%) Query: 4 LVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFL---SFSPDVIINPA 58 L+ G NGQ+ L D +I R +D+ D A+ F + P +IIN A Sbjct: 5 LITGANGQVGSQLVRQLQARPDATVIAADRDTLDI---TDRAAVFQAAQTHRPHIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE EPE+A +IN +G +A+AA +I ++ISTDYVFDG P E T Sbjct: 62 AHTAVDKAESEPELARAINVDGTRHLAEAAQAISAAFLHISTDYVFDGKGEAPYRETDST 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG++KL GE + ++LRTAWV+ G+NF+ +MLRL +ER + +V DQ Sbjct: 122 APQSVYGQTKLDGETAALAACPRTIVLRTAWVFGEHGNNFVKTMLRLGRERDTLGIVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT A IA A+IQIA ++ G++H + G P SW FA IF +AE+ Sbjct: 182 FGAPTYAGDIAAALIQIARHIAAGQPVEY-GVYHFS--GSPYTSWHGFAGEIFRRAAEQN 238 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T YPT A RPA S LDCSK+ I S W+ + ++ Sbjct: 239 LLPRIPTLNAIATADYPTPARRPANSRLDCSKIQAAFGIAPSDWQAALGSL 289 >gi|222087848|ref|YP_002546386.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium radiobacter K84] gi|221725296|gb|ACM28452.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium radiobacter K84] Length = 295 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 116/289 (40%), Positives = 164/289 (56%), Gaps = 4/289 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G NGQ+A +L+ + + +E + GR ++DL + I+N AA Sbjct: 1 MTLLILGKNGQVATALAELAEERGLEWVAWGRGELDLSDLDQTYVAIMKSGASAIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A +NA+ +A+AA + +P ++ISTDYVF G TP E + Sbjct: 61 YTAVDKAESEAASAMRLNADAPAIVAQAARELDVPFVHISTDYVFSGDKTTPYTEDDAIS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++IYG SK GE++V + ILRTAWV+ GSNF+ +MLRL ER+E+ VV DQ Sbjct: 121 PISIYGLSKAEGEKRVREVYSAATILRTAWVFHESGSNFVKTMLRLGGERKELRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A ++I + + S+ G FH A G +W FAE IF E+A G Sbjct: 181 GNPTYAGDIALACLKIV-EIAKARSRSVAGTFHF-AGRGYTTWHGFAEAIFAEAAAHGWV 238 Query: 240 Y-SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RPA S DCS++A+ I W++ + + L Sbjct: 239 VPGRVTAISTAEYPTPARRPANSRFDCSRIASVLEIDAPHWRDSLAHCL 287 >gi|146298096|ref|YP_001192687.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101] gi|146152514|gb|ABQ03368.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101] Length = 281 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 114/294 (38%), Positives = 161/294 (54%), Gaps = 22/294 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI-------IRVGRPDIDLLKPKDFASFFLSFSPDVI 54 K LV G NGQI L + E I++ +++LLK + P+VI Sbjct: 3 KILVTGANGQIGSELFVLSTSYPEFEWIFADRIKITLDNLELLKIQ-----LNEIKPNVI 57 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 N AYT VDKAE E E+AF IN IAK + I++STDYVFDG S + ++E Sbjct: 58 FNCGAYTDVDKAETEKELAFIINYLAVELIAKYTYENNVKLIHVSTDYVFDGSSSSALNE 117 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + TNP+N+YG+SKL GE N +I+RT+WVYS FG NF+ +M RL ER EI+V Sbjct: 118 EAETNPINVYGESKLKGELACLKENPNSIIIRTSWVYSKFGKNFVKTMQRLMLERDEINV 177 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G+PT A +A+ +I I G+++ + + G +SW +FA I Sbjct: 178 VNDQIGSPTYAADLAQVLINIVRFC-----GWFPGVYNYSNE-GEISWYEFALSI----K 227 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E GG KV I + Y T A RP +S LD K+ T+N+ I +K+ ++N+ + Sbjct: 228 EFGGYSCKVEGIASSLYHTPAKRPRFSLLDKKKIKETYNLEIPCYKKSLKNMFI 281 >gi|258543637|ref|YP_003189070.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01] gi|256634715|dbj|BAI00691.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01] gi|256637771|dbj|BAI03740.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-03] gi|256640825|dbj|BAI06787.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-07] gi|256643880|dbj|BAI09835.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-22] gi|256646935|dbj|BAI12883.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-26] gi|256649988|dbj|BAI15929.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-32] gi|256652978|dbj|BAI18912.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656032|dbj|BAI21959.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-12] Length = 301 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 4/288 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A SL ++ + VGRP+ D +P+ + + P ++N AA+TAV Sbjct: 12 LVTGGKGQLATSLVNLGGPRIRC--VGRPNFDFDRPETLKTTLDAIKPVAVVNAAAWTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EPE A N G +A+ GIP I++STDYVF G P E P +P + Sbjct: 70 DLAESEPEAAARANTTGPELLARLCAERGIPFIHVSTDYVFAGDKGAPYLETDPVSPQTV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K GE+++ + +ILRT+WVYS G NF+ +ML + + VV DQ G PT Sbjct: 130 YGSTKAEGEQRILAADPRSIILRTSWVYSAHGKNFVRTMLNAGAKNPALKVVGDQRGNPT 189 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 + +ARAI+ I + + GI+H G +W AE +++E G Sbjct: 190 CSDDLARAILSILATIEKTGWKDEYAGIYHACGT-GETTWHGLAEAALQKASEYGQAKPT 248 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ +PT A RPA S +D SKLA +++ W+E V ++ +I Sbjct: 249 ITAIRTEDWPTPAKRPADSRMDNSKLARVFGVQMPQWQESVNKVVHHI 296 >gi|325981476|ref|YP_004293878.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas sp. AL212] gi|325530995|gb|ADZ25716.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas sp. AL212] Length = 303 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 164/299 (54%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M+ L++G NGQ+ L E+I + DL K +P++I+N Sbjct: 1 MRILLLGKNGQLGWELQRSLAPLGELISLDSASRELCGDLSNFKGIKQTIQKTAPNIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE+EPE+ +NAE +A+ A ++ STDYVF+G S P E Sbjct: 61 AAAYTAVDKAENEPELTQILNAEAPKILAQGAKEQNARLVHYSTDYVFNGNSSQPYVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN YGK+KL G+E + + +++I RT+W+Y+ G NF+ ++L LA+ R +++VV Sbjct: 121 TADPLNYYGKTKLEGDENIMTSGCSHLIFRTSWIYATLGRNFIKTILYLAQNRDKLTVVN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PTSA IA A+ L + G+F++TA G SW +FA++I + Sbjct: 181 DQIGSPTSAELIADI---TAYTLFTVKYKPKISGLFNLTAKGY-TSWYEFAKFILEHVEK 236 Query: 236 RGGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R P + + I + ++P A RP SCL+ +KL NT + + W+ GV IL I Sbjct: 237 RNLPLKIHSTHIDPISSVEFPLPAKRPLNSCLNTNKLENTFQLSLPAWQVGVSRILTEI 295 >gi|255008051|ref|ZP_05280177.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313145768|ref|ZP_07807961.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134535|gb|EFR51895.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 287 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 160/289 (55%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++++ ++D+ + ++ DVI+N A Sbjct: 1 MNILVTGANGQLGNEMQVLAKENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDDAEFCDKLNNVAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEDQPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE+ V ++ +++RTAW+YSI+G+NF+ +M+RL +ER V+ DQ Sbjct: 121 CPTSVYGSTKLTGEQNVMNHCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESFGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLALAIFAALNKGI------VRGIYHFS-DEGVCSWYDFTIAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T YP KA RP YS LD +K+ T I I W+E ++ + Sbjct: 231 TSCKVKPLHTADYPAKAPRPHYSVLDKTKIKETFGIEIPHWEESLKRCI 279 >gi|167753451|ref|ZP_02425578.1| hypothetical protein ALIPUT_01725 [Alistipes putredinis DSM 17216] gi|167658076|gb|EDS02206.1| hypothetical protein ALIPUT_01725 [Alistipes putredinis DSM 17216] Length = 286 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 155/288 (53%), Gaps = 8/288 (2%) Query: 4 LVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G +GQ+ + + ++ D+D+ F + D I+N AAYT Sbjct: 5 LVTGADGQLGREMRTLGAASRHRYFFTDVADLDITDANAVRRFVENERIDAIVNCAAYTN 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E E A IN E +A+AA + G +ISTDYVF G+ P E PT PL Sbjct: 65 VDKAEEEAETADRINHEAVRNLAEAAKACGATLFHISTDYVFGGMGNIPFREEDPTAPLG 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK+KLAGEE + + +++ RTAW+YS +G NFL +ML+L ++ E+ VV DQ GTP Sbjct: 125 VYGKTKLAGEEAIVASGCKHLVFRTAWLYSPYGRNFLKTMLQLTADKPELQVVFDQVGTP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A I + IE+ D + R F+ ++ G SW DFA I +A G K Sbjct: 185 TCVADLACVIF----DRIESGDYAGREGFYHFSNEGVCSWFDFAHEI---AALAGHTSCK 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP YS LD +K+ T I I W++ + + + Sbjct: 238 IRPCHSAEFPSKVQRPNYSVLDKTKIKTTFGIDIPHWRDSLVRCMATL 285 >gi|332297028|ref|YP_004438950.1| dTDP-4-dehydrorhamnose reductase [Treponema brennaborense DSM 12168] gi|332180131|gb|AEE15819.1| dTDP-4-dehydrorhamnose reductase [Treponema brennaborense DSM 12168] Length = 310 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 22/296 (7%) Query: 5 VIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPAAYTA 62 +IG NG + ++ + D+E + R +ID+ SF + D IIN AAYTA Sbjct: 4 LIGKNGMLGSEIARQLERADLEYVGTDR-EIDITDQAALDSFANGNHGIDWIINCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 V+KAE+EPE+A +NAEGAG IA+ A G I+ISTDYVFDG +TP E P +PL Sbjct: 63 VEKAEEEPELAARLNAEGAGNIARTAKKAGARMIHISTDYVFDGAGKTPYTEIMPISPLG 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK+K GE+ V ++ + RTAW+Y G NF+ +M+ L R I+VV DQFG+P Sbjct: 123 VYGKTKADGEKLVTETLDDAYVFRTAWLYGPRGKNFVYTMVDLMNGRDSITVVADQFGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-------------GIFHMTADGGPVSWADFAEYI 229 T + +AR II + ++ + + + GI+H T + G +W DFA I Sbjct: 183 TCTMDLARCIITV---ILRDRQSGVSAAAGRQTISAVPPGIYHCTGE-GETTWYDFACEI 238 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + +G V T +Y K RPAYS L SKL I++ +W+E + Sbjct: 239 YRIGKLKGIVTRNCTVKPCTTAEYGAKVARPAYSVLSKSKLKKALGIKLPSWQESL 294 >gi|317492490|ref|ZP_07950918.1| RmlD substrate binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919482|gb|EFV40813.1| RmlD substrate binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 299 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 112/294 (38%), Positives = 150/294 (51%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L II V D P+ A+ PDVI+N Sbjct: 1 MNILLFGKNGQVGWELQRSLAPLGNIIAVDHDSSEYCGDFSHPEGVAATVRKIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+ +G I+ STDYV G E Sbjct: 61 AAAHTAVDKAESEQEFAQLLNATSVEAIAKEAEILGAWLIHYSTDYVLPGTGNRAWIETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN+YG +KLAGE + + ++I RT+WVY+ G+NF +MLRL ER E+S++ Sbjct: 121 EPSPLNVYGVTKLAGERAIQNQCKKHLIFRTSWVYASKGNNFAKTMLRLGAEREELSIIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A I N D + GI+H+ A G +W +FA +F E A R Sbjct: 181 DQYGAPTGAELLADCTAHAIKKAISNHDVA--GIYHLVAS-GTTTWFEFANLVFAE-ARR 236 Query: 237 GGPYSKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G KV T Y T A RP S LD +K ++ + W GV+ +L Sbjct: 237 AGIELKVNNTLPVPTSSYQTPAKRPLNSRLDTTKFKQVFDLNLPNWDVGVKRML 290 >gi|188588264|ref|YP_001922377.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] gi|188498545|gb|ACD51681.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] Length = 284 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 13/286 (4%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ + + +++E I R ++D+ + + + P +I+ AAYTA Sbjct: 3 LVTGANGQLGYDVIKELKKRNIECIGTTRKELDITNYNEVSKYIEELKPKCVIHCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKA+DE EI +N G IAK I IYIS+DYVFDG P + NPL+ Sbjct: 63 VDKAQDEEEICTKVNVYGTENIAKVCRRINAKMIYISSDYVFDGAGDKPHEIEETPNPLS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK GE KV SY Y I+RT+WV+ + GSNF+ +ML+L KE+ ++VVCDQ G+P Sbjct: 123 VYGSSKYNGELKVKSYLKKYFIVRTSWVFGLNGSNFVKTMLKLGKEKESLNVVCDQIGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A+ + +A + GI+H T + G SWA+FAE I K Sbjct: 183 TYTEDLAKLLCDMAV-------SEKYGIYHAT-NQGFCSWAEFAEEIM----RIANLNCK 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + I T +Y TKA RP S L L ++ + +WK ++ +V Sbjct: 231 INYISTNEYKTKAIRPLNSRLSKKSLLDSGFNYLPSWKNALKVYIV 276 >gi|18309600|ref|NP_561534.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens str. 13] gi|110800859|ref|YP_695052.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|110801012|ref|YP_694936.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|18144277|dbj|BAB80324.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens str. 13] gi|110675506|gb|ABG84493.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|110675659|gb|ABG84646.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] Length = 294 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ +++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM----ELAGNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|87123106|ref|ZP_01078957.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] gi|86168826|gb|EAQ70082.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] Length = 305 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 111/302 (36%), Positives = 161/302 (53%), Gaps = 16/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVI 54 ++ L+ G GQ+ Q+L + + +E+I GR +DL + + PD + Sbjct: 5 IRVLLTGAAGQLGQALMASVPEGIELIATGRSVGQGMLGLDLADAEACRQAVEAHQPDWV 64 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVD+AE EPE+A ++NA+ A A+A +G + +STD+VF+G +P Sbjct: 65 LNAGAYTAVDRAEMEPELAQAVNAQAPCAFAEALADMGGHLLQVSTDFVFNGQQGSPYRP 124 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 P NPL +YG++K AGEE V + +ILRT+WV G NF L+MLRL +ER E Sbjct: 125 EQPRNPLGMYGRTKAAGEEAVEQLLGGSGRGLILRTSWVMGPVGRNFALTMLRLHRERPE 184 Query: 172 ISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 I+VV DQ G PTS +A A + IA + S L + H + D G SW D A + Sbjct: 185 IAVVADQVGCPTSTATLAAACWRAIA---VAESPNGLPPVLHWS-DAGAASWYDVAVAVG 240 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G + V I T +YPT A RP+YS LDCS ++ W++ + +L Sbjct: 241 ELGVELGLLERAAHVNPITTAEYPTPAQRPSYSLLDCSATRQVLDLPALHWRQALHQLLQ 300 Query: 289 NI 290 I Sbjct: 301 AI 302 >gi|222445607|ref|ZP_03608122.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii DSM 2375] gi|222435172|gb|EEE42337.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii DSM 2375] Length = 280 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 157/288 (54%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLIDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ E AFS+N EG +A P ++ISTDYVF+G + TP E P Sbjct: 61 TDVDGCEENRERAFSVNGEGVRNLAIGCREADCPLVHISTDYVFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GE+ + + + I+RTAW+Y + G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEQAIQEILDKFFIVRTAWLYGVNGGNFPKTMLELAKTHDELTVVYDEIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A AI + LIE T GI+H+T + G SW +FA+YIF E G Sbjct: 181 TPTYTPDLAEAIGK----LIE---TDYYGIYHIT-NSGNCSWCEFAKYIF----EIAGVD 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + ++ A RP+YS L+ K + + ++KE +++ L+ Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKKWVDNGFEPLRSYKEAIKDYLI 276 >gi|145219285|ref|YP_001129994.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris vibrioformis DSM 265] gi|145205449|gb|ABP36492.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeovibrioides DSM 265] Length = 286 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 108/295 (36%), Positives = 167/295 (56%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR------PDIDLLKPKDFASFFLSFSPDVI 54 M LV G+NGQ+ + L + ++ R ++D+ + S P V+ Sbjct: 1 MNILVTGSNGQLGRELQELS----RLLPAHRFFFHDLQELDITESSAVMSAVARCQPSVL 56 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVD+AE +PE AF +N GAG +A A G+ +++STDYVF+G TP E Sbjct: 57 INAAAYTAVDRAERDPESAFRVNRNGAGVLASACREAGVLLLHVSTDYVFEGNRPTPYSE 116 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P ++YG+SKL GE+ + +++I+RT+W+YS +G+NF+ +MLRL E+ E+ V Sbjct: 117 SDSPSPSSVYGRSKLQGEQLIGEIDPSHIIVRTSWLYSPYGANFVKTMLRLGAEKSELQV 176 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPTSA +A A+++IA + + R +H + + G SW DFA + Sbjct: 177 VFDQTGTPTSAADLAGALLEIAGH--HDPSRHYRQTYHYSNE-GTASWYDFACAVM---- 229 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++ + + YP +A RP+YS LD S + IRI W++ + +L N Sbjct: 230 ELSGLECRILPVDSSCYPQEAPRPSYSVLDKSAIKRDWGIRIPYWRDSLAAMLSN 284 >gi|299137001|ref|ZP_07030184.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX8] gi|298601516|gb|EFI57671.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX8] Length = 310 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 13/298 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+IG NGQ+ L M ++ V R ++DL + P I+N AAYTAV Sbjct: 7 LLIGANGQVGSELLPMLNALGHVVAVTRAELDLTDAAAIRAMVRQVKPRWIVNAAAYTAV 66 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + AF+IN + G + + A IG ++ STDYVF G P E P NPL + Sbjct: 67 DKAESDIPTAFAINGDAPGVLGEEAARIGAAVLHFSTDYVFAGDGTRPWREDDPVNPLGV 126 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGE +A+ ++ RT+WV+ G NFLL++L+ A+ER E+ +V DQ+G PT Sbjct: 127 YGASKLAGERALAASGAAHLTFRTSWVFGARGKNFLLTILKFAREREELRIVDDQYGAPT 186 Query: 184 SALQIAR----AIIQIAHNLIENSDT------SLRGIFHMTADGGPVSWADFA-EYI-FW 231 + +AR AI++ + T L GI+H + G +W FA E++ Sbjct: 187 WSRTLARLATHAILRGEKDAATQGGTLVEAMQPLSGIYHACS-AGCTTWFGFASEFVGLA 245 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + A ++++ + + YPT A RP S ++C KLA+T + TW++ ++ Sbjct: 246 QLAHPEQAFARLAPVSSDAYPTPAKRPQNSRMNCEKLAHTLEFELPTWQDSTAEVMAE 303 >gi|298209184|ref|YP_003717363.1| putative dTDP-4-dehydrorhamnose reductase [Croceibacter atlanticus HTCC2559] gi|83849111|gb|EAP86980.1| putative dTDP-4-dehydrorhamnose reductase [Croceibacter atlanticus HTCC2559] Length = 288 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 161/286 (56%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + ++ ++ +D+ + + D IIN AAYT Sbjct: 10 LVTGANGQLGTCIKAIANNYPSCNVVFEDSSSLDITNRNQVVQYMSNSQFDYIINCAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AED E AF INA+ + A +++STD+VFDG P E T+PL Sbjct: 70 AVDLAEDNKEKAFEINAKAVENLTIACKRFSSTLLHVSTDFVFDGKKNAPYLERDSTHPL 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG SKL GE+ + + YVI+RT+W++S FG+NF+ +M+RL +E++E+S+V DQ+G+ Sbjct: 130 NYYGASKLNGEQIIQQALSKYVIIRTSWLFSEFGNNFVKTMVRLGQEKKELSIVADQYGS 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A+ +A ++ I +S TS G++H + + G +W +FA IF + Sbjct: 190 PTYAIDLAHILL----TFIASSSTSY-GLYHFS-NHGATTWYNFAAEIF----KLQNQDI 239 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++++ +KQ+ ++A RP YS L+ K+ T N+ I W+ ++ ++ Sbjct: 240 RLHKTTSKQFASRAIRPKYSVLETKKVKETLNVEIRNWQSALKEMI 285 >gi|83645210|ref|YP_433645.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396] gi|83633253|gb|ABC29220.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396] Length = 303 Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/300 (36%), Positives = 160/300 (53%), Gaps = 13/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +V G GQ+ L+ + +GR DL P + PDVI+N AAY Sbjct: 1 MEIMVTGATGQLGWELARSLSMLGRVRALGRNQCDLNDPGSLRAVVRDIKPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A +N++ +A+ A + G ++ STDYVF+G P E P P Sbjct: 61 TAVDKAESDRGGAMRVNSDSVAVLAEEAKNCGALFVHYSTDYVFNGEKGAPYVEVDPVCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL+GE + NY+I RT+WVY+ G NFLL+ML LA+ + +SVV DQ G Sbjct: 121 INTYGYSKLSGENLIRQVDGNYLIFRTSWVYASRGKNFLLTMLNLAQTKEVLSVVSDQRG 180 Query: 181 TPTSALQIAR----AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE-SAE 235 PT A +A+ ++ + H + NS S GI+++ A G SW FA Y+ E ++ Sbjct: 181 APTWARDLAQMTLLSVYKSIHAIHNNSFKS--GIYNL-ASSGETSWHGFASYLIEEFKSQ 237 Query: 236 RGGPYSKVY-----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 GG +V ++ + Y T A RPAYS LD +K + + + WK+ R + +I Sbjct: 238 SGGGAGQVLVKDINKVTSDFYKTDATRPAYSKLDATKFEDEFQVFMPDWKDSCRLCIADI 297 >gi|326318819|ref|YP_004236491.1| dTDP-4-dehydrorhamnose reductase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375655|gb|ADX47924.1| dTDP-4-dehydrorhamnose reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ +SLS + D +P D A + PDVI+N Sbjct: 1 MNILLFGKGGQVGWELQRSLSVLGTVTALDFDSTSHCGDFSRPHDIAGTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP++A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDLARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGARPWTEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KL GE+++ + ++ILRT+WVY G NF +MLRLA+ER ++V+ Sbjct: 121 VPAPLSVYGRTKLEGEQRIQASGARHLILRTSWVYGARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A A +L + + G++H+ A G W +A Y+ E A+R Sbjct: 181 DQWGAPTGADLLADATAHAIRHLQQRPADA--GLYHLVA-AGETHWHAYACYVL-EQAQR 236 Query: 237 GGPYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P K V + T +PT A RP S LD + T + + W+ G+ +L I Sbjct: 237 IQPALKIAARDVVAVPTSAFPTPAVRPHNSRLDTRRFQATFGLALPHWQAGIARMLTEI 295 >gi|218258015|ref|ZP_03474457.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii DSM 18315] gi|218225814|gb|EEC98464.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii DSM 18315] Length = 288 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 159/290 (54%), Gaps = 11/290 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + + +D+ + +F D IIN AAYT Sbjct: 5 LVTGANGQLGNSIRQLAAGYPQYAFVFTDVDTLDICDAQAVDAFVKEKQADYIINCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ + F IN + + +AA G I++STDYVFDG + P E T P Sbjct: 65 AVDKAEDDEALCFRINRDAVRNLGEAARMAGARVIHVSTDYVFDGTNHLPYVETDATCPA 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ + + VI+RTAW+YS FG+NF+ +MLRL ER ++SVV DQ G+ Sbjct: 125 SVYGRTKLAGEQALQEVCPDAVIIRTAWLYSEFGNNFVKTMLRLGNEREQLSVVFDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A I+ + L++ + + GI+H + + G SW DFA I E G Sbjct: 185 PTYAGDLAATILAV---LVQAEAGAFVPGIYHYSNE-GVCSWYDFAVKIM----ELGDAP 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I +K YP KA RP +S L+ +K+ + I I W+ +R + I Sbjct: 237 CHVLPIESKDYPAKAARPHFSVLNKTKIKTIYTISIPHWEASLRECMKRI 286 >gi|225350727|ref|YP_002720716.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae WA1] gi|225216411|gb|ACN85144.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae WA1] gi|330368658|gb|AEC11780.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] gi|330368668|gb|AEC11788.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] gi|330368673|gb|AEC11792.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] Length = 286 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 106/271 (39%), Positives = 154/271 (56%), Gaps = 19/271 (7%) Query: 5 VIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 VIG NG +AQ L + ++E +ID+ +F + IIN +AYT V Sbjct: 4 VIGKNGMLAQDILKAFNKNNIEYTSTA-SNIDITNIDILNNFIKDKNIKTIINCSAYTKV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AEDE +I + +N EG I + A +I I+ STDYVFDG + P +E TNP+NI Sbjct: 63 DLAEDEKDICYKVNGEGVKNITEIASNINADLIHFSTDYVFDGENNKPYNEEDKTNPINI 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKL G EK A + N +++R +W+Y I+G NF+ +M+ L + I VV DQFG+PT Sbjct: 123 YGKSKLEG-EKYALFYNKAIVIRVSWLYGIYGKNFVYTMINLMNSKESIKVVNDQFGSPT 181 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS-- 241 +A I +++I+N++ G++H T +G +SW DFA+ I+ +G Y+ Sbjct: 182 YTEDVAMVI----YDIIKNNNFDY-GLYHYTNEGN-ISWYDFAKTIY----NKGKEYNII 231 Query: 242 ----KVYRIFTKQYPTKAHRPAYSCLDCSKL 268 KV T++YPTKA RP YS L K+ Sbjct: 232 NNDCKVNPCTTEEYPTKAKRPKYSVLSVEKI 262 >gi|313668764|ref|YP_004049048.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ST-640] gi|313006226|emb|CBN87688.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria lactamica 020-06] Length = 287 Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLASAAYRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII+ L++ S + +RGI+H A G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIR----LLQQS-SPVRGIYHF-AGGKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|297538356|ref|YP_003674125.1| dTDP-4-dehydrorhamnose reductase [Methylotenera sp. 301] gi|297257703|gb|ADI29548.1| dTDP-4-dehydrorhamnose reductase [Methylotenera sp. 301] Length = 301 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 +K L++G NGQ+ L E+I + + D A + +PDVI+N Sbjct: 4 IKILLLGKNGQVGWELQRSLAPLGEVIALDAKSLAYCGDFTNLDGLAQAIRTIAPDVIVN 63 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +INA +A A IG ++ STDYVFDG P E Sbjct: 64 AAAHTAVDKAESEPELARTINALAPAVLANEAKRIGAWLVHYSTDYVFDGSGEMPRLETD 123 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PL+IYG +KL GE + + ++I RT+WVY+ G NF +ML+LA+ER + V+ Sbjct: 124 EVSPLSIYGHTKLEGENAIVASGCKHLIFRTSWVYAARGGNFAKTMLKLAQERDSLKVIN 183 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + + + S G++H+ A G SW +A ++ E A + Sbjct: 184 DQIGAPTGADLLADVTAHGIRKALVSPEVS--GLYHLVAS-GETSWHGYASFVI-EHARQ 239 Query: 237 GGPYSKV-----YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV + T +PT A RP S L+ +KL N+ ++ + +W+ GV +L I Sbjct: 240 AGVEIKVAADAIQAVPTSSFPTPAKRPLNSRLNTNKLQNSFDLVLPSWQSGVTRLLAEI 298 >gi|33599165|ref|NP_886725.1| dTDP-4-dehydrorhamnose reductase [Bordetella bronchiseptica RB50] gi|33575211|emb|CAE30674.1| dTDP-4-dehydrorhamnose reductase [Bordetella bronchiseptica RB50] Length = 298 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 154/286 (53%), Gaps = 11/286 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + R DL A+ +++P ++IN AAY Sbjct: 1 MNILLLGRTGQIGDALLAHPPAWARLAALERRQADLRDLGRLAAVLDAYAPRILINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 61 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 121 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 180 Query: 181 TPTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A +IA Q AH D G++H++A GG VSW A +I + G Sbjct: 181 APTWAGRIATVTWQAIDAHRRRRLPD----GLWHLSA-GGHVSWHGLACHIVARARRAGL 235 Query: 239 PYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S + + T QYP A RPA S LDC L + + W+ Sbjct: 236 ALSLDPAHIRPVTTAQYPLPAPRPANSRLDCGALRDALEPELPDWQ 281 >gi|152979832|ref|YP_001353940.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] gi|151279909|gb|ABR88319.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] Length = 298 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 112/299 (37%), Positives = 153/299 (51%), Gaps = 22/299 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L +++ + R +DL S P +I+NPAAY Sbjct: 1 MKILLTGRNGQVGYELERTLQGLGQVVALDRAQMDLSDLDQVRSVIREVKPQLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A INA+ IA+ A +G I+ STDYVFDG E NP Sbjct: 61 TAVDLAEREVELAMRINAQAPEVIAQEAKKLGAGMIHYSTDYVFDGDQTGSYTEDDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ V + ++ILRT+WVY G NFLL++ RLA+ER E+ +V DQFG Sbjct: 121 QSVYGRSKLAGEQAVQAAGIPHLILRTSWVYGARGKNFLLTVRRLAQERDELRIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIE-------NSDTSLR--------GIFHMTADGGPVSWADF 225 PT IA A AH LI+ D L G++H++A G SW Sbjct: 181 APTWCRTIAEA---TAHALIQMQRYSGTQKDAGLDQDVWLNRGGLYHLSAQ-GRTSWHGL 236 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + I + P ++ I T+ YP A RPA S L C + T + W E ++ Sbjct: 237 TQAILAHPSISKKP--RLTPISTQDYPLPARRPANSSLSCERFMQTF-CGLPEWDEALK 292 >gi|153813195|ref|ZP_01965863.1| hypothetical protein RUMOBE_03611 [Ruminococcus obeum ATCC 29174] gi|149830726|gb|EDM85817.1| hypothetical protein RUMOBE_03611 [Ruminococcus obeum ATCC 29174] Length = 285 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ ++ + + E + V ++D+ PD +++ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGYEGVGVDVDEMDITDRAAVERVIGEVHPDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT- 118 +TAVD AED E+ +NAEG IA+ + IP +YISTDYVFDG P + P Sbjct: 61 WTAVDAAEDNQEVCHKVNAEGTENIARICGKLDIPMVYISTDYVFDGQGTRPWEPDDPVV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG++K GE V Y + I+R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 KPLNVYGQAKYDGEVAVEKYAPKHYIVRIAWVFGLNGKNFIKTMLNLGKTHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ +++E + G +H T +GG +SW DFA+ IF + G Sbjct: 181 IGTPTYTYDLARLLV----DMLEKEEY---GKYHATNEGGYISWCDFAKEIF----RQAG 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP S L+ KL R+ WK+ + L I Sbjct: 230 MDVKVLPVSSAEYPAKAKRPTNSRLEKKKLEEHGFTRLPDWKDALGRYLKEI 281 >gi|294673013|ref|YP_003573629.1| dTDP-4-dehydrorhamnose reductase [Prevotella ruminicola 23] gi|294472332|gb|ADE81721.1| dTDP-4-dehydrorhamnose reductase [Prevotella ruminicola 23] Length = 285 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/285 (37%), Positives = 158/285 (55%), Gaps = 12/285 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ + + ++ + ++D+ + F D I+N A Sbjct: 1 MRILITGCNGQLGNEMQLLEKENQQHTYFNTDVAELDITDEEAINRFVTDNEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+ E+ +NA G +AKA + G I ISTDYVFDG + P E Sbjct: 61 AYTAVDKAEENQELCHKLNATAPGLLAKAIEKRGGWMIQISTDYVFDGTNHRPYTEDESV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++KL GE++V + +I+RTAW+YS FG+NF+ +M+RL KE+ E+ V+ DQ Sbjct: 121 CPNSTYGRTKLEGEQEVTNGCKRSMIIRTAWLYSTFGNNFVKTMIRLGKEKPELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I + GI+H + + G +SW DF + I + G Sbjct: 181 IGTPTYARDLAVAIFAAINQGI------VPGIYHFSNE-GVISWYDFTKAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V + T +YPT A RP YS LD +K+ T+NI I W+E + Sbjct: 231 NTCHVRPLHTSEYPTPAARPHYSVLDKTKIKQTYNIEIPYWEESL 275 >gi|37522803|ref|NP_926180.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Gloeobacter violaceus PCC 7421] gi|35213805|dbj|BAC91175.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Gloeobacter violaceus PCC 7421] Length = 300 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 156/296 (52%), Gaps = 13/296 (4%) Query: 1 MKC---LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 KC L+ G GQ+ + L ++ ++ + GR +D+ V+ N Sbjct: 8 QKCFMYLITGAGGQLGKELCALLEAREEPFVAYGRAQLDIADSGAVRQALEQSGAAVLFN 67 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYT VDKAE E E A +NA GA +A+A + G +++STDYVFDG + P E + Sbjct: 68 CAAYTRVDKAESEAEEAHRVNATGARVLAEACSAAGSRLVHVSTDYVFDGSACRPYPEDA 127 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT PL IYG+SK GE V ++++RTAWVY + G NF+ ++LRLA ER ++ VV Sbjct: 128 PTQPLGIYGQSKRDGEVAVLEGDGEHLVVRTAWVYGVGGPNFVRTILRLAGEREQLRVVA 187 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE- 235 DQ G+PT +A A++ + E GI+H+T + G SW DFA I E+ Sbjct: 188 DQVGSPTWTFDLAAALVGLTKAQAEG------GIYHVT-NSGVTSWYDFAVAIVEEAQAL 240 Query: 236 -RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R V I T +YPT A RPAYS L ++ + W++ +R +L + Sbjct: 241 GRALKLQSVVPITTAEYPTPAARPAYSVLSNTRALRVLGGPLPQWRQSLRRMLQQL 296 >gi|90962540|ref|YP_536456.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius UCC118] gi|90821734|gb|ABE00373.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius UCC118] Length = 278 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 156/294 (53%), Gaps = 21/294 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ K ++F P+V+ + AA Sbjct: 1 MKILITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKKAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF--S 116 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG +RT + Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDG-NRTSGEYLPDD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +ML LAK +++VV Sbjct: 120 PKGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVD 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT +A + + N IE G++H D G SW +FA+ I ++ Sbjct: 180 DQIGRPTWTRTLAEFLTYLVDNKIE------YGVYHCCND-GQCSWYEFAKEILKDTDVD 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + QYPT A RP YS + KLA WKE + L + Sbjct: 233 VQP------VTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|118580513|ref|YP_901763.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379] gi|118503223|gb|ABK99705.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379] Length = 280 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 106/284 (37%), Positives = 153/284 (53%), Gaps = 15/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LVIG NG + L ++ + V D+D+ + S P V+IN AAYT V Sbjct: 3 LVIGCNGMLGSDLMTLLEGRGRGVDV--RDLDITSLESTERLLTSLKPSVVINCAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E E A +NAEG +A+ IG + ISTDYVFDG +P E T PL++ Sbjct: 61 DGCESNRETAMLVNAEGVANLARVTRGIGARLVQISTDYVFDGAKGSPYLEDDQTAPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE A+ +++I+RT W+Y + G+NF+ +MLRL ER ++VV DQ G+PT Sbjct: 121 YGQSKLLGERNAAT-NPDHLIVRTQWLYGLQGNNFVETMLRLGTERECLTVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + ++RAI+ + RG +H A+ G SW +FA IF E+ G +V Sbjct: 180 WTVDLSRAILALLAR-------GCRGTYH-AANAGFCSWNEFARAIFREA----GLGVRV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T+Q A RP YS LDCSKL R+ +W + + + + Sbjct: 228 EPMTTEQLNRPAKRPLYSTLDCSKLERDTGFRLQSWGDALTDYM 271 >gi|254500084|ref|ZP_05112236.1| dTDP-4-dehydrorhamnose reductase [Labrenzia alexandrii DFL-11] gi|222441382|gb|EEE48060.1| dTDP-4-dehydrorhamnose reductase [Labrenzia alexandrii DFL-11] Length = 298 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 110/280 (39%), Positives = 151/280 (53%), Gaps = 4/280 (1%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ SL ++ + E++ R +IDL +SF D II+ AY Sbjct: 3 RILITGGTGQVGGSLGNLNWPEGTELVLPSRSEIDLGNADQISSFVRDGGFDAIISSGAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ AF +N A A+ A + IP ++ISTDYVF+G E P +P Sbjct: 63 TAVDKAEDDLLTAFKVNGLAPAAFAETAKELDIPVVHISTDYVFNGGKIGRYVETDPIDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SK AGE + S +VILRTAWV+S G+NF+ +M+RLA +R +++VV DQ G Sbjct: 123 QGVYGASKAAGELAIQSSGCRHVILRTAWVFSAIGANFVKTMIRLA-DRPQLTVVDDQTG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A IARA + + + D G++H D V+W FA IF R Sbjct: 182 CPTAAPDIARAAQAVVLRQLTDRDAP-SGVYHFCGDEA-VTWFGFASEIFRLLEARSLAV 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V I T+ YPT A RPA S LD S+L I W+ Sbjct: 240 PAVAPIPTRDYPTPAKRPANSALDTSRLTQDFGIEPCQWR 279 >gi|193222279|emb|CAL61334.2| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Herminiimonas arsenicoxydans] Length = 293 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 108/293 (36%), Positives = 155/293 (52%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ L EI+ + R +DL S P +IINPAAY Sbjct: 1 MKILLTGKTGQVGYELERTLQGLGEIVALDRQQMDLANLDQVRDVIRSVKPQLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE P++A INA+ G +A A +G I+ STDYVFDG E +P Sbjct: 61 TAVDLAESAPDLAMRINADAPGVMAAEAKKLGAAMIHYSTDYVFDGDKAESYTEEDVPHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + + ++ILRT+W+Y + G NFLL++ RLA+ER E+ +V DQFG Sbjct: 121 QSVYGRSKLAGEQAIQAAGIPHLILRTSWIYGLRGKNFLLTVQRLAQERDELRIVADQFG 180 Query: 181 TPTSALQI----ARAIIQI-----AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 PT + + A AI Q+ N+ + ++ G++H+TA G SW F + I Sbjct: 181 APTWSRTLAEVTAHAICQLQGGGTQANVDHAAWSAHSGLYHVTAQ-GRTSWHGFTQAIIA 239 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 S+ P KV I T+ YP A RP S L + R+ W+ ++ Sbjct: 240 HSSGLKQP--KVTPIATQDYPLPAKRPQNSVLSSQRFMQAF-CRLPEWEAALK 289 >gi|227891401|ref|ZP_04009206.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] gi|227866790|gb|EEJ74211.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] Length = 278 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 157/294 (53%), Gaps = 21/294 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKILITGANGQLGQEMQHLLDGRGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF--S 116 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG +RT + Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDG-NRTSGEYLPDD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +ML LAK +++VV Sbjct: 120 PKGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVD 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT +A + + N +E G++H D G SW +FA+ I ++ Sbjct: 180 DQVGRPTWTRTLAEFLTYLVDNKVE------YGVYHCCND-GQCSWYEFAKEILKDTDVD 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + QYPT A RP YS + KLA S WKE + L + Sbjct: 233 VQP------VTSDQYPTAAFRPHYSVM---KLAKETGFVFSDWKEALDEFLSEV 277 >gi|187934268|ref|YP_001887435.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B str. Eklund 17B] gi|187722421|gb|ACD23642.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B str. Eklund 17B] Length = 280 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ + + +D+E + + D+D+ K + L+ P+ +I+ AAYTA Sbjct: 3 LVTGVNGQLGYDVVKELNKRDIECLGIDIKDLDITDDKAVNEYILNLKPECVIHCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAEDE EI +N G IAKA I +YISTDYVFDGL P + NPL+ Sbjct: 63 VDKAEDEEEICTKVNVYGTENIAKACKEIDTKMVYISTDYVFDGLGDKPFEVDGNINPLS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK+K GE KV + Y I+R +WV+ I G+NF+ MLRL E+ ++VV DQ G+P Sbjct: 123 VYGKTKYKGELKVKEILDKYFIVRISWVFGINGNNFINIMLRLGAEKESLNVVSDQIGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A + + + G++H T + SWA+FAE I + G K Sbjct: 183 TYTADLAPLLCDMVI-------SEKYGVYHATNE-RTCSWAEFAEEIM----KMAGLNCK 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +YPTKA RP S L L + + WK + L + Sbjct: 231 INYIQTSEYPTKAVRPFNSRLSKKSLVDNGFELMPEWKNALERYLTEL 278 >gi|240144746|ref|ZP_04743347.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82] gi|257203267|gb|EEV01552.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82] Length = 291 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 24/293 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I G +D+ + + PDVI Sbjct: 4 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 63 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 64 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 123 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F +P++ YGK+K GE+ V + + Y I RTAW+Y G NF+ +MLRLA+ E+SV Sbjct: 124 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYGD-GKNFVKTMLRLAESHDEVSV 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++ARAI H+ T G FH T + G +WA FAE IF Sbjct: 183 VCDQQGSPTSAVELARAI----HHF---EPTENYGTFHATCE-GDTNWAAFAEAIF---- 230 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +R G +KV + ++QY P A+RPAYS L+ + T +++ W++ + Sbjct: 231 KRAGKTTKVNHVTSEQYAKMNPASANRPAYSILENYMMKLTDGYKMAEWQDAL 283 >gi|52696135|pdb|1VL0|A Chain A, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution gi|52696136|pdb|1VL0|B Chain B, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution gi|52696137|pdb|1VL0|C Chain C, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution Length = 292 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 111/284 (39%), Positives = 154/284 (54%), Gaps = 14/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ + + ++VE+I D+D+ FF P+V+IN AA+ Sbjct: 14 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAH 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK E++ ++A+ INA G +A AA S+G + ISTDYVFDG ++ PI EF NP Sbjct: 74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNP 133 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGK+KL GE V + Y I+RTAW+Y G+NF+ + + L K E+ VV DQ G Sbjct: 134 QSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTXINLGKTHDELKVVHDQVG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTS + +AR ++++ D G FH T G SW DFA IF G Sbjct: 193 TPTSTVDLARVVLKVI-------DEKNYGTFHCTCK-GICSWYDFAVEIF----RLTGID 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV T+++P A RP YS L L T WKE ++ Sbjct: 241 VKVTPCTTEEFPRPAKRPKYSVLRNYXLELTTGDITREWKESLK 284 >gi|229016573|ref|ZP_04173513.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1273] gi|229022780|ref|ZP_04179304.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1272] gi|228738592|gb|EEL89064.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1272] gi|228744749|gb|EEL94811.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1273] Length = 284 Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ +P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDVTNISRVQQVVQEINPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA IA A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYLINAIGARNIAVASQLVGAKLVYISTDYVFQGDRPDGYDEFYSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGKNFVKTMMRLGKEREELSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMIINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFLYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS S L ++S+W+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHSMLRLNGFAQMSSWEEGLERFFI 279 >gi|291534624|emb|CBL07736.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis M50/1] Length = 290 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 24/293 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I G +D+ + + PDVI Sbjct: 3 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 63 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 122 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F +P++ YGK+K GE+ V + + Y I RTAW+Y G NF+ +MLRLA+ E+SV Sbjct: 123 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYGD-GKNFVKTMLRLAESHDEVSV 181 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++ARAI H+ T G FH T + G +WA FAE IF Sbjct: 182 VCDQQGSPTSAVELARAI----HHF---EPTENYGTFHATCE-GDTNWAAFAEAIF---- 229 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +R G +KV + ++QY P A+RPAYS L+ + T +++ W++ + Sbjct: 230 KRAGKTTKVNHVTSEQYAKMNPASANRPAYSILENYMMKLTDGYKMAEWQDAL 282 >gi|149925746|ref|ZP_01914010.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105] gi|149825863|gb|EDM85071.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105] Length = 337 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 114/315 (36%), Positives = 163/315 (51%), Gaps = 29/315 (9%) Query: 1 MKCLVIGNNGQIAQSLSS------MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 ++ LV+G GQ+ ++ M D I GR DL K + PDV+ Sbjct: 25 IRVLVLGAQGQLGHTIGQHAKPALMETMDA-CISYGRDKADLSKLDTLINALKDIRPDVV 83 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYT V+KAE E E+A +INA+ G +A+ G+ ++ STDYVFDG + P E Sbjct: 84 INAAAYTNVEKAETETELAHTINAKAVGILAEQCKKQGVALVHYSTDYVFDGKASQPYTE 143 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNPL+ YGKSKL GE+ + N+V+ RT+WVY G+NF +M++LA+ER + V Sbjct: 144 TDATNPLSAYGKSKLEGEKYLKEVGGNWVVFRTSWVYGQRGNNFCRTMIKLAQERDTLKV 203 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIEN-----------------SDTSLRGIFHMTADG 217 V DQ G PT A +A + +A + + S+ IFH +A Sbjct: 204 VDDQTGAPTPANWLAELGLTVAGVVAMHRYKTMGKLAPTFLPDFPSEIPSGEIFHASA-A 262 Query: 218 GPVSWADFAEYIFWESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 G +W D+A + E+A + G + + R T A RPAYS LD +KL NT + Sbjct: 263 GVTTWFDYA-CLAIENAHKQGIVQRMPNIERASTSSMNFAAQRPAYSVLDNTKLMNTFRV 321 Query: 275 RISTWKEGVRNILVN 289 W +GVRN ++N Sbjct: 322 NPPEWTKGVRNFVLN 336 >gi|254516000|ref|ZP_05128060.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR5-3] gi|219675722|gb|EED32088.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR5-3] Length = 298 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 161/291 (55%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G GQ+ +L +E+ + R D D+ + + PD++IN AAYT Sbjct: 8 KVMISGAAGQLGSALCLSAPPSIELCALSRADCDISDSTAVEAALDAQRPDLLINAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE+E AF+ NAE G +A+A + GI ++STD+VFDGL +P E + T PL Sbjct: 68 AVDRAEEESAAAFAANAEAPGTLARACAARGIRFFHVSTDFVFDGLRSSPYPEDAATAPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AGE+ + +ILRT WVYS G NF+ +MLRL EISVV DQ GT Sbjct: 128 GVYGESKRAGEQATLDSGADCLILRTGWVYSHDGQNFMRTMLRLHGSHDEISVVADQVGT 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GP 239 PT AL +A A+ AH L GI+H + D G SW DFA I E+ G Sbjct: 188 PTDALSLAGALWAAAHR------PGLSGIYHWS-DAGVCSWYDFALAIGEEAFALGLLPK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I TK YPT A RPAYS LD ++ I + W+ +R +L + Sbjct: 241 VAAVKPIRTKDYPTPAQRPAYSVLDKTRSWQDFEIPPTHWRSQLRAVLTRL 291 >gi|313202901|ref|YP_004041558.1| dtdp-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] gi|312442217|gb|ADQ78573.1| dTDP-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] Length = 290 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 11/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + + + I ++D+ + ++I+N AA Sbjct: 3 KILVTGANGQLGNEMRKLAPISKTNTFIFTDIEELDITNQEAIRILIQQEQIEIIVNCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ E+A IN + +A +G I++STDYVF G TP E TN Sbjct: 63 YTNVDKAEDDSEMANLINNKAVENLAIVCQDVGATLIHVSTDYVFQGTKNTPCREDEQTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++KLAGE+ V + Y+I RTAW+YS FGSNF+ +M+RL ER ++SVV DQ Sbjct: 123 PLGVYGQTKLAGEQSVQNSGCKYLIFRTAWLYSAFGSNFVKTMIRLTDEREKLSVVFDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A I Q IE +L GI+H + + G SW DFA I +A Sbjct: 183 GTPTYAGDLAALIFQT----IETKQYETLNGIYHYSNE-GVCSWYDFAIEI---AALAAH 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + ++P+K RPA+S LD +K+ N ++ WK ++ + Sbjct: 235 DTCDIQPCHSDEFPSKVKRPAFSVLDKTKVKADFNCKVPHWKVSLQKCM 283 >gi|13650069|gb|AAK37552.1|AF349575_3 putative dTDP-4-rhamnose reductase [Azospirillum brasilense] gi|46241699|gb|AAS83084.1| putative dTDP-4-rhamnose reductase [Azospirillum brasilense] Length = 309 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 119/293 (40%), Positives = 162/293 (55%), Gaps = 6/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ L + + + R D+ K ++ + P +++N +A Sbjct: 9 LPVLVFGANGQVGFELRRAAWAPGLAPLGLDRASGDVTDAKAVSAAIAAHRPALVVNASA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPT 118 YTAVDKAE E + AF++N +G +A+A + G+P I+ISTDYVFDG S+T P E P Sbjct: 69 YTAVDKAESERDTAFAVNRDGPANLARACAAAGVPLIHISTDYVFDGTSKTTPWSESDPV 128 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +Y SKLAGEE V ++VILRTAWV+ G NF+ +MLRLA+ER E+ VV DQ Sbjct: 129 APQGVYAASKLAGEEAVRDAQPDHVILRTAWVFGAHGHNFVKTMLRLARERDELRVVADQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT A IA AI IA + + G FH G P +W FAE I +A R Sbjct: 189 HGCPTPAAAIAAAIATIAQARLTGEGWTP-GTFHY--GGAPATTWHGFAERIVDRAAARI 245 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V I T +PT A RPA S LD ++L + I + W G+ +L +I Sbjct: 246 GRRPAVTAITTADFPTPARRPANSVLDTARLGQAYGIPPADWMAGLDRVLDDI 298 >gi|291520151|emb|CBK75372.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio fibrisolvens 16/4] Length = 286 Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 163/296 (55%), Gaps = 23/296 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP------KDFASFFLSFSPDVII 55 K LV G NGQ+ +++ + +VE I + + + P + SF + PDVII Sbjct: 3 KILVTGCNGQLGRAIQNEYKDEVEFILTDVVEGEKISPLNIMDLDEVLSFVEAKKPDVII 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA T VD E + + A+ +NA G +A AA +G +++STDYVF G +PI EF Sbjct: 63 NCAAATNVDGCEKDWDFAYKLNALGPRNLAIAASKVGAKLVHVSTDYVFPGNGSSPITEF 122 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P++ YGK+K GE+ V + + + I+RTAW+Y G NF+ +ML LA+ E+SVV Sbjct: 123 DQPAPISAYGKTKYEGEKFVQQFADKWFIVRTAWLYGD-GKNFVKTMLSLAETHDELSVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 CDQ G+PTSA+++AR I H+L T GIFH T +G +WADF E IF Sbjct: 182 CDQLGSPTSAVELARMI----HHL---EPTENYGIFHGTCEGD-TNWADFTEEIF----R 229 Query: 236 RGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G KV + +++Y P A RP YS LD L T R++ WK+ + L Sbjct: 230 LKGINVKVNHVTSEEYKRMNPASADRPHYSILDNYMLRLTSGYRMADWKDALAEYL 285 >gi|330368663|gb|AEC11784.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] Length = 286 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 105/271 (38%), Positives = 148/271 (54%), Gaps = 19/271 (7%) Query: 5 VIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +IG NG +AQ L ++E +ID+ +F + IIN +AYT V Sbjct: 4 IIGKNGMLAQDILQVFNKNNIEYTSTA-SNIDITNIDILNNFIKDKNIKTIINCSAYTKV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AEDE +I + +N EG I + A +I I+ STDYVFDG + P +E TNP+NI Sbjct: 63 DLAEDEKDICYKVNGEGVKNITEIASNINADLIHFSTDYVFDGENNKPYNEEDKTNPINI 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKL GE+ SY N +++R +W+Y I+G NF+ +M+ L + I VV DQFG+PT Sbjct: 123 YGKSKLEGEKYALSY-NKSIVIRVSWLYGIYGKNFVYTMINLMNSKESIKVVNDQFGSPT 181 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS-- 241 +A I I N + G++H T + G +SW DFA+ I+ +G Y+ Sbjct: 182 YTEDVAMVIYDIIKN-----NNFYYGLYHYTNE-GDISWYDFAKTIY----NKGKEYNII 231 Query: 242 ----KVYRIFTKQYPTKAHRPAYSCLDCSKL 268 KV T++YPTKA RP YS L K+ Sbjct: 232 NNDCKVNPCTTEEYPTKAKRPKYSVLSVEKI 262 >gi|237711070|ref|ZP_04541551.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA] gi|229454914|gb|EEO60635.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA] Length = 287 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 159/287 (55%), Gaps = 14/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP---DVIINP 57 M LV G NGQ+ + M D++ L DF + + +I+N Sbjct: 1 MNVLVTGANGQLGNEMRLMAQNSSH--HYIFTDVEELDITDFNAILQTVKEKEIQIIVNC 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT VDKAE++ +IA ++N G +A A + I+ISTDYVF+G + P E Sbjct: 59 AAYTNVDKAENDFDIANALNNIAVGRLANVAKAQNATLIHISTDYVFNGNNHIPYTEDDI 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T+P+ +YGK+KLAGEE + NY+ILRTAW+YS +G+NF+ +M +L E+ +SV+ D Sbjct: 119 TDPIGVYGKTKLAGEETIKKVGCNYIILRTAWLYSKWGNNFVKTMQKLTLEKDILSVIFD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A +A AI I IE + + +GI+H + + G SW DFA+ E E Sbjct: 179 QIGSPTYAKDLAHAISLI----IERNMLNQQGIYHYSNE-GVCSWFDFAK----EICELS 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G + I ++ YP+K RP YS LD +K T I + WK+ ++ Sbjct: 230 GHNCNITPIHSQDYPSKVTRPHYSVLDKTKFKETFGIPVPYWKDSLK 276 >gi|300215155|gb|ADJ79571.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius CECT 5713] Length = 278 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 111/294 (37%), Positives = 155/294 (52%), Gaps = 21/294 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKVLITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF--S 116 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG +RT + Sbjct: 61 YTAVDKAEGECKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDG-NRTSGEYLPDD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P N YGK+KLAGEE V Y N Y I+RTAWVY +G NF+ +ML LAK +++VV Sbjct: 120 PKGPRNEYGKAKLAGEEAVQKYCNKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVD 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT +A + + N IE G++H D G SW +FA+ I + Sbjct: 180 DQVGRPTWTRTLAEFLTYLVDNKIE------YGVYHCCND-GQCSWYEFAKEILKNTDVD 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + QYPT A RP YS + KLA WKE + L + Sbjct: 233 VQP------VTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|54293741|ref|YP_126156.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens] gi|53753573|emb|CAH15028.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens] Length = 294 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 158/290 (54%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVSPCTRDILDCFKLERVQDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + IP I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCSFKNIPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ+ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PTSA IAR + +I I +S G++H A G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-ISHSSFDYWGLYHY-AGQGVTNWHEFANVFLNMAKEKQLL 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ Sbjct: 239 LTLTDLNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVI 288 >gi|167586361|ref|ZP_02378749.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ubonensis Bu] Length = 302 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG GQ+ L + E+ V R +DL P + PDVI+N AAY Sbjct: 1 MRILLIGKRGQLGWELQRSLLPLGEVFAVDRQTLDLSSPLTIGPAIAAIRPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E+A +NA G +A AA + ++ STDYVFDGL+ P E +P Sbjct: 61 TAVDEAETHHELATMVNATAVGELAVAARKLNALLLHYSTDYVFDGLAEVPYREEVRPDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ +A ++++ RT+WVY G NFL ++ + A E+ + VV DQ G Sbjct: 121 QTVYGRSKLAGEQAIADSGADWLVFRTSWVYGTNGRNFLRAIAKAACEQDALRVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 TPT+ +A +Q +I+ + D S G++H+T G +W FA+ I + RG Sbjct: 181 TPTAVRVLADLSVQALRTVIQLRRSGDLSKLGLYHLTLR-GETTWHGFAQAIVCGMSARG 239 Query: 238 GP---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I + A RP YS LDCS+ + W + + +L ++ Sbjct: 240 VHDLRATRVDEITSSDLTRAARRPKYSVLDCSRFDAAFELARPAWDQALEIVLDDM 295 >gi|2500164|sp|Q46769|RMLD_ECOLX RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|799233|gb|AAC63613.1| RmlD [Escherichia coli] Length = 301 Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+T VDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P + Sbjct: 61 AAAHTDVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQGGT 120 Query: 117 -PTNPLNIYGKSKLAGEEK-VASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T PLN+YG++KL+ E+K + + ++I RT+WVY+ G+NF +MLRLAKER E++V Sbjct: 121 DATAPLNVYGETKLSSEKKALQKHCGKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E A Sbjct: 181 INDQFGRPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVF-EEA 236 Query: 235 ERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G +K+ + T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 237 RKAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 292 >gi|300775247|ref|ZP_07085109.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium gleum ATCC 35910] gi|300505987|gb|EFK37123.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium gleum ATCC 35910] Length = 287 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 149/286 (52%), Gaps = 13/286 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC---VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K VIG+NGQ+ + + E + +D+ + FF PD IN + Sbjct: 3 KIAVIGSNGQLGNCIKKIAPDFEHQYEFLFTDSSTLDVTSEEQVNDFFYENKPDYCINAS 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE E E AF++NA+G +A+A I++STDYVFDG + P E T Sbjct: 63 AYTAVDLAEKEKEKAFAVNADGVAHLAQACAEYKSTLIHVSTDYVFDGTTNLPYSEDDFT 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ +YG+SK GEE +ILRT+W+YS F NF+ +ML L ++ E+ +V DQ Sbjct: 123 NPVGVYGESKRKGEELALEINPKTIILRTSWLYSEFNKNFVKTMLHLFSQKDELGIVADQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT+A +A AI+QI + GIFH ++ +W +FA+ I AE Sbjct: 183 FGQPTNANDLAEAIMQIIQ-----TPQKTYGIFHF-SNYPETTWFEFAKKI----AEFSK 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 K+ I T QYPT A RP S + K+ T+ I W+ + Sbjct: 233 SPVKLNAITTDQYPTPAKRPVRSTMSLDKIEETYKIEPKHWENSLE 278 >gi|168216435|ref|ZP_02642060.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC 8239] gi|182381469|gb|EDT78948.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC 8239] Length = 294 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 160/302 (52%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ +++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E+ + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCENNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E AE V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM-ELAENK---CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|13539633|gb|AAK29184.1| unknown [Aggregatibacter actinomycetemcomitans] Length = 233 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 106/233 (45%), Positives = 138/233 (59%), Gaps = 10/233 (4%) Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A TAVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E Sbjct: 1 APTAVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAA 60 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P IYGK+KLAGE+ VA + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 61 DPQGIYGKTKLAGEQAVAEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQ 120 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT A IA A+IQIA +I GI+H T G P VSW DFA IF E+ + Sbjct: 121 IGGPTYAGDIAAALIQIAEKIIAGESVEY-GIYHFT--GEPYVSWCDFARAIFDEAVSQN 177 Query: 238 ----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 178 MLEKAPL--VNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 228 >gi|228920042|ref|ZP_04083391.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839498|gb|EEM84790.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 284 Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYAFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 VNIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|317487715|ref|ZP_07946311.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316913172|gb|EFV34685.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 300 Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 29/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + EI+ ++D+ ++ Sbjct: 1 MRILVTGGNGQLGNELQRILREGRSEIGPIPDAYAGAEIVAADVDELDVTDADAVMAYVA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA+++G + +STDYVF G Sbjct: 61 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAVGAKLVQVSTDYVFPGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + + ++RTAW+Y G NF+ +M+RL Sbjct: 121 EPEPRVEDDPTGPVSAYGRTKLAGEERSLAACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFAE Sbjct: 181 DRDEVTVVDDQLGNPTSANDLAHEILKIAS-------TEDYGVYHCTNE-GTCSWADFAE 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + E G V R +++Y P A RPAYS L +L +T + W++ + Sbjct: 233 AVM----EGAGLDCAVIRCTSEEYAAMNPASAKRPAYSSLRNKRLEDTVGNEMRPWRDAL 288 Query: 284 RNILVNI 290 L N+ Sbjct: 289 SAYLNNL 295 >gi|260911585|ref|ZP_05918170.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634291|gb|EEX52396.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 282 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 110/293 (37%), Positives = 160/293 (54%), Gaps = 14/293 (4%) Query: 1 MKCLVIGNNGQIAQS---LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M L+ G NGQ+ L +MC Q ++D+ F S I+N Sbjct: 1 MNILITGCNGQLGNEIKLLQAMCAQHT-WFNTDVNELDITDKAAIEHFVESNEIGGIVNC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + +A +NA+ +A+A G + +STDYVFDG TP E Sbjct: 60 AAYTAVDKAESDLLLARELNADAPAFLAEAVAKRGGWMVQVSTDYVFDGTKHTPYVESDE 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YG++KL GE+ VA + N +I+RTAW+YS FG+NF+ +M+RL KER ++ V+ D Sbjct: 120 PCPNSVYGQTKLEGEQAVAKFCPNSMIIRTAWLYSEFGNNFVKTMIRLGKEREQLGVIFD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI+ I+ GI+H + + G SW DF + I S G Sbjct: 180 QVGTPTYAHDLATAIMTAIDKGIK------PGIYHFSNE-GVTSWYDFTKSIHRLS---G 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YPT A+RP+YS LD +K+ T+ I I W+E + + + Sbjct: 230 ITTCQVSPLHTVEYPTPANRPSYSVLDKTKIKTTYGIEIPHWEESLAKCIAKL 282 >gi|221201087|ref|ZP_03574127.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221206461|ref|ZP_03579474.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221173770|gb|EEE06204.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221178937|gb|EEE11344.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 300 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/288 (38%), Positives = 146/288 (50%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTAV Sbjct: 10 LLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + +A +NAE +A+ A IG I+ STDYVF G P E +P N+ Sbjct: 70 DQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKAGPYVEDDAVDPQNV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E+ VV DQ G PT Sbjct: 130 YGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELKVVADQIGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSLR-------GIFHMTADGGPVSWADFAEYIFWESAER 236 + IA I SD GI+H+ A G SW FAE IF S Sbjct: 190 WSNTIATLTAHILAQAAGVSDADRHAWWRERSGIYHLCASGS-TSWHGFAEAIFDSSRLV 248 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P KV I YPT A RPA S + +KL+ T I W + +R Sbjct: 249 RKP--KVKPIPASAYPTPAARPANSRMSGAKLSRTFGICAPDWHDALR 294 >gi|325830486|ref|ZP_08163941.1| dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] gi|325487468|gb|EGC89908.1| dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] Length = 302 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 106/307 (34%), Positives = 160/307 (52%), Gaps = 29/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + EI+ ++D+ ++ Sbjct: 3 MRILVTGGNGQLGNELQRILREGRSEIGPIPDAYAGAEIVAADVDELDVTDADAVMAYVA 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA+++G + +STDYVF G Sbjct: 63 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAVGAKLVQVSTDYVFPGT 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + + ++RTAW+Y G NF+ +M+RL Sbjct: 123 EPEPRVEDDPTGPVSAYGRTKLAGEERSLAACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFAE Sbjct: 183 DRDEVTVVDDQLGNPTSANDLAHEILKIAS-------TEDYGVYHCTNE-GTCSWADFAE 234 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + E G V R +++Y P A RPAYS L +L +T + W++ + Sbjct: 235 AVM----EGAGLDCAVIRCTSEEYAAMNPASAKRPAYSSLRNKRLEDTVGNEMRPWRDAL 290 Query: 284 RNILVNI 290 L N+ Sbjct: 291 SAYLNNL 297 >gi|222109770|ref|YP_002552034.1| dtdp-4-dehydrorhamnose reductase [Acidovorax ebreus TPSY] gi|221729214|gb|ACM32034.1| dTDP-4-dehydrorhamnose reductase [Acidovorax ebreus TPSY] Length = 296 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/303 (35%), Positives = 160/303 (52%), Gaps = 21/303 (6%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDID-------LLKPKDFASFFLSFSPD 52 M L++G +GQ+ L S+ V + RV D D P+ + PD Sbjct: 1 MNILLLGKSGQVGWELQRSLAV----LGRVTALDHDSTEHCGDFANPEGVRETVRALRPD 56 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EPEIA +NA G +A+ A +G ++ STDYVFDG P Sbjct: 57 VIVNAAAHTAVDKAESEPEIARLLNATTPGVLAEEAARLGTWLVHYSTDYVFDGSGTRPW 116 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E PL++YG +KL GE+++ ++ILRT+WVY+ G NF +MLRL ER + Sbjct: 117 VETDAPAPLSVYGATKLEGEQRIQQTGCRHLILRTSWVYAARGGNFAKTMLRLGSERERL 176 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +V+ DQ+G PT A +A +L S G++H A G +W +A+Y+ E Sbjct: 177 TVIDDQWGAPTGADLLADVTAHAVRHL--QSRPGDGGLYHCVAS-GETNWHSYAKYVL-E 232 Query: 233 SAERGGP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A + P ++V + T +PT A RP S LD ++L T + + W++GV +L Sbjct: 233 HARQAQPAIELKATEVAPVPTSAFPTPARRPHNSRLDTTRLQTTFGLVLPPWQQGVARML 292 Query: 288 VNI 290 I Sbjct: 293 TEI 295 >gi|94497767|ref|ZP_01304334.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas sp. SKA58] gi|94422816|gb|EAT07850.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas sp. SKA58] Length = 285 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + L + D ++ V ++D+ +F PD+I+N AAY Sbjct: 1 MKTLITGAKGQLGRGLQATAPADATLLCVDVDELDITDSVAVGAFVTREKPDLILNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E + A +IN G +A AA S+G +++STD+VFDG + P + T P Sbjct: 61 TAVDRAETEEDAAMAINGIATGTLADAARSVGARFVHVSTDFVFDGRAGIPYAPDAQTAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ YG++KLAGE+ + +I+RTAWVY+ G NF+ +MLRL ER E+ VV DQ G Sbjct: 121 LSAYGRTKLAGEQLAGP---DALIVRTAWVYAPTGGNFVRTMLRLMAERPEVRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 TPT A +A A+ +A + GI H T D G SW DFA I E G Sbjct: 178 TPTYAPGLASALWTMAGK-------GVSGIHHYT-DSGAASWYDFAVAIQEEGLASGLLS 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T YPT A RP S LD + + W+ +R ++ I Sbjct: 230 QEARIVPIPTSAYPTPAARPHCSVLDKASTFDALGGPTPHWRANLRVMMQAI 281 >gi|228961526|ref|ZP_04123136.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798144|gb|EEM45147.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 284 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + Q +E+ +G D+D+ F PD II+ AA Sbjct: 1 MKILVTGYNGQLGYDVVKRGEKQGLEMQGIGIEDLDITNEAAVYEFVDKVKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDK+ED+ E+ +++N EG + AA + +YISTDYVFDG E N Sbjct: 61 YTAVDKSEDDKELCWNVNVEGTKYLTTAAKKLNAKFVYISTDYVFDGEGTHAFVETDAPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GE+ V S +N I+R +WV+ I G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVGYYGLTKHEGEKVVRSLIDNNFIVRISWVFGINGNNFIKTMLRLGETRNELNVVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SWA+FA+ IF + G Sbjct: 181 GSPTYTYDLARLLVDMVV-------TEKYGTYHATNE-GFCSWAEFAQEIF----KIAGQ 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT+A RP S + KL + + WK+ ++ + + Sbjct: 229 DVKVNSITTEEYPTRAVRPKNSRMSKQKLIDNGFEPLQDWKKATKHYITQL 279 >gi|88860051|ref|ZP_01134690.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas tunicata D2] gi|88818045|gb|EAR27861.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas tunicata D2] Length = 289 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 168/295 (56%), Gaps = 21/295 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+AQ+L + ++E++ VG + D+ + S F P+VIIN AAYT Sbjct: 7 KVLIIGRKGQLAQALLATKKANIEVLVVGSNEFDVTQLGTLRSIINQFKPEVIINAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE PE A+ INA+ +AK I I +STDYVFDG +TP PL Sbjct: 67 AVDLAESNPERAYLINADLVTFLAKICQLQRIRFIQLSTDYVFDGEQQTPYTVGDLPKPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SK AGE V ++ ++ ++RT+W+YS+ G+NFLL+MLRL +ER + +V DQ G Sbjct: 127 NVYGASKRAGEMAVLTHCPDFGSVVRTSWLYSLCGNNFLLTMLRLMQERPALEIVNDQVG 186 Query: 181 TPTSALQIAR---AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 +PTSA+ +A ++I + + L I+H + G SW DFA I A Sbjct: 187 SPTSAITLADFLWSLIDLPNWL---------PIYHFSGQGQG-SWFDFAVEI-QHVAHSA 235 Query: 238 GPYS---KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G S + I + Q+ T A RP YS LDCS +++R W+E + N+L+N Sbjct: 236 GLLSYLIPIKPICSAQFHTAAIRPCYSVLDCSGSNGIYHMR--PWQETL-NVLLN 287 >gi|160863320|gb|ABX51886.1| dTDP-6-deoxy-L-mannose dehydrogenase [Cronobacter sakazakii] Length = 300 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 153/291 (52%), Gaps = 11/291 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV--GRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 L+ G NGQ+ L +I + D D P+ A PDVI+N AA Sbjct: 6 LLFGKNGQVGWELQRALAPLGNLISLDFNSEDYCGDFSNPEGVAETVRRIKPDVIVNAAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAE E E A +NA AIA+ A I I+ STDYVF G TP E T Sbjct: 66 HTAVDKAESEREFAQLLNATSVEAIAREAAKINAWLIHYSTDYVFPGTGETPWCESDATA 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++KLAGE+ V + N++I RT+WVY+ G+NF +MLRLAKER +SV+ DQ+ Sbjct: 126 PLNVYGETKLAGEQAVQRFCPNHLIFRTSWVYAGKGNNFAKTMLRLAKERESLSVINDQY 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG- 238 G PT A +A + D + G++H+ A G +W DFA +F + A + G Sbjct: 186 GAPTGAELLADCTAHAIRVALTKPDVA--GLYHLVAS-GVTTWYDFAALVF-DQARKAGI 241 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + T YPT A RP S L+ K + + W GV+ +L Sbjct: 242 TLKLTDLQPVPTSAYPTPACRPQNSRLNTMKFQQQFGLVLPQWDMGVKRML 292 >gi|224369262|ref|YP_002603426.1| RfbD [Desulfobacterium autotrophicum HRM2] gi|223691979|gb|ACN15262.1| RfbD [Desulfobacterium autotrophicum HRM2] Length = 291 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 159/287 (55%), Gaps = 16/287 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ Q + + ++ + G D+D+ P +P+V+IN AAY Sbjct: 1 MRILICGGTGQLGQDCTRVFNKNHSVQSFGSRDLDISDPDLVERTIRELAPEVVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPT 118 T VD ED + AF +NA GA +A++ ++ ++ISTDYVFDG P+ E PT Sbjct: 61 TNVDGCEDNRDHAFHVNAVGAENLARSCRTVDALMVHISTDYVFDGKKEPPLTYAETDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR--LAKERREISVVC 176 PLN+YG SKL GE++VA+ +I+RTAW+Y G+NF+ ++L+ L + I VV Sbjct: 121 APLNVYGASKLEGEKRVAALLEKQIIVRTAWLYGAQGNNFIKTILKLTLGNPEKTIRVVD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG+PT L++A + ++ + RGIFH TA+ G SW +FA Y ++ Sbjct: 181 DQFGSPTWTLRLALQLERLV-------EADGRGIFHATAE-GYCSWYEFATYFL----KK 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + T++YP A RP S LD ++L + R++ W+ GV Sbjct: 229 MDVSHNIIACTTQEYPLPATRPFNSILDNARLKQKNMNRMTGWRHGV 275 >gi|75759811|ref|ZP_00739888.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899902|ref|ZP_04064146.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] gi|228906954|ref|ZP_04070821.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|74492711|gb|EAO55850.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228852702|gb|EEM97489.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|228859742|gb|EEN04158.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] Length = 284 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYTNMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|330815728|ref|YP_004359433.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] gi|327368121|gb|AEA59477.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] Length = 298 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 11/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ +I + R +DL +P+ P +I+NPAAYTAV Sbjct: 9 LLTGINGQVGYELARSLQGLGRVIALDRQALDLSEPESIRRVVREIEPQLIVNPAAYTAV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + A +N E A+ A +G ++ STDYV+ G E P P N+ Sbjct: 69 DQAETDVAAATRLNVEVPAVFAEEAKRVGAALVHYSTDYVYAGEGERRYVETDPVGPRNV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE + + ++ILRT+WVY + G NFL +MLRL ER E++VV DQ G PT Sbjct: 129 YGRTKLDGERAIVASGCRHLILRTSWVYGMRGRNFLKTMLRLGAERDELNVVADQIGAPT 188 Query: 184 SALQIARAIIQIAHNLIENSDTS------LRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + IA I + TS GI+H+ A G SW FAE IF AE G Sbjct: 189 WSRTIADLTAAILAQSVATGCTSDDWWTNHSGIYHLAA-AGETSWHGFAEAIF---AESG 244 Query: 238 GPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G + R I YPT A RP+ S L KL + + + W+E +R Sbjct: 245 GERRPLVRPIPASAYPTPATRPSNSRLSMDKLERSFGLTVPDWREALR 292 >gi|182625742|ref|ZP_02953510.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens D str. JGS1721] gi|177909004|gb|EDT71486.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens D str. JGS1721] Length = 294 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 159/302 (52%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ +++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELKSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E AE V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM-ELAENK---CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|332529598|ref|ZP_08405554.1| dTDP-4-dehydrorhamnose reductase [Hylemonella gracilis ATCC 19624] gi|332040948|gb|EGI77318.1| dTDP-4-dehydrorhamnose reductase [Hylemonella gracilis ATCC 19624] Length = 300 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 160/305 (52%), Gaps = 21/305 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF------FLSFSPDVI 54 MK L+ G NGQ+ L E+I V R +D L D + + P VI Sbjct: 1 MKILLFGKNGQVGWELQRSLAPLGEVIAVDRVGVDGLC-GDLSDLDCLQRTVRAVQPQVI 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVD AE + A+ INAE G +A+AA ++ STDYVFDG P E Sbjct: 60 VNAAAYTAVDLAETDVAAAYRINAEAPGVLARAAAQHDALLVHYSTDYVFDGSGERPWRE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 PL++YG++KL GE+ + + + ++I RT+WVY+ G NF +MLRLA E+ E+ Sbjct: 120 DDAPAPLSVYGRTKLEGEQAIRASSCRHLIFRTSWVYAARGDNFAKAMLRLAVEQDELRA 179 Query: 175 VCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + DQ G PT A +A I ++ N ++ GI+H+ A G SW D+A ++ + Sbjct: 180 INDQLGAPTGADLLADVTAHAIRWVVLANDGSAASGIYHL-ASAGEASWFDYARFVLAHA 238 Query: 234 AERGGPYSKVYRIFTKQ--------YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++G +V ++ +Q YP A RP S LDC++L T + + W+ G+ Sbjct: 239 QQKG----RVLKVAPQQVRAIPASAYPGSARRPHNSRLDCTRLRQTFGLALPPWQSGMTR 294 Query: 286 ILVNI 290 +L I Sbjct: 295 MLDEI 299 >gi|119357789|ref|YP_912433.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM 266] gi|119355138|gb|ABL66009.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM 266] Length = 290 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 114/297 (38%), Positives = 161/297 (54%), Gaps = 23/297 (7%) Query: 1 MKCLVIGNNGQIAQSLSSM---------CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP 51 M LV G NGQ+ L S+ C D+ PD+D+ + + Sbjct: 1 MNILVTGGNGQLGSELRSLQRDYPAWMFCFCDL-------PDLDITDSNAVDALMRTCKC 53 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +VI+N AAYTAVD+AE EP A+ +N +GAG +A A + I+ISTDYVFDG S P Sbjct: 54 NVIVNCAAYTAVDQAEQEPGRAYRVNRDGAGVLAACAKAHHALLIHISTDYVFDGNSCLP 113 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E PL IYGKSK A EE + +++ILRT+W+YS++G NFL +MLRL E+ Sbjct: 114 YRETDRPAPLGIYGKSKRAAEELIFEIAPSFLILRTSWLYSLYGHNFLKTMLRLGAEKDV 173 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 I V+ DQ GTPT A +ARAI+ I + D ++H + + G SW DFA I Sbjct: 174 IKVIFDQTGTPTYAGDLARAIMTILGKV--RLDEQYGALYHYSNE-GVCSWYDFAVAIM- 229 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 A + P KV I T +YP + RP +S L+ S + + I W++ + ++L+ Sbjct: 230 --ALKKLP-CKVLPIETTEYPLPSPRPFFSVLNKSAIKRDWGLVIPYWRDSLESVLL 283 >gi|307720180|ref|YP_003891320.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] gi|306978273|gb|ADN08308.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] Length = 289 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 113/287 (39%), Positives = 155/287 (54%), Gaps = 12/287 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + R +D+ K F + IIN AAYT Sbjct: 5 LITGANGQVGSELKELSCKYNAYNFFFTDRETLDITDNKAVKKFIEDNHINTIINTAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ A IN +A+ + I I+ISTDYVFDG + P E TNP Sbjct: 65 AVDKAEDDVTNADKINHLAVKNLAQISKEKDIKLIHISTDYVFDGKNYKPYTEIDETNPN 124 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGK+KL GE+ + N +I+RT+WVYS FG+NF+ +MLRL KER + V+ DQ G Sbjct: 125 GVYGKTKLDGEKVLQEIKPKNSIIIRTSWVYSSFGNNFVKTMLRLGKERDGVGVIFDQVG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A+ I+ I I+NS I+H + + G +SW DFA+ I Sbjct: 185 TPTYARDLAKTILDIIPK-IQNSKLE---IYHYSNE-GVLSWYDFAKEII----RMAKLD 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I TK+YPT A RP YS L+ +K+ T N+ I WK+ + L Sbjct: 236 CKINPIETKEYPTPAARPYYSLLNKAKIKQTFNVIIPYWKDSLDTCL 282 >gi|218130285|ref|ZP_03459089.1| hypothetical protein BACEGG_01873 [Bacteroides eggerthii DSM 20697] gi|317473772|ref|ZP_07933053.1| RmlD substrate binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217987569|gb|EEC53897.1| hypothetical protein BACEGG_01873 [Bacteroides eggerthii DSM 20697] gi|316910029|gb|EFV31702.1| RmlD substrate binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 287 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 159/286 (55%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + ++ ++ + ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRALSAENGQHTYFFTDVQELDICDEQAIRAFVSGNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNPELCDKLNHIAPGYLAAAAEACGAAMIQVSTDYVFDGTGHIPYTEDIAP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +I+RTAW+YSI+G+NF+ +M+RL ER ++ VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVGEKCSRAMIIRTAWLYSIYGNNFVKTMIRLGNEREKLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + G++H + D G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAINQGI------VPGVYHFS-DEGVCSWYDFTVAIHRMA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T I I W+E ++ Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIEIPHWEESLQ 276 >gi|83719857|ref|YP_442018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] gi|167580856|ref|ZP_02373730.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis TXDOH] gi|167618957|ref|ZP_02387588.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis Bt4] gi|257138201|ref|ZP_05586463.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] gi|83653682|gb|ABC37745.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] Length = 298 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 153/289 (52%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R + DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLARDEADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A +N E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAESDGAAAKVVNGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKSSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIF--WESAER 236 PT A IA +A + E + + G++HMT+ G SW FA+ I W + Sbjct: 181 APTWARSIADGTAHALATAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIVASWRAVPG 239 Query: 237 GGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P S++ I T YP A RPA S L L I + W+ V Sbjct: 240 AAPLAVSRIVPIPTSAYPVPARRPANSVLSNEALKERFGIELPDWRYAV 288 >gi|332828457|gb|EGK01162.1| dTDP-4-dehydrorhamnose reductase [Dysgonomonas gadei ATCC BAA-286] Length = 317 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/283 (38%), Positives = 157/283 (55%), Gaps = 9/283 (3%) Query: 4 LVIGNNGQIA---QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G NGQ+ + ++S + + ++D+ + F + I+N AAY Sbjct: 31 LITGANGQLGNEIRRIASFHENNFQFFFTDVAELDITDQQAIEDFIRENNIKYIVNCAAY 90 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ + + IN + + AA + G I+ISTDYV+DG + P E NP Sbjct: 91 TAVDKAEDDVALCYRINRDAVANLGAAATNNGSKIIHISTDYVYDGTASKPYTETDEVNP 150 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YGKSK GE + + +I+RTAW+YSIFG+NF+ +M++ KER ++VV DQ G Sbjct: 151 QSVYGKSKQEGEAALIKACPDSIIIRTAWLYSIFGNNFVKTMMKYGKERDTLNVVADQTG 210 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT+A +A AII+I NS T GI+H + + G +W DF I + G Sbjct: 211 TPTNAGDLANAIIKILDYSEANSFTP--GIYHYSNE-GITTWYDFTLAIHKHA---GIIN 264 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I T QYPTKA RP YS LD +K+ T I I W++ + Sbjct: 265 CTVNPITTDQYPTKATRPKYSVLDKTKIKTTFKITIPEWEKSL 307 >gi|167570966|ref|ZP_02363840.1| dTDP-4-dehydrorhamnose reductase [Burkholderia oklahomensis C6786] Length = 250 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 135/243 (55%), Gaps = 7/243 (2%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P +I+NPAAYTAVDKAE + +A +NAE A+ A G I+ STDYVFDG Sbjct: 8 LEPSIIVNPAAYTAVDKAESDEAMARQLNAEAPRVFAEEAARSGATLIHYSTDYVFDGAK 67 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 +P E NP N+YG++KLAGE+ +A+ ++ILRT+WVY G NFLL+MLRL E Sbjct: 68 ASPYTEDDAVNPQNVYGRTKLAGEQAIAASGCAHLILRTSWVYGQRGKNFLLTMLRLRDE 127 Query: 169 RREISVVCDQFGTPTSALQIARAIIQI-AHNLIENSD---TSLRGIFHMTADGGPVSWAD 224 R E+ VV DQ G PT A IA I A L S GI+H+T G SW Sbjct: 128 RSELRVVADQIGAPTWANTIATMTAHIVAQGLAAGSVQWWAERSGIYHLTC-AGATSWHG 186 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA+ IF ++ P ++ I T YPT A RPA S L KL ++ S W E ++ Sbjct: 187 FAQDIFARASSESSP--RLLPISTSDYPTPAKRPANSRLSNEKLETVFGLKPSRWDEALQ 244 Query: 285 NIL 287 L Sbjct: 245 LCL 247 >gi|241763422|ref|ZP_04761476.1| dTDP-4-dehydrorhamnose reductase [Acidovorax delafieldii 2AN] gi|241367364|gb|EER61685.1| dTDP-4-dehydrorhamnose reductase [Acidovorax delafieldii 2AN] Length = 297 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 164/299 (54%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIA----QSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M L++G GQ+ +SLS + V ++ G D P A + PDVI+ Sbjct: 1 MNILLLGKGGQVGWELQRSLSVLGTVTALDHDSTGHCG-DFANPAGLADTVRALRPDVIV 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+TAVDKAE EPE A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 60 NAAAHTAVDKAESEPEFARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGTRPWVET 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL++YG++KL GE+++ ++ILRT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 120 DTPAPLSVYGRTKLEGEQRIQQSGAKHLILRTSWVYAARGGNFAKTMLRLAQERDRLTVI 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT A +A +L ++ + G++H A GG +W +A+Y+ ++ + Sbjct: 180 DDQWGAPTGADLLADVTAHALRHLQQHPEAG--GLYHCVA-GGETNWHLYAKYVLAQAQQ 236 Query: 236 RGG----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V + T +PT A RP S LD ++L +++ W+ GV +L + Sbjct: 237 AQPAIKIKATEVAPVPTSAFPTPAQRPHNSRLDTTQLQTIFGLQLPHWQTGVERMLQEV 295 >gi|90425661|ref|YP_534031.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB18] gi|90107675|gb|ABD89712.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB18] Length = 291 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 158/289 (54%), Gaps = 5/289 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LVIG +GQ+A +L+ + ++ +G D++ L + + +IN AAY Sbjct: 1 MRILVIGRHGQVATALARLGAGVHDVTCLGHDDVNALVKAELDDAVTRTGAEAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A+++N +A+ + + G+P I++STDYVFDG P P P Sbjct: 61 TAVDKAETDQDAAYALNQRLPRLLAEISAARGVPFIHLSTDYVFDGSKAAPYLPTDPIRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++IYG SK GE V ILRTAWVYS GSNF+ ML L ER E+ +V DQ G Sbjct: 121 VSIYGASKATGEIAVRVANPAAAILRTAWVYSETGSNFVKRMLELGAERDELRIVDDQLG 180 Query: 181 TPTSALQ-IARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A A + AH + S GI+H A G V+W FA+ IF E++ RG Sbjct: 181 NPTFADDLAAACLRLAAHPGLRAG--SAGGIYHY-AGHGDVTWYGFAQAIFAEASRRGRR 237 Query: 240 Y-SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + QYPT A RPA S LDC+ T ++ +W++ ++ L Sbjct: 238 TPQRVLAITSDQYPTPARRPANSRLDCAATEATFSVASQSWRDALKTCL 286 >gi|85543849|gb|ABC71787.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens] Length = 296 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/305 (36%), Positives = 160/305 (52%), Gaps = 27/305 (8%) Query: 1 MKCLVIGNNGQIAQSLSSM-------CV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L C+ +E + ++D L+ + P Sbjct: 1 MKILLLGKNGQVGWELQRSLGDRGDGCLDRHPLEGLSGDLSELDALR-----ATIRKVGP 55 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I+N AAYTAVDKAE E E+A +N E + +A+ A S+ I+ STDYVF G TP Sbjct: 56 DIIVNAAAYTAVDKAESETELADRVNGEASRVMAQEAASLDAWLIHYSTDYVFSGEGSTP 115 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E P+N YG SKLAGE+ +A+ ++I RT+WVY G+NF +MLRLAK+R Sbjct: 116 WQESDAVAPVNHYGASKLAGEQAIAASGCKHLIFRTSWVYGARGNNFAKTMLRLAKDRES 175 Query: 172 ISVVCDQFGTPTSALQIAR----AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + V+ DQ G PT A IA AI Q+ H +L GI+H+ A G VSW +A Sbjct: 176 LGVIADQVGAPTGADLIADVTALAIQQVVHR------PALSGIYHLAA-AGEVSWHGYAS 228 Query: 228 YIFWESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + + G + + I T YPT A RP S L+ KL + ++ + W+ GV Sbjct: 229 LVISFAKAHGEELAVTAINPIDTTAYPTPARRPLNSRLNTQKLCDNFSLHLPDWQSGVTR 288 Query: 286 ILVNI 290 +L + Sbjct: 289 MLREV 293 >gi|228964269|ref|ZP_04125388.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795366|gb|EEM42854.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar sotto str. T04001] Length = 284 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYTNMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|150019561|ref|YP_001311815.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] gi|149906026|gb|ABR36859.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] Length = 279 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 152/288 (52%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ + + +++E + + R ++D+ PD +I+ AAYTA Sbjct: 3 LVTGVNGQLGYDVVKELNRRNIECLGIDRAELDITDKNAVKDCIGKLKPDCVIHCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AEDE E+ +N G IAKA IG IYISTDYVFDG TP + P + Sbjct: 63 VDRAEDEEEVCAKVNVYGTDNIAKACKEIGAKMIYISTDYVFDGKGNTPFEVEDKIEPHS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK+K GE KV + Y I+R +WV+ + G+NF+ +MLRL E+ ++VVCDQ G+P Sbjct: 123 VYGKTKYEGELKVKEVLDKYFIVRISWVFGVNGNNFIKTMLRLGSEKESLNVVCDQIGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A + +A + G++H T +G SWA+FA I ++ G K Sbjct: 183 TYTADLAPLLCDMAV-------SEKYGVYHATNEGF-CSWAEFAGEIM----KKAGLSCK 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +YP KA RP S L L + + W+ + L+ + Sbjct: 231 VNPIPTSEYPAKAQRPFNSRLSKKSLVDNGFGLLPNWENALDRYLIEL 278 >gi|241668048|ref|ZP_04755626.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876583|ref|ZP_05249293.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842604|gb|EET21018.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 301 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 112/301 (37%), Positives = 163/301 (54%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV G+NGQ+ L S + +Q+ I + +D+ + F + + I Sbjct: 1 MKVLVTGSNGQLGSELKELVSNSKLEIQNYTFIFMDSKSLDITDHQAVERFVVEHDIEAI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVDKAE + E+A IN IA+ A I I+ISTDYVF+G S P E Sbjct: 61 INCAAYTAVDKAESDIEMADKINHLAVATIAELAKKCSIKLIHISTDYVFNGESFRPYIE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 TNP +IYG +KLAGEE + + +I+RT+WVYS +G+NF+ +MLRL +E+ + Sbjct: 121 SDKTNPQSIYGATKLAGEEVIQRINPKDSIIIRTSWVYSSYGNNFVKTMLRLGREKDTLG 180 Query: 174 VVCDQFGTPTSALQIARAII----QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 V+ DQ GTPT A +A+AI+ Q+ + +D + I++ + + G SW DFA+ I Sbjct: 181 VIYDQVGTPTYAKDLAKAILDILSQVDSRVKHENDNEVVEIYNYSNE-GVTSWYDFAKEI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T YPT A RP YS L+ K+ + I WK +++ + Sbjct: 240 M----SIAKIECQVNPIETVDYPTPAKRPHYSLLNKKKIKQDFGLSIPYWKNSLQDCIYR 295 Query: 290 I 290 I Sbjct: 296 I 296 >gi|288942438|ref|YP_003444678.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180] gi|288897810|gb|ADC63646.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180] Length = 302 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG-----RPDIDLLKPKDFASFFLSFSPDVIIN 56 K L+IG NGQ+ L E+I P IDL+ K A PD +IN Sbjct: 12 KLLLIGANGQVGWELRRTLAGVGEVIAASLEGEYGPTIDLMDAKALARLIEDSRPDALIN 71 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEF 115 AAYTAVDKAE + A +NA+ G + G P I+ STD+VF G L RT ++ Sbjct: 72 AAAYTAVDKAESDRATAQRLNADAVGEMGALLAERGTPIIHYSTDFVFSGSLGRTYTEDD 131 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 SP +PLN+YG++KL GE + +I RT+WVY G+NFLL+M RL +ER E+ VV Sbjct: 132 SP-DPLNVYGETKLGGERALLDSGARALIFRTSWVYGARGANFLLTMRRLFQEREELRVV 190 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWE 232 DQ G+PT + +A Q+ H ++ D L G++H+T G VSW FA I Sbjct: 191 DDQIGSPTWSRMLAEITAQVLHRVLRG-DLDLDKVGGLYHLTGS-GQVSWYGFASAIL-- 246 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 E G + + I + +Y A RP +S LD + T + + W+ Sbjct: 247 --EASGAQTNLIPIPSSEYQAPAKRPTFSVLDNGRFQETFGLAMPDWR 292 >gi|21673146|ref|NP_661211.1| dTDP-4-dehydrorhamnose reductase [Chlorobium tepidum TLS] gi|21646223|gb|AAM71553.1| dTDP-4-dehydrorhamnose reductase [Chlorobium tepidum TLS] Length = 292 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 159/296 (53%), Gaps = 17/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV----EIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M LV G+ GQ+ L + Q+V E + P++D+ I+N Sbjct: 1 MNILVTGSRGQLGSELQKL--QEVHGWQEWFFMDLPELDITDALAVERVCRDRRIGAIVN 58 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE + E AF +N +GA +A A +G +++STDYVFDG S P E Sbjct: 59 CAAYTAVDRAESDAEAAFRVNRDGAAVLAAVAMEVGALLLHVSTDYVFDGSSNRPYCEDD 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P +YG SK GEE + + +Y+ILRTAW+YS++G NF+ +MLRL ER+ + VV Sbjct: 119 PVAPCGVYGLSKWEGEEAIRASGCSYIILRTAWLYSVYGQNFVKTMLRLGSERQSLGVVF 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G+PT A +A I+ I ++ D S FH + + G SW DFA+ I A Sbjct: 179 DQVGSPTWAADLAGTIVSI----LDQCDPVRSYSETFHYSNE-GVCSWYDFAKSIM--DA 231 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E G KV I + YPT A RP +S L+ K+ +T + I W + + +L + Sbjct: 232 E--GLSCKVLPIESSNYPTPARRPHFSVLNKRKIKSTLGLEIPYWHDSLLRMLTEL 285 >gi|293611244|ref|ZP_06693542.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826495|gb|EFF84862.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 297 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 110/298 (36%), Positives = 158/298 (53%), Gaps = 12/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L +II + R + D+ + + L+ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGDIIALDRHGLNGLSGDMTQLQAIYDTILAVQPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE + E A +N + A A+A ++ STDYVF+G+ T E Sbjct: 61 NASAYTAVDLAETQQEQADIVNHQTVKAAAEACLKTNALLVHYSTDYVFEGMGTTAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLNIYGK+K GE+ + Y+I RT+WVY+ NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNIYGKTKALGEQAIVDSGCRYLIFRTSWVYASRAKNFLKTMLSLAQQREELSII 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G PTSA IA AH + + D + GI+H+ A G SW +A Y F ++ Sbjct: 181 DDQIGAPTSAELIADI---TAHAIPQTVVDANKVGIYHLVAS-GETSWFGYANYAFAQAR 236 Query: 235 ERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + KV I T YPT A RP S LD K+ T + + W+EGV+ L + Sbjct: 237 ILGQELTIQKVSPIPTSAYPTPATRPHNSRLDNQKIQRTFGLTLPVWQEGVKRALTEL 294 >gi|228994851|ref|ZP_04154648.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM 12442] gi|228764898|gb|EEM13655.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM 12442] Length = 280 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 162/291 (55%), Gaps = 17/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + R ++D+ S PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFIAYFTEKGDTLYSFTRKELDVTDATSLNPIMKSLKPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE+ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEENWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMHARDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V ++ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVRNFHSRYFIMRTSWLYGGEGPNFVRTMQTLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ +I+ T+ G +H+ ++ G SW +FA IF E Sbjct: 181 GCPT----YTKDLVCKTGEMIQ---TNQYGTYHV-SNRGECSWFEFATRIFQEMRVN--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLD--CSKLANTHNIRISTWKEGVRNILV 288 KV + T++Y KA RP YS L C +L ++R W+E +R ++ Sbjct: 230 -VKVIPVKTEEYRAKAERPRYSVLQHLCLELNGFTSMR--QWEEALREYII 277 >gi|47568424|ref|ZP_00239125.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241] gi|47554972|gb|EAL13322.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241] Length = 284 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 159/288 (55%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|167770811|ref|ZP_02442864.1| hypothetical protein ANACOL_02162 [Anaerotruncus colihominis DSM 17241] gi|167666851|gb|EDS10981.1| hypothetical protein ANACOL_02162 [Anaerotruncus colihominis DSM 17241] Length = 283 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 108/291 (37%), Positives = 156/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G +GQ+ + + + +E V D+D+ K + + PD +I+ AA Sbjct: 1 MRVFVTGASGQLGYDVCKELTRRGIENRGVSVEDLDITDRKAVEAALENNRPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E +++N +G +A + +IG +YISTDYVF GL + + N Sbjct: 61 YTAVDKAEDEAEQCWAVNVDGTRNLAVSCKAIGAKMLYISTDYVFPGLGKQFYEVTDAVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGE V S +Y I+R +WV+ G+NF+ +MLRL+K E++VVCDQ Sbjct: 121 PTNVYGASKLAGELVVQSLLTDYFIVRISWVFGANGNNFIKTMLRLSKSNTELNVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + T G++H T + G SWA+FAE IF G Sbjct: 181 GSPTYTADLAPLLCDMIR-------TDQFGLYHATNE-GVCSWAEFAEEIF----RCAGK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT A RP S L L+ + W +R L+ I Sbjct: 229 EVKVNHILTEEYPTCAKRPLNSRLSKRMLSAQGFRPLPEWTNALRRYLIEI 279 >gi|228951700|ref|ZP_04113802.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807985|gb|EEM54502.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 284 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERNEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|168212615|ref|ZP_02638240.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str. F4969] gi|170715772|gb|EDT27954.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str. F4969] Length = 295 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 158/302 (52%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENTKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E AE V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM-ELAENK---CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|30261326|ref|NP_843703.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Ames] gi|47526496|ref|YP_017845.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184158|ref|YP_027410.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Sterne] gi|65318594|ref|ZP_00391553.1| COG1091: dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A2012] gi|165872857|ref|ZP_02217483.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0488] gi|167636153|ref|ZP_02394458.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0442] gi|167641233|ref|ZP_02399487.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0193] gi|170686734|ref|ZP_02877954.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0465] gi|170708895|ref|ZP_02899329.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0389] gi|177654464|ref|ZP_02936361.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0174] gi|190569153|ref|ZP_03022051.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis Tsiankovskii-I] gi|196036252|ref|ZP_03103651.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus W] gi|196044318|ref|ZP_03111554.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB108] gi|227815933|ref|YP_002815942.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CDC 684] gi|228913893|ref|ZP_04077518.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228944928|ref|ZP_04107289.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229601322|ref|YP_002865747.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0248] gi|254682613|ref|ZP_05146474.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CNEVA-9066] gi|254725410|ref|ZP_05187192.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A1055] gi|254734030|ref|ZP_05191744.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Western North America USA6153] gi|254740823|ref|ZP_05198512.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Kruger B] gi|254753666|ref|ZP_05205702.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Vollum] gi|254758763|ref|ZP_05210790.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Australia 94] gi|30255180|gb|AAP25189.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Ames] gi|47501644|gb|AAT30320.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178085|gb|AAT53461.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Sterne] gi|164711434|gb|EDR16985.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0488] gi|167510874|gb|EDR86266.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0193] gi|167528507|gb|EDR91272.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0442] gi|170126211|gb|EDS95104.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0389] gi|170669257|gb|EDT20000.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0465] gi|172080748|gb|EDT65830.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0174] gi|190559736|gb|EDV13723.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis Tsiankovskii-I] gi|195991227|gb|EDX55196.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus W] gi|196024957|gb|EDX63628.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB108] gi|227004044|gb|ACP13787.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CDC 684] gi|228814597|gb|EEM60857.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228845832|gb|EEM90858.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265730|gb|ACQ47367.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0248] Length = 284 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|315640671|ref|ZP_07895775.1| dTDP-4-dehydrorhamnose reductase [Enterococcus italicus DSM 15952] gi|315483567|gb|EFU74059.1| dTDP-4-dehydrorhamnose reductase [Enterococcus italicus DSM 15952] Length = 281 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q + ++D+ + + P VI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEQGHAYLSTDSHEMDITDAEATMAKIKEIQPKVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 VDKAEDE E+ +N +G +AKAA+++G +YISTDYVFDG L +PTNP Sbjct: 63 VDKAEDEGKELDELVNVKGTENVAKAAEAVGATLVYISTDYVFDGTLKDGEYATDAPTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KLAGEE V Y + Y I+RT+WV+ +G NF+ +M +LA+ ++VV DQ+G Sbjct: 123 LNEYGRTKLAGEEAVQKYMSKYYIIRTSWVFGKYGHNFVFTMQKLAQTHPTLTVVNDQYG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + I GI+H++ D +W +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMTFATEKKIP------YGIYHLSNDHA-CTWYEFAKEILKDTDVDVQP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + Q+P KAHRP YS +D SK A I TW+E ++ +L ++ Sbjct: 235 -----VTSDQFPQKAHRPQYSVMDLSK-AKATGFTIPTWEEALKMMLESV 278 >gi|120437610|ref|YP_863296.1| dTDP-4-dehydrorhamnose reductase [Gramella forsetii KT0803] gi|117579760|emb|CAL68229.1| dTDP-4-dehydrorhamnose reductase [Gramella forsetii KT0803] Length = 282 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 149/286 (52%), Gaps = 13/286 (4%) Query: 4 LVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ Q + + ++D+ FF D IN AAYT Sbjct: 5 LVTGANGQLGQCFQKQTQNFSNFKFFFCSSGELDITSKDALEQFFQKHQIDFCINTAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V++AE+E E AFS+NAEG IA+ G + STDYVF+G S+ P E +P+ Sbjct: 65 NVEQAENEEEKAFSVNAEGTKNIAEICKKHGAVLFHFSTDYVFNGQSQKPYKEIDEVDPI 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKL GEE++ S Y ILRT+W+YS FG NF ++LR +E+ E+++ Q GT Sbjct: 125 NVYGASKLKGEEEIQSTMEQYFILRTSWLYSEFGHNFFRTILRKVEEKAELNITTSQIGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+A +A+ ++++ +S++ G++H + + G +W DFA I G Sbjct: 185 PTNANDLAKFVLKMI-----SSESQDFGLYHFSNE-GQATWYDFAAEIL----NYSGKMD 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V T + T A RP YS L K I WKE + N++ Sbjct: 235 QVQLNKTGFFKTLAERPEYSVLSKEKFTEQFG-PIDNWKESLFNLI 279 >gi|311109416|ref|YP_003982269.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans A8] gi|310764105|gb|ADP19554.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans A8] Length = 299 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/292 (37%), Positives = 160/292 (54%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ + L + EI+ +GR DL + S PDVI+N AAY Sbjct: 1 MKILLLGKDGQVGRELCHALLPFGEIVALGRDGADLRDQDALLAVLSSCRPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE++ E A +NA +A+ A + ++ STDYVFDG + P E NP Sbjct: 61 TAVDAAENDRETATRVNALAVATLARHAQAARALLVHFSTDYVFDGAQQRPYSETDGPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +KLAGE + + + ++ R WVYS G NFL +MLRLA ER+ ++VV DQ G Sbjct: 121 LNVYGSTKLAGERAIQATGCDALVFRIGWVYSRHGKNFLNTMLRLALERQSLNVVSDQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA +A A + ++ L G +H+ A G +W +A YI +A RG Sbjct: 181 APTSATFVADV---TALAIRQHCAGRLPAGTYHLAA-AGSTNWHAYARYIVAGAAARGAS 236 Query: 240 Y----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ I + YP A RP+ S LD +KL++ +R+ +W E V L Sbjct: 237 LMLAPEQIHAIAARDYPGAAQRPSNSTLDTAKLSHALQLRMPSWTEQVDRTL 288 >gi|329956905|ref|ZP_08297473.1| dTDP-4-dehydrorhamnose reductase [Bacteroides clarus YIT 12056] gi|328523662|gb|EGF50754.1| dTDP-4-dehydrorhamnose reductase [Bacteroides clarus YIT 12056] Length = 286 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/286 (38%), Positives = 159/286 (55%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + ++ ++ + ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRALSAENQQHTYFFTDVQELDICDEQAIRTFVAGNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNPELCDKLNHVAPGYLAAAAEACGAAMIQVSTDYVFDGTGHIPYTEEVTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YS++G+NF+ +M+RL ER ++ VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMEKCSRAMVIRTAWLYSVYGNNFVKTMIRLGNEREKLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAINRGI------VPGIYHFS-DEGVCSWYDFTVAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T I I W+E ++ Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIGIPHWEESLQ 276 >gi|187927733|ref|YP_001898220.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J] gi|187724623|gb|ACD25788.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J] Length = 306 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 150/292 (51%), Gaps = 10/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + +V G GQ+ L EII V R +DL + + S P +I+N AAYT Sbjct: 8 RIVVTGTTGQVGWELLRSLQGLGEIISVDRSVVDLSRLDAVRALIRSIEPSIIVNAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP+ AF +NA+ G +A+ I+ STDYVFDG P E TNPL Sbjct: 68 AVDKAEQEPDPAFRLNADLPGVLAEECKRTQAAFIHYSTDYVFDGRKDGPYTEADATNPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKLAGE ++ RT+WVY G NFL ++ RLAKER+++ VV DQ G Sbjct: 128 NVYGASKLAGEHNALDANPATLVFRTSWVYGARGKNFLTTIQRLAKERQQLRVVSDQIGA 187 Query: 182 PTSALQIARAIIQIAHNLIENSD------TSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 PT + IA + + ++ T G++H+T++G SW FAE I S Sbjct: 188 PTWSRSIADLTAHVIARGLGSTHAEPAWWTVHGGVYHLTSNGS-TSWYGFAEAILQRSGI 246 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I +YPT A RP S L +KL + + +W++ + L Sbjct: 247 TG---VAVEPIPAMEYPTPAVRPGNSRLALNKLQSVFGLVPESWEQSLTKCL 295 >gi|330988616|gb|EGH86719.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 301 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + DL + + P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVVGEVIALDRHTVSTAYGDLSGDLSNLEGLRNSIRRIQP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 61 QVIVNAAAYTAVDKAETERELAHTVNALASQVMAEEAQTLDALLVHYSTDYVFDGSGNTA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDAVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 296 >gi|13518096|gb|AAK27394.1| putative dTDP-4-keto-L-rhamnose reductase [Burkholderia mallei] Length = 298 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 117/297 (39%), Positives = 154/297 (51%), Gaps = 21/297 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR---------GIFHMTADGGPVSWADFAEYIF- 230 PT A IA AH L T++R G++HMT+ G SW FA+ I Sbjct: 181 APTWARSIADG---TAHALT----TAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIA 232 Query: 231 -WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 W +A P S++ I YP A RPA S L L I + W+ +R Sbjct: 233 SWRAAPGAAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYALR 289 >gi|229090266|ref|ZP_04221511.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-42] gi|228693046|gb|EEL46762.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-42] Length = 284 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKCAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|254284101|ref|ZP_04959069.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR51-B] gi|219680304|gb|EED36653.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR51-B] Length = 301 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 11/290 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G NGQ+ L D E+I R D+D+ F + +IN +AYTAV Sbjct: 8 LLLGANGQLGSELQFTKPGDTELIACARTDLDIADTDALQRAFTRYRFQSVINASAYTAV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE E E A ++N +G +A + G+ ++ISTD++FDG+ +P NPL Sbjct: 68 DAAETEREAAHAVNTKGPARLADLCAAHGVRLLHISTDFIFDGMKGSPYRIDDTPNPLGH 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KLAGE V + +++RT WVYS GSNF+ +MLRL ER +SVV DQ GTPT Sbjct: 128 YGVTKLAGERAVLGSGADALVVRTGWVYSAQGSNFVRTMLRLMAERDRLSVVEDQVGTPT 187 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR + + L+ +D G +H + D G SW DFA I + A R G + Sbjct: 188 ----WARGLANVCWTLL--ADPGAYGCYHWS-DAGACSWYDFAVAIA-DEASRIGLLDRA 239 Query: 243 --VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YPT A RPAYS LD + N W+E +R++L+ + Sbjct: 240 PAIVPIPSSDYPTPARRPAYSVLDKTGTRERLNYPGVHWREALRSMLLEV 289 >gi|206900293|ref|YP_002250033.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] gi|206739396|gb|ACI18454.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] Length = 292 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 149/264 (56%), Gaps = 11/264 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G GQ+ + EI ++D+L PDV+IN +AY Sbjct: 5 MKIVILGGKGQLGTEIYEYLKDKEEIYSFSHQELDILNYDLLEKKLQEIKPDVVINCSAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE+E + +N GA ++ A +G +Y STDY+FDG TP EF NP Sbjct: 65 TKVDKAEEEKDECIKVNTIGAKYVSFLAYKVGAKIVYFSTDYIFDGEKSTPYTEFDDPNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKL GE+ + N++ILR +W+Y I+G NF+ ++L LA+ER+++++V DQ G Sbjct: 125 LSVYGLSKLYGEKLTIEHNPNHLILRISWLYGIYGRNFVKTILNLARERKKLTIVNDQKG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT L +A+ + + LI+ GI+H +++ G +W DFA+ I + Sbjct: 185 SPTYTLDVAKQV----YELIKKDKV---GIYH-SSNQGETTWYDFAKRIIEILKIKD--- 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLD 264 +V I T++YP+ A RP YS LD Sbjct: 234 VEVLPIKTEEYPSIAKRPKYSVLD 257 >gi|168211916|ref|ZP_02637541.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens B str. ATCC 3626] gi|170710142|gb|EDT22324.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens B str. ATCC 3626] Length = 294 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 107/302 (35%), Positives = 156/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ +++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + I + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIVAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM----ELAGNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|198277052|ref|ZP_03209583.1| hypothetical protein BACPLE_03260 [Bacteroides plebeius DSM 17135] gi|198269550|gb|EDY93820.1| hypothetical protein BACPLE_03260 [Bacteroides plebeius DSM 17135] Length = 285 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 155/284 (54%), Gaps = 12/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + + + + E ++D+ + F + DVI+N AA Sbjct: 3 KILVTGANGQLGNEMRLLAEKHRNFEYFFTDVAELDICDEQAVMEFVSAHQIDVIVNCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED E+ +N G +AKAA S + +STDYVFDG + P E Sbjct: 63 YTAVDKAEDNVELCDKLNHVAPGYLAKAAQSRNGWLVQVSTDYVFDGTAHVPYKEEDTPC 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KLAGE++ N +++RTAW+YS FG+NF+ +M+RL +E+ + V+ DQ Sbjct: 123 PNSVYGSTKLAGEQEALKQCPNTMVIRTAWLYSTFGNNFVKTMIRLGQEKETLGVIFDQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A+AI I + GI+H + + G SW DF + I + G Sbjct: 183 GTPTYARDLAQAIFVALEKGI------VPGIYHFSNE-GVCSWYDFTKAIHRLA---GIT 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V + T+ YPTKA RP YS LD +KL T+ + + W + + Sbjct: 233 TCHVSPLHTEDYPTKACRPHYSVLDKTKLKKTYGVEVPYWMDSL 276 >gi|229177736|ref|ZP_04305110.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 172560W] gi|228605700|gb|EEK63147.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 172560W] Length = 284 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKGLHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NSGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|171057311|ref|YP_001789660.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6] gi|170774756|gb|ACB32895.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6] Length = 296 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/297 (36%), Positives = 157/297 (52%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L E+I + R D L +P A+ + P VI+N Sbjct: 1 MKILLLGKNGQLGWELQRALAPLGELIALDRHATDFAADLAQPDSLAATVRALQPQVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EPE+A ++NA G +A+AA G ++ STDYVFDG E + Sbjct: 61 AAAYTAVDKAESEPELARTVNATSPGVLAQAAAEAGAWLLHYSTDYVFDGSGTAARSEDA 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE + + ++ILRT+WVY+ G NF +MLRLA ER ++V+ Sbjct: 121 ATAPLNVYGQTKLEGEAAIRASGCRHLILRTSWVYAARGGNFAKTMLRLAGERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + ++ + + G +H A GG SW +A ++ E A Sbjct: 181 DQIGAPTGADLLADLSAHMLRQALQQPECA--GTYHAVA-GGETSWHAYARHVI-EWARA 236 Query: 237 GGPYSKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G K I + + T A RP S L ++L + + W+ GV +L + Sbjct: 237 HGHELKATDIAAVPSSAFATAAQRPLNSRLSTARLQQVFGLHLPHWQTGVDRMLAEV 293 >gi|301299656|ref|ZP_07205913.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852750|gb|EFK80377.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 279 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 21/294 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKVLITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF--S 116 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG +RT + Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDG-NRTSGEYLPDD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +M+ LAK +++VV Sbjct: 120 PKGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMINLAKNHDKLTVVD 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT +A + + N +E G++H D G SW +FA+ I ++ Sbjct: 180 DQVGRPTWTRTLAEFLTYLVDNKVE------YGVYHCCND-GQCSWYEFAKEILKDTNVD 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + QYPT A RP YS + KLA WKE + L + Sbjct: 233 VQP------VTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|229108781|ref|ZP_04238388.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15] gi|229149526|ref|ZP_04277758.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550] gi|228633872|gb|EEK90469.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550] gi|228674672|gb|EEL29909.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15] Length = 284 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VHVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|221214409|ref|ZP_03587380.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221165666|gb|EED98141.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 303 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 148/288 (51%), Gaps = 14/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTAV Sbjct: 10 LLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + +A +NAE +A+ A IG I+ STDYVF G P E P +P N+ Sbjct: 70 DQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKEGPYVEDDPVDPQNV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E++VV DQ G PT Sbjct: 130 YGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELNVVADQIGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSLR--------GIFHMTADGGPVSWADFAEYIFWESAE 235 + IA AH + + +R GI+H+ A G SW FAE IF + Sbjct: 190 WSNTIA---TLTAHVVAQAISAPMRDEWWHAHSGIYHLCA-AGSTSWHGFAEAIFRLADL 245 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P V I YPT A RPA S + +KLA + W+ + Sbjct: 246 PKKP--AVMPIPASAYPTPAKRPANSQMSNAKLAEHFGLHAPHWEAAL 291 >gi|52840994|ref|YP_094793.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296784|ref|YP_123153.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Paris] gi|6688598|emb|CAB65207.1| RmlD protein [Legionella pneumophila] gi|52628105|gb|AAU26846.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750569|emb|CAH11971.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Paris] Length = 294 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 157/290 (54%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + +P I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCTLKNVPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PTSA IAR + +I I +S G++H A G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHY-AGQGVTNWHEFANVFLNMAKEKQLL 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ Sbjct: 239 LTLTDLNPIKSQEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVI 288 >gi|30019368|ref|NP_830999.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579] gi|229126629|ref|ZP_04255641.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4] gi|229143930|ref|ZP_04272347.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24] gi|29894911|gb|AAP08200.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579] gi|228639493|gb|EEK95906.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24] gi|228656569|gb|EEL12395.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4] Length = 284 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|229132120|ref|ZP_04260979.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196] gi|228651340|gb|EEL07316.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196] Length = 284 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS L +++STW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAVRPKYSIFQHKMLQLNGFLQMSTWEEGLERFFI 279 >gi|296501911|ref|YP_003663611.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] gi|296322963|gb|ADH05891.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] Length = 284 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAATRPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|124025563|ref|YP_001014679.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL1A] gi|123960631|gb|ABM75414.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL1A] Length = 297 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 106/296 (35%), Positives = 153/296 (51%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ Q++ VE+I R ++DL + PD +IN AY Sbjct: 1 MKVLLTGASGQLGQAIIKSKPSFVELIATTRRELDLADDEACRRAVRQHQPDWVINSGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDE E+A SIN A+ G + +STD+VFDG P P Sbjct: 61 TAVDKAEDEKELAMSINTIAPKMFAEELSQTGGKLLQLSTDFVFDGEQNFPYKTGQKKKP 120 Query: 121 LNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG +K AGE+ V +N +I+RT+W++ G NF+ +M+RL + + EI VV D Sbjct: 121 LGVYGATKAAGEDAIYDVLGNSNQALIIRTSWLFGAVGKNFMKTMIRLHRSQEEIRVVSD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A + + L H +D G SW +FA+ I E R Sbjct: 181 QIGCPTSTLTLAKACWRAIEKQKDIEPNVLSPQLHHWSDEGSASWYEFAKVIG-ELGCRI 239 Query: 238 GPY---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +KV I +++Y T+A RP YS LDC+ N+ WKE + N++ + Sbjct: 240 GLIERPAKVIPISSEEYTTRAKRPKYSILDCTTTRQFLNLEGIHWKESILNVMKQV 295 >gi|89899525|ref|YP_521996.1| dTDP-4-dehydrorhamnose reductase [Rhodoferax ferrireducens T118] gi|89344262|gb|ABD68465.1| dTDP-4-dehydrorhamnose reductase [Rhodoferax ferrireducens T118] Length = 300 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 116/303 (38%), Positives = 155/303 (51%), Gaps = 20/303 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-----RPDI---DLLKPKDFASFFLSFSPD 52 MK L+ G GQ+ L E++ +G PD D A PD Sbjct: 1 MKILLFGRGGQVGWELQRSLSVLGELVALGSDASHNPDGLCGDFSHLPGLAETIRRVKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EPE A ++NA G +A A +G ++ STDYVFDG + Sbjct: 61 VIVNAAAHTAVDKAEAEPERARALNALAPGVLAAEAQKLGAWLLHYSTDYVFDGSGQQAW 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YGK+KL GE V S ++I RT+WVY+ G NF +MLRLA ER + Sbjct: 121 REGDATGPLSVYGKTKLEGEHLV-SACAKHLIFRTSWVYAARGGNFAKTMLRLAGERDTL 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFW 231 +V+ DQ G PTSA +A AH L + L G++H A GG SW +A Y+ Sbjct: 180 TVIDDQIGAPTSAELLADV---TAHALAKAMRAPELAGLYHCVA-GGETSWYGYARYVLG 235 Query: 232 ESAERG-----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 ++ G GP +V T YPT A RP S LD KL + + W++GV + Sbjct: 236 QAQALGCQLKAGP-DQVLPTATASYPTPARRPLNSRLDTLKLQAAFGLVLPPWQQGVARM 294 Query: 287 LVN 289 L Sbjct: 295 LAE 297 >gi|170720582|ref|YP_001748270.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169758585|gb|ACA71901.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 301 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R DL + + S +P Sbjct: 1 MKILLLGKNGQVGWELQRALSVLGEVVALDRHRASTPYGELAGDLSDLEGLRATIRSVAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A + ++ STDYVFDG P Sbjct: 61 QVIVNAAAYTAVDKAESERELAHTVNALASQVMAEEAKRLDAWLVHYSTDYVFDGSGSAP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E P P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKETDPVAPVNYYGATKLEGEQLIQASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRAT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A + + + L GI+H+ A G +W +A + Sbjct: 181 LNVIADQVGVPTGADLLADVAVAALQQALHKPE--LAGIYHL-APAGETTWHAYASDVIA 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + ++G + + I T +YPT A RP S L +KL N+ ++ + W+ GV +L+ Sbjct: 238 FARDQGETLAVEAINPIATTEYPTPAKRPLNSRLSTAKLRNSFSLHLPDWQSGVTRMLM 296 >gi|329119276|ref|ZP_08247963.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] gi|327464623|gb|EGF10921.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] Length = 289 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 117/291 (40%), Positives = 166/291 (57%), Gaps = 11/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G NGQ+ + L + I+ GR +D+ P +F P VIIN AAY Sbjct: 1 MNILITGANGQVGRELVARLQDRATILAAGRDTLDITDPAAVERTAAAFRPHVIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A+++N + +A+AA +++STDYVFDG P E P P Sbjct: 61 TAVDKAESDAATAYAVNRDAVRHLARAAAEHNAALLHLSTDYVFDGTLNRPYRETDPATP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYG+SKLAGE+ A+ ++ILRTAWV+ G NF+ +MLRLA+ER + +V DQ+G Sbjct: 121 QSIYGQSKLAGEQAAAA-CPRHIILRTAWVFGAHGRNFVKTMLRLARERDSLGIVADQYG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER--- 236 PT+A IA A+I IA + T GI+H + G P +SW FA+ IF +A + Sbjct: 180 APTAAADIAAALITIAERTQFHRFTDW-GIYHFS--GNPYLSWYGFAKTIFQAAAAQNLL 236 Query: 237 -GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P K + T+ YPT A RPA S LDC+K+ +T I S W+ + ++ Sbjct: 237 PAAPQLKA--LATEDYPTPARRPANSRLDCTKIRDTFGIAPSDWQAALADL 285 >gi|229189410|ref|ZP_04316427.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876] gi|228594001|gb|EEK51803.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876] Length = 284 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NSGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|42780412|ref|NP_977659.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10987] gi|42736331|gb|AAS40267.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10987] Length = 284 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHIS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|298485663|ref|ZP_07003742.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159689|gb|EFI00731.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 301 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGELCGDLSDLESLRNTIRSVKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 61 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDVVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 296 >gi|332878816|ref|ZP_08446531.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683167|gb|EGJ56049.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 279 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 102/286 (35%), Positives = 153/286 (53%), Gaps = 9/286 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G NGQ+ + + + +D+ + + SF +I+N AAY Sbjct: 1 MHVLVTGANGQLGSEIKANADRKARYFFTDADVLDITQIDEIRSFVHQNHIGLIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A SIN +A + IP I+ISTDYVF G TP E T P Sbjct: 61 TNVDKAEDDTAVAESINHTAVAHLATVCAEVSIPLIHISTDYVFGGNGNTPYTEADNTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL++ER E+ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQQAGIEHLIIRTAWLYSLQFGHNFVKTIQRLSRERNELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A +A ++ + N + R ++H + + G SW DFA E + G Sbjct: 181 GSPTNAADLAAFVVYVIENALYKGK---REVYHFSNE-GVCSWYDFAT----EIVAQAGN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 KV + ++P+K RP YS LD +KL + W+E + N Sbjct: 233 ACKVLPCRSSEFPSKVTRPPYSVLDKAKLKTDFAYEVRHWREALIN 278 >gi|282877500|ref|ZP_06286319.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccalis ATCC 35310] gi|281300386|gb|EFA92736.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccalis ATCC 35310] Length = 282 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 154/289 (53%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + + ++D+ F D I+N A Sbjct: 1 MNILITGCNGQLGNEMQVLQKDYSEHHWFNTDVNELDITDSDAINRFVEEHEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE +A ++NAE +A A + ISTDYVFDG TP E Sbjct: 61 AYTAVDKAESNKRLATALNAEAPTYLAVAMAKRDGWMVQISTDYVFDGTQHTPYIETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE VA +VI+RTAW+YS FG+NF+ +MLRL +E++++ V+ DQ Sbjct: 121 CPNSVYGATKLAGEVAVAKTCPKHVIIRTAWLYSTFGNNFVKTMLRLGQEKQQLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I + I + GI+H + + G SW DF + I + G Sbjct: 181 IGTPTYAHDLALAIMTIINKGI------VPGIYHFSNE-GVTSWYDFTKAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T +YPT AHRPAYS LD +K+ T I I W+E + + Sbjct: 231 TTCHVKPLHTAEYPTPAHRPAYSVLDKTKIKETFGIEIPHWEESLTKCM 279 >gi|225016239|ref|ZP_03705431.1| hypothetical protein CLOSTMETH_00142 [Clostridium methylpentosum DSM 5476] gi|224950997|gb|EEG32206.1| hypothetical protein CLOSTMETH_00142 [Clostridium methylpentosum DSM 5476] Length = 296 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV----------QDVEIIRVGRPDIDLLKPKDFA---SFFL 47 MK L+ G+ GQ+ LS + ++V+ +V D+D L D A +F Sbjct: 1 MKLLITGSKGQLGNELSKILASGESELGRLPEEVQGCKVTAVDVDELDITDMAAVDTFLQ 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T V+ E ++A +NA GA +A+ + IG +++STDYVF G Sbjct: 61 KERPDVLINCAAMTNVNGCESSQDVAMKVNAIGARNLARGCEQIGCKLVHVSTDYVFSGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP ++YG SKL GE+ V + Y I+RTAW+Y G NF+ ++ +LA+ Sbjct: 121 GDRPYVEWDVCNPQSVYGTSKLLGEQYVRDFCTRYFIVRTAWLYGYVGGNFVKTISKLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER E+ VV DQ G PT+A+ +A ++++A T G++H T G SW DFA Sbjct: 181 ERGEVKVVSDQRGNPTNAVDLAYHLVRLAV-------TEEYGVYHCTGT-GECSWYDFA- 231 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E G +KV T++YPT A RP+YS LD L T + WK+ ++ Sbjct: 232 ---CEIIRLFGIDAKVNPCTTEEYPTPAKRPSYSSLDNMMLRCTIGDEMRDWKDALK 285 >gi|88705329|ref|ZP_01103040.1| dTDP-4-dehydrorhamnose reductase [Congregibacter litoralis KT71] gi|88700419|gb|EAQ97527.1| dTDP-4-dehydrorhamnose reductase [Congregibacter litoralis KT71] Length = 297 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ +L++ + + +GR D D+ P + + P ++IN AAYT Sbjct: 8 RVLVTGGGGQLGSALAATVPPSISLRALGRADCDISNPAAVDAALDAEEPQLLINAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE++ + AF+ N E G + +A GI I++STD+VFDG +P +PT PL Sbjct: 68 AVDRAEEDADAAFAANGEAPGVLGEACARRGIRLIHVSTDFVFDGTRSSPYPVDAPTAPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AGE V + +++RT WVYS G NFL +MLRL EISVV DQ GT Sbjct: 128 GVYGRSKEAGERAVLDSGADALLVRTGWVYSHSGQNFLRTMLRLHGSHEEISVVSDQVGT 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GP 239 PT A +A A+ + +L GI+H + D G SW DFA+ I E+ G Sbjct: 188 PTDAYSLAYALWAA------AARPALGGIYHWS-DAGVCSWYDFAQAIGEEAHALGLLQA 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T+ YPT A RPAYS LD S + + W+ +R +L + Sbjct: 241 VARVKPIRTEDYPTPARRPAYSVLDKSLSWRDFEMPPTHWRSQLRAVLTRL 291 >gi|167765062|ref|ZP_02437175.1| hypothetical protein BACSTE_03448 [Bacteroides stercoris ATCC 43183] gi|167696690|gb|EDS13269.1| hypothetical protein BACSTE_03448 [Bacteroides stercoris ATCC 43183] Length = 284 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 158/286 (55%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ + ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRVLSAENQQHTYFFTDVQELDICDEQAIRAFVTDNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG+ P E Sbjct: 61 AYTAVDKAEDNPELCNKLNHIAPGYLAAAAEACGAAMIQVSTDYVFDGIGHIPYTEEVTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL ER + VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMEKCSRAMVIRTAWLYSIYGNNFVKTMIRLGNERERLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAVNQGI------VPGIYHFSNE-GVCSWYDFTVAIHRMA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T I I W++ ++ Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIEIPHWEDSLQ 276 >gi|118476794|ref|YP_893945.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis str. Al Hakam] gi|118416019|gb|ABK84438.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis str. Al Hakam] Length = 284 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NIGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|330887875|gb|EGH20536.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. mori str. 301020] Length = 302 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGDLCGDLSDLESLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGDTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQNGVARMLM 297 >gi|58039512|ref|YP_191476.1| dTDP-4-dehydrorhamnose reductase [Gluconobacter oxydans 621H] gi|58001926|gb|AAW60820.1| dTDP-4-dehydrorhamnose reductase [Gluconobacter oxydans 621H] Length = 297 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 112/287 (39%), Positives = 157/287 (54%), Gaps = 6/287 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+A SL ++ + IIRVGRP+ D +P+ A+ + P V++N AA+TA Sbjct: 7 ILVTGGNGQLATSLQNLGNE--RIIRVGRPEFDFDRPETIAATIEKYKPSVVVNAAAWTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E + A N G A+A A IP I++STDYVF G TP E T+P Sbjct: 65 VDLAETEKDGAERANNSGPAALAAACAKADIPFIHVSTDYVFSGDKGTPYTEEDATSPET 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE+ V + +ILRT+WVYS G NF+ +M+ + + VV DQ G P Sbjct: 125 VYGSTKAEGEQAVLTANIKSIILRTSWVYSAHGKNFVRTMINAGAKNPVLKVVGDQKGNP 184 Query: 183 TSALQIARAIIQIAHNLIENS--DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TS+ +A AI+ I LIE RGIFH + G +W A E+A+ G Sbjct: 185 TSSDDLAEAILAII-ALIERDGWKPEYRGIFHASGT-GETTWHGLAVAALEEAAKHGQTM 242 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T+ +PT A RP S +D SKL +++ W+ V +I+ Sbjct: 243 PQVNAIRTEDWPTPAKRPQDSRMDNSKLHRVFGVKMPDWRHSVTHIV 289 >gi|257481997|ref|ZP_05636038.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008857|gb|EGH88913.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 302 Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGDLCGDLSDLESLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDVVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--ITTAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 297 >gi|228938438|ref|ZP_04101047.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971317|ref|ZP_04131944.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977927|ref|ZP_04138308.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407] gi|228781844|gb|EEM30041.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407] gi|228788353|gb|EEM36305.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821175|gb|EEM67191.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938945|gb|AEA14841.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 284 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|291617822|ref|YP_003520564.1| RfbD [Pantoea ananatis LMG 20103] gi|291152852|gb|ADD77436.1| RfbD [Pantoea ananatis LMG 20103] gi|327394238|dbj|BAK11660.1| probable dTDP-4-dehydrorhamnose reductase RfbD [Pantoea ananatis AJ13355] Length = 311 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 111/281 (39%), Positives = 158/281 (56%), Gaps = 12/281 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + L D + G ++D+ F PDVI+N AAY Sbjct: 24 MRVLLTGAYGQLGRCLLDRFPADWITLACGSAELDITDRCAVMRVVKKFKPDVIMNAAAY 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A +NA G +A+AA + I+ISTDYVFDGL +T E P P Sbjct: 84 TAVDKAETDRTRALKVNAIGPENLAQAAKLVNARLIHISTDYVFDGLKKTSYSENDPPCP 143 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK GE++V +++RT+W++S +G+NF+ +MLRLA+ R E+ VV DQ+G Sbjct: 144 INFYGLSKWEGEKRVFEALPEAIVIRTSWMFSEYGNNFVSTMLRLAQTRSELHVVNDQYG 203 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A A+I +A + EN GI+H D VSW +FA+ IF +AE+ Sbjct: 204 CPTYAGDLAEAMIHLAGS-PEN-----MGIYHYCGDIA-VSWCEFAQAIF-VAAEK---E 252 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V I + QYP+ A RPA S L+ + + I S W+E Sbjct: 253 VNVRGITSSQYPSAATRPARSILNTEHITSA-GITASDWQE 292 >gi|87201248|ref|YP_498505.1| dTDP-4-dehydrorhamnose reductase [Novosphingobium aromaticivorans DSM 12444] gi|87136929|gb|ABD27671.1| dTDP-4-dehydrorhamnose reductase [Novosphingobium aromaticivorans DSM 12444] Length = 285 Score = 178 bits (452), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+ ++L + + + + R +DL A + PD++ N AAY Sbjct: 1 MKALVTGVGGQLGRALLATAPEGWTCVALDRAALDLGDADAIARIVETEQPDLVFNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A +INA GA A+A G + +STD+VFDG S + NP Sbjct: 61 TAVDKAESEPELANAINAGAPGAFARALAGSGKRLVQVSTDFVFDGASGHGYRPGNARNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG SK AGE+ ++ +I+RT+WVY+ G+NF+ +MLRL +ER E+ VV DQ G Sbjct: 121 QSVYGASKAAGEDAAG---DDAIIVRTSWVYAAGGANFVRTMLRLMREREELRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 +PT A +AR + +A GI+H D G SW DFA I E+ G Sbjct: 178 SPTWATGLARTLWGLAA-------ADRPGIYHHR-DAGVASWYDFAVAIAEEAHALGLIA 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A RP++S LD S + W+ ++ +L Sbjct: 230 RIPAIVPIATSDYPTPAKRPSFSVLDVSGTRSLLGDAHVHWRTNLKTML 278 >gi|229068877|ref|ZP_04202171.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185] gi|229078514|ref|ZP_04211074.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2] gi|228704830|gb|EEL57256.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2] gi|228714161|gb|EEL66042.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185] Length = 284 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|229043066|ref|ZP_04190796.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676] gi|228726307|gb|EEL77534.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676] Length = 284 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERGEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|53720293|ref|YP_109279.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei K96243] gi|53725965|ref|YP_103574.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 23344] gi|76812050|ref|YP_334533.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710b] gi|121601563|ref|YP_992266.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei SAVP1] gi|124384550|ref|YP_001028708.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10229] gi|126448714|ref|YP_001081386.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10247] gi|126454004|ref|YP_001067376.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106a] gi|134280118|ref|ZP_01766829.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 305] gi|167000833|ref|ZP_02266638.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei PRL-20] gi|167720869|ref|ZP_02404105.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei DM98] gi|167739851|ref|ZP_02412625.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 14] gi|167817073|ref|ZP_02448753.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 91] gi|167825483|ref|ZP_02456954.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 9] gi|167846973|ref|ZP_02472481.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei B7210] gi|167895555|ref|ZP_02482957.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 7894] gi|167912204|ref|ZP_02499295.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 112] gi|167920165|ref|ZP_02507256.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei BCC215] gi|237813505|ref|YP_002897956.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei MSHR346] gi|238560978|ref|ZP_00442592.2| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei GB8 horse 4] gi|242314991|ref|ZP_04814007.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106b] gi|254175751|ref|ZP_04882411.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 10399] gi|254180917|ref|ZP_04887515.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1655] gi|254191762|ref|ZP_04898265.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pasteur 52237] gi|254196080|ref|ZP_04902505.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei S13] gi|254202264|ref|ZP_04908627.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei FMH] gi|254207597|ref|ZP_04913947.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei JHU] gi|254258629|ref|ZP_04949683.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710a] gi|254298970|ref|ZP_04966420.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 406e] gi|254356501|ref|ZP_04972777.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei 2002721280] gi|3135677|gb|AAD05457.1| putative dTDP-4-keto-L-rhamnose reductase [Burkholderia pseudomallei 1026b] gi|52210707|emb|CAH36691.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei K96243] gi|52429388|gb|AAU49981.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 23344] gi|76581503|gb|ABA50978.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710b] gi|121230373|gb|ABM52891.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei SAVP1] gi|124292570|gb|ABN01839.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10229] gi|126227646|gb|ABN91186.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106a] gi|126241584|gb|ABO04677.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10247] gi|134248125|gb|EBA48208.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 305] gi|147746511|gb|EDK53588.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei FMH] gi|147751491|gb|EDK58558.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei JHU] gi|148025498|gb|EDK83652.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei 2002721280] gi|157808904|gb|EDO86074.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 406e] gi|157939433|gb|EDO95103.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pasteur 52237] gi|160696795|gb|EDP86765.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 10399] gi|169652824|gb|EDS85517.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei S13] gi|184211456|gb|EDU08499.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1655] gi|237504413|gb|ACQ96731.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei MSHR346] gi|238525294|gb|EEP88722.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei GB8 horse 4] gi|242138230|gb|EES24632.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106b] gi|243063263|gb|EES45449.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei PRL-20] gi|254217318|gb|EET06702.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710a] Length = 298 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 153/296 (51%), Gaps = 21/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR---------GIFHMTADGGPVSWADFAEYIF- 230 PT A IA AH L T++R G++HMT+ G SW FA+ I Sbjct: 181 APTWARSIADG---TAHALT----TAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIA 232 Query: 231 -WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 W +A P S++ I YP A RPA S L L I + W+ V Sbjct: 233 SWRAAPGAAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYAV 288 >gi|317130377|ref|YP_004096659.1| dTDP-4-dehydrorhamnose reductase [Bacillus cellulosilyticus DSM 2522] gi|315475325|gb|ADU31928.1| dTDP-4-dehydrorhamnose reductase [Bacillus cellulosilyticus DSM 2522] Length = 284 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + ++ + +I G ++D+ + ++ PD II+ AA Sbjct: 1 MKILVTGFNGQLGFDVVRIGNENGMTMIGTGIEELDITDQTNVDTYVKKIKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E ++ +N EG + AA IYISTDYVF+G P E + Sbjct: 61 YTAVDKAEDEKEQSWKVNVEGTKYLVDAAKKNEAKFIYISTDYVFNGEGENPYIETDQPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG +K GE+ V + I+R +WV+ I G+NF+ +MLRL++ +++VV DQ+ Sbjct: 121 PVSYYGITKYEGEKVVRDSLEKWFIIRISWVFGINGNNFIKTMLRLSETNSQLNVVGDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ +I + T GI+H+T + G SW DFA IF ++ + Sbjct: 181 GSPTYTYDLAKLLIDMVK-------TEKYGIYHVTNE-GFCSWYDFANEIFRQANKE--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T ++PTKA RPA S + KL + + WK V++ L Sbjct: 230 -VKVNSITTDKFPTKAKRPANSKMSKQKLVDNGFKSLPDWKNAVKHYL 276 >gi|33591367|ref|NP_879011.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis Tohama I] gi|33571009|emb|CAE40488.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis Tohama I] gi|332380768|gb|AEE65615.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis CS] Length = 298 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 152/286 (53%), Gaps = 11/286 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + R DL A+ +++P ++IN AAY Sbjct: 1 MNILLLGRTGQIGDALLAHPPAWARLAALDRRQADLRDLGRLAAVLDAYAPRILINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 61 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 121 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 180 Query: 181 TPTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 P A +IA Q AH D G++H++A GG VSW A +I + G Sbjct: 181 APIWAGRIAAVTWQAIDAHRRRRLPD----GLWHLSA-GGHVSWHGLACHIVARARRAGL 235 Query: 239 PYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S + + QYP A RPA S LDC L + + W+ Sbjct: 236 ALSLDPAHIRPVTAAQYPLPAPRPANSRLDCGALRDALEPELPDWQ 281 >gi|309378197|emb|CBX23169.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 287 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLASAAHRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII+ L++ S + +RGI+H A G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIR----LLQQS-SPVRGIYHF-AGGKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|126440197|ref|YP_001060113.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 668] gi|126219690|gb|ABN83196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 668] Length = 300 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 153/296 (51%), Gaps = 21/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR---------GIFHMTADGGPVSWADFAEYIF- 230 PT A IA AH L T++R G++HMT+ G SW FA+ I Sbjct: 181 APTWARSIADG---TAHALT----TAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIA 232 Query: 231 -WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 W +A P S++ I YP A RPA S L L I + W+ V Sbjct: 233 SWRAAPGAAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYAV 288 >gi|157161534|ref|YP_001458852.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli HS] gi|300946365|ref|ZP_07160643.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 116-1] gi|157067214|gb|ABV06469.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli HS] gi|300453957|gb|EFK17577.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 116-1] Length = 296 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V D DL + A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLEGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATSPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTAMAIRETLRNP--ALAGTYHLVAS-GETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|325527143|gb|EGD04546.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. TJI49] Length = 299 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 112/288 (38%), Positives = 148/288 (51%), Gaps = 7/288 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL + S P +I+NPAAYTAV Sbjct: 13 LVTGVNGQVGFELLRTLQGLGRVVACDRSMLDLSDLERVRSVVRDLKPSIIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + E A +NA+ A+ A G I+ STDYVFDG E TNP N+ Sbjct: 73 DKAETDIEGARRLNADVPRVFAEEAARSGAVLIHYSTDYVFDGTKDGAYVETDATNPQNV 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ +V DQ G PT Sbjct: 133 YGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELKIVADQIGAPT 192 Query: 184 SALQIARAIIQI-AHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA I A L +S R G++H A GG SW FAE IF G Sbjct: 193 WSNSIATLTAHIVAQGLAVDSPEWWRARSGVYHFAA-GGETSWHGFAESIF--RLALGDK 249 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I +YP A RPA S + KLA T +R+ W + ++ L Sbjct: 250 APRTIPIPASEYPVPARRPANSRMSGDKLAQTFGVRMPAWDDALKLCL 297 >gi|206977710|ref|ZP_03238602.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus H3081.97] gi|217958798|ref|YP_002337346.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH187] gi|222094945|ref|YP_002529005.1| dtdp-4-dehydrorhamnose reductase [Bacillus cereus Q1] gi|229138010|ref|ZP_04266608.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST26] gi|206744138|gb|EDZ55553.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus H3081.97] gi|217067250|gb|ACJ81500.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH187] gi|221239003|gb|ACM11713.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus Q1] gi|228645355|gb|EEL01589.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST26] Length = 284 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNIMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|88800555|ref|ZP_01116117.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] gi|88776700|gb|EAR07913.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] Length = 295 Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G GQ+ L +I+ ++DL F P +++N AAY Sbjct: 1 MTVLITGGTGQVGFELQRTLAVFGDIVAPTPEELDLADASAVERFLEQTHPTIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+EPE+A ++NA+ +A ++ STDYV+DG + E P NP Sbjct: 61 TAVDKAEEEPELAQALNADLPAQLANYCARQSAWLVHYSTDYVYDGAGESFRTEDHPVNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAG+ + + + I RT+WVY G NF+ +MLRL + + E++VV DQ G Sbjct: 121 LSVYGKTKLAGDNAIEASGAQHFIFRTSWVYGARGHNFVKTMLRLGESKSELNVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+ AR I Q+ + + + G++H+ +W FA+ IF +++E G Sbjct: 181 APTT----ARLIAQVTSQALAQRNAANIGLYHLVCR-ETCNWQGFAQAIFQQASELGKAL 235 Query: 241 S----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T YPT A RP S L SKL T +++ TW+ ++ +L Sbjct: 236 AITPQAVAGIPTSDYPTPAKRPLNSRLIVSKLEETFKLKLPTWQSQLQQVL 286 >gi|330995799|ref|ZP_08319696.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT 11841] gi|329574529|gb|EGG56094.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT 11841] Length = 295 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 155/290 (53%), Gaps = 28/290 (9%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFSPDV 53 LV G NGQ+ + +++ G P+ +D+ SF + D Sbjct: 14 LVTGCNGQLGNEM--------QLLATGYPEFNYFFTDVKELDITDENAVKSFVKTNGIDC 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AAYTAVDKAE + +N G +AKA G I +STDYVFDG + P Sbjct: 66 VVNCAAYTAVDKAEADEAFCNILNHIAPGYLAKAVHEQGGCMIQVSTDYVFDGTTHIPYR 125 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E PT P +YG++KLAGEE V VI+RTAW+YS FG+NF+ +MLRL +E+ + Sbjct: 126 EEEPTCPATVYGRTKLAGEEAVMRNCPESVIIRTAWLYSTFGNNFVKTMLRLGREKESLG 185 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V+ DQ GTPT A +A AI + + + GI+H + +G +SW DF + I + Sbjct: 186 VIFDQIGTPTYARDLAVAIFAVL------TQDFVPGIYHFSNEGA-ISWYDFTKAIHRIA 238 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G KV + T++YP A RP YS LD +K+ T++I I W++ + Sbjct: 239 ---GITTCKVRPLHTEEYPAPAARPHYSVLDKTKIKETYHIDIPYWEDSL 285 >gi|296137703|ref|YP_003644947.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|295981872|emb|CBH22830.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 302 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 99/276 (35%), Positives = 146/276 (52%), Gaps = 4/276 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ +L + GR +DL + PD+++N AAYT V Sbjct: 9 LLLGATGQVGHALRRTLAPLGRVHTPGRAAVDLTDLTSVRAAVQELGPDLVVNAAAYTDV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE+EPE A INAE +A+AA ++G ++ STDYVFDG R P E NP+N+ Sbjct: 69 DGAEEEPERASRINAEAPRVLAEAARAVGAWLVHYSTDYVFDGTKRAPYTEADAPNPINV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 Y ++K GE + + ++ILRT+W+YS SNF+ +ML LA E ++VV DQ G PT Sbjct: 129 YSRTKRDGEAAIQAVGGRHLILRTSWMYSRRRSNFVRTMLGLADENDRLTVVDDQIGVPT 188 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A A A I L+ D +L G++H+ A G SW A A+ G + + Sbjct: 189 WAGWCAEATASICERLLAEDDAALSGLYHL-AGTGQTSWYGLARAAL---AQFGRTDTAI 244 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + +Y T A RPAY+ LD S++ ++ W Sbjct: 245 EPVSSGEYETAAPRPAYTVLDSSRVRAAFDLPAVPW 280 >gi|229056956|ref|ZP_04196351.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603] gi|228720345|gb|EEL71919.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603] Length = 284 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ IG +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLIGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHKMLQLNGFLQMPTWEEGLERFFI 279 >gi|296331422|ref|ZP_06873894.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676407|ref|YP_003868079.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151537|gb|EFG92414.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414651|gb|ADM39770.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 283 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 157/287 (54%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRYSFGHYQPDIVVNTAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+SIN GA A A IG I+ISTDYVFDG P E P +P Sbjct: 63 TSVDKCETELDKAYSINGIGAYYTAMEATRIGAQYIHISTDYVFDGRGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +MLRLA+ ++E+ VV DQ G Sbjct: 123 NTIYGKSKKLGEELIRLATKDSTIIRTSWVYGHGGSNFVQTMLRLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H++ + G SW +FA+ I +S G Sbjct: 183 SPTYTKDLAEAVIKLF--------SHPPGIYHVS-NSGICSWYEFAKAIMEDS----GLA 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TVILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYL 275 >gi|88802243|ref|ZP_01117770.1| dTDP-4-dehydrorhamnose reductase [Polaribacter irgensii 23-P] gi|88781101|gb|EAR12279.1| dTDP-4-dehydrorhamnose reductase [Polaribacter irgensii 23-P] Length = 291 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 102/285 (35%), Positives = 154/285 (54%), Gaps = 7/285 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+NGQ++ + + ++ ++D+ F + +IN A Sbjct: 1 MNILVTGSNGQLSSEIKDIAADYKNFNFFFTSSLELDICNSSQVNIFINENNIHTVINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + E+A +N+EG + A +G I+ISTDYVFDG P E Sbjct: 61 AYTAVDKAEQDAEVAEKVNSEGVQNLVNAIAKVGGKLIHISTDYVFDGNGFLPYQESDKV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ +YG +K +GE V + + +++RT+W+YS +G+NF+ +MLRL ER E+ V+ DQ Sbjct: 121 NPIGVYGNTKRSGELAVFNSDIDGIVIRTSWLYSAYGNNFVKTMLRLGNERDELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A+ + I E + S ++H + + G SW DFA I + G Sbjct: 181 VGTPTNASDLAKTCLDILSYDKETNINSKGNMYHFSNE-GVASWYDFAVAIM----KLGN 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV I TK YPT A RP +S L+ SK+ I I W++ + Sbjct: 236 VDCKVKPIETKDYPTPAKRPHFSVLNKSKIKTDFEIEIPYWRDSL 280 >gi|308187470|ref|YP_003931601.1| dTDP-4-dehydrorhamnose reductase [Pantoea vagans C9-1] gi|308057980|gb|ADO10152.1| dTDP-4-dehydrorhamnose reductase [Pantoea vagans C9-1] Length = 295 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 109/297 (36%), Positives = 156/297 (52%), Gaps = 15/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L +I V R D + A P VI+N Sbjct: 1 MNILLFGKNGQVGWELQRALAPLGNLIVVDRHSSEYCGDFENSEGIAETVRRIKPAVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVDKAE E + A +NA ++A+AA+ IG I+ STDYVFDG P E Sbjct: 61 ATAYTAVDKAESEQDKARLVNATSIKSLAEAAEEIGAWLIHYSTDYVFDGSGDRPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GEE + S + ++I RT+WVY+ G+NF +ML+LAK+R +SV+ Sbjct: 121 ATAPLNVYGQTKLEGEEAIVSTMSRFLIFRTSWVYAAKGNNFAKTMLKLAKDRDTLSVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A IA I++A N D+S+ G++H+ A G +W +A + + Sbjct: 181 DQFGAPTGAELIADCTAHAIRVALN-----DSSVAGLYHLIA-AGETTWHAYASKVIAFA 234 Query: 234 AERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +G + + T +PT A RPA S L+ K + + W GV +L+ Sbjct: 235 KAQGVELQVQTINAVPTSAFPTPAKRPANSRLNTEKFQQAFGLNLPDWTVGVERMLL 291 >gi|301643906|ref|ZP_07243935.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 146-1] gi|301077726|gb|EFK92532.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 146-1] Length = 296 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 153/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V D DL + A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLEGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETLRNP--ALAGTYHLVAS-GETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|218902417|ref|YP_002450251.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH820] gi|228926358|ref|ZP_04089430.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120843|ref|ZP_04250085.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 95/8201] gi|218538668|gb|ACK91066.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH820] gi|228662503|gb|EEL18101.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 95/8201] gi|228833182|gb|EEM78747.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 284 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK GE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYVGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|229183521|ref|ZP_04310745.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BGSC 6E1] gi|228599931|gb|EEK57527.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BGSC 6E1] Length = 284 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++ + INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLTYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|332663274|ref|YP_004446062.1| dTDP-4-dehydrorhamnose reductase [Haliscomenobacter hydrossis DSM 1100] gi|332332088|gb|AEE49189.1| dTDP-4-dehydrorhamnose reductase [Haliscomenobacter hydrossis DSM 1100] Length = 285 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQI + L ++ + ++ I + R +D+ + D IN A Sbjct: 1 MTILITGANGQIGRELQALQAEFPGLQYIALDRSTLDMTNASAIQRVIAETTFDACINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPIDEFSP 117 AYT VDKAE E E+AF+INA G +A+A G+ I+ S+DYV+ +G++R P+ E Sbjct: 61 AYTTVDKAEQETELAFAINAHAPGILAEACWEKGVQLIHYSSDYVYHNGINR-PLLETDS 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + P +IY SKL G+++V + ++ RT+WVYS FG NF+ +MLRL +E+ + VV D Sbjct: 120 SMPRSIYAHSKLEGDKRVLAAHPGALVFRTSWVYSSFGHNFVKTMLRLGQEKEVLRVVND 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A IAR +QI L+ GIF+ + + G SW DFA IF + Sbjct: 180 QIGTPTYARDIARMSLQI---LLSEQSGEQAGIFNYSNE-GVCSWYDFARAIF----DLS 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V I + YPT A RP YS LD SK + I W++ + L Sbjct: 232 GIPCRVEPIPSTAYPTPAARPPYSVLDKSKFKAAFGLEIPYWRDSLVECL 281 >gi|228932596|ref|ZP_04095475.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827065|gb|EEM72820.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 284 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|260428713|ref|ZP_05782691.1| dTDP-4-dehydrorhamnose reductase [Citreicella sp. SE45] gi|260420307|gb|EEX13559.1| dTDP-4-dehydrorhamnose reductase [Citreicella sp. SE45] Length = 285 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 124/291 (42%), Positives = 160/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV+G +GQ+A+ L+++ +GR +DL P+ A+ +IN AA+ Sbjct: 1 MTVLVLGRSGQVARELAALPGMRC----MGREAMDLRDPQACAAALRDIPCTAVINAAAW 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A +NAE G +A+AA +G+P + ISTDYVFD P P P Sbjct: 57 TAVDKAESEEAEAHLLNAEAPGVMARAAAELGLPFVQISTDYVFDRAGTEPHLPDDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KLAGEE VA + ILRT+WV+S G+NF +MLRL +ER +++V DQ G Sbjct: 117 PNAYGRTKLAGEEAVAGAGGAHAILRTSWVFSAHGANFPRTMLRLGRERDRLTIVADQVG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A IARA IA L + S GI+H + G P VSWADFA IF R G Sbjct: 177 GPTFAGDIARACAAIAAQLQTRPEDS--GIYHYS--GAPDVSWADFAREIF----ARAGI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDCS + WK G+ +L I Sbjct: 229 SCAVEDIPTSAYPTPAVRPLNSRLDCSATKRIFGLDRPDWKAGLATMLQQI 279 >gi|302186454|ref|ZP_07263127.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae 642] Length = 302 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 162/299 (54%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHSVSTAYGELSGDLSDLNGLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAEAERELANTVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDVVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARAHGEPLAVETINPIGTSEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 297 >gi|188589422|ref|YP_001922561.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] gi|188499703|gb|ACD52839.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] Length = 297 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 163/300 (54%), Gaps = 25/300 (8%) Query: 1 MKCLVIGNNGQIAQSLS-------------SMCVQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G NGQ+ L S +++ ++I + ++D+ + + Sbjct: 1 MKILITGCNGQLGNELQDIIKKGYAEIGEISNTLKEADVIALDIDELDITNLNEVNKKII 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 S +PDVIIN AA T VD E + AF +N+ G +A A + I + +STDYVF G+ Sbjct: 61 SLNPDVIINCAAATNVDGCESNEDFAFKVNSLGPRNLAMACEKIRAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 S P+ E+ T P ++YGK+KL GE V + + Y I+RT+W+Y G+NF+ +M +L K Sbjct: 121 SEKPLTEYDLTAPYSVYGKTKLLGENYVREFCSKYFIVRTSWLYGYVGNNFVYTMRKLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ I+VV DQ G PT+A +A I++ LIE+ + G++H T G +W DFA+ Sbjct: 181 DKDTINVVNDQKGNPTNANDLAYHILK----LIESEE---YGVYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I S E+ +V +++Y T A RP YS LD L NT + WK+ +++ + Sbjct: 233 MIIEISGEK----CEVNPCTSEEYKTPAKRPEYSSLDNMMLRNTVGDEMRHWKDAIKSFI 288 >gi|316935620|ref|YP_004110602.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris DX-1] gi|315603334|gb|ADU45869.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 115/289 (39%), Positives = 153/289 (52%), Gaps = 5/289 (1%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G +GQ+A +L + V + +GR D+D+L ++N AA Sbjct: 1 MTVLVFGRSGQVATALVREAAARGVALQALGRGDVDVLDEAALVDAMTRIGAAAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E + AF++NA +AK +P +++STDYVFDG + P E P Sbjct: 61 YTAVDKAETERDAAFALNARAPELMAKVCADRSLPFVHLSTDYVFDGSAHEPYREDHPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK GE V ++LRTAWVY G NF+ +MLRL +ER E+ VV DQ Sbjct: 121 PLGVYGASKAEGERLVMQQHPQAIVLRTAWVYYEQGQNFVRTMLRLGRERDEVRVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA + I L + + G+FH A G VSW FA+ IF E+A G Sbjct: 181 GNPTYAADIAETCLAIVAQLGAGARHA--GVFHY-AGSGAVSWFGFAQAIFAEAARAGRR 237 Query: 240 YSK-VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T +YPT A RPA S L C +L + I W + +R L Sbjct: 238 VPRSVVPITTAEYPTPAKRPANSQLSCGRLNDAFGIAPKPWGDRLRVCL 286 >gi|162149145|ref|YP_001603606.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|209545111|ref|YP_002277340.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|161787722|emb|CAP57318.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|209532788|gb|ACI52725.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] Length = 297 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 4/288 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LVIG +GQ+A +L + + GRPD+D +P+ + +P +++N AA+TAV Sbjct: 7 LVIGRSGQLATALGRSNSPGLHCL--GRPDLDFDRPETVDTAIAEAAPGLVVNAAAWTAV 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AED+ A N +G +A+ + GIP I++STDYVFDG P E PT+P + Sbjct: 65 DAAEDDVAGAERANRDGPAHLARLCAARGIPLIHVSTDYVFDGTKGAPYVETDPTSPRTV 124 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SK GE+ + + + +ILRTAWVYS +G NF+ +ML + + VV DQ G PT Sbjct: 125 YGRSKAEGEQAILAVHDRAIILRTAWVYSPYGRNFVRTMLNAGAKNPVLRVVGDQRGNPT 184 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 SA +A AI+ IA + + + GI H A G +W A ++A G P Sbjct: 185 SADDLAGAILSIADTIARDGWRDAFAGITH-AAGSGDTTWHGLAVAALQDAARLGRPMPV 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +PT A RP S LDC++L + +R+ W++ V + + Sbjct: 244 VEAITTADWPTPAARPQDSRLDCTRLHDVFGVRLPHWRDSVARTVTTL 291 >gi|163789265|ref|ZP_02183707.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1] gi|159875480|gb|EDP69542.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1] Length = 293 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 161/285 (56%), Gaps = 15/285 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAY 60 LV + Q+A+ + S+ V I D+D+ K S F S D IN AAY Sbjct: 5 LVTAKDSQLARCIESISKNHPKVNFIFKSSSDLDITKKTHVQSVFNSIKDLDYCINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 TAVDKAE++ A+S+N G+ +A+A + ++ISTD+VF+G P E S T Sbjct: 65 TAVDKAEEDTINAYSVNVLGSKNLAEACYEYEVTLVHISTDFVFNGTVPVPQPYSEDSNT 124 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YG++KL GE+ +A + I RT+W++S FG+NFL +ML+LA ER EI+VV DQ Sbjct: 125 GPLSVYGETKLKGEKVIAETIKKHFIFRTSWMFSEFGNNFLKTMLKLATERNEINVVSDQ 184 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A+ I+ +N GIFH + G +W +FA+ IF S + G Sbjct: 185 IGSPTYARDLAKVILCFIEKEYKN-----YGIFHY-CNRGSTTWYNFAKEIF--SLSQKG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 K+ ++ TK YPT A RP YS LD SK+ T + W++ + Sbjct: 237 --VKLNKVKTKDYPTLAARPKYSVLDTSKIEQTLGVTPLKWEDSL 279 >gi|150009110|ref|YP_001303853.1| putative dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis ATCC 8503] gi|255015731|ref|ZP_05287857.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_7] gi|262384010|ref|ZP_06077146.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B] gi|149937534|gb|ABR44231.1| putative dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis ATCC 8503] gi|262294908|gb|EEY82840.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B] Length = 287 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 159/281 (56%), Gaps = 13/281 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + Q + +D+ + + L ++N AAYT Sbjct: 5 LVTGANGQLGNSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E T P+ Sbjct: 65 AVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDATCPV 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + DQ GT Sbjct: 125 SVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFDQVGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A A++ + +E ++ + GI+H + D G SW DF I + G Sbjct: 185 PTYAGDLAVAMLAV----LERAEAGKFIPGIYHFS-DEGVCSWYDFTVKIL----QIAGM 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++V I TK YPT A RP YS L+ K+ +T+ + I W+ Sbjct: 236 NNRVIPIETKDYPTPASRPHYSVLNKGKIKSTYGLTIPHWE 276 >gi|320535549|ref|ZP_08035649.1| dTDP-4-dehydrorhamnose reductase [Treponema phagedenis F0421] gi|320147610|gb|EFW39126.1| dTDP-4-dehydrorhamnose reductase [Treponema phagedenis F0421] Length = 289 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 161/290 (55%), Gaps = 15/290 (5%) Query: 5 VIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV----IINPAA 59 +IG+ G +A ++ + Q++ I R + D+ K +F+ + D IIN AA Sbjct: 4 LIGSKGMLASEVAVLLDKQNLPWIGSDR-ETDITDKKSLENFYKNNFSDTECAWIINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE + A INAE I + A I+ISTDYVFDG S P E N Sbjct: 63 YTAVDKAEDEFKQAECINAEALIHICEIAKKHNAKLIHISTDYVFDGASAIPYTENDEPN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGK+KL GE+ + + Y I+RTAW+Y G NF+ +MLRL ER +++VV DQ Sbjct: 123 PQSVYGKTKLQGEQNIKKILHEYYIIRTAWLYGKNGQNFVSTMLRLMNERNKLTVVNDQR 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A+ +A+ I+ I I G++H + +G +SW DFA I+ + Sbjct: 183 GSPTYAVDLAQVIVSIIQKQIPT------GVYHYSNEGN-ISWYDFACEIYTQGKHLNVI 235 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + + ++P KA RP+YS LD +K+ I + WKE ++N L Sbjct: 236 HNDCDIVPCTSSEFPQKAKRPSYSLLDKTKIKTALQIMVPDWKESLKNYL 285 >gi|298377135|ref|ZP_06987089.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|298266119|gb|EFI07778.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] Length = 287 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 162/290 (55%), Gaps = 13/290 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + Q + +D+ + + L ++N AAYT Sbjct: 5 LVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E T P+ Sbjct: 65 AVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDATCPV 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + DQ GT Sbjct: 125 SVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFDQVGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A A++ + +E ++ + GI+H + D G SW DF I + G Sbjct: 185 PTYAGDLAVAMLTV----LERAEAGKFIPGIYHFS-DEGVCSWYDFTVKIL----QIAGM 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I TK YPT A RP YS L+ K+ +T+ + I W+ + + N Sbjct: 236 NNRVIPIETKDYPTPASRPHYSVLNKGKIKSTYGLTIPHWETSLAYCMNN 285 >gi|160888769|ref|ZP_02069772.1| hypothetical protein BACUNI_01187 [Bacteroides uniformis ATCC 8492] gi|317479486|ref|ZP_07938618.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] gi|156861668|gb|EDO55099.1| hypothetical protein BACUNI_01187 [Bacteroides uniformis ATCC 8492] gi|316904386|gb|EFV26208.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 284 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ + ++D+ + F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSKENGQHAYFFTDVQELDICDEQAVHGFVKDNRIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG TP E + T Sbjct: 61 AYTAVDKAEDNQELCDKLNHVAPGYLAAAAEACGAALIQVSTDYVFDGTGHTPYTEEAAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V Y + +I+RTAW+YSI+G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLAGEQAVMKYCSRAMIIRTAWLYSIYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI S + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAI------SQGIVPGIYHFSNE-GVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD +K+ T I I W+ + + N+ Sbjct: 231 KSCKVSPLHTDEFPAKAPRPHYSVLDKTKIKKTFGIDIPHWEASLAVCMKNL 282 >gi|163859122|ref|YP_001633420.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii DSM 12804] gi|163262850|emb|CAP45153.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii] Length = 323 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 104/285 (36%), Positives = 151/285 (52%), Gaps = 11/285 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G GQI +L + I R DL + + PD+I+N AA Sbjct: 21 MKILLLGATGQIGNALRRTLLPLGSITAPSRAQADLANLDGLRALLQAQVPDLIVNAAAC 80 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE++P A +NAE +A A G ++ STDYVFDG +TP E +P Sbjct: 81 TAVDQAENDPAPARRVNAEAVAVLAAHARKSGALLVHYSTDYVFDGAKQTPYLETDAPHP 140 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++LRT+WVY+ G NF+ ++L+LA++R E+ VV DQFG Sbjct: 141 LNEYGRSKLAGEQAIAASGCRALVLRTSWVYAAHGRNFVKTVLQLAQQRDELRVVADQFG 200 Query: 181 TPTSALQIA--RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA +A A+ AH + D G++H+ A G SW + A + + +G Sbjct: 201 APTSAELVADVTALALAAHRRQQLPD----GLYHLCA-AGTASWHELACHSVRRARRQGM 255 Query: 239 PY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 ++ I YP A RP S LD +LA + + W Sbjct: 256 ALRLRPEHIHAIGADDYPLPAPRPRNSRLDTQRLAGALGLELPDW 300 >gi|332880173|ref|ZP_08447855.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681932|gb|EGJ54847.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 295 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 151/284 (53%), Gaps = 16/284 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + E ++D+ K SF D I+N AAYT Sbjct: 14 LVTGCNGQLGNEMQLLAAGHPEFNYFFTDVKELDITDEKAVKSFVGMHEIDCIVNCAAYT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + +N G +AKA G I +STDYVFDG + P E PT P Sbjct: 74 AVDKAESDEAFCDLLNHTAPGYLAKAVHERGGCMIQVSTDYVFDGTAHIPYREEEPTCPA 133 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KLAGEE V V++RTAW+YS FG+NF+ +MLRL +E+ + V+ DQ GT Sbjct: 134 TAYGRTKLAGEEAVMRNCPESVVIRTAWLYSTFGNNFVKTMLRLGREKESLGVIFDQIGT 193 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A AI + + + GI+H + +G +SW DF + I R + Sbjct: 194 PTYARDLAVAIFAVL------TQDFVPGIYHFSNEGA-ISWYDFTKAI-----HRIADIT 241 Query: 242 --KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV + T++YP A RP YS LD +K+ T++I I W++ + Sbjct: 242 TCKVRPLHTEEYPAPAARPHYSVLDKTKIKETYHIDIPYWEDSL 285 >gi|302343716|ref|YP_003808245.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075] gi|301640329|gb|ADK85651.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075] Length = 315 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 152/287 (52%), Gaps = 3/287 (1%) Query: 5 VIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++G GQ+ + L + + + R ++D+ P + + +++N AAYTAV Sbjct: 17 ILGAGGQLGREMLRATPPAGLGLRGFSRQELDVTDPTALMAAIGAADCALVVNCAAYTAV 76 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + +F++N G A+A+A D +P +++ST+Y+FDG P E +PLN Sbjct: 77 DKAESDVQASFAVNVGGVAAMARACDEAAVPLVHVSTEYIFDGRKNGPYVEADQPSPLNA 136 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+ K E V +VILRT+W++S G NF+ ++LRLA+ + VV DQ G PT Sbjct: 137 YGQGKAEAERHVRLLAKRHVILRTSWLFSAHGHNFVKTILRLAQSHERLRVVVDQIGCPT 196 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A AI+ IA L+ G FH GPVS +FA I ++ G ++ Sbjct: 197 PARDMAEAIMHIAGQLLAGKQDGF-GTFHYCG-AGPVSRLEFARAIVEQARPHLGETPEI 254 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +PT A RPA LDC+K+ + + +W+ G+ +++ + Sbjct: 255 APTSQSAFPTPAARPANCVLDCAKIVKAYGLAQKSWEPGLADVITEL 301 >gi|296114301|ref|ZP_06832955.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter hansenii ATCC 23769] gi|295979062|gb|EFG85786.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter hansenii ATCC 23769] Length = 298 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 151/281 (53%), Gaps = 4/281 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+A SL+ V +I+VGRPD D +P+ + + P ++N AA+TAV Sbjct: 11 LVTGGNGQLAVSLAD--VGGARVIKVGRPDFDFDRPETIDAVVARYDPAFVVNAAAWTAV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE E A N G +A A G I+ISTDYVF G TP E PT+P + Sbjct: 69 DAAETEVAAASRANQTGPAILAAACAVQGCGLIHISTDYVFAGDKGTPYVESDPTSPRTV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K AGE V + +ILRTAWVYS G NF+ +M+ + ++ VV DQFG PT Sbjct: 129 YGATKAAGETAVLAACPQAIILRTAWVYSAHGKNFVKTMISAGAKNPKLRVVGDQFGNPT 188 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 SA +A+AI I + E + G++H TA G +W A ++A G + Sbjct: 189 SADDLAQAIFAIIARIEETGWQAAYPGVYHATAQ-GETTWYGLAVATLEQAARHGQALPE 247 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + I T+ +PT A RP S LDC+KL + + W++ V Sbjct: 248 IEAIRTQDWPTPAERPQDSRLDCTKLKQVFGVSLPNWRQSV 288 >gi|307609553|emb|CBW99053.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila 130b] Length = 294 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + +P I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCTLKNVPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PTSA IAR + +I I +S G++H A G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHY-AGQGVTNWHEFANVFLNMAKEKQLL 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I +++YPT+A RP S L+ +K+ I+ +WK + +++ Sbjct: 239 LTLTDLNPIKSQEYPTRATRPKNSVLNTTKIETILGIKSCSWKNDLPDVI 288 >gi|261409576|ref|YP_003245817.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. Y412MC10] gi|261286039|gb|ACX68010.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. Y412MC10] Length = 292 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 167/293 (56%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + S+ +++ GR ++D+ + + PD II+ AA Sbjct: 1 MKVLVTGAQGQLGKDVVSIFKGSKHDVLGCGRNELDINNLEQCHKIIKEYQPDCIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ INA G +A AA+S+G IYIS+DYVF+G S P E+ T+ Sbjct: 61 YTAVDAAESDSDQAYQINAIGTRNLAIAAESVGSKLIYISSDYVFNGRSDYPYVEYDRTD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSKLAGE + + + I+RT+W + + G+NF+ +MLRL +ER + VV DQ Sbjct: 121 PQSVYGKSKLAGEILTQTLCSKWFIVRTSWAFGLNGNNFVKTMLRLGQERTSLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES-AERGG 238 G+PT + +A ++++A DT G++H ++ G +W +F + IF E+ E G Sbjct: 181 GSPTFTIDLASFLLELA-------DTEKYGVYH-ASNQGECTWYEFTQAIFQEARKELGL 232 Query: 239 P-YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +++ T Q+P A RPA S L+ + + W++ ++ + + Sbjct: 233 PIKAELSPCTTDQFPRAAPRPANSVLEHMSIRTNGFADLPHWQDALKRFIAKM 285 >gi|107029155|ref|YP_626250.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116687026|ref|YP_840273.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105898319|gb|ABF81277.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116652741|gb|ABK13380.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 294 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 142/243 (58%), Gaps = 11/243 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++IN A +TAVD+AE EP+ A+ N +G +A A + GIP +++STDYVFDG P Sbjct: 52 LVINAAGWTAVDRAEAEPDAAWRANRDGPAVLADACAARGIPLLHLSTDYVFDGRLPGPY 111 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + PL +YG+SKLAGEE V + ++ILR AWV+ GSNF+ +MLRLA+ER Sbjct: 112 AEAAAVGPLGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGSNFVRTMLRLAREREV 171 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPV-SWADFAEYI 229 + VV DQ+G PT A IA A++ IA + +LR G +H+ G PV +W FAE I Sbjct: 172 VGVVADQYGGPTHAGAIADALLTIAARY--RAGEALRWGTYHLC--GTPVTTWHGFAETI 227 Query: 230 FWESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 F E A R G + V I T YP A RPA S LDCS L + +W G+ ++ Sbjct: 228 FTE-ARRTGLIDRVPLVRPIRTDAYPLPAPRPANSALDCSLLREHFGVESPSWIAGLTDV 286 Query: 287 LVN 289 Sbjct: 287 FAT 289 >gi|319902878|ref|YP_004162606.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] gi|319417909|gb|ADV45020.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] Length = 284 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 109/286 (38%), Positives = 157/286 (54%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ + ++D+ + +F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSQENFQHTYYFTDVQELDICDEQAVHTFVADHQVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG P E P Sbjct: 61 AYTAVDKAEDNVELCDKLNHLAPGYLAAAAEARGAVLIQVSTDYVFDGTGHLPYTEDMPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +I+RTAW+YS++G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMKNCSRAMIIRTAWLYSVYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +AR I + I + GI+H +D G SW DF I + G Sbjct: 181 IGTPTYANDLARVIFTAVNRGI------VPGIYHF-SDEGVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T ++P KA RP YS LD SK+ T I I W++ ++ Sbjct: 231 TTCKVSPLHTDEFPAKAPRPHYSVLDKSKIKKTFGIEIPHWEDSLQ 276 >gi|170732198|ref|YP_001764145.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169815440|gb|ACA90023.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/284 (38%), Positives = 145/284 (51%), Gaps = 7/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL S P +I+NPAAYTAV Sbjct: 8 LVTGVNGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRVRSVVRELKPSIIVNPAAYTAV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + A +NAE A A+ A +G ++ STDYVFDG E TNP N+ Sbjct: 68 DKAETDVDAARRLNAEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQNV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G PT Sbjct: 128 YGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAPT 187 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA A I + D G++H T+ G SW FAE IF ++ P Sbjct: 188 WSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQAMGERAP 246 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V I YP A RP+ S L KL +R+ W + + Sbjct: 247 --RVLPIPASDYPVPAKRPSNSRLSHDKLTEAFGLRLPDWADAL 288 >gi|254246149|ref|ZP_04939470.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia PC184] gi|124870925|gb|EAY62641.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia PC184] Length = 299 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/284 (38%), Positives = 145/284 (51%), Gaps = 7/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL S P +I+NPAAYTAV Sbjct: 13 LVTGVNGQVGFELLRSLQGLGRVVACDRSVLDLSDLDRVRSVVRELKPSIIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + A +NAE A A+ A +G ++ STDYVFDG E TNP N+ Sbjct: 73 DKAETDVDAARRLNAEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQNV 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G PT Sbjct: 133 YGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAPT 192 Query: 184 SALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA A I + D G++H T+ G SW FAE IF ++ P Sbjct: 193 WSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQAMGERAP 251 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V I YP A RP+ S L KL +R+ W + + Sbjct: 252 --RVLPIPASDYPVPAKRPSNSQLSHDKLTEAFGLRLPDWADAL 293 >gi|229095804|ref|ZP_04226783.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-29] gi|229114755|ref|ZP_04244169.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-3] gi|228668820|gb|EEL24248.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-3] gi|228687637|gb|EEL41536.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-29] Length = 286 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 6 RVIITGANGQLGKQLQEELSPEEYDIYPFDKKLLDVTNISRVQQVVQEIRPHIIIHCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 66 TKVDRAEKEQDLAYLINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHNPAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +GSNF+ +M+RL KE+ EI+VV DQ G Sbjct: 126 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGSNFVKTMMRLGKEKDEITVVADQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + + ++ H TSL G +H++ + G SW +FA+ IF Sbjct: 186 SPTYVADLNMMVNKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIF----SYANMN 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ ++A RP YS + L +++ +W+EG+ + Sbjct: 234 VNVLPVSTEEFGSEAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 281 >gi|171316143|ref|ZP_02905368.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171098747|gb|EDT43541.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 294 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/292 (36%), Positives = 158/292 (54%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + I + R +D+ P+ + ++IN AA+ Sbjct: 1 MTIVVTGALGQVGRELL-LRAGMRPTIGLSRAQLDIADPRAVRDALATHRATLVINAAAW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N G +A A + GIP +++STDYVFDG + DE + P Sbjct: 60 TAVDRAETEPDAAWRANCAGPATLADACAAAGIPLLHLSTDYVFDGRAPGAYDEAAGVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG +K AGEE V + ++ILR AWV+ G NF+ +MLR+ +ER E++VV DQ+ Sbjct: 120 LGVYGHTKWAGEEAVRQRLPDAHLILRIAWVFGAHGGNFVRTMLRVGRERDELAVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-SWADFAEYIFWESAERGG 238 G PT A +A A++ IA ++T G +H+ G PV +W FAE IF A R G Sbjct: 180 GGPTHAGAVADALLAIADRHCTGAETRW-GTYHLC--GTPVTTWHGFAETIF-RQARRAG 235 Query: 239 PYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T YP A RPA S LDC+++ I W + ++L Sbjct: 236 LIDRIPLVRPIRTAAYPLPAPRPANSALDCTRIREHFGIAAPCWIPALADVL 287 >gi|149185656|ref|ZP_01863972.1| dTDP-4-dehydrorhamnose reductase [Erythrobacter sp. SD-21] gi|148830876|gb|EDL49311.1| dTDP-4-dehydrorhamnose reductase [Erythrobacter sp. SD-21] Length = 282 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 156/293 (53%), Gaps = 15/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ ++L ++E+ R +D+ P VI+N AAY Sbjct: 1 MRVLLTGATGQVGKALRHSVPDNIELYPFDRTQLDIANETMVRRIVDRVRPQVILNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE+EP++A ++N + + KAA +I +++STD+VFDG + P T P Sbjct: 61 THVDGAEEEPDLAAAVNTQAVELLVKAASAIDAKLVHVSTDFVFDGEAGRPYRTADKTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG++K AGE + S + +++RTAWVY G NFL +MLRL +ER ++SVVCDQ G Sbjct: 121 KNVYGETKRAGERALRS---SDLLVRTAWVYDNSGRNFLTTMLRLFRERDKVSVVCDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT+A ++ A+ + LIE ++ G H T + G SW DFA I E A G Sbjct: 178 TPTTASDLSSALWR----LIE---ANVGGTQHFT-NSGVASWYDFAVAIA-EEARVAGLL 228 Query: 241 SKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 I + YPT A RP +S LDC + + S W +R L I Sbjct: 229 DHAVDIVPIPSSAYPTLAKRPHFSVLDCHETYRLIGVPASHWHAALRAALKEI 281 >gi|169342325|ref|ZP_02863396.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens C str. JGS1495] gi|169299550|gb|EDS81613.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens C str. JGS1495] Length = 295 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 157/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ +++ E+ + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVRALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMICEEIGAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I++ LIE T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILK----LIE---TEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E AE V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIM-ELAENK---CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|52144115|ref|YP_082713.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus E33L] gi|51977584|gb|AAU19134.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus E33L] Length = 284 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFGFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAVAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|49477141|ref|YP_035455.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328697|gb|AAT59343.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 284 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKSAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|152971028|ref|YP_001336137.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|152971034|ref|YP_001336143.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955877|gb|ABR77907.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955883|gb|ABR77913.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|260162547|dbj|BAI43789.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 152/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V D DL A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLDGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + D +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETLR--DPALAGTYHLVAS-GETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|182680401|ref|YP_001834547.1| dTDP-4-dehydrorhamnose reductase [Beijerinckia indica subsp. indica ATCC 9039] gi|182636284|gb|ACB97058.1| dTDP-4-dehydrorhamnose reductase [Beijerinckia indica subsp. indica ATCC 9039] Length = 299 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 3/288 (1%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ Q ++ + + + V R + D+ + S P +I+N AA+TA Sbjct: 10 LVFGAGGQLGQEVMAQGSARGLPVQGVKRAEADIGDAAAVTAAIESRKPRLILNAAAFTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE A N G +AKAA +P ++ISTDYVFDG + E P PL Sbjct: 70 VDKAESEPEAAHLANVVGIEILAKAAARFDVPLVHISTDYVFDGSKQGAYVESDPIKPLG 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE ++ + ++ILRTAWV+ +G+NFL +MLRLA ER + VV DQ G P Sbjct: 130 VYGATKAEGEARLRAAAPKHIILRTAWVFGPYGANFLKTMLRLAGERDLLRVVADQRGCP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T+ IA A+ I L + L G +H A +W FA+ I G K Sbjct: 190 TATADIAAAVFAIDQAL-DAPAADLWGTYHF-AGADATTWHAFADAIVEAQTRWSGRRPK 247 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+ YPT A RP S L+ A T R + E + L ++ Sbjct: 248 VEAITTQDYPTPAKRPQNSELNSGLFAATFGYRAAPLAERIAETLASL 295 >gi|59800778|ref|YP_207490.1| putative reductase [Neisseria gonorrhoeae FA 1090] gi|240013647|ref|ZP_04720560.1| putative reductase [Neisseria gonorrhoeae DGI18] gi|240080228|ref|ZP_04724771.1| putative reductase [Neisseria gonorrhoeae FA19] gi|240115181|ref|ZP_04729243.1| putative reductase [Neisseria gonorrhoeae PID18] gi|240117465|ref|ZP_04731527.1| putative reductase [Neisseria gonorrhoeae PID1] gi|240120717|ref|ZP_04733679.1| putative reductase [Neisseria gonorrhoeae PID24-1] gi|240125273|ref|ZP_04738159.1| putative reductase [Neisseria gonorrhoeae SK-92-679] gi|260441001|ref|ZP_05794817.1| putative reductase [Neisseria gonorrhoeae DGI2] gi|268596379|ref|ZP_06130546.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae FA19] gi|268600860|ref|ZP_06135027.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID18] gi|268603166|ref|ZP_06137333.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID1] gi|268683874|ref|ZP_06150736.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-92-679] gi|291044330|ref|ZP_06570039.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293399519|ref|ZP_06643672.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae F62] gi|59717673|gb|AAW89078.1| putative reductase [Neisseria gonorrhoeae FA 1090] gi|268550167|gb|EEZ45186.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae FA19] gi|268584991|gb|EEZ49667.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID18] gi|268587297|gb|EEZ51973.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID1] gi|268624158|gb|EEZ56558.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-92-679] gi|291011224|gb|EFE03220.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291610088|gb|EFF39210.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae F62] Length = 287 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H A G VSW +FA +IF + ++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHY-AGGKSVSWYEFARHIFQTALQQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|163939118|ref|YP_001644002.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis KBAB4] gi|163861315|gb|ABY42374.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis KBAB4] Length = 284 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 154/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAVRPKYSIFQHKMLQLNGFLQMPTWEEGLERFFI 279 >gi|89094079|ref|ZP_01167022.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] gi|89081554|gb|EAR60783.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] Length = 293 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/293 (36%), Positives = 158/293 (53%), Gaps = 12/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFF--LSFSPDVIINP 57 MK L+ G +GQ+ ++++ + Q + V R D+D+ D S + +SP +++N Sbjct: 1 MKILLTGADGQLGSAIAAAVLAQGWSLKAVNRQDVDI---TDRCSVLSNMEWSPQIVVNA 57 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ + AF++N G + + IP I STDYVF G +P E Sbjct: 58 AAYTAVDKAEDDSDAAFAVNELGVQNLVSLCTELNIPIISFSTDYVFSGKQSSPYLESDE 117 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP+ +YG SK AGE + + Y+ +RT+WV+ G NF+ +M+RLA+ E+ VV D Sbjct: 118 PNPIGVYGLSKRAGERVLEASGVPYLNIRTSWVFGEEGHNFVKTMIRLAETHDELKVVSD 177 Query: 178 QFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 Q G PT +A + I ENS S G +H A SW +FAE IF ++ Sbjct: 178 QIGCPTYTGDLAELVTAIVKKYAAENSIPS--GHYHY-AGIEKASWYEFAEEIFTQAKAM 234 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G KV+ + T +YPT+A RP YS + C K+ + S WK G+ +L Sbjct: 235 GLIETAPKVFPVPTDEYPTRAERPTYSVMSCRKVKEVFAVPASDWKAGLSKVL 287 >gi|330972803|gb|EGH72869.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 302 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 107/299 (35%), Positives = 161/299 (53%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHSVSTAYGELSGDLSDLDGLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASEVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPA 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 297 >gi|239998522|ref|ZP_04718446.1| putative reductase [Neisseria gonorrhoeae 35/02] gi|240016086|ref|ZP_04722626.1| putative reductase [Neisseria gonorrhoeae FA6140] gi|240112441|ref|ZP_04726931.1| putative reductase [Neisseria gonorrhoeae MS11] gi|240123021|ref|ZP_04735977.1| putative reductase [Neisseria gonorrhoeae PID332] gi|240127727|ref|ZP_04740388.1| putative reductase [Neisseria gonorrhoeae SK-93-1035] gi|254493244|ref|ZP_05106415.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 1291] gi|268594382|ref|ZP_06128549.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 35/02] gi|268598508|ref|ZP_06132675.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae MS11] gi|268681647|ref|ZP_06148509.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID332] gi|268686117|ref|ZP_06152979.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-93-1035] gi|226512284|gb|EEH61629.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 1291] gi|268547771|gb|EEZ43189.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 35/02] gi|268582639|gb|EEZ47315.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae MS11] gi|268621931|gb|EEZ54331.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID332] gi|268626401|gb|EEZ58801.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-93-1035] Length = 287 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 112/292 (38%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPHQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII+ L++ S+ +RGI+H A G VSW +FA +IF + ++ Sbjct: 181 CPTYAGDLSAAIIR----LLQQSN-PVRGIYHY-AGGKSVSWYEFARHIFQTALQQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|229154887|ref|ZP_04283001.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 4342] gi|228628445|gb|EEK85158.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 4342] Length = 284 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPVP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VDVLPLSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|288928011|ref|ZP_06421858.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 317 str. F0108] gi|288330845|gb|EFC69429.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 317 str. F0108] Length = 282 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + Q + ++D+ F + D I+N A Sbjct: 1 MNILITGCNGQLGNEIQLLQAQYAQHTWFNTDVNELDITDKAAIERFVEANEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE +P++A +NA+ +A+A G + +STDYVF+G TP E Sbjct: 61 AYTAVDKAESDPQLARKLNADAPAFLAEAVAKRGGWMVQVSTDYVFNGTKHTPYVETDEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG++KL GE+ V+ N +I+RTAW+YS FG+NF+ +M+RL +ER ++ V+ DQ Sbjct: 121 CPNSIYGQTKLEGEQAVSKLCPNAMIIRTAWLYSEFGNNFVKTMIRLGREREQLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I+ G++H + + G SW DF + I + G Sbjct: 181 VGTPTYAHDLATAIMTAIDKGIK------PGVYHFSNE-GVTSWYDFTKSIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YPT A RPAYS LD +K+ + + I I W+E + + + Sbjct: 231 NTCQVSPLHTAEYPTPACRPAYSVLDKTKIKDAYGIEIPHWEESLAKCIAKL 282 >gi|119503618|ref|ZP_01625701.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2080] gi|119460680|gb|EAW41772.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2080] Length = 292 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 115/291 (39%), Positives = 155/291 (53%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G GQ+ Q L C + + I + R +D+ P A P +IN AA+T Sbjct: 3 KALVCGAGGQLGQELVLTCPEQCQAIPMTRSMLDIADPTQVAKALDDAEPTWVINAAAFT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE EPE+A +NA+G +A I +++STD+VFDG P ++ NPL Sbjct: 63 AVDAAESEPELAHYVNAKGPEVLALQCRERNIRFLHVSTDFVFDGTQGHPYAPYTEPNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SKL GE V + + VILRT WVYS G NF+ +MLRL ER ++SVV DQ GT Sbjct: 123 GVYGRSKLDGESAVVAAGGSPVILRTGWVYSRHGGNFVKTMLRLIAEREQLSVVEDQIGT 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GP 239 PT AR + L ++ D S GI+H + D G SW DFA I + E G Sbjct: 183 PT----WARGLALACWGLADHGDAS--GIYHWS-DAGACSWYDFAAAIRDIALELGLLRQ 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I QYPT A RPAYS LD + N W +R +L+++ Sbjct: 236 AATLLPIPASQYPTPAQRPAYSVLDKTLTRNLLGHSGHHWTSQLRAMLIDL 286 >gi|228957593|ref|ZP_04119344.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802092|gb|EEM48958.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 284 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 154/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK GE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYTGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|16125392|ref|NP_419956.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|221234135|ref|YP_002516571.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] gi|13422456|gb|AAK23124.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|220963307|gb|ACL94663.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] Length = 300 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 114/288 (39%), Positives = 153/288 (53%), Gaps = 3/288 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ L D ++ R +DL + F + +IN AA+TA Sbjct: 8 LVTGGAGQVGLELLGAAWPDGIVLHAPSRAALDLTNETSIRAAFEARPFAAVINSAAWTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E AF+ NA G +A+ + G+P I +STDYVFDG P E P P+ Sbjct: 68 VDKAESEVAAAFAANAIGPALLAEVTRARGVPLIQVSTDYVFDGDKPGPYTEDDPVGPIG 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG SKLAGE V V+LRTAWV S +NFL +MLRLA +R + VV DQ G P Sbjct: 128 IYGASKLAGEMAVRLGNPRSVVLRTAWVLSAHRANFLKTMLRLAADRPVVRVVEDQLGCP 187 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TSA IA A+ I +I + G++H + G SWAD A IF S GG +++ Sbjct: 188 TSARDIAEALQTITLGMIADPQAP-NGVYHFV-NSGEASWADLAREIFRLSHAHGGVHAE 245 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + +YPT A RP S L +++A + I W E V +I+ ++ Sbjct: 246 VEGIPSSEYPTPARRPRNSRLLTNRIAADYAIHPRPWTEAVADIIADL 293 >gi|301052862|ref|YP_003791073.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis CI] gi|300375031|gb|ADK03935.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus biovar anthracis str. CI] Length = 284 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDFAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKCAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|73667781|ref|YP_303796.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina barkeri str. Fusaro] gi|72394943|gb|AAZ69216.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina barkeri str. Fusaro] Length = 270 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 97/287 (33%), Positives = 154/287 (53%), Gaps = 27/287 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L+IG +G + + C +++ D+D+ + +P+++IN AAY Sbjct: 6 IKTLIIGADGMLGYDI---CKVYPNAVKLTHKDVDITDREQVLESIRKINPNLVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+ ED E+A +N G G IA+A +G I+ STDYVFDG + I+ +P +P Sbjct: 63 TDVEGCEDHQELALKVNGYGPGYIAEACSEVGAALIHFSTDYVFDGSKKEYIESDTPVDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKL GE+K+ N+Y I+R +W++ G NF+ +MLRL+ E ++ VV DQFG Sbjct: 123 INVYGRSKLLGEQKITENLNDYRIIRISWLFGTHGKNFVETMLRLSGEMDQVKVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I++IA GI+H+T + G SW +FA + Sbjct: 183 KPTYTVDLANKIMEIAE--------LGAGIYHVTNE-GICSWYEFASAVI---------- 223 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S ++++P KA RP YS L NT + WKE +++ L Sbjct: 224 SNTIPCTSEEFPMKARRPKYSV-----LVNTKTKPMRHWKEALKDYL 265 >gi|319957144|ref|YP_004168407.1| dtdp-4-dehydrorhamnose reductase [Nitratifractor salsuginis DSM 16511] gi|319419548|gb|ADV46658.1| dTDP-4-dehydrorhamnose reductase [Nitratifractor salsuginis DSM 16511] Length = 288 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 113/287 (39%), Positives = 157/287 (54%), Gaps = 11/287 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + + I +I D+ + F S S D IIN AAYT Sbjct: 4 VLVTGANGQLGSEIRELSSLFPYIYFFTDQNILDITDKEQITQFVKSNSIDTIINCAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE++ A +N +A+ A I ++ISTDYVFDG + TP E TNP Sbjct: 64 AVDKAEEDKINADKVNHLAVRYLAEIAKEEDIKLLHISTDYVFDGKNYTPYTEEDRTNPN 123 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG +KLAGEE + N +I+RT+WVYS +G+NF+ +MLRL KE++++ V+ DQ G Sbjct: 124 GVYGATKLAGEEAMRDINPKNSIIIRTSWVYSGYGANFVKTMLRLGKEKKDLGVIFDQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A+ I+ I N IEN I+H + + G VSW DFA+ I Sbjct: 184 SPTYAKDLAKTILSILPN-IENEKVE---IYHYSNE-GVVSWYDFAKEIM----RMAKLD 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I TK+YPT A RP YS L+ SK+ + I WK+ + L Sbjct: 235 CTIKPIETKEYPTPAMRPHYSVLNKSKIKKEFGLTIPYWKDSLDECL 281 >gi|262275863|ref|ZP_06053672.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886] gi|262219671|gb|EEY70987.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886] Length = 326 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 110/307 (35%), Positives = 157/307 (51%), Gaps = 23/307 (7%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+A L + ++ + R +D+ K + + PDVIIN AAYTA Sbjct: 4 VLITGSGGQLAWELKATLPENRSATFLSRKQLDIRDTKAVFNLVKAEQPDVIINAAAYTA 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE A+++N +G +A A + I++STD+VFDG + TP NP+N Sbjct: 64 VDKAETEPETAYAVNDKGCENLALACKEHNVILIHVSTDFVFDGTNSTPYQTDDHPNPIN 123 Query: 123 IYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+KVA I+RTAWVYS+ GSNF+ +MLRL E+ ++++V DQ GT Sbjct: 124 VYGASKLAGEKKVAEILGAQATIIRTAWVYSVHGSNFVKTMLRLMAEKEQLNIVYDQIGT 183 Query: 182 PTSALQIARAIIQIAHNLIENSDTS-------------LR------GIFHMTADGGPVSW 222 PT A +A + + + S LR + H T D G SW Sbjct: 184 PTWAKGLATMMWSLVEKRLSEGKLSAGRKAESPREIMMLRPEYSGTKVIHWT-DAGVASW 242 Query: 223 ADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 DFA I E+G V I + YPT A RP +S +D I W+ Sbjct: 243 YDFALAIQELGIEKGLLKAVIPVRPISSGSYPTPAARPYFSVIDKVAAEKASEIETIHWR 302 Query: 281 EGVRNIL 287 + + ++ Sbjct: 303 KQLSAMM 309 >gi|257092762|ref|YP_003166403.1| dTDP-4-dehydrorhamnose reductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045286|gb|ACV34474.1| dTDP-4-dehydrorhamnose reductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 300 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 12/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-----GRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G GQ+ L +++ + G D A +PDVI+ Sbjct: 1 MKILLFGKRGQVGWELQRSLAPLGQVVALDCEGDGSLCGDFSNLAGLAVCVREVAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+TAVDKAE EP++A +INA +A+ A +G ++ STDYVFDG TP E Sbjct: 61 NAAAHTAVDKAEAEPDLASTINARAPAVLAEEAARLGAWLVHYSTDYVFDGSGETPWLET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL +YG++KLAGE + + ++I RT+WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 DTPAPLGVYGQTKLAGELAIGHRCDKHLIFRTSWVYAARGNNFARTMLRLAAERDHLRVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A +A + + + L G++H+ A GG SW +A ++ ++ Sbjct: 181 ADQIGAPTGAELLADVTAHAIRSARQRPE--LAGLYHLAA-GGETSWHGYARHVVEQARR 237 Query: 236 RGGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V + YP A RPA S LD KL + + + W+ GV +L I Sbjct: 238 AGQPIRVAAEAVEAVPASAYPLPAPRPANSRLDTGKLRSAFALNLPDWQSGVDRMLEEI 296 >gi|254419278|ref|ZP_05033002.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas sp. BAL3] gi|196185455|gb|EDX80431.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas sp. BAL3] Length = 300 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 114/288 (39%), Positives = 152/288 (52%), Gaps = 3/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ L + + ++ R ++DL + F + +IN A Sbjct: 5 VHILITGGAGQVGLELQAAAWPEGVVLHAPMRDELDLSDAASVRAAFAAARFAAVINSGA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAE E AF+ NA G +A A GIP I +STDYVFDG P E P Sbjct: 65 HTAVDKAETEVAAAFAANAMGPAVLADATREAGIPLIQVSTDYVFDGSKPVPYVETDPVG 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL YG SKLAGE V + V+LRTAWV S +NFL +MLRLA +R + VV DQ Sbjct: 125 PLGAYGASKLAGELAVRAGNPRSVVLRTAWVLSAHRANFLKTMLRLAADRPALRVVGDQH 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA +A A+ IA +I ++D G++H + G +WA A IF SA GGP Sbjct: 185 GCPTSARDVAAALKTIALKMIADADAPT-GVYHFV-NAGETTWAGLAGEIFALSAATGGP 242 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I + YPT A RP+ S L +KL + I W+ V I+ Sbjct: 243 SATVEAIPSSDYPTPAKRPSNSRLSTAKLIRDYGIAPRPWQAAVAEIV 290 >gi|196037397|ref|ZP_03104708.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus NVH0597-99] gi|196031639|gb|EDX70235.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus NVH0597-99] Length = 284 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE + ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKDRDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|229160278|ref|ZP_04288277.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus R309803] gi|228623239|gb|EEK80066.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus R309803] Length = 284 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L +V +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEVYDIYPFDKKLLDVTNISRIQQVVQEIHPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAIASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M++L KER EI VV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIIRTSWLYGKYGNNFVKTMIQLGKEREEIPVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVIINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTNSK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VKVLPVSTEEFGSAAARPKYSVFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|325836668|ref|ZP_08166211.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1] gi|325491193|gb|EGC93481.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1] Length = 284 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+NG + L + D E+I + + D D+ ++PDV+I+PAA Sbjct: 1 MKILITGSNGMLGTDLCEVFKNNDFEVIPMTQNDFDITNLNQTIEKIKEYNPDVVIHPAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD E+ ++A+ IN+ GA +A A I +YISTDYVFDG S TP EF + Sbjct: 61 YTNVDACEENIDLAYQINSIGARNVALACKEIDAAMVYISTDYVFDGTSSTPYKEFDVAS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSKLAGE V + Y I+RTAW+Y G NF+ +M+ LA + ++ VV DQ Sbjct: 121 PQSIYGKSKLAGENYVRDILSKYYIVRTAWLYGKNGKNFVTTMIDLASKMPQLKVVNDQN 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT ++ AI Q+ G++H+ ++ P +W F + IF + G Sbjct: 181 GCPTYTKDLSEAIAQLIKK-------PAYGVYHL-SNSEPTTWYGFTQEIFTQC----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V T ++P A RPAYS LD + + W+E + + L I Sbjct: 229 GTPVVPCTTDEFPRPAKRPAYSVLDNCSWRLEGFMPLRPWQEALTDYLKEI 279 >gi|225025749|ref|ZP_03714941.1| hypothetical protein EIKCOROL_02653 [Eikenella corrodens ATCC 23834] gi|224941530|gb|EEG22739.1| hypothetical protein EIKCOROL_02653 [Eikenella corrodens ATCC 23834] Length = 290 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 117/292 (40%), Positives = 166/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G++GQ+ Q+L + ++ R ++D+ P VIIN AA Sbjct: 1 MKLLITGHHGQVGQALIQQAAAHNFQVAAYDRSELDIANRAAVLQTVEREQPAVIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP A++ NAEGA +A+AA ++G ++ISTDYVF+G + P E + Sbjct: 61 YTAVDKAESEPAAAYAANAEGADNLARAAHAVGAAILHISTDYVFNGRTERPYLETDTPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKL GE+ V + ++ILRTAWV+ G NF+ +MLRL +ER + VV DQ Sbjct: 121 PQTIYGRSKLVGEQAVQADCPRHIILRTAWVFGEHGHNFVKTMLRLGRERDSLGVVADQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG- 237 G PT A IA +++ IA ++ G++H + G P +W FA IF +AE+G Sbjct: 181 GAPTYAGHIAASLLYIAGRT--QTENCPYGLYHFS--GSPYTTWHGFAAEIFRRAAEQGI 236 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P ++ I T YPT A RPA S LDCSK+ I S W+ + N+ Sbjct: 237 LLRSP--ELRAITTADYPTPARRPADSRLDCSKIHTAFGITPSDWQSALGNL 286 >gi|225863171|ref|YP_002748549.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB102] gi|225785930|gb|ACO26147.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB102] Length = 284 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++ + INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLTYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFI 279 >gi|301310888|ref|ZP_07216817.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|300830951|gb|EFK61592.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 287 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 13/290 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + Q + +D+ + + L ++N AAYT Sbjct: 5 LVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E T P+ Sbjct: 65 AVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDATCPV 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + DQ GT Sbjct: 125 SVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFDQVGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A A++ + +E ++ + GI+H + D G SW DF I + G Sbjct: 185 PTYAGDLAVAMLTV----LERAEAGKFIPGIYHFS-DEGVCSWYDFTVKIL----QIAGM 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I TK YPT A RP YS L+ K+ +++ + I W+ + + N Sbjct: 236 NNRVIPIETKDYPTPASRPHYSVLNKGKIKSSYGLTIPHWETSLAYCMNN 285 >gi|260448860|gb|ACX39282.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli DH1] gi|315136674|dbj|BAJ43833.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli DH1] Length = 285 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 103/256 (40%), Positives = 139/256 (54%), Gaps = 7/256 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I V D D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVAS-GTTTWYDYAALVFEEARKA 237 Query: 237 GGPYSKVYRIFTKQYP 252 G P +Q P Sbjct: 238 GIPLHSTSSTQYQQQP 253 >gi|170726038|ref|YP_001760064.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] gi|169811385|gb|ACA85969.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] Length = 307 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/272 (36%), Positives = 158/272 (58%), Gaps = 16/272 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K LVIG +GQ+A L+ DVE+ + R +IDL +P D + P++IIN + + Sbjct: 20 VKVLVIGKHGQLALELADTVPTDVELTCLSRTEIDLTEPSDINRVISTIKPNIIINVSGF 79 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+ AE E A+++N + IA AA + + I+ISTD++FDG S+ P NP Sbjct: 80 TDVEAAESSYENAYALNGKAVDNIASAAFNAKVRFIHISTDFIFDGSSQRPYTVDDKPNP 139 Query: 121 LNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG+SKLAGE +A Y ++N+ I+RT+W+YS FG NF+ +ML L E+ ++++V DQ Sbjct: 140 INVYGQSKLAGEVAIAKYHSDNFTIVRTSWLYSRFGKNFVKTMLNLMSEKEQLNIVNDQL 199 Query: 180 GTPTSALQIAR---AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 G+PT A +A +I++ + I+H + D G SW +FA I + Sbjct: 200 GSPTHAKGLAHFLWCLIKLE---------KWQAIYHWS-DLGITSWYEFAIAIQELGIKH 249 Query: 237 GGPYSK--VYRIFTKQYPTKAHRPAYSCLDCS 266 G + + I + YP+ A RP++S LDC+ Sbjct: 250 GLLQYQIPIKPILSVNYPSLAKRPSFSALDCT 281 >gi|34541217|ref|NP_905696.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis W83] gi|188994412|ref|YP_001928664.1| putative dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis ATCC 33277] gi|34397533|gb|AAQ66595.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis W83] gi|47080241|dbj|BAD18850.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis] gi|188594092|dbj|BAG33067.1| putative dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis ATCC 33277] Length = 285 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 109/282 (38%), Positives = 153/282 (54%), Gaps = 8/282 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G +GQ+ L + D + ++D+ F +S +IIN AAYT Sbjct: 3 RILVTGADGQLGSELRLLASADSRFVFTDLAELDIRDKDAVLRFMEEYSIGIIINCAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ A +N + A +A AA I+ISTDYVFDG + P E PT PL Sbjct: 63 AVDKAEDDEASAEKVNHQAAAHLAAAAAKYDALLIHISTDYVFDGTANIPYREDIPTAPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KL GE+ V + Y+ILRT+W+YS FG+NF+ +MLRL ER ++VV DQ GT Sbjct: 123 GAYGRTKLKGEQAVLAADCRYMILRTSWLYSSFGNNFVKTMLRLTAERDTLNVVFDQVGT 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A I H L G++H + + G SW DFA I S G Sbjct: 183 PTYAADLAAFI----HRLAIGQLPVKTGLYHFSNE-GVCSWFDFAVAIARMS---GHTAC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++ + +YPT+ RP YS LD + + NT +I I W++ + Sbjct: 235 RISPCHSDEYPTRVRRPHYSVLDKTLIKNTFDISIPHWQDSL 276 >gi|167628911|ref|YP_001679410.1| dtdp-4-dehydrorhamnose reductase [Heliobacterium modesticaldum Ice1] gi|167591651|gb|ABZ83399.1| dtdp-4-dehydrorhamnose reductase [Heliobacterium modesticaldum Ice1] Length = 311 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 110/295 (37%), Positives = 158/295 (53%), Gaps = 9/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G NGQ+A L + +G ++D+ + PD ++N AAY Sbjct: 10 LTLLITGANGQVAYDLLRRLPSHYHWVALGSNELDIRDSQQVHQRIRQIWPDWVVNLAAY 69 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-----IYISTDYVFDGLSRTPIDEF 115 T VD AE E E A+++N G +A+A + +++STD+VFDG +P Sbjct: 70 TKVDLAEKEAETAYAVNMRGVEHLARALAAQRAATGKGWLLHVSTDFVFDGCHSSPYHPE 129 Query: 116 SPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +P ++YG SK GE V + ++ILRTAWVY + G NF+ ++LRL ER E+ V Sbjct: 130 HPISPKSVYGDSKAKGEALVREWLPEAHIILRTAWVYGVHGHNFVKTILRLMSEREEVRV 189 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWES 233 V DQ GTPT + +A I+ I +++ SL G +H T D G VSW DFA I E+ Sbjct: 190 VADQVGTPTWSGALADVILSIIRQVVDRQKCQSLAGTYHFT-DAGAVSWYDFAVAIAEEA 248 Query: 234 AERGGPY-SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A G P +KV I T YPT A RPAYS LD + +I+ W+E +R +L Sbjct: 249 AAMGYPVRAKVLPIRTVDYPTPAQRPAYSVLDKTDTWRIFSIQPVHWREHLRKML 303 >gi|270293544|ref|ZP_06199746.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] gi|270275011|gb|EFA20871.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] Length = 284 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ + ++D+ + F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSKENGQHAYFFTDVQELDICDEQAVHGFVKDNRIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E +N G +A AA++ G I +STDYVFDG TP E + T Sbjct: 61 AYTAVDKAEDNQEFCDKLNHVAPGYLAAAAEACGAALIQVSTDYVFDGTGHTPYTEEAAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + + +I+RTAW+YSI+G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLAGEQAVMKHCSRAMIIRTAWLYSIYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAVNRGI------VPGIYHFSNE-GVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD +K+ T I I W+ + + N+ Sbjct: 231 KTCKVSPLHTDEFPAKAPRPHYSVLDKTKIKKTFGIDIPHWEASLAVCMKNL 282 >gi|258517198|ref|YP_003193420.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] gi|257780903|gb|ACV64797.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] Length = 461 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 152/288 (52%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K LV G GQ+ + + + +E I V R D D+ + ++ PDV+I+ AA Sbjct: 183 IKVLVTGVEGQLGYDVVKRLNLLGIENIGVDRTDFDITDKEQTEAYIFDCKPDVVIHCAA 242 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE+E + ++IN +G I++A I +YISTDYVFDG E PT Sbjct: 243 YTAVDKAEEEQGLCYAINVDGTRYISEACKKIDAKMLYISTDYVFDGEGTEAQKEDKPTA 302 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG SK GE V Y I+RT+WVY G+NF+ +ML+L + + EISVV DQ Sbjct: 303 PANYYGYSKEQGELLVKELLEKYFIIRTSWVYGKNGNNFVKTMLKLGQTKDEISVVNDQV 362 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A +I + T+ G +H+ + G SW +F IF ++ G Sbjct: 363 GVPTYTPDLAVSICDMLQ-------TTKYGTYHVVNE-GYCSWYEFVVEIF----KQAGI 410 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T +YPT+A RP S L KL R+ WK+ ++ L Sbjct: 411 NIKVNSIPTSEYPTRAKRPLNSRLSKEKLDKNGFNRLPEWKDALKRYL 458 >gi|228984393|ref|ZP_04144572.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775362|gb|EEM23749.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 284 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPVP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER +SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREGVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|160935033|ref|ZP_02082419.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753] gi|156866486|gb|EDO59858.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753] Length = 295 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 156/303 (51%), Gaps = 24/303 (7%) Query: 1 MKCLVIGNNGQIAQSLSSM-------------CVQDVEIIRVGRPDIDLLKPKDFASFFL 47 M LV G GQ+ L + C D ++ + D+D+ + ++ Sbjct: 1 MNVLVTGCKGQLGNELYKIITEKKSELGEIPQCFHDCKLTCIDVEDLDITDLEAVQAYTR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P+V+IN AAYT V+ E + + AF +NA G +A A + G +++STDYVF G Sbjct: 61 TLRPEVVINCAAYTNVNGCESDRDAAFRVNALGPRNLAVACEETGAKLVHVSTDYVFPGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P ++YG++K GE+ V + + Y I+RTAW+Y G+NF+ +M RL Sbjct: 121 GTEPYVEWDLCGPQSVYGRTKYLGEQYVRDFCSRYFIVRTAWLYGYVGNNFVKTMRRLGT 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ GTPT+A +AH+L++ + T G++H T +G SW +F + Sbjct: 181 EKGAVKVVSDQVGTPTNA-------ADLAHHLLKLAATCEYGVYHCTGNGPACSWYEFTK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G + V T++YPT A RPAYS LD L T + W+E ++ + Sbjct: 234 KIM----EYSGISAAVTPCTTEEYPTPAKRPAYSVLDNCMLRVTVGDEMRDWQEALKCYI 289 Query: 288 VNI 290 I Sbjct: 290 EKI 292 >gi|124021809|ref|YP_001016116.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] gi|123962095|gb|ABM76851.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] Length = 311 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 110/299 (36%), Positives = 154/299 (51%), Gaps = 13/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ L+ G+ GQ+ Q L C DV ++ R ++L + + PD +IN AY Sbjct: 3 VRVLLTGSKGQLGQELIRSCPSDVALVACDRSQLNLEHADACQAIVETHRPDWVINAGAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP IA +NA+G A+A G + +STD+VFDG TP +P Sbjct: 63 TAVDRAEQEPRIAQVVNADGPKALAVGLARHGGRMLQLSTDFVFDGQQGTPYHPQQCVSP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSMLRLAKER----REISVV 175 L +YG SK AGEE V + + +LRT+W+Y GSNFL +MLRL + + ++VV Sbjct: 123 LGVYGASKAAGEEHVLNVLGDRAHVLRTSWLYGPVGSNFLRTMLRLHQSKAAAGEPLAVV 182 Query: 176 CDQFGTPTSALQIARA---IIQIAHNLIEN--SDTSLRGIFHMTADGGPVSWADFAEYIF 230 DQ G PTS L +A A +IQ A + + + L I H + D G SW DFA I Sbjct: 183 SDQVGCPTSTLGLAAACWRLIQTASQVQDEWIQEQQLPSILHWS-DAGAASWYDFAVAIG 241 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + V I T YPT A RP+YS LDCS + + W+ + +L Sbjct: 242 ELGVAAGMLQHAADVKPITTADYPTPARRPSYSLLDCSGSSAALGLEPMYWRNELEGVL 300 >gi|209883705|ref|YP_002287562.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5] gi|209871901|gb|ACI91697.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5] Length = 303 Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 9/296 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ +L S ++ R DL + P++I+N AAYT Sbjct: 5 RILLLGAGGQVGAALQSRLASQGQLTAHDRTSCDLGDLDRLRDAVRAARPNLIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E + INA+ +A+ A + G I+ STDYVFDG T E T PL Sbjct: 65 AVDKAETETALCERINADAPRILAEEARATGAWLIHYSTDYVFDGTKPTAYTENDATAPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAG+ + ++ ILR +WVY + G NF ++LRLA E+ E+ +V DQFG Sbjct: 125 NVYGRTKLAGDRAIMDTATDFTILRVSWVYGVRGRNFANTILRLAAEKDELRIVADQFGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSD----TSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PTSA IA I I D + RG+F++ A G +W +A + E+ +G Sbjct: 185 PTSADLIADTTAGIVRQHIFTKDPAKAAAARGLFNL-APAGRATWHSYALALVREARRQG 243 Query: 238 GPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I QYPT A RP S LD K+ + W++ +++ + + Sbjct: 244 RPLKLSEENILPIPAAQYPTPAKRPQNSMLDTGKIRRLLGHDLPDWQQPLKDFIAH 299 >gi|228474074|ref|ZP_04058815.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga gingivalis ATCC 33624] gi|228274588|gb|EEK13429.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga gingivalis ATCC 33624] Length = 289 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 155/288 (53%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G +GQ+A + V I + ++D+ +FF +++IN AAYT Sbjct: 5 LVTGASGQLALEIKQELHNSVSNHYIFTTKNELDVTDAAAIKAFFKKNEIELVINCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ +E + E A +N IA A G CI++STDYVF G TP E T+PL Sbjct: 65 NVNGSEIDKETANLVNHLAVKNIANACTEQGSACIHLSTDYVFAGEKNTPYTETDATSPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KL GE + +++ILRT+W+YS FG+NF+ ++LRL+KER+EI VV DQ T Sbjct: 125 GAYGQTKLLGESALQHSDIDFLILRTSWLYSAFGNNFVKNILRLSKERKEIKVVFDQVST 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +AR II + IEN R + ++ G SW DFA E+ G Sbjct: 185 PTYAKDLARFIIFV----IENKLYRGRQDVYHFSNEGVCSWFDFA----VETLRLAGSDC 236 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV T ++PT A RPAYS LD SK+ N I W++ + ++ N Sbjct: 237 KVIPCKTHEFPTPAARPAYSVLDKSKIKTDFNFPIPYWRDSLIALMTN 284 >gi|294675731|ref|YP_003576346.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter capsulatus SB 1003] gi|294474551|gb|ADE83939.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter capsulatus SB 1003] Length = 282 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 152/290 (52%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L Q + GR DL P+ A+ + +IN AA+ Sbjct: 1 MKVLVFGRTGQVATELQRQLPQARFL---GREQADLADPEACAAAIRDSDAEAVINAAAW 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A +N A+A+A + GIP +++STDYVF G P E P P Sbjct: 58 TAVDKAETEEAAATVVNGAAPAAMARACAARGIPFLHVSTDYVFSGAGSAPWVETDPVAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGE+ V + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 118 QNAYGRSKLAGEQGVRAAGGAAAILRTSWVFSAHGANFVKTMLRLSESRDALNVVEDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A+I + E+ + ++A VSWADFA IF G Sbjct: 178 GPTPAADIAAALIV---DGAEDGRRTSPAAPIISAASPWVSWADFAREIF----ALAGRK 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S +DC+ LA I W+ G+ +L + Sbjct: 231 VAVTGIPTAAYPTPALRPLNSRMDCAALARDFGIAAPDWQAGLSKVLKEL 280 >gi|221200996|ref|ZP_03574036.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221206552|ref|ZP_03579565.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221173861|gb|EEE06295.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221178846|gb|EEE11253.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 303 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 147/288 (51%), Gaps = 14/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTAV Sbjct: 10 LLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + +A +NAE +A+ A IG I+ STDYVF G P E +P N+ Sbjct: 70 DQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKAGPYVEDDAVDPQNV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E++VV DQ G PT Sbjct: 130 YGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELNVVADQIGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSLR--------GIFHMTADGGPVSWADFAEYIFWESAE 235 + IA AH + + +R GI+H+ A G SW FAE IF + Sbjct: 190 WSNTIA---TLTAHVVAQAISAPMRDEWWHAHSGIYHLCA-AGSTSWHGFAEAIFRLADL 245 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P V I YPT A RPA S + +KLA + W+ + Sbjct: 246 AKKP--AVMPIPASAYPTPAKRPANSQMSNAKLAEHFGLHAPHWEAAL 291 >gi|189347268|ref|YP_001943797.1| dTDP-4-dehydrorhamnose reductase [Chlorobium limicola DSM 245] gi|189341415|gb|ACD90818.1| dTDP-4-dehydrorhamnose reductase [Chlorobium limicola DSM 245] Length = 297 Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 153/291 (52%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ S+ V D P++D+ + IIN A Sbjct: 6 MNILVTGGNGQLGSSIRERIVSYPDWRFSFYDLPELDITSEEQVEDAVRRTECGAIINCA 65 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + + A+ +N +GAG +A A + G ++ISTDYVFDG S P E Sbjct: 66 AYTAVDKAETDHDPAYRVNRDGAGVLAACAKACGALLVHISTDYVFDGSSCRPYTESDTP 125 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG+SKL GE+ + +Y+I+RT+W+YS++G NFL +MLRL ER ++ VV DQ Sbjct: 126 APLGVYGRSKLEGEQLIREIAPSYLIIRTSWLYSLYGQNFLKTMLRLGAERDQLDVVFDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I G++H + + G SW DFA I + Sbjct: 186 AGTPTCADDLADAILAILAK--AEPGKQYAGLYHYSNE-GVCSWYDFATAIM---RLKQF 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P +V I + YPT A RPAYS L+ + + I W + + + L Sbjct: 240 P-CRVRPIESSGYPTPAPRPAYSVLNKGAIKTDWGLDIPHWYDTLADCLTT 289 >gi|170734749|ref|YP_001773863.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169820787|gb|ACA95368.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 104/243 (42%), Positives = 142/243 (58%), Gaps = 11/243 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++IN A +TAVD+AE EP+ A+ N +G +A A + GIP +++STDYVFDG +P Sbjct: 52 LVINAAGWTAVDRAEAEPDAAWRANRDGPAVLADACAARGIPLLHLSTDYVFDGRLPSPY 111 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + PL +YG+SKLAGEE V + ++ILR AWV+ G NF+ +MLRLA+ER Sbjct: 112 AETAAVAPLGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGGNFVRTMLRLARERDV 171 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPV-SWADFAEYI 229 + VV DQ+G PT A IA A++ IA + +LR G +H+ G PV +W FAE I Sbjct: 172 VGVVADQYGGPTHAGAIADALLTIAARY--RAGEALRWGTYHLC--GTPVTTWHGFAETI 227 Query: 230 FWESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 F E A R G + V I T YP A RPA S LDCS L + +W G+ ++ Sbjct: 228 FTE-ARRSGLIDRVPWVRPIRTDAYPLPAPRPANSALDCSLLREHFGVESPSWIAGLTDV 286 Query: 287 LVN 289 Sbjct: 287 FAT 289 >gi|229195518|ref|ZP_04322286.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293] gi|228588058|gb|EEK46108.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293] Length = 284 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ + +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVEAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPLSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|107021950|ref|YP_620277.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116688897|ref|YP_834520.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105892139|gb|ABF75304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116646986|gb|ABK07627.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 299 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 144/284 (50%), Gaps = 7/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL S P +I+NPAAYTAV Sbjct: 13 LVTGVNGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRVRSVVRELKPSIIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE + + A +N E A A+ A +G ++ STDYVFDG E TNP N+ Sbjct: 73 DKAETDVDAARRLNVEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQNV 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G PT Sbjct: 133 YGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAPT 192 Query: 184 SALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA A I + D G++H T+ G SW FAE IF ++ P Sbjct: 193 WSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQAMGERAP 251 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V I YP A RP+ S L KL +R+ W + + Sbjct: 252 --RVLPIPASDYPVPAKRPSNSRLSHDKLTEAFGLRLPDWADAL 293 >gi|229010612|ref|ZP_04167813.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides DSM 2048] gi|229166162|ref|ZP_04293922.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH621] gi|228617260|gb|EEK74325.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH621] gi|228750656|gb|EEM00481.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides DSM 2048] Length = 284 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNMMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS + L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPTWEEGLERFFI 279 >gi|229171965|ref|ZP_04299530.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus MM3] gi|228611308|gb|EEK68565.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus MM3] Length = 284 Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRMQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF +P Sbjct: 64 TKVDHAEKEQDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INVYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERAELSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF ++ + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSDANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ + A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|154505979|ref|ZP_02042717.1| hypothetical protein RUMGNA_03521 [Ruminococcus gnavus ATCC 29149] gi|153793478|gb|EDN75898.1| hypothetical protein RUMGNA_03521 [Ruminococcus gnavus ATCC 29149] Length = 282 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ ++ + + E + V ++D+ S D +++ AA Sbjct: 1 MRALVTGVKGQLGHDVMNELAKRGYEGVGVDVEEMDITDAAAVDSVIREAKVDSVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFSPT 118 +TAVD AED E+ +NAEG IAK ++ IP IYISTDYVF+G P + + + T Sbjct: 61 WTAVDAAEDNEEMCRKVNAEGTENIAKVCKALDIPMIYISTDYVFEGEGTRPWEPDDNVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLNIYG++K GE+ V + Y I+R AWV+ + G NF+ +ML L + ++VV DQ Sbjct: 121 QPLNIYGQTKYEGEQAVERLLDKYYIVRIAWVFGVNGKNFIKTMLNLGETHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ + + G +H+T +GG ++W +FA+ IF + G Sbjct: 181 VGTPTYTYDLARLLVDML-------EKDAYGKYHVTNEGGYITWYEFAKEIF----AQAG 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + ++P KA RP S +D SKL + TW++ ++ L I Sbjct: 230 MDVNVVPVTSDKFPAKAKRPHNSRMDKSKLKKNGFTPLPTWQDALKRYLSEI 281 >gi|324325336|gb|ADY20596.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 284 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 157/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF +P Sbjct: 64 TKVDHAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KE+ EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEKDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVADLNTMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 279 >gi|34863496|gb|AAQ82926.1| dTDP-4-keto-L-rhamnose reductase [Raoultella terrigena] Length = 296 Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 155/298 (52%), Gaps = 13/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L E++ V D DL A PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGEVVAVDYFDKELCGDLTDLAGIAQTVRQVKPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N G +A+ + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNERGVAVLAEESAKLGALMVHYSTDYVFDGEGEHYRPEDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE +A ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALAQANPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIIN 180 Query: 177 DQFGTPTSALQIAR-AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A +A I I L + ++ G +H+ A G SW D+A ++F + A Sbjct: 181 DQHGAPTGAELLADCTAIAIREEL---RNRAVAGTYHLVAS-GETSWYDYARFVF-DVAR 235 Query: 236 RGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V I T YPT A RP S L K + + W++GV ++V + Sbjct: 236 ANGVLLAIKEVNGIPTTAYPTPAKRPLNSRLSNEKFQRVFGVTLPGWRQGVERVVVEV 293 >gi|454899|emb|CAA50768.1| rfbA [Shigella flexneri] Length = 300 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 110/298 (36%), Positives = 157/298 (52%), Gaps = 18/298 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AI KAA+ +G I+ STDYVF G T E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIIKAANEVGAWVIHYSTDYVFPGNGDTAWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG +KLA + + + ++I RT+WVY+ G+NF +MLRLAK+R ++V+ Sbjct: 121 ATAPLNVYGGTKLAWGKALQDHCGKHLIFRTSWVYAGKGNNFAKTMLRLAKDRETLAVIT 180 Query: 177 DQFGTPTSALQI----ARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 DQFG PT AL + R I +A N E + G++H+ A GG +W D+ +F + Sbjct: 181 DQFGAPTGALDLLADCTRHAIWLAANKPE-----VAGLYHLVA-GGTTTWHDYPALVF-K 233 Query: 233 SAERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A R G P +K+ + T YPT A P L+ K + + W+ GV+ +L Sbjct: 234 EARRAGFNLPLNKLNAVPTTAYPTPARGPHNFRLNTEKFQQNFALVLPDWQVGVKRML 291 >gi|310829415|ref|YP_003961772.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] gi|308741149|gb|ADO38809.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] Length = 287 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+NGQ+ + L + C + +E + P++D+ K S SPD+IIN AA Sbjct: 1 MKILITGSNGQLGRQLITECKKRSIEYVGYDVPELDITNIKLVQSVVEKESPDIIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS------RTPID 113 T VD E ++AF++NA G +A+ + + I +++STDYVFDG + P Sbjct: 61 LTDVDGCERNAKLAFAVNAYGPKNLAEISKNKDILLVHLSTDYVFDGQGVFENGHKRPYV 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E TNP +YGKSK AGE+ V T+ Y I+R+AW+Y G+NF+ +MLRLA+ +++ Sbjct: 121 ESDCTNPKTVYGKSKKAGEDFVVDNTSKYFIIRSAWLYGD-GNNFVKTMLRLAENHPQLT 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPTS + +ARAII++ T+ GI+H T + G SW DFA IF Sbjct: 180 VVSDQVGTPTSTVDLARAIIELIQ-------TNAYGIYHGTCE-GQCSWYDFAVAIF--- 228 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ G V + +++Y + RP YS L L + W+E + L Sbjct: 229 -QKSGVKIDVKPVSSEEYASPTPRPHYSVLRNKGLEDLKINVFRPWEEALSEYL 281 >gi|253575949|ref|ZP_04853283.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844743|gb|EES72757.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. oral taxon 786 str. D14] Length = 289 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 162/290 (55%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + ++ R +D+ F PD II+ AA Sbjct: 1 MRVLVTGAKGQLGHDVVHLFENAGHLVLPCDRDSLDITDGAMCLERVQQFKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + + A+++NA G + AA+ + YISTDYVFDG + +P E+ TN Sbjct: 61 YTAVDQAETDVDAAYAVNAVGTRNMVLAAERVKAKFCYISTDYVFDGTNVSPYQEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSK AGE V S ++ + I+RT+WVY + G NF+ +ML+L +E+ ++VV DQ Sbjct: 121 PQSVYGKSKRAGEILVQSLSSTFFIVRTSWVYGLHGQNFVKTMLKLGQEKPILNVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RG 237 G+PT + +A ++++ T GI+H ++ G +W +FA+ IF E++ R Sbjct: 181 GSPTYTVDLATFLLELIQ-------TEKYGIYH-ASNTGECTWFEFAQAIFEEASVILRK 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V T+++P A RP YS LD + + W+EG+++ L Sbjct: 233 HYMAQVEPCTTEEFPRPAQRPRYSVLDHMAIRTNGLQDLRFWREGLKDFL 282 >gi|255033861|ref|YP_003084482.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] gi|254946617|gb|ACT91317.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] Length = 288 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 166/295 (56%), Gaps = 32/295 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP-KDFASFFL---------SFS 50 MK +V+G +GQ+ L + + R D+ P ++FA+ + Sbjct: 1 MKIVVLGASGQLGSCLKKVSTE--------RNLTDISFPSEEFANILDKDLLDQLLATEK 52 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +IN AAYTAVDKAED+ + +N +GA IA+ G +++STD+VF G Sbjct: 53 PQFVINCAAYTAVDKAEDDVDTCRKVNRDGAAYIAEVCRKHGAALVHVSTDFVFKGNVPK 112 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 + E P P NIYG +KL GE +A+ + +RT+W+YS FG+NF+ +MLRL +ER Sbjct: 113 LLSETDPAEPENIYGLTKLEGEAAIAAILPEHYTIRTSWLYSEFGNNFVKTMLRLGRERE 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ V+ DQ G+PT A+ +A I+ I IE+ +TS GI+H + + G SW DFA+ +F Sbjct: 173 QLGVIVDQVGSPTYAIDLATTILDI----IESGNTSY-GIYHYSNE-GVTSWYDFAKAVF 226 Query: 231 --WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 E++ + P + T +Y T+A RPAYS +D SK+ +T I I W++ + Sbjct: 227 DLSETSVKLNP------VKTSEYVTRAVRPAYSVMDKSKIKSTFGISIPYWRDSL 275 >gi|56752003|ref|YP_172704.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechococcus elongatus PCC 6301] gi|81300908|ref|YP_401116.1| dTDP-4-dehydrorhamnose reductase [Synechococcus elongatus PCC 7942] gi|56686962|dbj|BAD80184.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechococcus elongatus PCC 6301] gi|81169789|gb|ABB58129.1| dTDP-4-dehydrorhamnose reductase [Synechococcus elongatus PCC 7942] Length = 289 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 109/294 (37%), Positives = 151/294 (51%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L V++I GR +DL + + PD +IN AY Sbjct: 1 MKVLLTGAAGQVGQALQRSHPDGVDLIACGRQQLDLSDESAIRAAIQTLRPDWVINAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EP +A +IN+ +A++ G + ISTD+VF+G P + P Sbjct: 61 TTVDRAESEPALAIAINSNSVRILAESLAETGGNLLQISTDFVFNGDRNRPYPTDAERQP 120 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L++YG +K A EE + + +I+RTAWVY + G NF+ +MLRL ER ++VV DQ Sbjct: 121 LSVYGTTKAAAEEAILQFLPERSLIVRTAWVYGLGGRNFVTTMLRLMAERDHLTVVWDQV 180 Query: 180 GTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +A A+ Q IA NL+ GI H T D G SW DFA I + E G Sbjct: 181 GTPTWTDSLAAALWQAIAQNLM--------GIHHCT-DAGVASWYDFAVAIQDLALELGL 231 Query: 239 PYSKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RPAYS LDC+ W+ + +L + Sbjct: 232 LQQAVPIAAIPSSDYPTPATRPAYSVLDCADFNRAIGHDPLHWRHALAQMLTQV 285 >gi|256841670|ref|ZP_05547176.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D13] gi|256736564|gb|EEU49892.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D13] Length = 287 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 161/290 (55%), Gaps = 13/290 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ S+ + Q + +D+ + + L ++N AAYT Sbjct: 5 LVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E T P+ Sbjct: 65 AVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDATCPV 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + DQ GT Sbjct: 125 SVYGHTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFDQVGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A A++ + +E ++ + GI+H + D G SW DF I + G Sbjct: 185 PTYAGDLAVAMLTV----LERAEAGKFIPGIYHFS-DEGVCSWYDFTVKIL----QIAGM 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I TK YPT A RP YS L+ K+ +++ + I W+ + + N Sbjct: 236 NNRVIPIETKDYPTPASRPHYSVLNKGKIKSSYGLTIPHWETSLAYCMNN 285 >gi|229101902|ref|ZP_04232616.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28] gi|228681485|gb|EEL35648.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28] Length = 286 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 6 RVIITGANGQLGKQLQEELSPEEYDIYPFDKKLLDVTNISRVQQVVQGIRPHIIIHCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 66 TKVDLAEKEQDLAYLINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHNPAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +GSNF+ +M+RL KE+ EI+VV DQ G Sbjct: 126 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGSNFVKTMMRLGKEKDEITVVADQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + + ++ H TSL G +H++ + G SW +FA+ IF Sbjct: 186 SPTYVADLNMMVNKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIF----SYANMN 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ ++A RP YS + L +++ +W+EG+ + Sbjct: 234 VNVLPVSTEEFGSEAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 281 >gi|298387538|ref|ZP_06997090.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] gi|298259745|gb|EFI02617.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] Length = 259 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 154/269 (57%), Gaps = 12/269 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ ++ ++I+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICNKDAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E+A+ +N+E +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDDSELAYKLNSEAPKTLACAAQFNGAAIIQVSTDYVFDGTAHIPYTEECDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE +V ++ V++RTAW+YS FG+NF+ +M+RL KER + V+ DQ Sbjct: 121 CPNSVYGTTKLEGEYEVLNHCEKSVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I + G++H + + G SW DF I + G Sbjct: 181 VGTPTYANDLAQAIFAIINKGI------VPGVYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 KV + T +YPT+A+RPAYS LD +K Sbjct: 231 TSCKVKPLHTAEYPTRANRPAYSVLDKTK 259 >gi|260162573|dbj|BAI43814.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 103/296 (34%), Positives = 151/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V D DL A PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLDGIAQTVRIVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + D +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETLR--DPALAGTYHLVAS-GETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|302384839|ref|YP_003820661.1| dTDP-4-dehydrorhamnose reductase [Clostridium saccharolyticum WM1] gi|302195467|gb|ADL03038.1| dTDP-4-dehydrorhamnose reductase [Clostridium saccharolyticum WM1] Length = 282 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK V G GQ+ ++ + + E + V ++D+ + +PD +I+ AA Sbjct: 1 MKVFVTGVKGQLGFDVVNELKKRGHEAVGVDIDEMDITDRDSVNLVIQAAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE+ E+ ++NA+G +IAK + IP +YISTDYVF+G P + P Sbjct: 61 YTAVDAAEENEEVCRNVNAKGTESIAKVCRELDIPMMYISTDYVFNGQGTRPWEPDDPRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V Y I+R AWV+ + G NF+ +ML L K +++VV DQ Sbjct: 121 PLNVYGQTKYEGELAVEENLTKYFIVRIAWVFGVNGKNFIKTMLNLGKTHDKLTVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTFDLARLLV----DMIE---TEKYGRYHATNE-GMCTWHEFACEIF----KQAGM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + + QYP KA RPA S ++ KL +R+ +W++ ++ L Sbjct: 229 DVKVEPVSSDQYPAKAKRPANSRMNKDKLEENGFLRLPSWQDALKRYL 276 >gi|229028991|ref|ZP_04185090.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1271] gi|228732271|gb|EEL83154.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1271] Length = 284 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRMQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYGEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + + Sbjct: 184 SPTYVTDLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSNANMK---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFI 279 >gi|148238440|ref|YP_001223827.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7803] gi|147846979|emb|CAK22530.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7803] Length = 295 Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 111/302 (36%), Positives = 155/302 (51%), Gaps = 21/302 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + C +E+I R ++DL P+ ++ P ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIAACPPGIELIATRRAELDLADPQACSAAVHHHRPAWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP +A ++NA A+A+A G + +STD+VF+G P P +P Sbjct: 61 TAVDKAESEPALAQAVNAGAPAALAQALAETGGRMLQLSTDFVFNGAQGQPYQPDQPRDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSIFGSNFLLSMLRLAKERRE---- 171 L +YG +K AGE+ VA + ILRT+WVY G NFLL+MLRL + E Sbjct: 121 LGVYGTTKAAGEQAVAEQLGAHEGGRAAILRTSWVYGAVGRNFLLTMLRLHRRNAEAGQP 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G PT+ +A A IA N L G H + D G SW DFA I Sbjct: 181 LRVVADQVGCPTATPGLAAACWALIAQN--------LSGWQHWS-DAGAASWYDFAVAIG 231 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + RG + V I T QYPT A RPAYS L C+ + W++ + ++ Sbjct: 232 ELAVARGLIPAAAAVQPITTAQYPTPAQRPAYSLLACAATRAQLGLPARHWRQALAEVIA 291 Query: 289 NI 290 + Sbjct: 292 CV 293 >gi|315225456|ref|ZP_07867269.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea F0287] gi|314944554|gb|EFS96590.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea F0287] Length = 280 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 106/282 (37%), Positives = 151/282 (53%), Gaps = 9/282 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G +GQ+ + + + +D+ + +F + VI+N AAY Sbjct: 1 MNVLVTGGSGQLGSEIQANPHKKSCYYFTDINSLDICDVQAIRAFVQLNNIGVIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A IN +A +P I+ISTDYVF G TP E PT P Sbjct: 61 TNVDKAEDDSALATLINHTAVENLATVCKEHNLPLIHISTDYVFGGSKNTPYTETDPTTP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL+ ER E+ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQQAGIEHLIIRTAWLYSLRFGHNFVKTIQRLSAERTELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A I+Q NL R ++H + + G SW DFA I +S G Sbjct: 181 GTPTNASDLADFIVQAVENLWYKGK---REVYHFSNE-GVCSWYDFAVTIVAQS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 KV + ++P+K RPAYS LD +KL N I W+ Sbjct: 233 NCKVLPCRSDEFPSKVTRPAYSVLDKTKLKKDFNYPIPHWRH 274 >gi|167627478|ref|YP_001677978.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597479|gb|ABZ87477.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 301 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 111/301 (36%), Positives = 161/301 (53%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV G+NGQ+ L S + +Q+ I +D+ + F + VI Sbjct: 1 MKILVTGSNGQLGSELKELVFNSKLEIQNYTFIFADSKLLDITDHQAVKKFIVDNDIKVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVDKAE + E+A IN +A+ A I I+ISTDYVF+G S P E Sbjct: 61 INCAAYTAVDKAETDIEMADKINHLAVANMAELAKKYSIKLIHISTDYVFNGESFRPYIE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 NP +IYG +KLAGEE + + +I+RT+WVYS +G+NF+ +MLRL +E+ + Sbjct: 121 SDKANPQSIYGATKLAGEEVIQRINPKDSIIIRTSWVYSSYGNNFVKTMLRLGREKDTLG 180 Query: 174 VVCDQFGTPTSALQIARAII----QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 V+ DQ GTPT A +A+AI+ Q+ + +D + I++ + + G SW DFA+ I Sbjct: 181 VIYDQVGTPTYAKDLAKAILDILSQVDSRVKHENDNEVVEIYNYSNE-GVTSWYDFAKEI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T YPT A RP YS L+ K+ + I WK +++ + Sbjct: 240 M----SIAKIECQVNPIETVDYPTPAKRPHYSLLNKKKIKQDFGLSIPYWKNSLQDCIYR 295 Query: 290 I 290 I Sbjct: 296 I 296 >gi|330961717|gb|EGH61977.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 302 Score = 175 bits (443), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R DL S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVIALDRQTTSTAYGDLTGDLSDLDGLRKTIRSVQP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E +A ++NA + +A+ A ++ ++ STDYVFDG Sbjct: 62 QVIVNAAAYTAVDKAETERALAHTVNALASQVLAEEARTLDALLVHYSTDYVFDGTGSVA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + +N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSAVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ G PTSA +A + + L GI+H+ A G VSW +A+Y+ Sbjct: 182 LSVIADQIGAPTSAELLADIATAALQQTLARPE--LCGIYHL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTTEYPTPARRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 297 >gi|238026394|ref|YP_002910625.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] gi|237875588|gb|ACR27921.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] Length = 301 Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 105/288 (36%), Positives = 150/288 (52%), Gaps = 11/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L+ ++ + R +DL P P +++NPAAYTAV Sbjct: 11 LLTGVNGQVGHELARSLQGLGRVVALDRQALDLADPDAIRRVMRELVPALVVNPAAYTAV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + A +N + A+ A G ++ STDYV+ G E PT P N+ Sbjct: 71 DQAETDVAGATCLNVDAPAVFAEEARRAGAALVHYSTDYVYAGEGEARYAETDPTGPRNV 130 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE+ +A+ ++ILRT+WVY + G NFL +MLRL ER E++VV DQ G PT Sbjct: 131 YGRTKLEGEQAIAASGCRHLILRTSWVYGMRGRNFLRTMLRLGAERSELNVVADQIGAPT 190 Query: 184 SALQIARAIIQIAHNLIE---NSD---TSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + IA I + ++D + G+FH+ A GG SW FAE IF ++ G Sbjct: 191 WSRTIAELTAAILAQSVSPGVSADDWWAAHSGVFHLAA-GGETSWHGFAEAIFEQA---G 246 Query: 238 GPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G R I YPT A RP+ S L KL T + + W+E +R Sbjct: 247 GERRPAVRPIPAASYPTPAARPSNSRLSMDKLERTFGLTVPHWREALR 294 >gi|321313341|ref|YP_004205628.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BSn5] gi|320019615|gb|ADV94601.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BSn5] Length = 283 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 156/287 (54%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ +N GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + RGI+H+ ++ G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKLF--------SHPRGIYHV-SNSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYL 275 >gi|257090457|ref|ZP_05584818.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis CH188] gi|256999269|gb|EEU85789.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis CH188] Length = 280 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E I ++D+ + P+VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYISTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|304383909|ref|ZP_07366366.1| dTDP-4-dehydrorhamnose reductase [Prevotella marshii DSM 16973] gi|304334987|gb|EFM01260.1| dTDP-4-dehydrorhamnose reductase [Prevotella marshii DSM 16973] Length = 284 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + L + + D+ ++D+ P ++ D I+N A Sbjct: 1 MNVLITGCNGQLGRELRLLQKENDDIRWTNADIEELDITDPTAIEAYVDKHRIDSIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE++ E +NA +A+A G I ISTDYVFDG + P E Sbjct: 61 AYTAVDKAEEDAERCRILNALAPEYLARAMAKHGGRLIQISTDYVFDGTAHQPYTETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG++KL+GE + + +++RTAW+YS FG+NF+ +MLRL +ER + VV DQ Sbjct: 121 RPTGVYGQTKLSGERAAIAACPDTIVIRTAWLYSPFGNNFVKTMLRLGRERENLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ + GI+H T +G SW DFA I + Sbjct: 181 IGTPTYAHDLAIAIVAALRKPLPA------GIYHFTNEGA-TSWYDFAVAIHRIARIHT- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V+ + T +YPT A RP YS LD +K+ T I I W++ + + + Sbjct: 233 --CTVHPLHTAEYPTPAQRPFYSLLDKTKIKRTLGIEIRHWEDALNHCI 279 >gi|312901447|ref|ZP_07760722.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0470] gi|312903795|ref|ZP_07762968.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0635] gi|310632869|gb|EFQ16152.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0635] gi|311291436|gb|EFQ69992.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0470] gi|315578164|gb|EFU90355.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0630] Length = 299 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E I ++D+ + P+VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYISTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|167038026|ref|YP_001665604.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116439|ref|YP_004186598.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856860|gb|ABY95268.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929530|gb|ADV80215.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 297 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 153/297 (51%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ + S+ ++ EII V +D+ KD + Sbjct: 1 MKLLITGAKGQLGLQIRSIIERGKSEIGEIDEIYKNAEIIYVSHDKLDITVLKDVLEYIE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VD+ E + + AF +NA G +A AA +G +++STDYVF G Sbjct: 61 KYRPDIIINCAAYTNVDRCESDIDTAFKVNAIGPRNLAIAAQKVGAKLLHVSTDYVFSGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+++YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L AK Sbjct: 121 GSVPFREYDIPQPISVYGKTKLLGEQYVREFCDKYFIVRTAWLYGKYGKNFVYTILNTAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQRGNPTNAEDLAYHILKLVL-------TDEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I E G V I + + A RP YS LD L T R+ W++ ++ Sbjct: 233 KI----VEYAGINCTVVPITSDKINRAAKRPFYSSLDNMMLRCTIGDRMRNWEDALK 285 >gi|322433921|ref|YP_004216133.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] gi|321161648|gb|ADW67353.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] Length = 300 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 21/302 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+ GQ+ +L ++ R ++DL+ P F +P I+NPAAYTAV Sbjct: 3 LLTGSTGQVGSALVQALAPFGRVVAPTRAELDLVHPASVREFVRKVNPRWIVNPAAYTAV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E A+++NAE + + A G I+ STDY+FDG P E P +I Sbjct: 63 DKAESETAQAYAVNAELPRILGEEAAQSGAAVIHFSTDYIFDGEGTLPYTEKDIPAPHSI 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE +A+ ++I RT+WVY G NFLL++L AK R E+ +V DQ G PT Sbjct: 123 YGSTKLEGERALAATGAAHLIFRTSWVYGATGKNFLLTILNAAKARPELRIVADQHGAPT 182 Query: 184 SALQIARAIIQIAHNLIENSDT------------SLRGIFHMTADGGPVSWADFAEYIFW 231 + +AR + ++ I ++T L G++H A G +W FA+ Sbjct: 183 WSRDLAR----LTNHAIARAETLANGRPLPEALQPLSGVYHACA-AGETTWFGFAQAAV- 236 Query: 232 ESAERGGPYSKVYR---IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E ++ P K+ I T +YPT A RPA S +D SKL + W++ + ++L Sbjct: 237 EHEQQRDPAQKLATLTPITTAEYPTPARRPANSRMDTSKLGSLLGFHFPQWQDSLNSVLA 296 Query: 289 NI 290 + Sbjct: 297 EL 298 >gi|170702910|ref|ZP_02893752.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170132190|gb|EDT00676.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 294 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 157/294 (53%), Gaps = 10/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDIADADAVRRALDEHRAALVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A ++GIP I++STDYVFDG E + P Sbjct: 60 TAVDRAETEPDAAWQANRDGPAVLANACAALGIPLIHLSTDYVFDGRMPGAYAETAAVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG+SKLAGEE V + ++ILR AWV+ G+NF+ +MLR+ +ER + VV DQ+ Sbjct: 120 LGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGNNFVRTMLRVGRERDVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-SWADFAEYIFWESAERGG 238 G PT A IA ++ IA +T G +H+ G PV +W FAE IF E A R G Sbjct: 180 GGPTHAGAIADTLLTIAARY-RAGETLHWGTYHLC--GTPVTTWHGFAETIFTE-ARRTG 235 Query: 239 PYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V I T YP A RPA S LDCS+L I +W G+ +L Sbjct: 236 LIDRVPFVRPIRTDAYPLPAPRPANSALDCSRLREHFGIESPSWLAGLTEVLAT 289 >gi|28868295|ref|NP_790914.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato str. DC3000] gi|213967234|ref|ZP_03395383.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato T1] gi|301381030|ref|ZP_07229448.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato Max13] gi|302059361|ref|ZP_07250902.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato K40] gi|302134878|ref|ZP_07260868.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851532|gb|AAO54609.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato str. DC3000] gi|213928076|gb|EEB61622.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato T1] gi|331019592|gb|EGH99648.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 301 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 157/299 (52%), Gaps = 14/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R DL + P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVLGEVVALDRHTASTVYGDLSGDLSSLDGLRNTIRCVKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A + ++ STDYVFDG + Sbjct: 61 QVIVNAAAYTAVDKAETEQELAHTVNALASQVLAEEARQLDALLVHYSTDYVFDGTGTSA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDAVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A + + L GI+H+ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLADIATAALQQTLARPE--LCGIYHL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARAHGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 296 >gi|254788157|ref|YP_003075586.1| dTDP-4-dehydrorhamnose reductase [Teredinibacter turnerae T7901] gi|237687051|gb|ACR14315.1| dTDP-4-dehydrorhamnose reductase [Teredinibacter turnerae T7901] Length = 288 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/272 (40%), Positives = 154/272 (56%), Gaps = 14/272 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+ L+ C VE++ +GR +D+ P IIN AAY Sbjct: 1 MKVLVCGR-GQLGAELARTCPDSVELVHLGRDALDIADAGQVDRVVAELKPAAIINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A + N G +A+AA + G ++ISTD+VFDG + TP +P P Sbjct: 60 TAVDKAETDADAARAGNEVGPANLARAAANNGSYLLHISTDFVFDGTANTPYLPDAPVAP 119 Query: 121 LNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE +A S +++ ILRTAWV+S G+NF+ ++LRLA +R +++++ DQ Sbjct: 120 LGVYGQTKLAGEVAIAESGLSHWAILRTAWVFSALGNNFVKTILRLAADRPKLTIIADQI 179 Query: 180 GTPTSALQIARAI-IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G+PT A +A+ + + H L+GI H T D G SW DFA I A RG Sbjct: 180 GSPTCAKHLAKTCWLAVNHQ--------LQGIHHCTCD-GVASWYDFAMAIQELGAARGL 230 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 + I T+ YPT A RP YS L + L Sbjct: 231 LSGTCDIAPIRTEDYPTPARRPHYSVLSNASL 262 >gi|213962406|ref|ZP_03390669.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno] gi|213955072|gb|EEB66391.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno] Length = 278 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/283 (36%), Positives = 155/283 (54%), Gaps = 11/283 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G NGQ+ + + + +D+ + +F + D+I+N AAY Sbjct: 1 MNVLVTGANGQLGSEIQNNTHRISNYYFSDADSLDITDAQAIRAFVQQHAIDLIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ A +IN +A +P I+ISTDYVF G TP E T P Sbjct: 61 TNVDKAEDDCATAQAINHTAVAHLASVCKEFQLPLIHISTDYVFGGTKNTPYRETDATQP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + + ++I+RT+W+YS+ FG+NF+ ++ RL+ ER ++ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQNSGIEHLIIRTSWLYSLRFGNNFVKTIQRLSSERPQLKVVADQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A I+Q IEN+ R ++H + + G SW DFA I S G Sbjct: 181 GTPTNAADLANFIVQ----AIENAWYRGKREVYHFSNE-GVCSWYDFAVAIVAAS----G 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V + ++P+K RP+YS LD +KL RI W++ Sbjct: 232 NACEVLPCTSAEFPSKVTRPSYSVLDKTKLKTDFGYRIPYWRD 274 >gi|330951114|gb|EGH51374.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae Cit 7] Length = 303 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/300 (35%), Positives = 162/300 (54%), Gaps = 15/300 (5%) Query: 1 MKCLVIGNNGQIAQSLSS--------MCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFS 50 MK L++G NGQ+ L + + + D+ DL + + S Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGQVVALDPRHTVSTAYGDLCGDLSDLESLRNTIRSVK 61 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 PQVIVNAAAYTAVDKAETERELAHTVNALASQVLAEEARTLDALLVHYSTDYVFDGSGDT 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E +P+N YG +KL GE +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 AWKESDAVSPVNYYGATKLEGERLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRP 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 TLNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVI 238 Query: 231 WESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 DLARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 298 >gi|152993301|ref|YP_001359022.1| dTDP-4-dehydrorhamnose reductase [Sulfurovum sp. NBC37-1] gi|151425162|dbj|BAF72665.1| dTDP-4-dehydrorhamnose reductase [Sulfurovum sp. NBC37-1] Length = 288 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G+NGQ+ + ++ ++ +D+ F + D+I+N AAYT V Sbjct: 5 LVTGSNGQLGSEIRALASEENIFYFTDSNALDITDRNAIECFCEENAIDIILNCAAYTDV 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE E + A +N +A+ A + ++ISTDYVFDG + P E T P + Sbjct: 65 DEAEKEMKNADRVNHLAVKYLAEIARMRKMKLVHISTDYVFDGTNCKPYVEEDTTGPNGV 124 Query: 124 YGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KL GEE + +N +I+RT+WVYS FG+NF+ +MLRL ER E+ V+ DQ GTP Sbjct: 125 YGSTKLLGEEVLKMVNPHNAIIIRTSWVYSSFGNNFVKTMLRLGTEREELGVIFDQVGTP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +A+ I+QI IEN + ++H + + G SW D A+ IF E G + Sbjct: 185 TYAGDLAKTILQIVPK-IENENVE---VYHFSNE-GVCSWFDLAKAIF----ELGNVKCE 235 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I TK YPT A RP YS L+ +K+ I I WKE + L I Sbjct: 236 VSPIETKAYPTPAKRPYYSVLNKTKIKTAFGISIPYWKESLGECLKKI 283 >gi|150017437|ref|YP_001309691.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] gi|149903902|gb|ABR34735.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] Length = 293 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/307 (34%), Positives = 166/307 (54%), Gaps = 45/307 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----------------------DLL 37 MK L+ G GQ+ + ++ EII++GR DI +L+ Sbjct: 1 MKILITGAKGQLGREIT-------EIIKIGRADIGEISESIKVSEVIGFDVDRLDITNLV 53 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 K K+ S+ P+V+IN AA T VD+ E + + AF +N+ G +A A DSIG + Sbjct: 54 KVKEVLSYL---KPEVVINCAAATNVDRCEIDEDFAFRVNSIGPRNLAIACDSIGAKLVQ 110 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +STDYVF+ + P+ E+ +P ++YGK+K GE+ V + + I+RTAW+Y GSN Sbjct: 111 VSTDYVFNENTHKPLKEYDLASPSSVYGKTKFLGEQYVQLLCSKHFIVRTAWLYGYVGSN 170 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 F+ ++++L+KE+ I+VV DQ G PT A +A I++ LIE D GI+H T + Sbjct: 171 FVYTIMKLSKEKNYINVVNDQMGNPTYANDLAYHILK----LIETEDY---GIYHCT-NN 222 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 G +W +FA+ I S E +V +++Y T+A RP YS LD + L NT + Sbjct: 223 GECTWYEFAKRIVKLSGEE----CEVRPCTSEEYKTQAKRPKYSSLDNAMLRNTVGDEMR 278 Query: 278 TWKEGVR 284 WK+ + Sbjct: 279 DWKDAIE 285 >gi|256617235|ref|ZP_05474081.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 4200] gi|256596762|gb|EEU15938.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 4200] gi|295113355|emb|CBL31992.1| dTDP-4-dehydrorhamnose reductase [Enterococcus sp. 7L76] Length = 280 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P+VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|307265776|ref|ZP_07547327.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919171|gb|EFN49394.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii Rt8.B1] Length = 298 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 110/304 (36%), Positives = 155/304 (50%), Gaps = 39/304 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP-----------------KDFA 43 M+ L+ G GQ+A L S II GR +I + P D Sbjct: 1 MRLLITGARGQLALQLRS-------IIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLT 53 Query: 44 S---FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 S F + PD+IIN AAYT VDK E + AF +NA G +A AA +G +++ST Sbjct: 54 SVLRFVDEYRPDIIINCAAYTNVDKCESDIGTAFKVNAIGPRNLAMAAQRVGAKLLHVST 113 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 DYVF+G+ P E+ P+N+YGK+KL GE+ V + N Y I+RTAW+Y +G NF+ Sbjct: 114 DYVFNGVGNVPFREYDIPEPINVYGKTKLLGEQYVREFCNRYFIVRTAWLYGKYGRNFVY 173 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 ++L+ AKE+ + VV DQ G PT+A +A I+++ T GI+H T + G Sbjct: 174 TILKAAKEKGYLEVVNDQKGNPTNAEDLAHHILKLVL-------TEEYGIYHCTGN-GEC 225 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 SW DFA I E G V I + + A RP YS LD L T ++ WK Sbjct: 226 SWYDFACKI----VEYAGIDCTVVPITSDKIDRPAKRPFYSSLDNMMLRCTIGDKMRNWK 281 Query: 281 EGVR 284 + ++ Sbjct: 282 DALK 285 >gi|302038313|ref|YP_003798635.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] gi|300606377|emb|CBK42710.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] Length = 283 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 158/288 (54%), Gaps = 17/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ ++ G GQ+ L + +Q ++ + P DL +D + P+V+I+ A+ Sbjct: 1 MRIVITGAQGQLGTDLRQV-LQGHQLTLLDLPTFDLTH-QDCGRVIVEAVPEVVIHAGAH 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE P +A + NAEG +A+AA +G IYISTDYVFDG P E PTNP Sbjct: 59 TDVDGAERNPALAMAANAEGTERVARAAALVGARLIYISTDYVFDGRGTRPYVETDPTNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG+SK AGE++ + N +++RTAW+Y + G NF+ ++L+LA ER + VV DQ G Sbjct: 119 VSAYGESKRAGEQRALACCENTLVVRTAWLYGLHGRNFVKTILQLASERPCLKVVADQRG 178 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + +A I + +AH S RG+ H+T + G +W +FA I S G Sbjct: 179 CPTFSGDLAGMIGKLLAH--------SARGVLHVT-NAGDCTWHEFATEIVRLS----GR 225 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T P A RPAYS L +L + + +W++G++ + Sbjct: 226 PVPVEAITTADMPRPAKRPAYSVLSADRLHHL-GFTMPSWQDGLQRFM 272 >gi|91774152|ref|YP_566844.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM 6242] gi|91713167|gb|ABE53094.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM 6242] Length = 261 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 106/284 (37%), Positives = 152/284 (53%), Gaps = 28/284 (9%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++IG +G + LS + ++ D+D+ + P V+IN AAYT V Sbjct: 1 MIIGASGMLGSDLSRAFP---DAVKFTHHDLDITNKQQVLKKIEEIKPYVVINAAAYTNV 57 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D EDE +IAF +N G IA+A IG ++ STDYVFDG S+ E + T P+N+ Sbjct: 58 DGCEDEQDIAFKVNGHAPGYIAQACSDIGAILVHFSTDYVFDG-SKKEYVESNITKPINV 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE+++ T+NY I+RT+W++ G NF+ +MLRL+KE + VV DQFG PT Sbjct: 117 YGQSKLMGEQEIIKNTDNYRIIRTSWLFGKNGKNFVDTMLRLSKEMENVKVVNDQFGKPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 IAR +I NL GI+H+T + GP +W +FA I + P S Sbjct: 177 HTADIARKTAEII-NLNP-------GIYHITNE-GPCTWYEFASEIINNTV----PCS-- 221 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++++PTKA RP YS L NT + WK + L Sbjct: 222 ----SEEFPTKAKRPTYSV-----LTNTKTTPMRHWKNALNEYL 256 >gi|307277279|ref|ZP_07558383.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2134] gi|306506209|gb|EFM75375.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2134] Length = 299 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P+VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|193213369|ref|YP_001999322.1| dTDP-4-dehydrorhamnose reductase [Chlorobaculum parvum NCIB 8327] gi|193086846|gb|ACF12122.1| dTDP-4-dehydrorhamnose reductase [Chlorobaculum parvum NCIB 8327] Length = 291 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L ++ D P++++ F I+N A Sbjct: 1 MNLLVTGSRGQLGSELQALQNAASDHTWHFCDFPELNITDADKVEVFCRDHEIGAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE EP+ AF +N +GA ++A A ++G +++STDYVFDG + P E P Sbjct: 61 AYTAVDKAESEPDAAFRVNRDGAASLAATAKAVGAHLVHVSTDYVFDGSNHRPYREDDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKL GEE + + ++VI+RT+W+YS G NF+ +MLRL ER +I VV DQ Sbjct: 121 APCGVYGRSKLEGEEAIRASGCSHVIIRTSWLYSAHGQNFVKTMLRLGDEREQIGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A I+ + L S + FH + + G SW DFA+ I AE G Sbjct: 181 VGTPTWAADLAGTIVLMLEQLDPASQYAES--FHYSNE-GVCSWYDFAKAIM--DAE--G 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I + ++PT A RP +S L+ K+ I I W + + +L + Sbjct: 234 LSCKVSPIESWEFPTPAARPHFSVLNKRKIREFLGIEIPHWHDSLLKMLEEL 285 >gi|69244635|ref|ZP_00602899.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|257880165|ref|ZP_05659818.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,230,933] gi|257882966|ref|ZP_05662619.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,502] gi|257891452|ref|ZP_05671105.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,410] gi|258614491|ref|ZP_05712261.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|68196226|gb|EAN10655.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|257814393|gb|EEV43151.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,230,933] gi|257818624|gb|EEV45952.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,502] gi|257827812|gb|EEV54438.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,410] Length = 283 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 160/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + ++++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLQYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K + I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKKTEELGFV-IPTWQEALAQML 275 >gi|228946125|ref|ZP_04108460.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813538|gb|EEM59824.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 282 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 161/287 (56%), Gaps = 17/287 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLMQVLSRTHHELYGVNRTKLDITNKIRVCSYIDRVKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE + +A+ +N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKDKGLAYEVNVLGTKYIAQAAGRIKCKFVYISTDYVFDGEKHTPYNLEDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT N+ I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEHIVTKYTKNHFIIRTSWIFGKGDGHFIAKIGKIASLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT AL +A+ I +LIE T G++H+T + G SW +FA F++ R Sbjct: 181 GSPTYALDLAKFI----EDLIE---TDQYGLYHVTNE-GICSWYEFA-VEFFKDFNRD-- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL--DCSKLANTHNIRISTWKEGVR 284 + + T+++P A+RP YS L DC L +R WKE ++ Sbjct: 230 -INIIPLTTEEFPQIANRPKYSVLSKDCIMLNGLKPLR--HWKEALK 273 >gi|312953333|ref|ZP_07772175.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0102] gi|310628721|gb|EFQ12004.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0102] gi|315154453|gb|EFT98469.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0031] Length = 299 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + S+ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------SEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|172059824|ref|YP_001807476.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] gi|171992341|gb|ACB63260.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] Length = 299 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/284 (39%), Positives = 146/284 (51%), Gaps = 7/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL +F P +I+NPAAYTAV Sbjct: 13 LVTGVNGQVGFELLRSLQGLGRVVPCDRSTLDLSDLDRVRAFVRDLKPSLIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E + A +NA+ A+ G I+ STDYVFDG E NP+N Sbjct: 73 DKAESEVDAARRLNADVPRIFAEEMARTGGALIHYSTDYVFDGTKAGAYTETDAPNPVNA 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE +A+ ++ILRT+WVY G NFLL+ML+L +ER E+ VV DQ G PT Sbjct: 133 YGATKLEGERAIAATGCAHLILRTSWVYGRRGRNFLLTMLKLGRERSELRVVADQVGAPT 192 Query: 184 SALQIARAIIQIAHNLIENSDT----SLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 A IA A I ++D G++H T+ G SW FAE IF + P Sbjct: 193 WAKTIAAATAHIVAQSTASADADWLKQRAGVYHFTS-AGATSWCGFAEAIFAAALAPHAP 251 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV I + YPT A RPA S L KL T +R+ W++ + Sbjct: 252 --KVVPIASVDYPTPAKRPANSKLALDKLTATFGVRMPDWRDAL 293 >gi|294620975|ref|ZP_06700174.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium U0317] gi|291599433|gb|EFF30451.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium U0317] Length = 282 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 160/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + ++++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLQYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K + I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKKTEELGFV-IPTWQEALAQML 275 >gi|254458197|ref|ZP_05071623.1| dTDP-4-dehydrorhamnose reductase [Campylobacterales bacterium GD 1] gi|207085033|gb|EDZ62319.1| dTDP-4-dehydrorhamnose reductase [Campylobacterales bacterium GD 1] Length = 276 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/255 (41%), Positives = 152/255 (59%), Gaps = 12/255 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ + F + D+IIN AAYTAVDKAE + ++A +IN + ++A+ + Sbjct: 21 RDSLDITDEQSIRDFIDLHNIDIIINCAAYTAVDKAESQKDMADAINHKAVKSLAQISKE 80 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAW 149 I I+ISTDYVF G + P E T P ++YG SKL E+ + N +I+RT+W Sbjct: 81 KNIKLIHISTDYVFSGQNYKPYIETDFTAPNSVYGSSKLDAEKALQKINPKNSIIIRTSW 140 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-ENSDTSLR 208 VYS FG+NF+ +MLRL E+ E+ V+ DQ GTPT A +A+ I++I N+ EN D Sbjct: 141 VYSSFGANFVKTMLRLGSEKDELGVIFDQVGTPTYARDLAKTILEILPNVQNENVD---- 196 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 I+H + + G +SW DFA+ I + A+R K+ I TK YPT A+RP YS L+ SK+ Sbjct: 197 -IYHYSNE-GVLSWYDFAKEIM-KMAKRD---CKINPIETKDYPTPANRPHYSLLNKSKI 250 Query: 269 ANTHNIRISTWKEGV 283 NI I WK+ + Sbjct: 251 KQKFNIEIPFWKDSL 265 >gi|121607690|ref|YP_995497.1| dTDP-4-dehydrorhamnose reductase [Verminephrobacter eiseniae EF01-2] gi|121552330|gb|ABM56479.1| dTDP-4-dehydrorhamnose reductase [Verminephrobacter eiseniae EF01-2] Length = 299 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 15/300 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L + +G D P + PDVI+N Sbjct: 1 MNILLFGRNGQLGWQLQRSLAVLGPVTALGHDSTGHCADFANPCGVVDTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE EP++A ++NA GA+A+ A ++ STDYVFDG + P E Sbjct: 61 AAAHTAVDQAESEPDLARTLNALTPGALAQEAARSAALFVHYSTDYVFDGSGQRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG++KL GE+ V ++I RT+WVY+ G+NF +MLRLA+++ ++V+ Sbjct: 121 PPAPLSVYGRTKLEGEQAVQQSGAQHLIFRTSWVYAARGANFAKTMLRLAQQQERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A L + + G++H+ A G +W +A Y+ + R Sbjct: 181 DQWGAPTGAELLADVTAHAIRQLQQRPQDA--GLYHLAA-AGATTWNGYARYVL--ARAR 235 Query: 237 GGPY------SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++V I +PT A RP S LD KL + + W+ GV +L I Sbjct: 236 QSPLAGKIMATEVLPISGSAFPTPAIRPRNSRLDTHKLQTRFGLTLPHWQTGVARMLSEI 295 >gi|297374637|emb|CBL42924.1| dTDP-4-dehydrorhamnose reductase [Candidatus Magnetobacterium bavaricum] Length = 278 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 12/250 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R D+D+ + PDV++N AAYTAVD+AE E E+A +N G +A A Sbjct: 21 RADLDITDAGRVFKVVDVYRPDVVVNCAAYTAVDRAETEREMAMLVNGIGVQNLALACSK 80 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +P +ISTDYVFDG P F T+P+N YG+SKLAGE V T + I+RT+W+ Sbjct: 81 YDVPLCHISTDYVFDGSKGAPYTPFDNTSPVNFYGESKLAGECYVRWLTGKFYIIRTSWL 140 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 Y G NF+ +MLRL+ +R E+ VV DQ G PTS + +ARAI I ++ G+ Sbjct: 141 YGARGGNFVKTMLRLSTQRDEVRVVHDQVGNPTSTVSLARAIKVII-------ESGRYGV 193 Query: 211 FHMT-ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 +H+T G ++W DFA E G ++V I T +YPT A RP YS LD Sbjct: 194 YHVTDQTDGKLNWYDFA----CEIMRLAGAGTRVVPITTAEYPTAARRPVYSVLDLEPSR 249 Query: 270 NTHNIRISTW 279 + + + +W Sbjct: 250 LSVDYPLKSW 259 >gi|313157657|gb|EFR57068.1| dTDP-4-dehydrorhamnose reductase [Alistipes sp. HGB5] Length = 287 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 113/285 (39%), Positives = 157/285 (55%), Gaps = 10/285 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G NGQ+ +L + CV I ++D+ DVI+N AA Sbjct: 2 LNILITGANGQLGSALRRLGCVSPHNYICTDVAELDITDAAAVLRTVEERRIDVIVNCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V++AE++ A +N + AG +A AA + G ++STDYVFDG + TP E + + Sbjct: 62 YTDVERAEEDEPRADLLNHKAAGNLAAAAKATGATLFHVSTDYVFDGTAHTPYREDTAPS 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL YG++KLAGE V + Y+I RTAW+YS +G NFL +MLRL ER + VV DQ Sbjct: 122 PLGAYGRTKLAGERAVMASGCRYLIFRTAWLYSEYGHNFLKTMLRLTSERDTLQVVFDQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI I IE+ G++H T D G SW DFA I +A G Sbjct: 182 GTPTYAGDLALAIFSI----IESERYAGNEGVYHFT-DEGVCSWYDFATEI---AAAAGH 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++ T ++PTKA RPAYS LD +K+ T + I W+E + Sbjct: 234 DSCRIIPCHTSEFPTKAQRPAYSVLDKTKIKTTFQMDIPHWREAM 278 >gi|300853757|ref|YP_003778741.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] gi|300433872|gb|ADK13639.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] Length = 294 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 160/300 (53%), Gaps = 25/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+A L + V D E+ R ++D+ K D F Sbjct: 1 MKILITGGKGQLAGQLREILVMGKSKIRALDKIYSDAEVKFTSREELDITKLNDVRDFMA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 ++PD+I+N AAYT VDK E + E AF +N+ GA +A A+ + ++ISTDYVF+G Sbjct: 61 DYTPDIIVNCAAYTNVDKCEIDFENAFKVNSLGARNLALASQNTKTKLVHISTDYVFNGR 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E +P+++YGK+KL GE+ + + Y I+RT+W+Y ++G NF+ ++L++AK Sbjct: 121 GAIPFRECDLPDPISVYGKTKLLGEQYIRENCSRYFIVRTSWLYGLYGKNFVYTILKVAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A ++++A T GI+H + G SW DFA Sbjct: 181 EKGHLDVVNDQRGNPTNAEDLAYHLLKLAL-------TCEYGIYHCSGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G V + +++ A RP +S LD L T + WK+ +++ + Sbjct: 233 KI----VEYAGIDCTVSPMTSEKLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALKSFI 288 >gi|256762993|ref|ZP_05503573.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T3] gi|256684244|gb|EEU23939.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T3] Length = 280 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P+VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|315171509|gb|EFU15526.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1342] Length = 299 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P+VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|161525768|ref|YP_001580780.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189349510|ref|YP_001945138.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|160343197|gb|ABX16283.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189333532|dbj|BAG42602.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] Length = 300 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/283 (37%), Positives = 142/283 (50%), Gaps = 10/283 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTAV Sbjct: 10 LLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLNQVRDVVRDLKPDLIVNPAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + +A +NA+ +A+ A IG I+ STDYVF G P E +P N+ Sbjct: 70 DQAETDVAMATRLNAQAPAVLAEEAKRIGAALIHYSTDYVFAGTKAGPYVEDDAVDPQNV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E+ VV DQ G PT Sbjct: 130 YGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELKVVADQIGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSD-------TSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 + IA + I + G++H+ A G SW FAE IF S + Sbjct: 190 WSNTIATLTAHVVAQGIAAGAAGREAWWNAHSGVYHLCA-AGSTSWHGFAEAIFRLSDMQ 248 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 P V I YPT A RPA S + KLA +R W Sbjct: 249 KKP--SVKPIPATAYPTPASRPANSRMSNEKLAEHFGLRAPHW 289 >gi|157373247|ref|YP_001471847.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] gi|157315621|gb|ABV34719.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] Length = 289 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/291 (36%), Positives = 160/291 (54%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L++G +GQ+AQ+L + +E + +G DI+L + S + D+IIN AAY Sbjct: 6 LKVLILGKSGQLAQALIANKPTPIECVALGHLDINLAVTGEIESAITTNRADIIINTAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE EP +AF INA IAKAA + + I++STDYVFDG TP F +P Sbjct: 66 TQVDLAESEPSLAFEINALAVENIAKAARNTNVHLIHLSTDYVFDGKQSTPYTIFDTPHP 125 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +NIYG SKL GE+ + +RT+ VYS +G+NF+ +MLRL +E+ EI V+ DQ Sbjct: 126 INIYGASKLTGEKALRQCMPVGSTTVRTSSVYSQYGNNFVKTMLRLMREKSEIKVISDQI 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PTSA ++AR + + SL ++H D G SW FA I + A + G Sbjct: 186 SSPTSAKELARFLWMLTE------QESLSPLYHW-CDSGKTSWYQFAVTI-QQLALKYGK 237 Query: 240 YSKVYRIF---TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K I +++Y A RP +S LD + + + W+E + +++ Sbjct: 238 LEKAISIIPISSQEYGAAALRPPFSQLDIGQ--SQALLHSKPWQENLESLI 286 >gi|258647891|ref|ZP_05735360.1| dTDP-4-dehydrorhamnose reductase [Prevotella tannerae ATCC 51259] gi|260851724|gb|EEX71593.1| dTDP-4-dehydrorhamnose reductase [Prevotella tannerae ATCC 51259] Length = 289 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 159/289 (55%), Gaps = 12/289 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ + + E + ++D+ +F ++ D IIN AAYT Sbjct: 6 LITGCKGQLGNEIQLLAPSYPEWTFYYTDKEELDITDLNAINTFIATYHIDTIINCAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++ +N A +A+A ++ I+ISTDYVFDG P E T P Sbjct: 66 AVDKAESEEKLCNLLNHIAARNLAEAIAAVDGHFIHISTDYVFDGEHYLPYKEEDSTRPQ 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYG++KL GE V V++RT+W+YS FG+NF+ +MLRL KE++++ V+ DQ GT Sbjct: 126 TIYGETKLKGETAVFKACPEAVVIRTSWLYSAFGNNFVKTMLRLGKEKQQLGVIFDQIGT 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+AI+ N+I+ + G++H + +G SW DF I + G Sbjct: 186 PTYAHDLAKAIL----NIIQQGPQA--GLYHFSNEGA-CSWFDFTRAIHRLA---GITTC 235 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +YPT A RP YS LD +K+ T+ + I W++ +++ + + Sbjct: 236 DVRPLHTTEYPTAAKRPNYSVLDKTKIKTTYKLTIPWWEDSLQDCIARL 284 >gi|258540228|ref|YP_003174727.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus Lc 705] gi|56684477|gb|AAW22446.1| RmlD [Lactobacillus rhamnosus] gi|56684497|gb|AAW22464.1| RmlD [Lactobacillus rhamnosus] gi|257151904|emb|CAR90876.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus Lc 705] Length = 280 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 155/292 (53%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + I +N +G +AKAA+ + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSKEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 234 PVS------SKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|56684517|gb|AAW22482.1| RmlD [Lactobacillus rhamnosus] Length = 280 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 155/292 (53%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + I +N +G +AKAA+ + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSKEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDSS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 234 PVS------SKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|227891405|ref|ZP_04009210.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] gi|227866794|gb|EEJ74215.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] Length = 304 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/258 (39%), Positives = 148/258 (57%), Gaps = 15/258 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSI 91 +D+ + PDVI++ AA+TAVD AEDE + A +IN +G IA AA I Sbjct: 53 LDITNNDEVQKIIEMVDPDVIVHCAAWTAVDAAEDEDKQAKVRAINVDGTQNIANAAKKI 112 Query: 92 GIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +Y+STDYVFDG + P + PLN+YG++KL GE VA+ + Y I+R AWV Sbjct: 113 DAKMVYLSTDYVFDGQGKKPWKPDCKDYKPLNVYGQTKLDGELAVANTLDKYFIVRIAWV 172 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + G+NF+ +ML+LA+ E++VV DQ GTPT +AR L++ ++T G Sbjct: 173 FGVNGANFIKTMLKLAENHDELTVVSDQIGTPTYTYDLARL-------LVDMTETDKYGY 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLA 269 +H T +GG +SWADFA+ IF +S G KV + T +Y +KA RP S LD SKL Sbjct: 226 YHATNEGGYISWADFAKEIFKQS----GKNVKVTPVTTAEYGVSKAARPFNSRLDKSKLV 281 Query: 270 NTHNIRISTWKEGVRNIL 287 + TW++ + L Sbjct: 282 ENGFDPLPTWQDALSRYL 299 >gi|315149173|gb|EFT93189.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0012] Length = 299 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G IA+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHIAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|227550498|ref|ZP_03980547.1| possible dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX1330] gi|257897100|ref|ZP_05676753.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com12] gi|293377323|ref|ZP_06623527.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium PC4.1] gi|227180399|gb|EEI61371.1| possible dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX1330] gi|257833665|gb|EEV60086.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com12] gi|292644015|gb|EFF62121.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium PC4.1] Length = 283 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|184154575|ref|YP_001842915.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum IFO 3956] gi|183225919|dbj|BAG26435.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum IFO 3956] gi|299782753|gb|ADJ40751.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum CECT 5716] Length = 285 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 156/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ L ++ + +V +D+ + S P VI + AAY Sbjct: 3 EILITGATGQLGSELRNLLDERNVAYDAFDSHGLDITDEETVMSKVEELQPKVIYHCAAY 62 Query: 61 TAVDKAEDEPEIA-FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED+ + A + +N G IA+AA +G +Y+STDYVFDG++ E PTN Sbjct: 63 TAVDNAEDQFKAANWQVNETGTQNIAQAAKKVGALLVYVSTDYVFDGINPGEYKEDDPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGEE V +NY I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQF Sbjct: 123 PKNEYGKAKLAGEEIVKQTLDNYYIVRTSWVFGKYGRNFVYTMLRLAKDHDRLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A I + S G + ++ D SW +FA+ I + P Sbjct: 183 GRPTWTRTLAEFITHLVDT------KSPYGTYQLSNDDS-CSWYEFAKEILVDKDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +++YP KA+RP +S + K A +I TW+E ++ + +I Sbjct: 236 ------VTSEEYPQKAYRPRHSIMSLEK-AKATGYKIPTWQEALKAFMSDI 279 >gi|170698772|ref|ZP_02889836.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170136329|gb|EDT04593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 300 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 146/289 (50%), Gaps = 8/289 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ R +DL +F P +I+NPAAYTAV Sbjct: 13 LVTGVNGQVGFELLRSLQGLGRVVPCDRSTLDLSDLDRVRAFVRDLKPSLIVNPAAYTAV 72 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE E + A +NA+ A+ G I+ STDYVFDG E NP+N Sbjct: 73 DKAETEVDAARRLNADVPRIFAEELARTGGALIHYSTDYVFDGTKAGAYTETDAPNPVNA 132 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L KER E+ VV DQ G PT Sbjct: 133 YGATKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGKERPELRVVADQVGAPT 192 Query: 184 SALQIARAIIQI-----AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 A IA I A + + + G++H T+ G SW FA+ I + Sbjct: 193 WARTIAVVTSHIIAQQAAADDVADWWAKRSGVYHFTSSGA-TSWHGFAQAILEHAMGELA 251 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P KV I +YP A RPA S + KLA T + + W + +R L Sbjct: 252 P--KVLPIPASEYPVPAKRPANSRMALEKLARTFGVTMPAWDDALRLCL 298 >gi|163743495|ref|ZP_02150873.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis 2.10] gi|161383198|gb|EDQ07589.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis 2.10] Length = 282 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 122/288 (42%), Positives = 159/288 (55%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L++ D +I+ + R DL P A + +P +IN AAYT V Sbjct: 3 LVFGKTGQVARELAA---HD-DILCLSRDQADLTDPAACAEVIRTHAPAAVINAAAYTVV 58 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE E E+A IN G +A+ ++GIP + +STDYVFDG +P P PLN Sbjct: 59 DRAEAEEELATLINGTTPGVMAETCATLGIPFVTLSTDYVFDGKGSSPWHPDEPVAPLNA 118 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SK GE V +VILRT+WV S GSNF+ +MLRL KER + VV DQ G PT Sbjct: 119 YGRSKQLGEAAVRLAGGAHVILRTSWVVSAHGSNFVKTMLRLGKERERMRVVADQIGAPT 178 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A I+IA LI + + S G +H G P SWA A IF E+A Sbjct: 179 PARAIAAACIEIARQLIADPEKS--GTYHFA--GQPETSWAGVASEIFTEAAIP----CA 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W+ G+++IL ++ Sbjct: 231 VAEIPSSAYPTAAPRPLNSRLDCSTLERAFGITRPDWQAGLKDILKDL 278 >gi|197106765|ref|YP_002132142.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] gi|196480185|gb|ACG79713.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] Length = 300 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 147/291 (50%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ L G GQ+A+ + DV + + R + DL P A PDV++ AA Sbjct: 3 VRVLQFGTTGQLAREVIRQAPDHDVALTALSRAEADLADPDKAARRVAEHRPDVVVLAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE E +A +NAE GAIA+A S G +++STDYVFDG P PT Sbjct: 63 YTAVDQAETETLLARRVNAEAPGAIARACASCGAALVHVSTDYVFDGAKGAPYLPNDPTG 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG +KL GE KV +++RT+WV S G NF+ +MLRLA E R ++VV DQF Sbjct: 123 PLNTYGLTKLEGERKVLDACPRALVVRTSWVVSAHGRNFVKTMLRLAAEGRPLNVVDDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA +A ++ A L + H A+ G SW FAE IF G Sbjct: 183 GRPTSAADLAGFVLSQARRLADAPAGDPAFGLHHFANAGETSWRGFAEGIF--DLAYGDR 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T P A RPA LD S + W+E + I+ + Sbjct: 241 APAVGAIATADRPAPAARPARGTLDTSATEAVFGVTPRPWREALAEIVAEL 291 >gi|257888525|ref|ZP_05668178.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,141,733] gi|257824579|gb|EEV51511.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,141,733] Length = 283 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDMDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|326336357|ref|ZP_08202528.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691531|gb|EGD33499.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 287 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 157/288 (54%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+A + V I + ++D+ SFF + +++IN AAYT Sbjct: 5 LITGASGQLAMEIKQELNNSVSNNYIFTTKNELDVTDADKVNSFFKKNAVELVINCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ +E + E A +N IA A G CI++STDYVF G TP E T+PL Sbjct: 65 NVNGSEIDKETANLVNHLAVKNIANACTEQGSACIHLSTDYVFAGEKNTPYAETDATSPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KL GE + +++ILRT+W+YS FG+NF+ ++LR++KER+EI VV DQ T Sbjct: 125 GAYGQTKLLGESALQHSDVDFLILRTSWLYSAFGNNFVKNILRISKERKEIKVVFDQVST 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +AR II + IEN R + ++ G SW DFA I + G Sbjct: 185 PTYAKDLARFIIFV----IENKLYRGRQDVYHFSNEGVCSWYDFAVEIL----KLAGSDC 236 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV T+ +PT A RPAYS LD +K+ + I W++ + +++ N Sbjct: 237 KVIPCRTEDFPTPAARPAYSVLDKAKVKTDFSFPIPYWRDSLVSLMTN 284 >gi|256963466|ref|ZP_05567637.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HIP11704] gi|256953962|gb|EEU70594.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HIP11704] Length = 280 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSKELDITDADSTLAKVKEIQPSVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|307272373|ref|ZP_07553629.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0855] gi|307286606|ref|ZP_07566698.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0109] gi|306502317|gb|EFM71598.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0109] gi|306510927|gb|EFM79941.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0855] gi|315164322|gb|EFU08339.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1302] Length = 299 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSKELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|255524618|ref|ZP_05391571.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|255511642|gb|EET87929.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] Length = 293 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L + ++D E ++D+ + S+ Sbjct: 1 MKLLITGGKGQLGCQLKFIIEKNSSDIGKLDQRIKDAECKFTDYNELDITNCAEVISYVS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF PDVIIN AAYT VD E++ + AF +NA G +A A++ GI +++STDYVF+G Sbjct: 61 SFKPDVIINCAAYTNVDGCENDKDAAFKVNAIGPRNLAIASEKYGIKLLHVSTDYVFNGE 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP+++YGK+KL GE V + +NY I+RTAW+Y +G NF+ ++++ AK Sbjct: 121 GTVPFKEYDVPNPVSVYGKTKLLGESYVREHCSNYFIVRTAWLYGEYGKNFVYTIMKSAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + VV Q G PT A +A I++I T+ GI+H T G SW DFA Sbjct: 181 ENGHVDVVDYQRGNPTYAEDLAHHILKIIL-------TNEYGIYHCTGT-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G +V I + A RPAYS LD L T + WKE +++ + Sbjct: 233 KI----VEYSGIDCEVTPITPGKVNRLAKRPAYSSLDNMMLRVTLGDEMRPWKEALKSFI 288 Query: 288 VNI 290 + Sbjct: 289 TKV 291 >gi|329569824|gb|EGG51583.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1467] Length = 299 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|149909225|ref|ZP_01897882.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36] gi|149807749|gb|EDM67695.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36] Length = 293 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 163/293 (55%), Gaps = 12/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ LV G GQI QS+ + Q+ +++ +D+ A F +F P+V+IN AA Sbjct: 2 LRLLVTGQKGQIGQSIKDRIDHQEWDVLLTDIETLDITNAAQVARVFKAFKPNVVINAAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE+E A S+NA G +A ++G I+ ST+Y+F+G S E Sbjct: 62 YTEVDKAENEAGAAESVNAYGPYLLALQCHNVGALLIHFSTEYIFNGHSDCRYVETDTPA 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++KL GE+ + +Y ++Y+I+RT+WV+S + NF+ +ML L +E I +V DQF Sbjct: 122 PLNVYGRTKLQGEQYIKTYLSHYIIIRTSWVFSEYARNFVTTMLSLRREAEPIRIVNDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF-----WESA 234 G PT A +A + IA + ++ G ++ D VSW DFA IF ++ Sbjct: 182 GCPTYAGDVANLALDIAKERMAETNRYQLGEYNFCGD-SEVSWFDFACAIFDELDKYQPG 240 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E+G + + +++Y + A RP L+C K++ R S W+ +R+++ Sbjct: 241 EQG---RHLVGVTSEEYASIAVRPRNGILNCHKISPI--FRPSDWRRKLRHVI 288 >gi|302874989|ref|YP_003843622.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] gi|307690393|ref|ZP_07632839.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] gi|302577846|gb|ADL51858.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] Length = 278 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NGQ+ + L+ ++VE+I ++D+ K + + + PDV+IN AA Sbjct: 1 MRILITGANGQLGRELTKQYRNENVELILTDVDNLDITKVDEVFNIMIEKRPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDK E++ E A+ IN G +A AA +IG + +STDYVFDG P+ EF TN Sbjct: 61 HTAVDKCEEDVENAYRINTIGPKNLAAAAFAIGAEIVQVSTDYVFDGEGNAPLTEFDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG++KL GEE V S + ++RTAW+Y G+NF+ +M++L + E+ VV DQ Sbjct: 121 PQTVYGETKLQGEELVKSLNPRHYVVRTAWLYGD-GNNFVKTMIKLGESGNEVKVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTS + +A I +LI+N + G FH T G SW DFA+ IF Sbjct: 180 GSPTSTVDLANVI----RDLIKNKN---YGTFHATCK-GMCSWFDFAQEIF----RLKNM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ T+++P A RP YS L L T WKE ++ L + Sbjct: 228 DVKLVPCTTEEFPRPAKRPKYSVLRNYSLELTTGDITRDWKESLKEYLATL 278 >gi|189466783|ref|ZP_03015568.1| hypothetical protein BACINT_03159 [Bacteroides intestinalis DSM 17393] gi|189435047|gb|EDV04032.1| hypothetical protein BACINT_03159 [Bacteroides intestinalis DSM 17393] Length = 285 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 157/286 (54%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + DV++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYFFTDVQELDICDEHAVRACIAGNQIDVVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAED E+ +N E G +A+AA + G I +STDYVFDG + P E Sbjct: 61 AFTAVDKAEDNEELCRKLNEEAPGILARAAQAYGAAMIQVSTDYVFDGTAHIPYKEDCMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V +++RTAW+YSI+G+NF+ +M+RL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLGGEKEVMQNCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYAKDLAVAIYAAINQGI------VPGIYHFS-DEGVCSWYDFTVAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ NT I I W+E ++ Sbjct: 231 TTCKVSPLHTDEYPAKAPRPHYSVLDKTKIKNTFGIHIPHWEESLK 276 >gi|229549530|ref|ZP_04438255.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 29200] gi|256853641|ref|ZP_05559006.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T8] gi|307270365|ref|ZP_07551670.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4248] gi|307292432|ref|ZP_07572288.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0411] gi|3608397|gb|AAC35923.1| putative dTDP-4-keto-L-rhamnose reductase [Enterococcus faecalis OG1RF] gi|229305348|gb|EEN71344.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 29200] gi|256710584|gb|EEU25627.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T8] gi|306496561|gb|EFM66122.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0411] gi|306513273|gb|EFM81900.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4248] gi|315025873|gb|EFT37805.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2137] gi|315028188|gb|EFT40120.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4000] gi|315035722|gb|EFT47654.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0027] gi|315146140|gb|EFT90156.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2141] gi|315146323|gb|EFT90339.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4244] gi|315160177|gb|EFU04194.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0312] gi|315161850|gb|EFU05867.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0645] gi|315173062|gb|EFU17079.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1346] gi|327535584|gb|AEA94418.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis OG1RF] Length = 299 Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|115358134|ref|YP_775272.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115283422|gb|ABI88938.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 294 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 110/294 (37%), Positives = 156/294 (53%), Gaps = 10/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDIADADAVRRALEEHRAALVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A ++GIP I++STDYVFDG E + P Sbjct: 60 TAVDRAETEPDAAWQANRDGPAVLANACAALGIPLIHLSTDYVFDGRMPGAYAETAAVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG SKLAGEE V + ++ILR AWV+ G+NF+ +MLR+ +ER + VV DQ+ Sbjct: 120 LGVYGCSKLAGEEAVRERLPDRHLILRVAWVFGAHGNNFVRTMLRVGRERDVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-SWADFAEYIFWESAERGG 238 G PT A IA ++ IA +T G +H+ G PV +W FAE IF E A R G Sbjct: 180 GGPTHAGAIADTLLTIAARY-RAGETLRWGTYHLC--GTPVTTWHGFAETIFTE-ARRTG 235 Query: 239 PYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V I T YP A RPA S LDCS+L I +W G+ +L Sbjct: 236 LIDRVPVVRPIRTDAYPLPAPRPANSALDCSRLREHFGIESPSWLAGLTEVLAT 289 >gi|119475337|ref|ZP_01615690.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2143] gi|119451540|gb|EAW32773.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2143] Length = 299 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 158/289 (54%), Gaps = 16/289 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L +C + ++ + +D+ + P +IN AAYTA Sbjct: 21 LITGSNGQVGSELVVLCREKNIPFVAYNSQQLDITDSDRVFAEIKKQQPTAVINAAAYTA 80 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E A+++N EGA +A A + + ++ISTDYVFDG P E TNP++ Sbjct: 81 VDNAEIELSKAYAVNKEGAKNLAIACEELNAVLVHISTDYVFDGEKDGPYLETDKTNPVS 140 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE +V + + Y I+R +WV+ +G+NF+ +ML LAK E+ VV DQFG P Sbjct: 141 VYGASKLAGEREVVEFCSKYFIVRVSWVFGQYGNNFVKTMLGLAKNHTELKVVDDQFGAP 200 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW--ESAERGGPY 240 TSA QIA ++ + S + G +H+ ++ G V+W +FA IF A+ Sbjct: 201 TSADQIAEKLVTLV-----TSASINYGTYHLESNPG-VTWYEFANKIFQYAHDAKIIKNI 254 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST--WKEGVRNIL 287 +V+ I + YP RP SKLA+T + T W++G+ ++ Sbjct: 255 PRVHPIDSTHYPKPVMRPK-----NSKLASTSQFDLGTIDWEKGLEKLI 298 >gi|229545295|ref|ZP_04434020.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1322] gi|255972233|ref|ZP_05422819.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T1] gi|255975345|ref|ZP_05425931.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T2] gi|256956578|ref|ZP_05560749.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DS5] gi|257079504|ref|ZP_05573865.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis JH1] gi|257082116|ref|ZP_05576477.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis E1Sol] gi|257084731|ref|ZP_05579092.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Fly1] gi|257087323|ref|ZP_05581684.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis D6] gi|257416504|ref|ZP_05593498.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis AR01/DG] gi|294779043|ref|ZP_06744456.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis PC1.1] gi|300861372|ref|ZP_07107459.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TUSoD Ef11] gi|229309645|gb|EEN75632.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1322] gi|255963251|gb|EET95727.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T1] gi|255968217|gb|EET98839.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T2] gi|256947074|gb|EEU63706.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DS5] gi|256987534|gb|EEU74836.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis JH1] gi|256990146|gb|EEU77448.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis E1Sol] gi|256992761|gb|EEU80063.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Fly1] gi|256995353|gb|EEU82655.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis D6] gi|257158332|gb|EEU88292.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ARO1/DG] gi|294453873|gb|EFG22262.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis PC1.1] gi|300850411|gb|EFK78161.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TUSoD Ef11] gi|323481256|gb|ADX80695.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis 62] Length = 280 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|257422095|ref|ZP_05599085.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis X98] gi|307281877|ref|ZP_07562092.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0860] gi|257163919|gb|EEU93879.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis X98] gi|306503831|gb|EFM73053.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0860] gi|315157129|gb|EFU01146.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0043] Length = 299 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|289577888|ref|YP_003476515.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9] gi|289527601|gb|ADD01953.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9] Length = 298 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 111/310 (35%), Positives = 156/310 (50%), Gaps = 39/310 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP-----------------KDFA 43 MK L+ G GQ+A L S II GR +I + P D Sbjct: 1 MKILITGARGQLALQLRS-------IIEKGRSEIGEIDPIYKYAVIKYTSHDELDITDLT 53 Query: 44 S---FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 S F + PD+IIN AAYT VDK E + + AF +NA G +A AA +G +++ST Sbjct: 54 SVLRFVDEYRPDIIINCAAYTNVDKCESDVDTAFKVNAIGPRNLAIAAQRVGAKLLHVST 113 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 DYVF+G P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ Sbjct: 114 DYVFNGTGNVPFREYDVPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVY 173 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 S+L+ AKE+ + VV DQ G PT+A +A I+++ T GI+H T G Sbjct: 174 SILKAAKEKGYLEVVNDQKGNPTNAEDLAHHILKLIL-------TEEYGIYHCTGK-GEC 225 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 SW DFA I E G V I + + A RP YS LD L T + WK Sbjct: 226 SWYDFACKI----VEYAGINCTVVPITSDKINRPAKRPFYSSLDNMMLRCTVGDEMRNWK 281 Query: 281 EGVRNILVNI 290 + ++ + ++ Sbjct: 282 DALKAFIEDL 291 >gi|218896254|ref|YP_002444665.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9842] gi|218545192|gb|ACK97586.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9842] Length = 237 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 138/238 (57%), Gaps = 12/238 (5%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +II+ AAYT VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G Sbjct: 7 PHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPE 66 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER Sbjct: 67 GYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERD 126 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 EISVV DQ G+PT + I ++ H TSL G +H++ + G SW +FA+ IF Sbjct: 127 EISVVADQVGSPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIF 178 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 179 SYTNMK----VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFI 232 >gi|256961444|ref|ZP_05565615.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Merz96] gi|256951940|gb|EEU68572.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Merz96] Length = 280 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAVDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|294506498|ref|YP_003570556.1| DTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|294342826|emb|CBH23604.1| DTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 302 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 144/276 (52%), Gaps = 4/276 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ +L + GR +DL K P++I+N AAYT V Sbjct: 9 LLLGATGQVGHALRCTLAPLSRVHTPGRAAVDLTDLKSVREAVRELGPELIVNAAAYTDV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE+EP A INAE +A+AA ++G ++ STDYVF G R P E +P+++ Sbjct: 69 DGAEEEPGRAARINAEAPRVLAEAARAVGAWLVHYSTDYVFGGTKRAPYTEADAPSPISV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++K GE + + ++ILRT+W+YS SNF+ +MLRLA E ++VV DQ G PT Sbjct: 129 YGRTKRDGEAAIQAVGGRHLILRTSWMYSRRRSNFVRTMLRLAAENDRLTVVDDQIGVPT 188 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A A A + L + G +H+ A G SW A +F A+ G V Sbjct: 189 WAGWCAEATASVCERLFADDAAPAAGCYHL-AGTGQTSWYGLARAVF---AQFGRTDVTV 244 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + +Y T A RPAY+ LD S+ ++ +TW Sbjct: 245 EPVSSDEYETAAPRPAYTVLDSSRARAAFDLPATTW 280 >gi|293382818|ref|ZP_06628739.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis R712] gi|293387973|ref|ZP_06632506.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis S613] gi|312905901|ref|ZP_07764915.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 512] gi|312908951|ref|ZP_07767814.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 516] gi|291079809|gb|EFE17173.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis R712] gi|291082629|gb|EFE19592.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis S613] gi|310628068|gb|EFQ11351.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 512] gi|311290735|gb|EFQ69291.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 516] Length = 299 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAVDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|256820039|ref|YP_003141318.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea DSM 7271] gi|256581622|gb|ACU92757.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea DSM 7271] Length = 280 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 106/282 (37%), Positives = 150/282 (53%), Gaps = 9/282 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G +GQ+ + + + +D+ + +F + VI+N AAY Sbjct: 1 MNVLVTGGSGQLGSEIQANPHKKSCYYFTDINSLDICDVQAIRAFVQLNNIGVIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A IN +A +P I+ISTDYVF G TP E PT P Sbjct: 61 TNVDKAEDDSALATLINHTAVENLATVCKEHNLPLIHISTDYVFGGSKNTPYTETDPTTP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG +KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL+ ER E+ VV DQ Sbjct: 121 LGVYGCTKLAGEQVIQQAGIEHLIIRTAWLYSLRFGHNFVKTIQRLSAERTELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A I+Q NL R ++H + + G SW DFA I +S G Sbjct: 181 GTPTNASDLADFIVQAVENLWYKGK---REVYHFSNE-GVCSWYDFAVTIVAQS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 KV + ++P+K RPAYS LD +KL N I W+ Sbjct: 233 NCKVLPCRSDEFPSKVTRPAYSVLDKTKLKKDFNYPIPHWRH 274 >gi|303230605|ref|ZP_07317355.1| dTDP-4-dehydrorhamnose reductase [Veillonella atypica ACS-049-V-Sch6] gi|302514660|gb|EFL56652.1| dTDP-4-dehydrorhamnose reductase [Veillonella atypica ACS-049-V-Sch6] Length = 301 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + + + + R + DLL K + L + P II+ AAY Sbjct: 20 KILVTGGTGQLGSDIIKLLETYHINYVSPTRNEFDLLNSKQMNEYILKYKPTHIIHCAAY 79 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPT 118 TAVD+AE+ + +N G + + GI +YISTDYVFDGL IDE Sbjct: 80 TAVDQAENNQRDCYYVNVVGTEKLVMLSKMFGIIMMYISTDYVFDGLGTHFHTIDE--SI 137 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+N YG++K GE V + + I+R +W++S G+NF+ +M+RL+ ER +SVV DQ Sbjct: 138 NPINWYGRTKAEGEAWVRNNIRRHFIIRVSWLFSNHGNNFVKTMIRLSNERESLSVVDDQ 197 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT + +AR I+Q+ T G +H+ + G SWADFA+ I ++ Sbjct: 198 IGSPTYTVDVARVILQLL-------GTQSYGTYHVRNE-GVCSWADFAQEII----KQQK 245 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K++RI + +YPT A RP S LD S+L + I + TW++ + +L Sbjct: 246 IDCKIHRIPSIEYPTPAKRPLNSRLDMSQLIDL-GITMPTWQDALNRML 293 >gi|225386776|ref|ZP_03756540.1| hypothetical protein CLOSTASPAR_00524 [Clostridium asparagiforme DSM 15981] gi|225047138|gb|EEG57384.1| hypothetical protein CLOSTASPAR_00524 [Clostridium asparagiforme DSM 15981] Length = 288 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 148/291 (50%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ Q L + + + +E + V ++D+ SPD +I+ AA Sbjct: 4 MKVLVTGAKGQLGQDLMNELAKRGIEAVGVDVQEMDITDAAAVDRVMKQVSPDAVIHCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INAEG IA+ + +YISTDYVF+G P + Sbjct: 64 YTAVDAAEDNLELCRKINAEGTRNIARVCKELDSKLMYISTDYVFNGQGERPWEPDDHRE 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V Y +R AWV+ + G NF+ +MLRL +ER +SVV DQ Sbjct: 124 PLNVYGLTKYEGEIAVEQAVKKYFTVRIAWVFGLNGKNFIKTMLRLGRERGAVSVVDDQI 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 184 GSPTYTYDLARLLVDMIQ-------TECYGRYHATNE-GICSWYEFACEIFKQA---GMD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + YP KA RP+ S + KL R+ W++ + L + Sbjct: 233 QVKVTPVDSASYPAKAKRPSNSRMSKEKLTENGFERLPDWQDALSRYLKEL 283 >gi|300853734|ref|YP_003778718.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] gi|300433849|gb|ADK13616.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] Length = 295 Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 160/300 (53%), Gaps = 25/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+A L + V D E+ + ++D+ K D +F Sbjct: 1 MKVLITGGKGQLAGQLRKILVSGKSEIGALDKVYSDAEVRFPNKRELDITKLADVRNFVT 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 ++P +IIN AAYT VDK E + E A +N+ GA +A A+ + I I+ISTDYVF+G Sbjct: 61 DYAPSIIINCAAYTNVDKCETDFESALKVNSLGARNLALASQNTKIRLIHISTDYVFNGR 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ +P+++YGK+KL GE+ + + Y I+RT+W+Y ++G NF+ ++L+ AK Sbjct: 121 GTVPFREYDLPDPVSVYGKTKLLGEQYIKENCSRYFIVRTSWLYGLYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER + VV DQ G PT+A +A I+++A T G++H T + G SW DFA Sbjct: 181 ERGHLDVVNDQRGNPTNAEDLAYHILKLAL-------TDEYGVYHCTGN-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V + ++ A RP +S LD L T + WK+ +++ + Sbjct: 233 KI----VDYAGIDCTVSPMTSENLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALKSFI 288 >gi|262374522|ref|ZP_06067796.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205] gi|262310518|gb|EEY91608.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205] Length = 302 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/303 (33%), Positives = 157/303 (51%), Gaps = 16/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP--------DIDLLKPKDFASFFLSFSPD 52 MK L++G NGQ+ L E+I + R DI + DF PD Sbjct: 1 MKILLLGKNGQVGWELQRALQPLGEVIALDRQRSEEGFCGDISNFEAIDFV--LQQLQPD 58 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AYTAVDKAE EP A IN++ +A A G I+ STDYVF+G Sbjct: 59 VIVNATAYTAVDKAESEPNQAELINSQAVKHLAVQAKKNGALLIHYSTDYVFNGEGENAW 118 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T P+N+YG++K GE ++ ++ RT WVY+ G NF+ +ML+L + E+ Sbjct: 119 KEDDQTAPVNLYGQTKRQGEVELEQSGVAFINFRTCWVYAARGHNFIKTMLKLGHMKEEL 178 Query: 173 SVVCDQFGTPTSALQIARAIIQI-AHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYI 229 +++ DQ G PT A IA Q+ + ++ ++ + L G +H+ A G +W D+A ++ Sbjct: 179 NIINDQVGVPTGAALIADVTAQVLRYYFLQTAEQKSQLHGHYHL-APKGETTWFDYANFV 237 Query: 230 FWESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F +++++G + I T+ YPT A RP S L+ KL I + W++GV +L Sbjct: 238 FDQASKQGQTFVLKSTNPIATEAYPTPAKRPLNSRLNTEKLQQKFKIHLPYWQQGVVQVL 297 Query: 288 VNI 290 I Sbjct: 298 EEI 300 >gi|221311746|ref|ZP_03593593.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. 168] gi|221316072|ref|ZP_03597877.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320983|ref|ZP_03602277.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. JH642] gi|221325268|ref|ZP_03606562.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. SMY] gi|255767795|ref|NP_391661.3| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis str. 168] gi|254763400|sp|P39631|SPSK_BACSU RecName: Full=Spore coat polysaccharide biosynthesis protein spsK gi|225185423|emb|CAB15808.3| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 283 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 155/287 (54%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ IN GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLINGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H+ ++ G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKLF--------SHPPGIYHV-SNSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILSVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYL 275 >gi|56684537|gb|AAW22500.1| RmlD [Lactobacillus rhamnosus] Length = 280 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 154/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + I +N +G +AKAA+ + +YISTDYVFDG S Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSEEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 234 PVS------SKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|238927718|ref|ZP_04659478.1| possible dTDP-4-dehydrorhamnose reductase [Selenomonas flueggei ATCC 43531] gi|238884434|gb|EEQ48072.1| possible dTDP-4-dehydrorhamnose reductase [Selenomonas flueggei ATCC 43531] Length = 315 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 148/288 (51%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + C + E+ V L + + PD I++ AA Sbjct: 32 MKILITGATGQLGHDCAEECRARGHEVHGVSSELFPLSDENVMRAVLDATEPDAILHAAA 91 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP + +NA G +A+ A +Y+STDYVF G P + T Sbjct: 92 YTAVDKAEDEPSLCRKVNAAGTEILARLARERDAKLLYVSTDYVFPGTGDAPHETNELTA 151 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGEE V + Y I+RT+WV+ G NF+ +ML L+K + +S+V DQ Sbjct: 152 PHNVYGASKLAGEEAVQQHLEKYFIVRTSWVFGAHGKNFVKTMLELSKTHKSLSIVADQI 211 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++ +++E+ GI+H T +G SWA FA IF ++ G Sbjct: 212 GSPTYTRDLAPLLV----DMLESEKY---GIYHATNEGF-CSWAKFAAEIFRQA----GA 259 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + + YPTKA RP S L L R+ TW++ V L Sbjct: 260 DVNVTSVPSHMYPTKAVRPKNSRLSKKSLDEAGFRRLPTWQDAVGRFL 307 >gi|257419745|ref|ZP_05596739.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T11] gi|257161573|gb|EEU91533.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T11] Length = 280 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 158/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 63 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R ++ VV DQFG Sbjct: 123 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLKVVDDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 183 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|29376699|ref|NP_815853.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis V583] gi|227520246|ref|ZP_03950295.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0104] gi|227555321|ref|ZP_03985368.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HH22] gi|29344163|gb|AAO81923.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis V583] gi|227072325|gb|EEI10288.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0104] gi|227175532|gb|EEI56504.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HH22] gi|315575178|gb|EFU87369.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0309B] gi|315582605|gb|EFU94796.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0309A] Length = 299 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 158/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R ++ VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLKVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|295133947|ref|YP_003584623.1| dTDP-4-dehydrorhamnose reductase [Zunongwangia profunda SM-A87] gi|294981962|gb|ADF52427.1| dTDP-4-dehydrorhamnose reductase [Zunongwangia profunda SM-A87] Length = 285 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+A+ + + V +++ ++D+ K + D IN AAY Sbjct: 3 KILVTGGQGQLARCIDKLSKVYELDFSFKSSLELDITKFEALEQELNGQGYDYCINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE E+A IN +A+ + I+ISTD+VF G + P E TNP Sbjct: 63 TQVDKAESNKEVANLINHLAVDLLARLCKKYKVTLIHISTDFVFSGENSLPYLEADKTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGKSKL GE ++ + I+RT+W+YS FG+NFL SML+ +ER +SVV DQ G Sbjct: 123 LGVYGKSKLDGECRIQQNLAQFFIIRTSWLYSEFGNNFLKSMLQYGREREALSVVYDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A+ +A I++I S++ G++H + + G SW DFA IF + Sbjct: 183 TPTYAMDLAGLILKIII-----SESKSYGVYHYSNE-GVASWYDFAFAIF----KMANMD 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK----EGVRN 285 + I +++YPT A RP++S LD S++ I+I W+ E +RN Sbjct: 233 CDLNPIRSEEYPTAAKRPSFSVLDKSRVKKIFQIKIPHWQQSLSEAIRN 281 >gi|322420910|ref|YP_004200133.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18] gi|320127297|gb|ADW14857.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18] Length = 277 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 149/287 (51%), Gaps = 21/287 (7%) Query: 4 LVIGNNGQIAQSLSSM---CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV+GN G + Q L ++ + V+I +ID+ L+ P V+IN AAY Sbjct: 3 LVVGNKGMLGQDLMALYGDAARGVDI-----DEIDITDLTSVQRVLLTLKPKVVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD + PE+A +N+EG G +A + IG + +STDY+FDG P E P Sbjct: 58 TDVDGCQSNPELAMQVNSEGVGYLAMISKEIGAKLVQVSTDYIFDGKKGAPYLEDDLAGP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SKL GE + N++I+RT W+Y G NF+ +ML+LA E++E++VV DQ G Sbjct: 118 LSVYGESKLGGEMNTW-FNPNHLIVRTQWLYGHGGKNFVETMLKLAAEKKELTVVDDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A AI + D +G +H A+ G VSW FA+ IF G Sbjct: 177 SPTWTRDLALAIKALL-------DKGCQGTYH-AANSGFVSWNGFAKEIF----RLAGLD 224 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T+Q A RP YS LDC KL W++ + L Sbjct: 225 VAVLPMTTEQLGRPAPRPLYSTLDCGKLQQETGFVPQPWQDALERYL 271 >gi|169831836|ref|YP_001717818.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis audaxviator MP104C] gi|169638680|gb|ACA60186.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis audaxviator MP104C] Length = 285 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 154/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G + +++++ + ++R+GR D+D+ S + PD ++N AA Sbjct: 1 MRVLVTGAQGMLGRAVAAEAGARGWAVVRLGRTDLDITDLTAVRSALREYRPDAVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E AF++N G +A A G+ ++ISTDY+FDG P + Sbjct: 61 YTDVDGAETARERAFAVNGLGPRNLALACRETGVDLLHISTDYIFDGRKDGPYGVYDDPC 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKL GE +AS + + I+R +W+++ +G NF+ +MLRL +ER + VV DQ+ Sbjct: 121 PVNVYGASKLWGERAIASLASRFYIVRVSWLFAPWGKNFVATMLRLGRERESLRVVDDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +AR ++ + T G++H T + G SW FA I ++ G Sbjct: 181 GCPTYAPDLARLLLDLIA-------TRCYGVYHAT-NQGVTSWCGFARAIM----KQAGL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V + ++P A RPA S LD L T + W++ + L Sbjct: 229 PARVEPCTSAEFPRPARRPANSVLDPFPLRETVGYLLPPWEDALERCL 276 >gi|194098063|ref|YP_002001111.1| putative reductase [Neisseria gonorrhoeae NCCP11945] gi|193933353|gb|ACF29177.1| putative reductase [Neisseria gonorrhoeae NCCP11945] gi|317163796|gb|ADV07337.1| putative reductase [Neisseria gonorrhoeae TCDC-NG08107] Length = 283 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 162/288 (56%), Gaps = 8/288 (2%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G+ Q+A L +D E I +D+ + SF PD I+N AAYTAVD Sbjct: 1 MTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAYTAVD 60 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 KAE + AF++NA +A AA I+ISTDYVFDG + P E TNP N+Y Sbjct: 61 KAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPHQESDFTNPSNVY 120 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 G+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G PT Sbjct: 121 GQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIGCPTY 180 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--PYSK 242 A ++ AII+ L++ S+ +RGI+H A G VSW +FA +IF + ++ P + Sbjct: 181 AGDLSAAIIR----LLQQSNP-VRGIYHY-AGGKSVSWYEFARHIFQTALQQDASFPVPE 234 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 LKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 282 >gi|194334529|ref|YP_002016389.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM 271] gi|194312347|gb|ACF46742.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM 271] Length = 296 Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 9/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ + + D + ++D+ DVIIN A Sbjct: 1 MNILVTGSKGQLGSEIRDAAMLDGGLRFFFCDLAELDITDRDAVVRMCERDGIDVIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AED+ + A +N +G G +A+ A G + +STDYVF+G S P E Sbjct: 61 AYTAVDRAEDDADTAMRVNRDGPGVLAECARERGALLLQVSTDYVFNGESSVPYRECDEV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SK GEE V +Y+I RT+W+YS G+NF+ +MLRL ER E+ VV DQ Sbjct: 121 SPLGVYGQSKWEGEELVRRSGASYMIFRTSWLYSAHGNNFVKTMLRLGAERDELRVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTP A +ARA++ + + + +H + + G SW DFA I GG Sbjct: 181 VGTPCYAADLARALMHVLERV--EPGVNYAATYHFSNE-GVCSWYDFAVMIM----RLGG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + ++P K RP +S L+ K+ + + W +G+ ++ Sbjct: 234 LGCRVVPIESSEFPAKVTRPHFSVLNKGKIKADWGVDVPHWMDGLERMM 282 >gi|282880339|ref|ZP_06289053.1| dTDP-4-dehydrorhamnose reductase [Prevotella timonensis CRIS 5C-B1] gi|281305841|gb|EFA97887.1| dTDP-4-dehydrorhamnose reductase [Prevotella timonensis CRIS 5C-B1] Length = 282 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 158/289 (54%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + + Q + + ++D+ K F + D I+N A Sbjct: 1 MNILITGCNGQLGREMQRLEKQMKEHQWWNTDVDELDITDQKAIEEFVTAHEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+ ++A ++NAE +A A I ISTDYVFDG TP E Sbjct: 61 AYTAVDKAEENKQLATALNAEAPAYLAAAIAKRKGWIIQISTDYVFDGTQHTPYTETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE V +VI+RTAW+YS+ G NF+ +M++L KE+ E+ V+ DQ Sbjct: 121 CPNSVYGATKLAGEVAVRQICPEHVIIRTAWLYSVHGHNFVKTMIKLGKEKSELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ I+ I I + G +H + + G +SW DF + I + G Sbjct: 181 IGTPTYAGDLAQTIMTIIKKGI------VPGTYHYSNE-GVISWYDFTKAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V+ + T YPT A RP YS LD +K+ T++I I W+E + ++ Sbjct: 231 TTCHVHPLHTADYPTAAKRPHYSVLDKTKIKTTYDIEIPYWEESLAKMI 279 >gi|224540562|ref|ZP_03681101.1| hypothetical protein BACCELL_05476 [Bacteroides cellulosilyticus DSM 14838] gi|224517812|gb|EEF86917.1| hypothetical protein BACCELL_05476 [Bacteroides cellulosilyticus DSM 14838] Length = 285 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 157/286 (54%), Gaps = 12/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + + DV++N A Sbjct: 1 MRVLVTGANGQLGNEMQVLAKENPQHTYFFTDVQELDICDEQAVQACIAENQIDVVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N E G +A+AA + G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDNEELCRKLNQEAPGILARAAQAHGAAMIQVSTDYVFDGTAHIPYKEDCEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V +++RTAW+YSI+G+NF+ +M+RL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLGGEKEVMQNCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + I + GI+H + D G SW DF I + Sbjct: 181 IGTPTYANDLAQAIYAAINQGI------VPGIYHFS-DEGVCSWYDFTVAIHRIA---DI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 KV + T +YP KA RP YS LD +K+ T I + W+E ++ Sbjct: 231 TTCKVSPLHTDEYPAKAPRPHYSVLDKTKIKKTFGIEVPHWEESLK 276 >gi|330991365|ref|ZP_08315316.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] gi|329761384|gb|EGG77877.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] Length = 270 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 85/260 (32%), Positives = 139/260 (53%), Gaps = 2/260 (0%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 +GRP D +P PD++IN AA+TA+D AE+EP+ A N EG +A Sbjct: 1 MGRPLFDFEQPDTVVRVMQDMRPDLVINTAAWTAIDAAEEEPDRARLTNTEGPALLAWLC 60 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +P +++STD+VF G P E PT+P ++YG+S+ GE+ V + +++RT+ Sbjct: 61 AGQAVPLLHVSTDHVFSGTRGRPYRETDPTDPQSVYGRSRAEGEKAVLAACARAMVVRTS 120 Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS-DTSL 207 WVY +G NF+ +ML A ++ VV DQ G PT+A +A A++Q+A + ++ + Sbjct: 121 WVYGPYGRNFVRTMLEAACRETQLQVVADQSGHPTAAPDLADALLQVAARIRQSGWQPAY 180 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 RG+FH+ A GG +W + A + G P V + T PT A R + LDC + Sbjct: 181 RGVFHV-AGGGSATWHELASAAVAHAGRHGHPAPPVMPVMTADRPTAAARRVDARLDCGR 239 Query: 268 LANTHNIRISTWKEGVRNIL 287 + + W++ + ++ Sbjct: 240 FRQVFGLELPHWRDSLGAVV 259 >gi|116074423|ref|ZP_01471685.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9916] gi|116069728|gb|EAU75480.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9916] Length = 295 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 107/296 (36%), Positives = 151/296 (51%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + + VE+I R + DL + PD ++N AY Sbjct: 1 MKILLTGAAGQLGQALIASVPEGVELIATSRQEFDLADAEACRDAVFHHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A ++N+ A A A G + +STD+VF+G +P +P Sbjct: 61 TAVDKAESERDLAHAVNSGAPEAFANALGERGGRMLQLSTDFVFNGNQGSPYTVDQARDP 120 Query: 121 LNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 L +YG SK AGE E++ +V LRT+WV G NF L+MLRL +ER E++VV Sbjct: 121 LGVYGASKAAGEAAVQERLGRQGTGFV-LRTSWVIGPVGKNFALTMLRLHRERDELAVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G P+S L +A+A Q + I N L + H + D G SW D A + S Sbjct: 180 DQVGCPSSTLNLAQACWQAIN--INNKGVELPPVMHWS-DAGAASWYDVAVAVGDISQNL 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V I T YPT A RP+YS LDC + W+ + +IL + Sbjct: 237 GLLDQPAHVKPITTADYPTPARRPSYSLLDCCSTRAALQLPCQHWQAALHDILQRV 292 >gi|257899039|ref|ZP_05678692.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com15] gi|257836951|gb|EEV62025.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com15] Length = 283 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKK-TEALGFAIPTWQEALAQML 275 >gi|134094386|ref|YP_001099461.1| TDP-rhamnose synthetase, NAD(P)-binding [Herminiimonas arsenicoxydans] Length = 271 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 101/269 (37%), Positives = 146/269 (54%), Gaps = 13/269 (4%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 EI+ + R +DL S P +IINPAAYTAVD AE P++A INA+ G + Sbjct: 3 EIVALDRQQMDLANLDQVRDVIRSVKPQLIINPAAYTAVDLAESAPDLAMRINADAPGVM 62 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A A +G I+ STDYVFDG E +P ++YG+SKLAGE+ + + ++I Sbjct: 63 AAEAKKLGAAMIHYSTDYVFDGDKAESYTEEDVPHPQSVYGRSKLAGEQAIQAAGIPHLI 122 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI----ARAIIQI----- 195 LRT+W+Y + G NFLL++ RLA+ER E+ +V DQFG PT + + A AI Q+ Sbjct: 123 LRTSWIYGLRGKNFLLTVQRLAQERDELRIVADQFGAPTWSRTLAEVTAHAICQLQGGGT 182 Query: 196 AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 N+ + ++ G++H+TA G SW F + I S+ P KV I T+ YP A Sbjct: 183 QANVDHAAWSAHSGLYHVTAQGR-TSWHGFTQAIIAHSSGLKQP--KVTPIATQDYPLPA 239 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVR 284 RP S L + R+ W+ ++ Sbjct: 240 KRPQNSVLSSQRFMQAF-CRLPEWEAALK 267 >gi|317048790|ref|YP_004116438.1| dTDP-4-dehydrorhamnose reductase [Pantoea sp. At-9b] gi|316950407|gb|ADU69882.1| dTDP-4-dehydrorhamnose reductase [Pantoea sp. At-9b] Length = 295 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 108/294 (36%), Positives = 156/294 (53%), Gaps = 11/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L + + R +D P A L PDVI+N Sbjct: 1 MNILLFGRNGQVGWELQRSLAPLGNVTVLDRHSVDYCGDFENPAGIAESILKIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVDKAE + E A +NA A+A+AA I ++ STDYVFDG TP E Sbjct: 61 ATAYTAVDKAETDVEKARLVNATSVQAMAEAAKKINALVVHYSTDYVFDGSGTTPWTETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN YG +K GEE + + + Y+I RT+WVY+ G+NF +M+RLA++R +SV+ Sbjct: 121 TTAPLNTYGLTKREGEEAIIAAASKYLIFRTSWVYAAKGNNFAKTMIRLAQDREALSVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT A IA AH + + +D + G++H+ A G +W +AE + + Sbjct: 181 DQYGAPTGAELIADC---TAHAIQLTLADPNKSGVYHLIA-SGITTWHAYAETVIDYVRQ 236 Query: 236 RGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G P V ++ T +PT A RP+ S L+ K + + + WK GV +L Sbjct: 237 KGLPLKVEVVNKVATSAFPTPAKRPSNSRLNTEKFTSAFQLNLPDWKLGVIRML 290 >gi|212694336|ref|ZP_03302464.1| hypothetical protein BACDOR_03862 [Bacteroides dorei DSM 17855] gi|212662837|gb|EEB23411.1| hypothetical protein BACDOR_03862 [Bacteroides dorei DSM 17855] Length = 287 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + + ++D+ + DVI+N AA Sbjct: 2 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 62 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFQGDKNIPCRESWETD 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 122 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I +N+IE + +G++H + + G SW DFA+ E E G Sbjct: 182 GTPTYAGDLAALI----YNIIEENLLDRQGVYHFSNE-GVCSWYDFAK----EICELSGN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 233 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 283 >gi|83859879|ref|ZP_00953399.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83852238|gb|EAP90092.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 292 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+A+SL++ +DV ++ GR DL P + P +IN AAYTA Sbjct: 10 LIFGKSGQLARSLAAQARCEDVSLLCAGRDIADLTIPGHARALIERLQPRFVINAAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AEDE + +INA+ G +AKA S G I++STDYVF+G S TP E S +P+N Sbjct: 70 VDRAEDETLLCNAINADAPGEMAKACASQGSRFIHVSTDYVFNGESDTPYTEDSEPDPIN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKL GE K + + I+RT+ V+S G +F +L LA R + +V DQ P Sbjct: 130 FYGQSKLEGELKALNSYDQTTIVRTSAVFSGLGDDFPCKILNLAASRETLRIVDDQITGP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYS 241 T A ++AR + +A + S G+FH G P VSWA FA + G + Sbjct: 190 TPAAELARRLFALARS------PSAYGVFHCA--GQPFVSWAGFAAAFLEQEGSAIG--T 239 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + +++YPT+A RP S L +L + W++ + +L Sbjct: 240 RVIPVSSEEYPTRARRPKRSRLGGDRLKEATGLHSPQWQQSLGLML 285 >gi|167461463|ref|ZP_02326552.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 284 Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 161/288 (55%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ +++ M + E+ +GR D+D+ P+ S P+ +++ AA Sbjct: 1 MKILITGAEGQLGREAVQLMKSRGHEVHGMGRGDLDVADPRSCMSVIDRLRPEAVLHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + + A +NA G+ +A AA+ G YISTDYVFDG + +P Sbjct: 61 YTAVDRAETDADTASKVNALGSRNVAAAAECAGAKLCYISTDYVFDGCADSPYGTDVLPF 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++KL GE S ++ ++RT+WVY +GSNF+ +MLRL +E R+++VV DQF Sbjct: 121 PLNVYGRTKLEGEHWTLSLSSRPFVVRTSWVYGQYGSNFVKTMLRLGQEGRKLTVVNDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + Q+ T G++H ++ G SW FA+ IF ES G Sbjct: 181 GCPTYTADLAGLLEQLLQ-------TDRYGVYH-ASNSGACSWYGFAKAIFEES---GLD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S ++ +++Y A RP+YS L L + + W+E +R + Sbjct: 230 QSLLHPCSSEEYRQLARRPSYSVLSPDSLTDRGFKPLRPWREALREFI 277 >gi|206968407|ref|ZP_03229363.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1134] gi|206737327|gb|EDZ54474.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1134] Length = 246 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 136/238 (57%), Gaps = 12/238 (5%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +II+ AAYT VD AE E + A+ INA GA +A A+ +G +YISTDYVF G Sbjct: 16 PHIIIHCAAYTKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPD 75 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER Sbjct: 76 GYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERD 135 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 EISVV DQ G+PT + I ++ H TSL G +H++ + G SW +FA+ IF Sbjct: 136 EISVVADQVGSPTYVADLNMVINKLIH-------TSLYGTYHVS-NSGSCSWFEFAQKIF 187 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 188 SYANMK----VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFI 241 >gi|257885217|ref|ZP_05664870.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,501] gi|260560528|ref|ZP_05832702.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium C68] gi|261206557|ref|ZP_05921257.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TC 6] gi|289565467|ref|ZP_06445916.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium D344SRF] gi|293553224|ref|ZP_06673861.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1039] gi|293560230|ref|ZP_06676730.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1162] gi|293568260|ref|ZP_06679584.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1071] gi|294614671|ref|ZP_06694573.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1636] gi|294619032|ref|ZP_06698527.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1679] gi|314940007|ref|ZP_07847200.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a04] gi|314941885|ref|ZP_07848749.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133C] gi|314950065|ref|ZP_07853352.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0082] gi|314952412|ref|ZP_07855418.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133A] gi|314993219|ref|ZP_07858599.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133B] gi|314997809|ref|ZP_07862721.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a01] gi|257821069|gb|EEV48203.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,501] gi|260073530|gb|EEW61858.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium C68] gi|260079267|gb|EEW66958.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TC 6] gi|289162796|gb|EFD10647.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium D344SRF] gi|291588972|gb|EFF20796.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1071] gi|291592409|gb|EFF24016.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1636] gi|291594693|gb|EFF26075.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1679] gi|291602634|gb|EFF32849.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1039] gi|291605802|gb|EFF35236.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1162] gi|313588181|gb|EFR67026.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a01] gi|313592300|gb|EFR71145.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133B] gi|313595455|gb|EFR74300.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133A] gi|313599310|gb|EFR78155.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133C] gi|313640740|gb|EFS05320.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a04] gi|313643600|gb|EFS08180.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0082] Length = 283 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|29345875|ref|NP_809378.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|29337768|gb|AAO75572.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] Length = 284 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 150/286 (52%), Gaps = 14/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD---VIINP 57 M LV G NGQ+ + C+ + D+ L D + D VI+N Sbjct: 1 MNILVTGANGQLGNEMR--CIAATSLNNYIFTDVAELDITDLDAIRNMIHLDNIKVIVNC 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT VDKAED+ ++A +N + +A AA + I+ISTDYVF G P E Sbjct: 59 AAYTNVDKAEDDYDMADLLNNKAVENLAIAAKEVNATLIHISTDYVFQGDKNMPCGEDCE 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNPL IYGK+K AGE+ + NY+I RTAW+YS FG NF+ +M +L ++ ++ VV D Sbjct: 119 TNPLGIYGKTKRAGEQSIQRVGCNYLIFRTAWLYSQFGKNFVKTMRQLTADKDKLRVVFD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A I + +IE +GI+H + + G SW DFA+ E E Sbjct: 179 QIGTPTYAKDLA----DIIYRVIEGDQYHKQGIYHFSNE-GVCSWYDFAK----EICELS 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G + + ++P+K RP +S LD +KL + I WK+ + Sbjct: 230 GNSCDIQPCHSDEFPSKVKRPHFSVLDKTKLKLAFGVEIPYWKDSL 275 >gi|218232620|ref|YP_002366003.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus B4264] gi|218160577|gb|ACK60569.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus B4264] Length = 246 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/238 (39%), Positives = 137/238 (57%), Gaps = 12/238 (5%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +II+ AAYT VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G Sbjct: 16 PHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPD 75 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER Sbjct: 76 GYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERD 135 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 EISVV DQ G+PT + I ++ H TSL G +H++ + G SW +FA+ IF Sbjct: 136 EISVVADQVGSPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIF 187 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 188 SYANMK----VHVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFI 241 >gi|169351577|ref|ZP_02868515.1| hypothetical protein CLOSPI_02357 [Clostridium spiroforme DSM 1552] gi|169291799|gb|EDS73932.1| hypothetical protein CLOSPI_02357 [Clostridium spiroforme DSM 1552] Length = 280 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 154/291 (52%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C + D++ I V ++D+ K S + D +I+ AA Sbjct: 1 MKLLVTGVKGQLGYDIVNECKRRDIDAIGVDVEEMDITDAKKVDEVIKSGNYDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E +N +G IA + IP +Y STDYVFDG P E+ Sbjct: 61 WTAVDKAEDEVEACTKVNVDGTKNIANVCKELNIPMMYFSTDYVFDGQGDQPWHEYDKRY 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + ++ I+R AWV+ + G+NF+ +MLRL KER +SVV DQ Sbjct: 121 PLNVYGQTKYEGELAVEALEKHF-IVRIAWVFGVNGNNFIKTMLRLGKERGAVSVVNDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T G +H T + G SW +FA IF ++ Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGTYHATNE-GLCSWYEFACEIF----KQAKL 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + L R+ TW++ +R L I Sbjct: 228 DVEVTPVDSNAFPAKAKRPNNSRMSKEMLDKNGFDRLPTWQDALRRYLKEI 278 >gi|253567876|ref|ZP_04845287.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|251841949|gb|EES70029.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 286 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 150/286 (52%), Gaps = 14/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD---VIINP 57 M LV G NGQ+ + C+ + D+ L D + D VI+N Sbjct: 1 MNILVTGANGQLGNEMR--CIAATSLNNYIFTDVAELDITDLDAIRNMIHLDNIKVIVNC 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT VDKAED+ ++A +N + +A AA + I+ISTDYVF G P E Sbjct: 59 AAYTNVDKAEDDYDMADLLNNKAVENLAIAAKEVNATLIHISTDYVFQGDKNMPCGEDCE 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNPL IYGK+K AGE+ + NY+I RTAW+YS FG NF+ +M +L ++ ++ VV D Sbjct: 119 TNPLGIYGKTKRAGEQSIQRVGCNYLIFRTAWLYSQFGKNFVKTMRQLTADKDKLRVVFD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A I + +IE +GI+H + + G SW DFA+ E E Sbjct: 179 QIGTPTYAKDLA----DIIYRVIEGDQYHKQGIYHFSNE-GVCSWYDFAK----EICELS 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G + + ++P+K RP +S LD +KL + I WK+ + Sbjct: 230 GNSCDIQPCHSDEFPSKVKRPHFSVLDKTKLKLAFGVEIPYWKDSL 275 >gi|310644247|ref|YP_003949006.1| dtdp-4-dehydrorhamnose reductase [Paenibacillus polymyxa SC2] gi|309249198|gb|ADO58765.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus polymyxa SC2] Length = 290 Score = 171 bits (434), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 161/290 (55%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G +GQ+ + + ++ Q ++ R +D+ + + P+ II+ AA Sbjct: 1 MRILVTGASGQLGKDVVNVFQGQGHDVWGYDREQLDITDLEQVVKIVGQYQPNAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G +A AA+ G +YISTDYVFDG + E+ TN Sbjct: 61 YTAVDAAESDIDTAYQVNATGTRNMALAAEKTGAKLVYISTDYVFDGTAEGLYHEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSK AGE + ++ Y I+RT+WVY + G+NF+ +ML+L +E+ + VV DQ Sbjct: 121 PQSIYGKSKRAGEVLTQTLSSRYFIVRTSWVYGLHGNNFVKTMLKLGQEKPNLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR + ++ T GI+H ++ G +W +F + I ++AE Sbjct: 181 GSPTYTVDLARFLAELIQ-------TEKYGIYH-ASNSGSCTWYEFTQAILQDAAELFAV 232 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V T+Q+P A RP S L+ + + + W++G+R+ L Sbjct: 233 KITANVEPCSTEQFPRPAARPRNSVLEHIAIRSNGFHVLQDWRKGLRDFL 282 >gi|291513884|emb|CBK63094.1| dTDP-4-dehydrorhamnose reductase [Alistipes shahii WAL 8301] Length = 286 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 113/293 (38%), Positives = 162/293 (55%), Gaps = 12/293 (4%) Query: 1 MKCLVIGNNGQIA---QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M LV G NGQ+ Q LS++ + V ++D+ +VI+N Sbjct: 1 MNILVTGANGQLGREMQRLSAVSPNNYTFTDVA--ELDVTDAGAVRQAVAQTRAEVIVNC 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V++AE++ E A +N A +A+AA++ G I++STDYVFDG + P E +P Sbjct: 59 AAYTNVERAEEDEEAADRLNRGAAENLARAAEANGATLIHVSTDYVFDGTAHLPYTEDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T PL +YG++KLAGE VA Y+ RTAW+YS +G+NFL +MLRL E+ ++VV D Sbjct: 119 TAPLGVYGRTKLAGERAVAESGCKYLTFRTAWLYSEYGNNFLKTMLRLTAEKERLNVVFD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A I I + G++H + + G SW DFA I +A G Sbjct: 179 QAGTPTYAGDLAMTIFSIVEGGYFAGN---EGLYHFSNE-GVASWYDFAAEI---AAAAG 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ T ++PTKA RPAYS LD SK+ T + I W+E + L N+ Sbjct: 232 HDKCRIRPCRTAEFPTKAARPAYSVLDKSKIKETFGLEIPHWRESMLYCLKNM 284 >gi|325268093|ref|ZP_08134739.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] gi|324980478|gb|EGC16144.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] Length = 302 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 108/288 (37%), Positives = 168/288 (58%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQI + L+++ ++ R +D+ + D L+F PDVIIN AAY Sbjct: 13 MKYLITGAGGQIGRRLTALLHGKADVFAADRRTLDITRRDDVLQAALAFRPDVIINAAAY 72 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE EPE AF++NA GA +A+AA ++G + ISTDYVF G P E +P Sbjct: 73 TAVDDAEREPEAAFAVNAAGAAHLAQAAQTVGAAMVQISTDYVFGGHRAAPYRETDLPSP 132 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG+SK AGE+ V + ++I+RTAWV+ G NF+ ++L+L + + ++VV DQ G Sbjct: 133 LNVYGQSKYAGEQAVQAACARHLIVRTAWVFGKHGGNFVKTLLQLGRRQPVLNVVDDQRG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A A A++ +A+ ++ + + G++H D VS +FA + ++A +G Sbjct: 193 NPTYADDAAAALLHMANQSVQGN--AAWGVYHFAGDTA-VSRDEFARAVLVQAAAQGLLP 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + ++ YP+ A RPA S LDC K+ I S W+ + ++ Sbjct: 250 RVPEVRPVSSRDYPSAAERPADSRLDCRKVQAAFGIAPSDWRAALHDL 297 >gi|218288133|ref|ZP_03492432.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] gi|218241492|gb|EED08665.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + L + DVE+I R ++D+ + + PDV+I+ AA Sbjct: 1 MKILVTGAGGQLGRELVRYPKLADVEMIGCTRAEMDVTHLEAVREKLRAVRPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE P A+ +NA G +A AA+ +G YISTDYVFDGL+ P +E+ TN Sbjct: 61 YTKVDLAESCPADAYRVNALGTRNVAVAAEEVGAKVCYISTDYVFDGLTDRPYNEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK AGE V + + I+RT+WV+ +G NF+ ++L A+ + VV DQ Sbjct: 121 PLSVYGKSKRAGEILVQGLCSRWFIVRTSWVFGKYGPNFVKTILTKARAGEPLRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR +I + T GI+H T + G SW +FA I E+A Sbjct: 181 GSPTYTKDLARFLIDLVR-------TEAYGIYHAT-NQGQCSWYEFACAILEEAAVT--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + T +P A RP +S L + L + W++ ++ L Sbjct: 230 -TAIEPCTTDAFPRPAPRPKFSVLAQTMLLAEGFTPLRPWRDALQEFL 276 >gi|315033454|gb|EFT45386.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0017] Length = 299 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 159/290 (54%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D +K +I TW+E + +L N+ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLNK-TEALGFKIPTWQEALAQMLENV 297 >gi|301060716|ref|ZP_07201531.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] gi|300445113|gb|EFK09063.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] Length = 291 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 20/286 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + + +D + VG +D+ K +F + PDV++N AA+ Sbjct: 1 MKILITGGTGQLGRDCEKVLAKDQNVTAVGSSALDVSDRKAVDAFIGNLKPDVVLNCAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----S 116 T VD E + E A+ IN G +A AA + G ++ISTDYVFDG R PI E+ Sbjct: 61 TRVDDCETQKEPAWKINVVGPKNLATAARASGSRLVHISTDYVFDG--RKPIPEYYTESD 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA--KERREISV 174 +P + YG SKL GE+ VA T+ Y ILRTAW+Y FG NFL +ML+LA +REI V Sbjct: 119 RPHPTSYYGFSKLEGEKAVALATDRYTILRTAWLYGAFGRNFLKTMLKLAVGDPQREIKV 178 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQFG+PT + +A +QI ++ + + G+FH T++G +W D A+ E Sbjct: 179 VHDQFGSPTWSYMLA---VQIKRVILAD----VSGLFHATSEGY-CTWYDLAKTFLHEME 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V T+ YPT A RPA S L+ +L + + W+ Sbjct: 231 VPAA----VVPCTTRDYPTPAKRPANSILENRRLKDEGLNIMQDWR 272 >gi|119775374|ref|YP_928114.1| dTDP-4-dehydrorhamnose reductase [Shewanella amazonensis SB2B] gi|119767874|gb|ABM00445.1| dTDP-4-dehydrorhamnose reductase [Shewanella amazonensis SB2B] Length = 301 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 167/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G++GQ+ ++L + +++ GR ++D L+P+ + L P ++IN AAY Sbjct: 1 MRVLLLGSSGQVGRALLAFKPAGYKLLVPGRSEVDYLQPESITDYVLFHKPQLVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + IN+ +AKAA + +++STDYVFDGL P +E P Sbjct: 61 TAVDKAEAETALCTRINSGACEHLAKAAAAADAVLLHLSTDYVFDGLLDRPYNEEDSPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SK GE+ + + ++I+RT+W++ +NF+ +MLRLA R E+ VV DQ G Sbjct: 121 LSVYGHSKWLGEQTIVANCAKHLIVRTSWIFDADSNNFVNTMLRLAASRSELRVVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT A ++ARAI Q+A +E + G++H + G P VSW +FA I E+ Sbjct: 181 GPTPASELARAIWQLARQSVERNGP--WGVYHFS--GQPFVSWYEFARSILTEAYRLCVI 236 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I ++ + A RPA S LD SK+ + + + W+ + NIL Sbjct: 237 HQLPTITSISASEFGSPAQRPANSRLDGSKIKALYGVAAADWQSELVNIL 286 >gi|315166503|gb|EFU10520.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1341] Length = 299 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + Q +E + ++D+ + P+VI + AAYTA Sbjct: 22 LITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYTA 81 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NP 120 VDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG + + NP Sbjct: 82 VDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPNP 141 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQFG Sbjct: 142 LNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQFG 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 202 RPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE------ 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L ++ Sbjct: 249 VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLESV 297 >gi|328948132|ref|YP_004365469.1| dTDP-4-dehydrorhamnose reductase [Treponema succinifaciens DSM 2489] gi|328448456|gb|AEB14172.1| dTDP-4-dehydrorhamnose reductase [Treponema succinifaciens DSM 2489] Length = 319 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/314 (34%), Positives = 160/314 (50%), Gaps = 37/314 (11%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFS------------- 50 +IG G + ++ ++ +I +G D+D+ P + + F + Sbjct: 4 LIGYKGMLGSEIAKQLTEN-KIDWIGSDKDVDITNPAELSKFAHNHGTAAGRTGISVARG 62 Query: 51 --PDVI---INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 P+ I IN AAYTAVDKAE++ E+A +NAEG IA+ +G I+ISTDYVFD Sbjct: 63 TVPEKITWVINCAAYTAVDKAEEDSELAEKLNAEGPKNIARITRELGAKLIHISTDYVFD 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G P E P ++YG++K AGE+ V Y ILRTAW+Y G NF+ +M + Sbjct: 123 GTGNFPYTEDMLKCPDSVYGRTKAAGEDFVEKEMTQYYILRTAWLYGFDGKNFVYTMTKA 182 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQI------AHNLIENSDTSLRGIFHMTADGGP 219 + E+SVVCDQ GTPT A+ +A AI++I A +L G++H T + G Sbjct: 183 MNSKDEVSVVCDQKGTPTCAVDLASAILKIMSTSEKAKSLFGKKSALPYGVYHFT-NLGE 241 Query: 220 VSWADFAEYIFWESAERGGPYSKVYR------IFTKQYPTKAHRPAYSCLDCSKLANTHN 273 +W DF + I+ E G Y ++ + T +YP A RPAYS L K+ Sbjct: 242 TTWFDFTKKIY----EFGKKYGRITKDCTINSCTTDEYPCAAKRPAYSVLSKDKIQTLLK 297 Query: 274 IRISTWKEGVRNIL 287 I+I W+E + + Sbjct: 298 IKIPEWQETLEKFI 311 >gi|21227270|ref|NP_633192.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1] gi|20905619|gb|AAM30864.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1] Length = 269 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 155/287 (54%), Gaps = 28/287 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L+IG++G + S +C + +++ D+D+ + L PDV+IN AAY Sbjct: 6 IKTLIIGSSGMLG---SDLCKVFPDAVKLTHHDLDITDREQVIESILKIKPDVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD ED E+AF +N G G IA+A G ++ STDYVFDG + ++ P +P Sbjct: 63 TNVDGCEDNKELAFQVNGSGPGYIAEACARAGAKLVHFSTDYVFDGSKKEYVESDIP-DP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SKL GE+K+ ++Y I+R +W++ I G NF+ +ML+L+ E + VV DQFG Sbjct: 122 INVYGDSKLLGEKKIIENMDDYRIVRISWLFGIHGKNFVETMLKLSGEMDTVKVVNDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +AR + +I IE GI+H+T D G SW +FA I Sbjct: 182 KPTYTMDLARKVKEI----IELE----PGIYHITND-GICSWYEFASSII---------- 222 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V ++++ KA RP YS L NT + W+E +++ L Sbjct: 223 DNVIPCTSEEFQRKAKRPMYSV-----LVNTKTGPMRHWREALKDYL 264 >gi|237727665|ref|ZP_04558146.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D4] gi|229434521|gb|EEO44598.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei 5_1_36/D4] Length = 286 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I +N+IE + +G++H + + G SW DFA+ E E G Sbjct: 181 GTPTYAGDLAALI----YNIIEENLLDRQGVYHFSNE-GVCSWYDFAK----EICELSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|237732731|ref|ZP_04563212.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229384197|gb|EEO34288.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 280 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 157/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C +++E + V ++D+ A S + + +I+ AA Sbjct: 1 MKLLVTGVKGQLGHDIVNECNNRNIEAVGVDVEEMDITDAGKVAEVIKSGNYNAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E+ +N +G IA + IP +Y STDYVFDG T E+ + Sbjct: 61 WTAVDKAEDEVELCTKVNVDGTRNIANICKELDIPMMYFSTDYVFDGQGETEWKEYDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V S ++ I+R AWV+ I G+NF+ +MLRL KER + VV DQ Sbjct: 121 PLNVYGQTKYEGELIVESLPKHF-IVRIAWVFGINGNNFIKTMLRLGKERGAVCVVDDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T GI+H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGIYHATNE-GLCSWYEFACEIF----KQAGM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + + L R+ TW++ + L I Sbjct: 228 SVEVTPVDSNAFPAKAKRPNNSRMSKAMLDKNGFGRLPTWQDALSRYLKEI 278 >gi|326391870|ref|ZP_08213382.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW 200] gi|325992088|gb|EGD50568.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW 200] Length = 298 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 105/303 (34%), Positives = 155/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 M+ L+ G GQ+A L S+ ++ I ++D+ K F Sbjct: 1 MRLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFVD 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PDVIIN AAYT VDK E + + AF +NA G +A AA IG +++STDYVF+G Sbjct: 61 EYRPDVIINCAAYTNVDKCESDIDTAFKVNAIGPRNLAIAAQKIGARLLHVSTDYVFNGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L+ AK Sbjct: 121 GDIPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAHHILKLVL-------TEEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G V I + + A RP YS LD L T + W++ ++ + Sbjct: 233 KI----VEYAGINCTVVPITSDKIDRPAKRPFYSSLDNMMLRCTIGDEMRNWEDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 EDL 291 >gi|329960133|ref|ZP_08298597.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] gi|328533085|gb|EGF59858.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] Length = 282 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 14/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++++ ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMQVLSRENLQHTYFFTDVQELDICDEQAVRAFVADNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNAELCDKLNHLAPGYLASAAEACGAALIQVSTDYVFDGTGHIPYTEEMTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V + +I+RTAW+YS++G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGSTKLDGERAVMEKCSRAMIIRTAWLYSVYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 GTPT A +A I + I H ++ GI+H + D G SW DF I + G Sbjct: 181 IGTPTYAKDLACVIFEAINHGIVP-------GIYHFS-DEGVCSWYDFTLAIHRIA---G 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV + T ++P KA RP YS LD +K+ T I I W+E + Sbjct: 230 ISTCKVSPLHTDEFPAKAPRPNYSVLDKTKIKKTFGIEIPHWEESL 275 >gi|15077648|gb|AAK83291.1|AF355468_2 DTDP-4-dehydrorhamnose reductase [Saccharopolyspora spinosa] Length = 305 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 109/293 (37%), Positives = 159/293 (54%), Gaps = 15/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII--RVGRPDIDLLKPKDFASFFLSFSPD------ 52 + LV G GQ+ L+ + + R G ++D+ ++ A SF+ Sbjct: 4 LAVLVPGGRGQLGSELARILAARTGALVHRPGSGELDVTDAEEVADALGSFAETAKDAEL 63 Query: 53 --VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 V+IN AAYTAVD AE +P+ A INAEGA ++AKA S G+P +++STDYVF G Sbjct: 64 RPVVINAAAYTAVDAAESDPDRAARINAEGAASLAKACRSSGLPLVHVSTDYVFPGDGAR 123 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P + PT P ++YG++KL GE V ++RTAWVY G NFL +M+RL+ ER Sbjct: 124 PYEPTDPTGPRSVYGRTKLEGERAVLESGARAWVVRTAWVYGASGKNFLKTMIRLSGERD 183 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +SVV DQ G+PT A +A ++++A + E + + H T + G V+W +FA IF Sbjct: 184 TLSVVDDQIGSPTWAADLASGLLELAERVAERRGPEQK-VLHCT-NSGQVTWYEFARAIF 241 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE G ++V+ T +P AHRPAYS L + TW+E + Sbjct: 242 ---AEFGLDENRVHPCTTADFPLPAHRPAYSVLSDVAWREAGLTPMRTWREAL 291 >gi|294775786|ref|ZP_06741288.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] gi|294450372|gb|EFG18870.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] Length = 286 Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVRNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I +N+IE + +G++H + + G SW DFA+ E E G Sbjct: 181 GTPTYAGDLAALI----YNIIEENLLDRQGVYHFSNE-GVCSWYDFAK----EICELSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|163740060|ref|ZP_02147464.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis BS107] gi|161386691|gb|EDQ11056.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis BS107] Length = 282 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A+ L++ D + + R DL P A + +P +IN AAYT V Sbjct: 3 LVFGKTGQVARELAA----DETVTCLSRDQADLTDPAACAEVIRAHAPAAVINAAAYTVV 58 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE E ++A IN G +A+ ++GIP + +STDYVFDG +P P PLN Sbjct: 59 DRAEAEEDLATLINGTTPGVMAETCATLGIPFVTLSTDYVFDGKGSSPWHPDEPVAPLNA 118 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SK GE V +VILRT+WV S GSNF+ +MLRL KER + VV DQ G PT Sbjct: 119 YGRSKQLGEAAVRLTGGTHVILRTSWVVSAHGSNFVKTMLRLGKERERMRVVADQIGAPT 178 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSK 242 A IA A I+IA LI + + S G +H G P SWA A IF E+ Sbjct: 179 PARAIAAACIEIARQLIADPEKS--GTYHFA--GQPETSWAGVATEIFTEAEI----PCA 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W+ G+++IL ++ Sbjct: 231 VAEIPSSAYPTAAPRPLNSRLDCSTLERVFGITRPDWQAGLKDILKDL 278 >gi|146283215|ref|YP_001173368.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|145571420|gb|ABP80526.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 278 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 112/260 (43%), Positives = 158/260 (60%), Gaps = 10/260 (3%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 + +I +G+ ++D+ P+ A+ +PD+IIN AAYTAVD AE++ E A+ +N +GA Sbjct: 1 MHVIGLGKAELDVSCPRSVANAVQLANPDLIINAAAYTAVDAAEEQVEAAYRVNRDGAHQ 60 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A GIP ++STDYVFDG P E TNP+++YG SK AGE +V + ++ Sbjct: 61 LAKEAQRHGIPLFHLSTDYVFDGALARPYVESDQTNPISVYGASKRAGELQVQQF-EKHL 119 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ILRT+WV+ GSNF+ +MLRLA E E+ VV DQ G PTSA +IA ++ +A L + Sbjct: 120 ILRTSWVFGRHGSNFVKTMLRLAGE-TELRVVDDQVGCPTSADRIASVLLDLA--LRYQA 176 Query: 204 DTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR---IFTKQYPTKAHRPA 259 D L G++H ++ SW +FA+ IF E A R G R I T+ YPT A RPA Sbjct: 177 DGKLPWGLYHYSSQPA-CSWFEFAQAIF-EQAVRAGIVRHPPRLTPIATEAYPTPAKRPA 234 Query: 260 YSCLDCSKLANTHNIRISTW 279 +S LDCS+ I + W Sbjct: 235 WSVLDCSRFTEAFGIPPALW 254 >gi|313159019|gb|EFR58394.1| dTDP-4-dehydrorhamnose reductase [Alistipes sp. HGB5] Length = 286 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 118/294 (40%), Positives = 160/294 (54%), Gaps = 14/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP---DVIINP 57 M L+ G NGQ+ +SL + V D+ L D A+ + DVI+N Sbjct: 1 MNILITGANGQLGRSLRRL--GGVSPHNYLFTDVAELDITDAAAVLRTVEERRIDVIVNC 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V++AE++ A +N + AG +A AA + G ++STDYVFDG + TP E Sbjct: 59 AAYTDVERAEEDEPTAELLNHKAAGNLAAAAKATGATLFHVSTDYVFDGTAHTPYTEDGT 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL YG++KLAGE V + Y+I RTAW+YS +G+NFL +MLRL ER + VV D Sbjct: 119 PSPLGAYGRTKLAGERAVMASGCRYLIFRTAWLYSEYGNNFLKTMLRLTSERDTLQVVFD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 Q GTPT A +A AI I IE+ G++H T D G SW DFA I +A Sbjct: 179 QIGTPTYAGDLALAIFSI----IESERYAGNEGVYHFT-DEGVCSWYDFATEI---AAAA 230 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + T ++PTKA RPAYS LD +K+ T + I W+E + L I Sbjct: 231 GHDSCHIIPCHTSEFPTKAARPAYSVLDKTKIKTTFQMDIPHWRESMIYCLKQI 284 >gi|227529355|ref|ZP_03959404.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus vaginalis ATCC 49540] gi|227350728|gb|EEJ41019.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus vaginalis ATCC 49540] Length = 283 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G +GQ+ L + + + G ++D+ + F P V+ + AAY Sbjct: 3 KILITGAHGQLGTELCHLLDEKKIAYDACGSKELDITDQNQVKAKFAELKPAVVFHCAAY 62 Query: 61 TAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + + +N +G +A AA SIG +YISTDYVFDG + + TN Sbjct: 63 TAVDKAEDEAKNLNWQVNEDGTKNVATAAQSIGATMVYISTDYVFDGTNEGEYQVDASTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KL GEE V S + Y I+RT+WV+ +G NF+ +MLRLAK ++VV DQ Sbjct: 123 PKNEYGKAKLTGEEAVKSIMDRYYIIRTSWVFGEYGKNFVYTMLRLAKTHDHLTVVDDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I G + ++ DG +W +FA I P Sbjct: 183 GRPTWTRTLAEFMLYAVEHQIP------YGTYQLSNDGS-CTWYEFAREILKNEKVEVSP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + +YP KA+RP +S + K+ T + TW+E + + Sbjct: 236 ------VTSAEYPQKAYRPRHSIMSLDKVKAT-GFEVPTWQEALGRFM 276 >gi|254478581|ref|ZP_05091955.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM 12653] gi|214035510|gb|EEB76210.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM 12653] Length = 298 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/303 (33%), Positives = 155/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 M+ L+ G GQ+A L S+ ++ I ++D+ K F Sbjct: 1 MRLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFID 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VDK E + + AF +NA G +A AA +G ++I+TDYVF+G Sbjct: 61 EYKPDIIINCAAYTNVDKCESDVDAAFKVNAIGPRNLAMAAQRVGAKLLHIATDYVFNGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L+ AK Sbjct: 121 GNVPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAYHILKLVL-------TEEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E G V I + + A RP YS LD L T + W++ ++ + Sbjct: 233 KI----VEYAGINCTVVPITSDKINRPAKRPFYSSLDNMMLRCTIGDEMRNWEDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 EDL 291 >gi|110596875|ref|ZP_01385165.1| dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] gi|110341562|gb|EAT60022.1| dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] Length = 290 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/293 (35%), Positives = 152/293 (51%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLS--SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L S PD+D+ S I+N A Sbjct: 1 MNILVTGSRGQLGSELQRVSGLTGSHHYYFYDLPDLDITNAAQVEEICRLHSIQAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + AF +N +G +A+ A ++ISTDYVF+G S +P E Sbjct: 61 AYTAVDKAESDSASAFLVNRDGPAVLARCAKDRNALLVHISTDYVFNGESNSPYRESDRV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P ++YG SK GEE V +++I+RT+W+YS +GSNF+ +MLRL E+ ++VV DQ Sbjct: 121 SPASVYGLSKWEGEEAVRRIGPSHLIIRTSWLYSPYGSNFVKTMLRLGAEKSSLTVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGPVSWADFAEYIFWESAERG 237 GTPT A +A AI I ++ D S G + ++ G SW DFAE I E Sbjct: 181 IGTPTCAADLASAIASI----LDRCDLSHCYGETYHYSNEGVCSWYDFAEAIM----ELA 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + + +YPT A RP +S L+ S + + + I W+ + +L I Sbjct: 233 GLSCRVLPVESSEYPTLARRPGFSVLNKSAIKKSWGVEIPHWRSSLATMLREI 285 >gi|167563826|ref|ZP_02356742.1| dTDP-4-dehydrorhamnose reductase [Burkholderia oklahomensis EO147] Length = 298 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 114/289 (39%), Positives = 146/289 (50%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ LS +I + R DL +P+ A PD ++N AAY Sbjct: 1 MKILVTGANGQVGWELSRSLAVLGPVISLTREQADLGRPETLARIVEEARPDAVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG P E PT P Sbjct: 61 TAVDAAESDVASANRINGEAVGVLAAATKRVGGLFVHYSTDYVFDGSKPEPYVETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLA +R E+SVV DQFG Sbjct: 121 VNAYGASKLQGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLANQREELSVVADQFG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIF--WESAER 236 PT A IA +A + E D GI+HMT+ G SW FA+ W + Sbjct: 181 APTWARSIADGTAHALATAMRERRDGGFASGIYHMTSM-GRTSWHGFADAAVASWRATPG 239 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + K+ I + YP A RP S L L I + W+ V Sbjct: 240 AAPLAVGKIAPIPSSAYPLPAKRPTNSVLSNDALKARFGIELPDWRYAV 288 >gi|257791795|ref|YP_003182401.1| dTDP-4-dehydrorhamnose reductase [Eggerthella lenta DSM 2243] gi|257475692|gb|ACV56012.1| dTDP-4-dehydrorhamnose reductase [Eggerthella lenta DSM 2243] Length = 300 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 29/304 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + D E++ ++D+ +F Sbjct: 1 MRILVTGGNGQLGNELQRILREGRSEIGSIPGVYADAEVVATDVAELDVTDADAVMAFVA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA++ G + +STDYVF G Sbjct: 61 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAAGAKFVQVSTDYVFSGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + ++RTAW+Y G NF+ +M+RL Sbjct: 121 DPAPRVESDPTGPVSAYGRTKLAGEERSLEACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFA+ Sbjct: 181 DRDEVTVVDDQLGNPTSANDLAHEILEIAA-------TENYGVYHCTNE-GTCSWADFAQ 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + E G V R +++Y P A RPAYS L L +T ++ W+E + Sbjct: 233 AVM----EGAGLDCTVARCTSEEYAAMNPASAKRPAYSSLRNKHLEDTVGDKMRPWREAL 288 Query: 284 RNIL 287 L Sbjct: 289 SAYL 292 >gi|325970226|ref|YP_004246417.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] gi|324025464|gb|ADY12223.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] Length = 299 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 152/302 (50%), Gaps = 24/302 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 M L+ G +GQ+ L + + I+ V ++D+ +FF Sbjct: 1 MTILITGAHGQLGNELQKILEEATSERGKLPLFYERSRIVAVDVDELDITSSDAVDAFFS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P++ N AA T VD E + A+ +NA G +A A + G ++ISTDYVFDGL Sbjct: 61 VHKPNLAFNCAAMTNVDGCEGNEDAAYLVNAVGPKNLALACERHGARLMHISTDYVFDGL 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E T P YG+SKLAGE+ V + N I RTAW+Y G+NF+ ++LRLA+ Sbjct: 121 GTRPYVETDETAPNTAYGRSKLAGEQFVLASCRNSCICRTAWLYGYIGNNFVKTLLRLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PTSA + +A L + + GIFH T +G VSW FA+ Sbjct: 181 EKGSLTVVDDQVGNPTSA-------VDLAWQLALLAASQETGIFHCTCNGEAVSWNAFAK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E+ G +V T Q+P A RPAYS L+ L T + WKE + + L Sbjct: 234 RIM----EKAGLAVEVKACTTAQFPRPAKRPAYSALENRHLRKTIGDSMRDWKEALDSFL 289 Query: 288 VN 289 VN Sbjct: 290 VN 291 >gi|325970219|ref|YP_004246410.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] gi|324025457|gb|ADY12216.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] Length = 299 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 109/302 (36%), Positives = 151/302 (50%), Gaps = 24/302 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 M L+ G GQ+ L + + V I+ V ++D+ SFF Sbjct: 1 MTILITGAKGQLGNELCRILGEGVSERGELPLFYERSRIVAVDVDELDITTSDAVDSFFA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+++ N AA T VD E + A+ +NA G +A A + G ++ISTDYVFDGL Sbjct: 61 LHKPNLVFNCAAMTNVDGCEGNEDAAYLVNAVGPKNLAVACERHGARLMHISTDYVFDGL 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E P YG+SKLAGE V + N I RTAW+Y G+NF+ ++LRLA+ Sbjct: 121 GTRPYVETDEPAPNTAYGRSKLAGERFVLASCRNSCICRTAWLYGYIGNNFVKTLLRLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PTSA + +A L + + GIFH T +G VSW FA+ Sbjct: 181 EKGSLTVVDDQVGNPTSA-------VDLAWQLALLAASQETGIFHCTCNGEAVSWNAFAK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E+ G +V T Q+P A RPAYS L+ L T + WKE + + L Sbjct: 234 RIM----EKAGLAVEVKACTTAQFPRPAKRPAYSALENRHLRETIGDSMRDWKEALDSFL 289 Query: 288 VN 289 VN Sbjct: 290 VN 291 >gi|167755067|ref|ZP_02427194.1| hypothetical protein CLORAM_00571 [Clostridium ramosum DSM 1402] gi|167705117|gb|EDS19696.1| hypothetical protein CLORAM_00571 [Clostridium ramosum DSM 1402] Length = 280 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 157/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C +++E + V ++D+ A S + + +I+ AA Sbjct: 1 MKLLVTGVKGQLGHDIVNECNNRNIEAVGVDVEEMDITDAGKVAEVIKSGNYNAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E+ +N +G IA + IP +Y STDYVFDG T E+ + Sbjct: 61 WTAVDKAEDEVELCTKVNVDGTRNIANICKELDIPMMYFSTDYVFDGQGETEWKEYDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + ++ I+R AWV+ I G+NF+ +MLRL KER + VV DQ Sbjct: 121 PLNVYGQTKYEGELIVETLPKHF-IVRIAWVFGINGNNFIKTMLRLGKERGAVCVVDDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T GI+H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGIYHATNE-GLCSWYEFACEIF----KQAGM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + + L R+ TW++ + L I Sbjct: 228 SVEVTPVDSNAFPAKAKRPNNSRMSKAMLDKNGFGRLPTWQDALSRYLKEI 278 >gi|320162333|ref|YP_004175558.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] gi|319996187|dbj|BAJ64958.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] Length = 297 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 148/288 (51%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G+ GQ+ E++ P++D +P+ + P VI+N AAY Sbjct: 1 MRILLLGHGGQVGWECRRTLAPLGEVVTADYPEVDFAQPEGLPALMERVRPQVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE A +NA G +A++A + ++ISTDYVFDG P E NP Sbjct: 61 TAVDRAESEPETARRVNALAPGVLAQSARRLRAALVHISTDYVFDGRKGAPYTEEDIPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG++K GE+ V Y+ILRT+WVYS+ +F+ +L ++++ + VV DQ Sbjct: 121 LSVYGQTKWEGEQAVQEAGGAYLILRTSWVYSLRRESFVSKVLEWSRQKDVLRVVDDQVA 180 Query: 181 TPTSALQIARAIIQIAHNLIENSD-----TSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 PT A +A+AI + + + D RG++H+ G + E + + Sbjct: 181 GPTWARMLAQAISAVLAQSLASGDIFDWLEERRGVYHLAGKGWCSRYQWACEILRLDPHR 240 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++ T ++PT A RP +S L+ SK T + + W + + Sbjct: 241 EQQRAREILPARTAEFPTPAVRPLFSALEMSKFERTFGLTLPLWSQAL 288 >gi|239503783|ref|ZP_04663093.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose [Acinetobacter baumannii AB900] Length = 301 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 110/302 (36%), Positives = 157/302 (51%), Gaps = 14/302 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-DIDLLKPKDFASF------FLSFSPDV 53 MK L++G NGQ+ L E+I + R +D L D A+F P++ Sbjct: 1 MKILLLGKNGQVGWELQRALQPLGEVIALDRSTSLDGLSG-DLANFDQIKQTIEKVQPNI 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+N AAYTAVDKAE + E A IN +A+ + I I+ STDYVF+G Sbjct: 60 IVNAAAYTAVDKAESDQENADLINHLAVKNLAELCQTHHILLIHYSTDYVFNGEGTKAWS 119 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E TNP+N+YG +K GE + ++ RT WVY G+NF+ +ML+LA R E+S Sbjct: 120 ESDLTNPINLYGNTKRLGEIALEQSGCAFINFRTCWVYGSHGNNFIKTMLKLASNREELS 179 Query: 174 VVCDQFGTPTSALQIARAIIQIA--HNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ DQ G PT A IA Q ++L++ L G +H+ A G SW D+A+++F Sbjct: 180 IIHDQIGAPTGAALIADVTAQALKYYSLMDAQQQKDLLGHYHLAA-AGECSWFDYAQFVF 238 Query: 231 WESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + ++G + KV I T YPT A RP S L+ +KL I + WK GV +L Sbjct: 239 ELAKQKGQSLAIQKVNAIETTAYPTPAKRPLNSRLNTNKLQANFKIHLPNWKLGVAQVLE 298 Query: 289 NI 290 I Sbjct: 299 EI 300 >gi|257456602|ref|ZP_05621797.1| dTDP-4-dehydrorhamnose reductase [Treponema vincentii ATCC 35580] gi|257446022|gb|EEV21070.1| dTDP-4-dehydrorhamnose reductase [Treponema vincentii ATCC 35580] Length = 290 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 5 VIGNNG----QIAQSLSSMCVQ----DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 +IG+ G +IA L + +Q D E+ R I+ ++F L + IIN Sbjct: 4 LIGSKGMLASEIAAQLDTHAIQWIGSDKEVDITDRISIEAFAQRNFTVGPLQW----IIN 59 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAED+P A +NA+ I + A G I+ STDYVFDG S P E Sbjct: 60 CAAYTAVDKAEDDPVTAQKLNADALINICEVAKQYGSQLIHFSTDYVFDGTSAVPYTEAD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P ++YG +KL GE + + I+RTAW+Y G+NF+ +MLRL E+ + VV Sbjct: 120 HTQPQSVYGVTKLQGERNIVERLPEHYIIRTAWLYGKNGNNFVSTMLRLMNEKDSLKVVN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT A+ +A+A+++I D GI+H + +G ++W DFA I+ + E Sbjct: 180 DQRGSPTYAVDLAKAVLRIMQ-----LDNHRYGIYHYSNEGN-ITWYDFACEIYKQGKES 233 Query: 237 GGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G S V + ++P KAHRP++S L+ K+ ++ I W E + Sbjct: 234 GLIKSDCAVASCSSNEFPQKAHRPSFSLLNKEKIKAAFSLSIPQWNESL 282 >gi|332142155|ref|YP_004427893.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552177|gb|AEA98895.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii str. 'Deep ecotype'] Length = 288 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/267 (40%), Positives = 146/267 (54%), Gaps = 13/267 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +VIGN GQ++ L + +D I +G D D+ K + +PDVIIN AAY Sbjct: 1 MKIVVIGNAGQLSYELVRILGEDT--ICLGPEDTDITKFDVLSETLSQLAPDVIINAAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E E+ +INA +AK G +++STDYVF+G +P P P Sbjct: 59 TAVDKAEEEQELCHAINATAVENLAKYCKKAGAFVVHVSTDYVFNGHKGSPYLPSDPIEP 118 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 YGK+K GE+ + ++RTAWVYS G+NF+ +ML+L ++ +++V+ DQ Sbjct: 119 QGAYGKTKADGEKALLDILPEASCLIRTAWVYSAHGNNFVKTMLKLMADKPQLTVIDDQI 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A A + A N G++H T D G SW DFA I E+G Sbjct: 179 GTPTWAKGLADACVSAAKN-------KTVGVYHWT-DEGVASWYDFALAIQELGLEKGLL 230 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLD 264 S V I + QYPT A RP YS LD Sbjct: 231 ESAIPVLPIPSSQYPTPAKRPHYSVLD 257 >gi|150004941|ref|YP_001299685.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|149933365|gb|ABR40063.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] Length = 286 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVRNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I +N+IE + +G++H + + G SW DFA+ E E G Sbjct: 181 GTPTYAGDLAALI----YNIIEENLLDRQGVYHFSNE-GVCSWYDFAK----EICELSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVGRPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|332686305|ref|YP_004456079.1| dTDP-4-dehydrorhamnose reductase [Melissococcus plutonius ATCC 35311] gi|332370314|dbj|BAK21270.1| dTDP-4-dehydrorhamnose reductase [Melissococcus plutonius ATCC 35311] Length = 280 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ I ++D+ + SF P +I + AAYT+ Sbjct: 3 LITGGNGQLGTELRYLLDELAIDYISTDSKELDITNKEQTYSFVQKIKPTIIFHCAAYTS 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E E+ IN G + +AA S+ +YISTDYVFDG + + + TNP Sbjct: 63 VDKAEEEGKELDEDINVNGTVNVVEAAKSVDATLVYISTDYVFDGTKKEDFYKTTDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KL GE+ V + Y I+RT+WV+ +G NF+ +M +LA+ ++++VV DQFG Sbjct: 123 QNEYGRTKLLGEQAVQKDLSRYYIIRTSWVFGQYGHNFVFTMQKLAETHQQLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I+ I GI+H++ + SW +FA+ I + Sbjct: 183 RPTWTRTLAEFIVFIIKK------QEPYGIYHLSNENS-CSWYEFAQEILKNNE------ 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + Q+P KA RP YS +D SK N I TW+E + +L Sbjct: 230 VKVLPIDSTQFPQKAKRPQYSVMDLSKAENL-GFNIPTWQEALEKML 275 >gi|32451220|emb|CAD55726.1| putative dTDP-dehydrorhamnose reductase [Bacteroides coprosuis] Length = 287 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + G +++ + + + + + D IIN A Sbjct: 1 MNILITGANGQLGSEFRELSPLYSSYNFFFAGCDSLNICEVEAVREYISAHNIDFIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE+ P +N +AK AD I+ STDYVFDG TP E PT Sbjct: 61 AYTAVDAAEENPVDCDKVNHTAVSNLAKVADEYDAGLIHFSTDYVFDGSKNTPYTEEDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + IYG +KLA E + N +++RT+WVYS +G NF+ ++L+ + R + VV DQ Sbjct: 121 SARAIYGITKLASERVALAKCNKAMVIRTSWVYSFYGHNFVKTVLKQLQLRGSMGVVYDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ ++ + S + G++H + + G SW DFA+ + + +G Sbjct: 181 IGTPTYAKDLAKFVLNVL------STDFIPGLYHYSNE-GVCSWFDFAKMVQRFAGLKG- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++Y I + QYP KA RPAYS LD +K+ +T+NI+I W + + + I Sbjct: 233 ---EIYPIHSDQYPAKAPRPAYSVLDKTKVKDTYNIKIPYWVDSLEECIQRI 281 >gi|72383077|ref|YP_292432.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL2A] gi|72002927|gb|AAZ58729.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL2A] Length = 298 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 109/304 (35%), Positives = 156/304 (51%), Gaps = 28/304 (9%) Query: 1 MKCLVIGNNGQIAQ-----SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G NGQ+ Q SLS +EII+ R ++DL+ S PD +I Sbjct: 1 MKILLTGANGQLGQQIVSESLSFSTQMSLEIIQCTREELDLVDYDACKSIVEYHKPDWVI 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AYT V+KAE EP IA+ +NA+ A +A G I IS+DYVF+G +P Sbjct: 61 NAGAYTNVEKAETEPNIAYQVNAQAPAAFVEALTKYGGQIIQISSDYVFNGDQSSPYKTS 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER----RE 171 PL +YGKSK GEE V +Y +++R+ WVY G+NFLL M+ L E R Sbjct: 121 DLIQPLCVYGKSKARGEEFVLAYDKG-IVIRSGWVYGPVGNNFLLKMIHLHSEESDKPRT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA----- 226 + VV DQ G+PTS +A A+++ +++ +S I H + D G SW DFA Sbjct: 180 LKVVSDQIGSPTSTKNLAIAVLR---SIMVSSKIYTPKILHFS-DAGVASWYDFAIAISE 235 Query: 227 ---EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 E +++ R P I +K Y T A RP YS LDC N ++ W++ + Sbjct: 236 IAIELDLFQNPLRIEP------IQSKNYKTLAKRPNYSVLDCFATMNALKMKPLHWRDSL 289 Query: 284 RNIL 287 +++ Sbjct: 290 SHVM 293 >gi|317052619|ref|YP_004113735.1| dTDP-4-dehydrorhamnose reductase [Desulfurispirillum indicum S5] gi|316947703|gb|ADU67179.1| dTDP-4-dehydrorhamnose reductase [Desulfurispirillum indicum S5] Length = 285 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 149/286 (52%), Gaps = 11/286 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ LS I GR +D+ D F ++ I+N AAYT Sbjct: 3 KILVTGGHGQLGGELSER--LGPACISAGREVLDVTAYGDVERFCRTYPIAGIVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE E E AF IN +GA +A+ + +GIP I+ISTD+VFDG P E NPL Sbjct: 61 AVDAAESECENAFRINEKGAAHLARISGDLGIPFIHISTDFVFDGTKTVPYVEGDVPNPL 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGEE V S + I+RT+W+YS G NF+ ++L+ A ++ VV DQ G+ Sbjct: 121 GVYGASKLAGEEAVMSANDRSTIVRTSWLYSSRGKNFVKTILQHASRSGQLRVVDDQVGS 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A +++ ++ S +FH A+ G SW DFA I G Sbjct: 181 PTYAGDLADMLVR----MLSCSSVGGGRVFHF-ANEGVCSWYDFACAI----TAMAGIKC 231 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T +YP A RP YS L+ K+ + I W+ + + Sbjct: 232 DIEPIETSEYPLPAKRPHYSVLNKRKIKTEFGVTIPYWRNSLERCI 277 >gi|117927625|ref|YP_872176.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus 11B] gi|117648088|gb|ABK52190.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus 11B] Length = 293 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 103/284 (36%), Positives = 156/284 (54%), Gaps = 11/284 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ L + + E++ + R ++D+ + F PDV+IN AAY Sbjct: 3 RWLVTGAGGQLGSDLVDLLQRSGAEVVGLARAELDITDADAVLAACERFHPDVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE +P AF++NAEGAG +A A +G +++STDYVF G + +P DE +P P Sbjct: 63 TAVDAAESDPATAFAVNAEGAGHVAAATAKLGARLVHVSTDYVFAGDATSPYDEEAPVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SK AGE V ++RTAWVY G NF+ +M RL +E+ ++VV DQ G Sbjct: 123 RSVYGRSKAAGERAVLEAHPGAYVVRTAWVYGAVGQNFVKTMARLEREKETVTVVDDQRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A A+I +A + + G++H T + G +W FA IF E G Sbjct: 183 SPTWSRDLADALITLARS------DAPPGVYHCT-NAGETTWFGFARAIF---EELGADP 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++V T +P A RPAYS L + + W++ +R Sbjct: 233 TRVRPTTTAAFPRPAPRPAYSVLGHRRWQQAGLPAMRPWRDALR 276 >gi|330994212|ref|ZP_08318140.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] gi|329758679|gb|EGG75195.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] Length = 294 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 107/288 (37%), Positives = 155/288 (53%), Gaps = 12/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G +GQ+A +L++ ++IRVGRPD+D +P + + P +++N AA+TAV Sbjct: 6 LVTGGSGQLACALAAH----ADVIRVGRPDLDFDRPDTIDTVLRAHRPAIVVNAAAWTAV 61 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE E A N G +A +G I+ISTDYVF G +P E P +P ++ Sbjct: 62 DAAESHMEEADRANHTGPARMAARCREMGSRFIHISTDYVFSGDKGSPYVESDPVDPRSV 121 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K AGE+ V + + +ILRTAWVYS + NF+ +M+ A R E+ VV DQ G PT Sbjct: 122 YGSTKAAGEQAVLAACPDSIILRTAWVYSPYNRNFVRTMIEAAARRPELRVVGDQIGNPT 181 Query: 184 SALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 SA +A I+ I + DT R GI+H +G SW + A +A G P Sbjct: 182 SADALADVIMHIIARI---RDTGWRPEYAGIYHAAGEGS-ASWYELACAAIKAAARHGNP 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S + I T +PT AHRP + LDC++L + W+ V ++ Sbjct: 238 ESVIEPITTADWPTPAHRPHDARLDCTRLKQVFDCAPGPWRPEVERVV 285 >gi|228912336|ref|ZP_04076031.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|228847319|gb|EEM92278.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] Length = 282 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ +S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLIQVLSRTHHELYGVNRTTLDITNKIRVSSYLDRLKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE +A+ +N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKNKGLAYEVNVLGTKYIAQAAGRIKCKFVYISTDYVFDGEKHTPYNLVDHPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT + I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEYFVKKYTKKHFIIRTSWIFGKGDGHFIAKIAKIASLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A+ +A I ++ +T G++H T + G SW +FA F++ R Sbjct: 181 GSPTYAIDLANFIEELV-------ETDQFGLYHATNE-GVCSWYEFA-VEFFKDFNRD-- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL--DCSKLANTHNIRISTWKEGVR 284 + + T+++P A+RP YS L DC L +R WKE ++ Sbjct: 230 -INIIPLTTEEFPQTANRPKYSVLSKDCIMLNGLKPLR--HWKEALK 273 >gi|221213793|ref|ZP_03586767.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221166582|gb|EED99054.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 305 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 107/286 (37%), Positives = 145/286 (50%), Gaps = 9/286 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +V+G GQ+ L I+ R +DL S+ L +P V++N AAYTAV Sbjct: 10 IVLGGTGQVGFELVRAVQGIGPIVAPARQVLDLSDLCAVESWILRQNPLVVLNAAAYTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE + + A INA +A+ IG I+ STDYVFDG E PLN+ Sbjct: 70 DRAESDRDAAMRINAALPDTLARTCARIGALLIHYSTDYVFDGSKPDLYTESDDPAPLNV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE +A + I RT+WVY GSNF+ +MLRLA ER +V DQ G PT Sbjct: 130 YGESKLAGERAIAEAAAPHAIFRTSWVYGNRGSNFMNTMLRLANERDRFRIVGDQIGAPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSLR------GIFHMTADGGPVSWADFAEYIFWESAERG 237 + IA + + + N G+FHM A+ G VSWA FA IF + Sbjct: 190 WSRTIAELTVHLLSRTVSNGAIDQEFWNRNSGVFHMCAE-GEVSWAGFASAIFAHARPAS 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P V I + QYPT A RP S + +KL T ++ + W + + Sbjct: 249 QPVIDV--IGSAQYPTPAKRPLNSRMSTAKLCATFDLHVPNWSDAL 292 >gi|291486371|dbj|BAI87446.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus subtilis subsp. natto BEST195] Length = 283 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ +N GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+ A+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKFAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H+ ++ G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKLF--------SHPPGIYHV-SNSGICSWYEFAMAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYL 275 >gi|187920918|ref|YP_001889950.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187719356|gb|ACD20579.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 300 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 152/294 (51%), Gaps = 9/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G GQ+ L+ +++R R DL KP + PDV++N AAY Sbjct: 1 MRIAITGVQGQLGWELARSLAPLGDVVRWDREVADLSKPALLDGLMRFYRPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ A +N E +A+AA G ++ STDYVFDG S P E T P Sbjct: 61 TAVDKAEDDCVTARLVNTESVDVMARAAKRAGALFVHFSTDYVFDGKSPEPYSEDCETAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +K GE + + +++I RT+WVY+ G+NF+L+MLRLA ER + +V DQ G Sbjct: 121 LNVYGATKRDGELAIIASECDHLIFRTSWVYATRGANFMLTMLRLAGEREALKIVDDQLG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A +A I+ + E + + G+FH+T+ G SW +A I + A Sbjct: 181 APTPARMLANVTAHAISQAMRERREARFQSGLFHLTSR-GVTSWHGYASAII-DYARNLA 238 Query: 239 PYSKVY-----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +V + ++ +PT+A RP S L+ + + W + + L Sbjct: 239 PSGRVRVTHIEPVPSEAFPTRAARPRNSALNNDRFDERFGLVRPHWWDALAQTL 292 >gi|239628659|ref|ZP_04671690.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518805|gb|EEQ58671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 286 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ ++ + + +E V ++D+ + + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGHDVMNELASRGIEGFGVDVEEMDITSKEACENVITGAKPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NAEG IAK ++ I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNLELCRKVNAEGTRNIAKVCKALDIKMMYISTDYVFNGGGERPWEPDDHRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V + Y I+R AWV+ + G NF+ +MLRL KE+ +SVV DQ Sbjct: 121 PLNVYGLTKYEGEISVEQNVSRYFIVRIAWVFGVNGKNFIKTMLRLGKEKGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + + +P KA RP S + KL R+ +W++ + L Sbjct: 230 EVKVTPVDSSGFPAKAKRPQNSRMSKEKLTENGFERMPSWQDALGRYL 277 >gi|83814384|ref|YP_444734.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] gi|83755778|gb|ABC43891.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] Length = 302 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 143/276 (51%), Gaps = 4/276 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ +L + GR +DL + PD+++N AAYT V Sbjct: 9 LLLGATGQVGHALRRTLAPLGRVHTPGRAAVDLTDLTSVRAAVRELGPDLVVNAAAYTDV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE+EP A INAE +A+AA ++G ++ STDYVF G R P E +P+++ Sbjct: 69 DGAEEEPGRAARINAEAPRVLAEAARAVGAWLVHYSTDYVFGGTKRAPYTEADAPSPISV 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++K GE + + ++ILRT+WVYS SNF+ +ML LA E ++VV DQ G PT Sbjct: 129 YGRTKRDGEAAIQAVGGRHLILRTSWVYSRRRSNFVRTMLGLAAENDRLTVVDDQIGVPT 188 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A A A + L+ + G +H+ A G SW A +F A+ G Sbjct: 189 WAGWCAEATASVCERLLADDAAPEAGCYHL-AGTGQTSWYGLARAVF---AQFGRTDVAA 244 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + +Y T A RPAY+ LD S+ ++ +TW Sbjct: 245 QPVSSDEYETAAPRPAYTVLDSSRARAAFDLPATTW 280 >gi|323345519|ref|ZP_08085742.1| dTDP-4-dehydrorhamnose reductase [Prevotella oralis ATCC 33269] gi|323093633|gb|EFZ36211.1| dTDP-4-dehydrorhamnose reductase [Prevotella oralis ATCC 33269] Length = 284 Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 101/285 (35%), Positives = 155/285 (54%), Gaps = 12/285 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + +++ ++D+ +D + + I+N A Sbjct: 1 MNILITGCNGQLGNEIQLLEKGNIQCQWFNTDVSELDITNAEDIEHYIQQHRINGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE ++ ++NAE +A A + G I ISTDYVFDG TP E Sbjct: 61 AYTAVDRAESNYQLCRALNAEAPAYLAAAIEKRGGWLIQISTDYVFDGTQHTPYVETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YGK+KL GE + +I+RTAW+YS FG+NF+ +M++L KE+ E+ V+ DQ Sbjct: 121 CPNSVYGKTKLVGETAIRKICKKTMIIRTAWLYSTFGNNFVKTMIKLGKEKTEMGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ I+ + I + G +H + +G +SW DFA+ + +G Sbjct: 181 IGTPTYAADLAKVIMTAINQGI------VPGTYHFSNEGA-ISWYDFAKAV---HRIKGI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V + T +YPT A RP YS LD +KL T+ I I W+E + Sbjct: 231 TTCHVKPLHTAEYPTPAKRPHYSVLDKTKLKQTYGIEIPYWEESL 275 >gi|238916052|ref|YP_002929569.1| dTDP-4-dehydrorhamnose reductase [Eubacterium eligens ATCC 27750] gi|238871412|gb|ACR71122.1| dTDP-4-dehydrorhamnose reductase [Eubacterium eligens ATCC 27750] Length = 305 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 160/313 (51%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--------QDVEIIRVGRPD-----------IDLLKPKD 41 MK LV G GQ+ + + + D+ G D +D+ Sbjct: 1 MKILVTGVGGQLGHDVMNELIGRGHTGVGSDIAPEYSGVADGSAVTTAEYVPMDITDAAQ 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 + SPDV+I+ AA+TAVD AED+ + A +INA+G IA + +YIS Sbjct: 61 VSEVITKVSPDVVIHCAAWTAVDAAEDDDKKAKVKAINADGTQNIANVCKQLDCKMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + + PLN+YG++KLAGE V++ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGETPWEPDCKDYKPLNVYGETKLAGELAVSNTLDKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHDEVRVVNDQIGTPTYTLDLARLLVDMV-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ + G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 YISWYDFTKEIY----AQAGLSTKVTPVTTAEYGISKAARPFNSRLDKSKLTANGFTPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALHRFLKEI 302 >gi|160425319|gb|ABX39511.1| RmlD [Aeromonas hydrophila] Length = 300 Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 155/298 (52%), Gaps = 14/298 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-----IIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M+ L++G GQ+ ++L C VE +I +GR + D+ + PDVII Sbjct: 1 MRILLLGARGQLGRAL--FCALSVEFPHWQVIALGRKECDISDSDVLVDSMYAHHPDVII 58 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVD AE EPE+A +N + ++ + A+ +G ++ STDYVFDG P E Sbjct: 59 NCAAYTAVDAAETEPELADEVNHKALLSMDRGAEDLGALLVHFSTDYVFDGTGSQPWLET 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PLN+YG SK AGE + +++I+RT W+Y G +F ++L A + + VV Sbjct: 119 DQPSPLNVYGASKYAGELAIQRLCPDHLIIRTGWLYGGEGKHFARTILARASQGLPLGVV 178 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT +ARA + ++ + S G++H+T G SW FA + A Sbjct: 179 ADQWGAPTQVDWLARASVLALSQVVRSP--SKVGLYHLTCR-GETSWHGFASALV-NGAH 234 Query: 236 RGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R G K + I + ++P +A RP S LDCS + I + W E + N L + Sbjct: 235 RRGWLKKQVAIRCIGSGEWPQQACRPLNSRLDCSLFSRVFGIDLPLWHEQMANWLTKL 292 >gi|160940129|ref|ZP_02087474.1| hypothetical protein CLOBOL_05018 [Clostridium bolteae ATCC BAA-613] gi|158436709|gb|EDP14476.1| hypothetical protein CLOBOL_05018 [Clostridium bolteae ATCC BAA-613] Length = 286 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 148/288 (51%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + ++ +E V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGHDVMDELALRGIEGFGVDVEEMDITDRTACETVISQEKPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INAEG IA+ ++ I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNLELCRKINAEGTRNIARVCKAMDIKMMYISTDYVFNGGGERPWEPDDHRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V Y I+R AWV+ + G NF+ +MLRL KE+ +SVV DQ Sbjct: 121 PLNVYGLTKYEGEIAVEQNVQKYFIVRIAWVFGVNGKNFIKTMLRLGKEKGAVSVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + + +P KA RP+ S + KL R+ +W+ + L Sbjct: 230 EVKVTPVDSDGFPAKAKRPSNSRMSKEKLTENGFERLPSWQNALERYL 277 >gi|171463074|ref|YP_001797187.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192612|gb|ACB43573.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 317 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 110/300 (36%), Positives = 158/300 (52%), Gaps = 24/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-----DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G +GQ+ ++ S++ Q + +I +GR + DL K D + + P++II Sbjct: 1 MNVLVFGKDGQLGKAFSALIGQSSISANTQITYLGRAECDLSKEADVFAALKAAKPNLII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVDKAE E ++AF++NA+ +A+ A ++ STDYVFDG E Sbjct: 61 NASAYTAVDKAETEVDLAFAVNAKAPEIMARYAAENDATLLHYSTDYVFDGSKDGLYMED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVA-----SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P NPL +YGKSK AGEE + S + I RT+WVY G NF+ +MLRLAK+R Sbjct: 121 DPRNPLGVYGKSKAAGEEAIEKVFANSSKGQFAIFRTSWVYGD-GGNFIRTMLRLAKDRE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFA 226 E+ V+ DQ G PTSA +A QI+ +L+ + L+ GI+H G +W A Sbjct: 180 ELKVIHDQHGVPTSAEWLA----QISLDLVLDQQGGLKVFPSGIYHAIP-AGETTWHGLA 234 Query: 227 EYIFWESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + + G + + I +YP A RP S +D SKL T + S K G Sbjct: 235 SFAVQVALNAGIELKAKPAAIKPILAVKYPLPAPRPMNSRMDRSKLRKTLENQGSMAKLG 294 >gi|188583450|ref|YP_001926895.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] gi|179346948|gb|ACB82360.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] Length = 296 Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 152/290 (52%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L + E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQAFPWP--EGVRVHAPDRQSLDITDEAAVAAALEARAYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S +VI+RTAWV S NF+ +MLRLA ER +++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSANPRHVIVRTAWVVSPHRGNFVKTMLRLANEREQLTVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A A+ IA + + + + G H DG +W DFA I SA RG Sbjct: 179 QHGCPTSAADLAGALAAIALRMAGD-ERAPTGTVHCVNDGA-TTWCDFARAIVAGSARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I T YPT A RPA S L L N + + W+ + +IL Sbjct: 237 GRSVPVEGIPTAAYPTPARRPANSRLSTQSLTNAYGLAPRGWEAALDDIL 286 >gi|10803349|emb|CAC13137.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter xylinus] Length = 295 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 150/284 (52%), Gaps = 6/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G +GQ+A +L+ ++RVGRPD D +P +P+ ++N AA+TAV Sbjct: 8 LVTGGHGQLATALAGH----EGVMRVGRPDFDFDRPGTIDQIMAENTPEFVVNAAAWTAV 63 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE + E A N G +A A + GIP I+ISTDYVF G +P E P +P ++ Sbjct: 64 DAAETDAEGAARANHAGPARLAAACRARGIPLIHISTDYVFSGDKGSPYMETDPVDPRSV 123 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K AGE+ V + + +ILRTAWVYS + NF+ +M+ A R + VV DQ G PT Sbjct: 124 YGSTKAAGEQAVLAAQPDSIILRTAWVYSPYNRNFVRTMVEAAARRPTLRVVSDQIGNPT 183 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 SA +A+ I+ I + E GI+H G SW D A +A G P Sbjct: 184 SADALAQTIMHIIRQIRETGWKADYAGIYHAAGQGA-TSWYDLACAAVAAAARHGNPQPV 242 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T +PT A RPA + LDC++L T W+ V + Sbjct: 243 MEPITTADWPTPARRPADARLDCTRLQETFGHAPGPWQPEVERV 286 >gi|333030052|ref|ZP_08458113.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] gi|332740649|gb|EGJ71131.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] Length = 287 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + G +++ + + + + + D IIN A Sbjct: 1 MNILITGANGQLGSEFRELSPLYSSYNFFFAGCDSLNICEVEAVREYISAHNIDFIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAV+ AE+ P +N +AK AD I+ STDYVFDG TP E PT Sbjct: 61 AYTAVNAAEENPVDCDKVNHTAVSNLAKVADEYDAGLIHFSTDYVFDGSKNTPYTEEDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + IYG +KLA E + N +++RT+WVYS +G NF+ ++L+ + R + VV DQ Sbjct: 121 SARAIYGITKLASERVTLAKCNKAMVIRTSWVYSFYGHNFVKTVLKQLQLRGSMGVVYDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ ++ + S + G++H + + G SW DFA+ + + +G Sbjct: 181 IGTPTYAKDLAKFVLNVL------STDFIPGLYHYSNE-GVCSWFDFAKMVQRFAGLKG- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++Y I + QYP KA RPAYS LD +K+ +T+NI+I W + + + I Sbjct: 233 ---EIYPIHSDQYPAKAPRPAYSVLDKTKVKDTYNIKIPYWVDSLEECIQRI 281 >gi|199599664|ref|ZP_03213039.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus HN001] gi|258508991|ref|YP_003171742.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] gi|199589439|gb|EDY97570.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus HN001] gi|257148918|emb|CAR87891.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] gi|259650284|dbj|BAI42446.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] Length = 280 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + PDV+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGITYRATDAKDLDITDEAAVNQYFADYQPDVVYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + + +N +G +AKAA + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKALNQLVNVDGTRNLAKAAAKVDATLVYISTDYVFDGDSKEIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDQHLD------YGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S + +YP KA RP +S LD SK T I TW++ +++ L Sbjct: 234 PVS------SAEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKDFL 275 >gi|77920187|ref|YP_358002.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380] gi|77546270|gb|ABA89832.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380] Length = 314 Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 152/298 (51%), Gaps = 13/298 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + ++G G +A+ + + +I+ + P DL +F PDVIIN AAYT Sbjct: 7 RVAIVGARGMLARMVLRSAPSEWDIVALSHPQFDLTDRASARMGLSAFQPDVIINCAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE +AFS+NA G G +A+ A + ++ S+DYVF G P E +P Sbjct: 67 DVDGAESNEALAFSVNAVGPGNLAQVAKELNATLVHFSSDYVFGGDKTAPYRETDCPDPR 126 Query: 122 NIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYGKSKL GE+ + S + I+RT+W+Y G NF+ SM+RLA++R E+ +V DQFG Sbjct: 127 SIYGKSKLQGEQLIQDSGLERFFIVRTSWLYGPGGKNFVESMIRLAQQREELRIVADQFG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS-------LRGIFHMTADGGPVSWADFAEYIFWES 233 +PT + +A + + E +DT L GI+H A+ G SW FAE I Sbjct: 187 SPTYTADLTQAALNLLAE--ETTDTRKKRTPDPLYGIYHY-ANEGQCSWHRFAEEIVSLL 243 Query: 234 AERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + I T YP A RP+YS L +K T + W++ + + N Sbjct: 244 KTNGETIKAKLILPIPTTAYPLPAPRPSYSVLSKAKYRKTTGAIVPNWRQALARYMAN 301 >gi|325958675|ref|YP_004290141.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. AL-21] gi|325330107|gb|ADZ09169.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. AL-21] Length = 280 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 153/287 (53%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK ++IG+ G + L ++ E++ +D+ +PDV+I+ AA Sbjct: 1 MKVMIIGSEGMLGHDLVAVLSPLHEVVTTTIDTLDITDIDKTIKTVKKNNPDVLIHAAAI 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +E P++A+ +NA G +A A +G +YISTDYVFDG + TP +E+ T P Sbjct: 61 TDVDGSESNPDLAYKVNAIGTRNVAVACKEVGASMVYISTDYVFDGTNTTPYNEYDQTKP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGK+K GE V + + I+RTAW+Y G NF+ +ML LAK ++ISVV DQ G Sbjct: 121 LGVYGKTKHTGETYVRDTLSKFYIVRTAWLYGYHGPNFVTTMLNLAKNTKDISVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A AI I + S GI+H T + SW DFA IF ++ G Sbjct: 181 SPTYTVDLANAISTII-------NRSSYGIYHFT-NTDHCSWFDFATEIF----KQAGVE 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + T+++P A RP YS L+ I +KE +++ + Sbjct: 229 VNLKPVTTEEFPRPAPRPKYSVLNHYSWKMEGYPPIRNYKEALKDYM 275 >gi|302337209|ref|YP_003802415.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] gi|301634394|gb|ADK79821.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] Length = 292 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/286 (37%), Positives = 158/286 (55%), Gaps = 10/286 (3%) Query: 5 VIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 VIGN G + + LS + + I R ++D+L P I+N +AYTAV Sbjct: 4 VIGNKGMLGRELSDHLSEAGLSFIGTDR-EVDILSSAALEERAAEIHPAWIVNCSAYTAV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAE+E E A S+N +G IAK A S +P I+ISTDYVFDG S TP+ E +P P Sbjct: 63 DKAEEEEEAARSLNRDGVAHIAKLAISRKVPLIHISTDYVFDGSSNTPLHEDAPCAPQTA 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG++KLAGE+++ + N+ I+RTAW+Y +G NF+ +ML L R+EI+VV DQ G+PT Sbjct: 123 YGRTKLAGEQELRTIWPNHFIIRTAWLYGRYGKNFVDTMLSLMNSRKEITVVNDQTGSPT 182 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 + I+ I D + G +H++ +G +W FA I+ ER S Sbjct: 183 WTRVLTGLILTII-----KQDKACYGTYHLSGEGS-CTWYQFAREIYRMGRERTLVSSDC 236 Query: 243 -VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V ++Q+PT A RPAYS L K+ + + W++ + + L Sbjct: 237 AVTPCSSEQFPTAAKRPAYSLLSKEKIMHAFAYQPPQWQDSLASYL 282 >gi|254558142|ref|YP_003065667.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] gi|254265685|emb|CAX17026.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] Length = 296 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 152/290 (52%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L ++ D +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQALSWPDG--VRVHAPDRQSLDITDEGAGAAALDARAYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A GIP +++STDYVF+G +P Sbjct: 59 AAYTAVDKAESEVAAAWRLNALAPAILATETKRRGIPLVHVSTDYVFEGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRL+ ER +++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSANPRHAIVRTAWVVSPHRGNFVKTMLRLSGEREKLTVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A A + + D + G H DG +W DFA I SA+RG Sbjct: 179 QHGCPTSAADLA-AALATIALRLAGDDAAPTGTVHCVNDGA-TTWCDFARAIVAGSAKRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I T YPT A RPA S L L++ + I W+ + +IL Sbjct: 237 GRSVPVEGIPTAAYPTPARRPANSRLSTQSLSDAYGIAPRPWEAALDDIL 286 >gi|298353047|gb|ADI77025.1| RmlD [Escherichia coli] Length = 299 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 152/296 (51%), Gaps = 15/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + ++ + V D D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDK P + + K +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKLSQNPNLHNYSMRPALNQLQKRPMKVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQENCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAI---IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 DQFG PT A +A I++A N E + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPE-----VAGLYHLVAS-GTTTWHDYAALVFEEA 234 Query: 234 AERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + K+ I T YPT A RP S L+ K + + W+ GV+ +L Sbjct: 235 RKAGIPLALNKLNAISTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRML 290 >gi|218290278|ref|ZP_03494424.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] gi|218239633|gb|EED06825.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + L + DVE+I R ++D+ + + PDV+I+ AA Sbjct: 1 MKILVTGAGGQLGRELVRYPKLADVEMIGCTRAEMDVTHLEAVREKLRAVRPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE P A+ +NA G +A AA+ +G Y+STDYVFDG + P E+ TN Sbjct: 61 YTKVDLAESCPADAYRVNALGTRNVAVAAEEVGAKVCYVSTDYVFDGQADRPYGEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK AGE V + + I+RT+WV+ +G NF+ ++L A+ + VV DQ Sbjct: 121 PLSVYGKSKRAGEILVQGLCSRWFIVRTSWVFGKYGPNFVKTILTKARAGEPLRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR +I + T GI+H T + G SW +FA I E+A Sbjct: 181 GSPTYTKDLARFLIDLVR-------TEAYGIYHAT-NQGQCSWYEFACAILEEAAVT--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +P A RP +S L + L + W++ ++ L + Sbjct: 230 -TAIEPCTTDAFPRPAPRPKFSVLGQTMLLAEGFTPLRPWRDALQEFLREL 279 >gi|187476638|ref|YP_784661.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N] gi|115421224|emb|CAJ47729.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N] Length = 291 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 103/301 (34%), Positives = 161/301 (53%), Gaps = 24/301 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 MK L++G +GQ+ ++L E++ +GR +DL + +PDVI+ Sbjct: 1 MKILLLGKDGQVGRTLCRALAPLGELLALGRRPQPQGHVDLSDLASLSRLVREVNPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+TAVD+AE EP++AF INAE +A+A ++ S++YV+DG E Sbjct: 61 NAAAFTAVDQAEREPDLAFRINAEAPEILARAMRERQGWLVHYSSEYVYDGSGSEFRTED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 SPT PLN+YG SK AG+E + ++++LRT+WVY G F ++LRLA + +V Sbjct: 121 SPTAPLNVYGLSKRAGDEAICRSGAHHLLLRTSWVYGSRGEGFPQTVLRLAAASGTLRMV 180 Query: 176 CDQFGTPTSALQIAR----AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 DQ G PT A +A A+ Q ++ G++H+ A G VS AD+A ++ Sbjct: 181 DDQVGAPTGADLLADVSALALWQACRR------PAVSGLYHVAA-AGAVSRADYARHVLN 233 Query: 232 ES--AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ A P + V YPT A RP S LDC++L +R+ W++G+ L + Sbjct: 234 QARLACATAPIASV------DYPTPAQRPLNSRLDCTRLQRVFGLRLPDWRDGLDRALAS 287 Query: 290 I 290 + Sbjct: 288 M 288 >gi|300173012|ref|YP_003772178.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc gasicomitatum LMG 18811] gi|299887391|emb|CBL91359.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc gasicomitatum LMG 18811] Length = 279 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 153/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + +++ + +D+ + + F S PDVI++ AA Sbjct: 1 MKFLITGANGQLGQELQKLLRERELDFVAFDSTQLDITSREAVLATFESVKPDVILHAAA 60 Query: 60 YTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ E+ + +N G +A A IG + +STDYVFDG E P Sbjct: 61 YTKVDLAEDDGREVNWQVNVNGTKNVADAVKKIGAKVVAVSTDYVFDGTQNNDYVETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA ++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLATTHPRLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT R + + +L++ T G++H+ ++ G +W DFA I + Sbjct: 181 LGRPT----WTRTLAEFMLHLVDVKATY--GVYHL-SNTGTTTWFDFAREILKNTDVEIA 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + ++P KA+RP +S + K A + I W+E + L+ + Sbjct: 234 P------VTSAEFPQKAYRPRHSVMSLDK-AESTGFEILNWREALNAFLMGL 278 >gi|255534366|ref|YP_003094737.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriaceae bacterium 3519-10] gi|255340562|gb|ACU06675.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriaceae bacterium 3519-10] Length = 286 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 146/286 (51%), Gaps = 13/286 (4%) Query: 2 KCLVIGNNGQIAQSLSSM---CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K LV+G NGQ+ + E +D+ +F P IN A Sbjct: 3 KILVVGGNGQLGNCFRKIEPDFENQFEFNFTDSETLDITDSSAVEEYFAEHRPHFCINAA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE+EPE F++NAE G +A+A I+ISTDYVF G ++ E T Sbjct: 63 AYTAVDQAENEPEKVFAVNAEAVGNLAEACAEYKTVLIHISTDYVFSGDTQISYSEDGFT 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG SKL GEE +++RT+W+YS F NF+ +ML L ++ E+ +V DQ Sbjct: 123 DPQGVYGASKLKGEELALENNPKTIVIRTSWLYSEFNKNFVKTMLNLFAQKDELGIVNDQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT+A +A A+++I ++ GIFH ++ +W F + I AE Sbjct: 183 FGQPTNANDLADAVMRIIL-----TEAKTFGIFHF-SNYPETTWFSFTQKI----AELSN 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 K+ I T Q+PT A RP S + K+ +T+ I + W+ + Sbjct: 233 SNIKLNPITTDQFPTPAKRPKRSTMSLDKIESTYRIELQHWENSLE 278 >gi|259503870|ref|ZP_05746772.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus antri DSM 16041] gi|259168171|gb|EEW52666.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus antri DSM 16041] Length = 280 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 158/291 (54%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G NGQ+ L + + + ++D+ F + P+V+ + AA+ Sbjct: 3 KIMITGANGQLGTELRHLLDEKGIAYDAFDSREMDITDRAAVDQRFAACRPEVVFHCAAF 62 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AEDE ++ +++N G +A+AA G +YISTDYVFDG + +PTN Sbjct: 63 TAVDPAEDEKKDLNWAVNETGTKNVAEAAQRAGATLVYISTDYVFDGTNEGEYQTDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ V + Y I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQ Sbjct: 123 PKNEYGKAKLAGEQLVEKIMDKYYIIRTSWVFGQYGRNFVYTMLRLAKDHDRLTVVADQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I + G + ++ DG SW +FA I +G P Sbjct: 183 GRPTWTRTLAEFMLYAVQHQIPS------GRYQLSNDGS-CSWYEFASEIL-----KGQP 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP KA+RP +S + K+ IS W+E ++N L + Sbjct: 231 V-EVAPVTSEEYPQKAYRPRHSIMSLDKVKAVGFTPIS-WQEALQNFLKQV 279 >gi|313206547|ref|YP_004045724.1| dtdp-4-dehydrorhamnose reductase [Riemerella anatipestifer DSM 15868] gi|312445863|gb|ADQ82218.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer DSM 15868] gi|315023457|gb|EFT36465.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer RA-YM] gi|325336005|gb|ADZ12279.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer RA-GD] Length = 287 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 106/282 (37%), Positives = 148/282 (52%), Gaps = 14/282 (4%) Query: 2 KCLVIGNNGQIA---QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K LV G GQ+ + L Q + + + ++D+ F P V IN A Sbjct: 3 KILVTGAGGQLGNCFKKLEQNYPQYNFVFKTSK-ELDITDEGAVLDIFNEEKPSVCINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE E E A++INA G +AKA I+ISTDYVFDG + P E T Sbjct: 62 AYTAVDLAEQEQEKAYNINANGVENLAKACQENQTLLIHISTDYVFDGDTNLPYSEDDFT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL +YGKSKL GEE N +++RT+W+YS F NF+ +ML L ++ E+++V DQ Sbjct: 122 NPLGVYGKSKLRGEELALENNPNTIVIRTSWLYSEFNKNFVKTMLHLFSQKDELNIVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT+A +A A+++I IE + GI+H ++ +W +FA I E Sbjct: 182 FGQPTNANDLAEAVMKI----IETPSKKM-GIYHF-SNYSETTWYEFATKI----KEFSK 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 K+ I T+ YPT A RP S K+ + I I W+ Sbjct: 232 SNIKLNPIPTEAYPTPAKRPHRSTFALDKIEKDYQIEIKYWQ 273 >gi|304438295|ref|ZP_07398236.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368661|gb|EFM22345.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 304 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 147/289 (50%), Gaps = 23/289 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-----EIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G GQ+ CV++ E+ V L + + PD I+ Sbjct: 9 MKILITGATGQLGYD----CVKEFRARGHEVHGVSSELFPLSDENVMRAVIEATEPDAIL 64 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAVDKAEDEP INA G +A+ A GI +YISTDYVF G TP + Sbjct: 65 HAAAYTAVDKAEDEPARCRLINAAGTEILARLAAERGIRLLYISTDYVFPGTGTTPYETD 124 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T P N+YG SKL GEE V ++ + Y I+R +WV+ I G NF+ +ML LA+E + +SVV Sbjct: 125 DMTGPRNVYGASKLMGEEAVMAHLSQYFIVRISWVFGIHGKNFVKTMLTLAQEHKSLSVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESA 234 DQ G+PT +A +L+ + S + GI+H T +G SWA FA +F Sbjct: 185 GDQVGSPTYTHDLA--------SLLADMIASEKYGIYHATNEGF-CSWAQFAAEVF---- 231 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G V + T YPTKA RP S L L R+ W+ V Sbjct: 232 RAAGKAVSVTSVPTHSYPTKAVRPLNSRLSKKSLDAAGFRRLPPWQNAV 280 >gi|257867755|ref|ZP_05647408.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC30] gi|257874082|ref|ZP_05653735.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC10] gi|257801838|gb|EEV30741.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC30] gi|257808246|gb|EEV37068.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC10] Length = 286 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 160/290 (55%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + + ++D+ K +F P VI + AAYTA Sbjct: 6 LLTGGNGQLGTELRHLLDEKGLNYVSTDAQEMDITDEKATLAFIQELKPTVIYHCAAYTA 65 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNP 120 VDKAEDE E+ IN G +AKAA ++G +YISTDYVFDG + + E NP Sbjct: 66 VDKAEDEGKELDEKINVNGTENVAKAAKAVGAKFVYISTDYVFDGTKKEGVYKETDTPNP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KL GE+ V + Y I+RT+WV+ +G NF+ +M RLA+ ++VV DQ+G Sbjct: 126 QNEYGRTKLLGEQAVKDLLDEYFIIRTSWVFGKYGHNFVYTMKRLAQTHPRLTVVDDQYG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ I N N+D GI+H++ D SW +FA+ I E+ P Sbjct: 186 RPTWTRTLAEFMVYIIEN---NAD---YGIYHLSNDNS-CSWYEFAKEILKETDVEVAP- 237 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + +YP KA RP YS LD +K NT + I TW+E + ++ ++ Sbjct: 238 -----VTSAEYPQKAKRPQYSVLDLTKAKNTGFV-IPTWEEALADMTASL 281 >gi|149195144|ref|ZP_01872235.1| dTDP-4-dehydrorhamnose reductase [Caminibacter mediatlanticus TB-2] gi|149134696|gb|EDM23181.1| dTDP-4-dehydrorhamnose reductase [Caminibacter mediatlanticus TB-2] Length = 307 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 113/303 (37%), Positives = 166/303 (54%), Gaps = 21/303 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 + L+ G+NGQ+ L + + + + + D+D+ + F +IIN Sbjct: 4 INILITGSNGQLGSELRMLNDKFKMLNYRCFFIDKNDLDITDFQRVKDFIEKNDIKIIIN 63 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE+E E+A IN + +AK + I ++ISTDYVF+G + P E Sbjct: 64 TAAYTAVDKAEEEKELAELINYKAVENLAKISKEKDIFLVHISTDYVFNGKNYRPYVEED 123 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+P+N YG +KL GEE + VI+RT+WVYS FG NF+ +ML LAK ++E++++ Sbjct: 124 KTDPINYYGLTKLKGEEAIKKINPKGVIIRTSWVYSSFGKNFVKTMLNLAKTKKELNIIF 183 Query: 177 DQFGTPTSALQIARAIIQI--AHNLIENSDTSLRG----------IFHMTADGGPVSWAD 224 DQ GTPT A +A I++I I +S+ +L I+H + + G SW D Sbjct: 184 DQIGTPTYARDLAEVILRILDVKFKITDSNNNLTSNIKHLPSNVEIYHYSNE-GVCSWYD 242 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA+ IF E G KV I +K YPT A RP YS L+ SK+ NI+I W + ++ Sbjct: 243 FAKAIF----EIEGIDIKVNPIESKDYPTPAKRPFYSVLNKSKIKRDFNIKIPYWIDSLK 298 Query: 285 NIL 287 L Sbjct: 299 ECL 301 >gi|116491427|ref|YP_810971.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni PSU-1] gi|116092152|gb|ABJ57306.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni PSU-1] Length = 283 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 161/287 (56%), Gaps = 18/287 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AA Sbjct: 5 MKYMITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAA 64 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PT Sbjct: 65 YTKVDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPT 124 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ Sbjct: 125 NPKNEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQ 184 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I+ LI++ + G ++++ + G SW DFA+ I Sbjct: 185 VGRPTWTKTLAEFILY----LIDHQ--AAYGTYNLS-NRGTASWYDFAKEIL-------N 230 Query: 239 PYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 YS ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 231 NYSLEIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 276 >gi|254496077|ref|ZP_05108978.1| dTDP-4-dehydrorhamnose reductase [Legionella drancourtii LLAP12] gi|254354719|gb|EET13353.1| dTDP-4-dehydrorhamnose reductase [Legionella drancourtii LLAP12] Length = 312 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQI + LS + ++ +GR ++DL PD+I+N AAY Sbjct: 15 MKILLFGRKGQIGRELSRSLLPLGQLTTLGREELDLTDLNALIHVLKQLQPDIIVNAAAY 74 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A+ +N + +A A I+ STDYVFDG + E P P Sbjct: 75 TAVDKAEQEQTQAYCVNEQAVAVMADYAQQHNTLLIHYSTDYVFDGTKQGAYIESDPRTP 134 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IYG SK AGE + + I RT+WV+S G NF+ ++L LA+++ +++V DQ+G Sbjct: 135 LSIYGASKSAGEVAIENSGCRGYIFRTSWVFSQHGHNFIKTILNLARQKDALTIVADQYG 194 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA I+ + + + GI+H+TA+ G SW A Y+ ++ + + Sbjct: 195 APTSAELISDVTLLAIYA--AQKGQLMPGIYHLTAN-GITSWHGLACYLLEKTRVQQIDF 251 Query: 241 ----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 SK+ + ++ YP A RP S LD S L+ I W V ++ + Sbjct: 252 NLVPSKIQPVLSEAYPLPAVRPKNSALDTSALSGALQIVFPDWSIYVDRMITQL 305 >gi|75758502|ref|ZP_00738623.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904958|ref|ZP_04069010.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] gi|74494029|gb|EAO57124.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228854700|gb|EEM99306.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] Length = 282 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 17/287 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ +S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLMQVLSRTHHELYGVNRTTLDITNKIKVSSYLDRLKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE +A+ N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKNKGLAYEANVLGTKYIAEAAGRIKCKFVYISTDYVFDGEKHTPYNLEDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT + I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEHFVKKYTKKHFIIRTSWIFGKGDGHFIAKIRKIANLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT AL +A I ++ T G++H+T + G SW +FA F + Sbjct: 181 GSPTYALDLANFIAELI-------KTDQYGLYHVTNE-GICSWHEFAVEFFKDFNTD--- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL--DCSKLANTHNIRISTWKEGVR 284 + + T+++P +RP YS L DC L +R WKE ++ Sbjct: 230 -INIIPLTTEEFPQAVNRPKYSVLSKDCIILNGLKPLR--HWKEALK 273 >gi|295695519|ref|YP_003588757.1| dTDP-4-dehydrorhamnose reductase [Bacillus tusciae DSM 2912] gi|295411121|gb|ADG05613.1| dTDP-4-dehydrorhamnose reductase [Bacillus tusciae DSM 2912] Length = 286 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 163/287 (56%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +V G NGQ+ L + + ++ D+D+ + P+V+I+ AAY Sbjct: 1 MKIIVTGANGQLGCDLIRVLETEATVVPFSHRDLDVADNDRVSQVIEDVRPEVVIHAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE +P+ AF +NA GA +A AA+++G +Y+STDYVFDG + EF +P Sbjct: 61 TRVDEAERDPDEAFRVNAIGARNVAAAAEAVGAKVVYVSTDYVFDG-KKPSYSEFDTPSP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGE+ A + + I+RT+W+Y G NF+ +ML LA++ + + VV DQ G Sbjct: 120 INVYGRSKLAGEQMTALFNRRHFIVRTSWLYGRNGKNFVKTMLELARQGKPVRVVNDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +AR I ++ T+L G +H ++ G SW +FA+ IF E+ G Sbjct: 180 SPTYTMDLARFIGRLI-------STNLFGTYH-ASNSGSCSWYEFAKAIFEEA---GFSD 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I +++ A RPA+S LD + + W+E +R+ + Sbjct: 229 VQVEPISSRELARAAARPAFSVLDHQAIRLNRLEDLRPWREALRDFV 275 >gi|118587027|ref|ZP_01544458.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni ATCC BAA-1163] gi|118432548|gb|EAV39283.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni ATCC BAA-1163] Length = 289 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 161/287 (56%), Gaps = 18/287 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AA Sbjct: 11 MKYMITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAA 70 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PT Sbjct: 71 YTKVDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPT 130 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ Sbjct: 131 NPKNEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQ 190 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I+ LI++ + G ++++ + G SW DFA+ I Sbjct: 191 VGRPTWTKTLAEFILY----LIDHQ--AAYGTYNLS-NRGTASWYDFAKEIL-------N 236 Query: 239 PYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 YS ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 237 NYSLEIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 282 >gi|284047224|ref|YP_003397564.1| dTDP-4-dehydrorhamnose reductase [Conexibacter woesei DSM 14684] gi|283951445|gb|ADB54189.1| dTDP-4-dehydrorhamnose reductase [Conexibacter woesei DSM 14684] Length = 290 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 164/290 (56%), Gaps = 15/290 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G G + Q ++ ++ + R D+D+ A+ + +PD ++N AA+ Sbjct: 4 KLLVTGAAGMLGQDVARAARAAGHDVTALARADLDVTDGAAVAAVVTAAAPDAVVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---LSRTPIDEFSP 117 T VD AED PE A ++NA+ AG +A+AA S G +++STDYVFDG P E Sbjct: 64 TNVDGAEDAPEGAHAVNADAAGHLARAATSAGARLVHVSTDYVFDGQRAAGAAPYVESDA 123 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP ++YG++KLAGE+ VA+ ++ I+R++W++ + G+NF +MLRL ER E++VV D Sbjct: 124 TNPQSVYGRTKLAGEQAVAAADGSHAIVRSSWLFGVSGANFAATMLRLGAERDEVTVVED 183 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT+ +A A++ +A + +G+FH+ G PVSW FA IF ++ Sbjct: 184 QVGCPTATADLAEALVALAVGAAREA----QGVFHVAGGGEPVSWNAFASEIFRQA---- 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V T + P A RP +S L + A+T + W++G+ L Sbjct: 236 GVDCRVLPCTTAEMPRPAPRPPFSALTTER-ADT--PLLPPWQDGLTRFL 282 >gi|312136513|ref|YP_004003850.1| dtdp-4-dehydrorhamnose reductase [Methanothermus fervidus DSM 2088] gi|311224232|gb|ADP77088.1| dTDP-4-dehydrorhamnose reductase [Methanothermus fervidus DSM 2088] Length = 280 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G+ G + + L ++ + E+ V D D+ + F+P+V+I+ AA+ Sbjct: 1 MKVLVTGSTGMLGKELINVLKDEYEVKGVSSKDFDIRNLNETIEGIKEFNPEVVIHTAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +E + ++A+ +N+ G +A A + +YISTDYVFDG +P E+ NP Sbjct: 61 TDVDGSEHKKDLAYKVNSIGTRNVAVACNITNSSLLYISTDYVFDGKKGSPYYEYDKPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YGK+K GE V N + I+RT+W+Y +GSNF+ +ML+LA+ + EI VV DQ G Sbjct: 121 INVYGKTKYLGEVYVRDLLNKFYIVRTSWLYGPYGSNFVDTMLQLAENKDEIKVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT L ++ AI ++ GI+H+T + G SW +FA+ IF E Sbjct: 181 SPTYTLDLSLAIKKLIKE-------PRYGIYHLT-NSGHCSWYEFAKQIFKEMNLD---- 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I T++ A RP +S L ++ +K+ ++N L I Sbjct: 229 VKLTPIKTEESRRPAKRPKFSVLKNYNWEVEGFKKLRHYKDALKNYLRRI 278 >gi|170756261|ref|YP_001782318.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str. Okra] gi|169121473|gb|ACA45309.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str. Okra] Length = 298 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 155/297 (52%), Gaps = 25/297 (8%) Query: 1 MKCLVIGNNGQIAQSL--------SSMCVQD-----VEIIRVGRPDIDLLKPKDFASFFL 47 +K L+ G GQ+ + S + V D EII ++D+ F Sbjct: 2 VKILITGAKGQLGSQIVNILKASKSELGVIDNIYINTEIIATDSKELDITNLNSAKRFME 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+++IN AAYT VD ED E+AF +N+ GA +A A + I I+ISTDYVF+G Sbjct: 62 KCLPNIVINCAAYTNVDSCEDNYELAFKVNSLGARNLAIACEKIKAKLIHISTDYVFEGN 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + P E+ NP+++YGKSKL GE V + + Y I+RT+W+Y G+NF+ ++++ AK Sbjct: 122 GQAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYGYSGNNFVKTIIKAAK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R++ VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 182 GKRQLQVVDDQIGNPTNAEDLAYHILKLPL-------TEEYGIYHCTG-SGECSWYDFAC 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I E KV R+ + + KA RP +S LD L T + W++ ++ Sbjct: 234 KI----VEFYNIDCKVDRMKSDKLNRKAKRPYFSSLDNMMLRCTIGDEMRNWQDALK 286 >gi|40388618|gb|AAR85523.1| RmlD [Thermoanaerobacterium thermosaccharolyticum] Length = 294 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 156/300 (52%), Gaps = 25/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC---------VQDV----EIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L S+ + D+ +I V D+D+ D + Sbjct: 1 MKLLITGARGQLGIQLRSVLERGKSELGKIDDIYSNADIKYVSHNDLDITNLNDVLDYVE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P+ IIN AAYT VD+ E + + AF +NA G +A A+ + ++ISTDYVF G Sbjct: 61 QYKPNAIINCAAYTNVDRCESDIDNAFKVNAIGPRNLAIASHIVDAKLLHISTDYVFSGE 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP+++YGKSKL GE+ V + + Y I+RTAW+Y +G NF+ +++ AK Sbjct: 121 GNEPYKEYDMPNPVSVYGKSKLLGEQYVRDFCDKYFIVRTAWLYGKYGKNFVYTIINAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER + VV DQ G PT+A +A I+++ T GI+H T + G SW DFA Sbjct: 181 ERGYLEVVNDQRGNPTNAEDLAYHILKLIL-------TDEYGIYHCTGN-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I E +V I + + +A RP+YS LD L T ++ W + +++ + Sbjct: 233 KI----VEYTDIKCRVMSITSDKIKREAKRPSYSSLDNMMLRCTIGDKMRNWDDALKSFI 288 >gi|319942932|ref|ZP_08017215.1| dTDP-4-dehydrorhamnose reductase [Lautropia mirabilis ATCC 51599] gi|319743474|gb|EFV95878.1| dTDP-4-dehydrorhamnose reductase [Lautropia mirabilis ATCC 51599] Length = 308 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 20/306 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +V G GQ+ L E++ V D+DL + PDV++NPAA+ Sbjct: 1 MKFVVTGTTGQVGWELVRALQPLGEVVPVSIDDLDLTDAEATRRLLDRVKPDVVVNPAAH 60 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAE E E+A +NA+ +A + G ++ STDYVF+G P E T Sbjct: 61 TAVDKAETEQQELARVLNADVPAVLADWCKAHGALLVHYSTDYVFNGEGTRPWKEDDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +KLAGE+ + ++ILRT WVYS+ G NFL +M+RLA R + VV DQ+ Sbjct: 121 PLNVYGATKLAGEQAIQKSGCAHLILRTCWVYSLHGGNFLKTMVRLASSRDHLKVVADQY 180 Query: 180 GTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY---IFWE--- 232 G PT A IA + I + GI ++ A G +W +A+ + E Sbjct: 181 GVPTPASFIADVTAELIRRRSFDPKLADWSGILNL-APSGETTWHGYAQTGLKLLHEATL 239 Query: 233 -----SAERGGPYSKVYRIFT------KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +A+R P +V R+ T ++P + RP+ S LD S++ +R+ W E Sbjct: 240 AAGENTAQRPRPEWQVPRMPTLEAVPATEFPVPSKRPSNSRLDLSRIQQVWGLRMPPWDE 299 Query: 282 GVRNIL 287 ++ +L Sbjct: 300 LLKTVL 305 >gi|261416705|ref|YP_003250388.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373161|gb|ACX75906.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326043|gb|ADL25244.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 306 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 111/313 (35%), Positives = 164/313 (52%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK LV G GQ+ + + + D+ + G D +D+ Sbjct: 1 MKVLVTGVGGQLGHDVMNELAKRGYEGVGSDIAPVYSGVADGSAVTTMPYVSMDITNAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 A S +PDVI++ AA+TAVD AEDE + A F+INAEG IA+ A I +YIS Sbjct: 61 VAETIKSVNPDVIVHCAAWTAVDLAEDEDKKAKVFAINAEGTENIARVAKEIDAKMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G +P + PLN+YG+SKL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFNGRGTSPWKPDCKDYEPLNVYGESKLKGELAVSGTLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ + + VV DQ GTPT L ++R ++ ++IE T G +H T +GG Sbjct: 181 IKTMLKVGETHDTVRVVYDQIGTPTYTLDLSRLLV----DMIE---TDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW +F + I+ ++ G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 FISWYEFTKEIY----KQAGLPTKVLPVTTAEYGLSKAARPFNSRLDKSKLVEAGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALGRYLKEI 302 >gi|160881797|ref|YP_001560765.1| dTDP-4-dehydrorhamnose reductase [Clostridium phytofermentans ISDg] gi|160430463|gb|ABX44026.1| dTDP-4-dehydrorhamnose reductase [Clostridium phytofermentans ISDg] Length = 285 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G NGQ+ + + + + R D+D+ +P+ +IN AA Sbjct: 1 MRVVVTGVNGQLGYDVVKELEKHGLTAFGLTRKDLDITDKDQVIRTIRDINPEAVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE+E E S NA A +A A I IY+STDYVF G P + Sbjct: 61 YTAVDLAEEEKEETLSANALAASYLAIACAGIHAKMIYLSTDYVFSGEGEKPYEVCDQVA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++K GE+ V ++ I+R +WV+ G NF+ +MLRL++ER +SVV DQ Sbjct: 121 PINWYGQTKYEGEQAVIRELDSCFIVRVSWVFGKNGKNFVKTMLRLSEERNTVSVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A+ ++ + T GI+H+T +G SW DFA+ IF S G Sbjct: 181 GSPTYTVDLAKCLVAMIK-------TDKYGIYHVTNEGF-CSWYDFAKEIFRMS----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + ++PTKA RP S L KL R+ TW++ + L + Sbjct: 229 NTTVQPLTSDEFPTKAKRPKNSRLSKEKLTEQGFERLPTWQDALSRYLYEL 279 >gi|254556202|ref|YP_003062619.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum JDM1] gi|254045129|gb|ACT61922.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum JDM1] Length = 280 Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 155/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + Q++ + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQEIAFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + + G + ++ D +W DFA+ I ++ P Sbjct: 183 GRPTWTRTLAEFMVHLVKT------EAASGTYQLSND-NTATWYDFAKEILKDTDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + ++Q+P KA+RP +S ++ K A +I TW++ + L ++ Sbjct: 236 ------VTSEQFPQKAYRPQHSVMNLDK-AKATGYKILTWQDALNEFLKSL 279 >gi|167765913|ref|ZP_02437966.1| hypothetical protein CLOSS21_00404 [Clostridium sp. SS2/1] gi|167712411|gb|EDS22990.1| hypothetical protein CLOSS21_00404 [Clostridium sp. SS2/1] gi|291559811|emb|CBL38611.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SSC/2] Length = 281 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ ++ + Q +E I V ++D+ +PD +I+ AA Sbjct: 1 MRVFVTGVKGQLGYDVMNELEKQGLEGIGVDIDEMDITDADQVNKVIKEAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NA+G IAK + + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNEEICRKVNAQGTENIAKVCEELDIKMMYISTDYVFNGQGERPWEPDDKRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + +R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEEHVKKFFTVRIAWVFGVNGKNFIKTMLNLGKTHDHLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GICTWYEFACEIF----KQAGM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP+ S +D SKL + TW++ + L I Sbjct: 229 NVSVAPVSSDEYPAKAKRPSNSRMDKSKLTANGFTPLPTWQDALSRYLKEI 279 >gi|20092574|ref|NP_618649.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina acetivorans C2A] gi|19917849|gb|AAM07129.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina acetivorans C2A] Length = 269 Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 156/287 (54%), Gaps = 28/287 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L++G NG + L C + I++ ++D+ L +P ++IN AAY Sbjct: 6 IKTLILGANGMLGFDL---CKAFPDAIKLTHRELDITNRDQVLESILRINPKLVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+ ED+ E+AF +N G G IA+A + IG ++ STDYVFDG + ++ +P NP Sbjct: 63 TDVEGCEDQQELAFQVNGYGPGYIAEACNKIGAILVHFSTDYVFDGSKKEYVESDAP-NP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SKL GE+K+ ++Y I+R +W++ G NF+ +ML+L+ E E+ VV DQFG Sbjct: 122 INIYGHSKLLGEKKIIESMDDYRIIRISWLFGTHGRNFVETMLKLSGEIAEVKVVNDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I + L+E GI+H+T D G SW +FA + P Sbjct: 182 KPTYTVDLAHKISE----LVELDP----GIYHITND-GICSWYEFASSFIRNAV----PC 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS L NT + WKE ++ L Sbjct: 229 T------SEEFPRKAKRPKYSV-----LVNTKIEPMRHWKEALKAYL 264 >gi|326403406|ref|YP_004283487.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325050267|dbj|BAJ80605.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 110/289 (38%), Positives = 151/289 (52%), Gaps = 3/289 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ +L++ R +GRP D P+ A + P +++N AA+TA Sbjct: 7 LITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + AF N +G +A S GIP I++STDYVFDG P E P PL Sbjct: 67 VDAAETSADAAFRANRDGPATLATLCRSRGIPLIHVSTDYVFDGTKGAPYTETDPIAPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK AGEE + + + +ILRTAWV+S G NF +M+ A+ + VV DQ GTP Sbjct: 127 VYGHSKAAGEEAILAAGADAIILRTAWVFSATGKNFARTMIAAARRLPALRVVADQRGTP 186 Query: 183 TSA-LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 187 TAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPHP 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL+ T + + WK+ I+ I Sbjct: 246 DIIPIATADWPTPARRPADSRLDTTKLSQTFALALPHWKDATARIVPAI 294 >gi|28377964|ref|NP_784856.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum WCFS1] gi|28270798|emb|CAD63703.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum WCFS1] Length = 280 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + Q++ + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQEIAFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + +L++ S G + ++ D +W DFA+ I + P Sbjct: 183 GRPT----WTRTLAEFMAHLVKTEAAS--GTYQLSND-NTATWYDFAKEILKNTDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + ++Q+P KA+RP +S ++ K A I TW+E + L ++ Sbjct: 236 ------VTSEQFPQKAYRPQHSVMNLDK-AKATGYHILTWQEALSEFLESL 279 >gi|163853096|ref|YP_001641139.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] gi|163664701|gb|ABY32068.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] Length = 296 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L ++ E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQALSWP--EGVRVHAPDRQSLDITDEATVAAALDARTYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVED 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + + + G FH DG +W DFA I SA RG Sbjct: 179 QHGCPTSAADLA-GALAAIALRLAGDEAAPTGSFHCVNDGA-TTWCDFARAIVAGSARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I + YPT A RP S L L + + + +W+ + +IL Sbjct: 237 GRSVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDIL 286 >gi|71065770|ref|YP_264497.1| putative dTDP-4-dehydrorhamnose reductase [Psychrobacter arcticus 273-4] gi|71038755|gb|AAZ19063.1| putative dTDP-4-dehydrorhamnose reductase [Psychrobacter arcticus 273-4] Length = 301 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 152/297 (51%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF------FLSFSPDVI 54 MK +++G NGQ+ L +I + R D D +F + + PDV+ Sbjct: 1 MKIVLLGKNGQVGWELQRALQPLGHVISLDRQMNDNGLCGDITNFTAIEQLYATIEPDVV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYT VDKAE + + A IN +A + I S+DYVFDG TP E Sbjct: 61 INAAAYTTVDKAESDYKQADLINHLAVKHLADMSKHFNSLLINYSSDYVFDGTLDTPWSE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P+N YG++K GE + ++ RT+WVY G+NF+ +ML+LA+ + E+++ Sbjct: 121 TDDRMPINNYGRTKYDGEMALEKSGARFINFRTSWVYGTHGNNFIKTMLKLAQSKEELNI 180 Query: 175 VCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + DQ G PT A IA Q + + L+ +SL G +++ A G SW D+AE+IF + Sbjct: 181 IADQIGAPTGAALIADITAQALRYYLLNKQPSSLHGHYNLAAK-GECSWFDYAEFIFATA 239 Query: 234 AERGGP---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G ++ I T QYPT A RP S L+ KL + + W++GV +L Sbjct: 240 QKNIGTELLIKQLNPIPTSQYPTPAKRPLNSRLNTEKLQTHFQLHLPHWQQGVAQVL 296 >gi|225574470|ref|ZP_03783080.1| hypothetical protein RUMHYD_02545 [Blautia hydrogenotrophica DSM 10507] gi|225038320|gb|EEG48566.1| hypothetical protein RUMHYD_02545 [Blautia hydrogenotrophica DSM 10507] Length = 281 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 153/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ ++ + + E + V ++D+ + D +++ AA Sbjct: 1 MRVLVTGVKGQLGYDVMNELAKRGYEGVGVDVDEMDITDARKVDEVITKAQVDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NAEG IAK + +P +Y+STDYVFDG P + + Sbjct: 61 YTAVDAAEDNVELCRRVNAEGTENIAKVCKRLDLPMVYLSTDYVFDGEGERPWEPDDERD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + Y I+R AWV+ + G NF+ +ML LA+ I+VV DQ Sbjct: 121 PLNVYGQTKYEGELAVERNLDKYFIVRIAWVFGVNGKNFIKTMLNLAQNHDTITVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE T G +H T + G +W +FA+ IF + G Sbjct: 181 GSPTYTYDLARLLV----DMIE---TEKYGRYHATNE-GLCTWYEFAKEIF----RQAGV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++Q+ KA RP S ++ KL R+ +W++ + L Sbjct: 229 DVKVVPVTSEQFQAKARRPHNSRMNKDKLEAMGFQRLPSWQDALSRYL 276 >gi|328957827|ref|YP_004375213.1| dTDP-4-dehydrorhamnose reductase [Carnobacterium sp. 17-4] gi|328674151|gb|AEB30197.1| dTDP-4-dehydrorhamnose reductase [Carnobacterium sp. 17-4] Length = 278 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 16/286 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +D+ + G ++D+ F + P VI + AAYTA Sbjct: 3 LITGANGQLGTELKKVLDEKDLTYVATGSKELDVADKSAVHQFVSALKPSVIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE+E E +N G IA+ A+ +G +YISTDYVFDG ++ S NP Sbjct: 63 VDAAEEEGKEFNQLVNIIGTRNIAETAEEVGAELVYISTDYVFDGTNQDEYRVDSLPNPK 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG++KL GE+ V + I+RT+WV+ FG NF+ +M LA+ ++VV DQ G Sbjct: 123 NEYGRAKLEGEKIVQEISTKAYIIRTSWVFGEFGKNFVFTMQHLAETHSRLTVVSDQVGR 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A ++ + E G++H++ + G SW +FA I +++ P Sbjct: 183 PTWTRTLAEFMLHLTATHQE------YGLYHLSNE-GECSWYEFATEILKDTSVEVAP-- 233 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + +++YP KA+RP +S LD SK +T I TW+E + + Sbjct: 234 ----VTSEEYPQKAYRPKHSVLDLSKAKST-GFNIPTWQEALEEFM 274 >gi|323144613|ref|ZP_08079201.1| dTDP-4-dehydrorhamnose reductase [Succinatimonas hippei YIT 12066] gi|322415622|gb|EFY06368.1| dTDP-4-dehydrorhamnose reductase [Succinatimonas hippei YIT 12066] Length = 298 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 11/286 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ + L +C+ + E+I +D+ + S D+IIN AA Sbjct: 3 RVLLTGAYGQVGKELE-VCLLNSEDEVISCDHRALDISQEDRVLSAVTESGADIIINAAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+KAEDE A+ +NA G +AKAA IP I+ISTDYVF + P E Sbjct: 62 YTNVEKAEDERVKAYEVNAYGPKYLAKAAKLADIPLIHISTDYVFSSENGRPHREDDTVE 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YGKSKL GEE + + + Y+I+R++W++ +G+NF+ +MLRLA + +SVV DQ Sbjct: 122 AQCVYGKSKLEGEENIIACCSKYLIVRSSWIFGRYGNNFVKTMLRLAGKYDAVSVVSDQK 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGG 238 G PT A +A A+ + H ++ D GI+H G P ++W +FA +F + A+ G Sbjct: 182 GNPTPARALAEALCIMTHEALK-PDFKDYGIYHFA--GNPAITWDEFARSVF-KYAKLAG 237 Query: 239 PYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 K V I K YP+KA RP S LD +K+ I + W + Sbjct: 238 FIQKDMVVKSILAKDYPSKAVRPYDSRLDTNKINEVFKIDLPDWHD 283 >gi|115350808|ref|YP_772647.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115280796|gb|ABI86313.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 298 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 110/288 (38%), Positives = 148/288 (51%), Gaps = 7/288 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQI L ++ R +DL +F P +I+NPAAYTAV Sbjct: 12 LVTGVTGQIGFELLRALQGLGRVVPCDRSVLDLADLDRVRAFARDLKPALIVNPAAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE E E+A +N + A+ A G I+ STDYVFDG E NPLN Sbjct: 72 DTAESEVELARRLNVDVPRVFAEEAARSGGTLIHYSTDYVFDGTKVGAYVETDAPNPLNA 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE+ +A+ +VILRT+WVY G NFL +ML+L ER E+ +V DQ G PT Sbjct: 132 YGATKLEGEQAIAATGCAHVILRTSWVYGRRGRNFLRTMLKLGAERPELRIVADQVGAPT 191 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 A IA A I ++DT G++H+T+ G SW FAE IF + P Sbjct: 192 WAATIAAATSHIIAQAAASADTDWWARRAGVYHLTS-AGATSWCGFAEAIFGIAMASHAP 250 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + YPT A RPA S + KLA +++ W++ ++ L Sbjct: 251 --RVVPISSDDYPTPAKRPANSKMALGKLAEVFGMQMPDWRDALQLCL 296 >gi|312868793|ref|ZP_07728984.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus oris PB013-T2-3] gi|311095692|gb|EFQ53945.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus oris PB013-T2-3] Length = 280 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 155/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L + Q +E +D+ + F + P+++ + AA+ Sbjct: 3 KILITGANGQLGTELRHLLDEQGIEYSAFDSQSMDITDKATVDARFNTEQPEIVFHCAAF 62 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AEDE ++ +++N G +A+AA G +YISTDYVFDG + +PTN Sbjct: 63 TAVDPAEDEKKDLNWAVNEAGTKNVAEAAQQAGATLVYISTDYVFDGTNEGEYQVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ V + Y I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQ Sbjct: 123 PKNEYGKAKLAGEQLVEQIMDKYYIIRTSWVFGQYGKNFVYTMLRLAKDHDRLTVVADQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I ++ ++ DG SW +FA I + P Sbjct: 183 GRPTWTRTLAEFMLYAVQHQIPFD------LYQLSNDGS-CSWYEFASEILKDQPVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +++YP KA+RP +S + K+ + IS W++ ++ L + Sbjct: 236 ------VTSEEYPQKAYRPRHSIMSLDKVKAAGFMPIS-WQDALQEFLKQV 279 >gi|160914758|ref|ZP_02076972.1| hypothetical protein EUBDOL_00765 [Eubacterium dolichum DSM 3991] gi|158433298|gb|EDP11587.1| hypothetical protein EUBDOL_00765 [Eubacterium dolichum DSM 3991] Length = 281 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 152/288 (52%), Gaps = 14/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + VE + V ++D+ K D +++ AA Sbjct: 1 MKLLVTGVKGQLGYDVVKEAEKRGVEAVGVDIDEMDITDAKQVREVITKGGYDAVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAED E +N EG IA+ + + IP +Y STDYVF+G P E+ Sbjct: 61 WTAVDKAEDMEEACRKVNKEGTENIAQVCEVLDIPIMYFSTDYVFNGQGSEPWKEYDKRA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V +++I R AWV+ G+NF+ +MLRL KER +SVV DQ Sbjct: 121 PLNVYGQTKYEGELAVEKLAKHFII-RIAWVFGKNGNNFIKTMLRLGKERGAMSVVNDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ ++ + + G +H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLAKLVLDMIQ-------SDKYGTYHATNE-GICSWYEFACEIF----KQAGM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + ++PTKA RP S ++ ++L R+ TW++ + L Sbjct: 228 NVQVTPVSSDEFPTKAKRPCNSRMNKTELDRNGFDRLPTWQDALHRYL 275 >gi|145588442|ref|YP_001155039.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046848|gb|ABP33475.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 319 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 110/287 (38%), Positives = 153/287 (53%), Gaps = 26/287 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-----QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK LV G +GQ+ ++ + + + +GR + DL P+ A+ F P++II Sbjct: 1 MKVLVFGKDGQLGKAFQQVFSALTPPHPIHVEFLGRAECDLCNPEAIATTLDKFKPNIII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVDKAE E ++A++INA +A A G ++ STDYVFDG E Sbjct: 61 NSSAYTAVDKAETEVDLAYAINARAPELMAAYAAEHGATFLHYSTDYVFDGEKYGFYLED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVA-----SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 +PL +YGKSK AGEE +A S Y ILRT+WVY G NF+ ++LRLAKER Sbjct: 121 DVRSPLGVYGKSKAAGEEGIARIFANSKLGQYAILRTSWVYGD-GGNFIRTILRLAKERE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFA 226 E+ V+ DQ+G PTSA +A Q++ L N D S++ GI+H G +W A Sbjct: 180 ELKVIADQYGVPTSAQWLA----QVSLGLTLNQDGSIKHFPSGIYH-AVPAGETTWHGLA 234 Query: 227 EYIFWESAERGGPYSKVYRIFTK-----QYPTKAHRPAYSCLDCSKL 268 + +A + G KV K +YP A RPA S + KL Sbjct: 235 T-LAVSAAIKAGVALKVQPGLIKPIPATEYPLPAPRPANSRMSTDKL 280 >gi|33865181|ref|NP_896740.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8102] gi|33638865|emb|CAE07162.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8102] Length = 302 Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 150/301 (49%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFA------SFFLSFSPDVI 54 MK L+ G GQ+ Q+L +E++ R + L D A PD + Sbjct: 1 MKVLLTGAAGQLGQALIGRMPDGIELVASSRSGGNGLVALDLADATACRQVVEEHRPDWV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVDKAE EPE+A ++N A A+A + G + +STD+VF+G +P Sbjct: 61 LNAGAYTAVDKAEAEPELAHAVNGGAPRAFAEAIQAHGGRMLQLSTDFVFNGQQGSPYRV 120 Query: 115 FSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +PL +YG SK +GE E++ + V+LRT+WV G NF L+MLRL +E+ + Sbjct: 121 DQSRDPLGVYGASKASGEKAVEELLGTSGQGVVLRTSWVMGPVGKNFALTMLRLHREKEQ 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G P+S L +A A + + + L + H DGG SW D + + Sbjct: 181 LGVVADQVGCPSSTLNLATACWAVITS--SRDEVELPPVLHWC-DGGAASWYDVSVAVGE 237 Query: 232 ESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + G + V I T YPT A RP YS LDC + W+ ++++L Sbjct: 238 LAMDLGLLQRAATVNPISTADYPTPATRPGYSLLDCQASRQVLQLEAQPWRAALKDVLQA 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|302870784|ref|YP_003839420.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis OB47] gi|302573643|gb|ADL41434.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis OB47] Length = 281 Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 99/278 (35%), Positives = 149/278 (53%), Gaps = 12/278 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+ GQ+ + + +D+ ++ + P +II+ AAYT V Sbjct: 3 LITGSKGQLGSEFIKQFENKYNVKGIDIEQVDITDLDSTVNYISAIKPSIIIHCAAYTNV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E + +IAF +NA G +A AA+ +G +YISTDYVFDG P +EF NP++I Sbjct: 63 DGCERDKDIAFKVNAIGIRNVAMAAEKVGAKLVYISTDYVFDGEKEKPYNEFDRPNPISI 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGEE V ++ + Y I+R AW+Y G+NF+ ++++LAKE+ EI VV DQ G PT Sbjct: 123 YGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKLAKEKGEIDVVNDQRGNPT 182 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + +A+ ++ NS+ GI+H+T + G SW DFA I + G KV Sbjct: 183 FTKDVVQAV-----EVMMNSEKY--GIYHVTNE-GIASWYDFACKI----VDTFGINCKV 230 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + ++ A RP S LD L ++ W+E Sbjct: 231 NPTTSDKFIRPAKRPKNSALDKMMLRLEFGYKMRRWEE 268 >gi|323701365|ref|ZP_08113039.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM 574] gi|323533624|gb|EGB23489.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM 574] Length = 284 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G G + Q + + + + ++ + R ++++ LS PD++IN AA Sbjct: 1 MIILVTGAAGMLGQDVVAELARRGHRVLPMTRTELNITDLSQVRQVILSGQPDIVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + E A IN G G +A + IP + ISTDYVF G F Sbjct: 61 YTAVDQAEQDRERAMQINGLGVGNLALVCGELEIPLVQISTDYVFSGQKPGAYTVFDQPQ 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG SKLAGE+ V + ++RT+W++ ++G+NF+ ++LRLA+ER+E++VV DQ Sbjct: 121 PINAYGWSKLAGEKYVLQLLQRFYLVRTSWLFGLYGNNFVETILRLAQERKELTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +ARA+ +LI T G++H+T + G +W A I +S G Sbjct: 181 GCPTWTQDLARAV----ADLIA---TGRYGVYHVT-NQGATTWFGLASAIISQS----GF 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T YP A RP S LD L T + +W++ + L Sbjct: 229 DTVVKPVPTSAYPRPAARPVNSVLDSFPLKETIGYLLPSWQDALARYL 276 >gi|317472317|ref|ZP_07931645.1| RmlD substrate binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900274|gb|EFV22260.1| RmlD substrate binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 281 Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + E I V ++D+ + + D +I+ AA Sbjct: 1 MKALVTGAAGQLGHDVMDELKKRGHEGIGVDVQEMDVTDAEKVRQVITAADVDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INA+G IA+ + + +YISTDYVFDG P D N Sbjct: 61 YTAVDAAEDNAELCRKINADGTEHIARVCRDLDLKMMYISTDYVFDGQGERPWDPDDERN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + I+R AWV+ + G NF+ +ML LAK ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEQNLDKFFIVRIAWVFGMNGKNFIKTMLNLAKNHDRLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLV----DMIE---TEKYGRYHATNE-GICTWYEFACEIF----KQAGI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA RP S + KL R+ W++ + L I Sbjct: 229 EIEVAPVGSDEYPAKAKRPENSRMSKDKLTQNGFERLPAWQDALARYLKEI 279 >gi|292670068|ref|ZP_06603494.1| dTDP-4-dehydrorhamnose reductase [Selenomonas noxia ATCC 43541] gi|292648256|gb|EFF66228.1| dTDP-4-dehydrorhamnose reductase [Selenomonas noxia ATCC 43541] Length = 284 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 149/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + C + E+ V L +F+PD I++ AA Sbjct: 1 MKILITGATGQLGRDCVQACKARGHEVYGVSSRMFPLSDETAMRGVLDTFAPDAILHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AEDEP + +NA G +A+ A +YISTDYVF G P + + T Sbjct: 61 YTAVDQAEDEPALCRLVNAAGTEILARLAQERNTKFLYISTDYVFPGTGTEPYETDAATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SK GEE V ++ + Y I+R +WV+ +G NF+ +ML L++ + +S+V DQ Sbjct: 121 PRNVYGASKRMGEEAVQAHLDRYFIVRISWVFGAYGRNFVKTMLALSETHKSLSIVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + +++E+ GI+H T +G SWA+FA IF G Sbjct: 181 GSPTYTHDLA----PLLADMLESEKY---GIYHATNEGF-CSWAEFAAEIF----RAAGR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + YPTKA RP S L + L R+ W++ V L + Sbjct: 229 SVNVTSVPSHAYPTKAVRPKNSRLSKASLDAAGFRRLPAWQDAVARCLEEL 279 >gi|281420693|ref|ZP_06251692.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205] gi|281405466|gb|EFB36146.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205] Length = 290 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 16/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 M LV G NGQ+ + +C Q + G +D+ VI Sbjct: 1 MNILVTGANGQLGHEMQ-ICAQKSNHKFVFTDVAEGYEKLDITNLDAIREKVSENDIQVI 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYT VDKAE + ++A +N AG +A+A + I++STDYVF G P E Sbjct: 60 VNCAAYTNVDKAETDYDLANLLNNTAAGNLAQAMKEVDGTLIHVSTDYVFQGDKNIPCRE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNPL +YGK+KLAGE+ + + ++I+RTAW+YS +G NF+ +M L + V Sbjct: 120 DWETNPLGVYGKTKLAGEKSIEATGCKHIIIRTAWLYSQWGKNFVKTMQSLTASHDTLKV 179 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I IE GI+H + + G SW DFA+ I Sbjct: 180 VFDQVGTPTYAGDLAAVISHI----IETDQLDKTGIYHFSNE-GICSWFDFAKII----C 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E G + +++++P+ RP +S LD SKL T ++ W + ++ + + Sbjct: 231 ELSGNTCDIQPCYSEEFPSPVKRPHFSVLDKSKLKQTFGFKVPYWTDSLKKCIAEL 286 >gi|154687906|ref|YP_001423067.1| SpsK [Bacillus amyloliquefaciens FZB42] gi|154353757|gb|ABS75836.1| SpsK [Bacillus amyloliquefaciens FZB42] Length = 282 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 150/287 (52%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L Q+ E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRQLKQEGYEVIALTKAMMNISDQRSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA A A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYAALEAENTGAKFIHISTDYVFSGKGTRPYQTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGHNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I L + G++H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVI----GLFDRPP----GLYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T++Y + RPAYS L + + + W+E + + L Sbjct: 230 AAVLPVTTEEYGNETPRPAYSVLSLESIER-QGLGMRHWREALHDYL 275 >gi|20502693|gb|AAM22556.1|AF343089_13 putative dTDP-6-deoxy-1-mannose-dehydrogenase [Aeromonas hydrophila] Length = 300 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L++G GQ+ ++L S Q +V GR + D+ P + + PDVIIN Sbjct: 1 MKILLLGARGQLGRALFSALRQMFPHWQVDAPGREECDITIPDVLCGWIDACRPDVIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE E E+A N + +A+ A + G ++ STDYVFDG P E Sbjct: 61 AAYTAVDEAESEQELADMANHQALLCMAREASNAGALLVHFSTDYVFDGTGARPWRETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YG SK AGE + +++I+RT W+Y G +F ++L A++ + ++VV D Sbjct: 121 PRPLNVYGMSKYAGELAIQRLCPHHLIIRTGWLYGGEGRHFARTILARARQGQALAVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +ARA + ++ + + + G++H+ G SW FA + E+ G Sbjct: 181 QWGAPTQVDWLARASVLALSQVLNSPNKA--GLYHLVCR-GETSWHGFASALVNEAFRLG 237 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V+ I + ++P +A RP S LDC ++ W+E +++ L ++ Sbjct: 238 MLKEQRNVHAIHSDEWPQQARRPLNSRLDCHHFSDLFGTEQPHWQEQMKDWLFSL 292 >gi|78065446|ref|YP_368215.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] gi|77966191|gb|ABB07571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] Length = 294 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 138/281 (49%), Gaps = 7/281 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+ L ++ R +DL + + P I+NPAAYTAV Sbjct: 8 LVTGVTGQVGFELLRSLQGLGRVVECDRSMLDLSDLDRIRAVVRALQPAFIVNPAAYTAV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AED+ + A INA+ +A+ A G I+ STDYVFDG E NPLN+ Sbjct: 68 DNAEDDVDAARRINADVPRVLAEEAARSGAVLIHYSTDYVFDGAKAGAYTETDVVNPLNV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE + + Y+ LRT+WVY G NFL +ML+L ER E+ VV DQ G PT Sbjct: 128 YGMTKLEGERAIENAGCAYLTLRTSWVYGRRGRNFLRTMLKLGAERPELRVVADQVGAPT 187 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA A I + D + G +H++A G SW FA+ I G Sbjct: 188 WSKTIAAATAHILSKGLAAHDEAWWQARSGTYHLSA-AGETSWHGFAKAIL--GIAMGDD 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V I ++P +A RPA S L KLA T + + W+ Sbjct: 245 APAVVPISASEFPVRARRPANSRLSHGKLAETFGLHLPDWE 285 >gi|148259625|ref|YP_001233752.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|148260220|ref|YP_001234347.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|146401306|gb|ABQ29833.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|146401901|gb|ABQ30428.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] Length = 301 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 109/289 (37%), Positives = 151/289 (52%), Gaps = 3/289 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ +L++ R +GRP D P+ A + P +++N AA+TA Sbjct: 7 LITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + AF N +G +A + GIP I++STDYVFDG P E P PL Sbjct: 67 VDAAETSADAAFRANRDGPATLATLCRARGIPLIHVSTDYVFDGTKGAPYTETDPIAPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK AGEE + + + +ILRTAWV+S G NF +M+ A+ + VV DQ GTP Sbjct: 127 VYGHSKAAGEEAILAAGADAIILRTAWVFSATGKNFARTMIAAARRLPALRVVADQRGTP 186 Query: 183 TSA-LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 187 TAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPHP 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL+ T + + WK+ I+ I Sbjct: 246 DIIPIATADWPTPARRPADSRLDTTKLSQTFALALPHWKDATARIVPAI 294 >gi|134294920|ref|YP_001118655.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134138077|gb|ABO53820.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 294 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 138/281 (49%), Gaps = 7/281 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+ L ++ R +DL + + P I+NPAAYTAV Sbjct: 8 LVTGVTGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRIRAVVRALEPAFIVNPAAYTAV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AED+ + A INA+ +A+ A G I+ STDYVFDG E NPLN+ Sbjct: 68 DNAEDDVDAARRINADVPRVLAEEAARSGAVLIHYSTDYVFDGAKAGAYTETDAVNPLNV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +KL GE + + Y+ LRT+WVY G NFL +ML+L ER E+ VV DQ G PT Sbjct: 128 YGTTKLEGERAIENAGCAYLTLRTSWVYGRRGRNFLRTMLKLGAERPELRVVADQVGAPT 187 Query: 184 SALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA A I + D + G +H++A G SW FA+ I G Sbjct: 188 WSKTIAAATAHILSKGLAAHDEAWWQARSGTYHLSA-AGETSWHGFAKAIL--GIAMGDD 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V I ++P +A RPA S L KLA T + + W+ Sbjct: 245 APAVVPIAASEFPVRASRPANSRLSHGKLAETFGLHLPDWE 285 >gi|332995214|gb|AEF05269.1| dTDP-4-dehydrorhamnose reductase [Alteromonas sp. SN2] Length = 286 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/291 (35%), Positives = 157/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +VIGN GQ++ L + ++ I +G D D+ + +P VIIN AAY Sbjct: 1 MSIVVIGNAGQLSFELVRILGENT--ICLGPEDTDITNESVLSETLSKLAPSVIINAAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ ++ +INA +AK G +++STDYVF+G +P P Sbjct: 59 TAVDKAEEDFDLCHAINATAVENLAKYCKQSGAFLVHVSTDYVFNGHKGSPYLTDDTIEP 118 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YGK+K GE+ + N+ ++RTAWVYS G+NF+ +MLRL ++ ++SV+ DQ Sbjct: 119 QGVYGKTKADGEKALLELLPNSSCLIRTAWVYSSHGNNFVKTMLRLMADKPQLSVIDDQI 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A + A N +G++H T D G SW DFA I E+G Sbjct: 179 GTPTWAKGLAEVCVSAAQN-------KTQGVYHWT-DEGVASWYDFALAIQELGIEKGLL 230 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANT-HNIRISTWKEGVRNIL 287 S V I + QYPT A RP YS LD + +T ++ ++ W+ + ++ Sbjct: 231 SSAIPVLPIPSSQYPTPASRPHYSVLDKTSTRDTFSSLNLTHWRTQLSAMM 281 >gi|60418018|dbj|BAD90658.1| polysaccharide synthesis enzyme [Acetobacter tropicalis] Length = 303 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 150/288 (52%), Gaps = 4/288 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+A SL ++ V VGRP D KP+ A+ + P + N AA+TAV Sbjct: 12 LVTGGTGQLATSLVTLGGPRVHC--VGRPSFDFDKPETLAATLEAVKPVAVANAAAWTAV 69 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EPE A N G +A+ IP I++STDYVF G TP E +P + Sbjct: 70 DLAEKEPEAAARANTSGPAELARLCAQQNIPLIHVSTDYVFSGDKGTPYVETDAVSPDTV 129 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K GE++ + +I RT+WVYS G NF+ +ML + + VV DQ G PT Sbjct: 130 YGSTKAEGEKQALAANPKTLIFRTSWVYSAHGKNFVRTMLNAGAKNPALKVVGDQKGNPT 189 Query: 184 SALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 S+ +ARAI+ + L ++ GI+H+ G +W A ++A+ G P Sbjct: 190 SSDDLARAILSVLAILEKDGWKDDFAGIYHVRGT-GETTWHGLAVEALKDAADHGQPMPT 248 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+ +PT A RPA S +D SKL I + W+E V+ ++ I Sbjct: 249 VTAIRTEDWPTPAKRPADSRMDNSKLTRVFGITMPAWEESVKKVVNQI 296 >gi|297205909|ref|ZP_06923304.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus jensenii JV-V16] gi|297149035|gb|EFH29333.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus jensenii JV-V16] Length = 279 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 30/299 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ L+ G NGQ+ Q L + + D + R +D+ +F P ++ + Sbjct: 1 MRILITGANGQLGQELQHLLRSRGIDDFDA--ADRTKLDITDESKVEEYFADNKPKIVYH 58 Query: 57 PAAYTAVDKAEDEPEIA-FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT----P 111 AAYTAVD AE E ++ +NA G+ IAKA + +YISTDYVFDG + P Sbjct: 59 CAAYTAVDAAEGEGKLLNEKVNALGSEIIAKACEKYNSTLVYISTDYVFDGSKESGEYMP 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 D PT P N YG++KL GE+ V Y + Y I+RTAWVY +G NF+ +ML LAK ++ Sbjct: 119 SD---PTGPRNEYGRAKLLGEKAVKKYCSKYFIVRTAWVYGEYGHNFVYTMLNLAKTHKQ 175 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++VV DQ G PT +A I + N + G + + D G SW DFA+ I Sbjct: 176 LTVVSDQIGRPTWTKTLADFITYLVDNKV------AYGTYQCSND-GICSWYDFAKEILK 228 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + P S +++YPT A+RP YS + LA WK+ + L++I Sbjct: 229 DKDVEVLPVS------SEEYPTVAYRPHYSVM---HLAKETGFEFPMWKDALHEFLLSI 278 >gi|580881|emb|CAA51629.1| ipa-73d [Bacillus subtilis subsp. subtilis str. 168] Length = 432 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 14/263 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ IN GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLINGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H+ ++ G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKLF--------SHPPGIYHV-SNSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL 263 + + + T++Y K RPAYS L Sbjct: 230 TAILSVTTEEYGNKTPRPAYSVL 252 >gi|300812677|ref|ZP_07093087.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496337|gb|EFK31449.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 324 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 112/325 (34%), Positives = 162/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGLADGSSVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D +F P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM----- 213 + +ML + K E+ VV DQ GTPT L +AR ++ ++IE T G +H Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 214 --TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 TA G G +SW DF + I+ + G +KV + TK+Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTKEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYL 314 >gi|260887633|ref|ZP_05898896.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|330837995|ref|YP_004412575.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|260862649|gb|EEX77149.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|329745759|gb|AEB99115.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] Length = 279 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/287 (37%), Positives = 147/287 (51%), Gaps = 19/287 (6%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ + + + +E R D L F + P II+ AA Sbjct: 1 MKVLVTGVSGQLGFDVMRELLARGIEAKGASRSDFSLTDFAAMRRFVEAHRPTAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEPE+ +NA G +A A IG +YISTDYVF G T D + P + Sbjct: 61 YTAVDKAEDEPELCREVNAAATGELAHLAKEIGAKFLYISTDYVFPG---TGEDFYEPED 117 Query: 120 ---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P N+YG+SKL GEE I+R +WV+ G NF+ +MLRL + E+SVV Sbjct: 118 EKAPCNVYGESKLLGEEAAREALEELFIVRISWVFGENGKNFIKTMLRLTETHEELSVVG 177 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT +AR + + T G++H T + G SWA+ A E+ Sbjct: 178 DQIGSPTYTRDLARLLADMIV-------TEKYGVYHATNE-GTCSWAELAA----EALRC 225 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G ++V I T++YPTKA RP S L L + R+ W++ V Sbjct: 226 AGKKTRVKAIKTEEYPTKAKRPKNSRLSKKCLDDAGFSRLPDWRDAV 272 >gi|317132492|ref|YP_004091806.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3] gi|315470471|gb|ADU27075.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3] Length = 283 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/284 (36%), Positives = 149/284 (52%), Gaps = 13/284 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+I +GQ+ S + ++ D+D+ P L+ PD ++N AA Sbjct: 1 MRMLIIAADGQLGTDAVSYFSKKYDVSAFKTADMDVTDPIRVNGAILAVKPDAVLNCAAM 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E + E A+ +NA GAG +A AA +G ++ISTDYVF G P E +P Sbjct: 61 TNVDGCESQAEQAYRVNAYGAGLVALAAARVGAHLVHISTDYVFAGDGSRPYVETDSPDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKL+GE V + N ILRTAW+Y G+NF+ +ML+LA E+ E+ VV DQ G Sbjct: 121 QNVYGASKLSGERHVQALCPNSAILRTAWLYGPHGNNFVKTMLKLA-EKGEVGVVTDQVG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS ++ R I + GIFH T + G VSW FA IF G Sbjct: 180 NPTSTFELIRMIDAVVA-------CKSTGIFHATCE-GVVSWNGFAREIF----RLAGVE 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 V + ++++ AHRPAYS L K+A R + W++ +R Sbjct: 228 VNVKDVTSEEFVRPAHRPAYSVLSKDKIAAVTGYRPADWQDALR 271 >gi|311070292|ref|YP_003975215.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus atrophaeus 1942] gi|310870809|gb|ADP34284.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus atrophaeus 1942] Length = 282 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGRELCRQLKQAGYEVIALTKSMMNIADHRSVRHSFRHYRPDIVVNTAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E E A+ IN GA A A+ IG +ISTDYVF+G +P E P Sbjct: 63 TSVDKCETELEKAYLINGIGAYYTALEAEGIGAAYFHISTDYVFNGKGTSPYKEDDTPEP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + I+RT+WVY G NF+ +ML+LA+ + E+ VV DQ G Sbjct: 123 STIYGKSKKLGEELIRLAGKGSTIIRTSWVYGSGGHNFVNTMLQLAETKDELRVVNDQIG 182 Query: 181 TPTSALQIARAIIQI-AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A A+I + H G++H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVITLFGHP---------PGMYHVS-NSGMCSWYEFAAAIMEES----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + TK+Y RPAYS L + N IR W++ +R+ L Sbjct: 229 DTTILPVSTKEYGNLTPRPAYSVLSHQAI-NERGIRPRHWRDALRDYL 275 >gi|328555486|gb|AEB25978.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208] Length = 282 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L + + E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRRLKREGYEVIALTKAMMNISDQQSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA + A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYTSLEAENTGARFIHISTDYVFSGKGTRPYQTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G+NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGNNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I L + G +H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVI----GLFDRPP----GTYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T++Y K RPAYS L + + + W+E +R+ L Sbjct: 230 AAVLPVTTEEYGNKTPRPAYSVLSLESIER-QGLGMRHWREALRDYL 275 >gi|308175508|ref|YP_003922213.1| spore coat polysaccharide synthesis protei SpsK [Bacillus amyloliquefaciens DSM 7] gi|307608372|emb|CBI44743.1| spore coat polysaccharide synthesis protei SpsK [Bacillus amyloliquefaciens DSM 7] gi|328913857|gb|AEB65453.1| spore coat polysaccharide synthesis protein SpsK [Bacillus amyloliquefaciens LL3] Length = 282 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/287 (35%), Positives = 151/287 (52%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L Q+ E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRRLKQEGYEVIALTKAMMNISDQQSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA + A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYTSLEAENTGARFIHISTDYVFSGKGTRPSHTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G+NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGNNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I L + G +H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVI----GLFDRPP----GTYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T++Y K RPAYS L + + + W++ +R+ L Sbjct: 230 ADVLPVTTEEYGNKTPRPAYSVLSLESIER-QGLGMRHWRDALRDYL 275 >gi|332519463|ref|ZP_08395930.1| dTDP-4-dehydrorhamnose reductase [Lacinutrix algicola 5H-3-7-4] gi|332045311|gb|EGI81504.1| dTDP-4-dehydrorhamnose reductase [Lacinutrix algicola 5H-3-7-4] Length = 285 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 156/287 (54%), Gaps = 13/287 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR---VGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G NGQ+AQ++ + ++ + I+ V + D++L F + + IN AAY Sbjct: 6 LVTGANGQLAQTIKELYQKNKDNIKFTFVAKSDLELTNHNQVDKLFSAQVFNYCINCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V++AED +AF++NAE +A + I+ISTDYVF+G + P E TNP Sbjct: 66 TNVEQAEDSKTLAFNVNAEAVKNLATICKANSTTLIHISTDYVFNGEKKQPYKETDNTNP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG SKL GE + + ++Y I+RT+W+YS FG NF ++ KE+ + + + G Sbjct: 126 LNNYGASKLKGEAYIPQFIDSYFIIRTSWLYSKFGKNFYKTISNKIKEQTNLKITTAETG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTS + +A AI + LI + + + G++H ++ G +W +FA+ E A G Y Sbjct: 186 TPTSCVDLANAI----YFLIASKNKNY-GLYHF-SNLGQATWYEFAK----EIALVMGHY 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + TKA RP +S LD SK++ I WKE + N+ Sbjct: 236 NLDKIQPVDFFKTKAKRPQFSVLDKSKISTILPQEIPHWKEALNNLF 282 >gi|226193872|ref|ZP_03789474.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pakistan 9] gi|225934177|gb|EEH30162.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pakistan 9] Length = 276 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 142/272 (52%), Gaps = 21/272 (7%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 +++ + R DL +P+ A PDV++N AAYTAVD AE + A IN E G + Sbjct: 3 QVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAYTAVDAAETDGAAANVINGEAVGVL 62 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A A +G ++ STDYVFDG +P E PT P+N YG SKL GE VA +++ Sbjct: 63 AAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCPVNAYGASKLLGELAVAETGGDWLT 122 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 RT WV++ G NFL +MLRLAKER E+ +V DQFG PT A IA AH L Sbjct: 123 FRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFGAPTWARSIADG---TAHALT---- 175 Query: 205 TSLR---------GIFHMTADGGPVSWADFAEYIF--WESAERGGPY--SKVYRIFTKQY 251 T++R G++HMT+ G SW FA+ I W +A P S++ I Y Sbjct: 176 TAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIASWRAAPGAAPLAVSRIVPIPASAY 234 Query: 252 PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P A RPA S L L I + W+ V Sbjct: 235 PVPAQRPANSVLSNKALKERFGIELPDWRYAV 266 >gi|260437568|ref|ZP_05791384.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio crossotus DSM 2876] gi|292810200|gb|EFF69405.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio crossotus DSM 2876] Length = 303 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/261 (38%), Positives = 144/261 (55%), Gaps = 15/261 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSI 91 +D+ + PD +I+ AA+TAVD AEDE + +INA+G IA+A Sbjct: 53 LDITDKESVDKVIGEVKPDAVIHCAAWTAVDLAEDEDKKDKVKAINADGTENIARACKKY 112 Query: 92 GIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +YISTDYVFDG TP + + PLN+YG +KL GE+ V+S + Y I+R AWV Sbjct: 113 DCKMMYISTDYVFDGQGETPWEPDCKDYKPLNVYGATKLMGEQAVSSILDKYFIVRIAWV 172 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + G NF+ +ML + K ++ VV DQ GTPT L +AR ++ ++IE T G Sbjct: 173 FGVNGKNFIKTMLNVGKTHPQVRVVSDQIGTPTYTLDLARLLV----DMIE---TERYGY 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLA 269 +H T +GG +SW DF IF ++ G +KV + T +Y +KA RP S LD SKL Sbjct: 226 YHATNEGGYISWYDFTCEIF----KQAGYDTKVVPVTTAEYGISKAARPFNSRLDKSKLV 281 Query: 270 NTHNIRISTWKEGVRNILVNI 290 + TW++ V L I Sbjct: 282 ENGFKPLPTWQDAVARYLKEI 302 >gi|167758135|ref|ZP_02430262.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704] gi|167664032|gb|EDS08162.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704] Length = 282 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 14/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K ++G++GQI +++ + +VE+ + ++D+ + + +F PDVIIN AA Sbjct: 2 IKIWIVGSSGQIGTAINEVLDPLEVEVFNTDKDELDITETDEVLNFGEINRPDVIINCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D E EPE+AF +NA GA ++ A +G + +STD VFDGLS+TP EF TN Sbjct: 62 VTDTDVCEREPELAFRVNALGARNLSIVARKVGAKMVQLSTDDVFDGLSKTPYSEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L A E R ++V DQF Sbjct: 122 PKTVYGRSKRAGENYVKEFTHKHFIIRSNWVYG-RGNNFVTKVLDAADEGRTLAVASDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR I+ + T+ G +H T G S +FA+ I S G Sbjct: 181 GSPTSAKDLARIILYLIP-------TNEYGTYHATCK-GVCSRYEFAQEILRFSGREGS- 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + T + + RPAY+ LD L + WK + + Sbjct: 232 ---LKAVPTSESDLSSERPAYAVLDNFILRIIDVYEMPEWKRSLEEYM 276 >gi|260881231|ref|ZP_05403950.2| dTDP-4-dehydrorhamnose reductase [Mitsuokella multacida DSM 20544] gi|260849345|gb|EEX69352.1| dTDP-4-dehydrorhamnose reductase [Mitsuokella multacida DSM 20544] Length = 335 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + + +E+ V D L K ++ P+ +I+ AA Sbjct: 45 MRVLVTGVTGQLGHDCVVELKDRGMEVRGVSSKDFPLTDAKAMRRVMAAYKPNCVIHCAA 104 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AED+ ++NAEG +AK +YISTDYVF G P + +P Sbjct: 105 YTAVDRAEDDEAACMAVNAEGTANLAKLCREFHAKMVYISTDYVFPGDGDAPYETDAPKG 164 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YGKSKL GEE + S Y I+R +WV+ I G NF+ +MLRL + +++VV DQ Sbjct: 165 PQNVYGKSKLMGEEAIQSILKRYFIVRISWVFGINGKNFIRTMLRLGESHAKLTVVDDQV 224 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT R + + ++I+ T G++H T +G SWA+ A +F ++ G P Sbjct: 225 GSPT----YTRDLSVLLADMIQ---TERYGVYHATNEGF-CSWAELAAEVFRQA---GMP 273 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + YPT+A RP S + + L + W++ V L+ + Sbjct: 274 V-EVTPVPSSAYPTRAVRPKNSRMSKNSLTEAGFALLPRWQDAVGRYLIEL 323 >gi|227824674|ref|ZP_03989506.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus sp. D21] gi|226905173|gb|EEH91091.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus sp. D21] Length = 309 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 36/307 (11%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEI-----------IRVGRP-------DIDLLKPKD 41 +K V G NGQ+ ++ + + +E IR G P +D+ K Sbjct: 4 LKVFVTGVNGQLGHDVMNELAGRHIEAVGCGTSPVYKGIRNGSPVEKMPYIQLDITKKDQ 63 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PD +I+ AA+TAVD AE+ IA ++N +G IA+ +G +YIS Sbjct: 64 VNEAMEKVHPDAVIHCAAWTAVDAAEEPENIAKVRAVNVDGTRFIAEVCKKLGAKMLYIS 123 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G TP D + +PLN+YG+SKL GE V+S + Y I+R AWV+ + G+NF Sbjct: 124 TDYVFNGKGTTPWDPDCKEYDPLNVYGQSKLDGEFTVSSLLDKYFIVRIAWVFGLNGNNF 183 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ K +E+ VV DQ G PT +A ++ + T G +H T +GG Sbjct: 184 VKTMLKVGKTHKELRVVNDQIGAPTYTFDLACLLVDMIQ-------TDNYGYYHATNEGG 236 Query: 219 PVSWADFAEYIFWESAERGGPYS-KVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRI 276 +SW +FA+ IF R YS KV + T++Y +KA RP S L+ KL ++ R+ Sbjct: 237 YISWNEFAKEIF-----RQASYSTKVIPVTTEEYGMSKARRPFNSRLETKKLQDSGFNRL 291 Query: 277 STWKEGV 283 +WK + Sbjct: 292 PSWKSAI 298 >gi|15615927|ref|NP_244231.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Bacillus halodurans C-125] gi|10175988|dbj|BAB07084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Bacillus halodurans C-125] Length = 283 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/265 (35%), Positives = 138/265 (52%), Gaps = 12/265 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G NGQ+ LS Q ++ + + ++++L + +PD II+ AA+TAV Sbjct: 5 LITGANGQVGMELSKQGKQHFQVTALTKQELNILDRNTVMNKIKGVNPDWIIHVAAFTAV 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+ EDE A+ +N GA +A+AA G IYISTDYVFDG +P + NPLN+ Sbjct: 65 DQCEDEQRKAYHVNGLGAANVARAARETGAKLIYISTDYVFDGNKNSPYETCDLPNPLNV 124 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SK GE V Y I RT+W+Y +G NF+ +MLRL ++ I VV DQ G PT Sbjct: 125 YGNSKWLGERLVQKYVKTCTIARTSWLYGHYGGNFVKTMLRLLRKGEPIEVVADQVGCPT 184 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 ++ L+E GI+H++ + G +W +FA I + G S + Sbjct: 185 ----YVNDLVYYLFALMEKPS----GIYHIS-NRGSCNWFEFARAI---AKNAGYDPSLI 232 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKL 268 TK + KA RP YS + +L Sbjct: 233 RATTTKAFAAKARRPKYSVMSHQQL 257 >gi|258517209|ref|YP_003193431.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] gi|257780914|gb|ACV64808.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] Length = 287 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 151/264 (57%), Gaps = 12/264 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G NG + + L + + + ++D+ + ++ P++IIN AAY Sbjct: 1 MNILLTGANGMLGKDLIEVLKDKYCLKLTDKNELDITDYIKCEDYIINEKPELIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDK E+E E+A+ +NA G +A + IP ++ISTDYVFDGL E +P Sbjct: 61 TLVDKCEEEKELAYKVNAIGPRNLAIIGNEHNIPILHISTDYVFDGLKGENYLENDIKSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IYG++K GE+ + + TN + I+RT+W++ G+NF+ +ML+LAK + ++VV DQFG Sbjct: 121 LSIYGETKSLGEDYIVALTNRFYIVRTSWLFGENGNNFIKTMLQLAKSKDRLTVVNDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A+AI + LIE + GI+H+T + G +W D+A YIF G Sbjct: 181 TPTYTKDLAKAIAK----LIE---KNCYGIYHIT-NSGYTNWCDYARYIF----SLTGCK 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLD 264 V I T+++ A RP +S L+ Sbjct: 229 VTVDPISTEEFNRPAPRPKFSVLE 252 >gi|291543268|emb|CBL16377.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. 18P13] Length = 286 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 104/295 (35%), Positives = 159/295 (53%), Gaps = 16/295 (5%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ ++ + + + + V ++D+ P+ + +PDV+I+ AA Sbjct: 1 MKALVTGVKGQLGFDVVNELKNRGHDAVGVDIEEMDITDPESVSRVIGEAAPDVVIHCAA 60 Query: 60 YTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFS 116 +TAVD AED IA ++NA G IA+ + +YISTDYVF+G P + Sbjct: 61 WTAVDAAEDPENIAKVRAVNAGGTRNIAQVCKKLDCKMMYISTDYVFNGQGTQPWQPDCR 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN+YG++KL GE VA Y I+R AWV+ GSNF+ +ML + K+ + VV Sbjct: 121 DYAPLNVYGQTKLEGELAVADTLEKYFIVRIAWVFGKNGSNFIKTMLNVGKKHDTVRVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT L +AR ++ +A ++ G +H T +GG +SW DF I+ ++ Sbjct: 181 DQIGTPTYTLDLARLLVDMA-------ESEKYGYYHATNEGGYISWYDFTCEIY----KQ 229 Query: 237 GGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V + T +Y +KA RP S LD SKLA + W++ ++ L I Sbjct: 230 AGYATRVVPVTTAEYGLSKAARPFNSRLDKSKLAENGFQPLPAWQDALQRYLKEI 284 >gi|222528113|ref|YP_002571995.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM 6725] gi|222454960|gb|ACM59222.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM 6725] Length = 281 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 12/278 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+ GQ+ + + +D+ S+ + P++II+ AAYT V Sbjct: 3 LITGSKGQLGSEFIKQFENKYNVKGIDIEQVDITDLDSTVSYISATKPNIIIHCAAYTNV 62 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E + + AF +NA G +A AA+ +G +YISTDYVFDG P +EF NP++I Sbjct: 63 DGCESDKDTAFKVNAIGTRNVAMAAEKVGAKLVYISTDYVFDGEKEKPYNEFDRPNPISI 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SKLAGEE V ++ + Y I+R AW+Y G+NF+ ++++LAKE+ EI VV DQ G PT Sbjct: 123 YGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKLAKEKGEIDVVNDQRGNPT 182 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 + +A+ +I NS+ G +H+T + G SW DFA ++ G KV Sbjct: 183 FTKDVVQAV-----EVIMNSEK--YGTYHVTNE-GITSWYDFA----YKIVSTFGIDCKV 230 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + ++ A RP S LD L ++ W+E Sbjct: 231 NPTTSDKFIRPAKRPKNSALDKMMLRLEFGYKMRHWEE 268 >gi|167748150|ref|ZP_02420277.1| hypothetical protein ANACAC_02894 [Anaerostipes caccae DSM 14662] gi|167652142|gb|EDR96271.1| hypothetical protein ANACAC_02894 [Anaerostipes caccae DSM 14662] Length = 281 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + E I V ++D+ + + D +I+ AA Sbjct: 1 MKILVTGAAGQLGHDVMDELKKRGHEGIGVDVQEMDITDAEKVRQVITAADVDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INA+G IA+ + + +YISTDYVFDG P D N Sbjct: 61 YTAVDAAEDNAELCRKINADGTEHIARVCRDLDLKMMYISTDYVFDGQGERPWDPDDERN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + I+R AWV+ + G NF+ +ML LAK ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEQNLDKFFIVRIAWVFGVNGKNFIKTMLNLAKNHDRLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR + ++IE T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLA----DMIE---TDKYGRYHATNE-GLCTWYEFACEIF----KQAGI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA RP S + KL R+ W++ + L I Sbjct: 229 EIEVAPVGSDEYPAKAKRPENSRMSKDKLTQNGFERLPAWQDALARYLKEI 279 >gi|300768304|ref|ZP_07078208.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494092|gb|EFK29256.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 288 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/284 (32%), Positives = 153/284 (53%), Gaps = 16/284 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + Q + + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQGMVFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + +L++ S G + ++ D +W DFA+ I ++ P Sbjct: 183 GRPT----WTRTLAEFMAHLVKTEAAS--GTYQLSND-NTATWYDFAKEILKDTDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + ++Q+P KA+RP +S ++ K A +I TW+E + Sbjct: 236 ------VTSEQFPQKAYRPQHSVMNLDK-AKATGYQILTWQEAL 272 >gi|300932855|ref|ZP_07148111.1| hypothetical protein CresD4_02236 [Corynebacterium resistens DSM 45100] Length = 293 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 155/297 (52%), Gaps = 29/297 (9%) Query: 1 MKCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS-----P 51 M +V+G+ GQ+ AQ L S + V R +DL FF SFS P Sbjct: 1 MTFVVLGSKGQVGSFLAQQLGSAA------LPVDRSQVDLSSRLSVEQFFSSFSTPTSRP 54 Query: 52 DVIINPAAYTAVDKAEDEPEIAFS--INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 +IN AA+TAVD+AE E F+ +NA G +A+ +GIP +++STDYVF G Sbjct: 55 AALINCAAFTAVDEAESETGEVFNNQVNAVAPGWVAQHCQRLGIPMVHVSTDYVFGGELP 114 Query: 110 TPID--EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLR 164 T + PTNP+N YG++K AGE V + ++RTAWVYS G +F +MLR Sbjct: 115 TGQEYHPHHPTNPVNAYGRAKAAGERAVIEAGGH--VVRTAWVYSGPEHPGKDFATTMLR 172 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LA++ + VV DQFG P+ A +A A+ ++A L N +L + H T G P +W + Sbjct: 173 LAQQGVDPKVVNDQFGRPSHAAVVASALKEVAEAL--NEGETLPCVLHATGSGQPTNWCE 230 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 FA IF S G +V I T +YPT A RPA S L + ++ W+E Sbjct: 231 FAREIFRVS---GHDPERVTPISTSEYPTPAQRPANSVLSLDEWERCGLPKLPAWRE 284 >gi|332703267|ref|ZP_08423355.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio africanus str. Walvis Bay] gi|332553416|gb|EGJ50460.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio africanus str. Walvis Bay] Length = 293 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 21/289 (7%) Query: 2 KCLVIGN-NGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V+G G + +SL ++ ++ +GR D+D+ + A + N A Sbjct: 5 KAVVLGGRTGLLGRSLVRALEAAGWAVVPLGRADVDIFDSQALAGVLDREECSALFNTVA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAEDEP+ A+ +N + + + A GI ++ STD+VFDG + TP +PTN Sbjct: 65 YTQVDKAEDEPQEAYRLNEKLPQLLGRLARPRGIRLVHYSTDFVFDGRADTPYAPDAPTN 124 Query: 120 PLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YGKSKLAGE + + + +I+RT+W++ +NF+ +L LA+ R + VV DQ Sbjct: 125 PLSVYGKSKLAGERALLNQDVPSLLIIRTSWLFGPGKNNFVQKILELARSRDTLGVVHDQ 184 Query: 179 FGTPTSALQIAR---AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 G+P+ +AR A++Q + G+ H+ A+ G SW + A E+ Sbjct: 185 VGSPSYTPDLARNSLALMQAGGS----------GVHHL-ANAGQASWCELAS----EAVN 229 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G +V I T QYPTKA RPAYS LD S+ I+ W + +R Sbjct: 230 AAGLQCRVTPITTDQYPTKAKRPAYSVLDISRFTGITGIKPRPWVQCLR 278 >gi|256420554|ref|YP_003121207.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] gi|256035462|gb|ACU59006.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] Length = 287 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 8/286 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ Q++ + + ++D+ + +FF +N AAYT Sbjct: 5 LITGANGQLGQAIKKVTADYPGFNFVYTDFNELDITSEEAVRNFFSQQEIHACVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF +N E +A ++ISTDYVF+G P E +P Sbjct: 65 AVDKAESDEEFAFKLNFEAVLNLATICAEYNTQLVHISTDYVFNGQQNVPYVETDDASPN 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +IYG SKL GE + ++LRT+W+YS FG+NF+ M L +E+ ++VV DQ GT Sbjct: 125 SIYGSSKLRGEGAAIGFNPATIVLRTSWLYSEFGANFVKRMRELMQEKESLNVVFDQTGT 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A+ +A+ ++ + + + G++H + + G SW DFA I E Sbjct: 185 PTYAVDLAKVVLTVLTK-VWDIPGEYGGVYHYSNE-GVTSWYDFAVAI----RELTNASC 238 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + +YPT A RPAYS L+ K+ T I+I W+E ++ + Sbjct: 239 TVAPITSDKYPTAAKRPAYSVLNKEKIKETFGIQIPHWRESLKECI 284 >gi|50083369|ref|YP_044879.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Acinetobacter sp. ADP1] gi|49529345|emb|CAG67057.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Acinetobacter sp. ADP1] Length = 302 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 151/300 (50%), Gaps = 15/300 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASF------FLSFSPDV 53 MK L++G NGQ+ L E+I + R D++ D +F +F PD+ Sbjct: 1 MKILILGKNGQVGWELQRSLQPLGEVIALDRYEDVEHGFSGDITNFEAIEKVIQTFQPDI 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AYTAVDKAE E E A +N +A+ +I I+ STDYVF+G Sbjct: 61 VLNATAYTAVDKAESEVEQADLVNHIAVKHLAEQCKAIDALLIHYSTDYVFNGQGTAAWQ 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T P N YGK+K GE + ++ LRT+WVY+ G NF+ +ML+LA+ + E+S Sbjct: 121 EDDTTEPQNAYGKTKRNGEIALEQSQVKFINLRTSWVYASRGHNFIKTMLKLAQSKDELS 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLI---ENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ DQ G PT A IA QI + L G +H+ A G SW +A YIF Sbjct: 181 IIDDQIGAPTGAALIADVTAQIVRYYALQPQLQQKHLLGHYHLAAQ-GETSWYAYANYIF 239 Query: 231 WESAERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + A+ G V I T YPT A RP S L+ KL + + W++GV +++ Sbjct: 240 -DVAKAHGLALQLKTVKPISTVDYPTPAVRPLNSRLNTQKLQQMFALHLPQWQQGVEHMI 298 >gi|315923822|ref|ZP_07920051.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622855|gb|EFV02807.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus ATCC 23263] Length = 298 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 34/306 (11%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRVG-----------RPDIDLLKPKDFASFFLS 48 M+ LV G GQ+ A ++ + + + + RP +D+ A Sbjct: 1 MRFLVTGVGGQLGADVMAELAARGFDAVGTDLAPANEAYDDYRP-LDITDEAAVARMIRE 59 Query: 49 FSPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +PDV+++ AA+TAVD AED I ++NA+G AIAKA + G IY+STDYVFDG Sbjct: 60 AAPDVVVHCAAWTAVDAAEDPENIPKVTAVNADGTRAIAKACAAKGCKLIYLSTDYVFDG 119 Query: 107 LSRTPIDEFSPTN----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 P + P N PLN+YG++KLAGE V + + + I+R AWV+ GSNF+ +M Sbjct: 120 KGSAP---WQPDNTDYAPLNVYGRTKLAGEAAVRALVDRHFIVRIAWVFGQNGSNFIKTM 176 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L + + + VV DQ GTPT +AR ++ +A +T G +H T +GG +SW Sbjct: 177 LAVGRTHDSVRVVNDQIGTPTYTADLARLLVDMA-------ETEKYGTYHATNEGGYISW 229 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 DFA+ I+ + G ++V + T +Y + A RP S LD SKL I + W++ Sbjct: 230 CDFAKEIY----RQAGYATEVIPVTTAEYGASAAARPFNSRLDKSKLIQNGFIPLPDWRD 285 Query: 282 GVRNIL 287 + L Sbjct: 286 ALSRYL 291 >gi|281354884|ref|ZP_06241378.1| dTDP-4-dehydrorhamnose reductase [Victivallis vadensis ATCC BAA-548] gi|281317764|gb|EFB01784.1| dTDP-4-dehydrorhamnose reductase [Victivallis vadensis ATCC BAA-548] Length = 282 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/282 (36%), Positives = 141/282 (50%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G G + ++L + E+I GR + D+ F PD +++ AA+ Sbjct: 1 MRILVTGGKGMLGRTLCRAWKKH-EVIAAGRAEADITDAAGFDRLVGELRPDAVVHCAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+ E E E A+ +NA G G +A A + I ISTDYVF G P EF P Sbjct: 60 TAVDRCETESEAAYRVNAAGTGNVAAACRRHEVRLIAISTDYVFGGELDRPCHEFDTPIP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-ERREISVVCDQF 179 +YG+SK AGEE + ++VI RT+W+Y G +F+ +M+ LA R E+ VV DQF Sbjct: 120 GTVYGRSKFAGEELIRQTCPDHVIARTSWLYGAGGPSFVHTMMALADGSRPELKVVADQF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A H I L G +H+T + G SW +FA IF G Sbjct: 180 GNPTGADALA------GHLAILLEHPELSGTWHLTCE-GEASWYEFACEIF----RLAGK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 KV T ++P A RPA S LD L H + W++ Sbjct: 229 KQKVTPCATAEFPRPARRPANSRLDKMMLRLHHLPPMPEWRQ 270 >gi|300361536|ref|ZP_07057713.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri JV-V03] gi|300354155|gb|EFJ70026.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri JV-V03] Length = 328 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ K Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAKA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VNKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDKNGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|326692664|ref|ZP_08229669.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc argentinum KCTC 3773] Length = 282 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + ++ + + ++D+ + F + PDV+ + AA Sbjct: 1 MKFLITGANGQLGQELQKLLTERALDFVALSSQELDITDRAAVFATFETVQPDVVFHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +NA G +A AA + + +STDYVFDG S T E P Sbjct: 61 YTKVDLAEDEGRDINWQVNANGTKNVADAAKLVQAKLVAVSTDYVFDGKSLTDYRETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA+ ++SVV DQ Sbjct: 121 NPQNAYGRAKLAGELGVIESGADVYIVRTSWVFGEFGNNFVYTMQRLAQTHPKLSVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT R + + +LI + T G +H++ D +W DFA I + Sbjct: 181 LGRPT----WTRTLAEFMLHLIAVNATF--GTYHLSND-DTATWFDFAREILKTTDVEVT 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + ++P KA+RP +S + K A I W+ + L ++ Sbjct: 234 P------VTSAEFPQKAYRPKHSVMSLDK-AKATGFDILNWRAALAQFLASL 278 >gi|290891006|ref|ZP_06554070.1| hypothetical protein AWRIB429_1460 [Oenococcus oeni AWRIB429] gi|290479405|gb|EFD88065.1| hypothetical protein AWRIB429_1460 [Oenococcus oeni AWRIB429] Length = 276 Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 99/284 (34%), Positives = 159/284 (55%), Gaps = 18/284 (6%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AAYT Sbjct: 1 MITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAAYTK 60 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PTNP Sbjct: 61 VDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPTNPK 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ G Sbjct: 121 NEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQVGR 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A I+ LI++ + G ++++ + G SW DFA+ I YS Sbjct: 181 PTWTKTLAEFILY----LIDHQ--AAYGTYNLS-NRGTASWYDFAKEIL-------NNYS 226 Query: 242 -KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 227 LEIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 269 >gi|325571036|ref|ZP_08146608.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus ATCC 12755] gi|325156121|gb|EGC68307.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus ATCC 12755] Length = 279 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 104/292 (35%), Positives = 157/292 (53%), Gaps = 21/292 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + ++D+ P VI + AAYTA Sbjct: 3 LITGGNGQLGSELRHLFDEKGIDYVSTDAKEMDITDETVTMEKVKEIHPSVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS---PT 118 VDKAE+E E+ IN G +A AA +IG +YISTDYVFDG + + E+ Sbjct: 63 VDKAEEEGKELDELINVNGTRNVALAAKAIGAKLVYISTDYVFDGEKQ--VGEYQVDDQV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KL GE V ++Y I+RT+WV+ +G NF+ +M RLAKE + ++VV DQ Sbjct: 121 NPQNEYGRTKLLGERAVQGILDDYYIIRTSWVFGRYGHNFVYTMQRLAKEHKTLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PT +A ++ + IE + GI+H++ D SW +FA I +S Sbjct: 181 YGRPTWTRTLAEFMLYV----IEKQAPT--GIYHLSNDNS-CSWHEFACEILKDSDVVVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P I + ++P KA RP YS ++ SK A I TW+E +R ++ +I Sbjct: 234 P------IPSSEFPQKAKRPQYSVMNLSK-AKELGFEIPTWQEALRMMVQDI 278 >gi|291527357|emb|CBK92943.1| dTDP-4-dehydrorhamnose reductase [Eubacterium rectale M104/1] Length = 313 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 101/252 (40%), Positives = 144/252 (57%), Gaps = 16/252 (6%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 PDV+++ AA+TAVD AED+ + A +INA+G IA A I +YISTDYVFD Sbjct: 67 ELKPDVVVHCAAWTAVDLAEDDDKKAKVHAINADGTQNIADACKKIDAKMVYISTDYVFD 126 Query: 106 GLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G TP + PLN+YG++KL GE VA+ Y I+R AWV+ + G NF+ +ML Sbjct: 127 GQGTTPWQPDCKDYAPLNVYGQTKLDGELAVANTLEKYFIVRIAWVFGVNGKNFIKTMLN 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + K +++VV DQ GTPT L ++R ++ ++IE T G +H T +GG +SW D Sbjct: 187 VGKTHDKLTVVSDQIGTPTYTLDLSRLLV----DMIE---TDKYGYYHATNEGGYISWYD 239 Query: 225 FAEYIFWESAERGG-PYSK----VYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIST 278 F + IF ++ E G YS+ V + T +Y +KA RP S LD SKL + T Sbjct: 240 FTKEIFKQAVELGHTEYSEDRLTVAPVTTAEYGVSKAARPFNSRLDKSKLVENGFNPLPT 299 Query: 279 WKEGVRNILVNI 290 W++ + L I Sbjct: 300 WQDALHRYLQEI 311 >gi|325261286|ref|ZP_08128024.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] gi|324032740|gb|EGB94017.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] Length = 295 Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 108/300 (36%), Positives = 156/300 (52%), Gaps = 17/300 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + V ++D+ S SPD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDCVNELTKRGHVAVGVDIEEMDITDAASVNSVVKETSPDAVIHCAA 60 Query: 60 YTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFS 116 +TAVD AEDE E +NA G +A + +Y+STDYVFDG P + + Sbjct: 61 WTAVDAAEDEENREKVRLVNAVGTQNLADVCRDLNCKMLYLSTDYVFDGQGTEPWQPDCT 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KLAGE V+ Y I+R AWV+ G NF+ +ML L K I VV Sbjct: 121 DYKPLSVYGETKLAGELAVSQTLEKYFIVRIAWVFGKNGKNFIKTMLNLGKTHDTIKVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT +A+ ++ ++IE T G +H T +GG +SW DF + IF ++ E Sbjct: 181 DQIGTPTYTYDLAKLLV----DMIE---TEKYGYYHATNEGGYISWYDFTKEIFRQACEM 233 Query: 237 G-GPYSK----VYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G YS+ + + T++Y +KA RP S LD SKL + TW++ VR L I Sbjct: 234 GRQEYSEERLNLIPVTTEEYGISKAKRPFNSRLDKSKLTENGFTLLPTWQDAVRRYLQEI 293 >gi|19550672|gb|AAL91484.1|AF479753_5 putative dTDP-4-keto-L-rhamnose reductase RmlD [Lactobacillus gasseri] Length = 333 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ K Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAKA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDSPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|116618515|ref|YP_818886.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097362|gb|ABJ62513.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 279 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 150/293 (51%), Gaps = 18/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ Q L + + ++ + +D+ S F PDV+++ AA Sbjct: 1 MKFLITGAKGQLGQELQKLLRERGLDFVAFDSKQLDITNSAAVLSAFEQAQPDVVLHAAA 60 Query: 60 YTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ E+ + +N +G +A AA + +STDYVFDG + E Sbjct: 61 YTKVDLAEDDGRELNWQVNVDGTKNVADAAKLYEAKLVAVSTDYVFDGTNEGEYLESDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA +++VV DQ Sbjct: 121 NPKNSYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLAATHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERG 237 G PT +A ++ + DT GI+H++ D G +W DFA I ++ Sbjct: 181 LGRPTWTRTLAEFMLHLV-------DTKAGYGIYHLSND-GTATWFDFAREILKDTDVEV 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + ++P KA+RP +S + K A ISTW+E + L I Sbjct: 233 AP------VTSAEFPQKAYRPKHSVMSLEK-ARATGFEISTWREALGEFLAGI 278 >gi|218530623|ref|YP_002421439.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218531918|ref|YP_002422734.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218522926|gb|ACK83511.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218524221|gb|ACK84806.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] Length = 296 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L ++ E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQALSWP--EGVRVHAPDRQSLDITDEAAVAAALDARTYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAESEVVAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVED 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + + + G FH DG +W DFA I SA RG Sbjct: 179 QHGCPTSAADLA-GALAAIALRLAGDEAAPTGTFHCVNDGA-TTWCDFARAIVAGSARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I + YPT A RP S L L + + + +W+ + +IL Sbjct: 237 GRSVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDIL 286 >gi|148241182|ref|YP_001226339.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RCC307] gi|147849492|emb|CAK26986.1| Putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RCC307] Length = 292 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 105/296 (35%), Positives = 148/296 (50%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + VE++ R ++DL P+ PD ++N AY Sbjct: 1 MKVLLTGCAGQLGQALVASAPDGVELLATSRAELDLADPEACCCIVEEQRPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++NA+ A A A G + +STD+VF+G P P P Sbjct: 61 TAVDQAEQEPALAEAVNAQAPAAFAAALKQTGGRLLQLSTDFVFNGAQGHPYGPKQPREP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL----AKERREISVVC 176 L +YG SK GE+ + +LRT+WVY G NF +MLRL AK + VV Sbjct: 121 LGVYGASKARGEQAALQHPQAR-LLRTSWVYGPVGKNFCRTMLRLHAAKAKAGEPLRVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PTS L +A+A + + +D + H + D G SW DFA I E A+ Sbjct: 180 DQVGCPTSTLTLAKACWRA---IGIGADPDGPRVLHWS-DAGAASWYDFAMAIG-ELAQA 234 Query: 237 GGPYSKVYR---IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + R I T YPT A RP+YS LDC+ + W++ + +L Sbjct: 235 HGLLRQAARVEPITTADYPTPATRPSYSLLDCTASRQALGLPAVHWRDALAEVLAR 290 >gi|306820758|ref|ZP_07454384.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551207|gb|EFM39172.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 286 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/288 (35%), Positives = 152/288 (52%), Gaps = 14/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + L + D ++ +D+ + PDVI N AA Sbjct: 1 MKYLITGANGQLGRELQKQLNKSDHDLFLYDVDTMDITDYNQVEKIVSNIRPDVIFNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD E++ E A+ INA GA +A ++ IG ++ STDYVF G P E N Sbjct: 61 HTNVDGCENDIENAYKINAIGAQNLAMISEEIGSKFVHFSTDYVFSGEDEIPRIESDFVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YGKSKL GEE V + + Y I+RTAW+Y G+NF+ +ML+L+K+ +++VV DQF Sbjct: 121 PKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGD-GNNFVRTMLKLSKQNDKLTVVGDQF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ I + S+T G++H T G SW DFA IF E Sbjct: 180 GSPTYTKDLAKVAIDL-------SNTKYYGLYHGTCQ-GSCSWFDFACKIF----EIMNI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV ++ ++Q+ A RP YS +D L W++ +++ L Sbjct: 228 NIKVEKVTSEQFVRPAKRPTYSVIDNFMLRLRGLDAFRHWEDSLKDYL 275 >gi|315650486|ref|ZP_07903556.1| dTDP-4-dehydrorhamnose reductase [Eubacterium saburreum DSM 3986] gi|315487282|gb|EFU77594.1| dTDP-4-dehydrorhamnose reductase [Eubacterium saburreum DSM 3986] Length = 286 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 150/295 (50%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----DVII 55 M+ LV G GQ+ L + +++E + + D+D+ + D II Sbjct: 1 MRVLVTGAKGQLGSDLLCELSKRNIESVGIDIEDLDITDAAATKKLIEDINNKTKLDAII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAVD AED + INAEG IA+ A ++ I +YISTDYVFDG + P + Sbjct: 61 HCAAYTAVDAAEDNEALVTKINAEGTKNIAEVAKTLDIAMMYISTDYVFDGEGKRPWEPD 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YG +K GE V Y I+R +WV+ + G+NF+ +MLRL KER +SVV Sbjct: 121 DKRAPLNVYGMAKYKGELYVEELVKKYFIVRISWVFGLHGNNFIKTMLRLGKERGAVSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT ++R + + T G +H T + G SW DFA IF + Sbjct: 181 NDQIGSPTYTPDLSRLLADMIV-------TDKYGRYHATNE-GLCSWYDFAVEIF----K 228 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + +P KA RP S +D SKL + TW++ + L+ + Sbjct: 229 QAKLDVAVTPVSSDAFPVKAKRPHNSRMDKSKLTENGFKLLPTWQDALGRYLLEL 283 >gi|237714663|ref|ZP_04545144.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262406528|ref|ZP_06083077.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|294645677|ref|ZP_06723364.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294806946|ref|ZP_06765769.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|229445432|gb|EEO51223.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262355231|gb|EEZ04322.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|292638956|gb|EFF57287.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294445833|gb|EFG14477.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 288 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 145/288 (50%), Gaps = 10/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNHYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAIVAKEADATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQGTGCRYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA+ E + G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAK----EICDLSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + ++P+K RP +S LD +K+ +T I + WK+ ++ + Sbjct: 232 VCDIQPCHSDEFPSKVKRPHFSVLDKTKVKSTFGITVPYWKDSLQKCI 279 >gi|295084058|emb|CBK65581.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 288 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 144/288 (50%), Gaps = 10/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNHYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAVVAKETDATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + +Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQETGCHYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA E + G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAR----EICDLSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + ++P+K RP +S LD +K+ T I + WK+ ++ + Sbjct: 232 VCNIQPCHSDEFPSKVKRPHFSVLDKTKVKFTFGITVPYWKDSLQKCI 279 >gi|260174675|ref|ZP_05761087.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|315922938|ref|ZP_07919178.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|313696813|gb|EFS33648.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 288 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 146/288 (50%), Gaps = 10/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNQYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAVVAKETDATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + +Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQEIGCHYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA+ E + G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAK----EICDLSGN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + ++P+K RP +S LD +K+ + I + WK+ ++ + Sbjct: 232 VCDIQPCHSDEFPSKVKRPHFSVLDKTKVKSAFGITVPYWKDSLQKCI 279 >gi|325662381|ref|ZP_08150990.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471383|gb|EGC74606.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium 4_1_37FAA] Length = 280 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + V ++D+ + +I+ AA Sbjct: 1 MKVLVTGTKGQLGYDVVNELEKRGHTAVAVDIEEMDITDAVSVERVITEAEVEAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NAEG IAK + + IYISTDYVFDG P + + Sbjct: 61 YTAVDAAEDNVEICRRVNAEGTENIAKVCKKLDLKMIYISTDYVFDGEGERPWEPDDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V Y Y I+R AWV+ + G NF+ +ML+L++ E++VV DQ Sbjct: 121 PLNVYGQTKYEGELAVEKYLEKYFIVRIAWVFGVNGKNFIKTMLKLSETHEELNVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++ + ++ G +H T + G +W +FA+ IF + G Sbjct: 181 GSPTYTYDLAVLLVDMV-------ESDKYGRYHATNE-GLCTWYEFAKEIF----RQAGV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +P KA RP S + KL R+ TW++ + L I Sbjct: 229 EVKVNPVTSDMFPAKAKRPKNSRMSKEKLDANVFHRLPTWQDALERYLSEI 279 >gi|21672279|gb|AAM74486.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Aeromonas hydrophila] Length = 300 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L++G GQ+ ++L S Q +V GR + D+ P + + PDVIIN Sbjct: 1 MKILLLGARGQLGRALFSALRQMFPHWQVDAPGREECDITIPDVLCGWIDACRPDVIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE E E+A N + +A+ A + G ++ STDYVFDG P E Sbjct: 61 AAYTAVDEAESEQELADMANHQALLCMAREASNAGALLVHFSTDYVFDGTGTKPWLETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YG SK AGE + +++I+RT W+Y G +F ++L A++ + ++VV D Sbjct: 121 PRPLNVYGMSKYAGELAIQRLCPHHLIIRTGWLYGGEGRHFARTILARARQGQALAVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +ARA + ++ + + + G++H+ G SW FA + E+ G Sbjct: 181 QWGAPTQVDWLARASVLALSQVLNSPNKA--GLYHLVCR-GETSWHGFASALVNEAFRLG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I + ++P +A RP S LDC ++ W+E +++ L ++ Sbjct: 238 MLKEQINVRAIHSDEWPQQARRPLNSRLDCHHFSDLFGTEQPHWQEQMKDWLFSL 292 >gi|88808163|ref|ZP_01123674.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7805] gi|88788202|gb|EAR19358.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7805] Length = 302 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 148/301 (49%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFA------SFFLSFSPDVI 54 MK L+ G GQ+ Q+L +E++ R + L D A PD + Sbjct: 1 MKVLLTGAAGQLGQALIDAAPAGMELLASSRNGGEGLLALDLADATSCRQAVAEHRPDWV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVDKAE EPE+A ++N A A+A G + +STD+VF+G +P Sbjct: 61 LNAGAYTAVDKAEAEPELAGAVNGAAPRAFAEAIREHGGRLLQLSTDFVFNGQQGSPYRV 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +PL +YG SK +GEE V + + ++LRT+WV G NF L+MLRL +++ Sbjct: 121 DQSRDPLGVYGASKASGEEAVEALLGASGQGLVLRTSWVIGPVGKNFALTMLRLHRDKEL 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G P+S L +A A Q + +L + H DGG SW D + + Sbjct: 181 LGVVADQVGCPSSTLNLASACWQAIQR--HSQGAALPPVLHWC-DGGAASWYDVSVAVGE 237 Query: 232 ESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G + V I T YPT A RP YS LDC ++ W+ ++++L Sbjct: 238 LGMELGLLECAATVNPITTADYPTPAKRPNYSLLDCQGSRQVLQLQAQPWRAALKDVLQA 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|291525902|emb|CBK91489.1| dTDP-4-dehydrorhamnose reductase [Eubacterium rectale DSM 17629] Length = 313 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 100/252 (39%), Positives = 144/252 (57%), Gaps = 16/252 (6%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 PDV+++ AA+TAVD AED+ + A +INA+G IA A I +YISTDYVFD Sbjct: 67 ELKPDVVVHCAAWTAVDLAEDDDKKAKVHAINADGTQNIADACKKIDAKMVYISTDYVFD 126 Query: 106 GLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G TP + PLN+YG++KL GE VA+ Y I+R AWV+ + G NF+ +ML Sbjct: 127 GQGTTPWQPDCKDYAPLNVYGQTKLDGELAVANTLEKYFIVRIAWVFGVNGKNFIKTMLN 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + K +++VV DQ GTPT L ++R ++ ++IE T G +H T +GG +SW D Sbjct: 187 VGKTHDKLTVVSDQIGTPTYTLDLSRLLV----DMIE---TDKYGYYHATNEGGYISWYD 239 Query: 225 FAEYIFWESAERGG-PYSK----VYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIST 278 F + IF ++ E G YS+ V + T +Y +KA RP S LD +KL + T Sbjct: 240 FTKEIFKQAVELGHTEYSEDRLTVAPVTTAEYGVSKAARPFNSRLDKNKLVENGFKPLPT 299 Query: 279 WKEGVRNILVNI 290 W++ + L I Sbjct: 300 WQDALHRYLQEI 311 >gi|331086196|ref|ZP_08335278.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406355|gb|EGG85869.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 224 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 138/231 (59%), Gaps = 11/231 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G NGQ+ ++L+ + D+++I D+D+ + + PD+IIN AA Sbjct: 3 KILITGCNGQLGRALNQFYAKHPDIQLINTDVEDLDIANANEVMEYVSKIHPDIIINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD E E+A+ IN +G ++ A++ +G ++IS+DYV+DG + P E Sbjct: 63 YTNVDDCEKNQELAYRINVDGPKNLSVASNEVGAVLVHISSDYVYDGRKKEPYLEEDDYA 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +K+ G+ V + Y I+RTAW+Y G NF L+ML+LA++R++I+VV DQ Sbjct: 123 PQSVYGMTKMKGDAYVTEIAHKYFIVRTAWLYG-EGKNFPLTMLKLAEKRKQIAVVMDQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 G+PTSA ++ + I +L+ SD G++H T +G SWA+FA+ F Sbjct: 182 GSPTSAYEVVKVI-----DLLCKSDQ--YGVYHATCEGS-CSWAEFAKNTF 224 >gi|218134415|ref|ZP_03463219.1| hypothetical protein BACPEC_02318 [Bacteroides pectinophilus ATCC 43243] gi|217989800|gb|EEC55811.1| hypothetical protein BACPEC_02318 [Bacteroides pectinophilus ATCC 43243] Length = 285 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/285 (35%), Positives = 154/285 (54%), Gaps = 13/285 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ L + + I R ++D+ + +PD +I+ AA Sbjct: 1 MKVLVTGADGQLGHDLVIELEKRGHTAIPTDRNEMDITDAEVVERVITDAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFSPT 118 YTAVDKAE++ E+ +INA+G IA + D +G +YISTDYVFDG P + + T Sbjct: 61 YTAVDKAEEDVEVCRNINAQGTRNIAASCDRLGCKMMYISTDYVFDGEGTRPWEPDDEVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG++K GE+ V + I+R AWV+ + G+NF+ +MLRL K+ + VV DQ Sbjct: 121 TPLNVYGETKYEGEQAVRELVEKFFIVRIAWVFGVNGNNFVKTMLRLGKQNGAVKVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT ++ + ++IE + G +H T + G SW +FA IF + G Sbjct: 181 IGSPTYTPDLSVLLC----DMIE---SDRYGTYHATNE-GLCSWYEFACEIFRAA---GM 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV + + ++P KA RP S L+ KL R+ W++ V Sbjct: 230 NDVKVTPVSSGEFPVKAKRPHNSRLNKDKLTANGFNRLPAWQDAV 274 >gi|326402833|ref|YP_004282914.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325049694|dbj|BAJ80032.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 149/289 (51%), Gaps = 3/289 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ +L++ R +GRP D P+ A + P +++N AA+TA Sbjct: 7 LITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + AF N +G +A S GIP I++STDYVFDG P E P PL Sbjct: 67 VDAAETSADAAFRANRDGPATLATLCRSRGIPLIHVSTDYVFDGTKGAPYTETDPIAPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK AGEE + + + +ILRTAW++S G NF +M+ A+ + VV DQ G P Sbjct: 127 VYGHSKAAGEEAILAAGADAIILRTAWIFSATGKNFARTMIAAARRLPALRVVADQRGAP 186 Query: 183 TSA-LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 187 TAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPHP 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL T + + WK+ I+ I Sbjct: 246 DIIPIATADWPTPARRPADSRLDTTKLNQTFALALPHWKDATARIVPAI 294 >gi|227431061|ref|ZP_03913121.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353181|gb|EEJ43347.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 154/289 (53%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q L + + + + +D+ + + F + PDV+++ AA Sbjct: 1 MKYLITGAHGQLGQELQKLLRERGLTFVAYDSKALDITNREVVMATFKAEQPDVVLHAAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE + + +N EG IA A G + +STDYVFDGL+ E P Sbjct: 61 YTKVDLAEDEGRAVNWQVNVEGTKNIADATKQYGAKLVAVSTDYVFDGLNVGEYRETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG+ KLAGE V I+RT+WV+ FG+NF+ +M RLA+ +++VV DQ Sbjct: 121 NPKNAYGRGKLAGELAVTESGAAAYIVRTSWVFGEFGNNFVYTMQRLAESHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + ++E + GI+H++ D +W DFA+ I ++ Sbjct: 181 LGRPTWTRTLAEFMLHLI--VVE----ATYGIYHVSND-ETATWFDFAKEILKDTTVVVE 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA+RP +S ++ K A + I +W+E + L Sbjct: 234 P------VTSAEFPQKAYRPKHSVMNLEK-AKSTGFEIPSWREALNKFL 275 >gi|104774640|ref|YP_619620.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423721|emb|CAI98712.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 324 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 162/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGIADGSAVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D +F P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM----- 213 + +ML + K E+ VV DQ GTPT L +AR ++ ++IE T G +H Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 214 --TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 TA G G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYL 314 >gi|170017544|ref|YP_001728463.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc citreum KM20] gi|169804401|gb|ACA83019.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc citreum KM20] Length = 279 Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L+ G NGQ+ Q L +C + D++ + +D+ + F PDV+ + AA Sbjct: 1 MTYLITGANGQLGQELQKLCNERDIDFVAFDSKQLDITDREAVFEAFARVQPDVVYHAAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ + + +N G +A AA + +STDYVF+G S T E Sbjct: 61 YTKVDLAEDDGRTVNWQVNVNGTKNVADAAHHYQAKLVAVSTDYVFEGTSETAYQETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA+ ++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLAESHPRLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT R + + LI+N + GI+H++ D +W DFA I + A Sbjct: 181 LGRPT----WTRTLAEFMLYLIDNQ--ANYGIYHLSND-DVATWFDFAREILKDHAVTVS 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + ++P KA+RP S + K A I TW+ + L +I Sbjct: 234 P------VTSAEFPQKAYRPKKSVMSLDK-AKATGFEIPTWRNALSMFLESI 278 >gi|318042940|ref|ZP_07974896.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CB0101] Length = 299 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 25/306 (8%) Query: 1 MKCLVIGNNGQIAQSL-----SSMCVQDVEIIRVGRPDID------LLKPKDFASFFLSF 49 MK ++ G GQ+ Q+L +++ + +E+I R + L + + Sbjct: 1 MKVILTGGAGQLGQALRRSASAAIGGRAMELITTTRSGGEGAIALDLADAAACRALVEEY 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD +IN AYTAVDKAE EPE+A ++NA+ GA+A+A S G + +STD+VF+G Sbjct: 61 QPDWVINAGAYTAVDKAESEPELAHAVNADAPGALAEALASTGGRLLQVSTDFVFNGAQG 120 Query: 110 TPIDEFSPTNPLNIYG--KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 +P P +PL +YG K+ A + +LRT+WVY G NFLL+MLRL Sbjct: 121 SPYRPDQPVDPLGVYGASKAAGEAAAVAALPADRLCLLRTSWVYGPVGKNFLLTMLRLMA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER ++ VV DQ G PT+ +A A + + H +D G SW DFA Sbjct: 181 ERDQLGVVADQVGCPTATAGLAGACWAVLQQGVCG--------MHHWSDAGAASWYDFAV 232 Query: 228 YIFWESAERGGPYS---KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I E + G + ++ I T YPT A RP+YS LDC+ + W+ ++ Sbjct: 233 AIA-ELGQDAGLLTNPARIQPITTADYPTPAQRPSYSLLDCTATREALQLPPLHWRAALQ 291 Query: 285 NILVNI 290 ++ ++ Sbjct: 292 RVISDV 297 >gi|313904864|ref|ZP_07838236.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cellulosolvens 6] gi|313470297|gb|EFR65627.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cellulosolvens 6] Length = 305 Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 99/261 (37%), Positives = 143/261 (54%), Gaps = 15/261 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSI 91 +D+ + A PD I++ AA+TAVD AEDE + +IN G +A+AA ++ Sbjct: 53 LDITDAEAVAKVIAEVKPDAIVHCAAWTAVDLAEDEDKQDKVKAINVSGTQHLAEAAKAV 112 Query: 92 GIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +YISTDYVF+G P D + PLN+YG+SKL GE VA + Y I+R AWV Sbjct: 113 DAKMVYISTDYVFNGQGTEPWDPDCRDYAPLNVYGQSKLGGELAVAETLDKYFIVRIAWV 172 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + G NF+ +ML + K E+ VV DQ GTPT L +AR ++ + +T G Sbjct: 173 FGLNGKNFIRTMLNVGKTHPEVRVVNDQIGTPTYTLDLARLLVDML-------ETEKYGY 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLA 269 +H T +GG +SW DF I+ + G +KV + T++Y +KA RP S LD SKLA Sbjct: 226 YHATNEGGYISWYDFTVEIY----RQAGLDTKVIPVTTEEYGLSKAARPFNSRLDRSKLA 281 Query: 270 NTHNIRISTWKEGVRNILVNI 290 + + WK+ + L I Sbjct: 282 ASGFKPLPDWKDALSRFLKEI 302 >gi|295792734|gb|ADG29297.1| putative dTDP-4-dehydrorhamnose reductase [Paenibacillus alvei] Length = 286 Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 98/285 (34%), Positives = 153/285 (53%), Gaps = 13/285 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ L + E++ + R +D+ K + PD I++ AA Sbjct: 1 MKILITGANGQLGMDVLRLFSKKGHEVVGLNRTQLDITDEKLCSDTITELKPDTILHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G IA AA+ + YISTDYVFDG + +P E+ TN Sbjct: 61 YTAVDNAEKDIDSAYLVNAIGTRNIAAAAERVKAKVCYISTDYVFDGTNTSPYYEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK AGE+ V + + I+RT+WVY G+NF+ +M++L KE + VV DQ+ Sbjct: 121 PLTVYGKSKRAGEQLVQFLCSRWFIVRTSWVYGATGTNFVNTMVKLGKECDCLQVVNDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + ++ + GI+H ++ G +W +FA+ IF E Sbjct: 181 GSPTYTWDLALFLEKLVA-------SEKYGIYH-ASNTGICTWYEFAQAIF----ELSNI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 V T+Q+ A RP YS ++ + + +W+E ++ Sbjct: 229 PVIVEPCTTEQFQRPATRPRYSAMESMAIRVNGFDPLRSWREALK 273 >gi|116514774|ref|YP_813680.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094089|gb|ABJ59242.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 324 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 162/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGIADGSAVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D +F P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM----- 213 + +ML + K E+ VV DQ GTPT L +AR ++ ++IE T G +H+ Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLV----DMIE---TDKYGYYHVTNAEL 233 Query: 214 --TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 TA G G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW V L Sbjct: 290 LDKSKLEKNGFKPLPTWPAAVHRYL 314 >gi|188581605|ref|YP_001925050.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] gi|179345103|gb|ACB80515.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] Length = 296 Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 109/290 (37%), Positives = 146/290 (50%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L + E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQAFPWP--EGVRVHAPDRQSLDITDEAAVAAALDARAYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE E A+ +NA +A IP I++STDYVFDG +P Sbjct: 59 AAYTAVDRAESEVAAAWRLNALAPAILAAETRRRAIPLIHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S +VI+RTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VNPKSVYGASKAAGEMAVRSANPRHVIVRTAWVVSPHRGNFVKTMLRLANERDRLTVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + + + G H DG +W DFA I +A RG Sbjct: 179 QHGCPTSAADLA-GALAAIALRLAGDEAAPTGTVHCVNDGA-TTWCDFARAIVAGAARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I T YPT A RPA S L L + I W+ + +IL Sbjct: 237 GRSVPVAGIPTAAYPTPARRPANSRLSTQSLTDAFGIAPRGWEAALDDIL 286 >gi|167757832|ref|ZP_02429959.1| hypothetical protein CLOSCI_00163 [Clostridium scindens ATCC 35704] gi|167664486|gb|EDS08616.1| hypothetical protein CLOSCI_00163 [Clostridium scindens ATCC 35704] Length = 313 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 164/321 (51%), Gaps = 41/321 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMC------------------VQD-VEIIRVGRPDIDLLKPKD 41 MK LV G GQ+ + + +QD ++ + +D+ Sbjct: 1 MKVLVTGVAGQLGHDVMNELAKRGYEGVGSDIKETYSGIQDGTAVVSMPYVQMDITDEDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDV+++ AA+TAVD AEDE EI ++NA G IA+ + +Y+S Sbjct: 61 VRKVLTDAAPDVVVHCAAWTAVDLAEDEDKKEIVHAVNATGTKNIAEVCKELDCKMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSPT----NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 TDYVFDG + + P PLN+YG++KLAGE V+ + Y I+R AWV+ G Sbjct: 121 TDYVFDGQG---TEAWQPDCKDYKPLNVYGETKLAGELAVSETLSKYFIVRIAWVFGKNG 177 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 NF+ +ML +AK +I+VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 178 KNFIKTMLNIAKTHDKITVVNDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATN 230 Query: 216 DGGPVSWADFAEYIFWESAERGG-PYSK----VYRIFTKQY-PTKAHRPAYSCLDCSKLA 269 +GG +SW DF + IF ++ E G YS+ V + T++Y +KA RP S LD SKL Sbjct: 231 EGGYISWYDFTKEIFRQAVELGHEEYSEDKVNVIPVTTQEYGASKAARPFNSRLDKSKLP 290 Query: 270 NTHNIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 291 ENGFTPLPTWQDALNRYLKEI 311 >gi|197119709|ref|YP_002140136.1| dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] gi|197089069|gb|ACH40340.1| dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] Length = 278 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 109/284 (38%), Positives = 149/284 (52%), Gaps = 14/284 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G+ G + Q L M V V DID+ L+ P ++IN AAYT V Sbjct: 3 LVVGSKGMLGQEL--MQVFGDAARGVDLDDIDITDLASVQRVLLTLKPRIVINAAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D + E E A +N EG +A IG + +STDY+FDG +P E +PL+I Sbjct: 61 DGCQAEVEKAMQVNGEGVAYLALTTKEIGAKLVQVSTDYIFDGKKGSPYVEDDLASPLSI 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE A + +++I+RT W+Y G NF+ +ML+LA ER E+SVV DQ G+PT Sbjct: 121 YGESKLAGEMN-AWFNPDHLIVRTQWLYGHGGKNFVETMLKLAGERSELSVVDDQTGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A AI + D G +H A+ G VSW FA+ IF + G KV Sbjct: 180 WAYDLALAIKALL-------DKGCGGTYH-AANAGFVSWNGFAKEIFRLA---GIADIKV 228 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T + A RP YS LDCSKLA + W++ + L Sbjct: 229 NPMSTAELNRPAPRPLYSTLDCSKLAQDTGFALQPWQQALERYL 272 >gi|303238694|ref|ZP_07325227.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] gi|302593813|gb|EFL63528.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] Length = 285 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 152/290 (52%), Gaps = 20/290 (6%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G+ GQ+ + L +I V +I++ + S SPD IIN AA Sbjct: 1 MKVIVTGSEGQLGKEVLRQFDKSCYDITAVDLKEINITNLDEVLSMVRRVSPDAIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL------SRTPID 113 YT VD E + + AF++NA G ++ A+ + ++ISTDYVFDG + P Sbjct: 61 YTNVDACEKDFDSAFAVNAIGPRNLSIASKEVNAKIVHISTDYVFDGAGVLKDNNIRPYM 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 EF T P YGK+KL GE V + + + I+RTAW+Y G NF+ +ML L+K + EI Sbjct: 121 EFDDTYPKTAYGKTKLEGENFVRLFNDKHFIIRTAWLYGE-GKNFVRTMLELSKAKDEIK 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPTS ++ R I LI DT G+FH T + G +W +F + IF Sbjct: 180 VVDDQRGTPTSTEELTRMI----RCLI---DTENYGLFHGTCE-GQCTWYEFTKEIFL-- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + G +KV T++YP+ RP YS L+ L T + W+E + Sbjct: 230 --KKGITTKVLSCSTEEYPSPTPRPKYSVLENYMLKRTSSYMFKEWQEAL 277 >gi|191638979|ref|YP_001988145.1| RmlD [Lactobacillus casei BL23] gi|190713281|emb|CAQ67287.1| RmlD [Lactobacillus casei BL23] gi|215272232|dbj|BAG84631.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei] gi|327383032|gb|AEA54508.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei LC2W] gi|327386219|gb|AEA57693.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei BD-II] Length = 281 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKL------AYGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S + +YP KA RP +S LD SK T +I TW++ ++ L Sbjct: 234 PVS------SAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFL 275 >gi|240138981|ref|YP_002963456.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] gi|240008953|gb|ACS40179.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] Length = 296 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/290 (36%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L ++ E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQALSWP--EGVRVHAPDRQSLDITDEAAVAAALDACTYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRL+ ER ++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLSGERDRLTVVED 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + + + G FH DG +W DFA I SA RG Sbjct: 179 QHGCPTSAADLA-GALAAIALRLAGDEAAPTGTFHCVNDGA-TTWCDFARAIVAGSARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I + YPT A RP S L L + + + +W+ + +IL Sbjct: 237 GRSVPIEGIPSSAYPTPARRPVNSRLSSQSLTDAYGLAPRSWEPALDDIL 286 >gi|225025806|ref|ZP_03714998.1| hypothetical protein EUBHAL_00031 [Eubacterium hallii DSM 3353] gi|224956890|gb|EEG38099.1| hypothetical protein EUBHAL_00031 [Eubacterium hallii DSM 3353] Length = 313 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/318 (33%), Positives = 158/318 (49%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQ---------------DVEIIRVGRPDIDLLKPKD 41 MK V G NGQ+ LSS + D + ++ +D+ + Sbjct: 1 MKFFVTGVNGQLGHDVMNELSSRSYEGIGSDIAPKYSGIQDDSPVTKMPYISLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PD++++ AA+TAVD AED + E INA G IA A + IY+S Sbjct: 61 VTRILKETAPDIVVHCAAWTAVDLAEDADKQETVRKINAAGTQYIASACKELDCKMIYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GE+ VA+ Y I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTTPWKPDCKDYKPLNVYGQTKLLGEQAVANTLEKYFIVRIAWVFGQNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K +++VV DQ GTPT +AR ++ +A ++ G +H T +GG Sbjct: 181 IKTMLTVGKNHDKLTVVNDQIGTPTYTFDLARLLVDMA-------ESEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGP-----YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ G + V+ + T +Y +KA RP S LD SKL Sbjct: 234 YISWYDFTKEIFRQAVALGHTEYDENHVTVFPVTTAEYGMSKAARPFNSRLDKSKLVEAG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + WK+ ++ L + Sbjct: 294 FTPLPDWKDALQRYLKEV 311 >gi|254561589|ref|YP_003068684.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] gi|254268867|emb|CAX24828.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] Length = 296 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/288 (35%), Positives = 147/288 (51%), Gaps = 3/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + + + R ++D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGLRVHAPNRQNLDITDEAAVAAALDARTYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAETEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA +A + + + + G FH DG +W DFA I SA RGG Sbjct: 181 GCPTSAADLA-GALAAIALRLAGDEAAPTGTFHCVNDGA-TTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + YPT A RP S L L + + + +W+ + +IL Sbjct: 239 SVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDIL 286 >gi|213023600|ref|ZP_03338047.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 216 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 128/218 (58%), Gaps = 8/218 (3%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L S V ++ + V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHM 213 DQ+G PT A +A AH + + + + G++H+ Sbjct: 181 DQYGAPTGAELLADC---TAHAIRVTLNKPEVAGLYHL 215 >gi|191638938|ref|YP_001988104.1| RmlD [Lactobacillus casei BL23] gi|190713240|emb|CAQ67246.1| RmlD [Lactobacillus casei BL23] gi|327382986|gb|AEA54462.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei LC2W] gi|327386174|gb|AEA57648.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei BD-II] Length = 280 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKL------AYGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S + +YP KA RP +S LD SK T +I TW++ ++ L Sbjct: 234 PVS------SAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFL 275 >gi|116495475|ref|YP_807209.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei ATCC 334] gi|116105625|gb|ABJ70767.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei ATCC 334] Length = 280 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDRKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKL------AYGIYHLSNDNS-CNWYEFASAILADKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S + +YP KA RP +S LD SK T +I TW++ ++ L Sbjct: 234 PVS------SAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFL 275 >gi|323486294|ref|ZP_08091620.1| hypothetical protein HMPREF9474_03371 [Clostridium symbiosum WAL-14163] gi|323693916|ref|ZP_08108103.1| dTDP-4-dehydrorhamnose reductase [Clostridium symbiosum WAL-14673] gi|323400404|gb|EGA92776.1| hypothetical protein HMPREF9474_03371 [Clostridium symbiosum WAL-14163] gi|323502013|gb|EGB17888.1| dTDP-4-dehydrorhamnose reductase [Clostridium symbiosum WAL-14673] Length = 286 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ ++ + + +E I V ++D+ PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGIEGIGVDVEEMDITDKDACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE E+ +NA+G IA+ + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEQNMELCRKVNADGTRNIAEVCRDLDISLMYISTDYVFNGTGERPWEPDDVRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++K GE + + Y I+R AWV+ + G NF+ +MLRL +E +SVV DQ Sbjct: 121 PLNAYGQAKYEGELAIEELLDKYFIVRIAWVFGVNGKNFIKTMLRLGREHGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFAVEIFKKAGMEDVK 232 Query: 240 YSKV-YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V +T +YP +A RP S + KL R+ +W++ + L I Sbjct: 233 VTPVDTEEYTSRYPGQAKRPMNSRISKDKLEENGFERLPSWQDALERYLKEI 284 >gi|295115902|emb|CBL36749.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SM4/1] Length = 281 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + E + V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVVNDLKKRGHEAVGVDVEEMDITDGQACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED ++ +NA+G IA + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNVDLCRRVNADGTRNIAAVCRDLDIKMMYISTDYVFNGQGLRPWEPDDERE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + I+R AWV+ + G NF+ +MLRL KE +SVV DQ Sbjct: 121 PLNVYGQTKCEGEMAVEELVKKFFIVRIAWVFGVNGKNFIKTMLRLGKENGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE+ G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLV----DMIESEKY---GRYHATNE-GLCSWYEFASEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + ++ KA RP S +D SKLA + W++ + L I Sbjct: 230 QVKVTPVTSDEFKAKAKRPMNSRMDKSKLAANGFEPLPAWQDALSRYLKEI 280 >gi|283798824|ref|ZP_06347977.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|291073511|gb|EFE10875.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|295092684|emb|CBK78791.1| dTDP-4-dehydrorhamnose reductase [Clostridium cf. saccharolyticum K10] Length = 281 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + E + V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVVNELKKRGHEAVGVDVEEMDITDGQACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED ++ +NA+G IA + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNVDLCRRVNADGTRNIAAVCRDLDIKMMYISTDYVFNGQGLRPWEPDDERE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + I+R AWV+ + G NF+ +MLRL KE +SVV DQ Sbjct: 121 PLNVYGQTKCEGEMAVEELVKKFFIVRIAWVFGVNGKNFIKTMLRLGKENGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE+ G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLV----DMIESEKY---GRYHATNE-GLCSWYEFASEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + ++ KA RP S +D SKLA + W++ + L I Sbjct: 230 QVKVTPVTSDEFKAKAKRPMNSRMDKSKLAANGFEPLPAWQDALSRYLKEI 280 >gi|120400391|gb|ABM21445.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 328 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 159/321 (49%), Gaps = 41/321 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTEAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 219 PVSWADFAE------YIFW-----ESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCS 266 P S D E YI W E + G +KV + T++Y +KA RP S LD S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQAGYKTKVTPVTTEEYGLSKAVRPFNSRLDKS 293 Query: 267 KLANTHNIRISTWKEGVRNIL 287 KL + TW + + L Sbjct: 294 KLEENGFKPLPTWPDAISRYL 314 >gi|189502420|ref|YP_001958137.1| hypothetical protein Aasi_1063 [Candidatus Amoebophilus asiaticus 5a2] gi|189497861|gb|ACE06408.1| hypothetical protein Aasi_1063 [Candidatus Amoebophilus asiaticus 5a2] Length = 290 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 7/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K L+ G GQ+AQ+L+ + + + +D+ + + + + +IN A Sbjct: 2 IKVLITGGQGQLAQALAHTQPKHQYLFATYQSKQALDITHIQQVKRYLQNNPINYLINCA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VD AE + + A++INA G +A A ++ISTDYVF+GL P+ E T Sbjct: 62 AYTQVDHAETDQKRAYTINAIAPGYLANLAQEFNFTLLHISTDYVFEGLLAKPLIEGMTT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+N YGK+KLAGE+ + Y I+RT+W++ + G NFL +L+ +++ + I +V DQ Sbjct: 122 NPVNYYGKTKLAGEQNILPYNIPAYIIRTSWLFDVLGDNFLTRLLKRSQQEKHIGMVYDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT +A + +I + EN GI+H A+ G S D A W + G Sbjct: 182 VSSPTYIQDLATTLWKIILQIHENPSLYQPGIYHY-ANEGVTSRYDLA----WTIHKIGN 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + +P A+RP+YS LD K+ +T + I W+E + L N Sbjct: 237 LNCNIIPKHSSDFPGFANRPSYSVLDKEKIKSTFGLTIPHWQESLAYCLHN 287 >gi|253699536|ref|YP_003020725.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251774386|gb|ACT16967.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 278 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/284 (38%), Positives = 147/284 (51%), Gaps = 14/284 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G+ G + Q L M V V DID+ L+ P ++IN AAYT V Sbjct: 3 LVVGSKGMLGQEL--MQVYGDAARGVDIDDIDITDLSSVQRVLLTLKPRIVINAAAYTDV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D + E E A +N EG +A IG + +STDY+FDG P E +PL+I Sbjct: 61 DGCQTEVEKAMQVNGEGVAFLALTTKEIGAKLVQVSTDYIFDGKKGAPYVEDDLASPLSI 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKLAGE A + +++I+RT W+Y G NF+ +ML+LA ER E+ VV DQ G+PT Sbjct: 121 YGESKLAGEMN-AWFNPDHLIVRTQWLYGHGGKNFVETMLKLAGERSELCVVDDQIGSPT 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A AI + D G +H A+ G VSW FA+ IF + G KV Sbjct: 180 WACDLALAIKALL-------DKGCGGTYH-AANAGFVSWNGFAQEIFRLA---GLADIKV 228 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T + A RP YS LDCSKLA + W++ + L Sbjct: 229 NPMSTAELNRPAPRPLYSTLDCSKLAQDTGFTLQPWQKALERYL 272 >gi|120400367|gb|ABM21422.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 328 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/321 (34%), Positives = 159/321 (49%), Gaps = 41/321 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 219 PVSWADFAE------YIFW-----ESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCS 266 P S D E YI W E + G +KV + T++Y +KA RP S LD S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQAGYKNKVTPVTTEEYGLSKAVRPFNSRLDKS 293 Query: 267 KLANTHNIRISTWKEGVRNIL 287 KL + TW + + L Sbjct: 294 KLEENGFKPLPTWPDAISRYL 314 >gi|46202362|ref|ZP_00053324.2| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 296 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 146/290 (50%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L + E +RV PD +D+ A+ S +INP Sbjct: 1 MDILILGGAGQVGTELQAYPWP--EGVRVHAPDRASLDITDEAAVAAALDERSYAAVINP 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + A+ +NA +A IP +++STDYVFDG + Sbjct: 59 AAYTAVDKAESDVAAAWRLNALAPAILAAETRKRNIPLVHVSTDYVFDGSGEGFYAPDAA 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YG SK AGE V + + ILRTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VKPTSVYGASKAAGEMAVRATNPRHAILRTAWVVSPHRGNFVKTMLRLAAERDRLTVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A A + + + + G FH DG +W FA I +A+RG Sbjct: 179 QHGCPTSAADLA-AALATIALRLARGEGAPTGTFHCVNDGA-TTWCGFARAILAGAAKRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I T YPT A RPA S L L + + I W+ + +IL Sbjct: 237 GRAIPVEGIPTSAYPTPAKRPANSRLSTQSLTDAYGIAPRPWEAALDDIL 286 >gi|294138869|ref|YP_003554847.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] gi|293325338|dbj|BAJ00069.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] Length = 288 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG +GQ+AQ+L + + + +GR D+D+ + D+IIN AAYT Sbjct: 6 RTLIIGKHGQLAQALIASKPRYINATAIGRDDVDIGSLDSILAAIEQTHADLIINTAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE ++AFS+N +GAG IA AA I++STDYVF+G ++ + Sbjct: 66 QVDMAESRRDLAFSVNRDGAGNIALAAKLTQTRLIHLSTDYVFNGQKNKAYCVDDESSAI 125 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SK AGE+ V A+ I+R++W+YS FGSNF+ +ML+L E+ E+SV+ DQ Sbjct: 126 NVYGTSKQAGEQAVIAANYEKACIVRSSWLYSQFGSNFVKTMLKLITEQPELSVINDQIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA ++ I ++ + +L I+H + D G SW +FA I + G Sbjct: 186 CPTSASELGLFIWNLSQ------EENLAPIYHWS-DAGTASWYEFALEIQGIALSLGKLD 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + I + Q+P+ A RP +S LD + A+ + W+E + +L Sbjct: 239 TRIPIKPISSSQFPSAASRPKFSLLDIT--ASRQIMTAKPWQENLAAVL 285 >gi|157694176|ref|YP_001488638.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus pumilus SAFR-032] gi|157682934|gb|ABV64078.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus pumilus SAFR-032] Length = 284 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 15/288 (5%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + LS + +D+ +I + R +++ + F P ++++ AA Sbjct: 1 MKVLITGAGGQLGKELSRQLKEKDITVIALTRSMLNIADQQAVRHAMRHFRPHIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+ E E E A+ +N GA A A +IG +++STDYVFDG + TP + + Sbjct: 61 YTSVDQCETETEKAYLVNGIGAYYTALEAKNIGADVLHVSTDYVFDGQADTPYKVDAQAD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYGKSK GEE + ++ I+RT+W+Y G NF+ ++LRLA+ + ++ +V DQ Sbjct: 121 PQTIYGKSKKLGEELIHLVSDEVKIIRTSWLYGHEGHNFVNTILRLAETKDQLRIVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A AII + GI+H++ + SW DFA I +S G Sbjct: 181 GSPTYTKDVAEAIIHLF--------DQQAGIYHVS-NRESCSWFDFASEIVAKS----GL 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I T++Y + RPAYS LD + T + WK+ + L Sbjct: 228 STTIEPISTEEYGFQTPRPAYSVLDLQAIEAT-GWQPRHWKDALHEYL 274 >gi|325685363|gb|EGD27470.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 324 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGLADGSSVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAV+ AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVELAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D +F P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM----- 213 + +ML + K E+ VV DQ GTPT L +AR ++ ++IE T G +H Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 214 --TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 TA G G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYL 314 >gi|163851817|ref|YP_001639860.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] gi|163663422|gb|ABY30789.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] Length = 296 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/290 (36%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L + E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQAFPWP--EGVRVHAPDRQSLDITDEAAVAAALDARAYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAEIEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVED 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + +++ G FH DG +W DFA I SA RG Sbjct: 179 QHGCPTSAADLA-GALAAIALRLAGDESAPTGTFHCVNDGA-TTWCDFARAIVAGSARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I + YPT A RP S L L + + + +W+ + +IL Sbjct: 237 GRSVPIEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDIL 286 >gi|116629770|ref|YP_814942.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri ATCC 33323] gi|282851771|ref|ZP_06261134.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri 224-1] gi|311110587|ref|ZP_07711984.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri MV-22] gi|116095352|gb|ABJ60504.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri ATCC 33323] gi|282557013|gb|EFB62612.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri 224-1] gi|311065741|gb|EFQ46081.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri MV-22] Length = 328 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 161/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDRVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE V++ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGQTKLGGEEAVSNTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|108805888|ref|YP_645825.1| dTDP-4-dehydrorhamnose reductase [Rubrobacter xylanophilus DSM 9941] gi|108767131|gb|ABG06013.1| dTDP-4-dehydrorhamnose reductase [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 155/288 (53%), Gaps = 19/288 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ LV G GQ+ + L+++ E++ +G ++D+ + SP+V+IN AA Sbjct: 3 LRVLVTGAGGQLGRELAALLPAAGHEVVALGHGELDVSDARAVGEALRRHSPEVVINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD E E +A+ +NA G +A+ + +G +++ST+YVFDG S P + + N Sbjct: 63 YTDVDGCESEAGLAYRVNALGPRNLAQLCERLGCELLHVSTNYVFDGRSERPYEPWDRPN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG +KLAGEE V T + I+RTA VY G NF+ +MLR A+ER + V D++ Sbjct: 123 PISVYGATKLAGEEYVRHLTGRWYIVRTAGVYG-EGRNFVRTMLRAARERSTLKVKDDEY 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT A +A II++ + L GI+H+T + G SW +FA IF G Sbjct: 182 ISPTYARDLAGGIIRVL-------EGRLYGIYHIT-NSGACSWCEFAREIF----RIAGV 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V + + YP A RP LA+ + W+E + + L Sbjct: 230 EAEVVPVPSSGYPLPAARPPNGV-----LASPEGPELRHWREALSDYL 272 >gi|194016228|ref|ZP_03054842.1| dTDP-4-dehydrorhamnose reductase [Bacillus pumilus ATCC 7061] gi|194011701|gb|EDW21269.1| dTDP-4-dehydrorhamnose reductase [Bacillus pumilus ATCC 7061] Length = 284 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 15/288 (5%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + LS + +D+ +I + R +++ + F P+++++ AA Sbjct: 1 MKVLITGAGGQLGKELSRQLKEKDITVIALTRSMLNIADQQAVRHAMRHFRPNIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+ E E E A+ +N GA A A +IG +++STDYVFDG + TP + + Sbjct: 61 YTSVDQCETETEKAYLVNGIGAYYTALEAKNIGADVLHVSTDYVFDGQADTPYQVDAQPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYGKSK GEE + ++ I+RT+W+Y G NF+ ++LRLA+ + + +V DQ Sbjct: 121 PHTIYGKSKKLGEELLHLVSDEVKIIRTSWLYGHEGHNFVNTILRLAETKDHLRIVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A AII + GI+H++ + SW DFA I +S G Sbjct: 181 GSPTYTKDVAEAIIHLF--------DQQAGIYHVS-NRESCSWFDFASEIVTKS----GL 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I T++Y + RPAYS LD + T + WK+ + L Sbjct: 228 STTIEPISTEEYGFQTPRPAYSVLDLQAIEAT-GWKPRHWKDALHEFL 274 >gi|297569787|ref|YP_003691131.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] gi|296925702|gb|ADH86512.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] Length = 298 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 105/292 (35%), Positives = 157/292 (53%), Gaps = 8/292 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDF-ASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ L ++ + R ++DL + A+ + P ++N AYTA Sbjct: 7 LLFGAEGQVGWELQRSLAVLGPVLALTRREVDLSDREAVRAAIRAAGRPAAVVNAGAYTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAEDE E A+++NA A+A A +IG+P ++ STDYV++G P E +P + Sbjct: 67 VDKAEDEAETAYAVNAAVPAAMAAEAKAIGVPLVHFSTDYVYNGDKAGPYLESDAPDPQS 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL G+ + + ++ILRT WVY+ G NFL +MLRLA ER ++ V+ DQ G P Sbjct: 127 VYGRSKLEGDAAIIASGVEHLILRTTWVYAARGGNFLRTMLRLAGERDQLRVIADQVGAP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY-- 240 TSA +A I A L+ G++H TA G SW +A +I E+A G P Sbjct: 187 TSAELLAD-ITAHALRLMLGGKAG-GGLYHCTA-AGETSWHGYARFIVAEAAALGRPLLV 243 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T+ YP A RP S LDC +L + + W+ V+ L + Sbjct: 244 KPEQIEPIPTEAYPLPAKRPKNSRLDCRRLEAAFGLVMPPWQFHVQRTLKEL 295 >gi|301067027|ref|YP_003789050.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei str. Zhang] gi|300439434|gb|ADK19200.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei str. Zhang] Length = 280 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 151/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKL------AYGIYHLSNDNS-CNWYEFASAILANKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S + +YP KA RP +S LD SK T +I TW++ ++ L Sbjct: 234 PVS------SAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFL 275 >gi|291550330|emb|CBL26592.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14] Length = 283 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G+NGQI ++L+ + ++E++ D+D+ ++ +F + PDVIIN Sbjct: 2 IKVWIAGSNGQIGRALNDILDPLEIEVLNTDLDDLDITNTEEVLNFGIVNRPDVIINCCG 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D E EPE A+ +NA GA ++ A G + +STD VFDG S+ P EF TN Sbjct: 62 VTDTDLCEKEPEHAYRVNALGARNLSIVARKNGAKIVQLSTDDVFDGQSKKPYTEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK AGE V +T+ + I+R+ WVY G+NF+ +L +A++ + +SV DQF Sbjct: 122 PLTVYGASKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVNRVLEVAEQGKTLSVAGDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR I+ + T+ G +H+T G + +FA+ I S G Sbjct: 182 GSPTSAKDLARMILYLIS-------TNEYGTYHVTC-SGVCNRYEFAQEILRLS----GK 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + T+Q + RP Y+ LD L + WKE + + Sbjct: 230 NVELKAVPTEQSDLSSVRPPYAVLDNFILRIIDMYDMPDWKESLEEYM 277 >gi|298375208|ref|ZP_06985165.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|301310779|ref|ZP_07216718.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|298267708|gb|EFI09364.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|300832353|gb|EFK62984.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 302 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 109/306 (35%), Positives = 148/306 (48%), Gaps = 23/306 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC-----------VQDVEIIRVGRPDIDLLKPKDFASFFLSF 49 M LV G NGQ+ + + V VE + G DI L+ + Sbjct: 1 MNILVTGANGQLGNEMRIIARESDDHYVFTDVNQVEGVETGFLDITDLEA--VRKMVAAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-S 108 DVI+N AAYT VD AE E+ +NAE +AK + ISTDYVF Sbjct: 59 RVDVIVNCAAYTNVDMAESNEELVEKLNAEAPENLAKVMKETNGFLVQISTDYVFGKEPC 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P E P +YG SKL GE+K+ + +VI+RTAW+YS FG NF +M+ L Sbjct: 119 NVPCQEDQQGTPTGVYGMSKLHGEQKIQAIGCKHVIIRTAWLYSEFGKNFCKTMMNLTAT 178 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENS---DTSLRGIFHMTADGGPVSWADF 225 + + VV DQ GTPT AL +A+AI + + + D GI+H + + G SW DF Sbjct: 179 KPHLKVVFDQVGTPTYALDLAKAIETVLKDYADKKNEHDYDKTGIYHYSNE-GVCSWFDF 237 Query: 226 AEYIFWESAERGGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + I AE G + V + ++P+ RP YS LD SK+ T IRI W E +R Sbjct: 238 TKSI----AEYNGTTACDVQPCHSDEFPSPVKRPFYSVLDKSKIKETFGIRIPYWTESLR 293 Query: 285 NILVNI 290 + NI Sbjct: 294 QCIANI 299 >gi|194466308|ref|ZP_03072295.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] gi|194453344|gb|EDX42241.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] Length = 279 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + + +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGIAYDAFDSKQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKRVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + L+++ G + ++ + SW +FA I + + P Sbjct: 183 GRPT----WTRTLAEFMTYLVDHDQPF--GTYQLSNENS-CSWYEFATEILKDKDVKVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + YP KA+RP +S + K NT I W+ + + Sbjct: 236 ------VDSSAYPAKAYRPRHSVMSLKKAENT-GFEIVDWQTALGEFM 276 >gi|42518977|ref|NP_964907.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii NCC 533] gi|41583264|gb|AAS08873.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii NCC 533] Length = 328 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 109/321 (33%), Positives = 158/321 (49%), Gaps = 41/321 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVKPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHEEVKVVSDQVGTPTYTFDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 219 PVSWADFAE------YIFW-----ESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCS 266 P S D E YI W E + G ++V + T++Y +KA RP S LD S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQAGYKTRVTPVTTEEYGLSKAVRPFNSRLDKS 293 Query: 267 KLANTHNIRISTWKEGVRNIL 287 KL + TW + + L Sbjct: 294 KLEENGFKPLPTWPDAISRYL 314 >gi|329929646|ref|ZP_08283343.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. HGF5] gi|328935972|gb|EGG32427.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. HGF5] Length = 294 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 167/293 (56%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q ++ + + E+I GR ++++ + PD II+ AA Sbjct: 1 MKVLITGAHGQLGQDIARIFNLAGHEVISCGREELNITDLDQCLQVSSTRRPDWIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE + + A+ +NA G +A AA+ I ++ISTDYVF G S P +E+ + Sbjct: 61 YAAVDAAETDVDGAYLVNAVGTRNMALAAEKIDAKIVFISTDYVFSGTSERPYNEYDSPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSKLAGE+ V + + + I+RT+W++ + G+NF+ +MLRL +E+ + VV DQ Sbjct: 121 PQSVYGKSKLAGEQMVQHFCSRWFIVRTSWLFGLHGNNFVKTMLRLGQEKPLLKVVNDQQ 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AH LI T GI+H ++ G +W +F IF E+ E+ G Sbjct: 181 GSPTYT-------VDLAHFLINLISTEKYGIYH-ASNSGSCTWYEFTSAIFEEAREQLGL 232 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ T+++P A RPA S +D + + W+EG++ ++++ Sbjct: 233 TITAELQPCTTEEFPRPAPRPANSVMDHLAIRLNQFEDLPHWREGLKQFMLDM 285 >gi|227543969|ref|ZP_03974018.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300909573|ref|ZP_07127034.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] gi|227186051|gb|EEI66122.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300893438|gb|EFK86797.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] Length = 279 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + V +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDKRGVAYDAFDSNQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA S+G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKSVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKAIQETLVDYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + L+++ G + ++ + SW +FA I + P Sbjct: 183 GRPT----WTRTLAEFMTYLVDHDQPF--GTYQLSNENS-CSWYEFATEILKDKDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + YP KA+RP +S + K +T I W+ + + Sbjct: 236 ------VDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVNWQTALNKFM 276 >gi|323340990|ref|ZP_08081239.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus ruminis ATCC 25644] gi|323091652|gb|EFZ34275.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus ruminis ATCC 25644] Length = 304 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/261 (37%), Positives = 143/261 (54%), Gaps = 15/261 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSI 91 +D+ K +PDV+++ AA+TAVD AED+ E+ +NA+G IA + Sbjct: 53 MDITDKKAVEKTITDLNPDVVVHCAAWTAVDMAEDDDKVELVRQVNAKGTENIALVCKKL 112 Query: 92 GIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +YISTDYVFDG P + + PLN+YG++KL GE V+ + Y I+R AWV Sbjct: 113 DCKMVYISTDYVFDGQGTKPWEPDCKDYKPLNVYGQTKLEGELAVSQNLDKYFIVRIAWV 172 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + G NF+ +ML + K + VV DQ GTPT +AR ++ ++IE T G Sbjct: 173 FGVNGKNFIKTMLNVGKTHDTLKVVSDQIGTPTYTYDLARLLV----DMIE---TDKYGY 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLA 269 +H T +GG +SW DFA IF ++ G +KV + T++Y +KA RP S LD SKL Sbjct: 226 YHATNEGGYISWYDFACEIF----KQAGYKTKVIPVTTEEYGLSKAARPFNSRLDKSKLK 281 Query: 270 NTHNIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 282 ENGFELLPTWQDALSRYLKEI 302 >gi|288870311|ref|ZP_06113670.2| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288867636|gb|EFC99934.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 284 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 150/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ + + + E I V ++D+ + +P+ +I+ AA Sbjct: 5 MRVFVTGVKGQLGHDVVDELEKRGHEAIGVDIDEMDITDAESVNRVIREAAPEAVIHCAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NA G IAK + I +YISTDYVF+G P + Sbjct: 65 YTAVDAAEDNLELCRRVNAYGTENIAKVCRELDIKMMYISTDYVFNGQGTRPWEPDDERE 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE + Y +R AWV+ + G NF+ +ML L K +I+VV DQ Sbjct: 125 PLNVYGLTKYEGELAIEENLTKYFTVRIAWVFGVNGRNFIKTMLNLGKTHDKITVVSDQI 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ ++IE T G +H T + G SW DFA+ IF ++ G Sbjct: 185 GSPTYTYDLARLLV----DMIE---TDRYGRYHATNE-GLCSWCDFAKEIF----KQAGM 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP++A RP S + KL R+ +W++ + L I Sbjct: 233 KVEVVPVTSEEYPSRAKRPMNSRMSKDKLEANGFERLPSWQDALGRYLKEI 283 >gi|313124555|ref|YP_004034814.1| dtdp-4-keto-l-rhamnose reductase rmld [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281118|gb|ADQ61837.1| Putative dTDP-4-keto-L-rhamnose reductase RmlD [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 324 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/325 (34%), Positives = 160/325 (49%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYKGIADGSAITTAPYVSLDITDAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N G IA A + +P +YIS Sbjct: 61 VEKVIKDVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTNGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D +F P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM----- 213 + +ML + K E+ VV DQ GTPT L +AR ++ ++IE T G +H Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 214 --TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 TA G G +SW DF + I+ + G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYL 314 >gi|291561388|emb|CBL40187.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SS3/4] Length = 282 Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 146/292 (50%), Gaps = 14/292 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + M + + I V ++D+ + + + +I+ AA Sbjct: 1 MRVLVTGVKGQLGHDVVNEMEKRGLTPIGVDLAEMDITDKEACDRVITEANVEAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NA G IA+ +GI +YISTDYVFDG P + + Sbjct: 61 YTAVDAAEDNIEVCRKVNAGGTRNIAEVCKKLGIKMMYISTDYVFDGQGTRPWEPDDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG+SK GE V + +R AWV+ + G NF+ +MLR+ KER SVV DQ Sbjct: 121 PLNVYGQSKYEGELAVEELVEKFFTVRIAWVFGVNGKNFIKTMLRIGKERGAASVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIF----RVAGM 228 Query: 240 YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP S + KL R+ WK+ V L I Sbjct: 229 DVKVTPVHSDEYPAAKAKRPMNSRMSKEKLTENGFERLPEWKDAVARYLKEI 280 >gi|322516351|ref|ZP_08069276.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis ATCC 49124] gi|322125084|gb|EFX96477.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis ATCC 49124] Length = 283 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 149/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +NY I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ +R Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALREF 277 >gi|288803655|ref|ZP_06409085.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica D18] gi|302345640|ref|YP_003813993.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica ATCC 25845] gi|288333895|gb|EFC72340.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica D18] gi|302149502|gb|ADK95764.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica ATCC 25845] Length = 294 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 149/293 (50%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-----IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + Q + + G +D+ +D + II Sbjct: 1 MNILVTGANGQLGNEIQLVSKQSKDHYIFTDVCEGYTKLDITNLEDIRKMVQDNKIECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI +NA +AKA +G +++STDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGEIVELLNATAPENLAKAMKEVGGLLVHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + N++ILRTAW+YS FG NF+ +M+ L + ++ V Sbjct: 121 DMKGTPTGVYGLTKLHGEEKIQATGVNHIILRTAWLYSEFGHNFVKTMMNLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N ++ GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLADAIFDIVENRKYEGNS---GIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + Sbjct: 234 LAGNTACDIQPCHSDEFPSPVTRPAYSVLDKTKIKETFGIKIPYWVDSLKKCM 286 >gi|149369375|ref|ZP_01889227.1| dTDP-4-dehydrorhamnose reductase [unidentified eubacterium SCB49] gi|149356802|gb|EDM45357.1| dTDP-4-dehydrorhamnose reductase [unidentified eubacterium SCB49] Length = 260 Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 144/259 (55%), Gaps = 12/259 (4%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+A+ L ++ +D ++ + R +D+ F S + D IN AA Sbjct: 3 KILVTGANGQLAKCLIDAAPKSEDYKVDYLSRAALDITDEVSVLEHFSSNTYDYCINTAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+KAE E AF +NA +A A + I+ISTDYVFDG T +E TN Sbjct: 63 YTNVEKAESEQTQAFLVNAASVQFLANACKNQATTLIHISTDYVFDGTKSTAYEETDATN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKL GE ++ Y ILRT+W+YS +G NFL ++L+ +++++ +Q Sbjct: 123 PINVYGASKLKGELLLSQTMEQYFILRTSWLYSQYGHNFLNTILKHLAAGKDLTITTEQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A+ I QI +I S+T G++H ++ G +W DFA I S Sbjct: 183 GTPTNANDLAQCIWQI---II--SETKAYGLYHY-SNNGEATWFDFASEILKVSPLLSN- 235 Query: 240 YSKVYRIFTKQYPTKAHRP 258 SK+ + T YPT A RP Sbjct: 236 -SKLAK--TDHYPTFAKRP 251 >gi|258591062|emb|CBE67357.1| Spore coat polysaccharide biosynthesis protein spsK [NC10 bacterium 'Dutch sediment'] Length = 288 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 149/293 (50%), Gaps = 18/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+IG NGQ+ L D +++ + + +L +SP +I+N AAY Sbjct: 1 MTTLLIGANGQLGSELRQ-AFSDGDLVPLTHAEFELADRTQVWDMLRKYSPHLILNTAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+ ED PE AF++NA +A A IG ++ STDYVFDG RTP E P Sbjct: 60 HRVDECEDFPERAFAVNAIAVRNLAIATKEIGATLVHFSTDYVFDGRMRTPYREADQPRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-----SNFLLSMLRLAKERREISVV 175 L++Y SK AGE V + Y ++RT +Y + G NF+ +MLRLA R+I VV Sbjct: 120 LSVYATSKRAGEYFVQAILERYYLIRTCGLYGVAGRCNKTGNFVETMLRLAAAGRKIDVV 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ TPTSA ++A + ++ +T G++H+T + G SW FA +F E Sbjct: 180 GDQIVTPTSAKELAHKVRRLV-------ETDAYGLYHIT-NNGECSWYQFAGAVF----E 227 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G + ++ + + +A RPAYS L+ + L + + W++ + L Sbjct: 228 LSGVQAHLHETTSAAFGARAVRPAYSVLENANLRSLGLDDLRHWRDALSEYLT 280 >gi|158522536|ref|YP_001530406.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3] gi|158511362|gb|ABW68329.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3] Length = 298 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 148/291 (50%), Gaps = 16/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + +I+ V ++D+ P PD+I+N AA+ Sbjct: 1 MKLLLCGANGQLGKDCMRHFAHGWDIVPVDVDELDITDPAAVQDMVGDHRPDLILNCAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPT 118 TAVD E E + AF+ NA G +A+AA G ++ISTDYVFDG P E P Sbjct: 61 TAVDACETEQDTAFAANAGGPENLAQAAQKRGCRLVHISTDYVFDGERPVPEAYIETDPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER--REISVVC 176 +P+++YG+SKLAGE+ V + ++RTAW+Y + G NFL +ML LA + I+VV Sbjct: 121 DPVSVYGRSKLAGEQAVLETGSANTVVRTAWLYGMGGKNFLKTMLGLALKNPCTPITVVA 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT + +A + IA + GI+H T G SW D A Y +R Sbjct: 181 DQFGCPTWSDTLALQLKVIA-------EKGGGGIYHATGQGY-CSWHDLAAYFL----KR 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T YPT A RP + L +L + + + W++ V + + Sbjct: 229 MDVLHAISPCTTADYPTPARRPKNAILKNRRLETENLLVMRNWQDDVDDFV 279 >gi|329667486|gb|AEB93434.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii DPC 6026] Length = 328 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 109/321 (33%), Positives = 158/321 (49%), Gaps = 41/321 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWKPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHEEVKVVSDQVGTPTYTFDLARLLV----DMIE---TDKYGYYHATNAEL 233 Query: 219 PVSWADFAE------YIFW-----ESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCS 266 P S D E YI W E + G ++V + T++Y +KA RP S LD S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQAGYKTRVTPVTTEEYGLSKAVRPFNSRLDKS 293 Query: 267 KLANTHNIRISTWKEGVRNIL 287 KL + TW + + L Sbjct: 294 KLEENGFKPLPTWPDAISRYL 314 >gi|315657295|ref|ZP_07910177.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491767|gb|EFU81376.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 287 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 15/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVE--ADVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTCDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIV---RSLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S V + T +P A RPA+S L + + I W+E Sbjct: 229 KDPSMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEE 272 >gi|149178945|ref|ZP_01857522.1| dTDP-4-dehydrorhamnose reductase [Planctomyces maris DSM 8797] gi|148842219|gb|EDL56605.1| dTDP-4-dehydrorhamnose reductase [Planctomyces maris DSM 8797] Length = 292 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 19/290 (6%) Query: 5 VIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 VIG+ GQ+ L S+ + + I + P+ A PD+IIN AAY V Sbjct: 6 VIGSRGQLGHDLMESLTAAGHQTTGLTHQQISIEDPECIAGALGQSPPDLIINTAAYNKV 65 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF--DGLSRTPIDEFSPTNPL 121 D AE EPEIA++INA G +A+ I ++IS+D+V+ D +TP E P+ Sbjct: 66 DLAEKEPEIAYAINALGPRHLAQYCSEKSISLMHISSDFVYGLDTSRQTPFQEHEAPGPV 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLRLAKERREISVVCD 177 + YG SKLAGE V + + ++RT +Y + G NF+ +MLRL K+R E+S++ D Sbjct: 126 SAYGLSKLAGEYFVRALCPQHYVVRTCGLYGVAGKTGNGNFVETMLRLGKDRDELSIIND 185 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q TPT+ +A A+ + LIE T+ G++H T G +W +FA IF E Sbjct: 186 QHCTPTATRDLASALTR----LIE---TNQFGLYHATCQ-GQTTWYEFACTIF----ELA 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I T+QY A RP +S LDCS+L I WK +++ L Sbjct: 234 GISVNTHPITTEQYNAPADRPRFSVLDCSRLTAAIGDAIPDWKSSLKHYL 283 >gi|320529735|ref|ZP_08030813.1| dTDP-4-dehydrorhamnose reductase [Selenomonas artemidis F0399] gi|320137974|gb|EFW29878.1| dTDP-4-dehydrorhamnose reductase [Selenomonas artemidis F0399] Length = 285 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 107/292 (36%), Positives = 150/292 (51%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ ++ + E+ V L + + F PD I++ AA Sbjct: 1 MKILITGATGQLGSDCTTEFKARGHEVYGVSSHMFPLSDEQAMRAVLEEFEPDSILHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AEDEP++ +NA G +AK A G +YISTDYVF G TP + P Sbjct: 61 YTAVDAAEDEPDLCRLVNAAGTEIVAKLAAEYGCRLLYISTDYVFPGTGDTPYEADDPKG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGEE VA++ +Y I+R +WV+ G NF+ +ML LA + +S+V DQ Sbjct: 121 PKNVYGASKLAGEEAVAAHLTDYFIVRISWVFGTHGKNFVKTMLSLADTHKSLSIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A L+ + S R G++H T +G SWA+FA IF G Sbjct: 181 GSPTYTRDLA--------PLLADMSVSDRYGVYHATNEGF-CSWAEFAREIF----RAAG 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + ++ YPTKA RP S L L R+ W++ V L + Sbjct: 228 KDVAVTSVPSRAYPTKAARPKNSRLSKKSLDAAGFRRLPPWQDAVARFLAEL 279 >gi|154247473|ref|YP_001418431.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] gi|154161558|gb|ABS68774.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] Length = 299 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 152/287 (52%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ + ++++ + ++ + +G +D+ P A + PD +IN AAY Sbjct: 3 RILLFGAGGQLGREVTALAAERGLDTVGLGHDALDIADPVAVARAIEAARPDALINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A INA G IA+ P I++STDYVFDG E P P Sbjct: 63 TAVDKAETEQKMAARINAFAPGLIAERCARYRTPLIHVSTDYVFDGTKAGAYVEADPIAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++K AGE V + + +VI+RT+WVY G+NFL +MLRLA ER + VV DQ G Sbjct: 123 LGVYGRTKAAGEAAVRAASERHVIVRTSWVYGAHGNNFLKTMLRLAAERDLLKVVSDQRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+ +A A++ + G +H A G +W FA I +A G Sbjct: 183 CPTATRDLAEAVLAA--AQAAARGDARWGTYHF-AGTGATTWHGFASAIVAAAAVHTGKT 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T +YPT A RP S L T +R + W++ V ++ Sbjct: 240 PEVAPITTAEYPTPAQRPKNSELASDLFERTFGVRAAPWEQRVGEVV 286 >gi|126178138|ref|YP_001046103.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1] gi|125860932|gb|ABN56121.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1] Length = 270 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/288 (34%), Positives = 148/288 (51%), Gaps = 31/288 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K ++ G G + L + V ++R ++D+ + + SPD+++N AAY Sbjct: 6 IKTVIFGAYGMLGHDLQT--VYPGAVLR--GHELDITDERAVGACIRDLSPDLVVNAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD ED ++AF++N E IA A G ++ STDYVFDG R I+ +P P Sbjct: 62 TDVDGCEDNRDLAFAVNGEALAYIASACSDAGATLVHYSTDYVFDGSKREYIESDTPA-P 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SKL GE+ + T +Y I+RT+W++ G NF+ +ML L+K+ ++ VV DQ G Sbjct: 121 INVYGASKLLGEQNIVKNTGDYRIIRTSWLFGRHGKNFVETMLHLSKQMDQVRVVNDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + +AR +I L GI+H+T D G SW DFA I Sbjct: 181 KPTYTVDLARKTPEI---------VGLEPGIYHVTND-GVCSWYDFARAII--------- 221 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + ++P KA RPAYS LANT + W + + + L Sbjct: 222 -ENVVPCSSAEFPRKAKRPAYSV-----LANTKTAPLRHWSDALADYL 263 >gi|304390039|ref|ZP_07371993.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326521|gb|EFL93765.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 287 Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 15/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVE--ADVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIV---RSLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S V + T +P A RPA+S L + + I W+E Sbjct: 229 KDPSMVAPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEE 272 >gi|218280964|ref|ZP_03487554.1| hypothetical protein EUBIFOR_00112 [Eubacterium biforme DSM 3989] gi|218217735|gb|EEC91273.1| hypothetical protein EUBIFOR_00112 [Eubacterium biforme DSM 3989] Length = 304 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 140/247 (56%), Gaps = 15/247 (6%) Query: 48 SFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 S PDV+++ AA+TAVD AEDE E +IN G IA A I +YISTDYVFD Sbjct: 67 SVKPDVVVHCAAWTAVDLAEDEDKQEKVKAINVGGTQNIANACKEIDAKMVYISTDYVFD 126 Query: 106 GLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G P + PLN+YG++KL GE V++ + Y I+R AWV+ G+NF+ +ML Sbjct: 127 GQGTEPWQPDCKDYKPLNVYGETKLGGELAVSNTLSKYFIVRIAWVFGKNGNNFIKTMLN 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + K+ + VV DQ GTPT +AR ++ ++IE T G +H T +GG +SW D Sbjct: 187 VGKKFDTLKVVNDQIGTPTYTYDLARLLV----DMIE---TDKYGYYHATNEGGYISWYD 239 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 FA IF ++ G +KV + TK+Y +KA RP S LD SKL + TW++ + Sbjct: 240 FACEIF----KQAGYTNKVIPVTTKEYGLSKAARPFNSRLDKSKLVENGFKPLPTWQDAL 295 Query: 284 RNILVNI 290 + L I Sbjct: 296 KRYLQEI 302 >gi|227534053|ref|ZP_03964102.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188325|gb|EEI68392.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 280 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 148/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ L + + +E ++D+ ++ F PDVI + AA Sbjct: 1 MKILITGANGQLGTELRHLLDHRGLEYRATDAKELDITDADAVNAYVKDFQPDVIYHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + I +N +G +A AA +YISTDYVFDG S Sbjct: 61 YTAVDKAEDEGKAINQKVNVDGTKNLAVAAGENDATLVYISTDYVFDGDSDELYTVDHKP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE V Y + I+RT+WV+ +G NF+ +ML LAK ++VV DQ Sbjct: 121 APRNEYGRTKYEGELAVQKYAKKFYIIRTSWVFGEYGHNFVYTMLDLAKTHDTLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + +E GI+H++ D +W +FA I ++ Sbjct: 181 YGRPSWTKTLAEFMTFAIDQKLE------YGIYHLSEDNS-CNWYEFATEILKDTD---- 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +KV + + +YP KA RP +S LD SK T + TW+E + + I Sbjct: 230 --TKVLPVTSAEYPQKAWRPRHSILDLSKTKAT-GFELPTWQEALSEFMTEI 278 >gi|148544280|ref|YP_001271650.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri DSM 20016] gi|184153657|ref|YP_001841998.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri JCM 1112] gi|227364999|ref|ZP_03849039.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM2-3] gi|325681689|ref|ZP_08161209.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM4-1A] gi|148531314|gb|ABQ83313.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri DSM 20016] gi|183225001|dbj|BAG25518.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri JCM 1112] gi|227069969|gb|EEI08352.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM2-3] gi|324979001|gb|EGC15948.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM4-1A] Length = 281 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + V +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGVAYDAFDSNQMDITDQVVVNEKISALEPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKKVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + NY I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKVIQETLANYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + L++++ G + ++ + SW +FA I + P Sbjct: 183 GRPT----WTRTLAEFMTYLVDHNQPF--GTYQLSNENS-CSWYEFATEILKDKDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + YP KA+RP +S + K +T I W+ + + I Sbjct: 236 ------VDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVDWQTALGEFMGEI 279 >gi|300728241|ref|ZP_07061609.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] gi|299774476|gb|EFI71100.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] Length = 299 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 18/301 (5%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQD-------VEIIRVGRPDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ + S QD + + V +D+ K +D Sbjct: 1 MNILVTGANGQLGNEIRLVSQQSTQDHYIFTDVIALEGVETTILDITKLEDVRKIVKEQD 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-R 109 IIN AA+T VDKAE +I ++NA +AKA + ++ISTDYVF G Sbjct: 61 VKCIINCAAWTNVDKAETAGDIVETLNATAPENLAKAMKEVDGELVHISTDYVFGGDPYN 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 TP E P +YG +KL GE+K+ + NY+I+RTAW+YS FG NF+ +ML L + Sbjct: 121 TPCKEDQKGTPTGVYGMTKLHGEQKIQASGVNYLIIRTAWLYSEFGHNFVKTMLNLTASK 180 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++ VV DQ GTPT A +A AI I N +T G++H + + G SW DF I Sbjct: 181 PQLKVVFDQTGTPTYAGDLATAIFDIIENRKYEGNT---GVYHYSNE-GVCSWYDFTVKI 236 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + + ++P+ RPAYS LD +K+ T I + W + ++ + N Sbjct: 237 ---AELAGNTNCDIQPCHSNEFPSPVTRPAYSVLDKTKIKETFGIHVPYWVDSLKTCMRN 293 Query: 290 I 290 + Sbjct: 294 M 294 >gi|298346201|ref|YP_003718888.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 43063] gi|298236262|gb|ADI67394.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 43063] Length = 287 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 102/284 (35%), Positives = 147/284 (51%), Gaps = 15/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSRGEDVRTYDRPEIDLTVQSSVKEHVVE--ADVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIV---RSLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S V + T +P A RPA+S L + + I W+E Sbjct: 229 KDPSMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEE 272 >gi|261367243|ref|ZP_05980126.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] gi|282570844|gb|EFB76379.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] Length = 300 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 35/310 (11%) Query: 1 MKCLVIGNNGQIAQSLSSM-----CV--------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L CV + +I V ++D+ + S+ Sbjct: 1 MKILITGCRGQLGTELQHQLAEEGCVLGPLPERLRKATVIPVDVDELDITDREATISYIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +IN AA+T V+ E + AF++NA G +A A D + I+ISTDYVF G Sbjct: 61 RHQPDTVINCAAFTNVNGCETSRDAAFTVNAIGPRNLALACDKVNARLIHISTDYVFSGA 120 Query: 108 SR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 +DE + P++ YG++KL GE+ V + ++I+RTAW+YS +G NF+ +M+ L Sbjct: 121 PNGGVALDECALPAPISAYGQTKLLGEQYVERFCRRHIIVRTAWLYSYYGKNFVKTMVNL 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWA 223 K +I+VV DQ G PT+A+ +A I+++A H+ GI+H T + G SWA Sbjct: 181 GKTHEKITVVNDQLGNPTNAVDLAYHILKLAVSHDY---------GIYHCTGN-GICSWA 230 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTW 279 DFA I + G KV + +Y P A+RP +S LD L T + W Sbjct: 231 DFAAEIM----KGAGLPCKVIPCTSAEYAAAHPESANRPEWSALDNRMLRCTVGDEMRDW 286 Query: 280 KEGVRNILVN 289 K+ +++ N Sbjct: 287 KDALKDFFAN 296 >gi|296111857|ref|YP_003622239.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc kimchii IMSNU 11154] gi|295833389|gb|ADG41270.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc kimchii IMSNU 11154] Length = 284 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + + + +D+ + F PDV+ + AA Sbjct: 1 MKFLITGANGQLGQELQKLLRERALGFVAFDSKQLDITNRVAVLAAFEKEQPDVVFHAAA 60 Query: 60 YTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE E+ + +N +G +A AA G + +STDYVFDG E Sbjct: 61 YTKVDLAEDEGRELNWQVNVDGTKNVADAAKQYGAKLVAVSTDYVFDGTKNNDYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA +++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMRRLAATHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT R + + +LI T G++H++ + G +W +FA I ++ Sbjct: 181 LGRPT----WTRTLAEFMLHLINVQATY--GVYHLS-NAGTTTWFEFAREILKDTDVEVT 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + ++P KA+RP +S + K A I W+E + L+ + Sbjct: 234 P------VTSAEFPQKAYRPRHSVMSLEK-AEATGFEILNWREALEAFLIGL 278 >gi|304314131|ref|YP_003849278.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter marburgensis str. Marburg] gi|302587590|gb|ADL57965.1| predicted dTDP-4-dehydrorhamnose reductase [Methanothermobacter marburgensis str. Marburg] Length = 284 Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 98/263 (37%), Positives = 143/263 (54%), Gaps = 14/263 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G +G + L + + E++ G D+D+ + PD II+ AA+ Sbjct: 1 MKVLVTGASGMLGSDLIDVLKERHEVLTSG--DLDIRDLEGVMELAAKKRPDTIIHAAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E E A+ +N G +A AA G +YISTDYVF+G EF +P Sbjct: 59 TDVDCAESERETAYQVNVLGTRNVAAAASQTGASLVYISTDYVFNGKKGEEYFEFDEPDP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YGK+K GE V T+ + I+RT+W++ G NF+ +M+ LA+ EISVV DQ+G Sbjct: 119 LNFYGKTKYLGELAVRDLTDKFYIVRTSWLFGRNGRNFVSTMVELAERGHEISVVDDQYG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A AI + LIE G++H+T + G SW DFA IF + + G Sbjct: 179 SPTYTRDLAGAIGK----LIER---PAYGVYHIT-NSGHCSWYDFAREIF-HALQMG--- 226 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL 263 K+ + + ++P A RP++S L Sbjct: 227 VKLKPVRSHEFPRPARRPSFSVL 249 >gi|253572899|ref|ZP_04850297.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|251837531|gb|EES65624.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 292 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 105/289 (36%), Positives = 151/289 (52%), Gaps = 19/289 (6%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLK--------PKDFASFFLSFS 50 M LV G NGQ+ Q++ S +Q+ I+ D+L+ S S Sbjct: 1 MNILVTGANGQLGQAIRAQSHRLQNHNIVFTDVISNDMLETILLDITSEDAVRSVCKSAQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 +VIIN AAYT V+KAE + E+A IN + +A A I I+ISTDYV+D Sbjct: 61 INVIINCAAYTDVEKAETDFEMANLINCDAVRNLATVAKECDITLIHISTDYVYDSRKAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E +P+N+Y +K AGE + +++ RTAW++S FGSNF+ +MLRL E+ Sbjct: 121 PYVETDEKHPINVYASTKYAGEVAIHEVGCKFILFRTAWMFSGFGSNFMKTMLRLTAEKE 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++VV DQ GTPT A ++ I ++ I+ + G ++ T +G VSW DFA I Sbjct: 181 TLNVVYDQVGTPTYAPELVSIIFKV----IDEDKLDMTGEYNFTNEGS-VSWYDFAVAIN 235 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + S G KV +++Y +K RP YS LD SK+ T I I W Sbjct: 236 YLS----GHNCKVNPCSSEEYGSKVIRPNYSVLDKSKVKKTFGITIPHW 280 >gi|114563926|ref|YP_751440.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] gi|114335219|gb|ABI72601.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] Length = 300 Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 23/301 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A++L + + E+I++ +D+ +P+ + PD+IIN AAY Sbjct: 1 MKILTFGQTGQLARALKRVQPKTAELIQLSHQQVDITQPQLIDEALAFYRPDIIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+KA+ P A INA +AKAA + GI I +STDYVFDG S TP + Sbjct: 61 TDVEKAQINPVAAMQINALAVEYMAKAASNYGIKLIQLSTDYVFDGRSSTPYSVTQKPST 120 Query: 121 LNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERRE-------- 171 +N YG+SKL EE + SY + + I+RT+W+Y G+NF+ +ML+L + Sbjct: 121 INAYGQSKLLAEETLLSYQSALFCIVRTSWLYHHSGNNFVTTMLKLMTQSHNQQTIGSSA 180 Query: 172 ---ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 I VV DQ G+PT AR + ++ S I+H + + G +W +FA+ Sbjct: 181 DNPIKVVNDQTGSPTMVDDFARFLWKLC------SQKQWSAIYHWS-NAGKCTWYEFAQE 233 Query: 229 IFWESAERGGPYSKVYR--IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 I + G +Y I ++QY + +RPA+S LD ++L++T I W++ + Sbjct: 234 IKTQGIALGLLPQSIYLQPITSEQYASIVNRPAFSVLD-TRLSHTLAIP-KPWQQQLAQC 291 Query: 287 L 287 L Sbjct: 292 L 292 >gi|315654784|ref|ZP_07907689.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 51333] gi|315490745|gb|EFU80365.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 51333] Length = 287 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/284 (35%), Positives = 147/284 (51%), Gaps = 15/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVE--ADVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIV---RSLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + V + T +P A RPA+S L + + I W+E Sbjct: 229 KDPAMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEE 272 >gi|153854429|ref|ZP_01995707.1| hypothetical protein DORLON_01702 [Dorea longicatena DSM 13814] gi|149752955|gb|EDM62886.1| hypothetical protein DORLON_01702 [Dorea longicatena DSM 13814] Length = 313 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 159/318 (50%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK LV G GQ+ + + D++ G D +D+ Sbjct: 1 MKVLVTGVGGQLGHDVMNELASRGYEGIGSDIKETYSGIQDGTAVTTMPYVPMDITDAAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDV+++ AA+TAVD AEDE +I ++NA G IA + +YIS Sbjct: 61 VEKVLTEAAPDVVVHCAAWTAVDLAEDEDKKDIVKAVNATGTKNIADVCKKLDCKMVYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG + + PLN+YG+SKLAGE V+ + Y I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTKAWEPDCKDYKPLNVYGESKLAGELAVSETLDKYFIVRIAWVFGKNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML +AK + VV DQ GTPT +AR ++ ++IE T G +H T +GG Sbjct: 181 IKTMLNVAKTHDTLKVVNDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-PYSK----VYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ G YS+ V + T++Y +KA RP S LD SKLA Sbjct: 234 YISWYDFTKEIFRQATALGHEEYSEEKVTVLPVTTEEYGVSKAARPFNSRLDKSKLAENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 FTPLPTWQDALGRYLKEI 311 >gi|194466816|ref|ZP_03072803.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] gi|194453852|gb|EDX42749.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] Length = 279 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + + +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGIAYDAFDSKQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTHNVAEAAKRVGAKMVYISTDYVFDGTNEGEYEINAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PQNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT R + + L+++ G + ++ + SW +FA I + P Sbjct: 183 GRPT----WTRTLAEFMTYLVDHDQPF--GTYQLSNENS-CSWYEFATEILKDKDVEVAP 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + YP KA+RP +S + K +T I W+ + + Sbjct: 236 ------VDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIIDWQTALNKFM 276 >gi|2258089|dbj|BAA21509.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans] Length = 284 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ K + FL P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLNERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G IAKA + +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQEALQ 275 >gi|283851960|ref|ZP_06369236.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] gi|283572684|gb|EFC20668.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] Length = 293 Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/281 (35%), Positives = 143/281 (50%), Gaps = 14/281 (4%) Query: 7 GNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + + L+ + +R R ++D + + FS + N AYTAVD Sbjct: 15 GKTGLLGRPLTQALAEAGFAVRPTTRTELDPFDTEAVSRALADFSATHLFNTVAYTAVDA 74 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AED+ E A+ +N + +A+A D+ ++ STD+VF G TP E PT P ++YG Sbjct: 75 AEDDTEAAYRLNRDLPAGLARACDAARAMLVHYSTDFVFRGDKATPYTEEDPTGPESVYG 134 Query: 126 KSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 SKLAGE+ + + Y ILRTAW++ NF+ ++L LA R E+ VV DQ G+PTS Sbjct: 135 ASKLAGEQAILETGLLRYQILRTAWLFGPGKKNFVATILGLAATREELRVVGDQIGSPTS 194 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 L +A ++A T GIFH A G SW + A E+ G +V Sbjct: 195 TLDLAGWSAELAA-------TGKSGIFH-AAGSGHASWCELAA----EAVSAAGLPCRVV 242 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I + QYP KA RPAYS L +KLA T W + VR+ Sbjct: 243 SIPSSQYPQKAKRPAYSVLSTAKLAGTIGREPRPWVQAVRD 283 >gi|290580716|ref|YP_003485108.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025] gi|254997615|dbj|BAH88216.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025] Length = 284 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ K + FL P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLNERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G IAKA + +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQEALQ 275 >gi|24379279|ref|NP_721234.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans UA159] gi|24377197|gb|AAN58540.1|AE014923_4 dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans UA159] Length = 284 Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ K + FL P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G IAKA + +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQEALQEF 277 >gi|313894991|ref|ZP_07828548.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975886|gb|EFR41344.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 137 str. F0430] Length = 285 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 111/296 (37%), Positives = 150/296 (50%), Gaps = 23/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-----EIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G GQ L S CV + E+ V L + + F PD I+ Sbjct: 1 MKILITGATGQ----LGSDCVTEFKARGHEVYGVSSHMFPLSDERAMRAVLEEFEPDSIL 56 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAVD AEDEP+ +NA G +AK A G +YISTDYVF G TP + Sbjct: 57 HAAAYTAVDAAEDEPDPCRLVNAAGTEIVAKLAAEYGCRLLYISTDYVFPGTGDTPYEAD 116 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P P N+YG SKLAGEE VA++ +Y I+R +WV+ G NF+ +ML LA + +S+V Sbjct: 117 DPKGPKNVYGASKLAGEEAVAAHLTDYFIVRISWVFGTHGKNFVKTMLSLADTHKSLSIV 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESA 234 DQ G+PT +A L+ + S R G++H T +G SWA+FA IF Sbjct: 177 SDQIGSPTYTRDLA--------PLLADMIVSDRYGVYHATNEGF-CSWAEFAREIF---- 223 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V + ++ YPTKA RP S L L R+ W++ V L + Sbjct: 224 RAAGKGVAVTSVPSRAYPTKAARPKNSRLSKKSLDAAGFRRLPPWQDAVARFLAEL 279 >gi|228476990|ref|ZP_04061628.1| dTDP-4-dehydrorhamnose reductase [Streptococcus salivarius SK126] gi|228251009|gb|EEK10180.1| dTDP-4-dehydrorhamnose reductase [Streptococcus salivarius SK126] Length = 283 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/290 (33%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAAKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + NY I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVTNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|319946710|ref|ZP_08020944.1| dTDP-4-dehydrorhamnose reductase [Streptococcus australis ATCC 700641] gi|319746758|gb|EFV99017.1| dTDP-4-dehydrorhamnose reductase [Streptococcus australis ATCC 700641] Length = 283 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P +I + AAYTA Sbjct: 3 LITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAQVKPTLIYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKASEKHGATLVYISTDYVFDG--NKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMRNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D G +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEGDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I +WK+ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPSWKDALK 275 >gi|322373392|ref|ZP_08047928.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C150] gi|321278434|gb|EFX55503.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C150] Length = 295 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 15 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFSEVKPSLVYHCAAYTA 74 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + P+ + Sbjct: 75 VDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDK 132 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 133 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 192 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 193 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDTDVE 246 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 247 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 287 >gi|225860395|ref|YP_002741904.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Taiwan19F-14] gi|298229718|ref|ZP_06963399.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae str. Canada MDR_19F] gi|225727776|gb|ACO23627.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Taiwan19F-14] gi|327390777|gb|EGE89117.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA04375] Length = 283 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D++ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDIIDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A I +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFITYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|83310572|ref|YP_420836.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82945413|dbj|BAE50277.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 296 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/283 (34%), Positives = 147/283 (51%), Gaps = 6/283 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G +G++ ++L+ + Q + +GR +D+ P+ + V++N AA Sbjct: 1 MHILVTGADGRVGRALARAALPQGATLTALGRQQLDITDPQAVDRLLTLHACSVVVNTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD+AE E A +IN EG +A+A + GIP I++STDYVFDG S P E +P Sbjct: 61 FTAVDRAETETAAAMAINGEGPAHLARACAARGIPLIHLSTDYVFDGRSPEPYREDAPMA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SK AGEE V ++ ILR +W+Y +F+ +M+ + R + VV DQ Sbjct: 121 PLSVYGASKAAGEEAVRWLQPDHAILRVSWLYGGERGDFVRAMVGAIRAGRPLRVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-G 238 G T + +A A++ +A ++ S RG +H A GG SW + A I E G G Sbjct: 181 GGLTHSDSVATAVLALADKMLRQSLE--RGTYHFAA-GGAASWHEIAALILSELTRAGIG 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 P + Y A RPA S LDC K W++ Sbjct: 238 PV-PLEATSAAAYGLPAARPANSLLDCGKFDRLVGAERPHWQD 279 >gi|325169026|ref|YP_004285772.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325052901|dbj|BAJ83235.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/289 (36%), Positives = 149/289 (51%), Gaps = 3/289 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ +L++ R VGRP D P+ A+ + P +++N AA+TA Sbjct: 7 LITGASGQLGHALAARAPAAGLPARAVGRPGFDFDAPETIAATLAATDPALVVNAAAWTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + A+ N +G +A + G P I++STDYVFDG P E P PL Sbjct: 67 VDAAEANADAAYRANRDGPATLATLCRARGNPLIHVSTDYVFDGTKGAPYTEADPIAPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SK AGEE V + + +ILRTAWV+S G NF +M+ A + VV DQ G P Sbjct: 127 VYGESKAAGEEAVLASGADAIILRTAWVFSATGKNFARTMIAAAHRLPTLRVVADQRGAP 186 Query: 183 TSALQ-IARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T+A + A L E GIFH T+ G SW FA I +A G P Sbjct: 187 TAAEDLAEAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPLP 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL ++ + + W++ I+ I Sbjct: 246 DIVPIATADWPTPARRPADSRLDTTKLKDSFGLALPHWRDATARIVPAI 294 >gi|85710315|ref|ZP_01041380.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Erythrobacter sp. NAP1] gi|85689025|gb|EAQ29029.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Erythrobacter sp. NAP1] Length = 282 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + L + + ++ V + DL + PD++IN AAY Sbjct: 1 MRVLITGAKGQLGRGLVASAPAEADVEAVDIDECDLTDADAIGDLVTTIEPDIVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A +IN+ AI A D +++STD+VFDG S P Sbjct: 61 TAVDKAESDEETARAINSGAVKAIVDAHDG---KLVHVSTDFVFDGRSSRAYQPDDTRAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K GE+ + + +++RTAWVY+ G+NF+ +MLRL +++ ++VV DQ G Sbjct: 118 ISAYGRTKAEGEDHL---RESDILVRTAWVYTAGGTNFVRTMLRLMRDKPALNVVSDQIG 174 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A I + D G FH + D G SW DFA I E+ G Sbjct: 175 APTWAPGLAATIWGLL-------DKDASGTFHHS-DAGTASWYDFAVAIQEEALALGLLD 226 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + I T YPT A RPA+S LD SK + W+ +R +L Sbjct: 227 AAIPITPITTADYPTPAARPAFSLLDSSKTRALLQDGHTHWRVNLRQML 275 >gi|284047954|ref|YP_003398293.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus fermentans DSM 20731] gi|283952175|gb|ADB46978.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus fermentans DSM 20731] Length = 301 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 108/312 (34%), Positives = 154/312 (49%), Gaps = 40/312 (12%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRP----------------DIDLLKPKDFA 43 MK LV G NGQ+ + + + E + G +D+ Sbjct: 1 MKTLVTGVNGQLGYDVMLELQKRGYEAVGCGSSPEYRGMADAVAKLPYVSLDITDDAAVD 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYIST 100 PD + + AA+TAVD AE EPE F++N +G +A+A ++ +YIST Sbjct: 61 RVLQEIKPDCVCHCAAWTAVDAAE-EPENKDKVFAVNVDGTRNLARACQALDAKFMYIST 119 Query: 101 DYVFDGLSRTPI----DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 DYVF+G P EF+P LN+YGKSKL GE V Y I+R AWV+ G+ Sbjct: 120 DYVFNGQGTEPWKADSQEFAP---LNVYGKSKLYGELAVKELLEKYFIVRIAWVFGRNGN 176 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +ML++ K + VV DQ GTPT +AR ++ + +T G +H T + Sbjct: 177 NFVKTMLKVGKNHDTLRVVNDQIGTPTYTADLARLLVDML-------ETEKYGTYHATNE 229 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIR 275 GG +SW DFA IF + G +KV + T++Y +KA RP S LD SKL Sbjct: 230 GGYISWYDFATEIF----RQAGYSTKVIPVTTEEYGLSKARRPFNSRLDKSKLKEQGFQP 285 Query: 276 ISTWKEGVRNIL 287 + W++GVR L Sbjct: 286 LPDWRDGVRRYL 297 >gi|242279116|ref|YP_002991245.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio salexigens DSM 2638] gi|242122010|gb|ACS79706.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio salexigens DSM 2638] Length = 294 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 143/285 (50%), Gaps = 14/285 (4%) Query: 7 GNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + QSL+ + QD+ I + R D D L + + PD I N AYT VD Sbjct: 14 GKTGLLGQSLTEKLQAQDIITIPLSRSDFDPLNEESLTAMLEREEPDFIFNTVAYTMVDL 73 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AEDE A +N + + I I+ STD+VFDG +P E TNP ++YG Sbjct: 74 AEDEENKAHLLNTTLPATLGRLCKQFKIKLIHYSTDFVFDGKKDSPYSEEDKTNPQSVYG 133 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 ++KLAGEE++ + +I+RTAW++ +NF+ +L AKER ++VV DQ G+PT Sbjct: 134 ETKLAGEERLNELNYDEILIIRTAWLFGPHKTNFVHKILGFAKERESLTVVHDQSGSPTY 193 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 +A I++ + +GIF++ + G SW + A E+ + +V Sbjct: 194 TPDLADYSIELLKH-------EAKGIFNV-VNSGKASWCELAT----EAIDSCAINCRVD 241 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + T YPTKA RP YS LD SK W + +R+ + N Sbjct: 242 PVPTSAYPTKATRPPYSVLDTSKFTEVTGKTPRPWVQALRDYVYN 286 >gi|317055133|ref|YP_004103600.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] gi|315447402|gb|ADU20966.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] Length = 295 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 102/273 (37%), Positives = 144/273 (52%), Gaps = 20/273 (7%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI--AFSINAE 79 QDVE + +D+ + PD +I+ AA+TAVD AEDE + +IN + Sbjct: 38 QDVEYRK-----LDITDKEAVEKTLTEVRPDAVIHCAAWTAVDAAEDEENLPKVRAINVD 92 Query: 80 GAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASY 138 G IA + I ISTDYVF+G TP + PLN+YG+SKL GE VA+ Sbjct: 93 GPQNIANVCKKLDCKMIQISTDYVFNGQGETPWQPDCKDYAPLNVYGQSKLDGELAVANT 152 Query: 139 TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 Y I+R AWV+ + G+NF+ +ML + K+ E+ VV DQ GTPT +AR ++ +A Sbjct: 153 LEKYFIVRIAWVFGVNGNNFIKTMLNVGKKYPEVRVVNDQIGTPTYTFDLARLLVDMA-- 210 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHR 257 ++ G +H T +GG +SW DF IF + G +KV + T +Y +KA R Sbjct: 211 -----ESDKYGYYHATNEGGYISWYDFTCEIF----RQAGYDTKVTPVTTAEYGLSKAAR 261 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S LD SKLA + TW++ V L I Sbjct: 262 PFNSRLDKSKLAENGFEPLPTWQDAVARYLKEI 294 >gi|322392753|ref|ZP_08066212.1| dTDP-4-dehydrorhamnose reductase [Streptococcus peroris ATCC 700780] gi|321144391|gb|EFX39793.1| dTDP-4-dehydrorhamnose reductase [Streptococcus peroris ATCC 700780] Length = 284 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEIVEKVFDKVKPTIVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG R P+ + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--RKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHETLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLADNRKE------FGYYHLSNDATEDTTWYDFAIEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + K A I TWK+ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLVK-AKATGFVIPTWKDALK 275 >gi|295691437|ref|YP_003595130.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] gi|295433340|gb|ADG12512.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] Length = 293 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 152/287 (52%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A ++ + + E++ + R + DL P + D+++N AA+ Sbjct: 1 MKILQFGGTGQVATAVQAAAREGTEVVALSRAECDLEDPSAIRRAIQAAQCDLVLNTAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE P+ AF++NA G +A+ + +P I++STD VFDGL+ P E P Sbjct: 61 THVDPAESHPDEAFAVNATAPGVMAEVCAARDLPFIHLSTDAVFDGLTDRPYVETDEARP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG+SKLAGE+ ++ +LR +WV+S +G N++ MLRLA+ER + VV DQFG Sbjct: 121 LNVYGRSKLAGEQAALAHPRA-AVLRISWVFSRYGRNYVSFMLRLARERDVLKVVADQFG 179 Query: 181 TPTSALQIARAIIQIAHN--LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 TPT +A +++ A + D + G+FH A+ G S +FA ++A Sbjct: 180 TPTDGEALAAFLVETAPRWAAAPSGDPAF-GLFHF-ANAGETSRFEFA-----KAAIERD 232 Query: 239 PYSKVYRIFTKQ--YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P S+ T Q + A RP S LD +KL W+ V Sbjct: 233 PLSRAKLEPTTQAAFAEPAPRPPRSPLDTAKLRAVFGFEPEPWRPAV 279 >gi|312863690|ref|ZP_07723928.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis F0396] gi|311101226|gb|EFQ59431.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis F0396] Length = 283 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 148/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAAKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +NY I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKD------YGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|227544135|ref|ZP_03974184.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300909840|ref|ZP_07127301.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] gi|227185882|gb|EEI65953.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300893705|gb|EFK87064.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] Length = 280 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 155/296 (52%), Gaps = 26/296 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVII 55 K L+ G NGQ+ L ++ + R G D +D+ + P+VI Sbjct: 3 KILITGANGQLGSELRNLLDE-----RGGAYDAFDSNQMDITDQAVVNEKISALKPEVIY 57 Query: 56 NPAAYTAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 + +AYTAVD AED ++ + +NA+G +A+AA +G +YISTDY+FDG + + Sbjct: 58 HCSAYTAVDNAEDVAKDLNWQVNADGTRNVAEAAKKVGAKMVYISTDYIFDGTNEGEYEV 117 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +PTNP N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++V Sbjct: 118 DAPTNPRNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTV 177 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQFG PT R + + L++++ G + ++ + SW +FA I + Sbjct: 178 VNDQFGRPT----WTRTLAEFMTYLVDHNQPF--GTYQLSNE-NSCSWYEFATEILKDKD 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + YP KA+RP +S + K +T I W+ + + I Sbjct: 231 VEVAP------VDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVDWQTALGEFMGEI 279 >gi|68643857|emb|CAI34042.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D++ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDIIDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|240140506|ref|YP_002964986.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] gi|240010483|gb|ACS41709.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] Length = 296 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 108/290 (37%), Positives = 148/290 (51%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINP 57 M L++G GQ+ L ++ E +RV PD +D+ A+ + + +IN Sbjct: 1 MDILILGGAGQVGTELQALSWP--EGVRVHAPDRQNLDITDEAAVAAALDARAYAAVINT 58 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE E A+ +NA +A IP +++STDYVFDG +P Sbjct: 59 AAYTAVDKAETEVAAAWRLNALAPALLAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAP 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV D Sbjct: 119 VNPQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLANERDRLTVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTSA +A + + + + G FH DG +W DFA I +A RG Sbjct: 179 QHGCPTSAAYLA-GALAAIALRLAGDEAAPTGTFHCVNDGA-TTWCDFARAIVAGAARRG 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I T YPT A RPA S L L++ + W+ + +IL Sbjct: 237 GRSVAVEGIPTAAYPTPAKRPANSRLSTQSLSDAFGLAPRPWEAALDDIL 286 >gi|332671009|ref|YP_004454017.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484] gi|332340047|gb|AEE46630.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484] Length = 282 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/284 (33%), Positives = 153/284 (53%), Gaps = 17/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSF-SPDVIINPA 58 M+ V+G +G + Q L ++ E + + R ++D+ D AS + DV++N A Sbjct: 1 MRWSVVGASGMLGQDLVAVLRDAGETVTALDRDEVDI---TDLASVRAALVDADVVVNTA 57 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE + AF +NA G G +A+ IG +++STDYVFDG ++TP DE +P Sbjct: 58 AYTAVDQAETDEARAFDVNATGVGNLARVTRDIGARLVHVSTDYVFDGHAQTPYDEDAPL 117 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K AGE V + +++ILRTAW+Y G+ F ++ R+A ER + VV DQ Sbjct: 118 APRSAYGRTKAAGEWAVRAEQPDHLILRTAWLYGAHGACFPKTIARVAAERGGLEVVADQ 177 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++++ + + G +H T+ G +W +FA+ + G Sbjct: 178 VGQPTWTRDVADLVVRLV------AAQAPAGTYHATSS-GTATWHEFAQ----AAVVSAG 226 Query: 239 PYSKVYRIFTKQ-YPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + R T + Y A RP+YS L +L I W+E Sbjct: 227 MDAAIVRPTTAEAYARPAPRPSYSVLGHDRLRAVGVDPIGDWRE 270 >gi|325696769|gb|EGD38657.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK160] Length = 284 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ + Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEL 277 >gi|322389254|ref|ZP_08062814.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 903] gi|321143998|gb|EFX39416.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 903] Length = 283 Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMKNLAKTHKILTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|46202159|ref|ZP_00208408.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 292 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 4/277 (1%) Query: 5 VIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G G++ ++L + + + +GR +D+ P S ++IN AAYTAV Sbjct: 1 MCGAQGRLGRALGCAELPEGTALTGLGRQQLDITDPDAVERALDRDSWSLVINAAAYTAV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE E + AF++N G +A+A + G+P I+ISTDYVFDG + P E P PL++ Sbjct: 61 DRAESERDAAFAVNGTGPAHLARACATRGVPLIHISTDYVFDGTAPDPYPEDHPMAPLSV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG SK AGEE V S ++ I+R +W+Y G +F+ ++ + R + VV DQ G T Sbjct: 121 YGASKAAGEEAVRSLNPDHAIMRVSWLYGGQGGDFVRAIAGAIRAGRHLRVVSDQTGALT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A+A + + ++ ++ RG +H A G +W + A I E + G + Sbjct: 181 HADCVAQAALALGAKMV--NEGLERGTYHFAASGA-ANWHEIAAVILAEMVQLGYKKVPL 237 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 I +Y A RPA S LDC K + W+ Sbjct: 238 EAITATEYGLPAVRPANSRLDCGKFDRLVGLPRPHWQ 274 >gi|305665781|ref|YP_003862068.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170] gi|88710545|gb|EAR02777.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170] Length = 268 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 103/272 (37%), Positives = 145/272 (53%), Gaps = 14/272 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G +GQ+ + L + E+ V + +D+ F SF+ D IN AAYT Sbjct: 7 LVTGASGQLGKCLRKIESDYPELSFVFKDASQLDITNKSAVFKLFDSFNFDFCINCAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V++AE P+ AF IN EG G I++ + ++ISTDYVFDG TP + NP+ Sbjct: 67 NVNEAEKNPKQAFRINEEGTGNISELCRQKEVVLLHISTDYVFDGEKGTPYTKDDMPNPI 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YGKSKLAGE ++ T Y I+RT+W+YS FG NF ++L+LAK + + V +Q G Sbjct: 127 NEYGKSKLAGERQIQQTTRRYYIIRTSWLYSEFGKNFYTTILKLAKSNKILRVTDEQKGC 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+A +A ++QI N I GI H T D P++W DFA+ I E+ + + Sbjct: 187 PTNANNLAAYLMQIIGNEI----VLDYGIVHFT-DCEPMTWFDFAKNIIKENNLQ----N 237 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 V + K T RP S L + NT N Sbjct: 238 TVEVVRDKNNRTFVKRPKNSVLS---IKNTQN 266 >gi|2804692|gb|AAC38680.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] Length = 283 Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGTNGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|227894123|ref|ZP_04011928.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus ultunensis DSM 16047] gi|227864068|gb|EEJ71489.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus ultunensis DSM 16047] Length = 326 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 156/325 (48%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D++ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLKPEYAGVADGSAVTKMPYVPLDITDGAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 PDVI++ AA+TAVD AED+ ++A +N G IA A + +P +Y+S Sbjct: 61 VEKVITDVDPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P +F PLN+YG++KL GE+ V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWKPDFKGYKPLNVYGETKLGGEKAVSDTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H+T Sbjct: 181 IKTMLKVGATHDEVKVVNDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHVTNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T +Y +KA RP S Sbjct: 234 PATKSGFDENGTKTGYISWYDFTKEIY----RQAGYTTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL +STW V L Sbjct: 290 LDKSKLVENGFKPLSTWPHAVHRYL 314 >gi|295693595|ref|YP_003602205.1| dtdp-4-dehydrorhamnose reductase [Lactobacillus crispatus ST1] gi|295031701|emb|CBL51180.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus ST1] Length = 328 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 158/325 (48%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D+ G D +D+ + Sbjct: 1 MKAFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVDDNTAVTKAPYVALDITDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 +PDVII+ AA+TAVD AED+ ++A +N G IA A + +P +Y+S Sbjct: 61 VDKVISEVNPDVIIHCAAWTAVDMAEDDDKVAAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + +F PLN+YG++KL GE+ VA+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVANTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGANHDEVRVVDDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + VR L Sbjct: 290 LDKSKLVENGFKPLPVWPDAVRRYL 314 >gi|221194769|ref|ZP_03567826.1| dTDP-4-dehydrorhamnose reductase [Atopobium rimae ATCC 49626] gi|221185673|gb|EEE18063.1| dTDP-4-dehydrorhamnose reductase [Atopobium rimae ATCC 49626] Length = 299 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 107/310 (34%), Positives = 161/310 (51%), Gaps = 34/310 (10%) Query: 1 MKCLVIGNNGQIAQSLS-------------SMCVQDVEIIRVGRPDIDLLKPKDFASFFL 47 M+ L+ G +GQ+ L S +D E+ + ++D+ + ++F+ Sbjct: 1 MRILITGAHGQLGNELKRLLESGQAEIGPISSAYKDAEVDYIDIDELDISNHEAVDAWFI 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P D++IN AA T VD E + AF+ NA G +A+A +G I++STDYVF G Sbjct: 61 AHDPYDLVINGAAMTNVDGCEKHFDQAFAANALGPMNLARACSRMGSKFIHVSTDYVFPG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEE-KVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P E P++ YG+SKLAGE +A+Y + +V+ R AW+Y G NF+ +M L Sbjct: 121 TDPRPRTEADVPAPISAYGRSKLAGEGLALAAYAHTFVV-RVAWLYGYEGKNFVATMRSL 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ++ EI VV DQFG PTSA +A+ L+ T GI+H T + G SWADF Sbjct: 180 GEKYDEICVVDDQFGNPTSA-------NDLAYELLALGVTDEYGIYHCTNE-GTCSWADF 231 Query: 226 AEYIFWESAERG-GPYSKVYRI----FTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 AE I RG G +V R+ + + +P A RPAYS L+ + LA T ++ W+ Sbjct: 232 AEAIM-----RGSGLDCRVKRVSSADWKEMHPESASRPAYSSLENAHLAATIGNKMRPWQ 286 Query: 281 EGVRNILVNI 290 E + L + Sbjct: 287 EALATYLATV 296 >gi|91202782|emb|CAJ72421.1| similar to dTDP-6-deoxy-L-lyxo-4-hexulose reductase (Rmld) [Candidatus Kuenenia stuttgartiensis] Length = 288 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 1 MKCLVIGNNGQIAQSL-------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 MK L+IG+NG + L S Q + +I I++ + PDV Sbjct: 1 MKILIIGSNGALGWELRNGLPHLSETEKQPLSVICASHSQIEITNASNTFEAIARTMPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA+T VD E A+++NA+GA +A A ++ I+ISTDYVFDG TP + Sbjct: 61 IINCAAFTDVDACETNIGKAYAVNADGAKNVALAGKNLHARVIHISTDYVFDGAKNTPYN 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E PL++YG+SK AGEE V NY I+R + +Y SNF+ +L L E+ +S Sbjct: 121 ETDLPRPLSVYGRSKRAGEEAVQEINGNYTIIRISRLYGQHKSNFVTKILHLGLEKHVVS 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQFG+PT A + A+ + L GI+H+ D G SW ++A IF S Sbjct: 181 VVTDQFGSPTYAADLVHALWYVL-------SLDLHGIYHIAND-GICSWYEWAREIFRLS 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + S I + + A P S L+C+K ++ W+E + + L Sbjct: 233 NIQVSLQS----IKAEDFKRAATVPQNSSLNCTKFVQATGHKMRPWQEALEDYL 282 >gi|167755698|ref|ZP_02427825.1| hypothetical protein CLORAM_01213 [Clostridium ramosum DSM 1402] gi|237734665|ref|ZP_04565146.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167704637|gb|EDS19216.1| hypothetical protein CLORAM_01213 [Clostridium ramosum DSM 1402] gi|229381993|gb|EEO32084.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 283 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 158/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K V+G+NGQI +++ + ++E++ + ++D+ D SF PD+IIN AA Sbjct: 2 LKVWVVGSNGQIGTAINEVIEPLEIEVLNTDQDELDITNTDDVISFGEINRPDIIINCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T V K E + AF +NA G + A IG + ISTD VFDG S TP +EF Sbjct: 62 ITDVYKCERNRDQAFRVNALGPRNLCIVARKIGAKVVQISTDDVFDGKSDTPYNEFDVAK 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SK AGE+ V +T+ + I+R+ W+Y G+NF+ + +K+ ++V DQF Sbjct: 122 PKTVYGCSKKAGEDYVKEFTHKHFIIRSNWIYGQNGTNFVNEFIAKSKKEDFLNVANDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +ARAI+ + +TS G +H+T G S +FA+ E +++ Sbjct: 182 GSPTSAKDLARAILYLM-------ETSEYGTYHITC-KGVCSRYEFAK----EISKQINS 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + TK+ + RP+Y LD L + ++ TW+E ++ + I Sbjct: 230 HVMITPVSTKEMADEVVRPSYVVLDNFILRLVNGYQMPTWQESLQEYIKEI 280 >gi|198275010|ref|ZP_03207542.1| hypothetical protein BACPLE_01169 [Bacteroides plebeius DSM 17135] gi|198272457|gb|EDY96726.1| hypothetical protein BACPLE_01169 [Bacteroides plebeius DSM 17135] Length = 303 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 103/305 (33%), Positives = 154/305 (50%), Gaps = 21/305 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC-----------VQDVEIIRVGRPDIDLLKPKDFASFFLSF 49 M LV G NGQ+ + + V +VE + DI L+ + Sbjct: 1 MNILVTGANGQLGNEMRLISKEMTDHFIFTDVTEVEGLETTLLDITNLEA--VKEVVKTH 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS- 108 D I+N AAYT VDKAE + + ++NA+ +A A G +++STDYVF G Sbjct: 59 KVDCIVNCAAYTNVDKAETDVDFCRTLNAKAPQNLAIAMKEAGGLLVHVSTDYVFGGDPY 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P E P +YG +KL GEE + + +YVI+RTAW+YS FG NF+ +ML L Sbjct: 119 NIPCREDQKGTPTGVYGLTKLEGEENIKAAGCDYVIIRTAWLYSEFGKNFVKTMLNLTAT 178 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIEN---SDTSLRGIFHMTADGGPVSWADF 225 + ++ VV DQ GTPT A +A+AI + + + S S GI+H + + G SW DF Sbjct: 179 KPQLKVVFDQAGTPTYAYDLAKAIEVVLKDYTKEQPASAYSKTGIYHFSNE-GVCSWYDF 237 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + I +A G + + ++P+ RPAYS LD +K+ T IRI W + ++ Sbjct: 238 TKTI---AAMAGHMECDIQPCHSNEFPSPVKRPAYSVLDKTKIKETFGIRIPYWTDSLKV 294 Query: 286 ILVNI 290 + N+ Sbjct: 295 CIENL 299 >gi|148988118|ref|ZP_01819581.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP6-BS73] gi|68642410|emb|CAI32828.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147926582|gb|EDK77655.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP6-BS73] Length = 283 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPVKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|168485503|ref|ZP_02710011.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|168486649|ref|ZP_02711157.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|168487601|ref|ZP_02712109.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|194398504|ref|YP_002037043.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae G54] gi|68642462|emb|CAI32872.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642544|emb|CAI32940.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643180|emb|CAI33474.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643826|emb|CAI34017.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|183569610|gb|EDT90138.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|183570363|gb|EDT90891.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|183571159|gb|EDT91687.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|194358171|gb|ACF56619.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus pneumoniae G54] Length = 283 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VNP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|325689985|gb|EGD31989.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK115] Length = 284 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFALEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTKAKATGFI-IPTWQDALKEF 277 >gi|68643267|emb|CAI33545.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVTEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|68643633|emb|CAI33851.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|257893560|ref|ZP_05673213.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,408] gi|257829939|gb|EEV56546.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,408] Length = 283 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDEPEIAFS-INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNP 120 VDKAE+E + IN +G +A AA ++ +YISTDYVFDG ++ E TNP Sbjct: 63 VDKAEEEEKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ P Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDTDVEVAP- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + ++++P KA RP YS + K I TW+E + +L Sbjct: 235 -----VTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|327459911|gb|EGF06251.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1057] gi|327473783|gb|EGF19201.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK408] Length = 284 Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLAKAKATGFI-IPTWQDALKEF 277 >gi|68643118|emb|CAI33423.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643150|emb|CAI33450.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643351|emb|CAI33618.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643547|emb|CAI33781.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643577|emb|CAI33805.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643718|emb|CAI33925.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643937|emb|CAI34108.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643967|emb|CAI34134.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643997|emb|CAI34160.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|254374809|ref|ZP_04990290.1| hypothetical protein FTDG_00985 [Francisella novicida GA99-3548] gi|151572528|gb|EDN38182.1| hypothetical protein FTDG_00985 [Francisella novicida GA99-3548] Length = 320 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 111/314 (35%), Positives = 156/314 (49%), Gaps = 35/314 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-------IRVGRPDIDLLKPKDFASFFL-SFSPD 52 MK LV G NGQ+ L + EI I P++D F F S S D Sbjct: 1 MKVLVTGGNGQLGSELRELVNISREIPGQVGNDIVSSHPELDSGSHNSFEYIFTHSKSLD 60 Query: 53 V-----------------IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 + IIN AAYTAVDKAE + E+A IN + + A + Sbjct: 61 ITDHQAVERFIIDNSIGAIINCAAYTAVDKAESDIEMADKINHLAVVNMVELAKKYSMKL 120 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIF 154 I+ISTDYVFDG + P E TNP ++YG +KLAGE+ + N +I+RT+WVYS + Sbjct: 121 IHISTDYVFDGKNYKPYLETDITNPQSVYGITKLAGEKAIQEINPKNSIIIRTSWVYSYY 180 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G+NF+ +ML L + R + V+ DQ G+PT A +A+ I+ I + SD+ H+ Sbjct: 181 GNNFVKTMLCLGQNRDSLDVIFDQVGSPTYAKDLAKVILDILPAF-DKSDSEFDLGSHVE 239 Query: 215 ----ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 ++ G +SW DFA+ I + +V I T YPT A RP YS L+ +K+ Sbjct: 240 IYNYSNEGVLSWYDFAKEIM----DIANINCQVNPIETAAYPTPAKRPHYSLLNKNKIKE 295 Query: 271 THNIRISTWKEGVR 284 I I WK ++ Sbjct: 296 DFGISIPYWKVSLK 309 >gi|89994598|emb|CAI34067.2| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PEPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|294668986|ref|ZP_06734072.1| dTDP-4-dehydrorhamnose reductase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308978|gb|EFE50221.1| dTDP-4-dehydrorhamnose reductase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 287 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+ QS+ +D E+I +D+ + SF PD ++N AAY Sbjct: 1 MRILLTGSKGQLGQSIRKRLPEDWELIATDSKTLDITDHEAVLKMVESFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AV KA ++ E F++NA G +A+AA S+G ++ISTDYVF G SR P E P NP Sbjct: 61 MAVGKAAEDVERVFAVNASGTRNLAQAAFSVGAKFVHISTDYVFGGGSRIPYSEIDPPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +Y +SKLAGE + + V++RT+WVYS +G NF+ ++L A E+ EI + D Sbjct: 121 KCVYARSKLAGELLALASEPDTVVVRTSWVYSEYGRNFIQNLLHQAAEQGEIRLSADNAA 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A II++ +G+ H + +A FA+ + AER + Sbjct: 181 CPTYAGDLADVIIRLLQ-----LPKFPQGLLHYCGNKAFSDYA-FAQAVLKAEAERNPAF 234 Query: 241 SKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + K P YS L+C K A W++ V ++L + Sbjct: 235 EMPQLVQASAAEMGKGGAPLYSVLNCEK-ARALGFVQGDWQKSVPSVLAAL 284 >gi|325680905|ref|ZP_08160442.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 8] gi|324107369|gb|EGC01648.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 8] Length = 295 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 106/312 (33%), Positives = 154/312 (49%), Gaps = 42/312 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV----------------QDVEIIRVGRPDIDLLKPKDFAS 44 MK V G GQ+ + + QD+E + +D+ Sbjct: 1 MKFFVTGVGGQLGHDVMAELAKRGYEAVGSDILDSVPQDIEYKK-----LDITDKSAVEQ 55 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + PDV+++ AA+TAVD AEDE I +IN +G IA+ ++ IYISTDY Sbjct: 56 VITAVKPDVVVHCAAWTAVDAAEDEENIPKVRAINVDGTRNIAEVCKALDCKMIYISTDY 115 Query: 103 VFDGLSRTPIDEFSPT----NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 VFDG + + P P N+YG+SKL GE VA Y I+R AWV+ GSNF Sbjct: 116 VFDGRGE---EAWKPDCKDYAPQNVYGQSKLDGEFAVAETLEKYFIVRIAWVFGKNGSNF 172 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K+ E+ VV DQ GTPT +AR ++ +A +T G +H T +GG Sbjct: 173 VKTMLNVGKKHPEVRVVNDQIGTPTYTPHLARLLVDMA-------ETDKYGYYHATNEGG 225 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF I+ + G +KV + T +Y +KA RP S LD SKL + Sbjct: 226 YISWYDFTCEIY----RQAGLDTKVTPVTTAEYGLSKAARPFNSRLDKSKLTEKGFKPLP 281 Query: 278 TWKEGVRNILVN 289 TW+E + +++ Sbjct: 282 TWQEALSEFIIH 293 >gi|68643210|emb|CAI33498.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|328945985|gb|EGG40132.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1087] Length = 284 Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|15902367|ref|NP_357917.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae R6] gi|116515912|ref|YP_815846.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae D39] gi|168482597|ref|ZP_02707549.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1873-00] gi|2804686|gb|AAC38675.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804698|gb|AAC38685.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804717|gb|AAC38701.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|4200436|gb|AAD10184.1| Cps2O [Streptococcus pneumoniae D39] gi|15457878|gb|AAK99127.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae R6] gi|68642310|emb|CAI32735.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643689|emb|CAI33898.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644389|emb|CAI34484.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|116076488|gb|ABJ54208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae D39] gi|172043655|gb|EDT51701.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1873-00] gi|332077649|gb|EGI88110.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA41301] Length = 283 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|68643515|emb|CAI33751.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATKDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|168494597|ref|ZP_02718740.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC3059-06] gi|183575540|gb|EDT96068.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC3059-06] gi|332203524|gb|EGJ17591.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA47368] Length = 283 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|68643605|emb|CAI33828.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643661|emb|CAI33873.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGRELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEIL------ 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G +V + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 229 KGTDVEVKPVDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|298255294|ref|ZP_06978880.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502162|ref|YP_003724102.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae TCH8431/19A] gi|298237757|gb|ADI68888.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae TCH8431/19A] Length = 283 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQSLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|303233356|ref|ZP_07320025.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae PB189-T1-4] gi|302480485|gb|EFL43576.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae PB189-T1-4] Length = 303 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 157/307 (51%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSM-------------CVQDVEIIRVGRPDIDLLKPKDFASFFL 47 M LV G++GQ+ ++L + + ++ + D D+ + +F Sbjct: 1 MHILVTGSHGQLGRALEHLFSHGSSEAGALPASYKAAQVDYIDMDDCDISSQQAVEEWFS 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 S P D++IN AA T VD + AF+ NA+G +A A ++ +++STDYVF G Sbjct: 61 SHEPYDLVINCAAMTNVDGCDANRLAAFAANAQGPYNLAHACNNQHAALVHVSTDYVFAG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + P E P++ YG+SKLAGE V I+RTAW+Y G NF+ +ML LA Sbjct: 121 TQQRPRVEDDMVCPISGYGQSKLAGEALVRVTCPASFIVRTAWLYGYTGKNFVKTMLSLA 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + ISVV DQFG PTSA +A AI++IA + G++H T + G SWADFA Sbjct: 181 QTHESISVVDDQFGNPTSAEDLALAIVRIAAG-------APYGVYHCTCE-GTCSWADFA 232 Query: 227 EYIFWESAERGGPYSKVYRI----FTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + I E A+ +V RI + +Q+P A RP YS LD + + + +W+E Sbjct: 233 QAIMDEFAKP----CRVTRISSATYKEQHPQSASRPHYSSLDNANMRRAGIPPMRSWREA 288 Query: 283 VRNILVN 289 + + N Sbjct: 289 LHSYATN 295 >gi|324990948|gb|EGC22883.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK353] gi|325687809|gb|EGD29829.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK72] gi|327469634|gb|EGF15103.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK330] Length = 284 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIVRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|125717701|ref|YP_001034834.1| dTDP-L-rhamnose synthase [Streptococcus sanguinis SK36] gi|125497618|gb|ABN44284.1| DTDP-L-rhamnose synthase, putative [Streptococcus sanguinis SK36] Length = 284 Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 152/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNTQVVDNVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTYKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT + +I +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLTEFMIHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|226323947|ref|ZP_03799465.1| hypothetical protein COPCOM_01724 [Coprococcus comes ATCC 27758] gi|225207496|gb|EEG89850.1| hypothetical protein COPCOM_01724 [Coprococcus comes ATCC 27758] Length = 307 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/311 (34%), Positives = 158/311 (50%), Gaps = 32/311 (10%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD---------IDLLKPKDFASFFLSFS 50 +K LV G GQ+ + + + + E+ G +D+ + + Sbjct: 2 LKFLVTGAAGQLGKDVVRELENRGYEVTGSGSKKRKTAGRYVKMDITDRNEVEAVMKKLR 61 Query: 51 PDVIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD++I+ AA+TAVD AE EPE + +N +G +A A I +YISTDYVF G Sbjct: 62 PDIVIHCAAWTAVDAAE-EPENYEKVWEVNGKGTSNLASACQKIHAKMVYISTDYVFGGQ 120 Query: 108 SRTP----IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 P +EFSP LN YG++KL GE+ V + Y I+R AWV+ G+NF+ +ML Sbjct: 121 GSRPWEPDCEEFSP---LNRYGETKLQGEQTVKAELKEYFIVRIAWVFGKNGNNFVKTML 177 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 K R+E+ VVCDQ GTPT +A+ + + S T GI+H+T +G VSW Sbjct: 178 EQGKRRKELRVVCDQIGTPTYTADLAKFLANL-------SMTKRYGIYHVTNEGEYVSWY 230 Query: 224 DFAEYIFWESAERG-GPYS--KVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTW 279 DFA+ IF ++ + G Y+ KV + T +Y +KA RP S LD ++ + W Sbjct: 231 DFAKEIFAQAVKLGEKEYADVKVIPVTTAEYGISKAARPFNSRLDRKRICEEGFQPLPVW 290 Query: 280 KEGVRNILVNI 290 K + L + Sbjct: 291 KNALERYLQEV 301 >gi|169834012|ref|YP_001693879.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Hungary19A-6] gi|13377433|gb|AAK20694.1|AF316640_14 RmlD [Streptococcus pneumoniae] gi|3907613|gb|AAC78677.1| dTDP-L-rhamnose synthase Cps19aO [Streptococcus pneumoniae] gi|68643375|emb|CAI33637.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644532|emb|CAI34599.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|168996514|gb|ACA37126.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Hungary19A-6] Length = 283 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGRELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|149018055|ref|ZP_01834514.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP23-BS72] gi|3818499|gb|AAC69541.1| Cps23fR [Streptococcus pneumoniae] gi|147931619|gb|EDK82597.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP23-BS72] Length = 283 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVVEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|68644418|emb|CAI34507.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAAFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|307708208|ref|ZP_07644675.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis NCTC 12261] gi|307615654|gb|EFN94860.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis NCTC 12261] Length = 287 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 149/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGAKGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ E + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDG--KKPVGEEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENCKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 IKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|68644635|emb|CAI34686.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLVK-AKATGFVIPTWQDALQ 275 >gi|55821460|ref|YP_139902.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG 18311] gi|55823390|ref|YP_141831.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus CNRZ1066] gi|55737445|gb|AAV61087.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG 18311] gi|55739375|gb|AAV63016.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYTA Sbjct: 10 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDADKVDEVFAEVKPTLVYHCAAYTA 69 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G P+ + Sbjct: 70 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNG--EKPVGQEWEVDDK 127 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV D Sbjct: 128 PDPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVND 187 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 188 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDTDVE 241 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 242 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 282 >gi|149006113|ref|ZP_01829842.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP18-BS74] gi|307126575|ref|YP_003878606.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae 670-6B] gi|13377465|gb|AAK20724.1|AF316642_18 RmlD [Streptococcus pneumoniae] gi|18376694|gb|AAL68418.1|AF246897_15 dTDP L-rhamnose synthase [Streptococcus pneumoniae] gi|18376706|gb|AAL68429.1| dTDP L-rhamnose synthase [Streptococcus pneumoniae] gi|68642433|emb|CAI32848.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642489|emb|CAI32895.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642516|emb|CAI32916.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643293|emb|CAI33569.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643322|emb|CAI33593.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643404|emb|CAI33660.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643434|emb|CAI33685.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643749|emb|CAI33951.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644362|emb|CAI34460.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147762469|gb|EDK69430.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP18-BS74] gi|149929320|gb|ABR37234.1| RmlD [Streptococcus pneumoniae] gi|306483637|gb|ADM90506.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae 670-6B] gi|312176764|gb|ADQ39191.1| RmlD [Streptococcus pneumoniae] gi|332076802|gb|EGI87264.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA17545] Length = 283 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V +D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAKMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|312278797|gb|ADQ63454.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus thermophilus ND03] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAVEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|68643239|emb|CAI33521.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V +D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAKMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAKNRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|298528457|ref|ZP_07015861.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans ASO3-1] gi|298512109|gb|EFI36011.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans ASO3-1] Length = 286 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 92/286 (32%), Positives = 151/286 (52%), Gaps = 14/286 (4%) Query: 7 GNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + Q+L M + ++ + GR ++DL + + D++ N AYT VD+ Sbjct: 11 GRTGLLGQALVQVMQGEGLKALAPGRKELDLFDARQVEDTIRKNNIDLVANAVAYTGVDQ 70 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE++ + A+ +N + G + + + ++ STDYVFDG TP PL +YG Sbjct: 71 AEEDQDEAYRLNRDLPGILGQVCRENNVGLVHYSTDYVFDGKKNTPYSTDDTPRPLCVYG 130 Query: 126 KSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 +SKLAGEE + S + +ILR+AW++ F +NF+ M+++A+ R +SV+ DQ G+PT Sbjct: 131 RSKLAGEELLMQSPWDGLLILRSAWLFGPFKTNFVSKMIQMAESGRPLSVIHDQTGSPTC 190 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 L +AR +++ TS G+FH+ + G SW + A E+ G S+V Sbjct: 191 TLDLARYSLELV-----KKQTS--GLFHVV-NKGQASWCELAS----EALMCAGLSSRVN 238 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + +YP KA RP+YS LD SK + I W +R + + Sbjct: 239 PVSSGEYPQKARRPSYSVLDTSKFSMVTGITPRPWVHALREYVFQV 284 >gi|221231239|ref|YP_002510391.1| dTDP-4-dehydrorhamnose reductase RmlD [Streptococcus pneumoniae ATCC 700669] gi|2804705|gb|AAC38691.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804711|gb|AAC38696.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804724|gb|AAC38707.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804730|gb|AAC38712.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|3320402|gb|AAC38760.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|220673699|emb|CAR68192.1| dTDP-4-dehydrorhamnose reductase RmlD [Streptococcus pneumoniae ATCC 700669] gi|309952142|gb|ADO95351.1| RmlD [Streptococcus pneumoniae] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +A+A++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVARASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|296876720|ref|ZP_06900768.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 15912] gi|296432222|gb|EFH18021.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 15912] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKD------YGYYHLSNDAKEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|116628183|ref|YP_820802.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMD-9] gi|116101460|gb|ABJ66606.1| dTDP-4-dehydrorhamnose reductase [Streptococcus thermophilus LMD-9] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNG--EKPVGQEWEVDDK 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAVEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|270293357|ref|ZP_06199566.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. M143] gi|270278206|gb|EFA24054.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. M143] Length = 284 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNVDYVAVDVAEMDITNSEMVEKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------YGYYHLSNDAAEDTTWYDFAVEILKDSD-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + ++P KA RP S + +K A I TW++ ++ Sbjct: 233 ----VEVLPVDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|149012104|ref|ZP_01833213.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP19-BS75] gi|1881547|gb|AAC44972.1| 32.3 kDa cps19fO gene product [Streptococcus pneumoniae] gi|68643461|emb|CAI33706.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147763706|gb|EDK70640.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP19-BS75] Length = 283 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +A+A++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTKNVARASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QYGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALQEF 277 >gi|312867796|ref|ZP_07728002.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis F0405] gi|311096859|gb|EFQ55097.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis F0405] Length = 283 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKA++ G +YISTDY+FDG P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYIFDG--NKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|288905578|ref|YP_003430800.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus UCN34] gi|306831668|ref|ZP_07464825.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978606|ref|YP_004288322.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732304|emb|CBI13873.1| Putative dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus UCN34] gi|304426093|gb|EFM29208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178534|emb|CBZ48578.1| rmlD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID---EFSPT 118 VD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + P+ E T Sbjct: 63 VDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDG--KKPVGQEWEVDDT 120 Query: 119 -NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V YT+ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQEALQEF 277 >gi|312865885|ref|ZP_07726106.1| dTDP-4-dehydrorhamnose reductase [Streptococcus downei F0415] gi|311098289|gb|EFQ56512.1| dTDP-4-dehydrorhamnose reductase [Streptococcus downei F0415] Length = 283 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 146/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+ L + + + E + V ++D+ F P ++ + AAYTA Sbjct: 3 LITGSKGQLGTELRYLLDERNEEYVAVDVAEMDITDAAKVDEVFAQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE E+ ++IN G IAKAA G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENIAKAAAKYGATLVYISTDYVFDG--QKPVGQEWLETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y ++Y I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRLGEEAVEKYLDHYYIIRTAWVFGNYGKNFVFTMQNLAKTHPRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N G +H++ D +W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYVTEN------QKNFGYYHLSNDATEDTTWYDFAKEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VAP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQEALQEF 277 >gi|332361921|gb|EGJ39723.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK49] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M L+K + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLSKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|167648866|ref|YP_001686529.1| dTDP-4-dehydrorhamnose reductase [Caulobacter sp. K31] gi|167351296|gb|ABZ74031.1| dTDP-4-dehydrorhamnose reductase [Caulobacter sp. K31] Length = 280 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/270 (34%), Positives = 142/270 (52%), Gaps = 6/270 (2%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 ++ V V+++ + R ++DL P ++ D+++N A +T VDKAE EPE A ++ Sbjct: 4 AAATVDHVDLVTLSRAEVDLTDPPAISAAIAGADCDLVLNCAGFTLVDKAEVEPEAARAV 63 Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 NA A+A+A G P I++STD VFDG P E PL++YG++KL GE V Sbjct: 64 NALAPLAMAQACARRGAPLIHLSTDCVFDGALDRPYCETDEARPLSVYGQTKLDGEVGVL 123 Query: 137 SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 ++ + V+LR +WV+S FG NF+ +ML LA+ R + VV DQ+G PT A +A I+ A Sbjct: 124 TWERS-VVLRISWVFSRFGRNFVRTMLELARARDMLKVVDDQYGNPTDASALAGFILATA 182 Query: 197 HNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 +D G+FH T G +A I + A R +++ I + +P A Sbjct: 183 GRWSSAEADDPAFGLFHFTNTGTASRFALAQAAIERDPAAR----ARLEPIAKRDFPELA 238 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 RP LDC KLA W+ V+ Sbjct: 239 ARPLNGALDCGKLARVFGYTPEPWRPAVQR 268 >gi|325694243|gb|EGD36159.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK150] gi|327489334|gb|EGF21127.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1058] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTKAKATGFI-IPTWQDALKEF 277 >gi|291546734|emb|CBL19842.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5] Length = 310 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/264 (36%), Positives = 140/264 (53%), Gaps = 14/264 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSI 91 +D+ + A PD +++ AA+TAVD AEDE E +N G IA + Sbjct: 53 LDITDKEAVAKTIREVKPDAVVHCAAWTAVDAAEDEENREKVRLVNVVGTQNIADICKEL 112 Query: 92 GIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 GI +YISTDYVFDG TP D + P N+YG++KL GE V+ + + I+R AWV Sbjct: 113 GIKMMYISTDYVFDGQGTTPWDPDCKDYAPQNVYGQTKLDGELAVSGTIDKFFIVRIAWV 172 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + G NF+ +M+ L K +++VV DQ GTPT +AR ++ + +T G Sbjct: 173 FGKNGKNFIRTMVNLGKTHDKLTVVSDQIGTPTYTYDLARLLVDMV-------ETEKYGY 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERG-GPYSKVY--RIFTKQYP-TKAHRPAYSCLDCS 266 +H T +GG +SW DF + IF ++A G Y KV + T +Y +KA RP S LD S Sbjct: 226 YHATNEGGFISWYDFTKEIFRQAAALGHKEYEKVEVSPVTTAEYGVSKAVRPFNSRLDKS 285 Query: 267 KLANTHNIRISTWKEGVRNILVNI 290 KL + TW++ + L I Sbjct: 286 KLVKNGFQPLPTWQDALERYLKEI 309 >gi|226305634|ref|YP_002765594.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis PR4] gi|226184751|dbj|BAH32855.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis PR4] Length = 279 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 149/286 (52%), Gaps = 14/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPD-VIINPAAYT 61 L+ G GQ+ + ++ + VG ++D+ + F SPD V+IN AAYT Sbjct: 5 LLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFV---SPDSVLINCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + E A ++N G +A+A G I++STDYVF G + TP D +PT P Sbjct: 62 AVDAAETDQEAARAVNEIGPLNLARACARAGSRLIHVSTDYVFPGDASTPYDVDAPTGPA 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KL GE V + ++RTAWVYS G++F+ +M RL ER ++VV DQ G+ Sbjct: 122 TVYGRTKLDGEIAVRESGADVAVVRTAWVYSGVGTDFVATMRRLEAEREFVNVVDDQIGS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT ++ +A I+++A + T FH+T +GG SW + A +F E G + Sbjct: 182 PTYSVDLAGGIVELALRDFTGAST-----FHLT-NGGQASWYELARAVF---EEIGADPA 232 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + A RPAYS L + W+E + L Sbjct: 233 RVRPCSSADFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAAL 278 >gi|322374907|ref|ZP_08049421.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C300] gi|321280407|gb|EFX57446.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C300] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/288 (33%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + +V+ + V ++D+ K F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERNVDYVAVDVAEMDITNAKMVEKVFAEIKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA I +S Sbjct: 181 QHGRPT----WTRTLAEFMTYLTENQKAF--GYYHLSNDAAEDTTWYDFAVEILKDSDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + ++P KA RP S + +K A I +W++ ++ Sbjct: 235 VVP------VDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPSWQDALK 275 >gi|229825470|ref|ZP_04451539.1| hypothetical protein GCWU000182_00830 [Abiotrophia defectiva ATCC 49176] gi|229790033|gb|EEP26147.1| hypothetical protein GCWU000182_00830 [Abiotrophia defectiva ATCC 49176] Length = 318 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 15/260 (5%) Query: 31 RPDIDLLKPKDF---ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +I L D+ S +F PD +IN AYTAVD E+ E A +N G +A Sbjct: 57 RAEITALDITDYYLVKSALENFMPDTVINCVAYTAVDDCEEHEEEARLVNETGVKNLALV 116 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + ++ISTDYVFDG P E +P++ YG++K GE+ V + Y ++RT Sbjct: 117 VKELDASLVHISTDYVFDGNGTKPYMEEDTVSPVSAYGRTKTFGEKAVCENLDKYFLVRT 176 Query: 148 AWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 AW+Y G NF+ +ML L+++ + + VV DQ G+PTSA ++AR II + T Sbjct: 177 AWLYGE-GKNFVKTMLALSEKNKTLRVVSDQTGSPTSAAELARFIIYLIR-------TDK 228 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 GI+H D G SW +F + I S G +V I +++Y TKA RP YS L K Sbjct: 229 YGIWHGVCD-GSTSWYEFTKEIMRLS---GKTEIEVLPIKSEEYKTKAKRPHYSVLSNEK 284 Query: 268 LANTHNIRISTWKEGVRNIL 287 L +I +W+E ++ L Sbjct: 285 LHKETEFKIKSWQEALKEYL 304 >gi|332362796|gb|EGJ40590.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK355] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHNTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|306833809|ref|ZP_07466934.1| dTDP-4-dehydrorhamnose reductase [Streptococcus bovis ATCC 700338] gi|304424003|gb|EFM27144.1| dTDP-4-dehydrorhamnose reductase [Streptococcus bovis ATCC 700338] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID---EFSPT 118 VD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + P+ E T Sbjct: 63 VDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDG--KKPVGQEWEVDDT 120 Query: 119 -NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V YT+ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRLGEEAVEKYTDRFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPTWQEALQEF 277 >gi|48474160|dbj|BAD22631.1| dTDP-rhamnose synthase [Streptococcus oralis] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +V+ + V ++D+ + F +P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNVDYVAVDVAEMDITNAEMVEKVFAEVNPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PGPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 181 QHGRPTWTRTLAEFMTYLTDNQKE------YGYYHLSNDSTEDTTWYDFAVEILKDSD-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + ++P KA RP S + +K A T I TW++ ++ Sbjct: 233 ----VEVIPVDSSKFPAKAKRPLNSTMSLAK-AKTTGFVIPTWQDALK 275 >gi|120402727|ref|YP_952556.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1] gi|119955545|gb|ABM12550.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 134/240 (55%), Gaps = 11/240 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV++N AA+T VD AE EP+ A ++NA GAG +A+A G I++STDYVF G R P Sbjct: 53 DVVVNCAAFTKVDAAEAEPDRAHAVNAVGAGNVAQACARAGASLIHLSTDYVFSGSRRRP 112 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERR 170 + T PL++YG++KLAGE+ V + + ++RTAW+Y G++F M R A+ Sbjct: 113 YEIDDETGPLSVYGRTKLAGEQAVLAALPDAYVVRTAWIYEGGAGTDFAAVMRRAAQGDG 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G+PT + RA++QIA D +RG A+ G VS D A+ +F Sbjct: 173 TVEVVADQIGSPTYVGDLCRALLQIA-------DGGVRGPVLHAANLGAVSRFDQAQAVF 225 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 AE G S+V + + ++P A RPAYS L K A + W++ + L + Sbjct: 226 ---AELGADPSRVRPVGSDRHPRPAPRPAYSALSPVKSAEAGLTPLRPWRDALAEALATV 282 >gi|153853088|ref|ZP_01994497.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814] gi|149753874|gb|EDM63805.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814] Length = 282 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 152/288 (52%), Gaps = 14/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K ++G +GQI +++ + ++E+ + ++D+ + +F + PDVIIN AA Sbjct: 2 LKLWIVGASGQIGSAINEVLDPLEMEVFNTDKEELDITDTDEVLNFGVINRPDVIINCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D E EPE+A+ +NA GA ++ A G + ISTD VFDG+ TP EF TN Sbjct: 62 VTDTDLCEKEPELAYRVNALGARNLSIVARKTGAKMVQISTDDVFDGIRHTPYTEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SK AGE V +T+ + ILR+ WVY G+NF+ +L A + E+ + DQF Sbjct: 122 PKTVYGRSKRAGENYVKEFTHKHFILRSNWVYG-NGNNFVNRVLHAADTKDELLIASDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR I+ + T+ G +H T G + +FA+ E + G Sbjct: 181 GSPTSAKDLARIILYLIK-------TNEYGTYHATCQ-GVCNRYEFAQ----EVLKLAGK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + T + + RPAY+ LD L + + W+ ++ + Sbjct: 229 RITLRPVVTSESDLSSTRPAYAVLDNFILRIINVYEMPDWRASLKEYM 276 >gi|157149997|ref|YP_001450309.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gordonii str. Challis substr. CH1] gi|157074791|gb|ABV09474.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gordonii str. Challis substr. CH1] Length = 283 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEKVEKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDVAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + +K A I +W++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLAK-AKATGFVIPSWQDALKEF 277 >gi|325269112|ref|ZP_08135732.1| dTDP-4-dehydrorhamnose reductase [Prevotella multiformis DSM 16608] gi|324988499|gb|EGC20462.1| dTDP-4-dehydrorhamnose reductase [Prevotella multiformis DSM 16608] Length = 293 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 150/291 (51%), Gaps = 15/291 (5%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L + +D I + G +D+ +D + II Sbjct: 1 MNILVTGANGQLGNEIQLVARNSKDNYIFTDVCEGYTKLDITNLEDIRQMVHDHNITCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI ++NA G +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGEIVETLNAVAPGNLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG SKL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L + + V Sbjct: 121 EMKGTPTGVYGLSKLHGEEKIQATGVKHIILRTAWLYSEFGHNFVKTMMNLTATKPLLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWES 233 V DQ GTPT A +A I +++IEN GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAETI----YDIIENRKYEGSSGIYHFSNE-GVCSWYDFTIKI---A 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G ++ + ++P+ RPAYS LD +K+ T ++I W + ++ Sbjct: 233 ELAGNTTCEILPCHSDEFPSPVRRPAYSVLDKTKIKETFGMKIPYWVDSLK 283 >gi|332361561|gb|EGJ39365.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1056] Length = 284 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSCFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|332366337|gb|EGJ44089.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1059] Length = 284 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT + + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLTEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|289522626|ref|ZP_06439480.1| dTDP-4-dehydrorhamnose reductase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504462|gb|EFD25626.1| dTDP-4-dehydrorhamnose reductase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 287 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M + G NG + + ++ + ++ +++ + +D+ S+ P V++N AAY Sbjct: 3 MIIAITGPNGLLGREVAKVFKKEYDVVELPHDILDITNLNQVREVLSSYMPTVLVNCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+EP A +N G +A A + I ++ISTDYVF+G + TP F +P Sbjct: 63 TAVDRAEEEPAKANLVNGLGVRNLALACRKLDISLVHISTDYVFNGNTDTPWRIFDKRDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK GE + + Y ++RT+W++ G NF+ ++LR A ++ E+ VV DQFG Sbjct: 123 INAYGYSKYLGERYLETINPKYFLVRTSWLFGSGGPNFVSTILRAALKKDELRVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AL +A ++++ T G++H+T + G SW +FA+ I + G Sbjct: 183 CPTYALDLACFVLKLVK-------TGAYGVYHVT-NQGITSWYEFAKEIL----RQAGID 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + + +Y A RP S LD L T S+W++ + L Sbjct: 231 IPVVAVSSDEYTRPAKRPKNSALDPFPLKETVESLPSSWQDALSRFL 277 >gi|322385738|ref|ZP_08059382.1| dTDP-4-dehydrorhamnose reductase [Streptococcus cristatus ATCC 51100] gi|321270476|gb|EFX53392.1| dTDP-4-dehydrorhamnose reductase [Streptococcus cristatus ATCC 51100] Length = 284 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVIGTENVAKAAEAHGATMVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDASEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|291550904|emb|CBL27166.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14] Length = 304 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G GQ+ + + ++ D++ I G D +D+ + Sbjct: 1 MKFFVTGVGGQLGHDVMNELLKRGHEGVGSDIQEIYSGVADGSDVTKAPYVSLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 PD +I+ AA+TAVD AEDE E +INA G IA+ + YIS Sbjct: 61 VEKIITEIHPDAVIHCAAWTAVDLAEDEDKQEKVRAINAGGTQNIAEVCKKLDCKMTYIS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + + PLN+YGK+KL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWEPDCKSYAPLNVYGKTKLEGELAVSETLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K + VV DQ GTPT +AR L++ +++ G +H T +GG Sbjct: 181 IKTMLNVGKNHDTVRVVNDQIGTPTYTYDLARL-------LVDMNESEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ + G ++V + T +Y +KA RP S L+ SKL + Sbjct: 234 YISWYDFTKEIY----RQAGYTTEVLPVTTAEYGLSKAARPFNSRLEKSKLVEAGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALNRYLKEI 302 >gi|320546615|ref|ZP_08040927.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equinus ATCC 9812] gi|320448670|gb|EFW89401.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equinus ATCC 9812] Length = 284 Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 145/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID---EFSPT 118 VD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + P+ E T Sbjct: 63 VDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDG--KKPVGQEWEVDDT 120 Query: 119 -NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRLGEEAVEKYAKNFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLKK-AKATGFVIPTWQEALKEF 277 >gi|307710515|ref|ZP_07646952.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis SK564] gi|307618778|gb|EFN97917.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis SK564] Length = 283 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDG--KKPVGQEWEVDDR 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKNHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAANRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I TW++ ++ Sbjct: 235 IKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQDALK 275 >gi|323351866|ref|ZP_08087517.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis VMC66] gi|322121923|gb|EFX93655.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis VMC66] Length = 284 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+R AWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRAAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|319788850|ref|YP_004090165.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] gi|315450717|gb|ADU24279.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] Length = 304 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 106/307 (34%), Positives = 157/307 (51%), Gaps = 36/307 (11%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQ----DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ L++ ++ D+ + G D +D+ Sbjct: 2 MKVFVTGVNGQLGHDVVNELAARSIEAVGSDITDVYSGAADGSAVTNAEYVKLDITDKNA 61 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE---PEIAFSINAEGAGAIAKAADSIGIPCIYI 98 + + DV+I+ AA+TAVD AEDE P++ +IN +G IA I +YI Sbjct: 62 VETVISNSKCDVVIHCAAWTAVDAAEDEENKPKVK-AINVDGTQNIADICKKINAKMVYI 120 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 STDYVF+G P I + P+N+YG++KL GE VA+ Y I+R AWV+ G N Sbjct: 121 STDYVFNGQGTEPWIPDCKDYAPMNVYGQTKLDGELAVANTLEKYFIVRIAWVFGKNGKN 180 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 F+ +M+ + K E+ VV DQ GTPT +AR ++ ++IE T G +H T +G Sbjct: 181 FIKTMINVGKTHDEVRVVNDQIGTPTYTFDLARLLV----DMIE---TEKYGYYHATNEG 233 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRI 276 G +SW DF + I+ + G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 GYISWYDFTKEIY----KAAGMSTKVIPVTTAEYGLSKAARPFNSRLDKSKLVEAGFKPL 289 Query: 277 STWKEGV 283 TW++ V Sbjct: 290 PTWQDAV 296 >gi|303237033|ref|ZP_07323603.1| dTDP-4-dehydrorhamnose reductase [Prevotella disiens FB035-09AN] gi|302482420|gb|EFL45445.1| dTDP-4-dehydrorhamnose reductase [Prevotella disiens FB035-09AN] Length = 294 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 15/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-----IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NG + ++ + + + + G +D+ ++ + + II Sbjct: 1 MNILVTGANGMLGNTIQVVAKESKDQYLFTDVCEGYQKLDITNLEEVRRTVKENNIECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I +NA +AKA + +++STDYVF G TP E Sbjct: 61 NCAAWTNVDGAETAGDIVEMLNATAPENLAKAMKEVDGLLVHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + Y+I+RTAW+Y FG NF+ +M+ L + E+ V Sbjct: 121 DQKGTPTGVYGLTKLHGEEKIMAVGGKYIIVRTAWLYGEFGKNFVKTMMNLTATKPELKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A+ +A+AI I N +T GI+H + + G SW DFA+ I A Sbjct: 181 VFDQCGTPTYAVDLAKAIFDIVENRKYEENT---GIYHFSNE-GVCSWYDFAKAI----A 232 Query: 235 ERGGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E G S + + ++P+ RPAYS D +K+ T + W + ++ + N+ Sbjct: 233 EFAGNTSCNIQPCHSNEFPSPVTRPAYSVFDKTKIKTTFGTSVPYWIDSLKKCVANL 289 >gi|291547964|emb|CBL21072.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5] Length = 283 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G NGQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 2 LKVWIAGANGQIGRALNDVLDPMQIETLNTDLDELDITDTDEVINFGSINRPDVIINCTG 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D+ E PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TN Sbjct: 62 ITDTDECEKNPEHAYRVNALGARNLSIVARKCGAKIVQLSTDDVFDGKSKKPYTEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L A++ + +SV DQF Sbjct: 122 PLTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVNRVLETAEKGQALSVASDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR I+ + DT+ G +H+T G + +FA I G Sbjct: 182 GSPTSAKDLARMILYLI-------DTNEYGTYHVTC-SGVCNRYEFATEIL----RLAGK 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + T+Q + RP Y+ LD L + WK ++ + Sbjct: 230 EIELRSVPTEQSDLSSVRPPYAVLDNFILRIIEVYDMPDWKASLKEYM 277 >gi|253580788|ref|ZP_04858051.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847858|gb|EES75825.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 313 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 96/246 (39%), Positives = 135/246 (54%), Gaps = 18/246 (7%) Query: 52 DVIINPAAYTAVDKAEDE---PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 D +I+ AA+TAVD AEDE P++ +N G IA + I +Y+STDYVFDG Sbjct: 71 DAVIHCAAWTAVDAAEDEENQPKVRL-VNVTGTQNIADVCKELDIKMLYLSTDYVFDGQG 129 Query: 109 RTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 TP + + PLN+YG++KL GE V+ N + I+R AWV+ G NF+ +M+ L K Sbjct: 130 TTPWEPDCKDYKPLNVYGQTKLDGELAVSGTVNKFFIVRIAWVFGKNGKNFIKTMINLGK 189 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +SVV DQ GTPT +AR +I ++IE T G +H T +GG +SW DF + Sbjct: 190 THDTLSVVNDQIGTPTYTYDLARLLI----DMIE---TEKYGYYHATNEGGYISWYDFTK 242 Query: 228 YIFWESAERGGPY-----SKVYRIFTKQY-PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 IF ++A G P V + T +Y +KA RP S LD SKL + TW++ Sbjct: 243 EIFRQAAAMGHPEYLPENMTVNSVTTAEYGASKAARPFNSRLDKSKLTANGFTPLPTWQD 302 Query: 282 GVRNIL 287 + L Sbjct: 303 ALGRYL 308 >gi|4406252|gb|AAD19916.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] Length = 284 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 150/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLNERNVDYVAVDVTEMDITNSEMVEKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AK ++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKGSEKYGAILVYISTDYVFDG--KKPVGQEWEVDDI 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LA+ + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGRNFVFTMQSLAETHKTLTVVSD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q+G PT +A + + N E G +H++ D +W DFA I ES Sbjct: 181 QYGRPTWTRTLAEFMTYVTENQKE------YGYYHLSNDAAEDTTWYDFASEILKESDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 LLP------VDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|302340707|ref|YP_003805913.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] gi|301637892|gb|ADK83319.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] Length = 293 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 94/247 (38%), Positives = 133/247 (53%), Gaps = 13/247 (5%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----D 105 S D IIN YTAVDKAEDEPE A +N G + AA+ IG I++STDYVF D Sbjct: 50 SIDWIINCVGYTAVDKAEDEPEAAEKLNVLGPRYLGMAAEEIGARIIHVSTDYVFGSTGD 109 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 + R P++E PT P +YG++KLAGE + T I+RTAW+Y +G NF+ SML+L Sbjct: 110 SIDR-PLEERDPTAPECVYGRTKLAGEFAIKKATRRAFIIRTAWLYGTWGKNFVFSMLQL 168 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 KER + VV DQ G PT + +A +++I NSD G++H GG SW +F Sbjct: 169 FKERSMVKVVRDQIGCPTWSRVMAEFLVEIIER---NSDNY--GVYHFCG-GGQASWYEF 222 Query: 226 AEYIFWESAERGGPYSKVY--RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + I + E G +V + ++ ++A RP +S L I+ W+E + Sbjct: 223 SLEIARLAQELGIQKKRVLIEPCTSDEFASRAKRPKWSVLSTVATEAAFGIKTKPWQESL 282 Query: 284 RNILVNI 290 + I Sbjct: 283 GEFMSMI 289 >gi|23098583|ref|NP_692049.1| spore coat polysaccharide synthesis [Oceanobacillus iheyensis HTE831] gi|22776809|dbj|BAC13084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Oceanobacillus iheyensis HTE831] Length = 282 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 146/287 (50%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ ++ S + I R+ + ++D+ P SF PD +I+ AAY Sbjct: 5 MRFLITGCEGQLGKAFISKLGLGINIKRLSKKEMDITDPIKIEQQIQSFQPDYVIHTAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD +E P +A +NA G +A+A G ++ S+DYVFDG TP E NP Sbjct: 65 TAVDLSEKHPILALQVNAIGTLHLARACKKYGAKLVFFSSDYVFDGEKNTPYIESDRPNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK EE + I+RT+W++ +NF+ ++ + A +R+ + V+ DQ G Sbjct: 125 KNNYGLSKWLAEEFILQTLPESYIIRTSWLFGDGENNFVNTIKKNAYKRKPLKVINDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A I + GI+H+ D G SW FA+ I+ E G Sbjct: 185 SPTYTYDLVEACIPLLQLPF--------GIYHIRND-GICSWYSFAQTIY---EECGTDP 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + +K+Y T A RP+YS L +KL ++ WKE + N + Sbjct: 233 TLITPVTSKEYKTLAKRPSYSVLSMNKLKSSGTKLPRFWKEALCNFI 279 >gi|256843713|ref|ZP_05549201.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus 125-2-CHN] gi|256615133|gb|EEU20334.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus 125-2-CHN] Length = 328 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 154/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------------DVEIIRVGRPDIDLLKPKD 41 MK V G NGQ+ + + + + ++ +D+ Sbjct: 1 MKAFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYNGVMDGTAVTKMPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVII+ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VNKVITEVNPDVIIHCAAWTAVDMAEDDDKVEAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + +F PLN+YG++KL GE+ VA + Y I+R AWV+ I G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGINGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSTHDEVKVVDDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ +++ +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQASYD----TKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLVENGFKPLPTWPDAVSRYL 314 >gi|324993209|gb|EGC25129.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK405] gi|324995489|gb|EGC27401.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK678] gi|327461478|gb|EGF07809.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1] Length = 284 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 151/290 (52%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNTQVVDNVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTYKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT + + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLTEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VQP------VDSSKFPAKAKRPFNSTMSLTK-AKATGFVIPTWQDALKEF 277 >gi|293364793|ref|ZP_06611510.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|307703042|ref|ZP_07639989.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|291316243|gb|EFE56679.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|307623435|gb|EFO02425.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] Length = 284 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +V+ + V ++D+ + F +P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNVDYVAVDVVEMDITNAEMVEKVFAEVNPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVRQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PSPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------YGYYHLSNDSTEDTTWYDFAVEILKDSDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VVP------VDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|163748305|ref|ZP_02155587.1| dTDP-4-dehydrorhamnose reductase [Oceanibulbus indolifex HEL-45] gi|161378424|gb|EDQ02911.1| dTDP-4-dehydrorhamnose reductase [Oceanibulbus indolifex HEL-45] Length = 238 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 93/231 (40%), Positives = 131/231 (56%), Gaps = 9/231 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G+ GQ+A +L D + R DL P+ A+ + P +IN AAY Sbjct: 1 MSLLVFGSTGQLAVALRKHS-DDARFL--DRAAADLAHPEACAAVIRATRPSAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A INAE GA+A+A + IP +++STDYVF+G ++P P P Sbjct: 58 TAVDRAEEEEVLATRINAEAPGAMARACAELEIPFLHVSTDYVFNGSGQSPWRPDDPIAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG+SK AGE V + ++ ILRT+WV+S G NF+ +ML+L++ R + VV DQ G Sbjct: 118 INAYGRSKAAGEAAVRAAGGSHAILRTSWVFSAPGKNFVTTMLQLSEHRDALKVVDDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIF 230 PT AL IA ++Q+A + G +H G P SW FA F Sbjct: 178 GPTPALSIAETLLQMAGAMKAG---QAGGTYHYA--GAPATSWTCFARETF 223 >gi|313115158|ref|ZP_07800643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622524|gb|EFQ05994.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii KLE1255] Length = 305 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 146/298 (48%), Gaps = 23/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + + +I V PD+D+ K F Sbjct: 1 MKIIVTGCKGQLGTEILKQLREGRSEIGPVPEKLLNATVIAVDLPDLDISNYKMVDEFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RNRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 + DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGVAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A+ +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAVDLAHEILQLCV-------THEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A I S + ++P A RP +S LD L T + WK+ + Sbjct: 233 ASEIIRLSGVDAAVAPCTSEEYKAKHPESADRPKWSALDNRMLRCTVGNDVRDWKDAL 290 >gi|325854328|ref|ZP_08171527.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola CRIS 18C-A] gi|325484122|gb|EGC87056.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola CRIS 18C-A] Length = 293 Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 149/293 (50%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L S +D I + G +D+ +D + + II Sbjct: 1 MNILVTGANGQLGNEIQLVSRHSKDRYIFTDVCEGYAKLDITNLEDIRRMVHENNVECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE I ++NA +A+A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGAIVETLNAIAPENLARAMKEVNGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L R ++ V Sbjct: 121 DMRGTPTGVYGLTKLHGEEKIRATGVKHIILRTAWLYSEFGHNFVKTMMNLTATRPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N ++ GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAEAIYDIVENRKYEGNS---GIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + Sbjct: 234 LAGNTACDIQPCHSDEFPSPVKRPAYSVLDKTKIKETFGIKIPYWVDSLKKCM 286 >gi|166031256|ref|ZP_02234085.1| hypothetical protein DORFOR_00943 [Dorea formicigenerans ATCC 27755] gi|166029103|gb|EDR47860.1| hypothetical protein DORFOR_00943 [Dorea formicigenerans ATCC 27755] Length = 316 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 154/315 (48%), Gaps = 35/315 (11%) Query: 1 MKCLVIGNNGQIA------------QSLSSMCVQDVEIIRVGRP-------DIDLLKPKD 41 MK LV G GQ+ + + S + I+ G P +D+ Sbjct: 1 MKVLVTGVAGQLGHDVMNELAKRGYEGIGSDIAESYNGIQDGTPVVSMPYVQMDITDKAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 + D +I+ AA+TAVD AEDE + ++NAEG IA+ + +Y S Sbjct: 61 VEKVLTEVNADAVIHCAAWTAVDLAEDEDKKDKVHAVNAEGTKNIAEVCKKLDSKMVYTS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G P + PLN+YG+SKL GE V+ + Y I+R AWV+ G+NF Sbjct: 121 TDYVFNGQGEEPWQPDCKDYQPLNVYGQSKLDGELAVSETLDKYFIVRIAWVFGKNGNNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ K ++ VV DQ GTPT +AR ++ ++IE T G +H T +GG Sbjct: 181 IKTMLKVGKNHDKLRVVNDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRI-----FTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ E+G RI T +Y +KA RP S LD KL Sbjct: 234 YISWYDFTKEIFRQAVEQGHTEYGEDRITVNPVTTAEYGVSKAARPFNSRLDKKKLVENG 293 Query: 273 NIRISTWKEGVRNIL 287 + TW++ + L Sbjct: 294 FTPLPTWQDALGRYL 308 >gi|28849790|gb|AAN64547.1| dTDP-L-rhamnose synthase [Streptococcus gordonii] Length = 283 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEMVEKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAXNQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTNVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I +W++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPSWQDALK 275 >gi|327313602|ref|YP_004329039.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola F0289] gi|326946109|gb|AEA21994.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola F0289] Length = 293 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 149/293 (50%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L S +D I + G +D+ +D + + II Sbjct: 1 MNILVTGANGQLGNEIQLVSRHSRDRYIFTDVCDGYAKLDITNLEDIRRMVHENNVECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE I ++NA +A+A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGAIVETLNAVAPENLARAMKEVNGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L R ++ V Sbjct: 121 DMRGTPTGVYGLTKLHGEEKIRATDVKHIILRTAWLYSEFGHNFVKTMMNLTATRPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N ++ GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAEAIYDIVENRKYEGNS---GIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + Sbjct: 234 LAGNTACDIQPCHSDEFPSPVKRPAYSVLDKTKIKETFGIKIPYWVDSLKKCM 286 >gi|222152856|ref|YP_002562033.1| dTDP-4-dehydrorhamnose reductase [Streptococcus uberis 0140J] gi|222113669|emb|CAR41597.1| dTDP-4-dehydrorhamnose reductase [Streptococcus uberis 0140J] Length = 284 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/286 (34%), Positives = 150/286 (52%), Gaps = 20/286 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + +VE + V ++D+ P F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERNVEYVAVDVAEMDITNPDMVDEVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE + + +IN +G IAKA +YISTDYVFDG ++T E+ T+ Sbjct: 63 VDAAEDEGKALNQAINVDGTVNIAKACQKYNATLVYISTDYVFDG-TKTVGQEWLETDIP 121 Query: 120 -PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GEE V Y + + I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYVDQFYIIRTAWVFGHYGKNFVFTMQNLAKTHPKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT R + + +L EN G +H++ D SW DFA+ I ++ Sbjct: 182 YGRPT----WTRTLAEFMCHLTENQKD--YGYYHLSNDSKEDTSWYDFAKEILKDTDVEV 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + +P KA RP S ++ K A I TW+E + Sbjct: 236 VP------VDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEAL 274 >gi|239993212|ref|ZP_04713736.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii ATCC 27126] Length = 289 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 98/268 (36%), Positives = 141/268 (52%), Gaps = 12/268 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M ++IG +GQ+A LS + + ++ +GR DID+ + S +V+IN +A Sbjct: 1 MNIVIIGKSGQLAFELSRELENSEHQVSFLGRDDIDITSASNIEETLSPLSAEVVINASA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE++ E +IN +A + G +++STDYVF+G +P Sbjct: 61 YTAVDKAEEDTEACNAINTLAVKNLANFCKANGAFMVHVSTDYVFNGHKGSPYLTDDTIE 120 Query: 120 PLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YGKSK GE+ + + ++RTAWVYS G+NF+ +MLRL ++ ++ V+ DQ Sbjct: 121 PQGAYGKSKAEGEKALLEILPDASCLIRTAWVYSSHGNNFVKTMLRLMADKPQLGVIDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 GTPT A +A + A N G++H T D G SW DFA I E+G Sbjct: 181 IGTPTWAKGLAEVCVTAALN-------KTSGVYHWT-DEGVASWYDFALAIQELGVEKGL 232 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLD 264 V I + QYPT A RP YS LD Sbjct: 233 LDKSVPVLPIPSSQYPTPAKRPHYSVLD 260 >gi|150020962|ref|YP_001306316.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429] gi|149793483|gb|ABR30931.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429] Length = 285 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 150/295 (50%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII----RVGRPDIDLLKPKDFASFFLSFSPDVII 55 M+ L+ G GQ+ Q + ++ +E I + G +D+ F PDVII Sbjct: 1 MRILITGAYGQLGQDFQKLFDKEGIEYIATDNKEGYKKLDITNLDKVIEFAKKIKPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAY AVDKAE+E ++A++IN +A AA ++ STDYVFDG P + Sbjct: 61 NCAAYNAVDKAEEEWKVAYNINGLSVRNLAIAASLNNSFLVHYSTDYVFDGRKGMPYTIY 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NPL+ YG+SK GE+ ++ + +NY ++RT+WV+ NF ++ +K+ +IS+V Sbjct: 121 DTPNPLSKYGESKYLGEKLLSQFYDNYALIRTSWVFGKGNINFAKKVIEWSKKYEKISLV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D+ PT + +A+A +I +RG++H++ + S ++ YI E Sbjct: 181 IDEISAPTYTVDLAKATWEIIK-------YRVRGLYHISNE-RECSRYEYGRYIL----E 228 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R G K+ + + K + A RP YS LD L T ++ WKE V L I Sbjct: 229 RIGYKGKIEKAYQKDFNLPAKRPKYSKLDNFGLCETVGFKMPDWKEAVDRFLKEI 283 >gi|253578778|ref|ZP_04856049.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849721|gb|EES77680.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 304 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 92/245 (37%), Positives = 133/245 (54%), Gaps = 15/245 (6%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD +I+ AA+TAVD AED+ ++A +INA G IA + YISTDYVFDG Sbjct: 69 NPDAVIHCAAWTAVDMAEDDDKVAKVRAINAGGTQNIADVCKKLNCKMTYISTDYVFDGQ 128 Query: 108 SRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P + PLN+YG++KL GE V+ Y I+R AWV+ + G NF+ +ML + Sbjct: 129 GTEPWQPDCKDYKPLNVYGQTKLEGELAVSQTLEKYFIVRIAWVFGLNGKNFIKTMLNVG 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K + VV DQ GTPT +AR L++ ++T G +H T +GG +SW DF Sbjct: 189 KTHDTVRVVNDQIGTPTYTYDLARL-------LVDMNETEKYGYYHATNEGGYISWYDFT 241 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + I+ + G + V + T++Y +KA RP S LD SKL + TW++ + Sbjct: 242 KEIY----HQAGYKTAVLPVSTEEYGLSKAARPFNSRLDKSKLVEAGFTPLPTWQDALSR 297 Query: 286 ILVNI 290 L I Sbjct: 298 YLKEI 302 >gi|295109349|emb|CBL23302.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum A2-162] Length = 283 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G GQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 2 LKVWIAGAGGQIGRALNDVLDPMQIEALNTDVNELDITDTDEVINFGTVNRPDVIINCTG 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D+ E+ PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TN Sbjct: 62 ITDTDECEENPEHAYRVNALGARNLSIVARKCGSKIVQLSTDDVFDGQSKKPYTEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L + R +SV DQF Sbjct: 122 PLTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGHGGNNFVNRVLEATESGRTLSVASDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR I+ + T+ G +H+T G + +FA+ I G Sbjct: 182 GSPTSAKDLARMILYLI-------STNEYGTYHVTC-SGICNRYEFAQEIL----RLAGK 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + T+Q + RP Y+ LD L + WKE ++ + Sbjct: 230 TIELKSVPTEQSDLSSVRPPYAVLDNFILRIIEMYDMPEWKESLKEYM 277 >gi|332286407|ref|YP_004418318.1| dTDP-4-dehydrorhamnose reductase [Pusillimonas sp. T7-7] gi|330430360|gb|AEC21694.1| dTDP-4-dehydrorhamnose reductase [Pusillimonas sp. T7-7] Length = 307 Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 103/289 (35%), Positives = 152/289 (52%), Gaps = 27/289 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ + L C ++ + R +D+ + + PD IIN AAY Sbjct: 1 MKVLLTGADGQLGRCLQDRCPAHWRLLALNRSRLDITDSQAVSRRVALEQPDWIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + E AFS+N +GA +A+AA G +++STDYVFDG R P E P Sbjct: 61 TAVDQAEGDAEQAFSVNVKGAAHLAEAAGRAGARLLHVSTDYVFDGQLRRPYTEQDAARP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER-REIS------ 173 LN YG+SKL GE V + ++LRT+ VYS +G+NF+ +MLRLA +E++ Sbjct: 121 LNEYGRSKLLGERAVLQSLSQALVLRTSGVYSEYGNNFVKTMLRLAAAAGKEVAPTKPEN 180 Query: 174 ------------VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 +V DQ PT A +A A+I +L+ S + G++H +S Sbjct: 181 AAGQPSNAAVLRIVADQHICPTYAGDLADAVI----DLMACSPPA-SGLYHYCG-AMQLS 234 Query: 222 WADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKL 268 W +FA++IF + + +S + I Y A RPAYS L C K+ Sbjct: 235 WHEFAQHIFDCAQRQDASFSMPPLQAISASDYSAPAQRPAYSVLACEKI 283 >gi|147921183|ref|YP_685006.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] gi|110620402|emb|CAJ35680.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] Length = 264 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 28/287 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K +++G G + L + + + + D+D+ + +PD +IN AAY Sbjct: 5 IKTVIVGAGGMLGTDLRAAFP---DALAITHKDMDITDREAVMRAIRKAAPDAVINAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD EDE E A++IN G +A+A +G ++ STDYVFDG SR E TNP Sbjct: 62 TNVDGCEDEQEKAYAINGLGPAYLAEACKEVGATLVHYSTDYVFDG-SRPEYRESDATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKLAGE+ V ++Y I+RT+W++ G NF+ ++L L+K+ + VV DQ G Sbjct: 121 ISVYGKSKLAGEKNVQYNMDDYRIVRTSWLFGRHGKNFVDTILSLSKQMPTVKVVNDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A ++ T GI+H++ + G SW +FA F ++A Sbjct: 181 KPTYTVDLAEKTKELI--------TLPAGIYHISNE-GVCSWFEFAS-AFIDNA------ 224 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 T ++P KA RP YS L NT + WK+ +R+ L Sbjct: 225 ---VPCTTAEFPRKAKRPRYSV-----LVNTKTSPLRHWKDALRDYL 263 >gi|262282412|ref|ZP_06060180.1| dTDP-L-rhamnose synthase [Streptococcus sp. 2_1_36FAA] gi|262261703|gb|EEY80401.1| dTDP-L-rhamnose synthase [Streptococcus sp. 2_1_36FAA] Length = 283 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 150/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEMVEEVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + P+ E Sbjct: 63 VDAAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDG--QKPVGEEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAGNQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTNVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + Q+P KA RP S + +K A I +W++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLNK-AKATGFVIPSWQDALK 275 >gi|225568040|ref|ZP_03777065.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM 15053] gi|225163136|gb|EEG75755.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM 15053] Length = 286 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 94/265 (35%), Positives = 146/265 (55%), Gaps = 14/265 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K ++G GQ+ +++ + D E+ + ++D+ + SF PDVIIN AA Sbjct: 2 LKVWIVGAGGQLGTAINDVLDPLDAEVFNTDKEELDITHTDEVISFGEINRPDVIINCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T E++PE+A+ +NA GA ++ A G + +STD VFDGLS TP EF TN Sbjct: 62 VTDTALCEEQPELAYRVNALGARNLSIVARKTGAKIVQLSTDDVFDGLSTTPYSEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SK AGE V +T+ + I+R+ WVY G NF+ S+L A ++++SV DQF Sbjct: 122 PRTVYGRSKRAGENYVKEFTHKHFIVRSNWVYGK-GDNFVNSVLEKAGSQKQLSVAADQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA + R I+ + T+ G +H T G S +FAE I + A+R Sbjct: 181 GSPTSARDLGRLILYLIG-------TNEYGTYHATCK-GTCSRYEFAEEIL-KLADRN-- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLD 264 ++ + ++ + RPAY+ LD Sbjct: 230 -IELKPVPARESELASVRPAYAVLD 253 >gi|154151292|ref|YP_001404910.1| dTDP-4-dehydrorhamnose reductase [Candidatus Methanoregula boonei 6A8] gi|153999844|gb|ABS56267.1| dTDP-4-dehydrorhamnose reductase [Methanoregula boonei 6A8] Length = 283 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 154/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NGQ+ Q + +C Q+ ++ I G ++++ + F DVIIN AA Sbjct: 1 MRVLITGVNGQLGQDIRKVCEQNSIDHIATGSKELNISNVSEVQHFVKKNPVDVIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE E + A+ +N G +A AA+S+G ++ STDYVFDG SR P Sbjct: 61 YNAVDLAETEWKKAYRVNGLGVRNLATAANSLGAVFVHFSTDYVFDGKSRLPYTIADLPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG SKL GE + ++++RT+WV+ NF ++ +K + E+ VV DQ Sbjct: 121 PISRYGMSKLLGETMTRDIADTFILIRTSWVFGKGNDNFPKKIMGWSKNKTELKVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A+A + + +++N+ RG++H+T + G S ++AE++ + +G Sbjct: 181 ASPTYTADLAKATLDL---ILKNA----RGMYHIT-NSGYCSRYEWAEFLLAKVGWKG-- 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R + ++ + A RPAYS LD + WK+ L ++ Sbjct: 231 --NLVRGSSDEFMSAAQRPAYSVLDNFGTPECLGYSLPDWKDATERFLQDL 279 >gi|46445759|ref|YP_007124.1| putative dTDP-4-keto-L-rhamnose reductase, (TDP-rhamnose synthetase), rfbD [Candidatus Protochlamydia amoebophila UWE25] gi|46399400|emb|CAF22849.1| putative dTDP-4-keto-L-rhamnose reductase, (TDP-rhamnose synthetase), rfbD [Candidatus Protochlamydia amoebophila UWE25] Length = 294 Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 89/241 (36%), Positives = 130/241 (53%), Gaps = 20/241 (8%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AAYT VDKAE + + A+ +NA G + AA I+ STDYVFDG P Sbjct: 56 IINCAAYTKVDKAETDLKQAYLVNACGPHHLGIAARHQNAHVIHFSTDYVFDGKENLPYT 115 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E P+ YG SKLAGE K+ + ++RT+W++ + G NF+ +MLRL E+ +I Sbjct: 116 EEHACAPIGAYGISKLAGEIKLLDEFDRSCVIRTSWLFGLPGKNFVETMLRLMNEKAQIK 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +VCDQ G PT A +A +Q D S GI+H A+ +W +FA+ I+ Sbjct: 176 IVCDQMGRPTYAQDLAEVALQFL-------DKS--GIYHF-ANSSETNWYEFAKEIY--- 222 Query: 234 AERGGPYSKVYR------IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G + + R I T +YPT+A RPAYS L+ K+ + + W+E +++ L Sbjct: 223 -RQGKEFQLIQRDCQIEPIMTHEYPTQAKRPAYSTLNTQKIESVLRWKPRPWQEALKDYL 281 Query: 288 V 288 Sbjct: 282 T 282 >gi|229819705|ref|YP_002881231.1| dTDP-4-dehydrorhamnose reductase [Beutenbergia cavernae DSM 12333] gi|229565618|gb|ACQ79469.1| dTDP-4-dehydrorhamnose reductase [Beutenbergia cavernae DSM 12333] Length = 284 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 97/285 (34%), Positives = 140/285 (49%), Gaps = 11/285 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G G +A + + + E++ R D+D+ D ++ D +IN AA+ Sbjct: 1 MRILVTGAGGMLAHDVVARLDAEHEVLPRARRDLDVTD-ADAVRRAVAPGTDAVINCAAW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE AF +NA +A+A ++G + +STDYVFDG + P E +P P Sbjct: 60 TAVDDAESHEGAAFDLNALAPAHLAQACTAVGARLVQVSTDYVFDGAAALPYGEDAPLRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K AGE V + +++++RTAW+Y G+ F +M RLA ER I VV DQ G Sbjct: 120 VSAYGRTKAAGEWAVRAAGADHLVVRTAWLYGAHGACFPRTMARLAAERERIDVVDDQLG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + L+E G +H TA G VSW F I A G Sbjct: 180 QPTWTADVA----DVVARLLERGAPG--GTYHATAS-GEVSWYGFTREIV---ASLGRDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + V + + A RPAYS L L I W+E R Sbjct: 230 AMVRPTTSAAFSRPAPRPAYSVLGHEALVRAGLAPIGDWRERWRE 274 >gi|299140997|ref|ZP_07034135.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris C735] gi|298577963|gb|EFI49831.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris C735] Length = 290 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 146/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L + D I + G +D+ F II Sbjct: 1 MNILVTGANGQLGNEIQLVAKASHDHYIFTDVCEGYQKLDITNLNAIQEMVKQFDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAESAGEIVETLNATAPENLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLHGEQKIQATGVKHIIIRTAWLYSEFGKNFVKTMLSLTAAKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I+ I N + + GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVILDIIENRKFDGN---EGIYHFSNE-GVCSWFDFTKEI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + Sbjct: 234 LAGHTNCDILPCHSNEFPSPVTRPAYSVLDKTKIKETFGIKIPYWTDSLKKCM 286 >gi|257440888|ref|ZP_05616643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii A2-165] gi|257196668|gb|EEU94952.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii A2-165] Length = 306 Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 146/298 (48%), Gaps = 23/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC-------------VQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + + +I V P++D+ K F Sbjct: 1 MKIIVTGCKGQLGTEIIKQLREGRSEIGPIPEKLMNATVIPVDLPELDISNYKMVDDFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RQRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 I DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ++ ++ VV DQ G PT+A + +AH L++ T G++H T + G SW DF Sbjct: 181 GRKFGKLEVVNDQCGNPTNA-------VDLAHELLQLCVTHEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A I S + ++P A RP +S LD L T + WKE + Sbjct: 233 ASEIIRLSGVDASVAPCTSEEYKAKHPESADRPKWSALDNRMLRCTVGNDVRDWKEAL 290 >gi|229489527|ref|ZP_04383390.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121] gi|229323624|gb|EEN89382.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121] Length = 279 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 152/285 (53%), Gaps = 12/285 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ + ++ + VG ++D+ + F S V+IN AAYTA Sbjct: 5 LLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFVSPGS--VLINCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + E A ++N G +A+A +G I++STDYVF G + +P D +PT P Sbjct: 63 VDAAETDQEAARAVNEIGPRNLAQACARVGSRLIHVSTDYVFPGDASSPYDVDAPTGPAT 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE V + ++RTAWVYS G++F+ +M RL ER ++VV DQ G+P Sbjct: 123 VYGRTKLDGEIAVRESGADAAVVRTAWVYSGVGTDFVATMRRLEAEREFVNVVDDQIGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T ++ +A I+++A L++ + S FH+T +GG SW + A +F E G ++ Sbjct: 183 TYSVDLAGGIVELA--LLDFTGAS---TFHVT-NGGQASWYELARAVF---EEIGADPAR 233 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + ++ A RPAYS L + W+E + L Sbjct: 234 VRPCSSAEFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAAL 278 >gi|327184174|gb|AEA32621.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1118] Length = 328 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 154/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVE------------------IIRVGRPDIDLLKPKD 41 MK V G NGQ+ ++ + + E + ++ +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGVEDGSAVTKMPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VDKVITEVNPDVIVHCAAWTAVDMAEDDDKVEAVRMVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + +F PLN+YG++KL GE+ VA + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVDDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIY----RQAGYDTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + V L Sbjct: 290 LDKSKLVKNGFKPLPVWTDAVHRYL 314 >gi|325286260|ref|YP_004262050.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga lytica DSM 7489] gi|324321714|gb|ADY29179.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga lytica DSM 7489] Length = 259 Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/267 (35%), Positives = 135/267 (50%), Gaps = 12/267 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K LV G NGQ+ Q + + ++E ++D+ + FF + D IN A Sbjct: 2 IKILVTGANGQLGQCIQVLKNAYSNLEFTFCNSDELDITNEERLRFFFQEYKFDYCINCA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT V+ AE P A+ +N +G IA+ + ++ISTDYVFDG +P T Sbjct: 62 AYTNVELAEKTPNKAYLVNGQGVKNIAEECRKHSVTLVHISTDYVFDGEKGSPYTISDST 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+N YGKSKL GE+ + Y I+RT+W+YS FG NF ++L A + +SV+ + Sbjct: 122 NPINEYGKSKLMGEKYIKEILEEYFIIRTSWLYSEFGHNFYKTILNKAIKGENLSVIDTE 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A+ II I SD GI H T DG P++W DF + I Sbjct: 182 IGCPTDANNLAKYIIDIII-----SDNKDFGIKHFT-DGIPMTWFDFTKEIL--KKNELD 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDC 265 +K+ R Y + A RP S L C Sbjct: 234 KTTKLVR--ANNYRSFAKRPKNSTLLC 258 >gi|315039054|ref|YP_004032622.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1112] gi|312277187|gb|ADQ59827.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1112] Length = 328 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 154/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPD-----------IDLLKPKD 41 MK V G NGQ+ + + + D++ G D +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLKPEYAGVADGSAVTKMPYVPLDITDGDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VEKVITDVNPDVIVHCAAWTAVDMAEDDDKVEAVRMVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + +F PLN+YG++KL GE+ VA + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT---- 214 + +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVDDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSEL 233 Query: 215 -----------ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ + G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIY----RQAGYDTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + V L Sbjct: 290 LDKSKLVENGFKPLPLWTDAVSRYL 314 >gi|163814427|ref|ZP_02205816.1| hypothetical protein COPEUT_00578 [Coprococcus eutactus ATCC 27759] gi|158450062|gb|EDP27057.1| hypothetical protein COPEUT_00578 [Coprococcus eutactus ATCC 27759] Length = 304 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/245 (37%), Positives = 132/245 (53%), Gaps = 15/245 (6%) Query: 50 SPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD +I+ AA+TAVD AED+ ++ +INA G IA + YISTDYVFDG Sbjct: 69 NPDAVIHCAAWTAVDMAEDDDKVEKVRAINAGGTQNIADVCKELDCKMTYISTDYVFDGQ 128 Query: 108 SRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P + PLN+YG++KL GE V+ Y I+R AWV+ + G NF+ +ML + Sbjct: 129 GTEPWQPDCKDYKPLNVYGRTKLEGELAVSQTLEKYFIVRIAWVFGLNGKNFIKTMLNVG 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K I VV DQ GTPT +AR L++ ++T G +H T +GG +SW DF Sbjct: 189 KTHDTIRVVNDQIGTPTYTYDLARL-------LVDMNETEKYGYYHATNEGGYISWYDFT 241 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + I+ + G ++V + T +Y +KA RP S LD SKL + TW++ + Sbjct: 242 KEIY----RQAGYKTEVLPVTTAEYGLSKAARPFNSRLDKSKLVEAGFTPLPTWQDALSR 297 Query: 286 ILVNI 290 L I Sbjct: 298 YLKEI 302 >gi|331000821|ref|ZP_08324467.1| dTDP-4-dehydrorhamnose reductase [Parasutterella excrementihominis YIT 11859] gi|329570349|gb|EGG52082.1| dTDP-4-dehydrorhamnose reductase [Parasutterella excrementihominis YIT 11859] Length = 280 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 150/289 (51%), Gaps = 15/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK + G +G + L+S + +++ GR D+D+ +F PD +IN AA+ Sbjct: 1 MKIWITGASGMLGTELASK-LSSHDLLLTGRSDLDISNENAVLNFCKQNKPDTVINSAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN- 119 T VD E E ++A+ +NA G +A A ++G I ISTDYVF+G S P EF N Sbjct: 60 TNVDACETEKDLAWMVNAWGCRNLALACSTVGSRLISISTDYVFEGDSSRPYHEFDVANG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-KERREISVVCDQ 178 +YG++K AGE+ + N++I+R AW+Y G NF+ +ML LA K EI VV DQ Sbjct: 120 GKTVYGQTKFAGEQFIRQLCPNHLIVRIAWLYGNNGKNFVDTMLSLAEKNLSEIKVVNDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTS A+ + +L+ T +G+ H T +G +W DFA+ IF E G Sbjct: 180 IGNPTS----TSAVTYLIKDLLR---TDYKGVVHGTCEGS-ATWYDFAKTIF----ELSG 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV +K++ A RP+ S L+ + + WKE + L Sbjct: 228 LHQKVVPCTSKEFVRPAPRPSNSRLEKRVIQMLGLAPMPEWKEELAKYL 276 >gi|77406977|ref|ZP_00783994.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae H36B] gi|77174418|gb|EAO77270.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae H36B] Length = 284 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 144/290 (49%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGSELRHLLEERTQEYVAVDVAEMDITNAEIVDKVFEEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ F+IN G +AKAA +YISTDYVFDG +D+ Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP- 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 122 -NPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLEK-AKATGFVIPTWQDALKEF 277 >gi|171779806|ref|ZP_02920762.1| hypothetical protein STRINF_01643 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281908|gb|EDT47342.1| hypothetical protein STRINF_01643 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 284 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 144/290 (49%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID---EFSPT 118 VD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + P+ E T Sbjct: 63 VDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDG--KKPVGQEWEVDDT 120 Query: 119 -NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y + I+RTAWV+ +G NF+ +M LAK ++VV D Sbjct: 121 PDPQTEYGRTKRLGEEAVEKYAEKFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDADEDTTWYDFAVEILKDTDVV 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW+E ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLKK-AKATGFVIPTWQEALQEF 277 >gi|282860056|ref|ZP_06269137.1| dTDP-4-dehydrorhamnose reductase [Prevotella bivia JCVIHMP010] gi|282587144|gb|EFB92368.1| dTDP-4-dehydrorhamnose reductase [Prevotella bivia JCVIHMP010] Length = 290 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-----IIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + Q + + G +D+ S I+ Sbjct: 1 MNILVTGANGQLGNEMQLVAKQSKDNYIFTDVCDGYTKLDITNLDTVRSIVKQNDIKCIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I ++NA +AKA + I+ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAEIAGDIVETLNATAPENLAKAMKEVDGLLIHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + NY+I+RTAW+YS FG NF+ +M+ L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLHGEQKIQAVGGNYIIIRTAWLYSEFGKNFVKTMINLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N ++ GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLADTIFTILENRKFEGNS---GIYHFSNE-GVCSWFDFTVKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G ++ + ++P+ RP+YS LD +K+ NT I+I W ++ + Sbjct: 234 LAGNTTCEILPCHSCEFPSPVTRPSYSVLDKTKIKNTFGIKIPYWTNSLKKCI 286 >gi|291459803|ref|ZP_06599193.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417593|gb|EFE91312.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sp. oral taxon 078 str. F0262] Length = 315 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 95/246 (38%), Positives = 139/246 (56%), Gaps = 15/246 (6%) Query: 49 FSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 SPD +++ AA+TAVD AED + E INAEG +A+AA G +Y+STDYVFDG Sbjct: 78 LSPDAVVHCAAWTAVDDAEDADKVEKVMRINAEGTRFLAEAAKKAGAKFLYLSTDYVFDG 137 Query: 107 LSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P + + PLN+YGKSKL GE V+ Y I+RTAWV+ + G NF+ ++L + Sbjct: 138 RGERPWEPDEKDYAPLNVYGKSKLEGELAVSEILEKYFIVRTAWVFGLNGKNFIRTILNV 197 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + + VV DQ GTPT L +AR ++ ++IE+ G +H T +GG +SW DF Sbjct: 198 GRTHESVRVVSDQVGTPTYTLDLARLLV----DMIESEKY---GYYHATNEGGYISWYDF 250 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A+ I+ + G +K+ + T +Y +KA RP S LD SKL + W++ + Sbjct: 251 AKEIY----RQAGLSTKLIPVTTAEYGLSKAARPFNSRLDKSKLLEQGFQPLPDWRDALS 306 Query: 285 NILVNI 290 L + Sbjct: 307 RYLSEL 312 >gi|325300032|ref|YP_004259949.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salanitronis DSM 18170] gi|324319585|gb|ADY37476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salanitronis DSM 18170] Length = 301 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 146/297 (49%), Gaps = 17/297 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD---------VEIIRVGRPDIDLLKPKDFASFFLSFSP 51 M LV G NGQ+ + + VE V +D+ + S Sbjct: 1 MNILVTGANGQLGNEMRIISKDTDDTYTFTDVVEAEGVETVLLDITDAEAVRSIVREKGI 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 I+N AAYT VDKAE + + ++NAE +A A + ISTDYVF G T Sbjct: 61 RCIVNCAAYTNVDKAETDEALCHTLNAEAPKILALAMKEANGLLVQISTDYVFGGDPYNT 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E P +YGK+KL GE V +YVI+RTAW+YS FG NF+ +ML L + Sbjct: 121 PCREDQKGTPTGVYGKTKLEGERNVQEAGCDYVIIRTAWLYSEFGKNFVKTMLGLTASKP 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLI-ENSDT--SLRGIFHMTADGGPVSWADFAE 227 +++VV DQ GTPT A +ARAI + + EN + S RGI+H + + G SW DF + Sbjct: 181 QLNVVFDQAGTPTYAYDLARAIQTVLADYAGENPENGYSKRGIYHFSNE-GVCSWYDFTK 239 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I + G + + ++P+ RPAYS LD +K+ + + W + ++ Sbjct: 240 KI---AELAGNTECDIRPCHSDEFPSPVKRPAYSVLDKTKIKQVFGVEVPYWTDSLK 293 >gi|269837687|ref|YP_003319915.1| dTDP-4-dehydrorhamnose reductase [Sphaerobacter thermophilus DSM 20745] gi|269786950|gb|ACZ39093.1| dTDP-4-dehydrorhamnose reductase [Sphaerobacter thermophilus DSM 20745] Length = 283 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 145/293 (49%), Gaps = 25/293 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+ ++L + I+ G D+ F PDVI++ A Sbjct: 1 MRILVTGGTGQVGRALQRLAPPGYSIVAPGSDRCDVTDFDAFIRLVADEQPDVIVHAGAM 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E +PE AF INA G +A AA G +Y+ST+YVFDG + P EF+ P Sbjct: 61 TDVDGCERDPERAFRINATGTQHVAAAAQQFGAALVYLSTNYVFDGEAAEPYHEFAERRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGEE V + + I+RTA VY G NF+ +MLR A ER ++VV DQ G Sbjct: 121 INVYGRSKLAGEEAVRAIAPRHYIVRTAMVYDETGRNFVNTMLRAAAERPSLTVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A I + LIE G +H+ +G SW ++A IF Sbjct: 181 NPTYAGDLAAGI----YRLIEQ---PAYGTYHLVNEGS-ASWYEWATEIF---------- 222 Query: 241 SKVYRIFTKQYPT------KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T+ P +A RP + + + A I + W++ + L Sbjct: 223 -RLAEIETRVEPIPAAEWHRAARPPANGVLANTAAAALGITLPPWQDALARCL 274 >gi|118472789|ref|YP_886196.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str. MC2 155] gi|310947300|sp|A0QTF8|RMLD_MYCS2 RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|118174076|gb|ABK74972.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str. MC2 155] Length = 327 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 93/241 (38%), Positives = 133/241 (55%), Gaps = 12/241 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-T 110 DV+IN AAYT VDKAEDEPE A ++NA G G +AKA ++ I+ISTDYVF + R T Sbjct: 84 DVVINCAAYTQVDKAEDEPERAHAVNAVGPGNLAKACAAVDAGLIHISTDYVFGAVDRDT 143 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKER 169 P + T P+NIYG++KLAGE+ V + + ++RTAWVY GS+F+ +M RLA Sbjct: 144 PYEVDDETGPVNIYGRTKLAGEQAVLAAKPDAYVVRTAWVYRGGDGSDFVATMRRLAAGD 203 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 I VV DQ G+PT + A++QI +E GI H A+ G S D A Sbjct: 204 GAIDVVADQVGSPTYTGDLVGALLQIVDGGVEP------GILH-AANAGVASRFDQARAT 256 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 F G +V + ++P A RP+Y+ L + A + W+E +++ + Sbjct: 257 FEAV---GADPERVRPCGSDRHPRPAPRPSYTVLSSQRSAQAGLTPLRDWREALQDAVAA 313 Query: 290 I 290 + Sbjct: 314 V 314 >gi|301311242|ref|ZP_07217170.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|300830816|gb|EFK61458.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 303 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 153/309 (49%), Gaps = 29/309 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------------VQDVEIIRVGRPDIDLLKPKDFASFF 46 M LV G NGQ+ + + V+ VE + + D++ ++ Sbjct: 1 MNILVTGANGQLGNEIRIITRESDDHYVFTDVNQVEGVETVFLDITDLEAVR-----VLV 55 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 DVI+N AAYT VD AE +A +NAE +AKA ++ + ISTDYVF Sbjct: 56 AERRIDVIVNCAAYTNVDAAESNEALAERLNAEAPENLAKAMKAVNGLLVQISTDYVFGK 115 Query: 107 LS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P E P +YG +KL GE+K+ + +VI+RTAW+YS FG NF +M+ L Sbjct: 116 EPYNVPCQEDQQGTPTGVYGMTKLRGEQKIMTVGCKHVIIRTAWLYSEFGKNFCKTMMHL 175 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL---RGIFHMTADGGPVSW 222 R ++ VV DQ GTPT A +A+AI + + + ++ GI+H + + G SW Sbjct: 176 TATRPQLKVVFDQAGTPTYAYDLAKAIAAVLRDYATDIACAIYGKSGIYHYSNE-GVCSW 234 Query: 223 ADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 DF + I AE G + R + ++P+ RP+Y LD +K+ T +R+ W E Sbjct: 235 FDFTKMI----AEYNGTTACDIRPCHSDEFPSPVKRPSYLVLDKTKIKETFGVRVPYWTE 290 Query: 282 GVRNILVNI 290 ++ + N+ Sbjct: 291 SLKRCITNL 299 >gi|255282137|ref|ZP_05346692.1| dTDP-4-dehydrorhamnose reductase [Bryantella formatexigens DSM 14469] gi|255267456|gb|EET60661.1| dTDP-4-dehydrorhamnose reductase [Bryantella formatexigens DSM 14469] Length = 313 Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 137/250 (54%), Gaps = 16/250 (6%) Query: 50 SPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD +++ AA+TAVD AED+ ++ +NA G IA+ + +Y+STDYVFDG Sbjct: 69 APDAVVHCAAWTAVDLAEDDDKVEKVRLVNATGTDNIARVCKMLDCKMLYLSTDYVFDGQ 128 Query: 108 SRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P + + PLN+YG++KL GE VA + I+R AWV+ + G NF+ +ML L Sbjct: 129 GTEPWEPDCKAYKPLNVYGQTKLEGELAVAEQLEKFFIVRIAWVFGVNGKNFIRTMLNLG 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K+ I VV DQ GTPT +AR ++ ++IE T G +H T +GG +SW +F Sbjct: 189 KKYDTIRVVSDQVGTPTYTYDLARLLV----DMIE---TEKYGYYHATNEGGYISWYEFT 241 Query: 227 EYIFWESAERGGP-----YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWK 280 + IF ++ G + KV + T++Y +KA RP S LD KLA + W+ Sbjct: 242 KEIFRQAEAMGHKEYSEEHVKVCPVTTEEYGVSKAKRPFNSRLDKRKLAENGFTPLPVWQ 301 Query: 281 EGVRNILVNI 290 + + L I Sbjct: 302 DALHRYLQAI 311 >gi|89068413|ref|ZP_01155816.1| dTDP-4-dehydrorhamnose reductase [Oceanicola granulosus HTCC2516] gi|89046067|gb|EAR52126.1| dTDP-4-dehydrorhamnose reductase [Oceanicola granulosus HTCC2516] Length = 251 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 102/246 (41%), Positives = 139/246 (56%), Gaps = 11/246 (4%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +F PD +IN AA+TAVD AE E A ++NAE A+A+ A G+P ++ISTDYVF+G Sbjct: 10 TFRPDALINAAAWTAVDAAETEEPAAHALNAEAPAALARLAAEAGLPIVHISTDYVFNGA 69 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSIFGSNFLLSMLRL 165 P + T PL +YG++KL GE+ VA N + +LR++WV+S G+NF+ +MLRL Sbjct: 70 DDAPYATDATTAPLGVYGRTKLLGEQGVAMAANPAGWAVLRSSWVFSAHGANFVKTMLRL 129 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWAD 224 ER E+ VV DQ G PT A IARA IA L +D GI+H + G P SWA Sbjct: 130 GTERDELRVVADQAGGPTPADAIARACATIAEALA--ADPGKSGIYHFS--GTPDTSWAG 185 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA I R G ++ I + YPT A RP S LDC ++ W G+ Sbjct: 186 FAREIM----ARAGLDCRIEEIPSADYPTPAPRPLNSRLDCRTTEAAFDLARPDWHIGLD 241 Query: 285 NILVNI 290 +L ++ Sbjct: 242 AVLKHV 247 >gi|46579774|ref|YP_010582.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. Hildenborough] gi|46449189|gb|AAS95841.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. Hildenborough] gi|311233565|gb|ADP86419.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris RCH1] Length = 291 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 14/281 (4%) Query: 7 GNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + QSL ++ + + VGR D+D+L + A F SP + N A+T VD Sbjct: 12 GRTGLLGQSLVLALRNGGWDAVPVGRDDVDVLDAERLADFIDKASPQAVFNTVAWTQVDL 71 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE+ + A +N ++ + G+ +++STD+VF+G TP +P ++YG Sbjct: 72 AEEHEQEAAQLNRALPASLGRIVRGTGMHLVHLSTDFVFNGRKTTPYSTDDTPDPASVYG 131 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 +KLAGE + S +N ++RTAW++ NF+ ++L L + +I VV DQ G+PT Sbjct: 132 ATKLAGETALLSIAPDNCCVVRTAWLFGPGRRNFVQTILGLCAAKDDIQVVHDQTGSPTY 191 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 + +A +++A + G+FH+ + G SW + A E+ G + KV+ Sbjct: 192 TVDLAAGCVRLA-------ELRATGLFHVV-NAGQASWCELAS----EAVHLAGLHCKVH 239 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I +K +P KA RPAYS LD S+ I W + +R+ Sbjct: 240 AITSKDWPQKAARPAYSVLDTSRFTEVTGIVPRPWPQALRD 280 >gi|167945178|ref|ZP_02532252.1| putative dTDP-4-keto-L-rhamnose reductase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 239 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 114/200 (57%), Gaps = 4/200 (2%) Query: 26 IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 ++ + R DL + + PD+I+N AAYTAVDKAE E +A +IN G +A Sbjct: 1 MVALNRAQCDLSRIETIPGIVQEIKPDLIVNAAAYTAVDKAEAEEALATTINGTAVGVLA 60 Query: 86 KAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 + A ++ STDYVFDG TP E NP+N YG+SKLAGE+ VA Y+I Sbjct: 61 EQARKRNALMVHYSTDYVFDGTKPTPYTEEDEPNPINAYGRSKLAGEQAVAEVGGEYLIF 120 Query: 146 RTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI-IQIAHNLI--EN 202 RT WVY+ G NF+ ++LRLA ER E+ ++ DQ G PT A IA A + +A ++ E Sbjct: 121 RTTWVYAARGHNFIKTILRLAGERDELKIIDDQHGAPTWARNIADATALALARWMLLKEQ 180 Query: 203 SDTSLRGIFHMTADGGPVSW 222 GIF++TA G SW Sbjct: 181 GRELPSGIFNLTA-AGSASW 199 >gi|326405777|gb|ADZ62848.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis CV56] Length = 299 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 24/293 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDERGIAYTATDARELDITDGVAVDKFFDENKPELVYHCAAYTA 62 Query: 63 VDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VDKAEDE E+ IN +G +A+AA +G +YISTDYVF G P+D +P Sbjct: 63 VDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVD--AP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV D Sbjct: 121 KAPESEYGRTKHLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESA 234 Q G PT +A ++ + + E +D G +H+T D P V+W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMVYLVN---EKADF---GFYHLTNDAAPGEDVTWFDFAKEILKDTD 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA RP S + K A I TW+E + N+L Sbjct: 235 VLVKP------VDSSKFPAKAKRPFNSTMSLEK-AKATGFVIPTWQEALANML 280 >gi|1073092|pir||C49906 rfbC homolog - Xanthomonas campestris pv. campestris Length = 302 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 102/303 (33%), Positives = 141/303 (46%), Gaps = 19/303 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGR-PD------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R GR PD D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDRIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDCAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQDTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ I F + ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLDPAYGMGVRIARREFPAHHVACRAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAII-QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E+ VV DQ GTP+ RA+I I L+ G +H+TA G SW FAE I Sbjct: 181 ELRVVADQIGTPSR-----RALIADITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAI 234 Query: 230 FWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 235 FEEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRVI 294 Query: 288 VNI 290 + Sbjct: 295 AEV 297 >gi|160945704|ref|ZP_02092930.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii M21/2] gi|158443435|gb|EDP20440.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii M21/2] gi|295103179|emb|CBL00723.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii SL3/3] Length = 305 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 23/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ L + + +I V P++D+ + F Sbjct: 1 MKIIVTGCKGQLGTELLKQLQEGRSELGPIPEKLLNATVIPVDLPELDISNYRMVDEFVR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD+IIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RNRPDIIINCAAYTNVDGCEVHHDDAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIPQDEATLPGPISAYGSTKLMGEKYVERFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAADLAHEILQLC-------VTHEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A I S + ++P A RP +S LD L T + WK+ + Sbjct: 233 AAEIIRLSGVDATVAPCTSEEYKAKHPDSADRPKWSALDNRMLRCTVGNDVRDWKDAL 290 >gi|283795742|ref|ZP_06344895.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|291076680|gb|EFE14044.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] Length = 304 Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 15/242 (6%) Query: 50 SPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +I+ AA+TAVD AED+ ++ ++NA G IA+A +I +Y+STDYVFD Sbjct: 69 KPDAVIHCAAWTAVDMAEDDDKVEKVRAVNAGGTQNIAEACKAIDCKMLYLSTDYVFDVQ 128 Query: 108 SRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P + PLN+YG++KL GE VA+ Y I+R AWV+ + G NF+ +M+ + Sbjct: 129 GTEPWQPDCKDYKPLNVYGQTKLEGELAVANTLEKYFIVRIAWVFGLNGKNFIKTMINVG 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K E+ VV DQ GTPT +AR L++ +T G +H T +GG +SW DF Sbjct: 189 KTHDEVRVVNDQIGTPTYCFDLARL-------LVDMCETEKYGYYHATNEGGYISWYDFC 241 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 E ++ G +KV + T +Y +KA RP S LD SKL + TW++ V Sbjct: 242 ----CEFYKQYGLKTKVTPVTTAEYGLSKAARPFNSRLDKSKLVENGFQPLPTWQDSVSR 297 Query: 286 IL 287 L Sbjct: 298 YL 299 >gi|254173036|ref|ZP_04879710.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4] gi|214033192|gb|EEB74020.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4] Length = 287 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK +IG NGQ+ L + ++ E++ + D+D+ + P+VIIN A Sbjct: 1 MKVAIIGANGQLGTDLVKVLRKEPGFEVVPLTHGDLDVTVSETLG-ILRKVKPNVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++NA GA +AK A+ IG +YISTDYVFDG P E Sbjct: 60 AYVRVDDAEIYPEKAFAVNAIGALNVAKIAEKIGAINVYISTDYVFDGEKGVPYTEEDVP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SKLAGE +Y+ + I+R A +Y S G NF+ ++ AK ++ Sbjct: 120 NPINVYGTSKLAGEIFTRNYSRRHYIIRVASLYGKAGASGKGGNFVNWVIEKAKRGEKLR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQ +PT L +AR + + E G++HM +G SW +F + IF Sbjct: 180 IVNDQVMSPTHTLDVARTLKEFLKLQPE------FGVYHMVNEGY-CSWYEFTKAIF--- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G ++ I + + A RP++S L+ +L +++ W+EG+R L Sbjct: 230 -EILGWNVEIEPIKSNELNRLAKRPSFSALENRRLHEL-GLKMPDWREGLREYL 281 >gi|227872031|ref|ZP_03990412.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sinus F0268] gi|227842123|gb|EEJ52372.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sinus F0268] Length = 305 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 36/311 (11%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG-RPD-----------------IDLLKPKD 41 M+ V G NGQ+ ++ + + +E + G P+ +DL ++ Sbjct: 1 MRVFVTGVNGQLGHDVMNELARRGIEAVGSGIEPEYVGIMDGSPVCTMPYVGLDLTNEEE 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYI 98 D +I+ AA+TAVD AED PE F IN E G++AK + +Y+ Sbjct: 61 ARRILTEEKIDCLIHCAAWTAVDDAED-PEKRDFVFRINGEVPGSLAKVMKDLKGKMLYL 119 Query: 99 STDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 STDYVF G P +E +P+N+YG SKLAGEE + + I+R AWV+ + G N Sbjct: 120 STDYVFSGEGTKPWEEEERDFHPINVYGASKLAGEEAIRKVLPEHFIVRIAWVFGLNGKN 179 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 F+ +ML++ K+ + VV DQ G+PT L +AR ++ + +T G +H T +G Sbjct: 180 FIKTMLQVGKKHPSVRVVSDQVGSPTYTLDLARLLVDMV-------ETEKYGTYHATNEG 232 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRI 276 +SW DF + I+ E G ++V + T++Y ++A RP S L KL + Sbjct: 233 EYISWYDFTKAIY----EEAGLSTEVIPVTTEEYGLSRARRPFNSRLSKEKLKREGFQGL 288 Query: 277 STWKEGVRNIL 287 WK+ ++ L Sbjct: 289 PHWKDALKRYL 299 >gi|147677415|ref|YP_001211630.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] gi|146273512|dbj|BAF59261.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] Length = 281 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 93/284 (32%), Positives = 147/284 (51%), Gaps = 13/284 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G G + +++++ + E+I +GR D+D+ S ++ P +++N AA Sbjct: 1 MRVMVAGAGGILGRAVTAEFAGRGAEVIALGRTDLDITDLARVRSAAGTWKPGLVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T VD AE EP AF +N G +A A G ++ISTDYVFDG + Sbjct: 61 CTNVDGAEAEPRRAFLVNGLGPRNLAVACRETGAVLVHISTDYVFDGSKPGTYTVYDEPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKL GE+ + + ++RT+W++ G+NF+ ++LR+ +ER VV DQ Sbjct: 121 PLNVYGLSKLWGEKALLCIGGPFYLVRTSWLFGPGGNNFVTTILRIGRERGRARVVNDQQ 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT L +ARAI + S + GI+H+T + G +W FA+ IF ++ G Sbjct: 181 GCPTYTLDLARAIADL-------SASGCYGIYHVT-NQGSTTWYGFAKEIFGQA----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + T + A RP S LD LA T + W++ + Sbjct: 229 KVDLAACSTVEMKRPARRPKNSVLDPFPLAETIGYLLPPWQDAL 272 >gi|254828462|ref|ZP_05233149.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N3-165] gi|284801416|ref|YP_003413281.1| hypothetical protein LM5578_1167 [Listeria monocytogenes 08-5578] gi|284994558|ref|YP_003416326.1| hypothetical protein LM5923_1121 [Listeria monocytogenes 08-5923] gi|258600858|gb|EEW14183.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N3-165] gi|284056978|gb|ADB67919.1| hypothetical protein LM5578_1167 [Listeria monocytogenes 08-5578] gi|284060025|gb|ADB70964.1| hypothetical protein LM5923_1121 [Listeria monocytogenes 08-5923] Length = 276 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 16/285 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I +IE + GI+ ++ G +W +FA I + Sbjct: 181 LGRPTYTYDLADFI----RFVIEKN--PAYGIYQF-SNSGTATWFEFATEILKDKDVTVN 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + ++P KA RP S + K+ I TW++ + Sbjct: 234 PCT------SDEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDAL 271 >gi|330882854|gb|EGH17003.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 179 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 5/179 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVAVLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++V Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNV 179 >gi|121310082|dbj|BAF44347.1| dTDP-rhamnose synthase [Streptococcus oralis] Length = 284 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + V+ + V ++D+ + F +P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERSVDYVAVDVAEMDITNAEMVEKVFAEVNPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYEATLVYISTDYVFDG--KKPVGQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 181 QHGRPTWTRTLAEFMTYLTDNQKE------YGYYHLSNDSTEDTTWYDFAVEILKDSDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + ++P KA RP S + +K A I TW++ ++ Sbjct: 235 VVP------VDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALK 275 >gi|89098351|ref|ZP_01171235.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] gi|89086900|gb|EAR66017.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] Length = 283 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 19/292 (6%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+ + L+ S+ ++ R + D+ A +P+V+IN AA Sbjct: 1 MKIAITGAGGQLGRELTTSLARLGCSVLPFSRDEWDITDAYSTAERMKEVAPEVLINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD E + E AF INA +A+ A + I+ISTDYVF G P +E P Sbjct: 61 FTAVDLCETQREEAFLINAIAPFYLAREAKRLQARFIHISTDYVFSGDQSVPWEEQDPPF 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG+SK AGE + + +I+RT+W+Y G NF+ ++ RL + ++ VV DQ Sbjct: 121 PLNAYGESKRAGETLAMAANPDTLIIRTSWLYGHGGKNFVNTIARLLQTESKLEVVSDQM 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FWESAERG 237 G+PT A +A A+ + L+E + GI+H++ +GG SW +FA+ I F +S Sbjct: 181 GSPTYAKDLAEAV----YFLLEQAP----GIYHVS-NGGSCSWFEFAKEIAVFLKSGAEI 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P S T+ Y A RP YS L+ KL N + WK+ + + L Sbjct: 232 EPVS------TEAYGLPARRPPYSVLNNKKL-NGCGFFMRNWKDALYDYLAK 276 >gi|86739428|ref|YP_479828.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3] gi|86566290|gb|ABD10099.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3] Length = 298 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 126/212 (59%), Gaps = 11/212 (5%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+ N AA+T VD AE + A+++NA G +A A +G I+ISTDYVFDG + P Sbjct: 64 VVFNTAAWTNVDAAESDEAGAYAVNATGPAHLAAACAEVGATLIHISTDYVFDGRAAKPY 123 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + PT P++ YG++KLAGEE V A + ++RTAWVY GSNF+ ++ RLA+ER Sbjct: 124 EVNDPTGPVSAYGRTKLAGEEAVRALLPDASYVVRTAWVYGRTGSNFVKTISRLARERDT 183 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SVV DQ G+PT + +A ++++A S T+ G++H T + G +W FA I Sbjct: 184 LSVVDDQVGSPTWSADLASGLLELA------SSTAPTGVYHCT-NAGETTWFGFAREIV- 235 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 A G +KV T+ +P A RPAY+ L Sbjct: 236 --AALGQDPAKVTPTTTEAFPRPARRPAYAVL 265 >gi|312142998|ref|YP_003994444.1| dTDP-4-dehydrorhamnose reductase [Halanaerobium sp. 'sapolanicus'] gi|311903649|gb|ADQ14090.1| dTDP-4-dehydrorhamnose reductase [Halanaerobium sp. 'sapolanicus'] Length = 280 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+ +L ++ +++E R ++DL + + PD+II+ AA Sbjct: 1 MKVFLTGGTGQLGSALINLLRDKNIEYSAPTRKELDLKNKEKIKCSISKYKPDIIIHSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+KAE E ++A+ +N E IAK+ I +YIS+DYVFDG + + N Sbjct: 61 YTNVEKAELEKDLAYKVNVESTKWIAKSVKEIDAKLLYISSDYVFDGKKEEAYENYDLPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG +K GE+++ + T+ I+RT+W+Y G+NF+ ++L+L K ++I V+ DQ Sbjct: 121 PINYYGLTKYLGEKQIKTITDKAFIIRTSWLYGKNGNNFVKNILKLTKSNQKIKVIDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A I+ I T GI+H +G SW FA E Sbjct: 181 GSPTYTNDLAELILNIMK-------TKKYGIYHAVNEGF-CSWYHFA----LEIVRAKNI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I ++++ + RP S L L N + +K+ ++ L Sbjct: 229 KVNVKAIKSEKFISNIKRPKNSRLSTKSLENNGFNLLRNYKKALKEYL 276 >gi|89889757|ref|ZP_01201268.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BBFL7] gi|89518030|gb|EAS20686.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BBFL7] Length = 278 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 17/287 (5%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G NG + ++ ++ QDV ++D+ + + P IIN AAY Sbjct: 3 KVIITGANGMLGTAIKKALSAQDV--YAFSSNELDITCSQQLHKKIAAIQPHYIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E A+ INA +A+ AD I+ STDYVF+G + TP T+P Sbjct: 61 TAVDLAETEQEKAYRINALAVQKMAQIADQYDATLIHFSTDYVFNGDAATPYTSNQETDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SKLAGE+ ++ + I R +W+Y+ G NF + + E+++V Q G Sbjct: 121 INIYGASKLAGEKAISQVNGKHYIFRISWLYAAHGKNFFNWV--AGTDLEELNIVDSQTG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSAL +A I N + N+D + G++H T + G ++W FA+ I + + G Sbjct: 179 SPTSALDVANFI-----NHLLNNDPANYGVYHFT-NQGEMTWYAFAKAIN-QKLDLGKNI 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V ++ T A RPAYS +DC + + I++ + G+ ++ Sbjct: 232 NAV-----AEFKTIAKRPAYSVMDCGETQRVFDYEITSVENGLDEVV 273 >gi|50954290|ref|YP_061578.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950772|gb|AAT88473.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 295 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/263 (36%), Positives = 143/263 (54%), Gaps = 14/263 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ Q L + E+ +GR D+D+ + DV+IN +AYT Sbjct: 3 RYLIAGAHGQLGQDLQ-RALAGREVTALGRADLDVTDRDTVLAAVAGH--DVVINASAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + A++INA G +A AA G + +STDYVFDG P E +P +P+ Sbjct: 60 KVDDAETHEDDAYAINATGTENLAVAAAQHGATFVTVSTDYVFDGSGAEPYAEDAPRDPI 119 Query: 122 NIYGKSKLAGEE-KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++K AGEE +A++ I+RTAW+Y G+NF +M+RLA+ +SVV DQ G Sbjct: 120 NAYGRTKAAGEELALATHPGGTYIVRTAWLYGAGGANFAKTMVRLAESHETVSVVADQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I+ + +SD + G++H T + G SW FA+ +F SA P Sbjct: 180 QPTWTGDLAERIVTLL-----DSD-APPGVYHGT-NSGQASWFAFAKAVF--SAAGLDP- 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL 263 +V + + A RP+YS L Sbjct: 230 DRVLPTDSAAFTRPAPRPSYSVL 252 >gi|331004510|ref|ZP_08327980.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410688|gb|EGG90111.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae oral taxon 107 str. F0167] Length = 286 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 89/239 (37%), Positives = 127/239 (53%), Gaps = 12/239 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D II+ AAYTAVD A+D + INA+G IA+ A ++ + +YISTDYVFDG P Sbjct: 57 DAIIHCAAYTAVDAAQDNEALVTKINADGTKNIAEVAKALDLSMMYISTDYVFDGEGERP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + PLNIYG +K GE V Y I+R +WV+ + G+NF+ +MLRL KER Sbjct: 117 WEPDDKRAPLNIYGMAKYKGELYVEELLEKYFIVRISWVFGLHGNNFIKTMLRLGKERGA 176 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SVV DQ G+PT ++R + + T G +H T + G SW +FA IF Sbjct: 177 VSVVNDQIGSPTYTPDLSRLLADMIL-------TDKYGRYHATNE-GLCSWYEFACEIF- 227 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ KV + + +P KA RP S +D SKL + W++ + L + Sbjct: 228 ---KQAKLDVKVTSVSSDAFPVKAKRPHNSRMDKSKLTENGFELLPAWQDALSRYLSEL 283 >gi|22537570|ref|NP_688421.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 2603V/R] gi|77409562|ref|ZP_00786244.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae COH1] gi|77414848|ref|ZP_00790962.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 515] gi|22534453|gb|AAN00294.1|AE014257_1 dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 2603V/R] gi|77159098|gb|EAO70295.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 515] gi|77171827|gb|EAO75014.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae COH1] gi|319745372|gb|EFV97683.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae ATCC 13813] Length = 284 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ F+IN G +AKAA +YISTDYVFDG +D+ Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP- 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 122 -DPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLEK-AKATGFVIPTWQDALKEF 277 >gi|317498847|ref|ZP_07957133.1| RmlD substrate binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893875|gb|EFV16071.1| RmlD substrate binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 248 Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 13/256 (5%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ ++ + Q +E I V ++D+ +PD +I+ AA Sbjct: 1 MRVFVTGVKGQLGYDVMNELEKQGLEGIGVDIDEMDITDADQVNKVIKEAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NA+G IAK + + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNEEICRKVNAQGTENIAKVCEELDIKMMYISTDYVFNGQGERPWEPDDKRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + +R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEEHVKKFFTVRIAWVFGVNGKNFIKTMLNLGKTHDHLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GICTWYEFACEIF----KQAGM 228 Query: 240 YSKVYRIFTKQYPTKA 255 V + + +YP KA Sbjct: 229 NVSVAPVSSDEYPAKA 244 >gi|281424260|ref|ZP_06255173.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris F0302] gi|281401529|gb|EFB32360.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris F0302] Length = 290 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 146/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L + D I + G +D+ F II Sbjct: 1 MNILVTGANGQLGNEIQLVAKASHDHYIFTDVCEGCQKLDITNLNAIQEMVKQFDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA++ VD AE EI ++NA +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWSNVDAAESAGEIVETLNATAPENLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLRGEQKIQATGVKHIIIRTAWLYSEFGKNFVKTMLSLTAAKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I+ I N + + GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVILDIIENRKFDGN---EGIYHFSNE-GVCSWFDFTKEI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + Sbjct: 234 LAGHTNCDILPCHSDEFPSPVIRPAYSVLDKTKIKETFGIKIPYWTDSLKKCM 286 >gi|307566286|ref|ZP_07628728.1| dTDP-4-dehydrorhamnose reductase [Prevotella amnii CRIS 21A-A] gi|307344980|gb|EFN90375.1| dTDP-4-dehydrorhamnose reductase [Prevotella amnii CRIS 21A-A] Length = 289 Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 105/294 (35%), Positives = 147/294 (50%), Gaps = 15/294 (5%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L S +D I I G +D+ D II Sbjct: 1 MNILVTGANGQLGNEIQLISKKSKDNYIFTDICEGYTHLDITNIDDIRKIVKEKDIRCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE I ++NA +AKA + I+ISTDYVF TP E Sbjct: 61 NCAAWTNVDSAETAGTIVEALNATAPENLAKAMKEVEGLLIHISTDYVFGADPYNTPCLE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ ++I+RTAW+YS FG NF+ +M+ L + +I V Sbjct: 121 NQEGTPTGVYGLTKLHGEEKIKLTKVKHIIIRTAWLYSKFGHNFVKTMINLTANKPQIKV 180 Query: 175 VCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V DQ GTPT A +A AI I H L EN GI++ + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLAEAIFNIIEHRLYENH----TGIYNYSNE-GVCSWYDFAIKI---A 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G ++ + ++P+K RPAYS LD +K+ +T ++I W ++ + Sbjct: 233 ELSGNTACEILPCHSNEFPSKVKRPAYSVLDKTKIKDTFGLKIPYWVSSLKKCI 286 >gi|303257177|ref|ZP_07343191.1| dTDP-4-dehydrorhamnose reductase [Burkholderiales bacterium 1_1_47] gi|302860668|gb|EFL83745.1| dTDP-4-dehydrorhamnose reductase [Burkholderiales bacterium 1_1_47] Length = 280 Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 15/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK + G +G + L+S + +++ GR D+D+ +F PD +IN AA+ Sbjct: 1 MKIWITGASGMLGTELASK-LSSHDLLLTGRSDLDISNENAVLNFCKQNKPDTVINTAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN- 119 T+VD E E ++A+ +NA G +A A ++ I ISTDYVF+G S P EF N Sbjct: 60 TSVDACETEKDLAWMVNAWGCRNLALACSTVRSRLISISTDYVFEGDSSRPYHEFDVANG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-KERREISVVCDQ 178 +YG++K AGE+ + N++I+R AW+Y G NF+ +ML LA K EI VV DQ Sbjct: 120 GKTVYGQTKFAGEQFIRQLCPNHLIVRIAWLYGSNGKNFVDTMLSLAEKNLSEIKVVNDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTS A+ + +L+ T +G+ H T +G +W DFA+ IF E G Sbjct: 180 IGNPTS----TSAVTYLIKDLLR---TDYKGVVHGTCEGS-ATWYDFAKTIF----ELSG 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV +K++ A RP+ S L+ + + WKE + L Sbjct: 228 LHQKVVPCTSKEFVRPAPRPSNSRLEKRVIQMLGLAPMPEWKEELAKYL 276 >gi|170748796|ref|YP_001755056.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium radiotolerans JCM 2831] gi|170655318|gb|ACB24373.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 109/291 (37%), Positives = 153/291 (52%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV+G GQ+ L ++ D V + GR ++D+ A+ + + +IN AA Sbjct: 1 MDVLVLGGAGQVGTELQALAWPDGVTVHAPGRAELDITDADAVAAALAARAYRAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + A+ +NA +A A + IP +++STDYVF G P ++P Sbjct: 61 YTAVDKAESDVVAAWRLNALAPAILAAATAARSIPLVHVSTDYVFAGTK--PDGAYAPDA 118 Query: 120 PLN---IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P++ +YG SK AGE V + + ++RTAWV S NF+ +MLRLA ER ++VV Sbjct: 119 PIDPQSVYGASKAAGELAVRTGNPRHAVVRTAWVVSPHRGNFVKTMLRLAAERDALTVVN 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PTSA +A A+ IA + + + G FH + G +W FAE I SA R Sbjct: 179 DQHGCPTSAADLAAALATIAQAMAADPEAPA-GTFHCV-NRGDTTWCGFAEAIVAGSARR 236 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 GG V I T YPT A RPA S L L + I W+ + +IL Sbjct: 237 GGRAVPVKGIPTSAYPTPARRPANSRLSTDSLTAAYGIAPRPWQAALDDIL 287 >gi|16803124|ref|NP_464609.1| hypothetical protein lmo1084 [Listeria monocytogenes EGD-e] gi|47094942|ref|ZP_00232555.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes str. 1/2a F6854] gi|224502602|ref|ZP_03670909.1| hypothetical protein LmonFR_08784 [Listeria monocytogenes FSL R2-561] gi|254830146|ref|ZP_05234801.1| hypothetical protein Lmon1_02255 [Listeria monocytogenes 10403S] gi|254898742|ref|ZP_05258666.1| hypothetical protein LmonJ_02965 [Listeria monocytogenes J0161] gi|254911769|ref|ZP_05261781.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes J2818] gi|254936095|ref|ZP_05267792.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes F6900] gi|16410486|emb|CAC99162.1| lmo1084 [Listeria monocytogenes EGD-e] gi|47016560|gb|EAL07480.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes str. 1/2a F6854] gi|258608685|gb|EEW21293.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes F6900] gi|293589721|gb|EFF98055.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes J2818] Length = 276 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 16/285 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I +IE + GI+ ++ G +W +FA I + Sbjct: 181 LGRPTYTYDLADFI----RFVIEKN--PAYGIYQF-SNSGTATWFEFATEILKDKDVTVN 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + ++P KA RP S + K+ I TW++ + Sbjct: 234 PCT------SDEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDAL 271 >gi|291521042|emb|CBK79335.1| dTDP-4-dehydrorhamnose reductase [Coprococcus catus GD/7] Length = 304 Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 15/285 (5%) Query: 10 GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 G Q S + R +D+ + + PDV+ + AA+TAVD AED Sbjct: 29 GSDIQECYSGAADGSAVTRAPYRTLDITDREAVHNVIAEIHPDVVFHCAAWTAVDLAEDA 88 Query: 70 PEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGK 126 + +INA G IA + IYISTDYVF+G P + PLN+YG+ Sbjct: 89 DNVNRVRAINAGGTKNIADVCKELNCKMIYISTDYVFNGQGSEPWQPDCKDYAPLNVYGQ 148 Query: 127 SKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL 186 +KL GE V+ Y I+R AWV+ + G NF+ +ML + K + VV DQ GTPT Sbjct: 149 TKLEGELAVSQILEKYFIVRIAWVFGVNGKNFIKTMLNVGKTHDTVRVVNDQIGTPTYTY 208 Query: 187 QIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI 246 +AR L++ S+T G +H T +GG +SW DF + I+ + G +KV + Sbjct: 209 DLARL-------LVDMSETDKYGYYHATNEGGYISWYDFTKEIY----RQAGYQTKVLPV 257 Query: 247 FTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 T++Y +KA RP S L KL + + TW++ + L I Sbjct: 258 TTEEYGLSKAARPFNSRLAKGKLVEAGFVPLPTWQDALSRYLKEI 302 >gi|25011536|ref|NP_735931.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae NEM316] gi|24413075|emb|CAD47153.1| dTDP-L-rhamnose synthase [Streptococcus agalactiae NEM316] Length = 284 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ F+IN G +AKAA +YISTDYVFDG +D+ Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKAAAKHDATFVYISTDYVFDGEKPVGQEWEVDDLP- 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 122 -DPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLEK-AKATGFVIPTWQDALKEF 277 >gi|329116419|ref|ZP_08245136.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parauberis NCFD 2020] gi|326906824|gb|EGE53738.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parauberis NCFD 2020] Length = 283 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + + E + V ++D+ P+ F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERNEEYVAVDVAEMDITNPEKVEEVFSQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTN- 119 VD AEDE ++ IN +G IAKA + +YISTDYVFDG + P+ +E+ T+ Sbjct: 63 VDAAEDEGKKLNQLINVDGTENIAKACGNHNATLVYISTDYVFDG--QKPVGEEWLETDV 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V Y + + I+RTAWV+ +G NF+ +M LAK+ +++VV D Sbjct: 121 PDPKTEYGRTKRLGEEAVEKYADKFYIIRTAWVFGNYGKNFVFTMQELAKKHPKLTVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N G +H++ D +W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAEN------NKNFGYYHLSNDAKEDTTWYDFAKEILKDTNVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + +P KA RP S ++ K A I TW++ ++ Sbjct: 235 VTP------VDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQDALK 275 >gi|78357226|ref|YP_388675.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219631|gb|ABB38980.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 294 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 15/287 (5%) Query: 2 KCLVIGN-NGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V+G G + Q+L + + ++ GR D D+ + S +PDV+ N A Sbjct: 6 KAVVLGGRTGLLGQALVADLTRAGWQVEAHGREDADVHDSAALEKYICSHAPDVLFNAVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE+E + A +N + + A + + ++ STD+VF+G TP E T Sbjct: 66 YTQVDKAEEEQDAAMRLNKSLPALLGRLACTGNMHLVHYSTDFVFNGRKETPYTEDDETA 125 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG SKLAGE+ + I+R++W++ NF+ ++L L + R+EI+VV DQ Sbjct: 126 PQSIYGLSKLAGEQVLLQMNLPRLTIIRSSWLFGPGRGNFVQTILGLCETRQEITVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A + L+E T G+FH++ +GG +W + A E+ Sbjct: 186 VGSPTYTPDLAAG----SRLLVEKGGT---GLFHLS-NGGQATWCELAA----EAVSLAQ 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V I + YP +A RPAYS LDCS+ I+ W + +R Sbjct: 234 KPCQVRPIPSAAYPQRATRPAYSVLDCSRFTGITGIKPRPWIQALRE 280 >gi|116511029|ref|YP_808245.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris SK11] gi|116106683|gb|ABJ71823.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris SK11] Length = 313 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 150/293 (51%), Gaps = 24/293 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYTA Sbjct: 17 LITGGNGQLGTELRHLLDERGIAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYTA 76 Query: 63 VDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VDKAEDE E+ IN +G +A+AA +G +YISTDYVF G P+D +P Sbjct: 77 VDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVD--AP 134 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P + YG++K GEE V + Y I+RTAWV+ +G NF+ +M LA E++VV D Sbjct: 135 KAPESEYGRTKHLGEEAVVASGVKYYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVND 194 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD---GGPVSWADFAEYIFWESA 234 Q G PT +A ++ + S+ + G +H+T D G V+W DFA+ I ++ Sbjct: 195 QHGRPTWTRTLAEFMVYLV------SEKADFGFYHLTNDAASGEDVTWFDFAKEILKDTD 248 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA RP S + K A I TW+E + ++L Sbjct: 249 VLVKP------VDSSKFPAKAKRPFNSTMSLEK-AKATGFVIPTWQEALASML 294 >gi|323698129|ref|ZP_08110041.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. ND132] gi|323458061|gb|EGB13926.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans ND132] Length = 291 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 14/285 (4%) Query: 7 GNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + Q+L++ + + + R D D+L P + PD+++N YT VD Sbjct: 13 GRTGLLGQALTTAFGRAGALPFPLSRRDCDVLDPLSVEQWLDKNDPDLLVNATGYTQVDL 72 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AEDEP+ AF++N +A A IP ++ STD+VF+G RTP E+ N +++YG Sbjct: 73 AEDEPDQAFALNGSVPPLLATLAARRAIPFVHYSTDFVFNGRKRTPYTEYDEPNAVSVYG 132 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 SK GE + +I+R +W++ +NF+ +L LA R+++VV DQ G+P+ Sbjct: 133 ISKADGERGLLKLGYERTLIIRISWLFGPGRTNFVKKILGLADVHRKLTVVNDQVGSPSY 192 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 IA ++ L+E T G+FH+ A+ G SW A + G V Sbjct: 193 TPDIAENTVK----LLEKDAT---GLFHL-ANSGETSWHGLAN----TAVNLAGKDCTVS 240 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + T YPTKA RP+YS LD +K T I W++ +R ++ Sbjct: 241 PVPTTAYPTKAFRPSYSVLDLAKFTRTTGITPRRWEDALRQYVLG 285 >gi|295102417|emb|CBK99962.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii L2-6] Length = 304 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 144/298 (48%), Gaps = 23/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + +I V P++D+ K F Sbjct: 1 MKIIVTGCRGQLGTEIIKQLREGRSELGPIPEKLVSATVIPVDLPELDITNYKMVDDFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AA+T VD E + AF NA G +A+AA G +++STDYVF G Sbjct: 61 RQRPDVIINCAAFTNVDGCEVNHDTAFKANAIGPRNLAQAATKTGARLVHVSTDYVFSGR 120 Query: 108 SR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIPQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A+ +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAVDLAHEILQLCV-------THEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A I S + ++P A RP +S LD L T + WK+ + Sbjct: 233 ASEIIRLSGVDATVSPCTSEEYKAKHPDSADRPKWSALDNRMLRCTVGNDVRDWKDAL 290 >gi|254823646|ref|ZP_05228647.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL J1-194] gi|254853032|ref|ZP_05242380.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL R2-503] gi|255522693|ref|ZP_05389930.1| hypothetical protein LmonocFSL_16046 [Listeria monocytogenes FSL J1-175] gi|300765931|ref|ZP_07075904.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N1-017] gi|258606380|gb|EEW18988.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL R2-503] gi|293592869|gb|EFG00630.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL J1-194] gi|300513393|gb|EFK40467.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N1-017] Length = 276 Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 16/285 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVNEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I +IE + GI+ ++ G +W +FA I + Sbjct: 181 LGRPTYTYDLADFI----RFVIEKN--PAYGIYQF-SNSGTATWFEFATEILKDKDVTVN 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + ++P KA RP S + K+ I TW++ + Sbjct: 234 PCT------SDEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDAL 271 >gi|317503438|ref|ZP_07961477.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606] gi|315665449|gb|EFV05077.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606] Length = 290 Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 149/294 (50%), Gaps = 15/294 (5%) Query: 1 MKCLVIGNNGQIAQSLS--SMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + S QD I + G +D+ II Sbjct: 1 MNILVTGANGQLGNEIQKVSKHSQDHYIFTDVCDGYEKLDITNLDAIRQMVAQLDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I +NA+ +A A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGDIVEQLNAKAPENLAMAMKEVEGLLVHISTDYVFGGDPYNTPCRE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P +YG++KL GE+++ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGSPTGVYGQTKLHGEQRILATGVKHIIIRTAWLYSEFGKNFVKTMLSLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWES 233 V DQ GTPT A +A I +++IEN + GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVI----YDIIENRKFDNNEGIYHFSNE-GVCSWYDFTKVI---A 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD SK+ +T I I W + +R + Sbjct: 233 QMAGHTTCDIQPCHSDEFPSPVKRPAYSVLDKSKIKDTFGITIPYWTDSLRKCI 286 >gi|281490688|ref|YP_003352668.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis KF147] gi|281374457|gb|ADA63978.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis KF147] Length = 299 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 151/293 (51%), Gaps = 24/293 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDERGIAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYTA 62 Query: 63 VDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VDKAEDE E+ IN +G +A+AA +G +YISTDYVF G P+D +P Sbjct: 63 VDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVD--AP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV D Sbjct: 121 KAPESEYGRTKRLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESA 234 Q G PT +A ++ + + E +D G +H+T D P V+W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMVYLVN---EKADF---GFYHLTNDAAPGEDVTWFDFAKEILKDTD 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA RP S + K A I TW+E + ++L Sbjct: 235 VLVKP------VDSSKFPAKAKRPFNSTMSLEK-AKATGFVIPTWQEALASML 280 >gi|260893428|ref|YP_003239525.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4] gi|260865569|gb|ACX52675.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4] Length = 278 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 143/290 (49%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G++ +++ + + ++I + R +D+ K A + P V++N AA Sbjct: 1 MRVLVTGAAGRLGRAMVKELEERGFDVIGLARQQLDITSRKAVAEVLREYRPRVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++P AF +N +A + ++ISTDYVFDG P + P Sbjct: 61 YTDVDGAEEDPRRAFLVNGLAVKYLASLCAASEAKLVHISTDYVFDGEKGEPYHVYDPPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG+SK GE + +Y+I+R +W++ G NF+ +LRLA+ EI VV DQ+ Sbjct: 121 PINRYGESKYWGEAAIREEGGDYLIVRISWLFGT-GRNFVSMILRLAETEGEIKVVEDQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT ARAI + RG FH+T + G SW + A + G Sbjct: 180 GSPTYTPDAARAITDLIL-------AGARGTFHVT-NAGTASWYELA----CSAVRLAGI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V ++ +P A RP Y+ LD L + +W++ + L Sbjct: 228 KANVIPCRSEDFPRPARRPRYTVLDPFPLKEYLGYSLPSWEDALERYLAR 277 >gi|153809621|ref|ZP_01962289.1| hypothetical protein RUMOBE_00002 [Ruminococcus obeum ATCC 29174] gi|149833799|gb|EDM88879.1| hypothetical protein RUMOBE_00002 [Ruminococcus obeum ATCC 29174] Length = 283 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G +GQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 2 LKVWIAGASGQIGRALNDVLDPMQIEALNTDLDELDITDTDEVINFGTVNRPDVIINCTG 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T D+ E PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TN Sbjct: 62 ITDTDECEANPEHAYRVNALGARNLSIVARKCGSKIVQLSTDDVFDGQSKKPYTEFDDTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK AGE V +T+ + ++R+ WVY G NF+ +L A+ +SV DQF Sbjct: 122 PLTVYGRSKRAGENYVKEFTHKHFVIRSNWVYGHGGHNFVNRVLAAAEAGNGLSVASDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +A+ I+ + T+ G +H+T G S +FA+ I + G Sbjct: 182 GSPTSAKDLAKMIMYLIS-------TNEYGTYHVTC-RGVCSRYEFAQEIL----KLAGK 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + T+Q A RP Y+ LD L + WKE ++ + Sbjct: 230 DIELRAVPTEQSDLSAVRPPYAVLDNFILRIIEVYDMPDWKESLKEYM 277 >gi|315221445|ref|ZP_07863366.1| dTDP-4-dehydrorhamnose reductase [Streptococcus anginosus F0211] gi|315189564|gb|EFU23258.1| dTDP-4-dehydrorhamnose reductase [Streptococcus anginosus F0211] Length = 283 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVF G P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFAG--DKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDTD-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + ++P KA RP S + +K A I TW++ ++ Sbjct: 233 ----VEVLPVDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|319939385|ref|ZP_08013745.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus anginosus 1_2_62CV] gi|319811371|gb|EFW07666.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus anginosus 1_2_62CV] Length = 283 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFAEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SP 117 VD AEDE E+ ++IN G +AKAA+ G +YISTDYVF G P+ + Sbjct: 63 VDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFAG--DKPVGQEWEVDDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDTD-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + ++P KA RP S + +K A I TW++ ++ Sbjct: 233 ----VEVLPVDSSKFPAKAKRPLNSTMSLAK-AKATGFVIPTWQDALKEF 277 >gi|11500015|ref|NP_071262.1| dTDP-4-dehydrorhamnose reductas [Archaeoglobus fulgidus DSM 4304] Length = 285 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 32/299 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK VIG GQ+ L + ++ + + D+D+ + PDVIIN AAY Sbjct: 1 MKVAVIGAKGQLGTDLVDVLKEEFTVYPLTHEDVDVAVSESL-EVLRDIHPDVIINTAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE+ E AF++NA GA +A+ + I IYISTDYVFDG P E NP Sbjct: 60 VRVDDAENHAEKAFAVNAIGALNVARISSEIDAVNIYISTDYVFDGEKGEPYVETDKPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK AGE +Y+ + ++R A +Y S G NF+ ++ +A++ +E+ +V Sbjct: 120 INVYGASKYAGEILTKNYSEKHYVIRVASLYGKAGASGKGGNFVNWVVDMARKGQELRIV 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIF-- 230 DQF +PT +A A+ + LR GI+HM D G SW +F + IF Sbjct: 180 ADQFMSPTYTKDVALAVREF---------LKLRPDYGIYHMVND-GYCSWFEFTKAIFEI 229 Query: 231 --WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 W+ + S++ R+ A RPA+S L KL I++ W+E +R+ L Sbjct: 230 LDWDVEIQPIKSSELNRL--------ARRPAFSALQNYKLERI-GIKMRHWREALRDYL 279 >gi|15672181|ref|NP_266355.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis Il1403] gi|12723053|gb|AAK04297.1|AE006257_7 dTDP-L-rhamnose synthase [Lactococcus lactis subsp. lactis Il1403] Length = 299 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 150/293 (51%), Gaps = 24/293 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDERGMAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYTA 62 Query: 63 VDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VDKAEDE E+ IN +G +A+AA +G +YISTDYVF G P+D +P Sbjct: 63 VDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVD--AP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV D Sbjct: 121 KAPESEYGRTKHLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESA 234 Q G PT +A ++ + S+ + G +H+T D P V+W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMVYLV------SEKADFGFYHLTNDAAPGEDVTWFDFAKEILKDTD 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA RP S + K A I TW+E + ++L Sbjct: 235 VLVKP------VDSSKFPAKAKRPFNSTMSLEK-AKATGFVIPTWQEALASML 280 >gi|289434341|ref|YP_003464213.1| hypothetical protein lse_0974 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170585|emb|CBH27125.1| rmlD [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 276 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/285 (32%), Positives = 146/285 (51%), Gaps = 16/285 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ P+ +I+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKSAVKKAISEVKPEWVIHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + + +N +G I++AA S+G +YISTDYVFDG P T Sbjct: 61 FTNVEAAEDELKAVNWEVNVDGTENISEAAASVGAKLVYISTDYVFDGTKEEPYLPEDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKIALEKNKATYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I +IE + GI+ ++ G +W DFA I + Sbjct: 181 LGRPTYTYDLADFI----RFVIEKN--PAYGIYQF-SNNGTATWFDFATEILKDKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + ++P KA RP S + K+ I TW++ + Sbjct: 234 PCT------SDEFPQKAERPKTSIMSLDKVEQL-GFTIPTWQDAL 271 >gi|297718754|gb|ADI50278.1| 4-ketoreductase [Streptomyces sp. MK730-62F2] Length = 295 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 143/293 (48%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G +G + + + + + ++ + R +D+ P S PDV++N AA Sbjct: 1 MRWLITGASGMLGRDVVEELTRRGERVVGLDRAALDITSPPAVDSAVREHRPDVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPT 118 YTAVD AE + A IN G +A+A + I++STDYVF G +R TP E T Sbjct: 61 YTAVDDAETDEARALEINGAGPRLLARACAAHEARLIHVSTDYVFSGEARTTPYPEDHRT 120 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE+ V +LRTAW+Y + GSNF+ +M+ L R + VV D Sbjct: 121 GPRTAYGRTKLAGEQAVLEELPGASAVLRTAWLYGVHGSNFVRTMIGLEARRDTLDVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + +A+ I ++ L + G+FH T + G +W D A +F + G Sbjct: 181 QRGQPTWSADVAQRIAELGPRLGPEA----HGVFHAT-NSGEATWYDLAREVF---SLIG 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +P A RPAYS L + W+ + L I Sbjct: 233 ADPDRVRPTSSAAFPRPAPRPAYSALAHRRWQEIGLPLPRDWRSALHEALPRI 285 >gi|210615557|ref|ZP_03290655.1| hypothetical protein CLONEX_02873 [Clostridium nexile DSM 1787] gi|210150224|gb|EEA81233.1| hypothetical protein CLONEX_02873 [Clostridium nexile DSM 1787] Length = 289 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 18/290 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK V G +GQ+ +++ V D E++ ++D+ + + +F PDVIIN Sbjct: 5 MKIWVSGASGQVGTAITD--VADPLAFELLNTDVEELDITEIDEVLNFAELNRPDVIINC 62 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 A T V E PE+A+ +NA GA ++ AA IG + ISTD VFDG S P EF Sbjct: 63 AGITDVALCEKNPELAYKVNALGARNLSIAARKIGAKLVQISTDDVFDGQSSEPYCEFDD 122 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP +YG+SK AGE V +T + I+R+ W+Y G NF+ ++L K + V D Sbjct: 123 TNPKTVYGRSKRAGENYVKEFTEKHFIIRSNWIYGK-GKNFVSNLLERVKTEHVLPVASD 181 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QFG+PTSA +AR ++++ DT+ G +H+TA G S +FA+ I + Sbjct: 182 QFGSPTSANDLARLLLELM-------DTNEYGTYHITAK-GTCSRYEFAKEILRLTDHD- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + TK+ + RPAY+ LD L + + W+E ++ L Sbjct: 233 ---VTIQPVPTKESEFSSVRPAYAVLDNFILRILNMQEMPEWRESLKIFL 279 >gi|257784809|ref|YP_003180026.1| dTDP-4-dehydrorhamnose reductase [Atopobium parvulum DSM 20469] gi|257473316|gb|ACV51435.1| dTDP-4-dehydrorhamnose reductase [Atopobium parvulum DSM 20469] Length = 299 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 109/308 (35%), Positives = 145/308 (47%), Gaps = 30/308 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-----VGRPDIDLLKPKDF---------ASFF 46 M L+ G +GQ+ L + V I PD+D + A F Sbjct: 1 MHVLITGAHGQLGNELKRLFESGVSEIGPIPEVFVEPDVDYTDADELDITSSEAVSAWFD 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 DV+IN AA T VD E E AF++NA G +A+A + + +STDYVF G Sbjct: 61 QHERYDVVINCAAATNVDGCESNFEAAFAVNALGPMNLARACSATQTKLVQVSTDYVFSG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 TP E P++ YG+SKLAGE + ++RTAW+Y G NF+ +M L Sbjct: 121 KESTPRTEQDAPYPVSAYGRSKLAGEGLALAANPRTFVVRTAWLYGYVGKNFVATMRTLG 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + EISVV DQ G PTSA +A AI+ IA T GI+H T + G SWADFA Sbjct: 181 AKYPEISVVDDQVGNPTSANDLAHAILCIAA-------TENYGIYHATNE-GTCSWADFA 232 Query: 227 EYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 E I S KV R+ + Q+ P A RPAYS L L +T + W+E Sbjct: 233 EAIMAGSNLD----CKVTRVTSAQWKELHPESASRPAYSSLVNGHLESTIGNCMRPWQEA 288 Query: 283 VRNILVNI 290 + L + Sbjct: 289 LATYLSKV 296 >gi|89093584|ref|ZP_01166532.1| dTDP-4-keto-L-rhamnose reductase [Oceanospirillum sp. MED92] gi|89082274|gb|EAR61498.1| dTDP-4-keto-L-rhamnose reductase [Oceanospirillum sp. MED92] Length = 304 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K L+ G NGQ+ +L + +I + + +D+ + PD +IN A Sbjct: 10 VKILITGANGQVGTALQLQGENESFFNVIPLDKSKLDITDSEQINELLAQHLPDYVINCA 69 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+ +D+AE + E +++N EG +A A + IP ++STDYVFDG + E Sbjct: 70 AFDHIDEAEHKSETCYAVNTEGVEKLALACGDLNIPMFHLSTDYVFDGHYASGYTEDDEV 129 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +Y SK GEE++ ++ILR +W++S G+NF+L L A++ + + V D+ Sbjct: 130 APLGVYADSKWQGEERLRQLLPKHIILRVSWLFSEQGNNFVLRTLEAARQSKVLEAVSDR 189 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS-WADFAEYIFWESAE-R 236 G PTSA +AR I+ + + +D G +H G ++ DF + I + Sbjct: 190 RGCPTSAADVARVILAMLKQIHNGADA--WGTYHYC--GAEITNRYDFCKEILIAAGNYE 245 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I +K Y T+A RP S L C KL + IR W++ ++ ++ Sbjct: 246 NFEVEKMVPISSKDYVTEAQRPNTSILICKKLLSVFGIRQKPWRQELQWLM 296 >gi|271962203|ref|YP_003336399.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM 43021] gi|270505378|gb|ACZ83656.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM 43021] Length = 285 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 142/287 (49%), Gaps = 14/287 (4%) Query: 2 KCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G +G +A + L + ++ + R ++DL + PD ++N AA+ Sbjct: 3 RWLITGASGMLATELLGRLQAAGESVLALRRDELDLRDGPAVRHLVSACRPDTVVNCAAW 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE A ++N G A+A+A + +G I STDYVFDG + P E + T P Sbjct: 63 TAVDDAETREAEALAVNGHGVRALAEACERLGARMIQPSTDYVFDGTALDPYREDARTCP 122 Query: 121 LNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +N YG++KLAGE V YV+ RTAW+Y G NF+ +M L + R + VV DQ Sbjct: 123 VNAYGRTKLAGEHAVLEVLPETGYVV-RTAWLYGATGKNFVRTMAELERTRPSLEVVDDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A II++ G++H T G SW FA IF G Sbjct: 182 VGPPTWAGDLAAGIIELGRT------GPPPGVYHATGS-GQTSWYGFAREIF---KLVGA 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++ + TK++ A RPAYS L + + + W+E +R Sbjct: 232 DPDRITPVSTKEFARPAPRPAYSVLGHERWSLAGLPPMRDWREALRG 278 >gi|76787170|ref|YP_330067.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae A909] gi|77412514|ref|ZP_00788812.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae CJB111] gi|76562227|gb|ABA44811.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae A909] gi|77161428|gb|EAO72441.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae CJB111] Length = 284 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 143/290 (49%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ F+IN G +AKAA +YISTDYVFDG +D+ Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP- 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GEE V Y + + +RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 122 -DPKTEYGRTKRMGEELVEKYASKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDTDVE 234 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 P + + Q+P KA RP S + K A I TW++ ++ Sbjct: 235 VKP------VDSSQFPAKAKRPLNSTMSLEK-AKATGFVIPTWQDALKEF 277 >gi|225870341|ref|YP_002746288.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. equi 4047] gi|225699745|emb|CAW93509.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. equi 4047] Length = 282 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 142/285 (49%), Gaps = 18/285 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPTN 119 VD AE+E + + +IN G IAKA + G +YISTDYVFDG + E + Sbjct: 63 VDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGQKPAGQEWLETDTPD 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P YG++K GE V YT + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 123 PQTAYGRAKRLGELAVERYTKQFYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQH 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGG 238 G PT +A + +A N G +H++ D +W DFA I E+A Sbjct: 183 GRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETA---- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V + + +P KA RP S ++ K A I TW+E + Sbjct: 233 --VEVVPVDSSAFPAKAKRPFNSTMNLDK-AKATGFVIPTWQEAL 274 >gi|300782937|ref|YP_003763228.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis mediterranei U32] gi|299792451|gb|ADJ42826.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis mediterranei U32] Length = 301 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 151/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF--------SPD 52 + LV G +GQ+ + L+++ V+++ G ++D+ + + S Sbjct: 5 LTVLVPGGSGQLGRDLAALASPSVDVVAPGSAELDVTVTSQVLAAVGALAERAREAGSAP 64 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V++N AAYTAVD AE + E AF++NA+G +A A S +P I++STDYVF G + P Sbjct: 65 VVVNAAAYTAVDAAETDEERAFAVNADGPRVLAAACASRRVPLIHVSTDYVFPGEASAPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + P + YG++K AGE+ V + ++RT W+Y GSNF+ +M RL R + Sbjct: 125 EPSDKLGPRSAYGRTKAAGEDAVLGSGASSWVVRTGWLYGRSGSNFVKTMARLESSRDTL 184 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 SVV DQ G PT +A ++++A + S R I H T + G VSW FA+ IF Sbjct: 185 SVVDDQVGGPTWTADLAAGLLELASRVAAGEGPSQR-ILHCT-NAGEVSWCGFAQAIF-- 240 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G S+V + +YP A RPAYS L + + +W+E + Sbjct: 241 -KHLGADPSRVRPCTSAEYPQAATRPAYSVLSPASWLEAGLTPMRSWEEAL 290 >gi|195977965|ref|YP_002123209.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974670|gb|ACG62196.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 282 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/287 (33%), Positives = 144/287 (50%), Gaps = 20/287 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQLKPSLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AE+E + + +IN G IAKA + G +YISTDYVFDG ++ E+ T+ Sbjct: 63 VDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDG-NKPAGQEWLETDVP 121 Query: 120 -PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GE V Y Y I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTAYGRAKRLGELAVERYAKQYYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA I E+A Sbjct: 182 HGRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E + Sbjct: 233 ---VEVVPVDSSAFPAKAKRPFNSTMNLDK-AKATGFVIPTWQEALE 275 >gi|16127845|ref|NP_422409.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|221236666|ref|YP_002519103.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] gi|13425365|gb|AAK25577.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|220965839|gb|ACL97195.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] Length = 293 Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/286 (36%), Positives = 149/286 (52%), Gaps = 10/286 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A +L + EII + R D DL P+ + L+ D+++N AA+ Sbjct: 1 MKILQFGRTGQVATALRAAAQGRSEIIALSRADCDLADPERLRATILAADCDLVVNAAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE PE AF++NA A+A A G+P ++STD VFDG + E P Sbjct: 61 TQVDPAEAAPEAAFAVNARAPAAMAAACAERGLPFAHLSTDAVFDGRTDRAYVETDRAEP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGE+ V ++ V+LR +WV+S +G N++ ML+LA+ER + VV DQFG Sbjct: 121 INVYGRSKLAGEQAVLAHPRT-VVLRISWVFSRYGRNYVSFMLKLARERETLKVVADQFG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 TPT +A ++ A G+FH A+ G S DFA ++A P Sbjct: 180 TPTDGEALADFLVATAPRWAAAPADDPAFGLFHF-ANAGETSRFDFA-----KAAIDRDP 233 Query: 240 YSKVYRIFTKQ--YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +K T Q + A RP S LD +KL W+ V Sbjct: 234 MTKARLEPTTQAAFAEPAPRPPRSPLDTAKLRAVFGFSPEAWRPAV 279 >gi|48474182|dbj|BAD22652.1| dTDP-rhamnose synthase [Streptococcus mitis] Length = 281 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 143/275 (52%), Gaps = 21/275 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +V + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNVNYVAVDVAEMDITNAEMVEKVFAEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + P+ + + Sbjct: 63 VDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDG--KKPVGQEWEVDDL 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LAK + ++VV D Sbjct: 121 PDPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGKNFVFTMKNLAKTHKTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 181 QHGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDSTEDTTWYDFAVEILKDSD-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 +V + + ++P KA RP S + +K T Sbjct: 233 ----VEVVPVDSSKFPAKAKRPLNSTMSLAKAKAT 263 >gi|125623087|ref|YP_001031570.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris MG1363] gi|27462668|gb|AAO15545.1|AF458777_4 RfbD [Lactococcus lactis subsp. cremoris MG1363] gi|124491895|emb|CAL96816.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris MG1363] gi|300069835|gb|ADJ59235.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris NZ9000] Length = 299 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 152/293 (51%), Gaps = 24/293 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + ++D+ +FF P+++ + AAYTA Sbjct: 3 LITGGNGQLGTELRHLLDERGMAYTATDAKELDITDKVAVDTFFDKNKPELVYHCAAYTA 62 Query: 63 VDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VDKAEDE E+ IN +G +A+AA +G +YISTDYVF G P+D +P Sbjct: 63 VDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVD--AP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV D Sbjct: 121 KAPESEYGRTKHLGEEAVVASGVKHYIVRTAWVFGSYGPNFVFTMQNLATRFPELTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESA 234 Q G PT +A ++ + + E +D G +H+T D P V+W DFA+ I ++ Sbjct: 181 QHGRPTWTRTLAEFMVYLVN---EKADF---GFYHLTNDAAPGEDVTWFDFAKEILKDTD 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + + ++P KA RP S + K A I TW++ + ++L Sbjct: 235 VLVKP------VDSSKFPAKAKRPFNSTMSLEK-AKATGFVIPTWQDALASML 280 >gi|313633866|gb|EFS00586.1| dTDP-4-dehydrorhamnose reductase [Listeria seeligeri FSL N1-067] Length = 276 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 92/285 (32%), Positives = 146/285 (51%), Gaps = 16/285 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ P+ +I+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKSAVKKAISEVKPEWVIHCAA 60 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + + +N +G I++AA S+G +YISTDYVFDG P T Sbjct: 61 FTNVEAAEDELKAVNWEVNVDGTENISEAAASVGAKLVYISTDYVFDGTKEEPYLPEDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKIALEKNKATYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I +IE + GI+ + + G +W DFA I + Sbjct: 181 LGRPTYTYDLADFI----RFVIEKN--PAYGIYQFS-NNGIATWFDFATEILKDKDVTVK 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 P + + ++P KA RP S + K+ I TW++ + Sbjct: 234 PCT------SDEFPQKAERPKTSIMSLDKVEQL-GFTIPTWQDAL 271 >gi|289612619|emb|CBI60072.1| unnamed protein product [Sordaria macrospora] Length = 259 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 4 LVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ + L+ + C +I+ + R ++L P A+ +IN AAYTA Sbjct: 5 LVTGANGQLGRELARIACPPGYDIVALDRAALNLADPVAIAAKVAERDWAAVINGAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE++ A+++NA A +A + GIP + +STDYVF G + P PL Sbjct: 65 VDKAENDVVTAWAVNALAPAAFTQACAAAGIPLVQVSTDYVFAGDKDGAWEVTDPVAPLG 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKL GE V S + I+RTAWV S G+NF+ ++LR+A R +SVV DQ G+P Sbjct: 125 VYGASKLGGELAVRSSGARHAIVRTAWVVSAHGTNFVKTILRVAATRDTLSVVDDQVGSP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 TSA +A+A++ IA L E++D G FH + Sbjct: 185 TSASDLAQALLTIAVRLTEDADAPT-GTFHFS 215 >gi|212225002|ref|YP_002308238.1| hypothetical dTDP-4-dehydrorhamnose reductase [Thermococcus onnurineus NA1] gi|212009959|gb|ACJ17341.1| hypothetical dTDP-4-dehydrorhamnose reductase [Thermococcus onnurineus NA1] Length = 288 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG +GQ+ L + +D E+I + D+D+ P+ PDVIIN A Sbjct: 1 MRVAIIGASGQLGTDLVKVFGEDPSFEVIPLTHRDLDVTVPETL-RVLKELKPDVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++N GA +A+ A I +YISTDYVFDG P E Sbjct: 60 AYVRVDDAEIYPEKAFAVNTIGALNVARVASEIDAINVYISTDYVFDGEKGEPYTEDDVP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK AGE +Y+ Y I+R A +Y S G NF+ ++ AK E+ Sbjct: 120 NPINVYGASKYAGEIFTRNYSRKYYIIRVASLYGKAGASGKGGNFVNWVIEKAKRGEELR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQF +PT + +AR + + E G++HM +G SW +F IF Sbjct: 180 IVDDQFMSPTYTMDVARTLREFLEIGPE------WGVYHMVNEGY-CSWYEFTRAIF--- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +V I + + A RP +S L KL +R+ W+E +R L Sbjct: 230 -EILGWDVEVKPIKSSELNRLARRPRFSALRNEKLERI-GLRMMDWEEALREYL 281 >gi|91793900|ref|YP_563551.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] gi|91715902|gb|ABE55828.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] Length = 292 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 88/265 (33%), Positives = 140/265 (52%), Gaps = 10/265 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ Q+L + D+ +I + R +D+ + +P +IIN A +T V Sbjct: 11 LILGAKGQVGQALLASKPADINVIALSRKALDITNVPKLGQCLQALTPQIIINAAGFTQV 70 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 + AE E E+A SIN +A+ A G I++S+DYVFDG +P NP+N Sbjct: 71 ELAEQERELATSINGAAVSELARLAKQQGARLIHLSSDYVFDGNKHSPYLCTDSPNPINH 130 Query: 124 YGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++K GE + ++ + + I+RT+W+Y G +F+ SML L + + +SVV DQ+G+P Sbjct: 131 YGQTKRQGERGILAHNDTKLTIVRTSWLYGGQGRHFVDSMLNLMRTKETLSVVADQYGSP 190 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS- 241 T L +A I + H S I+H + D G SW +FA I ++ G Sbjct: 191 TYVLGLANFIWSLRH------VKSFSPIYHWS-DSGVCSWFEFAVEIQRQALLLGIVKQP 243 Query: 242 -KVYRIFTKQYPTKAHRPAYSCLDC 265 + I ++ Y + +RPAYS L C Sbjct: 244 IPIIPISSECYSSIVNRPAYSALAC 268 >gi|218780350|ref|YP_002431668.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans AK-01] gi|218761734|gb|ACL04200.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans AK-01] Length = 292 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 145/289 (50%), Gaps = 18/289 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +K L+ GN G + + EI +D+ PD+++N AAY Sbjct: 4 LKILITGNQGLLGTECVRVLYPTHEIHGFSSNILDIRDKSQVEGRIKEIRPDIVVNCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP---IDEFSP 117 T VD E + A+ +NA G +A+A G ++ISTDYVFDG+ P ++ SP Sbjct: 64 TKVDSCETHFQDAWDVNAIGPENLARAVRKYGGFLVHISTDYVFDGVRSIPHPYTEDDSP 123 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI--SVV 175 NPL+ YGKSKLAGEE V S + I+RTAW+Y G NFL +MLRL+KE VV Sbjct: 124 -NPLSAYGKSKLAGEEAVRSLCPLHAIVRTAWLYGAAGPNFLKTMLRLSKENPAALRKVV 182 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG+PT A +A+ I LIE+ +T G FH T D G +W + AE Sbjct: 183 NDQFGSPTWAYSLAKQI----KVLIESGET---GTFHAT-DQGYCTWYELAEAFLTLMDV 234 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + + T+ YPT A RP+ S L+ + + W++ ++ Sbjct: 235 K----HNLTPCETRDYPTPARRPSNSILENRRFKELDIDVMPPWQDDLK 279 >gi|288926473|ref|ZP_06420393.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae D17] gi|288336764|gb|EFC75130.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae D17] Length = 295 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 145/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L++ +D I + +D+ + II Sbjct: 1 MNILVTGANGQLGNELQLAAKGSKDHYIFTDVCDNYQKLDITSLEAVRKMVGDNDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +A A +G I++STDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGEIVETLNATAPEHLAVAMKEVGGLLIHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P IYG +KL GE+K+ + ++I+RTAW+YS +G NF+ +M+ L K + ++ V Sbjct: 121 DQKGTPTGIYGLTKLHGEQKIKATEAKHIIIRTAWLYSEYGKNFVKTMMHLTKTKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N + GI+H + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLANVIFDIVENRKYEGHS---GIYHFSNE-GVCSWYDFARKI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G ++ + ++P+ RPAYS LD +K+ T I I W + + + Sbjct: 234 IAGNTDCEILPCHSDEFPSPVKRPAYSVLDKTKIKETFGITIPYWTDSLEKCM 286 >gi|325265874|ref|ZP_08132560.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] gi|324982512|gb|EGC18138.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] Length = 313 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ + + + E+I +D+ + +F PDVIIN A Y Sbjct: 27 MRILLTGANGQVGRCIKQQKSEHWEMIAADSNTLDITSAAAVNNMVQNFEPDVIINAAGY 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ AE E F++NAEG +A+ A GI I+IS+DYVFDG R P E NP Sbjct: 87 TNLEAAECHKEQVFAVNAEGPRILAETAARAGIRFIHISSDYVFDGQKRMPYTENDYANP 146 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERREISVVCD 177 L+ Y KSKLAGE S + +I+R++WV+S F +NF+ +L L E+ + D Sbjct: 147 LSTYAKSKLAGELLALSANPDSIIVRSSWVFSEFDNHCNNFVKRVL-LQAASGEVKTLSD 205 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + G PT A +AR ++ +A + RGI+H D V+ +FA+ + A Sbjct: 206 KIGCPTYAGDLARIMVDLAQ-----CRQAPRGIYHYCGDKA-VNRLEFAQAVV--RALPD 257 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + V + + + RP YS L C K+ S W+ ++ I+ Sbjct: 258 GGHVAVREVPAAENAERTPRPPYSVLSCEKI-RALGYEASDWQSALKRIV 306 >gi|242400019|ref|YP_002995444.1| dTDP 4-dehydrorhamnose reductase [Thermococcus sibiricus MM 739] gi|242266413|gb|ACS91095.1| dTDP 4-dehydrorhamnose reductase [Thermococcus sibiricus MM 739] Length = 287 Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 148/298 (49%), Gaps = 28/298 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG NGQ+ L + D E++ + D+D+ D PDVIIN A Sbjct: 1 MRVAIIGANGQLGSDLVEVFGSDSSFEVVPLTHSDLDV-TILDTLEVLKKLKPDVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF +NA GA +A+ A+ I +YISTDYVFDG P E Sbjct: 60 AYVRVDDAELYPEKAFQVNAIGALNVARVAEEIDAVNVYISTDYVFDGSKGEPYTEEDIP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK AGE +Y+ + I+R A +Y S G NF+ M++ AK EI Sbjct: 120 NPINVYGLSKYAGEIFTKNYSRKHYIIRVASLYGKAGASGKGGNFVEFMVQKAKRGEEIR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF--- 230 VV DQF +PT +AR + ++ E G++HM DG SW +F + IF Sbjct: 180 VVDDQFMSPTYTKDVARTLKKLLELKPEF------GVYHMVNDGF-CSWYEFTKAIFEIL 232 Query: 231 -WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 WE R ++ R+ A RP +S L +L +++ W+ ++ L Sbjct: 233 GWEVDVRPIKSDELKRL--------AKRPRFSALRNKRLEGL-GLKMRPWRSALKEYL 281 >gi|308234498|ref|ZP_07665235.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] gi|328944091|ref|ZP_08241556.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] gi|327492060|gb|EGF23834.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] Length = 309 Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/259 (34%), Positives = 131/259 (50%), Gaps = 9/259 (3%) Query: 33 DIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 D+D+ + ++ P D++IN AA T VD E AFS NA+G +A+ Sbjct: 49 DLDISDYEAVRAYIADRDPYDLVINGAAMTNVDGCEQHEAAAFSANAQGPLNLARICAEQ 108 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 G + +STDYVF G P E P++ YG++KLAGE V + ++RTAW+Y Sbjct: 109 GAKLVQVSTDYVFSGTEARPRTEDDYPCPISAYGRTKLAGEALVLAQNPKSFVVRTAWLY 168 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 G NF+ +M+ L K +ISVVCDQ G PTSA +A I++IA T GI+ Sbjct: 169 GYVGKNFVQTMIGLGKTHDQISVVCDQMGNPTSANDLAYEILRIAQ-------TQSYGIY 221 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 H+T + G SW DFA I + + + + + P A RP YS L+ + LA T Sbjct: 222 HVTNE-GTCSWFDFASAIMKHAQLACKVVACTSQEYKRMNPQAAQRPCYSSLENAHLAQT 280 Query: 272 HNIRISTWKEGVRNILVNI 290 + W + + + +I Sbjct: 281 IGNEMRPWSDALASYFEHI 299 >gi|23504820|emb|CAD49093.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis] Length = 278 Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 145/291 (49%), Gaps = 22/291 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ + IN G+ +AKA +YISTDYVF+G +D+ Sbjct: 63 VDMAEDEGKELNYKINVTGSENVAKATAKYCATLVYISTDYVFNGDLPVGKEWQVDD--Q 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV D Sbjct: 121 PDPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A ++ + G +H++ D +W DFA + ++ Sbjct: 181 QHGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEVLKDTN-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +KV + + Q+P KA RP S + K A I TW+E + IL Sbjct: 233 ----TKVLPVDSSQFPAKAKRPFNSTMSLDK-AKATGFVIPTWQEALEGIL 278 >gi|124514413|gb|EAY55926.1| DTDP-4-dehydrorhamnose reductase [Leptospirillum rubarum] Length = 288 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 22/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG+ GQ+ L C +++R+ RPD + P+ S DV+IN AAY Sbjct: 1 MRIGVIGSRGQLGADLCLNCSPSDKVVRLDRPDFEFDNPEHLTKID-DLSLDVLINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT----PIDEFS 116 VDKAEDE ++AF +NA+ IA+ GI I STDYVF + P+ E Sbjct: 60 NDVDKAEDEIDLAFRLNAQAPSRIAEYCQKKGIRFITFSTDYVFGEFGKNIPQHPLREED 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERRE 171 P+++YG SK AGE V + + +++RT +Y S NF+ ML+L K + Sbjct: 120 EALPISVYGVSKWAGERIVLNRNPDALVIRTCGLYGHHRGSHLKKNFVDLMLQLGKGDQT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ TPTS +++ ++ I+ S G++HMT + G SW +FA+ IF Sbjct: 180 LRVVSDQVVTPTSTWELSVNTLK----FIQCSPRG--GLYHMTNE-GQCSWFEFAQAIF- 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + + K+Y KA RP+YS L K+ + I WK + L Sbjct: 232 ---QLKGLTPDLRPVSQKEYGAKARRPSYSVLSKEKIGK-YGISFQPWKSALSQYL 283 >gi|225868703|ref|YP_002744651.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus] gi|225701979|emb|CAW99538.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus] Length = 282 Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 141/286 (49%), Gaps = 18/286 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQVKPSLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPTN 119 VD AE+E + + +IN G IAKA + G +YISTDYVFDG + E + Sbjct: 63 VDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGQKPAGQEWLETDTPD 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P YG++K GE V YT + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 123 PQTAYGRAKRLGELAVERYTKQFYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQH 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGG 238 G PT +A + +A N G +H++ D +W DFA I E+ Sbjct: 183 GRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETG---- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E + Sbjct: 233 --VEVVPVDSSAFPAKAKRPFNSTMNLDK-AKATGFVIPTWQEALE 275 >gi|315608649|ref|ZP_07883630.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae ATCC 33574] gi|315249688|gb|EFU29696.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae ATCC 33574] Length = 295 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 145/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L++ +D I + +D+ + II Sbjct: 1 MNILVTGANGQLGNELQLAAKGSKDHYIFTDVCDNYQKLDITSLEAVRKMVGDNDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +A A +G I++STDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGEIVETLNATAPEHLAVAMKEVGGLLIHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P IYG +KL GE+K+ + ++I+RTAW+YS +G NF+ +M+ L K + ++ V Sbjct: 121 DLKGTPTGIYGLTKLHGEQKIKATEAKHIIIRTAWLYSEYGKNFVKTMMHLTKTKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N + GI+H + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLANVIFDIVENRKYEGHS---GIYHFSNE-GVCSWYDFARKI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G ++ + ++P+ RPAYS LD +K+ T I I W + + + Sbjct: 234 IAGNTDCEILPCHSDEFPSPVKRPAYSVLDKTKIKETFGITIPYWTDSLEKCM 286 >gi|217966753|ref|YP_002352259.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724] gi|217335852|gb|ACK41645.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724] Length = 278 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 150/287 (52%), Gaps = 15/287 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G G + Q QD ++I + DI++ + K+ + PD++I+PAA Sbjct: 1 MKVLITGAGGFLGQYFVKE-FQDHDVIPLTHKDINI-EDKNTIEKIIELKPDLVIHPAAI 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + D E +P++A+ +NA G IA A + IP IYISTDYVF G +P EF NP Sbjct: 59 RSPDICERDPDLAWKVNALGTKHIAIACSILDIPLIYISTDYVFSGDKNSPYTEFDTPNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG++KL GE V + Y I+RT++V+ +G+N + R KE +EI + F Sbjct: 119 INVYGRTKLQGELFVKEFCEKYFIIRTSYVFGEYGNNAFTQIYRSLKEGKEIYLSNYHFA 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 + T A + R + ++ S T L G +H+ + G ++ DFA W+ AE P Sbjct: 179 SCTYAGDLVRKVKEL-------SFTKLYGTYHI-VNKGIITRYDFA----WKVAEIFNLP 226 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 K+ ++ ++ + A RP YS L L H + ++E ++ I Sbjct: 227 KDKIIKLTSENFNQPAPRPLYSVLRNYVLELYHMDDMEHYEEILKKI 273 >gi|332974435|gb|EGK11359.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330] Length = 289 Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ + + + E+I +D+ K A+ +F PDVIIN A Y Sbjct: 1 MRILLTGANGQVGRCIKQQKPEHWEMIAADSNTLDITDAKAVANMVSNFEPDVIINAAGY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ AE + E F++NAEG +A+AA GI I++S+DYVFDG R P E TNP Sbjct: 61 TNLEAAECDKEHVFAVNAEGTRILAEAAARAGIRFIHLSSDYVFDGQKRMPYTENDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC--DQ 178 L+ Y KSKLAGE S +I+R++WV+S G N + R+ ++ SV D+ Sbjct: 121 LSTYAKSKLAGELLALSSNPASIIVRSSWVFSEHGDNRNNFVKRVMEQALAGSVATPSDK 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +AR +I +A T+ RGI+H D V+ +FA+ + Sbjct: 181 IGCPTYAGDLARLMINLAQ-----CQTAPRGIYHYCGDKA-VNRLEFAQTVVKMIQAVRP 234 Query: 239 PYSKVYRIFTKQYPTKAH--RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I P H RP YS L C K+ S W+ +++++ Sbjct: 235 LETTVVEI---PAPENEHTPRPPYSVLSCDKI-RALGYEPSDWQSALKHVV 281 >gi|322411500|gb|EFY02408.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 284 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 146/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G IYISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLIYISTDYVFDG--NKPVGQEWLETDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV D Sbjct: 121 PDPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N G +H++ D +W DFA+ I Sbjct: 181 QHGRPTWTRTLAEFMCYLAEN------QKAFGYYHLSNDAKEDTTWYDFAKEIL------ 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 229 KGKAVEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALKEF 277 >gi|313890580|ref|ZP_07824208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pseudoporcinus SPIN 20026] gi|313121097|gb|EFR44208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pseudoporcinus SPIN 20026] Length = 284 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 148/287 (51%), Gaps = 20/287 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + + + + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERNEDYVAVDVAEMDITNEEMVDQVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AEDE + + +IN +G IAKA +YISTDYVFDG ++T E+ T+ Sbjct: 63 VDAAEDEGKALNQAINVDGTENIAKACQKYDATLVYISTDYVFDG-TKTVGQEWFETDIP 121 Query: 120 -PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GEE V Y+ Y I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYSKKYYIIRTAWVFGNYGKNFVFTMQNLAKTHPKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT +A + +A N G +H++ D +W DFA+ I ++ Sbjct: 182 FGRPTWTRTLAEFMCYLAEN------NKAFGYYHLSNDSQEDTNWYDFAKEILKDTDVEV 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + +P KA RP S ++ K A I W++ ++ Sbjct: 236 VP------VDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPMWQDALQ 275 >gi|28492996|ref|NP_787157.1| dTDP-4-dehydrorhamnose reductase [Tropheryma whipplei str. Twist] gi|28572206|ref|NP_788986.1| polysaccharide biosynthesis protein [Tropheryma whipplei TW08/27] gi|28410337|emb|CAD66723.1| putative polysaccharide biosynthesis protein [Tropheryma whipplei TW08/27] gi|28476036|gb|AAO44126.1| dTDP-4-dehydrorhamnose reductase [Tropheryma whipplei str. Twist] Length = 287 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/264 (36%), Positives = 151/264 (57%), Gaps = 16/264 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +KCL+ G G + + + S+ + V + ++D+ ++A + + D++IN AAY Sbjct: 3 LKCLITGGGGMLGRDIRSVFPESVALTH---DELDITD--EYAVLDAARNKDLLINCAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE A+++N GA A+AKAA I ++ISTDYVF G + P E P +P Sbjct: 58 TQVDAAESNAAKAYAVNEAGARAVAKAAARRSIRVVHISTDYVFSGTAIRPYPEDHPHSP 117 Query: 121 LNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L++YGKSK AGE+ V Y+ I+RTAW+Y +G+NF+ S+L+ + + ++VV DQ+ Sbjct: 118 LSVYGKSKAAGEKAVLEEYSKGSFIIRTAWLYGQYGNNFVKSILKACRTQDIVTVVNDQY 177 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +L +A+ I L+ SD G++H T + G +W DFA + +A G Sbjct: 178 GQPTWSLDLAKQI-----KLLAESDAPC-GVYHGT-NSGKTTWFDFAGKV---AALGGYD 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL 263 ++ I + Q+ A RP YSCL Sbjct: 228 PKRIIPISSAQFVRPARRPGYSCL 251 >gi|94987507|ref|YP_595440.1| dTDP-4-dehydrorhamnose reductase [Lawsonia intracellularis PHE/MN1-00] gi|94731756|emb|CAJ55119.1| dTDP-4-dehydrorhamnose reductase [Lawsonia intracellularis PHE/MN1-00] Length = 291 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 17/282 (6%) Query: 7 GNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 GN G + +SL C+Q + ++ +GR D D+L+P +++ SP+ I N A+T VD Sbjct: 11 GNTGLLGKSLVR-CLQQKNWDVHTLGREDGDILQPDFLSNYIDKCSPNAIFNTIAWTQVD 69 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 AE A IN + I STD+VFDG P E PL++Y Sbjct: 70 LAETHSNDALLINRTLPSLLGTILKGTSTHLIQFSTDFVFDGTKNVPYVEEDVPYPLSVY 129 Query: 125 GKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G SKLAGE+ + NY I+RT+W++ NF+ ++L LAK + + VV DQ G+PT Sbjct: 130 GSSKLAGEQAILQLKLENYSIIRTSWLFGPGRKNFIQTILELAKTKNFLHVVHDQIGSPT 189 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 +A A I +L+EN +GIFH+ A+ G SW +FA E+ + + Sbjct: 190 YTPDLAEASI----SLVENKG---KGIFHI-ANSGQASWCEFAA----EAIRQANLSCTI 237 Query: 244 YRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I T ++ A RPAYS L+C + I I W + +R Sbjct: 238 QGISTNEWGKNIAKRPAYSVLNCERYRQITGISIRPWPQALR 279 >gi|251782163|ref|YP_002996465.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390792|dbj|BAH81251.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 284 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWLETDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV D Sbjct: 121 PDPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPTWTRTLAEFMCYLAEN------QKAFGYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALKEF 277 >gi|223933259|ref|ZP_03625249.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 89/1591] gi|330832509|ref|YP_004401334.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis ST3] gi|223898073|gb|EEF64444.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 89/1591] gi|329306732|gb|AEB81148.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis ST3] Length = 283 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ + IN G+ +AKAA +YISTDYVF+G +D+ Sbjct: 63 VDMAEDEGKELNYKINVTGSENVAKAAAKYCATLVYISTDYVFNGDLPVGKEWQVDD--Q 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV D Sbjct: 121 PDPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A ++ + G +H++ D +W DFA I ++ Sbjct: 181 QHGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEILKDTN-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +KV + + Q+P KA RP S + K A I TW+E + Sbjct: 233 ----TKVLPVDSSQFPAKAKRPFNSTMSLDK-AKATGFVIPTWQEALE 275 >gi|306827611|ref|ZP_07460891.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes ATCC 10782] gi|304430174|gb|EFM33203.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes ATCC 10782] Length = 304 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/291 (32%), Positives = 147/291 (50%), Gaps = 22/291 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AA Sbjct: 20 LMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAA 79 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----E 114 YTAVD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 80 YTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVE 137 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++V Sbjct: 138 TDRPDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTV 197 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWES 233 V DQ G PT R + + L EN G +H++ D +W DFA+ I + Sbjct: 198 VNDQHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDK 251 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A +V + + +P KA RP S ++ K A I TWKE ++ Sbjct: 252 A------VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWKEALK 295 >gi|256380334|ref|YP_003103994.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] gi|255924637|gb|ACU40148.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] Length = 296 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/286 (32%), Positives = 150/286 (52%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPK--DFASFFLS--FSPDVIINP 57 LV G GQ+ Q L + V+ + + D D + + +FA++ + +P V++N Sbjct: 7 LVPGGRGQLGQDLLATGGRVRALSSAELDITDADAVADRVSEFAAWARAEGLAP-VVVNA 65 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD AE + + A ++NA G +A A +P +++STDYVF G + P + Sbjct: 66 AAYTAVDDAETDEDRALAVNALGPELLALACREHDVPLLHVSTDYVFPGDATAPYEPDDV 125 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P + YG++KLAGE + + + ++RTAWVY G NF+ +M RLA +R +SVV D Sbjct: 126 TGPRSAYGRTKLAGERRALAAWDRTWVVRTAWVYGAGGPNFVKTMARLAGQRESLSVVDD 185 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT + +A ++++A + + R + H T GG +W A +F E G Sbjct: 186 QRGSPTWSADLAAGLVELAAATTGPAAPAQR-VLHATG-GGETTWFGLARAVF---EELG 240 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V T+ +P A RPAYS L + + W+E + Sbjct: 241 LDPERVRPCGTEDFPRPAPRPAYSVLSPKAWESAGLTPLRPWREAL 286 >gi|21910057|ref|NP_664325.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS315] gi|28896245|ref|NP_802595.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes SSI-1] gi|21904248|gb|AAM79128.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS315] gi|28811496|dbj|BAC64428.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes SSI-1] Length = 284 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 146/288 (50%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 121 PDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TWKE ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWKEALK 275 >gi|323127015|gb|ADX24312.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 284 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 22/290 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWLETDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV D Sbjct: 121 PDPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A + +A N G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPTWTRTLAEFMCYLAEN------QKAFGYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----IEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALKEF 277 >gi|328954211|ref|YP_004371545.1| dTDP-4-dehydrorhamnose reductase [Desulfobacca acetoxidans DSM 11109] gi|328454535|gb|AEB10364.1| dTDP-4-dehydrorhamnose reductase [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 16/284 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G NG + + + + +++ +G ++D+ + P+V+IN AAY Sbjct: 1 MKIVLVGKNGLLGRECLLVLNRAHDLVALGSRELDITDAVQVEEAVRRYQPEVLINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPT 118 T VD AE E E+A+ +N G +A + G ++ISTD VFDG P E Sbjct: 61 TRVDAAEQERELAYRVNVVGPRNLAASLARHGGTLLHISTDSVFDGERPVPEPYGEDDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA--KERREISVVC 176 PL+ Y ++K+A E V ++Y+I+RTAWVY + G NFL +MLRLA + I VV Sbjct: 121 GPLSYYSQTKVASETVVKQELSHYIIVRTAWVYGLHGPNFLKTMLRLALSNPKPRIKVVN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG+ T + ++A + +I + +GI+H TA+G +W + A+Y R Sbjct: 181 DQFGSLTWSYRVAEQLARII-------EAGGQGIYHATAEGY-ATWFEVADYFL----RR 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G ++ T +Y T A RP S L+ +L + + WK Sbjct: 229 MGIEIQINPCTTAEYQTPAKRPKNSILENRRLKDQGLNLMRPWK 272 >gi|256830646|ref|YP_003159374.1| dTDP-4-dehydrorhamnose reductase [Desulfomicrobium baculatum DSM 4028] gi|256579822|gb|ACU90958.1| dTDP-4-dehydrorhamnose reductase [Desulfomicrobium baculatum DSM 4028] Length = 287 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 1 MKCLVI--GNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ V+ G G + Q+LS ++ Q + GR +++L + + +V+ N Sbjct: 1 MRSAVVLGGKTGLLGQALSLALTRQGWAVHAPGRDELNLFERPAVEDYLARTKAEVLFNT 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AYT VD+AEDEP A +N + + KA + G+P ++ STD+VF G +P Sbjct: 61 VAYTKVDQAEDEPAEASRLNRQLPLILGKAVQAAGVPMVHYSTDFVFSGKKTSPYGPGDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P ++YG++KL GE ++ S N +I+RT+W++ +NF+ +L LA R E+SVV Sbjct: 121 TAPCSVYGQTKLQGERELMSLGLPNLLIIRTSWLFGPCKTNFVTRILELAASRPELSVVH 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+P+ +A + T GIFH+ A+ G SW + A A R Sbjct: 181 DQIGSPSY-------TPDLAAGSLALLATGATGIFHL-ANAGQASWCELA-----TEAVR 227 Query: 237 GGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + ++ I + +YP KA RPAYS LD I W + +R L Sbjct: 228 GADLACRIKPIPSSEYPQKACRPAYSVLDLGAFTAATGIAPRPWLQALREFL 279 >gi|15679780|ref|NP_276898.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622923|gb|AAB86258.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter thermautotrophicus str. Delta H] Length = 280 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/263 (36%), Positives = 142/263 (53%), Gaps = 14/263 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G++G + L + + E++ G DI L+ PD +++ AA+ Sbjct: 1 MKILITGSSGMLGSDLVDILSRRHEVVTSGSLDIRDLE--GVMELLRETRPDAVVHAAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ +N G IA AA ++G +YISTDYVFDG EF NP Sbjct: 59 TDVDCAETERDKAYQVNVLGTRNIAAAASAVGSSILYISTDYVFDGEKGDGYLEFDEPNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YGK+K GE V + + I+RT+W++ G NF+ +M+ LA+ EISVV DQ+G Sbjct: 119 LNFYGKTKYLGEVSVRQLSERFYIVRTSWLFGRNGRNFVGTMVELAERGHEISVVDDQYG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A AI NL+E G++H+T + G SW +FA IF E G Sbjct: 179 SPTYTRDLAAAI----GNLLER---PAYGVYHLT-NSGQCSWYEFAIDIFNEL----GME 226 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL 263 + + + ++P A RP++S L Sbjct: 227 VCLKPVKSHEFPRPARRPSFSVL 249 >gi|325002442|ref|ZP_08123554.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Pseudonocardia sp. P1] Length = 278 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 154/292 (52%), Gaps = 23/292 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 M+ V+G NGQ+ ++L++ V + R G L A FS DV+ + AA Sbjct: 1 MRACVLGANGQLGRALTAALPDAVALTRDG-----LDVGDAAAVAAFDFSGVDVVFDAAA 55 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE +P A+ +NA G +A AA G +++ST+YVFDG + P+ E +P Sbjct: 56 YTAVDRAETDPAAAWRVNALGPAYLAAAAARYGFTLVHVSTEYVFDGTAPGPMPEDTPLA 115 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK AGE V + +V++RT+WV G NF+ +M RLA++ +VV DQ Sbjct: 116 PLGVYGASKAAGELAVRAGAPRHVVVRTSWVAGD-GGNFVATMARLARDGVSPAVVDDQV 174 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A + S +G++H+T DG PVSW A +F A G Sbjct: 175 GRPTFAPDLA--------AALVALAGSGQGVYHVTGDGEPVSWHGVAGEVF---ARCGRD 223 Query: 240 YSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T +Y P A RPA S LD S+ A I + W++G+ L Sbjct: 224 PADVRAVSTAEYAADKPHLARRPANSVLDLSR-ATGAGISMPAWRDGLDRYL 274 >gi|315231850|ref|YP_004072286.1| dTDP-4-dehydrorhamnose reductase [Thermococcus barophilus MP] gi|315184878|gb|ADT85063.1| dTDP-4-dehydrorhamnose reductase [Thermococcus barophilus MP] Length = 283 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 147/298 (49%), Gaps = 32/298 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFL--SFSPDVIINPA 58 M+ VIG NGQ+ L + + E I + D+D+ DF S + PDVIIN A Sbjct: 1 MRVAVIGANGQLGTDLVEVFGE--EAIPLTHKDLDV---TDFGSLKILKELKPDVIINTA 55 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF +NA GA +AK A+ I +YISTDYVFDG P E Sbjct: 56 AYVRVDDAELYPEKAFQVNAIGALNVAKIANEIDAVNVYISTDYVFDGTKGKPYIEEDVP 115 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK AGE +Y+ Y I+R A +Y S G NF+ M++ AK+ I Sbjct: 116 NPINVYGLSKYAGEIFTKNYSGRYYIIRVASLYGKAGASGKGGNFVEFMIQKAKKGENIR 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF--- 230 VV D F +PT +AR + + E G++HM + G SW +F IF Sbjct: 176 VVKDMFMSPTYTKDVARTLKKFLELKPE------FGVYHMVNE-GYCSWYEFTRAIFEIL 228 Query: 231 -WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 WE + S++ R+ A RP S L KL +++ W+E + L Sbjct: 229 GWEVGVKPIKSSELKRL--------AKRPQLSALRNEKLEKL-GLKMRHWREALGEYL 277 >gi|332294914|ref|YP_004436837.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM 14796] gi|332178017|gb|AEE13706.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM 14796] Length = 277 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 157/289 (54%), Gaps = 18/289 (6%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +++G+NGQ+A+ +++ +VE++ + +D+ + PDV++N AA Sbjct: 1 MKAILLGSNGQLAKEFINNSSNFNVELVSFTKDMLDITNFFELKEAIKKSMPDVVLNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE E A+ +NA G +A ++ ++ STDYVFDG+ P + N Sbjct: 61 YNLVDKAESNWEAAYRVNALGPRNLAVLSNEFNYILVHFSTDYVFDGVKSKPYLIYDEPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKL+GE +++S + Y ++RT+WV+ ++F ++ +K + + VVCDQF Sbjct: 121 PISVYGRSKLSGEREISSLCSKYYVIRTSWVFGDGPNSFPRKLIEWSKGKDNLKVVCDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PTSA +A + N+ GI+H+T + G S ++A++IF + Sbjct: 181 SSPTSARYLASKTMYTIRNMP-------YGIYHIT-NSGYCSRFEWAKFIF----DFLKI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 K+ + + ++ T A RP +S LD L + + WK+ N L+ Sbjct: 229 DIKITPVSSDEFTTPAKRPPFSVLDNFPLNSDED-----WKDSTINYLL 272 >gi|332523419|ref|ZP_08399671.1| dTDP-4-dehydrorhamnose reductase [Streptococcus porcinus str. Jelinkova 176] gi|332314683|gb|EGJ27668.1| dTDP-4-dehydrorhamnose reductase [Streptococcus porcinus str. Jelinkova 176] Length = 285 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 20/287 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSKGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVDQVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-- 119 VD AE+E + + IN +G IAKA +YISTDYVFDG ++T E+ T+ Sbjct: 63 VDAAEEEGKALNQVINVDGTENIAKACQKYDATLVYISTDYVFDG-TKTVGQEWFETDIP 121 Query: 120 -PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GEE V Y+ Y I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYSKKYYIIRTAWVFGNYGKNFVFTMQNLAKTHSKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT +A + +A N G +H++ D SW DFA+ I ++ Sbjct: 182 FGRPTWTRTLAEFMCYLAEN------NKAFGYYHLSNDSKEDTSWYDFAKEILKDTDVEV 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 P + + +P KA RP S ++ K A I W++ ++ Sbjct: 236 VP------VDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPMWQDALQ 275 >gi|296123526|ref|YP_003631304.1| dTDP-4-dehydrorhamnose reductase [Planctomyces limnophilus DSM 3776] gi|296015866|gb|ADG69105.1| dTDP-4-dehydrorhamnose reductase [Planctomyces limnophilus DSM 3776] Length = 302 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 24/301 (7%) Query: 5 VIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++G GQ+A L + D + +GR D+D+ + P ++IN AA T Sbjct: 7 ILGGQGQLAFELQCLLAPDSGRSLSILGREDLDVTNAAQVDAVLSGIHPQIVINCAAQTQ 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----DGLSRTPIDEFSPT 118 VD AE E FSINA GAG I + + +YISTD+VF D P E Sbjct: 67 VDVAESTSENTFSINATGAGHIGRWCAANRAKLVYISTDHVFGQTIDRAHARPWRETDQP 126 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAKERREISV 174 P+++Y +SKLAGE+ + V++RT +Y + NF+ +MLRLA++R + V Sbjct: 127 QPVSVYARSKLAGEQATLEACPHSVVVRTCGLYGQRPAKGKGNFVQTMLRLAQQRPVLKV 186 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIE----NSDTSLRG-IFHMTADGGPVSWADFAEYI 229 V DQ+ TP+SA +A+AI + L++ N T+L I+H+T + G +WA A I Sbjct: 187 VDDQWCTPSSAQDVAQAIRSL---LVDPDAFNPKTNLTSRIWHIT-NTGSTTWAQLAREI 242 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 F G ++V I T ++ AHRP YS LD S+ ++ + +W+E + L Sbjct: 243 F----SLQGLTTEVIPITTAEFNAPAHRPGYSVLDTSRFHQSYGA-LPSWQEALATYLQR 297 Query: 290 I 290 + Sbjct: 298 L 298 >gi|14590335|ref|NP_142401.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus horikoshii OT3] gi|3256820|dbj|BAA29503.1| 290aa long hypothetical dTDP-4-dehydrorhamnose reductase [Pyrococcus horikoshii OT3] Length = 290 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/297 (34%), Positives = 148/297 (49%), Gaps = 26/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG NGQ+ L + D E++ + D+D+ P+ PDV+IN A Sbjct: 4 MRIAIIGANGQLGTDLVEVFGNDPEFEVVPLTHKDLDVTIPESL-KVLKEIKPDVLINTA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++NA GA +A+ A+ I +YISTDYVFDG P E Sbjct: 63 AYVRVDDAELYPEKAFAVNAIGALNVARIANEIDAVNVYISTDYVFDGEKGEPYTEEDVP 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK GE +Y+ + I+R A +Y S G NF+ ++ AK E+ Sbjct: 123 NPINVYGVSKYTGEIFTRNYSPKHYIIRVASLYGKAGASGKGGNFVEWVIEKAKHGEELK 182 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIF 230 +V DQF +PT +AR + + LR G++HM +G SW +F E IF Sbjct: 183 IVDDQFMSPTYTKDVARTLKEF---------LKLRSEFGVYHMVNEGF-CSWYEFTEAIF 232 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G ++ I + + A RP +S L KL +R+ W+E + L Sbjct: 233 ----DVLGWNVEIKPIKSNELNRLAKRPRFSALKNEKLEKI-GLRMRHWREALEEYL 284 >gi|19745868|ref|NP_607004.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS8232] gi|19748019|gb|AAL97503.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS8232] Length = 284 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 121 PDPKTEYGRTKRLGELAVEGYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 275 >gi|297570696|ref|YP_003696470.1| dTDP-4-dehydrorhamnose reductase [Arcanobacterium haemolyticum DSM 20595] gi|296931043|gb|ADH91851.1| dTDP-4-dehydrorhamnose reductase [Arcanobacterium haemolyticum DSM 20595] Length = 282 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/282 (33%), Positives = 146/282 (51%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M +V+G G + L + +D +R V DID+ K + + DV++N AA Sbjct: 1 MTWMVVGAKGMLGTDLVARIKEDGHDVRAVDIDDIDITKMD--SVEQVVQGVDVVVNCAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE+ AF +NA G +A+ IG ++ISTDYVF G TP E +P + Sbjct: 59 FTAVDPAEENEGTAFRVNATGPANLARQCAKIGARLVHISTDYVFRGDGETPWTEEAPMD 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K AGE V +YTN+++I+RTAW+Y FG+ F +M+RL++ + VV D+ Sbjct: 119 PVSAYGRTKAAGEWAVRTYTNDFLIVRTAWLYGKFGNCFPKTMVRLSETHETLKVVVDEV 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I++ L++ S G++H T+ G SW F + I G Sbjct: 179 GQPTWTVDLADLIVR----LVDAKAPS--GVYHGTSQ-GQTSWNGFTKEIM---RAVGKS 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V+ + A RP++S L L I W E Sbjct: 229 PDMVHETTAAAFDRPAKRPSFSALGHDALTAIGVEPIGEWNE 270 >gi|15674829|ref|NP_269003.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes M1 GAS] gi|71910415|ref|YP_281965.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS5005] gi|13621962|gb|AAK33724.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes M1 GAS] gi|71853197|gb|AAZ51220.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS5005] Length = 284 Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDH 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 121 PDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 275 >gi|94990166|ref|YP_598266.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10270] gi|94543674|gb|ABF33722.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10270] Length = 294 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 20/290 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AA Sbjct: 10 LMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAA 69 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---LSRTPIDEF 115 YTAVD AEDE + + +IN G+ IAKA G +YISTDYVFDG + + ++ Sbjct: 70 YTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETD 129 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV Sbjct: 130 RP-DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVV 188 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESA 234 DQ G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 189 NDQHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA 242 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 243 ------VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 285 >gi|94988287|ref|YP_596388.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS9429] gi|94992163|ref|YP_600262.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS2096] gi|94541795|gb|ABF31844.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS9429] gi|94545671|gb|ABF35718.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS2096] Length = 304 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/290 (32%), Positives = 149/290 (51%), Gaps = 20/290 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AA Sbjct: 20 LMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAA 79 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---LSRTPIDEF 115 YTAVD AEDE + + +IN G+ IAKA G +YISTDYVFDG + + ++ Sbjct: 80 YTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETD 139 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV Sbjct: 140 RP-DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVV 198 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESA 234 DQ G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 199 NDQHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA 252 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 253 ------VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 295 >gi|50913965|ref|YP_059937.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10394] gi|50903039|gb|AAT86754.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10394] Length = 284 Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 146/288 (50%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSP 117 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDR 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 121 PDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 275 >gi|297199643|ref|ZP_06917040.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sviceus ATCC 29083] gi|197713429|gb|EDY57463.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sviceus ATCC 29083] Length = 298 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 88/278 (31%), Positives = 143/278 (51%), Gaps = 8/278 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G G + Q + + Q E + + R +DL ++ P V++N AA+TA Sbjct: 8 LVTGAGGMLGQDVLARLAQSGERFVALDRKALDLTDADAVSAALEEHRPAVVVNCAAWTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + A +IN +G +A+A G +++STDYVF G ++ P E +PT P + Sbjct: 68 VDDAETREDEALAINGDGPRNLAEACARTGAVLLHVSTDYVFAGDAQEPYAEDAPTAPRS 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++KLAGE+ V YV+ RTAW+Y G NF+ +M++L + + VV DQ G P Sbjct: 128 AYGRTKLAGEKAVLGIERGYVV-RTAWLYGTGGPNFVKTMIKLEGVKDTLDVVDDQRGQP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A ++++ + + T+ G++H T + G +W F + IF G + Sbjct: 187 TWSADLAGLLVELGLGAL--AGTAPAGVYHGT-NSGETTWHGFTQEIF---RLLGADPDR 240 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V ++ + A RPAYS L + A + W+ Sbjct: 241 VRPTTSEAFVRPAPRPAYSVLGHGRFAEAGIEPLRDWR 278 >gi|94994085|ref|YP_602183.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10750] gi|94547593|gb|ABF37639.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10750] Length = 304 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 23 LITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 82 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTN- 119 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E+ T+ Sbjct: 83 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDC 140 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 141 PDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 200 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 201 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 252 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 253 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 295 >gi|71903247|ref|YP_280050.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS6180] gi|71802342|gb|AAX71695.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS6180] Length = 304 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 147/291 (50%), Gaps = 22/291 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AA Sbjct: 20 LMILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAA 79 Query: 60 YTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----E 114 YTAVD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E Sbjct: 80 YTAVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVE 137 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++V Sbjct: 138 TDRPDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFAMEQLAENHSRLTV 197 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWES 233 V DQ G PT R + + L EN G +H++ D +W DFA+ I + Sbjct: 198 VNDQHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDK 251 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 252 A------VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 295 >gi|85859801|ref|YP_462003.1| dTDP-4-dehydrorhamnose reductase [Syntrophus aciditrophicus SB] gi|85722892|gb|ABC77835.1| dTDP-4-dehydrorhamnose reductase [Syntrophus aciditrophicus SB] Length = 287 Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 92/287 (32%), Positives = 143/287 (49%), Gaps = 11/287 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ G + L + E+ P+ID+ LS PD+ +N A+ Sbjct: 1 MKILIFGHRGMLGSELMMRLQANHEVAGQDIPEIDITSYDACRQAILSIKPDLAVNATAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E E F++NA G G +A +GI ++ STDYVF+G +TP E +P Sbjct: 61 TDVDACETRREECFAVNALGVGHLALICRDMGIKLVHFSTDYVFNGRRKTPYAEEDFCDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKL GE+++ +++++RTAW+Y G NF+ ++L A+ + VV DQ G Sbjct: 121 LNVYGLSKLEGEKRLQEAGCDHLLIRTAWLYGKNGKNFVRAILARAETDPVLDVVDDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + ++ A+ LIE + GI+H+T + G +W +FA I S G Sbjct: 181 CPTYSADLSDAV----GFLIEGGHS---GIYHVT-NSGQCTWYEFACRILKSS---GILD 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + A R YS L+C K + W E + + L Sbjct: 230 VEVRPTTSDKLARPACRSPYSVLNCEKYFRDTGHAMRHWTEALNDYL 276 >gi|256397292|ref|YP_003118856.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM 44928] gi|256363518|gb|ACU77015.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM 44928] Length = 301 Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 14/282 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + L ++ + ++ + R ++D+ A+ D+++N AA Sbjct: 16 RWLVTGAGGMLGTDLVALLKAEPAAQVTALTRAELDVTDASAVAAAVAGH--DIVVNAAA 73 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N G ++A A + G + +STDYVFDG P E++ T+ Sbjct: 74 WTDVDGAETHEAQATAVNGGGVSSLASACAATGARLLTVSTDYVFDGKGEAPYGEYAATD 133 Query: 120 PLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N YG+SKL GE V A ++RTAW+Y G NF+ +MLRLA ER + VV DQ Sbjct: 134 PINAYGRSKLVGERAVLAVLPETGYVVRTAWLYGAHGPNFVRTMLRLAGERETLDVVDDQ 193 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A +I +A + + GI+H TA G SW A F E+ G Sbjct: 194 IGQPTWTGALAGQLIALAQ-----ASQAPAGIYHGTAS-GQTSWFGLARAAFEEA---GL 244 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + ++ A RP YS L + A + W+ Sbjct: 245 DPERVRPTTSDKFVRPAERPKYSVLGHDRWAEAGLPELGDWR 286 >gi|209559156|ref|YP_002285628.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes NZ131] gi|209540357|gb|ACI60933.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes NZ131] Length = 284 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYTA 62 Query: 63 VDKAEDEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTN- 119 VD AEDE + + +IN G+ IAKA G +YISTDYVFDG P+ E+ T+ Sbjct: 63 VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDG--NKPVGQEWVETDC 120 Query: 120 --PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV D Sbjct: 121 PDPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT R + + L EN G +H++ D +W DFA+ I + A Sbjct: 181 QHGRPT----WTRTLAEFMCYLTENQKAF--GYYHLSNDAKEDTTWYDFAKEILKDKA-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + +P KA RP S ++ K A I TW+E ++ Sbjct: 233 ----VEVVPVDSSAFPAKAKRPLNSTMNLDK-AKATGFVIPTWQEALK 275 >gi|146318950|ref|YP_001198662.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 05ZYH33] gi|146321158|ref|YP_001200869.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 98HAH33] gi|253752020|ref|YP_003025161.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis SC84] gi|253753845|ref|YP_003026986.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis P1/7] gi|253755279|ref|YP_003028419.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis BM407] gi|145689756|gb|ABP90262.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 05ZYH33] gi|145691964|gb|ABP92469.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 98HAH33] gi|251816309|emb|CAZ51938.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis SC84] gi|251817743|emb|CAZ55494.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis BM407] gi|251820091|emb|CAR46367.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis P1/7] gi|292558604|gb|ADE31605.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis GZ1] gi|319758387|gb|ADV70329.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis JS14] Length = 283 Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 22/288 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 VD AEDE E+ + IN G+ +AKA +YISTDYVF+G +D+ Sbjct: 63 VDMAEDEGKELNYKINVTGSENVAKATAKYCATLVYISTDYVFNGDLPVGKEWQVDD--Q 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV D Sbjct: 121 PDPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAER 236 Q G PT +A ++ + G +H++ D +W DFA + ++ Sbjct: 181 QHGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEVLKDTN-- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +KV + + Q+P KA RP S + K A I TW+E + Sbjct: 233 ----TKVLPVDSSQFPAKAKRPFNSTMSLDK-AKATGFVIPTWQEALE 275 >gi|29726012|gb|AAO88940.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 284 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 11/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTA 62 LV G+NG + + + D + I R ++D+ F +S +VIIN AA Sbjct: 3 LVTGSNGLLGSEIRRILGSD-KGIYTDRNELDVTDKNSIKKFLMSRKDIEVIINCAAGAN 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + E+ E I + +A+ A GI I+ISTDYVFDG P E TN L+ Sbjct: 62 AEYIEENSEWGRRITVDAPMYLAQEAKENGIKLIHISTDYVFDGDRNVPYIESDYTNGLS 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+ K GE+ V ++ I+RTAW++S +F+ +M+RL++ R ++VV DQ G+P Sbjct: 122 LYGRFKAEGEQAVLKNSDTCAIIRTAWLFSEQMKDFIGAMVRLSETRDSVNVVFDQVGSP 181 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A II IA+NL + + IFH+T + G SW D A I E K Sbjct: 182 TYVPDLASHIITIANNL----NVGEKEIFHVTNE-GVCSWYDIACQIMRELK----IDCK 232 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + +Y TKA RP YS LD K+ ++ I + + + L NI Sbjct: 233 VKPIRSSEYKTKAARPHYSVLDKKKVKERFSLEIRHYSDALSECLKNI 280 >gi|88604301|ref|YP_504479.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1] gi|88189763|gb|ABD42760.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1] Length = 282 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + +++C + ++ D+D+ K + PD+IIN AA Sbjct: 1 MKILITGANGQLGKDTTNLCRKYGHDVTAWTSKDLDITKYDVVTKTIQNLQPDIIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE E E AF +N G ++ AA+ + ++ STDY+F+G S P + Sbjct: 61 YNAVDLAETEYEKAFLVNGIGPKNLSLAANKVNASLVHYSTDYIFNGKSSRPYTIADHPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG+SKL GE++V + Y ++R +WV+ NF+ +L + + I+VV DQ Sbjct: 121 PLSRYGESKLLGEQEVMRHATRYYLIRVSWVFGSGNINFVKKVLEWSDKSNIITVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A+A + +LI+ T G++H T + G S DFA YI + G Sbjct: 181 ASPTYTHDLAKATL----DLIQ---TDQYGLYHCT-NTGHCSRFDFAAYILQQVGWSG-- 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + ++ T A RP +S LD L + +W++ L I Sbjct: 231 --ELIPGKSTEFETPATRPEFSALDNFGLKQVIGYNLPSWQDATERFLKEI 279 >gi|163748894|ref|ZP_02156146.1| dTDP-4-dehydrorhamnose reductase [Shewanella benthica KT99] gi|161331668|gb|EDQ02473.1| dTDP-4-dehydrorhamnose reductase [Shewanella benthica KT99] Length = 288 Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 157/292 (53%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG +GQ+AQ+L + + +GR D+D+ + + ++IIN AAYT Sbjct: 6 RALIIGKHGQLAQALIASKPNKIIATAMGRDDVDIGSLESIMAAIELTRAELIINTAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + + AFS+N +GAG IA AA I++STDYVF+G + + Sbjct: 66 QVDLAESQQDQAFSVNRDGAGNIALAAKMTQTRLIHLSTDYVFNGQQSKAYCIDDKPSAI 125 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKLAGE+ V A+ I+R++W+YS FG+NF+ +MLRL + ++SV+ DQ Sbjct: 126 NVYGASKLAGEQAVIAAEYEEACIVRSSWLYSPFGTNFVKTMLRLMTLQPKLSVIDDQTS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA ++ + I ++ L I+H + D G SW FA I + G Sbjct: 186 CPTSAFELGQFIWSLSQQ------AKLAPIYHWS-DTGTASWYQFALAIQDIALNLGKLD 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + I + Q+ + A RP +S LD + A+ + W+E + +L + Sbjct: 239 TRIPIEPISSSQFSSAASRPKFSLLDIT--ASRQIMTAKPWQENLTAVLQQL 288 >gi|15004825|ref|NP_149285.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC 824] gi|14994437|gb|AAK76867.1|AE001438_120 dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC 824] gi|325511269|gb|ADZ22904.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum EA 2018] Length = 239 Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 128/234 (54%), Gaps = 12/234 (5%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV++N AAYT VD E + AF +NA GA +A AA+ IG ++IS+DYVF G T Sbjct: 11 PDVVVNAAAYTNVDACETNEKKAFEVNAFGAKNLAIAAEEIGAKLVHISSDYVFSGEGNT 70 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P + +P ++YGKSK G++ V +++ Y I+R AWVY G NF+ +++ LAKE+ Sbjct: 71 PFKDEDKASPQSVYGKSKKMGDDFVKEFSSKYFIVRPAWVYGYKGKNFVYTIMELAKEKE 130 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++VV DQ G PT+ I I+++ T G+++ + G SW DFA Sbjct: 131 VVTVVNDQRGNPTNVEDIVYHILKLIV-------TDKYGVYNCSGH-GECSWYDFA---- 178 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E + S + + +Y +A RP+YS L+ L+ + WK+ ++ Sbjct: 179 CEIIKLSNIPSVIKPCSSNEYKRQAKRPSYSSLENKNLSLAVGDDMRYWKDALK 232 >gi|302556045|ref|ZP_07308387.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes DSM 40736] gi|302473663|gb|EFL36756.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes DSM 40736] Length = 291 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G + ++ + E ++ + R +D+ P+ PD+++N AA Sbjct: 1 MRWLVTGAGGMLGHDVARELTRRGEDVVALDRAALDITTPETVDRAVAGHRPDLVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPT 118 YTAVD AE + A IN EG +A+A + I++STDYVF G +RT P E Sbjct: 61 YTAVDDAETDEARALEINGEGPRLLARACAAHDARLIHVSTDYVFSGEARTDPYAEDHRP 120 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE V ++RTAW+Y + G+NF+ +M+ L R + VV D Sbjct: 121 APRTAYGRTKLAGERAVLEELPGRSAVVRTAWLYGVHGANFVRTMIGLEARRDTVDVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + +A I + L + G+FH T + G +W + A +F + G Sbjct: 181 QRGQPTWSADVAERIADLGVRLGPGA----HGVFHAT-NSGEATWYELAREVF---SLVG 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +P A RPAYS L + W+ + L I Sbjct: 233 ADPDRVRPTTSAAFPRPAPRPAYSVLAHRRWQRIGLPPARDWRSALHEALPRI 285 >gi|260592180|ref|ZP_05857638.1| dTDP-4-dehydrorhamnose reductase [Prevotella veroralis F0319] gi|260535814|gb|EEX18431.1| dTDP-4-dehydrorhamnose reductase [Prevotella veroralis F0319] Length = 302 Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 144/293 (49%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQSLS--SMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + S +D I + G +D+ + II Sbjct: 9 MNILVTGANGQLGNEMQIVSQKSKDKYIFTDVCDGYTKLDITNLEAIRKMVKDNDIKCII 68 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI +NA +A A + ++ISTDYVF G TP E Sbjct: 69 NCAAWTNVDKAETAGEIVEMLNAIAPENLAIAMKEVNGLLVHISTDYVFGGDPYNTPCKE 128 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++ILRTAW+YS FG NF+ +M+ L + ++ V Sbjct: 129 DMKGTPTGVYGLTKLHGEQKIQATGVKHIILRTAWLYSEFGHNFVKTMINLTATKPQLKV 188 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I + GI+H + + G SW DF I + Sbjct: 189 VFDQCGTPTYAGDLADAIYDIVE---QRKYEGNNGIYHFSNE-GVCSWYDFTIKI---AE 241 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + ++P+ RPAYS LD +K+ T I+I W++ ++ + Sbjct: 242 LVGNRNCDIQPCHSDEFPSPVTRPAYSVLDKTKIKETFGIKIPYWEDSLKKCI 294 >gi|294670852|ref|ZP_06735708.1| hypothetical protein NEIELOOT_02556 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307339|gb|EFE48582.1| hypothetical protein NEIELOOT_02556 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 197 Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 83/194 (42%), Positives = 109/194 (56%), Gaps = 5/194 (2%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 ++ISTDYVFDG P DE +PT P NIYG SKLAGE+ V + V++R +WV+ +G Sbjct: 2 LHISTDYVFDGAGGAPYDEAAPTAPQNIYGASKLAGEQAVLAACRRAVVMRASWVFGAYG 61 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 NF+ +MLRL +ER + +V DQ+G PT+A IA A+I I GI+H Sbjct: 62 QNFVKTMLRLGRERDSLGIVADQYGAPTAAADIAAALITIVRRHTPGQLAERAGIYHYC- 120 Query: 216 DGGP-VSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 G P SW +FAE IF E+A +G V I T YPT A RPA S LDC K+ Sbjct: 121 -GSPYASWFEFAETIFAEAAAQGVLAKIPAVKPIVTADYPTPAKRPADSRLDCGKIRAVF 179 Query: 273 NIRISTWKEGVRNI 286 I W + ++ Sbjct: 180 GIGPCDWHSALSDL 193 >gi|218885248|ref|YP_002434569.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756202|gb|ACL07101.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 293 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV+G G + Q+L + + + + GR D+++L ASF P VI N A Sbjct: 6 KALVLGGRTGLLGQALVRVLRESGWDALPTGRDDVNVLDSGALASFIERAEPAVIFNTVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ E A +N + +A+ + ++ STD+VF G TP + Sbjct: 66 WTQVDLAEEREEDATRLNRQLPTCLARMVRGTPMHLVHFSTDFVFSGRKGTPYTPEDTPD 125 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V +N ++RT+W++ NF+ +L + ++ E VV DQ Sbjct: 126 PASVYGATKLAGEQAVLQQCPDNACVVRTSWLFGPGRRNFVKVILDICHDKGEARVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT L +A +++A + GIFH+ A+ G SW + A E+ G Sbjct: 186 IGSPTYTLDLAAGSVKLA-------ELRATGIFHV-ANAGQASWCELAS----EAVNLAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV+ I ++ YP KA RP +S LD ++ I W + +R+ + Sbjct: 234 LPCKVHAIPSRDYPQKAQRPPFSVLDTARFTQMTGITPRPWPQALRDYI 282 >gi|120602749|ref|YP_967149.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris DP4] gi|120562978|gb|ABM28722.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris DP4] Length = 291 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 14/281 (4%) Query: 7 GNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + QSL ++ + + VGR D+D+L + A F SP + N A+T VD Sbjct: 12 GRTGLLGQSLVLALRNGGWDAVPVGRDDVDVLDAERLADFIDKASPQAVFNTVAWTQVDL 71 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE+ + A +N ++ + G+ +++STD+VF+G TP +P ++YG Sbjct: 72 AEEHEQEAAQLNRALPASLGRIVRGTGMHLVHLSTDFVFNGRKTTPYTTDDTPDPASVYG 131 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 +KLAGE + S +N ++RTAW++ NF+ ++L L + +I VV DQ G+PT Sbjct: 132 TTKLAGETALLSIAPDNCCVVRTAWLFGPGRRNFVQTILGLCAAKDDIQVVHDQTGSPTY 191 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 + +A +++A + G+FH+ + G SW + A E+ G + KV+ Sbjct: 192 TVDLAAGCVRLA-------ELRATGLFHVV-NAGQASWCELAS----EAVHLAGLHCKVH 239 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I +K +P KA RPAYS LD S+ I W + +R+ Sbjct: 240 AITSKDWPQKAARPAYSVLDTSRFTEVTGIVPRPWPQALRD 280 >gi|11095235|gb|AAG29801.1| dTDP-4-keto-6-deoxyhexose reductase [Streptomyces rishiriensis] Length = 288 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 13/264 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L + E ++ R D+D+ + + P I+N AA+ Sbjct: 4 RWLVTGAGGMLGRDLVRVLEALNEPVLAATRQDLDITDRFSVRAVVSRYRPTAIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A IN GA +A I +++STDYVFDG SR P E + T P Sbjct: 64 TRFHEAETSEAEAHLINGRGARELATICGDRSIRLVHLSTDYVFDGASRRPYAESAATGP 123 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++KLAGE+ V ++ I+RTAW+Y G+NFL M+RL + + + VV DQ+ Sbjct: 124 INAYGRTKLAGEQAVLELLPDDGTIVRTAWLYGRHGTNFLRKMVRLEQTHKTVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT ++ +A+ I+ + + G+FH T+ G +W DFA IF G Sbjct: 184 GQPTWSVDLAQQIVALVRH-------GASGVFHGTSS-GETTWYDFARMIF---RLLGAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL 263 ++ + + Q RP Y+ L Sbjct: 233 PGRIRPVRSDQIAGGELRPRYTVL 256 >gi|157413785|ref|YP_001484651.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9215] gi|157388360|gb|ABV51065.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9215] Length = 314 Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 153/299 (51%), Gaps = 10/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+ ++L + +I + R + ++L + S +PD I+N A+ Sbjct: 1 MKILITGSKGQLGRTLIKLKPTKAKIFAMNRNNFNMLDIPNCLKVIRSINPDWIVNCGAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--SRTPIDEFSPT 118 T VD AE E+A +N A AK +G + ISTDYVFDGL + P Sbjct: 61 TNVDLAESNKEVAMEVNYHAPKAFAKEMKDLGGRFLQISTDYVFDGLRPNMKPYTTNDKK 120 Query: 119 NPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PL IYG SK E E + TN +ILRT+W+ + FGSNFLL +L L + +EI VV Sbjct: 121 SPLGIYGISKAKAEDFIEDIFLGTNKGIILRTSWILAPFGSNFLLKILNLLLKNKEIKVV 180 Query: 176 CDQFGTPTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 DQ G+PT+ +A +I +NL + + GI H D G +W + A I F Sbjct: 181 NDQIGSPTNIYSLAEVCWKIIELNNLEIIFNENKNGILHW-QDNGQTNWYEIALKIRNFG 239 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++V I T YPT A RPA+S LDC+ + + W+ G+ I+ I Sbjct: 240 KEIDLINYNTQVTPISTFDYPTPAKRPAFSVLDCNSAKRVLDHKGIDWRCGLEKIMKQI 298 >gi|116625364|ref|YP_827520.1| dTDP-4-dehydrorhamnose reductase [Candidatus Solibacter usitatus Ellin6076] gi|116228526|gb|ABJ87235.1| dTDP-4-dehydrorhamnose reductase [Candidatus Solibacter usitatus Ellin6076] Length = 294 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 133/273 (48%), Gaps = 18/273 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +V G GQ+ L Q +I R +D+ P + ++ +V+ N AAY Sbjct: 4 RAVVFGAAGQLGIELVRELQQRRYTVISWDRAQVDITDPVAVENALANYDAEVVFNAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF +NA +A A ++ STDYVFDG +R P E PT+P Sbjct: 64 NQVDVAEKEPQAAFLVNALAVRNLALACRQADAQLVHFSTDYVFDGAARHPYVEEDPTHP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-----SNFLLSMLRLAKERREISVV 175 L Y SKLAGE +Y + +++RT+ V+ G NF+ MLRLA I VV Sbjct: 124 LGAYAVSKLAGELYAQAYLDRALVVRTSGVFGPGGLTTARGNFVELMLRLAASPNPIRVV 183 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT A +A I +L+E + G+FH+ G PVSW FA IF E Sbjct: 184 EDHVASPTFAPLLASRTI----DLVER---GIAGLFHI-GGGAPVSWFQFARLIF----E 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G + ++Y T A RP YS L +KL Sbjct: 232 AAGLKPTLLATNEREYRTPARRPKYSALSNAKL 264 >gi|221633639|ref|YP_002522865.1| dTDP-4-dehydrorhamnose reductase [Thermomicrobium roseum DSM 5159] gi|221156137|gb|ACM05264.1| dTDP-4-dehydrorhamnose reductase [Thermomicrobium roseum DSM 5159] Length = 281 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ L+ G +GQ+ ++L E+I +G + D+ P + P ++I+ AA+ Sbjct: 2 VRVLITGGHGQLGRALVRTAPAHTEVIALGAAECDVTDPFTVRAVLARVEPTLVIHCAAW 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E PE A+ +NA G IA A + + +ST+YVFDG P EF+ +P Sbjct: 62 TDVDGCERHPERAWRVNALGTQHIAAACAAAEAALVALSTNYVFDGEQDEPYHEFARPHP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLA EE V + + I+RTA +Y G NF+ ++LRLA+E+ + +V DQ+G Sbjct: 122 LSVYGASKLAAEEVVRALCPRHYIVRTAMLYDAHGRNFVTTVLRLAREQPRLRMVADQYG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A+AI Q+ G +H+ + G SW ++A + E+ G P Sbjct: 182 SPTFVDDLAKAIWQLVAQ-------PAYGTYHLV-NAGRASWYEWAVAVL-ETLGLGVP- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I Q+ +A RP + + S A I + W++ + L + Sbjct: 232 --VEPIPASQF-RRAARPPRNGVLTSLAAPALGIVLPDWRDALTRCLAPL 278 >gi|319942628|ref|ZP_08016936.1| hypothetical protein HMPREF9464_02155 [Sutterella wadsworthensis 3_1_45B] gi|319803807|gb|EFW00739.1| hypothetical protein HMPREF9464_02155 [Sutterella wadsworthensis 3_1_45B] Length = 270 Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/240 (37%), Positives = 126/240 (52%), Gaps = 15/240 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D IIN AAYTAVD AED A ++NA A K GIP ++ISTDYVFDG +R P Sbjct: 38 DCIINCAAYTAVDDAEDHSRDAIAVNA----AAPKYLTDTGIPIMHISTDYVFDGRARQP 93 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKER 169 + S T PL++YG+SK GE + + I+RT+ +YS +F +ML+L ER Sbjct: 94 YEVDSQTAPLSVYGRSKQMGEAALLTSKACGCIIRTSRLYSPTAGTRSFFQTMLQLLSER 153 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + + VV DQF PT A +A A++++ ++ + + H T + G SW FA I Sbjct: 154 QSLGVVSDQFSAPTLAEDLADALVEL---YLQGAHLRSMQVLHFT-NTGETSWLGFASAI 209 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ER G K+ I QYP KA RP YS L L I+ +W++ + V Sbjct: 210 ----QERIGTTCKLEAIPAVQYPAKARRPHYSVLSLQSL-QAWRIKPRSWQDALTEACVQ 264 >gi|14521386|ref|NP_126862.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus abyssi GE5] gi|5458604|emb|CAB50092.1| dTDP 4-dehydrorhamnose reductase (dTDP-L-rhamnose synthetase) [Pyrococcus abyssi GE5] Length = 283 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 24/294 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFL--SFSPDVIINPA 58 M+ VIG NGQ+ L + + E I + R D+D+ DF S + P+VIIN A Sbjct: 1 MRVAVIGANGQLGTDLVEVFGE--EAIPLTRKDLDVT---DFESLKILKELKPEVIINTA 55 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF +NA GA +A+ A+ IG +YISTDYVFDG P E Sbjct: 56 AYVRVDDAELYPEEAFKVNAIGALNVARIANEIGAINVYISTDYVFDGAKGEPYTEEDIP 115 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK GE +Y+ Y I+R A +Y G NF+ +++ A + E+ Sbjct: 116 NPINVYGASKYIGEIFTRNYSKKYYIIRVASLYGKAGARGKGGNFVEWVIKKANKGEELR 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQF +PT +AR + ++ G++HM + G SW +F IF Sbjct: 176 IVNDQFMSPTYTKDVARTLRELL------RLRPSFGVYHMVNE-GYCSWYEFTRAIF--- 225 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +V I + + A RP +S L KL +++ WKE + L Sbjct: 226 -EILGWDVRVKPINSSELKRLAKRPKFSALKNEKLEKI-GLKMKHWKEALGEYL 277 >gi|258404444|ref|YP_003197186.1| dTDP-4-dehydrorhamnose reductase [Desulfohalobium retbaense DSM 5692] gi|257796671|gb|ACV67608.1| dTDP-4-dehydrorhamnose reductase [Desulfohalobium retbaense DSM 5692] Length = 293 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 14/283 (4%) Query: 7 GNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + Q+L ++ Q + +GR D+D+ + P + N AYT VD Sbjct: 15 GKRGLLGQALVQTLQEQGWRVCALGREDVDVDSQEALTDLLSRLRPGAVFNTVAYTQVDA 74 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE + + A +N + +A S IP ++ STD+VF G RTP P +YG Sbjct: 75 AETDVQNARLLNQSFPCRLGRALPSPEIPVVHFSTDFVFGGDQRTPYTPLDTPRPGTVYG 134 Query: 126 KSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 K+KL GE+ + I+RTAW++ NF+ ML+L+ E + VV DQ G+PT Sbjct: 135 KTKLEGEKALLQLDLRRLFIVRTAWLFGPGKENFVSKMLKLSAEHSRLRVVHDQIGSPTY 194 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 L +A + +L+E + G++H+ A+ G SW + A E+ G +V Sbjct: 195 TLDLAAYTL----HLLEKTPA---GLYHI-ANSGRASWCELAS----EALALYGSSCQVE 242 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I +YP +A RPAYS LD + + I+ W + +R+ + Sbjct: 243 AITAAEYPQQAVRPAYSVLDNTAFSQATGIKPRPWPQALRDYI 285 >gi|116754263|ref|YP_843381.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta thermophila PT] gi|116665714|gb|ABK14741.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta thermophila PT] Length = 281 Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/285 (37%), Positives = 141/285 (49%), Gaps = 13/285 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ L + ++ + D+ PDVIIN AAY Sbjct: 1 MRILIFGAEGQLGTELCRVLGHH-DLAPFSHIEADVADLGAVLRQTERIRPDVIINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E + A +NA GA A AA G ++ISTDYVFDG P E+ P NP Sbjct: 60 TDVDGCESARDKAVLVNAIGARNAAIAARRAGAKFVHISTDYVFDGKKDGPYVEYDPPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKL GE V + ILR AW+Y G NF+ +ML LA+ R E+ VV DQ G Sbjct: 120 LNVYGWSKLLGERMVLEQNPDSFILRVAWLYGPAGRNFVKTMLSLARARDELRVVNDQRG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A I LIE T G++H T+ G +W +FA IF G Sbjct: 180 TPTFAGDVANQI----DLLIE---TESYGLYHCTSQ-GECTWYEFAVEIF----RLLGMD 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + T ++P A RPA S LD L + W++ +R+ Sbjct: 228 LRVVPVSTSEFPRPARRPANSVLDNLLLRVQGMDIMPHWRDSLRD 272 >gi|229495562|ref|ZP_04389295.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas endodontalis ATCC 35406] gi|229317545|gb|EEN83445.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas endodontalis ATCC 35406] Length = 314 Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 136/269 (50%), Gaps = 19/269 (7%) Query: 25 EIIRVGRPDIDLLKPKDF-------ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSIN 77 +I + R DL P+ A F + +++N AAYT VD AE P+ A IN Sbjct: 38 DIYPLSREQFDLAHPETLPPVLERLALRFEHYREIILLNAAAYTQVDLAEIHPKEAEVIN 97 Query: 78 AEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 +A+ + I I ISTDYVFDG P P +P+++YG +K EE VA Sbjct: 98 TIAVDTMARVCARLQIRFIQISTDYVFDGAYDQPYPVDYPPHPISVYGTTKWHAEEAVAR 157 Query: 138 Y--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 Y I+RT+W+YS + NF +M LA ER E+ VV DQ G P+S +A + Sbjct: 158 ALPLGEYAIVRTSWLYSPYRQNFYRTMWCLAHERSELRVVADQIGAPSSTESVAEQLF-- 215 Query: 196 AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 L+ + +L + H + G SW FA+ I E A R + +V+ I T+ YPT A Sbjct: 216 ---LLCSRREALPPVLHFV-NRGETSWYGFAQAIV-EKAGRSH-FCRVHPITTEDYPTAA 269 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVR 284 HRP S L+ S L + N + +W+E +R Sbjct: 270 HRPRNSRLEVSCLDS--NTPLCSWQEALR 296 >gi|170781062|ref|YP_001709394.1| putative dTDP-sugar reductase [Clavibacter michiganensis subsp. sepedonicus] gi|169155630|emb|CAQ00748.1| putative dTDP-sugar reductase [Clavibacter michiganensis subsp. sepedonicus] Length = 284 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/287 (34%), Positives = 151/287 (52%), Gaps = 18/287 (6%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + LV G G + Q L ++ DV R ++D+ D A+ + + DV++N AA Sbjct: 3 RILVTGGRGMLGQDLVPALAAHDVTAP--ARAELDI---TDEAAVRAAVAGHDVVVNLAA 57 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE+ + A +INA GAG +A+AA G +++STDYVFDG + TP E +P Sbjct: 58 YTAVDAAEEHEDEARAINATGAGVLARAAAEAGARIVHVSTDYVFDGSATTPYPEDAPHA 117 Query: 120 PLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P++ YG++K GE V + + I+RTAW+Y G +F +MLRLA +SVV DQ Sbjct: 118 PVSAYGRTKAEGERLVLDGHPDGASIVRTAWLYGAGGPSFPSTMLRLAASHDTVSVVDDQ 177 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + +A I++ L++ + G+FH TA G +W A+ +F AE G Sbjct: 178 RGQPTWTVDLAARIVE----LVDAGAPA--GVFHGTAT-GETTWFGLAQAVF---AEAGL 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + + A RPAYS L + W+E + + Sbjct: 228 DPERVRPTDSASFVRPAPRPAYSMLGHDAWGRVGLAPLRDWREALSD 274 >gi|317124301|ref|YP_004098413.1| dTDP-4-dehydrorhamnose reductase [Intrasporangium calvum DSM 43043] gi|315588389|gb|ADU47686.1| dTDP-4-dehydrorhamnose reductase [Intrasporangium calvum DSM 43043] Length = 282 Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 150/289 (51%), Gaps = 15/289 (5%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPA 58 + LV G G +A+ L ++ + +G ++D+ P+ A+ + D+++N A Sbjct: 5 QRVLVTGAGGMLARDLVPALRAAGHAVTALGADELDITGAPECLAA---AAGHDLVVNCA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+ VD+AE E +AF++NA GA +A+AA G ++ STDYVFDG + P P Sbjct: 62 AFARVDEAEREEPLAFAVNALGAANVARAAAHAGARILHFSTDYVFDGQANRPYAAEHPP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL+ YG++KLAGE V + ++ ++RTAW+Y G NF+ +MLRLA+ER + VV DQ Sbjct: 122 SPLSAYGRTKLAGEWAVRALCADHWVVRTAWLYGAGGPNFVGTMLRLAEERGTLDVVDDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++++ G +H T+ G +W A IF E R Sbjct: 182 RGQPTWTRDLAELVVRMVDARAPT------GTYHGTSS-GETTWHGLARAIFEE--RRLD 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P+ +V T +P A RPAY L L I W+E + L Sbjct: 233 PH-RVRPTSTDAFPRPAPRPAYGVLSHRSLEEAGIDPIRDWREALAEYL 280 >gi|239931310|ref|ZP_04688263.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] gi|291439684|ref|ZP_06579074.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] gi|291342579|gb|EFE69535.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] Length = 307 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 8/289 (2%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G G + Q L+ + + R +DL + P V++N AA+TA Sbjct: 15 LVTGAGGMLGQDVLARLAAAGERTTALDRAALDLTDADAVRRALQNHRPAVVVNCAAWTA 74 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE A +IN +G +A A G +++STDYVF G + P E +PT P + Sbjct: 75 VDDAETREAEALAINGDGPAHLADACARTGAVLLHVSTDYVFAGDATAPYAEDAPTAPRS 134 Query: 123 IYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KLAGE+ V ++ + ++RTAW+Y G NF+ +M+RL +R + VV DQ G Sbjct: 135 AYGRTKLAGEQAVLSTLPDRGYVVRTAWLYGAGGPNFVRTMIRLEGQRETLDVVDDQRGQ 194 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A ++ + + + T+ G++H T+ G +W F IF G Sbjct: 195 PTWSADLAGLLLVLGRAAL--AGTAPAGVYHGTSS-GETTWYGFTREIF---RLLGADPD 248 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V ++ + A RPAYS L + A + W+E + I Sbjct: 249 RVRPTTSEAFVRPAPRPAYSVLGHERFAAAGIEPLRDWREALTEAFPEI 297 >gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM 43017] gi|256584548|gb|ACU95681.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM 43017] Length = 313 Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 16/294 (5%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQD-VEIIRVGRPDIDLLKP-------KDFASFFL-SF 49 + LV G GQ+ + L ++ + D +++I G ++D+ +P D A+ S Sbjct: 12 IAVLVPGGRGQLGRDLVAAAAALGDRIDVIAPGSAELDVTEPGAVVEAVTDLATGAAQSG 71 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 V+IN AAYTAVD AE++ AFS+NA+G +A S G+P +++STDYVF G + Sbjct: 72 RRAVVINAAAYTAVDAAEEDEGTAFSVNADGPRMLAAVCSSRGVPLVHVSTDYVFSGTAD 131 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P + P + YG++K AGE V ++RTAW+Y G+NF+ +M+ L R Sbjct: 132 RPYEPEDALGPRSAYGRTKAAGENAVLGSGARAWVVRTAWLYGAGGNNFVRTMMELESRR 191 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +SVV DQ G+PTS+ +AR ++++A + I + R + H T + G +W A + Sbjct: 192 DTVSVVDDQCGSPTSSADLARGLLELA-DRITSGRGPRRKVLHCT-NSGQTTWFGLARAV 249 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 F E G +V T+ +P A RP YS L + + + W+E + Sbjct: 250 F---EELGADPGRVRPCSTEDFPRPAPRPPYSVLSNAAWLESGLTPLRPWREAL 300 >gi|303328202|ref|ZP_07358640.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. 3_1_syn3] gi|302861532|gb|EFL84468.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. 3_1_syn3] Length = 296 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 93/266 (34%), Positives = 139/266 (52%), Gaps = 16/266 (6%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 ++ +GR D +LL+ D + N A+T VD AED PE A +N A+ Sbjct: 28 QVETLGRADGNLLEMPFLEERLAKADADAVFNAVAWTQVDDAEDHPEDALLMNRTLPDAL 87 Query: 85 AKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNY 142 A+ ++G ++ STD+VF G +TP E +P +YG++KLAGEE V Sbjct: 88 ARVLKALGRGHLVHFSTDFVFSGPHQTPWREDDAPHPAGVYGRTKLAGEEAVLRVLPERS 147 Query: 143 VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 ++RTAW++ NF+ ++L ++R ISVV DQFG+PT +L +A Q + +L E Sbjct: 148 CVVRTAWLFGPGRKNFVDTILAACQKRDAISVVHDQFGSPTYSLDLA----QWSTSLAEK 203 Query: 203 SDTSLRGIFHMTADGGPVSWADFA-EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 T GI+H + G SW + A E I A GP ++ I + Q+P KA RP YS Sbjct: 204 EAT---GIWH-AVNSGQASWCELACEAI----ALTAGP-CRLEPIASSQWPQKAQRPVYS 254 Query: 262 CLDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL+ + W + +R+ L Sbjct: 255 VLDTSKLSEFLGKKPRPWPQALRDFL 280 >gi|269957343|ref|YP_003327132.1| dTDP-4-dehydrorhamnose reductase [Xylanimonas cellulosilytica DSM 15894] gi|269306024|gb|ACZ31574.1| dTDP-4-dehydrorhamnose reductase [Xylanimonas cellulosilytica DSM 15894] Length = 281 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 150/285 (52%), Gaps = 14/285 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G +A L ++ + E++ + D+D+ + F DV+ N AA Sbjct: 1 MRWLITGGGGMLATDLEKTLAERGHEVVTATQHDLDITDADACVAAVAGF--DVVANAAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AED +AF++NA GA +A+AA + G +++STDYVFDG + P +P Sbjct: 59 WTDVDGAEDHEPVAFAVNAVGAANLARAATAAGARLLHVSTDYVFDGDATEPYPAHAPVA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++K AGE V + +++I+RTAW+Y F ++ R+ +E+ SVV DQ Sbjct: 119 PRSAYGRTKAAGEWAVLA-EGDHLIVRTAWLYGATTGKFPRTIARVLREKGAASVVDDQV 177 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++++A + RGI+H T+ GG SW + A+ + +A G Sbjct: 178 GQPTWTADLADLMVRLADA------GAPRGIYHGTS-GGRCSWFELAQEV---AATIGLD 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 S V + + KAHRPAYS L L I W+E R Sbjct: 228 PSVVTPTSSASFAAKAHRPAYSVLSHDSLEAIGVAPIGDWRERFR 272 >gi|269793220|ref|YP_003318124.1| dTDP-4-dehydrorhamnose reductase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100855|gb|ACZ19842.1| dTDP-4-dehydrorhamnose reductase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 278 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 143/297 (48%), Gaps = 29/297 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K L+ G GQ++ + + + + +E + +GR D+D+ + P + N AA Sbjct: 2 LKFLITGKQGQLSLAFAELLKTRGIEFLALGRHDLDISDLNSVRRVIAHYKPGAVFNGAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE+ E AF NA G +A A + IP I STDYVFDG P PT Sbjct: 62 YNDVDKAEENRETAFLANAIGPKNLALACAEMSIPLITFSTDYVFDGKKSAPYTTEDPTC 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERREISVVC 176 PLN YG+SKLAGE V +++ R +WV+ G SNFL +L A + + +V Sbjct: 122 PLNAYGESKLAGEIFVHESCQQFILARVSWVFGEKGKTESNFLKKLLYWASSNKRLRIVD 181 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADFA-EYIFWES 233 DQ +P+ A IA A+ ++L ++ G+ H+ G WA A + + W Sbjct: 182 DQISSPSFAPDIAEAV----YSLFKDGKW---GLSHLCNTGFCSRYDWAKIALQTVNWS- 233 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ R ++++ T A RPA+S L S + +W+E L N+ Sbjct: 234 -------GELMRAKSREFRTAAQRPAFSALRSS-------YELPSWEESTLRCLSNL 276 >gi|237799717|ref|ZP_04588178.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022572|gb|EGI02629.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 207 Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVLGEVVALDRHTVSTDYGDLSGDLSNLEGLRDTIRRVQP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETEQELAHTVNALASQVLAEEAHTLDALLVHYSTDYVFDGTGTTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + +N YG +KL GE + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSAVNYYGATKLEGERLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSA---LQIARAIIQ 194 ++V+ DQ G PT A IA A +Q Sbjct: 182 LNVIADQIGAPTGAELLADIATAALQ 207 >gi|311113106|ref|YP_003984328.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931] gi|310944600|gb|ADP40894.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931] Length = 478 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 26/278 (9%) Query: 3 CLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G +GQ+ + L + Q++ V R +DL P+ + + F S +IN AAYT Sbjct: 188 LLIVGASGQLGRELVRQLTAQNIPFEAVDRDRLDLGTPEKWRNTFRWRSYRAVINAAAYT 247 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFS- 116 AVD AE PE A++ NA G A+A + +P +++STDYVFDG P+ E+S Sbjct: 248 AVDNAE-TPEGRREAWAANAHGVAALASVCEEANLPLVHVSTDYVFDG--NLPVGQEYSV 304 Query: 117 --PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P PL++YG SK AGE ++ +Y +LRT+WV G NF+ +M LA+ + +V Sbjct: 305 EHPIAPLSVYGASKAAGESAATAWRKHY-LLRTSWVVGE-GKNFVATMASLAERGVDPAV 362 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ+G PT +A A + H L + G +H++ G ++WAD A ++ Sbjct: 363 VADQWGRPTFTQDLAGAAL---HLLFTGAPY---GTYHVSNSGEVITWADLARAVY---T 413 Query: 235 ERGGPYSKVYRIFTKQYPTKAH----RPAYSCLDCSKL 268 G ++V T++Y A RPA S LD SKL Sbjct: 414 GTGHDAARVSNTTTEEYFANAQVFAPRPANSALDLSKL 451 >gi|261879586|ref|ZP_06006013.1| dTDP-4-dehydrorhamnose reductase [Prevotella bergensis DSM 17361] gi|270333817|gb|EFA44603.1| dTDP-4-dehydrorhamnose reductase [Prevotella bergensis DSM 17361] Length = 289 Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 93/290 (32%), Positives = 139/290 (47%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-----VEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + G +D+ + + II Sbjct: 1 MNILVTGANGQLGNEMQIVAKNSKNNYLFTDVCDGYQKLDITDIEAIRKMVRENNIGCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I ++NA +AKA + ++ISTDYVF G P E Sbjct: 61 NCAAWTNVDAAETAGDIVETLNAVAPENLAKAMKEVDGLLVHISTDYVFGGDPYNVPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + + V Sbjct: 121 DQTGTPTGVYGLTKLHGEQKIQATGAAHIIIRTAWLYSEFGKNFVKTMLNLTATKPSLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N GI+H + + G SW DFA+ +A Sbjct: 181 VFDQAGTPTYAYDLALTIFDIVEN---RKYVGHSGIYHYSNE-GVCSWYDFAKMT---AA 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G + + ++P+ RPAYS LD +K+ T I + W + ++ Sbjct: 234 LAGHTDCDIQPCHSSEFPSPVTRPAYSVLDKTKIKETFGISVPYWVDSLK 283 >gi|315445612|ref|YP_004078491.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|315263915|gb|ADU00657.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 287 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 14/291 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +++G G + + L+ Q +++ + D D+ +P + D+++N AA Sbjct: 4 RIVIVGAGGLVGRVLAGQAGRQGRDVVALTSSDWDITEPGSGERHLAAG--DIVVNCAAI 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE PE + ++NA GAG +A A +G I++STDYVF G S P D P Sbjct: 62 TNVDLAEAVPERSRAVNAVGAGNVALACARVGATLIHLSTDYVFGGDSTRPYDIDDEPAP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQF 179 L++YG++KLAGE V + + ++RT+W++ G++F M R A +I +V DQ Sbjct: 122 LSVYGRTKLAGEHAVLAALPDAHVVRTSWIFEGGNGADFAAVMRRAAAGSGDIEMVADQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + A++QIA D +RG A+ G S D A+ +F AE G Sbjct: 182 GSPTYVGDLCAALLQIA-------DGGVRGPLLHAANAGSASRFDQAQAVF---AELGAD 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V+ I ++P A RP+YS L +K + W+ + L + Sbjct: 232 PGRVHPISGDRHPRPAPRPSYSALAATKSTAAGLTPLRPWRAALAEALATM 282 >gi|300728520|ref|ZP_07061879.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] gi|299774238|gb|EFI70871.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] Length = 295 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 94/308 (30%), Positives = 143/308 (46%), Gaps = 34/308 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------------VQDVEIIRVGRPDIDLLKPKDFASFF 46 M LV G NGQ+ + + V+ +E + DID ++ Sbjct: 1 MNILVTGANGQLGNEMCIVAKNTNDNYIFTDVNEVEGLETTYLDITDIDAIR-----KMV 55 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAF---SINAEGAGAIAKAADSIGIPCIYISTDYV 103 + I+N AA+T VD E + ++A +NA+ +AK + I ISTDYV Sbjct: 56 KEHDVNAIVNCAAWTNVDACETDEKLATLAEKLNADAPENLAKVMKEVDGWLIQISTDYV 115 Query: 104 FDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 F P P +YG +KL GE+K+ + YVI+RTAW+YS FG NF +M Sbjct: 116 FGKEPYNVPCGPDQKGTPTGVYGTTKLHGEQKIIATGCKYVIIRTAWLYSEFGKNFCKTM 175 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L L + + VV DQ GTPT AL +A AI+ I N G+FH + + G SW Sbjct: 176 LNLTATKPALKVVFDQAGTPTYALDLANAIVTILQN-------PQVGVFHFSNE-GVCSW 227 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 DF + I + G + ++ +YP+ RP+YS LD + T +++ W + Sbjct: 228 YDFTQMI---AKIAGNTDCDIQPCYSSEYPSPVTRPSYSVLDKRTIKETFGVKVPYWVDS 284 Query: 283 VRNILVNI 290 + + N+ Sbjct: 285 LEKCIANL 292 >gi|62737780|gb|AAX98196.1| sugar dehydratase/epimerase [Streptomyces aizunensis] Length = 317 Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 95/295 (32%), Positives = 153/295 (51%), Gaps = 14/295 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ +VIG G + +++ + + + + VG D+DL P+ A+ PDV++N AA Sbjct: 12 LRWMVIGATGMLGGEVAAQLTARGADPVGVGSADLDLTDPQAVAAAVADGGPDVVVNCAA 71 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---SRTPIDEFS 116 +TAVD AE E E A ++N GAG +A+A + G +++STDYVF G + P E + Sbjct: 72 WTAVDLAETEEEAALAVNGTGAGHLARACAATGSRLLHVSTDYVFRGAPADAGHPYAEDA 131 Query: 117 PTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-RREISV 174 +P YG++KL GE V A ++RT+W+Y F+ +M RLA+E R + V Sbjct: 132 EPDPATAYGRTKLVGERAVLAELPATAAVVRTSWLYGRDNGGFVHTMARLAREPGRTVDV 191 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G P+ +A II++A + + G+FH T GG +W D A +F + Sbjct: 192 VDDQHGQPSWTPDVAARIIELAALPADRA----HGVFHATG-GGRTTWYDLAREVFRLTG 246 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + +V RI + A RPA+S L + A T + W+ + + L+ Sbjct: 247 QD---PDRVRRIDSSGLRRAAVRPAWSVLGHDRWAATGLAPMRHWRTALADALMG 298 >gi|269978090|ref|ZP_06185040.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris 28-1] gi|306818461|ref|ZP_07452184.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris ATCC 35239] gi|307700929|ref|ZP_07637954.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris FB024-16] gi|269933599|gb|EEZ90183.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris 28-1] gi|304648634|gb|EFM45936.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris ATCC 35239] gi|307613924|gb|EFN93168.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris FB024-16] Length = 286 Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 25/287 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSF-----SPDVI 54 M+ +V+G G + Q + + ++ E+ + RP +DL + F S DV+ Sbjct: 1 MRWIVLGAKGMLGQDVVELLQSKNQEVQSLDRPQVDL-------TLFDSLRSQVRDADVV 53 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPI 112 +N AA+TAVD AE++ AF +NA+ +A IG +++STDYVFD + TP Sbjct: 54 VNCAAFTAVDAAEEQERQAFDVNAKAVQYLAVQCREIGARLVHVSTDYVFDEPADRDTPC 113 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + P YG++KLAGE + + +Y+I+RTAW+Y G+ F +M RLA E + Sbjct: 114 PEDALPAPAGAYGRTKLAGEWALQAQGKDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRL 173 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFG PT R + + L+E + GI+H T+ G SW F + I Sbjct: 174 TVVADQFGQPT----WTRDLTDLIWRLVEAKAPT--GIYHGTS-SGKTSWYGFTQEIV-- 224 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 G + V + T +P A RPA+S L L I W Sbjct: 225 -RSLGRNPAMVVPVATADFPRPAPRPAFSVLGHRALEAIGVAPIGQW 270 >gi|237737858|ref|ZP_04568339.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] gi|229419738|gb|EEO34785.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] Length = 470 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 146/286 (51%), Gaps = 14/286 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ Q + + V+ I ++D+ K + + + +IIN AAY Sbjct: 192 VLLTGANGQLGQGFQKLFDKLGVKYIATDYQELDITNKKKVRKYIENNNFTIIINCAAYN 251 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VDKAE+E E +++NA +A+ + STD++FDG P E NPL Sbjct: 252 NVDKAEEEVEKCYALNAYAPKNLAEICKEKNKIFVTYSTDFIFDGEKEIPYTEEDIPNPL 311 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++Y KSKL GE+ + +++I RT+WV+ + +NF ++ +K R + +V DQ + Sbjct: 312 SVYSKSKLEGEKYSLKHEKSFII-RTSWVFGMGNNNFCKQVINWSKSRDTLKIVDDQVSS 370 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A + + +LI+ T G++H ++ G S + AEYI + G Sbjct: 371 PTYSKDLA----EFSWDLIQ---TDKFGLYHF-SNSGEASKYEQAEYILKKIDWNG---- 418 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ R T +P KA R YS LD SK+ N +I WKEG+ L Sbjct: 419 KLERAKTDDFPLKAKRAKYSKLDSSKIEKLLNKKIPYWKEGIDRFL 464 >gi|148655561|ref|YP_001275766.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] gi|148567671|gb|ABQ89816.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] Length = 281 Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 147/287 (51%), Gaps = 22/287 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+ ++L E++ + D+DL P D ++ +I+PAAY Sbjct: 1 MRIAVTGASGQLGKALQRALCGVHEVVPLSHADLDLEHP-DCVQRLVATDAQCVIHPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P+ A+ +NA G +A A + P +YIST+ VF+G + P E+ P Sbjct: 60 TNVDGCAHDPDRAYRVNALGTRYVALACQLLDAPLVYISTNEVFNGTATAPYLEYDRPAP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERREISVVCDQ 178 +N YG SK AGE+ V + + I+R AW +FG NF+ ++LRLA+ER +I++V D+ Sbjct: 120 INPYGYSKWAGEQAVRELLHRFYIVRVAW---LFGGERNFVRTVLRLARERNQIAMVADE 176 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER-- 236 G+PT A A A+ + LIE TS G +H+ +G + Y F + R Sbjct: 177 IGSPTCAPDAAEAVAR----LIE---TSCYGTYHLVNEG------SCSRYEFAAATLRLA 223 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G + I +YP + P Y+ L A+ IR+ W+E + Sbjct: 224 GRDDVALQPITLAEYPRASKVPPYTPLRNFAAADL-GIRLRPWEEAL 269 >gi|206602706|gb|EDZ39187.1| DTDP-4-dehydrorhamnose reductase [Leptospirillum sp. Group II '5-way CG'] Length = 288 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 145/296 (48%), Gaps = 22/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG+ GQ+ +I+++ RPD D+ P+ S DV+IN AAY Sbjct: 1 MRIGVIGSRGQLGADFCLNSSPSDKILKLDRPDFDIDNPEHLTKID-ELSLDVLINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----DGLSRTPIDEFS 116 VDKAEDE + AF +N + IA I + STDYVF + R P+ E Sbjct: 60 NDVDKAEDEIDQAFRLNTQAPSRIAAYCQKKNILFVTFSTDYVFGEFEKKIPRHPLREAD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERRE 171 PL++YG SK AGE V + + +++RT +Y S NF+ ML+L K + Sbjct: 120 EALPLSVYGVSKWAGERMVLNRNPDALVIRTCGLYGHNRGSHLKKNFVDLMLQLGKGNQT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ TPTS +++ ++ LI+ S G++HMT + G SW +FA+ IF Sbjct: 180 LRVVSDQIVTPTSTWELSVNTLK----LIQCSPKG--GLYHMTNE-GQCSWFEFAQAIF- 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + K+Y KA RP+YS L K+ + I WK + L Sbjct: 232 ---HFKGLTPDLRPVSQKEYGAKAKRPSYSVLSKEKVGK-YGIAFQPWKSALSQYL 283 >gi|117925414|ref|YP_866031.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] gi|117609170|gb|ABK44625.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] Length = 300 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 19/294 (6%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G GQ+A++L + GR DL +P P ++I+ AA T VD Sbjct: 8 ITGAQGQMARALYQQTPPGCAVRCFGRQQWDLSQPAKL-ELPRQNLPQLLIHTAAMTDVD 66 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 AE +P +AF++N +A+ GI + +STDY+FDG + P NPL++Y Sbjct: 67 GAEKDPHLAFALNGTATERLAQWCADYGIAMLALSTDYLFDGQATRPYRPDDRVNPLSVY 126 Query: 125 GKSKLAGEEKVAS-YTNNYVILRTAWVY-SIFGSNFLLSMLRL-AKERREISVVCDQFGT 181 G+SK GE+ + + I+RTAW+Y G NFL +MLRL + + +V DQ+G Sbjct: 127 GRSKQVGEQAIQEILGDQAAIIRTAWLYDGGSGRNFLTTMLRLMGQGTTPLRIVEDQWGA 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+ +AR + +A L++ + G++H + G SW +FA+ I + E G Sbjct: 187 PTACDALARVVWALAQQLLDQAHGG--GLYHWSCQGQ-SSWFEFAQTIQQIALEMGLLQH 243 Query: 242 KV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST------WKEGVRNIL 287 V I QY A RPAYS LD + L R+ T W++ +R ++ Sbjct: 244 PVELQPISAVQYGAPAPRPAYSVLDSTLLVQ----RLGTVAQPPPWQQALRAVM 293 >gi|54026611|ref|YP_120853.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152] gi|54018119|dbj|BAD59489.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152] Length = 285 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 88/238 (36%), Positives = 121/238 (50%), Gaps = 10/238 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+IN AAYTAVDKAE EP+ AF++N G +A A G I++STDYVF G P Sbjct: 57 DVVINCAAYTAVDKAETEPDAAFAVNGTGPAVLASACARAGARLIHLSTDYVFGGTHTDP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + PT P + YG+SKLAGE V ++RTAWVY+ +F+ +M R A ER Sbjct: 117 YEPTDPTAPASAYGRSKLAGERAVLDLAPAAHVVRTAWVYTGDRGDFVATMRRFAAERPT 176 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PT A +A ++++A + H T + G SW + A +F Sbjct: 177 VDVVDDQIGSPTYAADLAAGLLELAATPAAPP------LLHAT-NAGTASWFELARAVF- 228 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 AE G +V + +P A RPAYS L + W+ + L N Sbjct: 229 --AEIGADPERVRPCASSAFPRPAPRPAYSVLSNRAWVAAGLTPLRPWRAALHEALGN 284 >gi|170288109|ref|YP_001738347.1| dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] gi|33413325|emb|CAD67950.1| putative dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] gi|170175612|gb|ACB08664.1| dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] Length = 283 Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 153/283 (54%), Gaps = 17/283 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINP 57 MK L+ G NGQ+ ++ + + VE I + ++D+ + F +S +P++ IIN Sbjct: 1 MKVLITGANGQLGRAFQELFKNEKVEFIAAPKEELDITDLRKIREF-VSKNPEITHIINC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY VD+AE + + A+ +N G +A ++ IG ++ STDYVF G +P + Sbjct: 60 AAYNKVDEAERDWKTAYLVNGIGPKNLAIVSNEIGAELVHYSTDYVFSGKKGSPYTIYDT 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 ++P+N YG+SK+ GE V S++N Y ++RT+WV+ G NF+ +L +K+ + + +V D Sbjct: 120 SDPINKYGESKVLGERFVMSFSNRYYLIRTSWVFGD-GMNFVRKVLEWSKKSKVLRIVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + +PT A +A+A ++ G++H+T + G S ++AE+I E G Sbjct: 179 EVSSPTYAPDLAKATWELIK-------LKAYGLYHIT-NSGYCSRYEWAEFILNEIGWDG 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++ R + + A RP +S LD L +++ +WK Sbjct: 231 ----ELKRAKQEDFNLPAKRPKFSVLDGFGLREFTGMKMESWK 269 >gi|206900982|ref|YP_002250211.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] gi|206740085|gb|ACI19143.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] Length = 281 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 15/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G G + Q +D E+I + DI+L + K+ S PD++I+PAA Sbjct: 4 RILITGAKGFLGQYFVKE-FEDEEVIPITHQDINL-EDKNAIEKITSLKPDLVIHPAAIR 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + D E++PE A+ +NA G +A A + IP IYISTDYVF G TP EF P NP+ Sbjct: 62 SPDICEEDPEKAWKVNAVGTKHVAIACSLLDIPLIYISTDYVFSGGKDTPYTEFYPPNPI 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YGK+KL GE + + I+RT++V+ +G+N L + KE +EI + F + Sbjct: 122 NLYGKTKLYGEIFTKEFCKKHFIIRTSYVFGEYGNNALTQIYNSLKEGKEIKLSNYHFAS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-PY 240 T A + R + ++ S T+L G +H+ + G ++ DFA + AE G Sbjct: 182 CTYAKDLVRKVKEL-------SFTNLYGTYHI-VNKGIITRYDFA----CKVAEIAGFSK 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ + A RP YS L L + + ++E +R + Sbjct: 230 EKVIPLNSETFKAPAKRPLYSVLRNYMLEIYNMDDLPYYEESLRKAM 276 >gi|226365778|ref|YP_002783561.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus B4] gi|226244268|dbj|BAH54616.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus B4] Length = 282 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 146/279 (52%), Gaps = 12/279 (4%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A L + VG ++D+ + + S V+IN AAYTA Sbjct: 5 LVTGARGQLAGHLLRRAGAMGMPARGVGSDELDITDRDAVDAQVEAGS--VVINCAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + + A ++N +G +A A +G I++STDYVF G TP + +PT P Sbjct: 63 VDAAESDEDAARAVNEDGPANLAAACARVGARLIHVSTDYVFAGDGDTPYEVDAPTGPAT 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++KLAGE V + + ++RTAWVYS GS+F+ +M RL +ER + VV DQ G+P Sbjct: 123 AYGRTKLAGERAVHAALPSAHVVRTAWVYSGVGSDFVSTMRRLERERDTVDVVDDQVGSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +A A++++A SD + H T + G SW D A +F E+ G + Sbjct: 183 TFAGDLADALLELAG----RSDIGAP-VLHAT-NSGRASWFDLARAVFEEA---GADPQR 233 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + Q+ A RPA+S L A+ + W++ Sbjct: 234 VRPCTSAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWRD 272 >gi|158056583|emb|CAP11383.1| 4-ketoreductase [Streptomyces olivaceus] Length = 293 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 14/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + L+ G G + + L+ + + E + R ++D+ D A+ + + DV++N AA Sbjct: 3 RWLITGAAGMLGRDLAEVLAESGAEYTALTRKELDI---TDTAAVRAAVAGHDVVVNAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE E A IN EG A+A A G I +STDYVF G + P +PT Sbjct: 60 WTDVDGAETEEAAATRINGEGPRALAAACAETGAVLIQVSTDYVFPGDATEPYRHDAPTA 119 Query: 120 PLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P+N YG+SKLAGE V YV+ RTAW+Y G NF+ +ML LA++R + VV D Sbjct: 120 PVNAYGRSKLAGELAVTELLPERGYVV-RTAWLYGAHGRNFVSTMLGLAEQRETVDVVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT +AR + + + + G++H TA +W D A F + G Sbjct: 179 QRGQPTWTRALARQLRDLGEAAVAGKAPA--GVYHGTA-AETATWFDLARAAFELT---G 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V ++++ A RP+YS L + A W+E + L Sbjct: 233 LDPERVRPTTSEKFVRPARRPSYSVLAHERWAEAGVAAQPHWREQLTEAL 282 >gi|239907497|ref|YP_002954238.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio magneticus RS-1] gi|239797363|dbj|BAH76352.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio magneticus RS-1] Length = 293 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/292 (34%), Positives = 143/292 (48%), Gaps = 15/292 (5%) Query: 2 KCLVIGN-NGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + + LS+ M ++ R +D + A F ++N A Sbjct: 9 RAIVLGGLTGLVGRPLSAAMEEAGFAVLPTTRTVLDPFDMEAVAREIEHFEATHVVNTVA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ + A+ +N + G +A+ G +++STD+VFDG P E N Sbjct: 69 YTAVDAAEDDADEAYRVNRDLPGRLARVCRKAGARLVHLSTDFVFDGAKGAPYAEDDAPN 128 Query: 120 PLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE + S + + ILRTAW+Y NF+ ++L LAK R E+ VV DQ Sbjct: 129 PESVYGASKLAGERAILDSGLDAFQILRTAWLYGPGKKNFVATILGLAKTREELKVVADQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT L +A I +A T GIFH G SW D A E+ G Sbjct: 189 IGSPTYTLDLAGWIADLAR-------TEAAGIFHAVGS-GQASWCDLAA----EAVAASG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + YP KA RP YS LD +KLA W VR + + Sbjct: 237 LPCRVLSIPSDAYPQKAKRPPYSVLDNAKLAAAIGRGPRAWTITVREYVYEL 288 >gi|312199899|ref|YP_004019960.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] gi|311231235|gb|ADP84090.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] Length = 292 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 142/269 (52%), Gaps = 20/269 (7%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVG---RPDIDLLKP-------KDFASFFLSFSPDVI 54 +IG+ GQ+ L + D + + R + D+ P +D A + Sbjct: 1 MIGSGGQVGSELCRLLALDPRLPAIAGLTRSECDITDPARLRAVIRDQARPAKVQGGLTV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AA+T VD AE + A+++NA G +A A G I++STDYVFDGL+ P + Sbjct: 61 VNTAAWTDVDGAETDEVGAYAVNATGPAHLAAACAEAGATLIHLSTDYVFDGLADKPYEV 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T+P + YG++KLAGE+ V + + ++RTAWVY G NF+ +M RLA+ER ++V Sbjct: 121 DDQTSPASAYGRTKLAGEQAVLALCPSSYVVRTAWVYGAVGKNFVKTMARLARERDTLTV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G+PT + +A +I++ S S G++H T + G +W FA+ I E Sbjct: 181 VDDQRGSPTWSADLATGLIELIL-----SGASF-GLYHFT-NAGDTTWHSFAQAIMEEIG 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 E +KV T +P A RPA+S L Sbjct: 234 ED---PAKVLPTTTAAFPRPAPRPAFSVL 259 >gi|225374844|ref|ZP_03752065.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM 16841] gi|225213305|gb|EEG95659.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM 16841] Length = 285 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/289 (33%), Positives = 144/289 (49%), Gaps = 18/289 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G GQI Q+++ + + + E++ D+D+ + F PD+IIN + Sbjct: 3 KIWVCGARGQIGQAVNDVVDKLEFEMLDTDVDDLDVTDTDEVLRFGEMNRPDIIINCSGM 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T + E+ P AF +NA GA +A A + + +STD VFDG S P EF TNP Sbjct: 63 TDISSCEENPSQAFKVNALGARNLAIVAAKMQAKMVQLSTDDVFDGKSTEPYTEFDITNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V +T + I+R+ WVY G NF+ L+ ++S+ DQFG Sbjct: 123 GTVYGKSKLAGENYVKEFTTKHFIVRSTWVYGK-GQNFINGFLKKVDAGEQLSIASDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 +PTSA ++AR ++ + H TS G +H T G +A FA+ I + + Sbjct: 182 SPTSANELARFLLHLVH-------TSEYGTYHATNKGVCSRYA-FAQEILKMTGKTASMQ 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V F+K RPAY+ LD ++ W++ +R L Sbjct: 234 PVPTVMSDFSKV------RPAYAVLDNFIMSMVPIYDFPDWQDSLREYL 276 >gi|325295552|ref|YP_004282066.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066000|gb|ADY74007.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 291 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 150/292 (51%), Gaps = 24/292 (8%) Query: 1 MKCLVIGNNGQIAQS---------LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP 51 M+ L+ G GQ+ + + S+ + VE I VGR + D+ F S P Sbjct: 1 MRYLIFGAKGQLGREFVKWLSGGLVESLKGKTVEWIGVGREECDISDLNQVLELFESTKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +V++N AAY VDKAE++ A +N+ G +A A + ++ STDYVFDG Sbjct: 61 NVVVNCAAYNLVDKAEEDYVSAVKVNSVGVRNLAFACNRYRAFLVHYSTDYVFDGKKENA 120 Query: 112 --IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 I++ P NPLN YGKSKL GEE + +N++ILR +WVY NF+ +L+ A+ Sbjct: 121 LYIEDDKP-NPLNEYGKSKLIGEEFIKEEIDNFLILRVSWVYGEGRQNFIYKLLKWAENN 179 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + + D+ PTS R I+ + ++ L G++H+T + G S ++A+ + Sbjct: 180 DYLKISYDEISVPTS----TRTIVDVTLKALK---EGLEGLYHLT-NSGYASRYEWAKKV 231 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 F ++ + +Y + ++ + A RP +S + K++ NI I +W+E Sbjct: 232 F--KIKKVNKF--IYPVSSEIFNLPAKRPKFSAMSNEKVSQELNIEIPSWEE 279 >gi|317153029|ref|YP_004121077.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio aespoeensis Aspo-2] gi|316943280|gb|ADU62331.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio aespoeensis Aspo-2] Length = 293 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 16/286 (5%) Query: 7 GNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + Q+L+ + + + + D D+L P+ PD+++N AAYT VD Sbjct: 13 GRTGLLGQALTRAFRLAGARPVPLSSQDCDILDPRGVDLLLDRRDPDLMVNAAAYTQVDL 72 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AED+ E+AF++NA +A A IP ++ STD+VF G TP + P ++YG Sbjct: 73 AEDQEEMAFALNATAPPLLASLAAKRLIPFVHFSTDFVFCGNKHTPYLPYDDPCPFSVYG 132 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 SK GE + + +I+R +W++ +NF+ +L L + R ISVV DQ G+P+ Sbjct: 133 ISKADGERGLLRFGYERTLIIRISWLFGPGRTNFVDKILSLCETRGTISVVNDQTGSPSY 192 Query: 185 ALQIA-RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 +A + +AH+ GI H+ A+ G +W A E+ G V Sbjct: 193 TPDVAVNTLALLAHDAT--------GIHHV-ANSGETTWHGLAS----EAVALAGLDCTV 239 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + T YPTKA RPAYS LD S+ T + WK+ + + ++ Sbjct: 240 EPVPTSAYPTKAVRPAYSVLDLSRFIQTTGVTPRHWKQALADYVLG 285 >gi|84498709|ref|ZP_00997450.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84498714|ref|ZP_00997455.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84381009|gb|EAP96897.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84381014|gb|EAP96902.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] Length = 284 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/284 (33%), Positives = 145/284 (51%), Gaps = 15/284 (5%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G +A L + ++ + R D+D+ + DV+ N AA+ Sbjct: 3 RWLVTGAGGMLAHDLLPRLTDAGHDVTPLTRTDLDITDASACRAAVEGH--DVVANLAAW 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE AF++NA GA +A A + +++STDYVF G + TP +P P Sbjct: 61 TAVDDAESHEGAAFAVNALGAANVAAACERSSARLVHVSTDYVFSGDTSTPYAVNAPVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K AGE V ++ +++RTAW+Y G NF+ ++ RLA ER I+VV DQ G Sbjct: 121 RSAYGRTKAAGEWAVLAHCPTALVVRTAWLYGAGGPNFVATISRLATERDTIAVVDDQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A AI ++ + G++H T G +W DFA IF E G Sbjct: 181 QPTWTADLAEAIPRLVEADAQG------GVWHGTG-SGQTTWFDFARAIF---EELGLDP 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR-ISTWKEGV 283 +V T +P A RP +S LD +K TH + + W++G+ Sbjct: 231 ERVTPTTTASFPRPAPRPTFSVLDDAKW-RTHGLDPLPHWRDGL 273 >gi|168705489|ref|ZP_02737766.1| dTDP-4-dehydrorhamnose reductase [Gemmata obscuriglobus UQM 2246] Length = 288 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 143/294 (48%), Gaps = 19/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK V+G GQ+ + L E++ + R ++DL +P+ + S PDV +N AAY Sbjct: 1 MKIAVLGAAGQLGRDLCPRLAVFGEVVPLSRAELDLERPEGIRAAVESVRPDVFVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF--DGLSRTPIDEFSPT 118 VDKAE PE A ++N G A+A A I ++ STDYVF D + P E Sbjct: 61 NLVDKAESAPEAARAVNDAGVEALAAACAGIWAKLVHFSTDYVFGADAVRSAPYTETDEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 P++ YG+SKL GE + + N +++RT +Y G NF+ +MLR+A + + + Sbjct: 121 GPVSAYGESKLRGEHAALAASANNLVIRTCGLYGVWGSGGKGGNFVETMLRVAGQGKPLR 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ TP+ +A A + + G+FH+ +GG +W +FA IF +S Sbjct: 181 VVADQRCTPSYTADVADATVALLGR-------GAGGLFHVV-NGGDCTWHEFAAEIFRQS 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I + ++ A RP YS L +KL W E + L Sbjct: 233 ----GLVPDLTPITSAEFGAAARRPPYSVLSTAKLVAHDVPAPRPWTEALAAYL 282 >gi|127514633|ref|YP_001095830.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126639928|gb|ABO25571.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 309 Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 32/287 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LVIG +GQ++Q+L++ ++ +GR +D+ + ++IN + YT V Sbjct: 5 LVIGRHGQVSQALNATQPDCYQVDYLGREALDVRDSQAIKRLLEQQGYGLVINASGYTQV 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----------------- 106 D AE + + AF++N A+A+ I I++S+DYV+DG Sbjct: 65 DAAETDSQAAFALNHLAVKALAEHCGKRSIRLIHLSSDYVYDGVFDGVFDGVFDEAFKGE 124 Query: 107 LSRTPIDEFSPT---NPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSM 162 L + + PT NPL+ YG+SK GE+ Y + I+RT+W+YS FG NF+ +M Sbjct: 125 LDKQHCQPYRPTDTPNPLSRYGESKWHGEQAALEYGLGHAFIVRTSWLYSPFGHNFVKTM 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L L ++ + + +V DQ+GTPTSA+ + + I Q+ T I+H + D G SW Sbjct: 185 LTLMRQGKPLKIVDDQWGTPTSAITLGQFIWQLIQV------TKPEPIYHWS-DLGVTSW 237 Query: 223 ADFAEYIFWESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCS 266 +FA I +SA G K + I T++Y A RP YS LD S Sbjct: 238 YEFARQIS-DSAYALGLLDKPANISPISTQEYGAPAPRPHYSALDTS 283 >gi|6018309|gb|AAF01815.1|AF187532_11 putative dTDP-4-dehydrorhamnose reductase [Streptomyces nogalater] Length = 291 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 9/267 (3%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E + +GR +D+ + + F + P V++N AA+T VD AE A +N G + Sbjct: 21 EAVVLGRRALDITDGRAVDAAFAAHRPRVVVNCAAFTDVDGAESRWAEAMRVNGGGPRLL 80 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYV 143 A+ G+ I++STDYVF G +R+P E P +YG+SKLAGE V S + Sbjct: 81 ARRCARHGVRLIHVSTDYVFPGDTRSPYGESDAPGPRTVYGRSKLAGERAVLSLLPDTGT 140 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ++RTAW+Y G +F+ +ML A + + VV DQ+G PT A +AR ++ +A + + Sbjct: 141 VVRTAWLYGGQGRSFVRTMLERAPDDGHVDVVNDQWGQPTWAGDVARLLVTLARTPPDRA 200 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 RGIFH T + G +W + A +F + G +V + T P A RPA + L Sbjct: 201 ----RGIFHAT-NAGAATWYELAREVFRLA---GADPERVRPVATADRPGPAPRPACTVL 252 Query: 264 DCSKLANTHNIRISTWKEGVRNILVNI 290 + W+ +R + + Sbjct: 253 GHDRWRLVGVAPPRDWRAALREAMRQL 279 >gi|288549269|gb|ADC52829.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces platensis] Length = 338 Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 133/269 (49%), Gaps = 10/269 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+S+ V+ + +GR +DL S P V++N AA+ Sbjct: 42 RWLVTGASGMLGRELTSLLVRRGAAVTALGRGALDLTNDAAVRSALARHRPAVVVNCAAW 101 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE EP A ++N +G +A+A ++G + +STDYVF G + P E PT P Sbjct: 102 TAVDAAESEPSRAMAVNGDGPRHLAQACRALGAVLLQLSTDYVFAGSAGRPYREDDPTGP 161 Query: 121 LNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +YG +K AGE V YV+ RTAW+Y G NF+ +M+RL E+ + VV DQ Sbjct: 162 RTVYGCTKRAGERAVLDILPEAGYVV-RTAWLYGAGGPNFVATMIRLEAEQDTVPVVDDQ 220 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A + + + T+ GI+H T GG +W A F G Sbjct: 221 HGQPTWTADLADRLAAL--GSAALAGTAPAGIYHATNTGG-TTWYTLARETF---RLLGA 274 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 +V + A RP YS LD + Sbjct: 275 DPGRVRPTTSLALARPATRPGYSVLDQPR 303 >gi|284028523|ref|YP_003378454.1| dTDP-4-dehydrorhamnose reductase [Kribbella flavida DSM 17836] gi|283807816|gb|ADB29655.1| dTDP-4-dehydrorhamnose reductase [Kribbella flavida DSM 17836] Length = 276 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 150/292 (51%), Gaps = 25/292 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+ ++L++ + D ++ D+D+ +F + ++N AA+ Sbjct: 1 MAILVTGAGGQLGRALAAR-LPDARLVT--SADLDITDRAALDAFDWT-GITALVNAAAW 56 Query: 61 TAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVDKAED A+ +NA G +A A +GIP +++STDYVF G + P Sbjct: 57 TAVDKAEDAGSTLAAWDVNAAGVANLAWHARRLGIPLVHVSTDYVFGG-GEGFLPAGHPI 115 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG +K AGE A + Y ++RT+WV+ G NF+ +MLRL ER E++VV DQ Sbjct: 116 DPQGVYGITKAAGE-LAARLSPTYYVVRTSWVFGD-GPNFVRTMLRLGAERDELTVVDDQ 173 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PT + +A A+I + + + G +H T G VSWADFA I G Sbjct: 174 YGRPTYTVDLAAALIALLESEAPS------GTYHATGAGDVVSWADFAAAIL------AG 221 Query: 239 PYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + +Y A RPA S LD S L I + W+E + L Sbjct: 222 TSCKVRPISSAEYAQGKVIAPRPANSALDLSAL-EAVGITMRDWREALAEYL 272 >gi|255027553|ref|ZP_05299539.1| hypothetical protein LmonocytFSL_16515 [Listeria monocytogenes FSL J2-003] Length = 230 Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 82/239 (34%), Positives = 129/239 (53%), Gaps = 15/239 (6%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 L P+ II+ AA+T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVF Sbjct: 1 MLDLKPEWIIHCAAFTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVF 60 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG + TNPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+ Sbjct: 61 DGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLK 120 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LA+ +E+ VV DQ G PT +A I +IE + GI+ ++ G +W + Sbjct: 121 LAETHKELKVVNDQLGRPTYTYDLADFI----RFVIEKN--PAYGIYQF-SNSGTATWFE 173 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 FA I + P + + ++P KA RP S + K+ I TW++ + Sbjct: 174 FATEILKDKDVTVNPCT------SDEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDAL 225 >gi|253583524|ref|ZP_04860722.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC 27725] gi|251834096|gb|EES62659.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC 27725] Length = 475 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 14/285 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ Q + + ++ ++D+ + F + +IN AAY Sbjct: 195 LLTGGDGQLGQDFQKLFDKLGIKYTATDYRELDVTDKEKVKEFVDNNDFTTVINCAAYNN 254 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+EPE F++NA +++ I + STD+VFDG P E + NPL+ Sbjct: 255 VDRAEEEPEKCFALNAYVPKYLSEICKEKNIVFVTYSTDFVFDGQKEIPYTEENIPNPLS 314 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IY K+KL GE+ Y ++VI RT+WV+ + +NF ++ +K + +S+V DQ +P Sbjct: 315 IYSKAKLEGEKYSLEYGKSFVI-RTSWVFGMGNNNFCKQVINWSKGKDRLSIVDDQVSSP 373 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A + + LI+ T G++H++ D G S + A+YI ++ G Sbjct: 374 TYSKDLA----EYSWELIQ---TDRYGLYHLSND-GEASKFEQAQYIL----KKIGWNGI 421 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + R TK +P A R YS LD SKL N +I WK G+ L Sbjct: 422 LERAKTKDFPLPARRAEYSKLDSSKLEKVINKKIPHWKSGIDKFL 466 >gi|158317641|ref|YP_001510149.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] gi|158113046|gb|ABW15243.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] Length = 321 Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 10/228 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 +IN AA+T VD AE + A+++NA GA +A A G +++STDYVFDG + P + Sbjct: 89 VINTAAWTNVDGAESDEAGAYAVNATGAAHLAAACAQAGAALVHLSTDYVFDGDATKPYE 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 P P+++YG++KLAGEE V + ++RTAWVY G NF+ ++ RLA+ER E++ Sbjct: 149 TDDPPAPVSVYGRTKLAGEEAVLALCPESYVVRTAWVYGRTGGNFVKTIARLARERDELA 208 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G+PT ++ +A ++ + + G++H TA G +W FA I Sbjct: 209 VVADQHGSPTWSVDLAAGLLDLV------TARPAPGVYHCTA-AGETTWYGFARAIV--- 258 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A G +KV T+++P A RPAYS L + + +W + Sbjct: 259 AALGQDPAKVRPTTTEEFPRPARRPAYSVLSARSWLDAGLRPLRSWDD 306 >gi|148272189|ref|YP_001221750.1| putative dTDP-4-dehydrorhamnose reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830119|emb|CAN01048.1| putative dTDP-4-dehydrorhamnose reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 284 Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/286 (34%), Positives = 149/286 (52%), Gaps = 16/286 (5%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G+ G + Q L ++ DV R ++D+ + A DV++N AAY Sbjct: 3 RILVTGSRGMLGQDLLPALAAHDVTAP--ARAELDITD--EVAVRRAVEGHDVVVNLAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE+ + A +INA GAG +A+AA G I++STDYVFDG + +P E +P P Sbjct: 59 TAVDAAEEHEDEARAINATGAGVLARAAAEAGARIIHVSTDYVFDGSATSPYPEDAPHAP 118 Query: 121 LNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 ++ YG++K GE V + + ++RTAW+Y GS+F +MLRLA +SVV DQ Sbjct: 119 VSAYGRTKAEGERLVLDGHPDGASVVRTAWLYGAGGSSFPSTMLRLAASHDTVSVVDDQR 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I++ L++ + G+FH TA G +W A +F + G Sbjct: 179 GQPTWTVDLAARIVE----LVDAGAPA--GVFHGTAT-GETTWFGLARAVFTAA---GLD 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + + A RPAYS L A + W+E + + Sbjct: 229 PERVRPTDSASFVRPAPRPAYSVLGHGGWARVGLPPLRDWREALSD 274 >gi|227875200|ref|ZP_03993342.1| dTDP-sugar reductase [Mobiluncus mulieris ATCC 35243] gi|227844105|gb|EEJ54272.1| dTDP-sugar reductase [Mobiluncus mulieris ATCC 35243] Length = 286 Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 142/287 (49%), Gaps = 25/287 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSF-----SPDVI 54 M+ +V+G G + Q + + ++ E+ + RP +DL + F S DV+ Sbjct: 1 MRWIVLGAKGMLGQDVVELLQSKNQEVQSLDRPQVDL-------TLFDSLRSQVRDADVV 53 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPI 112 +N AA+TAVD AE++ AF +NA+ +A IG +++STDYVFD + TP Sbjct: 54 VNCAAFTAVDAAEEQERQAFDVNAKAVQYLAVQCREIGARLVHVSTDYVFDEPADRDTPC 113 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + P YG++KLAGE + + +Y+I+RTAW+Y G+ F +M RLA + Sbjct: 114 PEDALPAPAGAYGRTKLAGEWALQAQGKDYLIVRTAWLYGAKGNCFPKTMARLAGGHDRL 173 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFG PT R + + L+E + GI+H T+ G SW F + I Sbjct: 174 TVVADQFGQPT----WTRDLTDLIWRLVEAKAPT--GIYHGTS-SGKTSWYGFTQEIV-- 224 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 G + V + T +P A RPA+S L L I W Sbjct: 225 -RSLGRNPAMVVPVATADFPRPAPRPAFSVLGHRALEAIGVAPIGQW 270 >gi|296168938|ref|ZP_06850607.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896407|gb|EFG76060.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 296 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 122/233 (52%), Gaps = 14/233 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---LS 108 DV+IN AAYT VD AE + A+++NA G G IAKA G I++STDYVF G Sbjct: 53 DVVINCAAYTNVDGAESDEAGAYAVNATGPGNIAKACARAGARFIHVSTDYVFGGDHAGG 112 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAK 167 P + PT P +YG+SKLAGE+ V + V++RTAWVY+ G +F+ M RLA Sbjct: 113 ARPHEPSDPTAPAGVYGRSKLAGEQAVLTALPGAVVVRTAWVYTGGDGKDFVAVMRRLAA 172 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + VV DQ G+PT +A A++QI D + G A+ G VS + Sbjct: 173 GDGPVKVVADQVGSPTYVGDLAEALLQIV-------DDDVPGPILHAANEGAVSRFEQTR 225 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 IF AE G +V + T ++P A RPAYS L + A + W+ Sbjct: 226 AIF---AECGADPERVLPVSTAEFPRPAPRPAYSALSGRESAAAGLRPLRPWR 275 >gi|228469869|ref|ZP_04054808.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas uenonis 60-3] gi|228308504|gb|EEK17292.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas uenonis 60-3] Length = 300 Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 151/300 (50%), Gaps = 25/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKP-------KDFASFFLSFSP 51 + +++G +GQ+ +SL+ + E++ +D K + ++ Sbjct: 5 RIILLGASGQLGRSLTRELAERGNPYELVSYTHEQLDYTDTESVTRAIKLWEEQAIAHDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +I+N AA+T VD AED+ + + + +P I ISTDYVFDG TP Sbjct: 65 TMIVNCAAFTQVDLAEDKAQ--YRDLLALNALLPAQLAESRLPIIQISTDYVFDGCQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDATNPRSLYGRTKRQGELALLMHPTHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + + VV DQ G+PTSAL +ARAI +I + + S R A+ G SW D A Sbjct: 183 EGKALRVVNDQIGSPTSALSLARAICEIIDCY--DKERSFRTSLLHYANQGICSWYDLAH 240 Query: 228 YIFWESAERGGP---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E+ P S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 241 ----EAIATHVPTYDLSQLTPIPTAEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|266620908|ref|ZP_06113843.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288867425|gb|EFC99723.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 286 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 89/280 (31%), Positives = 141/280 (50%), Gaps = 14/280 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NG++ + ++ + VE++ +D+ PK + P I+N A Sbjct: 6 KVWICGANGRVGRKMTELLENTPVELLLTDLDAVDITDPKAVRDYAGMNRPHFIVNCAGL 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V E+ E AF +NA GA ++ AA I +STD VFDG +TP EF NP Sbjct: 66 TDVAMCEENKEEAFKVNALGARNLSVAARMGKARMIQLSTDDVFDGSGQTPYTEFDTPNP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V + N ++I+R++W++ GS++ +L+LA E + I DQ Sbjct: 126 QTVYGKSKLAGENFVKEFCNRHIIVRSSWIFG-EGSSYFSKILKLAGEGKTIYAASDQTA 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A ++A II++ D++ G++H+T G S +FA+ I S G Sbjct: 185 APTGASELAEKIIELM-------DSAPDGLYHVTGQGS-CSRFEFAQEIVRLS----GHK 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++V + A RP+YS LD L + ++ W+ Sbjct: 233 AEVVPVAAADDKLTAMRPSYSVLDNMMLRMSGIAQLPEWR 272 >gi|300743861|ref|ZP_07072881.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia dentocariosa M567] gi|300380222|gb|EFJ76785.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia dentocariosa M567] Length = 478 Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 24/277 (8%) Query: 3 CLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G +GQ+ + L + Q++ V R +DL P+ + + F S +IN AAYT Sbjct: 188 LLIVGASGQLGRELVRQLTAQNIPFEAVDRDQLDLGTPEKWRNAFRWRSYRAVINAAAYT 247 Query: 62 AVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFS-- 116 AVD AE + A+ NA G +A + +P +++STDYVFDG P+ E+S Sbjct: 248 AVDNAETLEGRREAWVANAHGVAVLASVCEEANLPLVHVSTDYVFDGT--LPVGQEYSVE 305 Query: 117 -PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P PL++YG SK AGE ++ +Y +LRT+WV G NF+ +M LA+ +VV Sbjct: 306 HPIAPLSVYGASKAAGESAATAWRKHY-LLRTSWVVGE-GKNFVATMASLAERGVNPAVV 363 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT +A A + H L + G +H++ G ++WAD A ++ Sbjct: 364 ADQWGRPTFTQDLAGAAL---HLLFTGAPY---GTYHVSNSGEVITWADLARAVY---TG 414 Query: 236 RGGPYSKVYRIFTKQYPTKAH----RPAYSCLDCSKL 268 G ++V T++Y A RPA S LD SKL Sbjct: 415 TGHDAARVSNTTTEEYFANAQVFAPRPANSALDLSKL 451 >gi|288916472|ref|ZP_06410849.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] gi|288352072|gb|EFC86272.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] Length = 269 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 10/211 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+IN AA+T VD AE + + A+++NA G +A A G ++ISTDYVFDG + P Sbjct: 38 VVINTAAWTNVDGAESDEQGAYAVNAAGPAHLAAACAQAGAVLVHISTDYVFDGAASKPY 97 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + P P YG++KLAGEE V ++RTAWVY G NF+ ++ RLA+ER ++ Sbjct: 98 ETTDPPGPRCAYGRTKLAGEEAVLELCPGSYVVRTAWVYGRTGGNFVKTIARLARERDQL 157 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQ G+PT + +A ++ +L+ T G++H T GG +W FA I Sbjct: 158 TVVADQHGSPTWSADLAAGLL----DLVTARPTP--GLYHCTG-GGETTWFGFARAIV-- 208 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G +KV I T ++P A RPAYS L Sbjct: 209 -GALGQDPAKVVPISTAEFPRPAARPAYSVL 238 >gi|313886198|ref|ZP_07819928.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica PR426713P-I] gi|312924377|gb|EFR35156.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica PR426713P-I] Length = 300 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 25/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKP-------KDFASFFLSFSP 51 + +++G +GQ+ +S++ + E++ +D K + ++ Sbjct: 5 RIILLGASGQLGRSITRELAERDNPYELVSYTHEQLDYTDTETVSRAIKLWEEQSAAYDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +++N AA+T VD AED + + + +P I ISTDYVFDG TP Sbjct: 65 TMVVNCAAFTQVDLAEDP--VHYRDLLALNALLPAQLAESHLPIIQISTDYVFDGKQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDRTNPQSLYGRTKRQGELALLMHPMHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + + VV DQ G+PTSA +ARAI +I +++ + R AD G SW DFA Sbjct: 183 EGKSLRVVNDQIGSPTSAPSLARAICEIV--ACYDTERTFRTPLLHYADRGICSWYDFA- 239 Query: 228 YIFWESAERGGP---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +E+ P S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 240 ---YEAIATHLPEYDLSQLTPIPTDEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|188997435|ref|YP_001931686.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932502|gb|ACD67132.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1] Length = 284 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L++G NGQ+ + L ++ Q ++I + R + ++ + PDV+IN AA Sbjct: 1 MKYLILGKNGQLGKEFLKTLENQKKDVIGLSRLECNITNFDKLNQVLSQYKPDVVINSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPT 118 Y VD AE + A +N+ +A ++ I+ STDYVFDG + E Sbjct: 61 YNLVDDAEKQYWEAVKVNSIAVKNLAYLSNVYKFRLIHYSTDYVFDGKKENGLYTEDDVP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YGKSK GE + T NY++ R +WVY NF+ +L AK + V ++ Sbjct: 121 NPLNDYGKSKFMGEIFLREETGNYLLFRVSWVYGEGKQNFIYKLLTWAKNNEYLKVAYNE 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTS R I+ I ++ D LRG+FH+T + G S ++A+ IF R Sbjct: 181 VSVPTS----TRTIVDIT---LKALDNDLRGMFHLT-NSGYASRYEWAKEIF-----RIK 227 Query: 239 PYSKVYRIFTKQ-YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K +K+ + A RP +S + K++ N I W E + L N Sbjct: 228 KIDKFILPVSKEIFNLPAKRPDFSAMSNRKISQILNTEIPYWNEELNEFLKN 279 >gi|24940614|gb|AAN65241.1|AF329398_31 dTDP-4-keto-6-deoxyhexose reductase [Streptomyces roseochromogenes subsp. oscitans] Length = 288 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 13/264 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L + E ++ V R D+D+ + + P I+N AA+ Sbjct: 4 RWLVTGAAGMLGRDLVGVLQGLNESVVAVTRQDLDITDRFSVRAVVSRYQPTTIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A IN G +A I +++STDYVFDG S P E + T+P Sbjct: 64 TRFPEAEVSESEALLINGRGVRELASICSDRSIRLVHLSTDYVFDGTSCQPYAESAATSP 123 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++KLAGE+ V ++ I+RTAW+Y G+NF+ M+RL + R+ + VV DQ+ Sbjct: 124 INAYGRTKLAGEQAVLELLPDDGTIVRTAWLYGRHGTNFIRKMVRLEQMRKTVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A+ I+ + G+FH T+ G +W D A +F G Sbjct: 184 GQPTWTVDLAQQIVALVRQ-------GASGVFHGTSS-GETTWYDIARMVF---RLLGAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL 263 ++ + + Q RP Y+ L Sbjct: 233 PGRIRPVRSDQVAGGELRPRYTVL 256 >gi|89001373|gb|ABD59206.1| InkL [Nonomuraea longicatena] gi|223954221|gb|ACN29711.1| dTDP-dihydrostreptose synthase [Nonomuraea longicatena] Length = 282 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 13/278 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G +A+ L + ++ GR ++DL + S+ P V++N AA Sbjct: 1 MRWLVTGGAGMLARDVLGRAALIGDPVLAPGRAELDLCDGRAVRELVGSYRPRVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE A ++N +A+A G +++STDYVFDG S P E +PT Sbjct: 61 WTAVDDAEAHEAEALAVNGHAVRVLAEACARSGARLLHLSTDYVFDGASAAPYREDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++KLAGE A+ + ++R+AW+Y G+NF +M+RLA + + + VV DQ Sbjct: 121 PVNAYGRTKLAGE--AAALEHGQYVVRSAWLYGAGGANFARTMIRLAGQVQTVDVVDDQR 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++++A + + G++H T+ G +W FA IF G Sbjct: 179 GQPTWTEDLADFLVRLALSDLPP------GVYHGTS-AGATTWYGFAREIF---TLLGAD 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 +V + A RPA S L ++ + R + Sbjct: 229 PGRVRPVAGAALGRVARRPASSVLAHTRWEPIRHWRAA 266 >gi|260577925|ref|ZP_05845855.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium jeikeium ATCC 43734] gi|258603945|gb|EEW17192.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium jeikeium ATCC 43734] Length = 274 Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/296 (33%), Positives = 145/296 (48%), Gaps = 32/296 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINPA 58 M LV G +GQ+ ++L + + + VGR DL SF L+ DV I+N A Sbjct: 1 MSVLVFGASGQVGRALLRL---RPDFVPVGRAHADLAVAGSVDSFLLTPPSDVEAIVNLA 57 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A+TAVD AE +PE + +NA G IA A +P Y+STDYVF G P+ Sbjct: 58 AFTAVDDAE-KPENASVVHQVNAVAPGRIASWAQVHEVPMWYVSTDYVFSG--NLPVGCE 114 Query: 116 SPTN----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +P + PLN YG+SKL GE +V + + ++RT WVY G NF +M RLA+ Sbjct: 115 NPVDGQPGPLNAYGRSKLKGERRVLNLGGH--VVRTGWVYDATGRNFATTMARLARAGVN 172 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +VV DQ+G PT +A + +++ + I H+T G +W FA IF Sbjct: 173 PTVVDDQYGRPTHVDVLAAELAA----MVDGRQSP--AISHVTGSGPLTTWCGFAREIF- 225 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A G ++V + + +YPT A RP S L + W++ +R L Sbjct: 226 --ATLGHDPARVKAVPSSEYPTPARRPHNSALQIPATG------LPAWQDSLRVAL 273 >gi|254821361|ref|ZP_05226362.1| RmlD [Mycobacterium intracellulare ATCC 13950] Length = 295 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 143/285 (50%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ LSS+ Q E++ D+ P A+ + DV+IN AAY Sbjct: 4 RIVIAGAGGQLGGYLSSLAADQGREVLAHSSSQWDITDPA--AAGRIVQRGDVVINCAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTPIDEFS 116 T VD AE + AF++N G G IA+A G I++STDYVF+ G + P + Sbjct: 62 TDVDGAETDEAGAFAVNEAGPGHIARACARAGAQLIHVSTDYVFNGDFGGAAPRPYEPSD 121 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVV 175 T P +Y +SK AGE+ V + V++RTAWVY+ G +F+ M RLA + VV Sbjct: 122 QTAPQGVYARSKAAGEQAVLAALPEAVVVRTAWVYTGGAGKDFVAVMRRLAAGDGPVDVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A++QI + + I H A+ G VS + A +F E Sbjct: 182 DDQIGSPTYVGDLAAALLQIVDDRVPGP------ILH-AANEGAVSRFEQARAVFEEC-- 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G ++V + T+Q+P A RP Y+ L + A + W+ Sbjct: 233 -GADPARVRPVSTEQFPRPAPRPPYTALSSGQSAAAGLRPLRPWR 276 >gi|238560600|gb|ACR46365.1| TDP-4-dehydrorhamnose reductase [Streptomyces peucetius ATCC 27952] Length = 291 Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 7/269 (2%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 L + ++ + GR D+D+ P+ + P V++N AA+T VD AE + E A + Sbjct: 7 LERLAADGIDAVGAGRADLDITDPESVRAAMAEHRPAVVVNCAAWTDVDGAETQEEAALA 66 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 +N G +A+A G +++STDYVF G P E +PT P + YG++KLAGE V Sbjct: 67 VNGTGPRVLAEACKEAGAVLLHVSTDYVFAGDGTKPYAEDAPTGPRSAYGRTKLAGEGAV 126 Query: 136 AS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ 194 + ++RTAW+Y G NF+ +M++L + + VV DQ G PT + +A +++ Sbjct: 127 LDLLPDTGHVVRTAWLYGAGGPNFVRTMIKLEAVKDTLDVVDDQRGQPTWTVDLADRLVR 186 Query: 195 IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 + + + T G+ H T+ G +W F IF G +V + + Sbjct: 187 LGQGAL--AGTVKAGVHHGTSS-GETTWFGFTREIF---RLLGADPERVRPTTSAAFVRP 240 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A RP+YS L I W+E + Sbjct: 241 APRPSYSVLGHEGWRAMGIEPIRDWREAL 269 >gi|145225314|ref|YP_001135992.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|145217800|gb|ABP47204.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] Length = 274 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 15/244 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---- 107 D+++N AA T VD AE PE + ++NA GAG +A+A +G I++STDYVF G+ Sbjct: 36 DIVVNCAAITNVDLAEAVPERSRAVNAVGAGNVARACAQVGASLIHLSTDYVFSGVFGGD 95 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLA 166 S P D PL++YG++KLAGE V + N ++RT+W++ G++F M R A Sbjct: 96 STRPYDIDDEPAPLSVYGRTKLAGEHAVLAALPNAYVVRTSWIFEGGNGADFAAVMRRAA 155 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 +I +V DQ G+PT + A++QIA D +RG A+ G S D A Sbjct: 156 AGSGDIEMVADQIGSPTYVGDLCAALLQIA-------DGGVRGPLLHAANAGSASRFDQA 208 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +F AE G +V+ I ++P A RP+YS L +K + W+ + Sbjct: 209 QAVF---AELGADPGRVHPISGDRHPRPAPRPSYSALAATKSTAAGLTPLRPWRAALAEA 265 Query: 287 LVNI 290 L + Sbjct: 266 LATM 269 >gi|332299683|ref|YP_004441604.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica DSM 20707] gi|332176746|gb|AEE12436.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica DSM 20707] Length = 300 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/300 (30%), Positives = 153/300 (51%), Gaps = 25/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKP-------KDFASFFLSFSP 51 + +++G +GQ+ +S++ + E+ +D K + +++ Sbjct: 5 RIILLGASGQLGRSITRELAERDNPYELASYTHEQLDYTDTETVSRAIKLWEEQAVAYDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +++N AA+T VD AED + + + +P I ISTDYVFDG TP Sbjct: 65 TMVVNCAAFTQVDLAEDP--VHYRDLLALNALLPAQLAESHLPIIQISTDYVFDGKQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDRTNPQSLYGRTKRQGELALLMHPTHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + + VV DQ G+PTSA +ARAI +I +++ + R AD G SW DFA Sbjct: 183 EGKSLRVVNDQIGSPTSAPSLARAICKII--ACYDTERTFRTPLLHYADRGICSWYDFA- 239 Query: 228 YIFWESAERGGP---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +E+ P S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 240 ---YEAIATHLPEYDLSQLTPIPTAEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|3256060|emb|CAA07388.1| StrL [Streptomyces glaucescens] Length = 305 Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 13/284 (4%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G +G + + L S V V ++R R D+D+ P + P V++N Sbjct: 8 RWLVTGASGMLGRELTARLSRRGVPVVPLVR--RADLDVTDPAAARALLARHRPAVLVNC 65 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AA+TAVD AE A ++N EG G +A+A + G I +STDYVF GL+ P E P Sbjct: 66 AAWTAVDAAEAHEARALAVNGEGPGHLARACRATGTRMIQLSTDYVFAGLADRPYREDDP 125 Query: 118 TNPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P YG++KLAGE V + + ++RTAW+Y G+NF+ +M+RLA + VV Sbjct: 126 PAPRTAYGRTKLAGERAVLDTLPDGGYVVRTAWLYGSGGANFVSTMIRLAAAEGTVPVVD 185 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT + A +A T+ G++H + G +W A IF + Sbjct: 186 DQHGGPTWTGDL--ADRLLALGAAALRGTAPPGVYHAV-NAGSTTWHALAREIFRRA--- 239 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V I + + A RP YS L + + W+ Sbjct: 240 GADPGRVRPIGSGELARPAARPPYSVLAQGRWRAAGLAPLRDWR 283 >gi|257452250|ref|ZP_05617549.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_5R] gi|317058793|ref|ZP_07923278.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium sp. 3_1_5R] gi|313684469|gb|EFS21304.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium sp. 3_1_5R] Length = 470 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 142/289 (49%), Gaps = 18/289 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINPA 58 + L++G NGQ+ ++ + + IR DID L K F +IN A Sbjct: 193 RVLILGGNGQLGKAFQKFIQK--KKIRYQAVDIDTLDITDEKKCREFLEKNFFHCVINCA 250 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VDKAE E E ++NA+ IP I STD+VFDG P E Sbjct: 251 AYTDVDKAELELERCKTVNADAIKLWIDLCRERQIPFITFSTDFVFDGTGDEPYSEEKDP 310 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP++ YGK+KL GE+ Y VI R++W++S G+NF +L +K+++EI +V DQ Sbjct: 311 NPISWYGKTKLEGEKNALCYEKALVI-RSSWLFSNEGTNFCKKVLTWSKQKKEIHIVDDQ 369 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 TPT R ++ L E + G++HM++ G S D A+Y+ + G Sbjct: 370 ISTPT----YVRDLVYFTWLLYEK---ACFGLYHMSS-SGECSKYDLAKYLLSSISWNGI 421 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + R ++++ +A RP YS L C KL + WK+ V++ L Sbjct: 422 ----LERASSEEFENRAERPKYSKLYCMKLQREVGKPLPYWKKAVQHFL 466 >gi|68536735|ref|YP_251440.1| hypothetical protein jk1647 [Corynebacterium jeikeium K411] gi|68264334|emb|CAI37822.1| rmlD [Corynebacterium jeikeium K411] Length = 274 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 145/296 (48%), Gaps = 32/296 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINPA 58 M LV G +GQ+ ++L + + + VGR DL SF L+ DV I+N A Sbjct: 1 MSVLVFGASGQVGRALLRL---RPDFVPVGRAHADLAVAGSVDSFLLTPPSDVEAIVNLA 57 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A+TAVD AE +PE + +NA G IA A +P ++STDYVF G P+ Sbjct: 58 AFTAVDDAE-KPENASVVHQVNAVAPGRIASWAQVHEVPMWHVSTDYVFSG--NLPVGCE 114 Query: 116 SPTN----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +P + PLN YG+SKL GE +V + + ++RT WVY G NF +M RLA+ Sbjct: 115 NPVDGQPGPLNAYGRSKLEGERRVLNLGGH--VVRTGWVYDATGRNFATTMARLARAGVN 172 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +VV DQ+G PT +A + +++ + I H+T G +W FA IF Sbjct: 173 PTVVDDQYGRPTHVDVLAAELAA----MVDGRQSP--AISHVTGSGPLTTWCGFAREIF- 225 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A G ++V + + +YPT A RP S L + W++ +R L Sbjct: 226 --ATLGHDPARVKAVPSSEYPTPARRPHNSALQIPATG------LPAWQDSLRAAL 273 >gi|258654332|ref|YP_003203488.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM 44233] gi|258557557|gb|ACV80499.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM 44233] Length = 302 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 10/228 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+IN AAYTAVD AE + + A+++NA G +A+A + G+ I++STDYVF G R P Sbjct: 68 VLINAAAYTAVDAAESDRDAAYAVNATGPQNLARACAACGVRLIHVSTDYVFPGDGRRPY 127 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + PT P ++YG SKLAGE+ V + ++RTAWV+ G+NF+ +M LA R + Sbjct: 128 EIDDPTGPRSVYGASKLAGEQAVLASLAGAQVVRTAWVWGTTGANFVKTMAALAASRPTV 187 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 VV DQ G+PT A +A ++++A + + G+ H T + G +W +FA IF E Sbjct: 188 DVVDDQRGSPTYAADLAAGLLELAGSDVPG------GVLHAT-NAGETTWYEFARAIFAE 240 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 E G +V+ + ++ A RPAYS L + A + W+ Sbjct: 241 LGEDPG---RVHPTTSDKFLRPAPRPAYSVLSGAAWAAAGLNPLRPWR 285 >gi|78044837|ref|YP_359825.1| dTDP-4-dehydrorhamnose reductase [Carboxydothermus hydrogenoformans Z-2901] gi|77996952|gb|ABB15851.1| dTDP-4-dehydrorhamnose reductase [Carboxydothermus hydrogenoformans Z-2901] Length = 283 Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 20/295 (6%) Query: 1 MKCLVI-GNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK +VI G GQ+ ++ + + +E + + R ++D+ FL+F P +IN A Sbjct: 1 MKKIVIAGAGGQLGKAFTKKLQSLGIECLPLTRKELDITDLHLLKELFLNFRPQYLINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VDKAE+E E A +N I A I+ STDYVF+G P Sbjct: 61 AYNEVDKAEEEKEKALLVNGIALRYIGNLAAQYQTTVIHYSTDYVFNGEKEEPYLISDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N YG++KL GE+++ ++ ++R +WV+ NF+ +L A + ++ +V DQ Sbjct: 121 KPINHYGRTKLLGEKEILTHNPKTYVIRVSWVFGDGEQNFIYKLLNWASKNEKLKIVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADF-AEYIFWESAE 235 +PT I++I +LI+ T G++ ++ +G WA F +Y+ W+ Sbjct: 181 VSSPT----YTEEIVKITLDLIK---TEQYGLYQLSGEGQASRYDWAKFILDYLNWQ--- 230 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + +PTKA RP YS L L N TW+E L + Sbjct: 231 -----GELIPAASHDFPTKAKRPRYSKLSNLPLKNLLGYLPETWQESTEKYLKEL 280 >gi|254167999|ref|ZP_04874847.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|289595932|ref|YP_003482628.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|197623042|gb|EDY35609.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|289533719|gb|ADD08066.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] Length = 283 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 142/289 (49%), Gaps = 20/289 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +IG NGQ+ L + + + + D+D+ D PDVIIN AAY Sbjct: 1 MKVAIIGANGQLGSDLVEVFGEIA--VPLTHRDLDVTN-YDSLKILKKIDPDVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF++NA GA +AK A+ + +YISTDYVFDG P E NP Sbjct: 58 VRVDDAEKEPKKAFNVNAIGALYVAKIANKLDAINVYISTDYVFDGRKGAPYTEEDMPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y I+R A +Y G NF+ ++ A+ EI VV Sbjct: 118 INVYGASKYMGEIFTRNYSKKYYIVRVASLYGKKGARGKGGNFVNWIIEKARRGEEIKVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +A + ++ E GI+HM +G SW +FA+ E Sbjct: 178 DDIIMSPTYTRDVAETLKKLLERKPE------YGIYHMVNEGY-CSWYEFAK----EIVN 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G + I + + A RP +S L+ K+ + +R+S WK ++ Sbjct: 227 ILGFEIPIKPIGSNELIRLARRPKFSALENKKIHDVA-LRLSPWKSALK 274 >gi|220925353|ref|YP_002500655.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] gi|219949960|gb|ACL60352.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] Length = 303 Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 104/285 (36%), Positives = 140/285 (49%), Gaps = 3/285 (1%) Query: 4 LVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ L DV I R +D+ A+ S +IN AAYTA Sbjct: 6 LILGGGGQVGTELQLHAWPADVAIHAPAREALDITDETAVAAALTERSYAAVINTAAYTA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E A+ +NA +A A GIP + +STDYVFDG +P P + Sbjct: 66 VDKAESEIGAAWRLNALAPAYLAAATARAGIPLVQVSTDYVFDGTGAGAYLPEAPVQPTS 125 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK AGE V + + ++RTAWV S NF+ +MLRLA ER + VV DQ G P Sbjct: 126 VYGASKAAGELAVRTGNPRHAVVRTAWVVSPHRGNFVKTMLRLAGERDGLRVVDDQRGCP 185 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T+A +A A+ IA L E+ + G +H + G +W FA I + RG Sbjct: 186 TAAADLAAALATIALRLAEDP-AAPTGTYHCV-NAGATTWCGFARAIMAGAQARGARAVP 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + +PT A RPA S L + L I W + +IL Sbjct: 244 VEPIPSSAFPTPARRPANSELSTASLTRDFGIVPRPWPAALDDIL 288 >gi|212634463|ref|YP_002310988.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3] gi|212555947|gb|ACJ28401.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3] Length = 370 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 41/246 (16%) Query: 1 MKCLVIGNNGQIAQSLS-----------------------------------SMCVQDVE 25 +K +V G NGQ+AQSL+ S+ QD E Sbjct: 5 IKIMVTGGNGQLAQSLALIAHLSDAKVKASSFTRITADIVQALVNILPEVRNSLSEQD-E 63 Query: 26 IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 + + +D+ F+ +PDV+IN AA+ AVD AE + E AF +N EG +A Sbjct: 64 LHLLSHRKLDICDSAAIDDAFMRVNPDVVINCAAFNAVDNAETDSESAFKVNFEGPKLLA 123 Query: 86 KAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVI 144 + G+ I+IS+D+VF G +P +E PL++YGKSKLAGE+ V + I Sbjct: 124 ERCKRDGVMLIHISSDFVFAGEKHSPYNEQDLPEPLSVYGKSKLAGEQAVRQVIASKAYI 183 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 +RT+W+YS G+NF+ +M +L + ++SV+ DQ+G+PT + A+ I LI+ + Sbjct: 184 IRTSWLYSCQGNNFVHTMQKLFAAKEQVSVIADQYGSPT----WSEALAVIIFKLIKQKE 239 Query: 205 TSLRGI 210 + RG+ Sbjct: 240 ATQRGV 245 >gi|257465949|ref|ZP_05630260.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium gonidiaformans ATCC 25563] gi|315917105|ref|ZP_07913345.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium gonidiaformans ATCC 25563] gi|313690980|gb|EFS27815.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium gonidiaformans ATCC 25563] Length = 475 Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 138/288 (47%), Gaps = 14/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G NGQ+ + + +E + + +D+ K FF+ +IN AAYT Sbjct: 195 LILGGNGQLGKEFQKFLQKKMIEYQAIDKDALDVSNEKKCREFFIQKHYCCVINCAAYTN 254 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E E ++N + K + IP I STD VFDG P E NP+N Sbjct: 255 VDLAEKEKEECKAVNTDAVRIWTKMCEEKEIPFITFSTDMVFDGKDEFPYTEEDMPNPVN 314 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YGK+KL GE+ Y+ + VI RT+W++S G NF L AK + + +V DQ +P Sbjct: 315 WYGKTKLEGEKFALQYSRSLVI-RTSWLFSTEGDNFCKKALLWAKNQETLRIVDDQISSP 373 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TS IA ++ + G++HM+ G S D Y+ + +G + Sbjct: 374 TSVEDIAVFTWKLYQK-------ACFGLYHMSG-MGESSKYDQIRYLLSLFSWKG----R 421 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R T+++ A+RP YS L C KL + + WK+ ++ N+ Sbjct: 422 IERAKTEEFWNLANRPKYSKLCCMKLYGALGLSLPYWKKSIQYFAKNL 469 >gi|294102763|ref|YP_003554621.1| dTDP-4-dehydrorhamnose reductase [Aminobacterium colombiense DSM 12261] gi|293617743|gb|ADE57897.1| dTDP-4-dehydrorhamnose reductase [Aminobacterium colombiense DSM 12261] Length = 291 Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 27/299 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+A + + ++ + R ++D+ PDV+IN AA Sbjct: 1 MKFFITGGGGQLALAFQRLLKEENLPFAVYSRQELDITDITRVRKRMQEEKPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + VD AE A+ +NA G +A AA+ +GIP + S+DYVF+G S + Sbjct: 61 WNDVDSAEQNWRGAYMVNAIGPRNLAIAAEELGIPLVTFSSDYVFNGKSVRSWTIADKPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERREISVVC 176 P+N+YG++KL GEE V + ++I+R +WV+ G SNFL +LR ++E+ E+ +V Sbjct: 121 PINVYGQTKLLGEEFVKDHIRRFLIVRVSWVFGPEGREESNFLKKVLRWSREKDELKIVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADG--GPVSWADFA-EYIFW 231 DQ +PT A +A ++++ +LR G +H++ G WA FA + I W Sbjct: 181 DQISSPTYAPDLAERVMEL---------LTLRAWGTYHLSCSGRCSRYEWASFALKEIGW 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + + ++ T A RPA S LD L I + W++ L I Sbjct: 232 K--------KNIVQAQSNEFRTLAQRPAMSSLDSFPL-EEFGIFMPRWEDSTLRFLKAI 281 >gi|302524296|ref|ZP_07276638.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. AA4] gi|302433191|gb|EFL05007.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. AA4] Length = 294 Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 147/295 (49%), Gaps = 13/295 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDF--------ASFFLSFSPD 52 + LV G +GQ+ + L + + E++ ++D+ + + Sbjct: 3 LAVLVPGGSGQLGRDLVNTAGPETEVLAPSSAELDITAAGQVIAAVGELAERAAAAGAVP 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+IN AAYTAVD AE + AF++N +G +A A S +P I++STDYVF G P Sbjct: 63 VVINAAAYTAVDAAETDEARAFAVNVDGPRVLAAACTSRRVPLIHVSTDYVFPGDGDRPY 122 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + P N YG++K AGE+ V + ++RT+WVY G+NF+ +M RL ER ++ Sbjct: 123 EVDDALGPKNAYGRTKAAGEDAVLGSGASAWVVRTSWVYGKTGANFVETMRRLESERDQL 182 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 SVV DQ G PT + +AR + ++A + + + + H T GG SW FA IF Sbjct: 183 SVVDDQIGAPTWSADLARGLWELAGAIAAGQGPAGK-VLHCTG-GGETSWYGFARAIF-- 238 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +V T+++P A RPAYS L + + W+ + + L Sbjct: 239 -EEIGADPDRVKPCTTEEFPRPAARPAYSLLSNASWREAGLTPLRDWRTALNSYL 292 >gi|289641469|ref|ZP_06473632.1| dTDP-4-dehydrorhamnose reductase [Frankia symbiont of Datisca glomerata] gi|289508679|gb|EFD29615.1| dTDP-4-dehydrorhamnose reductase [Frankia symbiont of Datisca glomerata] Length = 297 Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 16/290 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEI---IRVGRPDIDLLKP-------KDFASFFLSFSPDV 53 +V G GQ+ L + D + + R ++D+ P +D A V Sbjct: 1 MVTGAGGQLGVDLCRLLEADERVHAWAGLTRVELDVTDPARVRAVVRDQARPAKIQGGLV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AA+T VD AE + A+++NA +A A +G ++ISTDYVFDG + P + Sbjct: 61 VVNTAAWTDVDGAESDEAGAYAVNAAAPAHLAAACAEVGATLVHISTDYVFDGAADKPYE 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 PT P + YG++KLAGE+ V + + ++RTAWVY G NF+ ++ RLA+ER ++ Sbjct: 121 TDHPTAPRSAYGRTKLAGEQAVLALCPSSCVVRTAWVYGASGRNFVRTIARLARERDTLA 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G+PT ++ +A +I + S I+H T GG +W FA I Sbjct: 181 VVDDQRGSPTWSVDLAVGLIDLVSAAGAGRAASG--IYHCTG-GGDTTWFGFARAIV--- 234 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE G KV T +P A RP+YS L + + W+E + Sbjct: 235 AELGMDPEKVRPTTTDAFPRPAPRPSYSVLSPRSWTDAGLRPLRPWREAL 284 >gi|218674076|ref|ZP_03523745.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli GR56] Length = 145 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/145 (53%), Positives = 99/145 (68%), Gaps = 1/145 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAVGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVI 144 P+++YG+SKLAGE VA+ N+VI Sbjct: 121 PISVYGRSKLAGETAVAAANPNHVI 145 >gi|5814319|gb|AAD52187.1|AF144879_26 unknown [Leptospira interrogans] Length = 306 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE+ + + N I+RT+WVYS G+NF ++++L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELRV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FWE 232 + DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFSH 241 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S +Y I T+ YPT A RP YS LD + + + W+E + Sbjct: 242 SFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLDETRKIFGV-VPHWREDL 291 >gi|254168139|ref|ZP_04874986.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|197622905|gb|EDY35473.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] Length = 284 Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 145/295 (49%), Gaps = 20/295 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +IG NGQ+ L + + + + D+D+ D P+VIIN AAY Sbjct: 1 MKVAIIGANGQLGSDLVEIFGE--RAVPLTHNDLDVTN-YDSLKILKKIDPNVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF++NA GA +AK A+ + +YISTDYVFDG P E NP Sbjct: 58 VRVDDAEKEPKKAFNVNAIGALYVAKIANELDAINVYISTDYVFDGRKGAPYTEEDMPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y ++R A +Y G NF+ ++ AK EI VV Sbjct: 118 INVYGASKYMGEIFTRNYSKKYYVVRVASLYGKKGARGKGGNFVNWIIEKAKGGEEIKVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +A+ + ++ E GI+HM A+ G SW +FA+ I + Sbjct: 178 DDIIMSPTYTRDVAKTLKKLLEIKPE------YGIYHM-ANEGYCSWYEFAKSIL----D 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + I + + A RP +S + + +R+ W+E +R L +I Sbjct: 227 IIGYRISLKSIKSVELNRLAKRPIFSAIKNKNIKRI-GLRMPKWEEAIRKYLEDI 280 >gi|45657973|ref|YP_002059.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|1666506|gb|AAB47841.1| RmlD [Leptospira interrogans] gi|45601214|gb|AAS70696.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 306 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE+ + + N I+RT+WVYS G+NF ++++L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGEKWIRNTFANSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHELRV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FWE 232 + DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFSH 241 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S +Y I T+ YPT A RP YS LD + + + W+E + Sbjct: 242 SFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGV-VPHWREDL 291 >gi|289451078|gb|ADC93994.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Autumnalis] Length = 306 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 25/294 (8%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV------ILRTAWVYSIFGSNFLLSMLRLAKE--RRE 171 P IYG SK GE+ + N +V I+RT+WVYS G+NF ++++L ++ R E Sbjct: 125 PKGIYGLSKAEGEKWI---RNTFVDSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHE 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI-- 229 + V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 182 LRVIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRD 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 F S +Y I T+ YPT A RP YS LD + + + W+E + Sbjct: 239 FSHSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGV-VPHWREDL 291 >gi|239628292|ref|ZP_04671323.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518438|gb|EEQ58304.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 297 Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/280 (30%), Positives = 140/280 (50%), Gaps = 14/280 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NG++ + L+ + + VE++ +D+ D + P IIN A Sbjct: 3 KIWICGANGRVGRKLTGLLRSEPVELLLTDVDSVDITVSGDVMEYAGMNRPHFIINCAGL 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T + + + EPE+AF +NA GA ++ AA + STD VFDG SR P EF P Sbjct: 63 TDLARCQREPELAFKVNALGARNLSVAARMGKARLVQFSTDDVFDGDSREPYTEFDTPGP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSKLAGE V + + ++I+R++W++ GS +L +LR+A++ + I DQ+ Sbjct: 123 QTIYGKSKLAGENFVREFCSRHIIIRSSWIFGA-GSPYLGQILRMAEQGQVIHAAADQYA 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A ++A +++ ++ + G++H+T G S +FA E+ G Sbjct: 182 APTGAEELAEKTVELMYHGED-------GLYHVTGQ-GSCSRYEFAR----EAVRLSGTG 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + V + A RP+YS LD L + + WK Sbjct: 230 APVMQARGGDDDLNALRPSYSVLDNMMLRISGIALLPDWK 269 >gi|328544170|ref|YP_004304279.1| dTDP 4-dehydrorhamnose reductase (DTDP-L-rhamnose synthetase) [polymorphum gilvum SL003B-26A1] gi|326413913|gb|ADZ70976.1| dTDP 4-dehydrorhamnose reductase (DTDP-L-rhamnose synthetase) [Polymorphum gilvum SL003B-26A1] Length = 290 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 21/296 (7%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK +++G NGQ+ + ++ +++ + R +DL + + S DV+IN Sbjct: 1 MKAILLGPNGQLGTDIVRANTALGAPLDLHPLDRQALDLTDFETVRTVLGSADFDVLINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFS 116 ++Y D E ++ ++NA +A+ + +++STDYVF G S RTP+ E Sbjct: 61 SSYHKTDDVEQNAQLGVTVNAHLVQLLARLCEQRAARFVHVSTDYVFGGQSKRTPLSEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERRE 171 PT P+N+YG SK GE +LR A ++ I G+ NF+ +M+R +E+ Sbjct: 121 PTAPVNVYGASKAMGETLATLACARTTVLRVASLFGIAGASGKGGNFVETMIRFGREKGA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ +PTS IA +I + +E GI+H+ + G +W FAE I Sbjct: 181 LRVVADQHMSPTSTYDIATTLIDMLKADVEP------GIWHVV-NSGDATWHAFAEEIIR 233 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ G + V I + ++PT A RP YS L +K+A R W +R+ L Sbjct: 234 QT----GIAATVEPITSAEFPTPAMRPPYSVLSNAKVAAVVGER-RHWTVALRDYL 284 >gi|147678912|ref|YP_001213127.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] gi|146275009|dbj|BAF60758.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] Length = 296 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+IG++G I Q+L + + EII G +D+ P + P ++IN AA Sbjct: 7 QRVLIIGSSGTIGQALIPELKKLNAEIITPGHNILDITNPYQTKDYIHQVRPSLVINAAA 66 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T V+K+E E A+ INA G +AK P ++ STD+VF G + P E N Sbjct: 67 FTDVEKSEKEQLKAWKINAYGPLIVAKICAEQQTPLVHFSTDFVFSGEKKQPYTEEDRFN 126 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS---NFLLSMLRLAKERREISVVC 176 PLN+YG +K AG+ V+ T+ Y I+RT+ ++ + S +F+ ++ + + +V Sbjct: 127 PLNVYGTTKAAGDLFVSHVTDQYYIIRTSRLFGMGKSRRKDFVQRIIEAITSQPYLKIVD 186 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ T + +A+ +I + + GI+++ + G SW FA I + Sbjct: 187 DQVACYTYSNDLAKWLIALFKT------NARYGIYNL-CNKGECSWYKFAREIL---KLK 236 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + K+ I T ++P+ A RP YS L K I+ TW+E ++ + Sbjct: 237 GLSFYKIKPIKTAEWPSLAKRPLYSSLSTKKFELVTGIKPRTWQEALKEYI 287 >gi|329118000|ref|ZP_08246713.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] gi|327465888|gb|EGF12160.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] Length = 316 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 9/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ +++ + E+I +D+ + A+ +F PD +IN AA+ Sbjct: 27 MRILLTGAKGQLGRAVRDRLPDEWELIATDSKTLDITDREAVANMLENFQPDAVINTAAF 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AED F++NAEG +A+AA ++G +++S+DYVFDG SR P E P NP Sbjct: 87 AGSAAAEDRAARFFAVNAEGTRNLAQAAFAVGAKFVHLSSDYVFDGKSRLPYAETDPPNP 146 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE + V++RT+W+YS G NF+ +L A I + D G Sbjct: 147 QCVYGRSKLAGELLALAAEPATVVVRTSWIYSAHGGNFVTRLLDRAAAGDAIRLAADNAG 206 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A A+I + +G+ H G S FA+ + AER + Sbjct: 207 CPTYAPDLAAALIGLLR-----LPRFPQGLLHYCG-GQAFSEYTFAQAVLQLEAERNPVF 260 Query: 241 SKVYRIFTKQYPTKAHR--PAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 I HR P YS LDC+K A + +W++ + L Sbjct: 261 KMPELIPVPSAELHQHRNAPLYSVLDCAK-ARSLGFTPGSWQKNLAETLA 309 >gi|282861855|ref|ZP_06270919.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. ACTE] gi|282563671|gb|EFB69209.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. ACTE] Length = 294 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 142/285 (49%), Gaps = 14/285 (4%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G G +A+ L+ + ++ + GR +D+ + F P V++N AA+TA Sbjct: 6 LVTGAAGMLARDVLARLAGEEATPVAAGRDVVDITDAASVRAAFEEHRPAVVVNCAAWTA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + E A +N GA +A+A G + +STDYV G + P E + T P + Sbjct: 66 VDDAESQEEAALRVNGTGARILAEACREHGAVLLQVSTDYVLAGDAEQPYAEDAATGPRS 125 Query: 123 IYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG++KL GE V YV+ RTAW+Y G NF+ +M++L + + VV DQ G Sbjct: 126 AYGRTKLEGERAVLDVLPEAGYVV-RTAWLYGAGGGNFVRTMIKLEDVKDTLDVVDDQRG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A ++++ + + T+ G++H T+ GG +W IF G Sbjct: 185 QPTWTVDLADRLVRLGQGAL--AGTAPAGVYHGTS-GGETTWFGLTREIF---RLLGADP 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL--DCSKLANTHNIRISTWKEGV 283 +V ++ + A RPA+S L D K A IR W++ + Sbjct: 239 DRVRPTTSEVFVRPAPRPAFSVLGHDRWKAAGIEPIR--DWRDAL 281 >gi|24214360|ref|NP_711841.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Lai str. 56601] gi|24195293|gb|AAN48859.1|AE011344_3 dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Lai str. 56601] Length = 306 Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 151/294 (51%), Gaps = 25/294 (8%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IY+STD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYVSTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV------ILRTAWVYSIFGSNFLLSMLRLAKE--RRE 171 P IYG SK GE+ + N +V I+RT+WVYS G+NF ++++L ++ R E Sbjct: 125 PKGIYGLSKAEGEKWI---RNTFVDSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHE 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI-- 229 + V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 182 LRVIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRD 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 F S +Y I T+ YPT A RP YS LD + + + W+E + Sbjct: 239 FSHSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGV-VPHWREDL 291 >gi|269121009|ref|YP_003309186.1| dTDP-4-dehydrorhamnose reductase [Sebaldella termitidis ATCC 33386] gi|268614887|gb|ACZ09255.1| dTDP-4-dehydrorhamnose reductase [Sebaldella termitidis ATCC 33386] Length = 286 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 16/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPA 58 MK L+ G+NGQ+ ++ + +VE ++D+ FF + + D+IIN A Sbjct: 1 MKILLTGSNGQLGYDFQNLFDKLEVEYYATDYNELDITNDNKLEKFFNENKNFDIIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VDKAE + E + +N+E +A+ G + STD+VFDG ++P E Sbjct: 61 AYNDVDKAETDKEKCYLLNSEAPTKLAEICKKTGAVFMTYSTDFVFDGERKSPYTEKDTP 120 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NPL++YGKSK GE V +Y +YVI RT+WV+ I +NF ++ +K + ++++V D Sbjct: 121 NPLSVYGKSKYKGESDVLNAYEKSYVI-RTSWVFGIANNNFNKQVINWSKAKNKLNIVDD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q PT + +A + + LI+ T G++H+ ++ G S + A+Y+ E+ Sbjct: 180 QVSVPTYSKDLA----EFSWELIK---TGKFGLYHI-SNSGECSKFEQAKYVL----EKI 227 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G K+ TK + A R Y+ L K +I WK+ + L Sbjct: 228 GWNGKLETAKTKDFKLPAARAEYTKLSSEKTEKLLGKKIPDWKDAIDRFL 277 >gi|7688725|gb|AAF67512.1|AF170880_19 NovS [Streptomyces caeruleus] Length = 288 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/231 (32%), Positives = 119/231 (51%), Gaps = 10/231 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L ++ E ++ + R D+D+ + P I+N AA+ Sbjct: 4 RWLVTGAAGMLGRDLVALLRGLNEPVVAITRHDLDITDRLSVRAVVDRHRPTTIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A +N GA +A I +++STDYVFDG SR P E + T+P Sbjct: 64 TRFGEAEAGESAALLVNGGGARELAAVCRDRSIRLVHLSTDYVFDGTSRRPYAESAVTSP 123 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++K AGE+ V ++ I+RTAW+Y G NF+ M+RL + R + VV DQ+ Sbjct: 124 INAYGRTKQAGEQAVLDLLPDDGTIVRTAWLYGRHGMNFIRKMVRLEQLRETVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 G PT + +A+ I+ + + G+FH T+ G +W D A F Sbjct: 184 GQPTWTVDLAQQIVALVRH-------GASGVFHGTS-AGEATWYDLARMTF 226 >gi|257468057|ref|ZP_05632153.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] gi|317062343|ref|ZP_07926828.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] gi|313688019|gb|EFS24854.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] Length = 475 Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 86/285 (30%), Positives = 146/285 (51%), Gaps = 14/285 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+ Q + + ++ ++D+ + F + +IIN AAY Sbjct: 195 LLTGADGQLGQDFQKLFDKLSIKYTATDYRELDVTDKEKVKEFVDNHDFTMIINCAAYNN 254 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E E +++N+ + + I + STD+VFDG P E TNPL+ Sbjct: 255 VDKAEEELEKCYALNSHVPKYLVEICKEKNIAFVTYSTDFVFDGEKEIPYTEEDITNPLS 314 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IY K+KL GE+ Y ++VI RT+WV+ + +NF ++ +K + ++ +V DQ +P Sbjct: 315 IYSKAKLEGEKYSLGYDKSFVI-RTSWVFGMGNNNFCKQVINWSKGKDKLRIVDDQISSP 373 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A + + LI+ T G++H++ D G S + A+YI ++ G Sbjct: 374 TYSKDLA----EYSWELIQ---TGKYGLYHLSND-GEASKFEQAQYIL----KKIGWTGV 421 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + R T+++P A R YS LD SK+ + +I WK G+ L Sbjct: 422 LERGKTEEFPLSAKRAQYSKLDSSKIEKIIDRKIPHWKTGIDRFL 466 >gi|296138790|ref|YP_003646033.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola DSM 20162] gi|296026924|gb|ADG77694.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola DSM 20162] Length = 321 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 21/298 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G GQ+ +L + +R + R D+D+ + A+ L ++IN A+TA Sbjct: 21 VITGAAGQLGSALVAAAADRGLAVRGLTRADLDVTSSQAVAALDLDVD-TLLINCVAHTA 79 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF---SPTN 119 VD AE EP+ A +N G +A+ G ++ISTDYVF G + TP + PT Sbjct: 80 VDAAESEPDAAALLNERVPGRLARRCAQTGARLVHISTDYVF-GPAPTPAHPWEPGDPTG 138 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SIFGSNFLLSMLRLAKER 169 P ++YG++KL GE + V++RTAWVY + + +F+ +M RLA + Sbjct: 139 PASVYGRTKLDGERAARAADPRTVVVRTAWVYTGRTAGPDGHTAWAPDFVGTMGRLADQG 198 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + +VV DQ G+PT A +A ++ +A + +++ G A GG +W D A + Sbjct: 199 ADPAVVADQTGSPTYAPDLAAGLLDLAD--LFSAEPGRPGTVLHAAGGGTATWFDVARGV 256 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 F A G +V T +P A RPAYS L A + W++ + L Sbjct: 257 F---ARTGADPERVTPCTTADFPRPAPRPAYSVLSPVAWAAAGLTPLPDWRDALDRAL 311 >gi|260061271|ref|YP_003194351.1| spore coat polysaccharide synthesis dTDP-4-dehydrorhamnose reductase [Robiginitalea biformata HTCC2501] gi|88785403|gb|EAR16572.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Robiginitalea biformata HTCC2501] Length = 258 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 16/264 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +V G +GQ+ +S+ + EI + + + +D+ + ++ F +P+ IN AA+T Sbjct: 5 IVTGADGQLGKSIQARIGSYDEINGVFLSKESLDITRVEEIRKRFKEHAPEYCINTAAFT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE + A +NA GA +A+A + I++STDYVFDG NP+ Sbjct: 65 EVDEAEVAEDKAMEVNACGAENLARACAEFRVILIHLSTDYVFDGSKPHGYRPTDKPNPI 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG+SK GE+++ + Y I+RT+W+YS + NF ++L + + V Q G Sbjct: 125 NAYGRSKWEGEKRIGKCLDRYFIIRTSWLYSEYPPNFFTTILNRLNKNENLEVTDQQRGC 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A +A+ I++ LI + D GI H T DG P++W +FA I R P Sbjct: 185 PTKAGNLAKYILE----LITSDDQDF-GIRHFT-DGEPMTWYEFALRI----KNRYAPDS 234 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCL 263 SK+ R Y + A RP S L Sbjct: 235 TSKIRR--GNNYRSFAKRPECSIL 256 >gi|156741680|ref|YP_001431809.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] gi|156233008|gb|ABU57791.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] Length = 280 Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 146/285 (51%), Gaps = 18/285 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G GQ+ ++L + EII + D+DL + D ++ +I+PAAY Sbjct: 1 MRIAVTGAGGQLGKALQRVLSDAHEIIPLNHADLDLER-SDCVQALVATDAQCVIHPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P+ A+ +NA G +A A ++ P +Y+ST+ VFDG + +P E+ P Sbjct: 60 THVDGCARDPDRAYRVNALGTRYVALACQALDAPLVYVSTNEVFDGTATSPYLEYDRPAP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERREISVVCDQ 178 +N YG SK AGE+ V + I+R AW +FG NF+ ++LRLA ER EI++V D+ Sbjct: 120 INPYGFSKWAGEQVVRELLRRFYIVRVAW---LFGGERNFVRTVLRLAHERNEIAMVADE 176 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A A AI + LIE T G +H+ +G S +FA AER Sbjct: 177 IGSPTYAPDAAAAIAR----LIE---TPYYGTYHLVNEGS-CSRYEFAAATL-RLAERTD 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + I +Y + P Y+ L A+ IR+ W+E + Sbjct: 228 --VTLRPISLAEYQRASRVPPYTPLRNVAAADL-GIRLRPWEEAL 269 >gi|310780094|ref|YP_003968426.1| dTDP-4-dehydrorhamnose reductase [Ilyobacter polytropus DSM 2926] gi|309749417|gb|ADO84078.1| dTDP-4-dehydrorhamnose reductase [Ilyobacter polytropus DSM 2926] Length = 283 Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 13/288 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ + + VE I G ++D+ +F + D +IN AAY Sbjct: 3 LLTGGKGQLGSEFQKLFKKLGVEYIAPGHREMDITDINAVKNFLDGKNIDFVINCAAYND 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE EPE F++N +A + IG + S+D+VFDG + P E NP++ Sbjct: 63 VDRAEMEPENCFAVNCLAPENLALESKKIGAVFVTYSSDFVFDGEKKKPYTESDIVNPMS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +Y KSK GE++V + + ++RT+WV+ +NF+ +++ +++R +I +V DQ +P Sbjct: 123 VYSKSKAEGEKRVFTACDKIFVIRTSWVFGTGNNNFVKNVINWSQQRGKIELVEDQVSSP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +A + + LI NSD G++H++ G + + +YI E+ G + Sbjct: 183 TYAKDLA----EYSWKLI-NSDK--YGLYHLSNTGTASKYEE-GKYIL----EKIGWKGE 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + ++ T ++ A RP YS L K ++ WK + I Sbjct: 231 LLKVKTSKFNLPAKRPRYSKLSNQKAEKITGKKMPQWKNSIDRFFEEI 278 >gi|222099009|ref|YP_002533577.1| Putative dTDP-4-dehydrorhamnose reductase [Thermotoga neapolitana DSM 4359] gi|221571399|gb|ACM22211.1| Putative dTDP-4-dehydrorhamnose reductase [Thermotoga neapolitana DSM 4359] Length = 283 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 82/282 (29%), Positives = 146/282 (51%), Gaps = 15/282 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV-IINPA 58 M L+ G NGQ+ ++ + Q ++ I + ++D+ + F IIN A Sbjct: 1 MLVLITGANGQLGRAFQELFKEQGIDFIAATKEELDITNLQQIREFVRKNEGITHIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD+AE + + A+ +N G +A ++ IG ++ STDYVF G +P + + Sbjct: 61 AYNKVDEAERDWKTAYLVNGIGPKNLAIVSNEIGAELVHYSTDYVFSGKKGSPYTIYDTS 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P+N YG+SK+ GE V S++N Y ++RT+WV+ G NF+ +L +K+ + + +V D+ Sbjct: 121 DPINKYGESKVLGERFVMSFSNRYYLIRTSWVFGD-GMNFVRKVLEWSKKSKVLRIVDDE 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT A +A+A ++ G++H+T + G S ++AE+I E G Sbjct: 180 VSSPTYAPDLAKATWELIK-------LKAYGLYHIT-NSGYCSRYEWAEFILNEIGWDG- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++ R + + A RP +S LD L +++ +WK Sbjct: 231 ---ELKRAKQEDFNLPAKRPKFSVLDGFGLREFTGMKMESWK 269 >gi|182439721|ref|YP_001827440.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|62896327|emb|CAH94328.1| dTDP-L-rhamnose synthase StrL [Streptomyces griseus subsp. griseus] gi|178468237|dbj|BAG22757.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 304 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 132/268 (49%), Gaps = 8/268 (2%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + +GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTALGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL E+ + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEAEQDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALARETF---RLLGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++V + A RP YS LD S+ Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSR 269 >gi|17940025|gb|AAL49432.1|AF316500_19 RmlD [Leptospira interrogans] Length = 306 Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 19/291 (6%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+A L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLAWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE+ + + N I+RT+WVYS G+NF ++++L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELRV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FWE 232 + DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRDLAH 241 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S ++ I T+ YPT A RP YS LD + + + W+E + Sbjct: 242 SFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLEETRKIFGV-VPHWREDL 291 >gi|195953908|ref|YP_002122198.1| dTDP-4-dehydrorhamnose reductase [Hydrogenobaculum sp. Y04AAS1] gi|195933520|gb|ACG58220.1| dTDP-4-dehydrorhamnose reductase [Hydrogenobaculum sp. Y04AAS1] Length = 275 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 18/287 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G NGQ+ ++ + +Q+ + + + + D D+ F S+ PD+++N +AY Sbjct: 1 MKYLILGKNGQLGKAFLN-ALQNEDTLGLDKEDCDISDFDRLKEVFDSYRPDIVLNCSAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VDKAE + A+ NA G ++A I STDYVFDG E NP Sbjct: 60 NFVDKAETDFPNAYKTNAYGVKSLAYLCKQYNAYFITYSTDYVFDGKKEGLYKEEDMPNP 119 Query: 121 LNIYGKSKLAGE-EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YGKSKL GE + +Y+I RT+WVY NF+ +L AK + + D+F Sbjct: 120 INEYGKSKLTGEIWTLEEGLESYLIFRTSWVYGDGTQNFVYKLLNWAKNNDILKIAIDEF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADFAEYIFWESAERG 237 PT A + ++ D +L G++H+ +G WA ++ Sbjct: 180 SVPTPADFLVEKTLKAI-------DKNLSGLYHLVPNGYASRYEWAKLILKVY------- 225 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 G + + + + A RP +S LD SK+ N W + +R Sbjct: 226 GIKKIIIPVSKEVFNLPARRPDFSALDSSKIQKDLNENFEEWNDLLR 272 >gi|315502245|ref|YP_004081132.1| dtdp-4-dehydrorhamnose reductase [Micromonospora sp. L5] gi|315408864|gb|ADU06981.1| dTDP-4-dehydrorhamnose reductase [Micromonospora sp. L5] Length = 288 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 10/233 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + + L ++ D+ + GR D+D+ DV++N AA Sbjct: 3 RILVTGAGGMLGRDLLAVLRTRPDLSVTAAGRADLDVTDTHAVRDAVGGH--DVVLNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N + A+A A G +++STDYVF G + P E +PT Sbjct: 61 WTDVDGAETRERDATAVNGDAVAALAHACAGSGARLVHVSTDYVFGGDATEPYPEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P+N YG+SKLAGE VA YV+ RTAW+Y+ G NF+ +MLRLA ER + VV D Sbjct: 121 PVNAYGRSKLAGERAVARLLPETGYVV-RTAWLYATHGHNFVTTMLRLAAERDRLDVVDD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 Q G PT + + A ++ +A + G +H TA G +W A +F Sbjct: 180 QRGQPTWSYRFAERLVALADAALAGDAAP--GTYHGTA-AGETTWYGLARAVF 229 >gi|309812119|ref|ZP_07705877.1| dTDP-4-dehydrorhamnose reductase [Dermacoccus sp. Ellin185] gi|308433806|gb|EFP57680.1| dTDP-4-dehydrorhamnose reductase [Dermacoccus sp. Ellin185] Length = 289 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 95/261 (36%), Positives = 139/261 (53%), Gaps = 11/261 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G G + Q L ++ + V ++ +G D+ + PDV++N AA+TA Sbjct: 6 LVLGGTGMLGQDLVALLQRRGVTVVALGSAGCDITDRAEVERVVAEQGPDVVVNCAAHTA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E AF++NA GA +A+AA S +++STDYVFDG TP D P +P + Sbjct: 66 VDAAETEEAAAFALNATGAFNVARAARSAAAQLVHVSTDYVFDGRGTTPYDVDHPQDPRS 125 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++K AGE V + + +++RTAW+Y G NF+ +ML LA +R + VV DQ G P Sbjct: 126 AYGRTKAAGEWAVRATHPDALVVRTAWLYGAHGPNFVATMLTLAGKRETLDVVADQIGQP 185 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A II L+E G +H T+ G SW D A+ F + G + Sbjct: 186 TWTGDLAETII----GLVEQECPG--GFYHGTSS-GQGSWFDLAQEAFRLT---GLDPER 235 Query: 243 VYRIFTKQYPTKAHRPAYSCL 263 V ++ + A RPAYS L Sbjct: 236 VRPTTSEAFQRPAPRPAYSVL 256 >gi|310829176|ref|YP_003961533.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] gi|308740910|gb|ADO38570.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] Length = 288 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + + G GQ+ +L I D+D+ + PDVIIN AA Sbjct: 6 RIWITGAEGQLGHTLYKTLEDAARDILTTDKDVDVTDLDGIMQYADINRPDVIINCAAMA 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V E+EP A+ +NA GA ++ A+ IG I ISTD VF G+S+ EF P+ Sbjct: 66 DVKDCEEEPIQAYKVNALGARNLSIASRKIGAKIIQISTDDVFGGMSQKTYTEFDTPEPV 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGKSKLAGE V ++++R++W+Y GSNF+ +L +A++ V DQ G+ Sbjct: 126 TVYGKSKLAGEGFVRELNPRHLVIRSSWIYGQSGSNFVFWVLEMARKGEPFEVPNDQVGS 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PTSA+++A+ I+++ T G+FH + G S FA+ I + P Sbjct: 186 PTSAVELAKFIVRLL-------STREYGVFHAACE-GVCSRFYFAKEILRLAGLENVPID 237 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + ++ +P P+++ L+ + T ++ W++ +R + Sbjct: 238 AAVSKNTSRFFPY----PSHTVLENMMMYMTEVYQMPRWEDAIREFM 280 >gi|297194406|ref|ZP_06911804.1| dTDP-4-dehydrorhamnose reductase [Streptomyces pristinaespiralis ATCC 25486] gi|297152260|gb|EFH31623.1| dTDP-4-dehydrorhamnose reductase [Streptomyces pristinaespiralis ATCC 25486] Length = 298 Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 135/283 (47%), Gaps = 8/283 (2%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G G + ++ + + V + V R D+D+ P S P V++N AA Sbjct: 1 MSWLVTGAGGMLGLDVVARLAAEGVPAVPVARADLDITDPDAVRSCLADHRPAVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ A ++N G +A+A G ++ISTDYVF G + P E +PT Sbjct: 61 WTDVDGAEEREAAALAVNGTGTRNVAEACKESGAVLLHISTDYVFAGDATRPYAEDAPTA 120 Query: 120 PLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++KLAGE V ++R AW+Y G NF+ +M+RL R + VV DQ Sbjct: 121 PRSAYGRTKLAGERAVLELLPETGHVIRAAWLYGAGGPNFVRTMIRLEAARDTLDVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + +A ++++ + + T G+ H T+ G +W F IF G Sbjct: 181 RGQPTWSADLAGLLVRLGRAAV--AGTVPAGVHHGTSR-GETTWYGFTREIF---RLLGA 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V + + A RPAYS L T + W+E Sbjct: 235 DPDRVRPTDSAAFVRPAPRPAYSVLGHEGWRGTGIEPVRDWRE 277 >gi|257462295|ref|ZP_05626711.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] gi|317059964|ref|ZP_07924449.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] gi|313685640|gb|EFS22475.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] Length = 279 Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 141/285 (49%), Gaps = 13/285 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ + + ++ +E I + ++D+ F ++IN AAY Sbjct: 3 LITGAKGQLGMAFQRLFQREKIEYIATDKEELDITNEIILQDFVKGREISLLINCAAYNQ 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E +N E G +A A IG I S+D+VFDG +P E NPL+ Sbjct: 63 VDKAEAEREECEKLNREAPGKLAVLAKKIGADYITYSSDFVFDGEKNSPYTEEDIPNPLS 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+ K GE+ V N ++RT+W++ NF+ +L A ++E+ +V +Q Sbjct: 123 VYGRMKWEGEKAVFQEKENSFVIRTSWLFGKDRPNFIRQLLDWADIKQELFMVENQI--- 179 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 S+L A + + L + T G++H + + G S D A+YI + +G + Sbjct: 180 -SSLSYAEDLAYFSWKLFQ---TKQYGLYHFS-NSGESSKYDQAKYILEKIHWKG----R 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++R + +P +A RP YS LD SKL +I +W++ + L Sbjct: 231 LHRAKREDFPQEAKRPKYSKLDSSKLEKVIGEKIPSWEDSICRFL 275 >gi|297526884|ref|YP_003668908.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM 12710] gi|297255800|gb|ADI32009.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM 12710] Length = 284 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 20/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG +GQ+ + + D I + D+D+ PDVI+N AAY Sbjct: 1 MRVAVIGASGQLGSDIVFVLGDDA--IPLTHQDVDVTDASSL-DVIRDLKPDVIVNTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+ E P F++N+ GA +AK A+ + IYISTD+VFDG P +E NP Sbjct: 58 HKVDECELNPLKTFNVNSVGALNVAKIANEVDAINIYISTDFVFDGKKGRPYNEDDQPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y I+R A ++ + G+ NF+ + A+ I VV Sbjct: 118 VNVYGLSKYIGEIVTRNYSRKYYIIRLASLFGVKGARGKGGNFIDKITEKARRGEPIRVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +AR + ++ E G++HM + G SW + A+ +F E Sbjct: 178 DDMIMSPTYTKDVARMLKKLLELRPE------YGVYHMVNE-GYCSWYELAKTVF----E 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G + + I T+ A RP +S L+ +L + R+ W+E ++ LV Sbjct: 227 IIGWDADIKPIKTRDLNLVARRPLFSALENRRL-HKLGFRMRPWREALKEYLV 278 >gi|289549230|ref|YP_003474218.1| dTDP-4-dehydrorhamnose reductase [Thermocrinis albus DSM 14484] gi|289182847|gb|ADC90091.1| dTDP-4-dehydrorhamnose reductase [Thermocrinis albus DSM 14484] Length = 286 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 33/292 (11%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G GQ+ ++ + + + +++ +GR + D+ + P V+IN A Sbjct: 1 MRVLLLGKRGQLGRAFVKKLSSEGYQLVALGREECDVTSMSSVKRWLDEVKPHVVINCTA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE++ AF++NA + + + G+ I+ STDYVFDG P E + Sbjct: 61 YNYVDKAEEDYATAFAVNAFAVKVLGELCVAKGVKLIHYSTDYVFDGTKGAPYVEDDKPS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK GE + +++I R +WVY NFL +L K + + + D+ Sbjct: 121 PLSLYGKSKYTGELLLQELEGDFLIFRVSWVYGEGKQNFLYKLLNWVKTQDILKISADEV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTS + I+ + ++ LRG++H+T G +A EY Sbjct: 181 SVPTS----TKTIVDVTLKALKK---DLRGLYHLTNSG----YASRYEYA---------- 219 Query: 240 YSKVYRIFTKQ----------YPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 KV R+ + + A RP++S + ++++ I I W+E Sbjct: 220 -KKVLRLLKIEKTVLPVPMSVFSLPAKRPSFSAMSNARISKELQIDIPHWEE 270 >gi|108798290|ref|YP_638487.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS] gi|119867386|ref|YP_937338.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS] gi|108768709|gb|ABG07431.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS] gi|119693475|gb|ABL90548.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS] Length = 287 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 15/237 (6%) Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTP 111 N AAYT VD+AE EPE A ++NA G G +A +G I++STDYVF G S P Sbjct: 57 NCAAYTDVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERR 170 + PL++YG++KLAGE V + ++RTAWVY G++F+ +M R A Sbjct: 117 YEIDDAPAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGAD 176 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G+PTSA + A+++IA D +RG A+ G S D A +F Sbjct: 177 TVDVVADQIGSPTSAHDLVAALLEIA-------DGGVRGPLLHAANDGQASRFDQARAVF 229 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V + + + P A RPAYS L + A + W+E + + L Sbjct: 230 ETV---GADPERVRPVGSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSAL 283 >gi|302865681|ref|YP_003834318.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC 27029] gi|302568540|gb|ADL44742.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC 27029] Length = 288 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 121/233 (51%), Gaps = 10/233 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + + L ++ D+ + GR D+D+ DV++N AA Sbjct: 3 RILVTGAGGMLGRDLLAVLRTRPDLSVTAAGRADLDVTDAHAVRDAVGGH--DVVLNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N + A+A A G +++STDYVF G + P E +PT Sbjct: 61 WTDVDGAETRERDATAVNGDAVAALAHACAGSGARLVHVSTDYVFAGDATEPYPEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P+N YG+SKLAGE VA YV+ RTAW+Y+ G NF+ +MLRLA ER + VV D Sbjct: 121 PVNAYGRSKLAGERAVARLLPETGYVV-RTAWLYATHGHNFVTTMLRLAAERDRLDVVDD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 Q G PT + + A ++ +A + G +H TA G +W A +F Sbjct: 180 QRGQPTWSYRFAERLVALADAALAGDAAP--GTYHGTA-AGETTWYGLARAVF 229 >gi|312140708|ref|YP_004008044.1| dtdp-4-dehydrorhamnose reductase rmld [Rhodococcus equi 103S] gi|311890047|emb|CBH49365.1| putative dTDP-4-dehydrorhamnose reductase RmlD [Rhodococcus equi 103S] Length = 292 Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 145/294 (49%), Gaps = 18/294 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ L C + + + VG ++D+ S+ + V++N AA Sbjct: 9 RILVTGARGQLGGRLV-QCAEAAGLPVEGVGSAELDITDAGAVDSWVAPGA--VVVNCAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPIDEF 115 YTAVD AE + A ++N GA +A A G I++STDYVF G P + Sbjct: 66 YTAVDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPG 125 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT P YG++KLAGE + + + I+RTAWVY+ G++F+ +MLRL KE+ +SVV Sbjct: 126 DPTGPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYTGSGTDFVATMLRLEKEKDTVSVV 185 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT A+ +A ++++A T H T + G +W D A +F A Sbjct: 186 DDQVGSPTYAVDLAAGLLELARVGGRPGAT-----LHAT-NAGSATWFDLARAVF---AG 236 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + ++ A RPAYS L + W++ + + L Sbjct: 237 VGADPERVRPCTSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALAQ 290 >gi|167623451|ref|YP_001673745.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167353473|gb|ABZ76086.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 375 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 123/258 (47%), Gaps = 31/258 (12%) Query: 1 MKCLVIGNNGQIAQSLSSM---------------------------CVQDV-EIIRVGRP 32 M+ L+ G GQ+ Q+L S+ C+ E+I V Sbjct: 1 MRVLITGAAGQLGQALLSIAELTQVTAAELTAPQQMLVALLPEVLACIATTDEVIGVSHQ 60 Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +D+ + F +F PDV+IN AA+ VDKAE + + A ++NA G +A + Sbjct: 61 QLDICALHSIQAAFDAFKPDVVINCAAFNGVDKAETDTDKAIAVNATGPKLLAGECKRLN 120 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVY 151 I ++ISTD+VFDG + P E +PL+ YG+SKL GE V I+RT+W+Y Sbjct: 121 IRLVHISTDFVFDGALKRPYTEQDMPSPLSAYGRSKLEGERWVNDILGAKATIIRTSWLY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGI 210 S G NF+ +M L K R +SV+ DQ G+PT +A I + I + NSD + Sbjct: 181 SCCGQNFVKTMQGLFKTRERLSVINDQSGSPTWCETLALVIFKLIKQTQLANSDRKVAAQ 240 Query: 211 FHMTADGGPVSWADFAEY 228 H ADG A Y Sbjct: 241 NH-NADGTEKGLAHLYHY 257 >gi|326780385|ref|ZP_08239650.1| dTDP-4-dehydrorhamnose reductase [Streptomyces cf. griseus XylebKG-1] gi|326660718|gb|EGE45564.1| dTDP-4-dehydrorhamnose reductase [Streptomyces cf. griseus XylebKG-1] Length = 304 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTAFGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL E+ + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEAEQDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALARETF---RLLGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++V + A RP YS LD S+ Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSR 269 >gi|319789560|ref|YP_004151193.1| dTDP-4-dehydrorhamnose reductase [Thermovibrio ammonificans HB-1] gi|317114062|gb|ADU96552.1| dTDP-4-dehydrorhamnose reductase [Thermovibrio ammonificans HB-1] Length = 281 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 139/295 (47%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 MK LV+G +GQ+ A L + CV + + D+ K +F P VI+N Sbjct: 1 MKFLVLGASGQLGSEFALRLGNSCVA------LSSRECDVTNLKAVLEAVETFRPTVILN 54 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEF 115 AAY VD AE + AF +N G +A AA GI ++ STDYVF+G P E Sbjct: 55 CAAYNLVDSAESDFVSAFKVNGLGVRNVAHAASRFGIFVVHFSTDYVFNGKKEEGPYTEN 114 Query: 116 SPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P+N+YG+SKL GEE + + ++I R +W+Y NF+ +L A ER + V Sbjct: 115 DSPDPVNVYGRSKLFGEEFLREELPHRHLIFRVSWLYGRGRQNFVWKLLNWAGERPYLKV 174 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW--E 232 CD+F PTS R ++ ++ L G+FH+ G F W E Sbjct: 175 ACDEFSVPTS----TRTVVDYTLLALKK---GLTGLFHLVNTG-------FTSRFEWARE 220 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + G V + ++ A RP +S + +L+ ++ I W E +R+ L Sbjct: 221 ALKTLGLKKFVRPAYMAEFNLPAKRPGFSPMSNGRLSGELSVEIPHWLEELRSFL 275 >gi|289451157|gb|ADC94072.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Grippotyphosa] Length = 306 Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/291 (34%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE+ + + N I+RT+WVYS G+NF ++++L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELRV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FWE 232 + DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALTVRDLAH 241 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S ++ I T+ YPT A RP YS LD + + + W+E + Sbjct: 242 SFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLEETRKIFGV-VPHWREDL 291 >gi|303247232|ref|ZP_07333506.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] gi|302491391|gb|EFL51279.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] Length = 293 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 20/284 (7%) Query: 7 GNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + + L+ ++ ++ R ++D F + N AYTAVD Sbjct: 15 GKTGLLGRPLTKALADAGFAVLPTTRSELDPFDAAAVERALADFGATHLFNTVAYTAVDA 74 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AED+ A+ +N + +AK + + + STD+VF G + P E T P ++YG Sbjct: 75 AEDDVPGAYRLNRDLPALLAKCCRAAKVMLVQYSTDFVFSGDADAPYTEEDATGPRSVYG 134 Query: 126 KSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 SKLAGE+ + S Y ILRTAW++ NF+ +ML LAK+R E+ VV DQ G+PT Sbjct: 135 ASKLAGEKAILESGLLQYQILRTAWLFGPGKKNFVATMLNLAKDREELRVVGDQVGSPTY 194 Query: 185 ALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 + +A ++D +L+ GIFH G SW + A E+ G Sbjct: 195 TVDLAG----------WSADLALKNPVGIFHAVGTGHG-SWCELAA----EAVAAAGLSC 239 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V I + +YP KA+RP YS L +KLA W + VR Sbjct: 240 RVVSIPSSEYPQKAYRPRYSVLSNAKLAEAIGRVPRPWVQTVRE 283 >gi|289450994|gb|ADC93911.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Canicola] Length = 306 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 150/294 (51%), Gaps = 25/294 (8%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+A L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLAWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV------ILRTAWVYSIFGSNFLLSMLRLAKE--RRE 171 P IYG SK GE+ + N +V I+RT+WVYS +NF ++L+L ++ R E Sbjct: 125 PKGIYGLSKAEGEKWI---RNTFVDSKQANIVRTSWVYSSHSNNFPKTILKLLQDSNRHE 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI-- 229 + V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 182 LRVIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRD 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S ++ I T+ YPT A RP YS LD + + + W+E + Sbjct: 239 LAHSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLDETRKIFGV-VPHWREDL 291 >gi|297162853|gb|ADI12565.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces bingchenggensis BCW-1] Length = 302 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 12/286 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+ G + Q + + + E + +D+ P ++IN AA+ A Sbjct: 6 LVTGSGGLLGQDVMTGLREAGETAKGFDHKGLDITDAHAVRDALAKHRPAIVINCAAFAA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----DGLSRTPIDEFSPT 118 DKAE + E A IN EG +A A I+ISTDYVF G + P E +PT Sbjct: 66 PDKAETDEEGALRINGEGTRNLADACAEFQAHLIHISTDYVFSGDDSGGAAVPFAEDAPT 125 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P+N YG++K+AGE V A + RTAW++ +NF+ +M+RL +E+ + VV D Sbjct: 126 CPVNAYGRTKVAGERAVFACLPRTGYVFRTAWLFGAGRANFVRTMIRLEREKDHVDVVAD 185 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + A ++++ + + G +H +A GG SW + A+ +F G Sbjct: 186 QCGQPTWTMDAAGQLLRLGRAALGGQAPA--GAYHGSA-GGQASWYELAQEVF---RLLG 239 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V + A RPAYS L ++ I W+ G+ Sbjct: 240 ADPQRVRPSTGAAFGRPAPRPAYSVLGHARWHTVGIEPIRHWRAGL 285 >gi|88855653|ref|ZP_01130316.1| dTDP-4-dehydrorhamnose reductase [marine actinobacterium PHSC20C1] gi|88814977|gb|EAR24836.1| dTDP-4-dehydrorhamnose reductase [marine actinobacterium PHSC20C1] Length = 284 Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/284 (33%), Positives = 143/284 (50%), Gaps = 14/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + V+G G + L + D + + R ++D+ D A LS DV++N +AYT Sbjct: 3 RIAVVGAGGMLGTDLMR-ALSDHDATALTRNELDITD-ADAAVEVLS-GYDVLVNASAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + E A +NA G +A AA G + +STDYVFDG + P E +P +P+ Sbjct: 60 RVDDAESDEENAHLVNAVGPHNLALAAARHGSRLVQLSTDYVFDGTATEPYPEDAPRHPV 119 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K AGE + I+RTAW+Y GS+F +ML+LA +R + VV DQ G Sbjct: 120 SAYGRTKAAGELLALEHNPGRTAIVRTAWLYGKHGSSFPRTMLKLAADRDTLDVVNDQLG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I+ LI+ S GIFH T + G SW D A+ +F + G Sbjct: 180 QPTWTGDLAAQIVA----LIDAGTPS--GIFHGT-NAGRASWFDLAQAVFVCA---GLDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + A RP++S L + + WK+ ++ Sbjct: 230 DRVKPTDSSAFQRPAPRPSFSVLGHRAWLDAGIEPMRDWKQALQ 273 >gi|169630693|ref|YP_001704342.1| dTDP-rhamnose modification protein RmlD [Mycobacterium abscessus ATCC 19977] gi|169242660|emb|CAM63688.1| Possible DTDP-rhamnose modification protein RmlD [Mycobacterium abscessus] Length = 282 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 17/291 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G GQ+ L + ++D+ + + D D+ + D + D++IN AAYTA Sbjct: 3 VITGAGGQLGTHLIARAKLRDLPVRALTSSDWDITR--DGTPDGVVAEGDIVINCAAYTA 60 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPIDEFSPT 118 VD AE++ A+++NAEGA +A+A +G I+ISTDYVFDG P T Sbjct: 61 VDAAEEDESRAYAVNAEGAERVARACRDVGARLIHISTDYVFDGEFGDAGPRPYRPGDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +Y ++K+AGE V + ++RTAWVY+ +F+ M RLA + VV DQ Sbjct: 121 APQGVYARTKVAGELAVHGVLPSAQVVRTAWVYTGVNGDFVGVMRRLAAGEGPVRVVTDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A + +A L++ + + +R F A G V+ ++A+ +F G Sbjct: 181 TGSPTYA-------VDLAEALLDLAASDVREPFLHAAGSGHVNRFEWAKAVF---ELVGA 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 S++ + +P A RPAY+ LD A+ R+ W++ + L Sbjct: 231 DASRLQPCLSVDFPRPAPRPAYTALDGDHWADAGLPRLRPWRDALAEALAT 281 >gi|171912156|ref|ZP_02927626.1| dTDP-4-dehydrorhamnose reductase, RfbD [Verrucomicrobium spinosum DSM 4136] Length = 315 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 10/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++IG G++ +L + +++ V R D+DL + + S P V+I A T Sbjct: 29 KVVIIGAGGRLGSALVTKYAPKHDVVPVRRADLDLSQSDAIVPYLQSHHPSVVIYTAGTT 88 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD E+ PE + NAE +A+ G I+ISTDYVF G P E P+ Sbjct: 89 NVDLCEEHPEESLKTNAEAPARLAEYCKVHGARLIHISTDYVFSGNDPLPRKESDLAEPI 148 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+ KL GE+ V + + ++++R +W++ +F +L+ A E E+ + D+ Sbjct: 149 NVYGRHKLVGEQAVLNASPEFLVVRVSWLFGKDRPSFPDMILKRALENDEVFAIADKVSC 208 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT + +A I + SDT RGI H+ + G +W ++ + +A G P Sbjct: 209 PTFSDDLAEWIEPMI------SDTRYRGILHL-CNSGSCTWQEYGQKTLDIAASLGLPLR 261 Query: 241 -SKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V +P KA RP ++ D S+ W+E + + L Sbjct: 262 ATTVQGQSRVNFPAFKAARPEFTAFDISRYMELSGTTPRAWQEALEDYL 310 >gi|325675653|ref|ZP_08155337.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707] gi|325553624|gb|EGD23302.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707] Length = 297 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 144/294 (48%), Gaps = 18/294 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ L C + + + VG ++D+ S+ + V++N AA Sbjct: 14 RILVTGARGQLGGRLV-QCAETAGLPVEGVGSAELDITDAGAVDSWVAPGA--VVVNCAA 70 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPIDEF 115 YTAVD AE + A ++N GA +A A G I++STDYVF G P + Sbjct: 71 YTAVDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPG 130 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT P YG++KLAGE + + + I+RTAWVY+ G++F+ +MLRL KE+ +SVV Sbjct: 131 DPTGPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYTGSGTDFVATMLRLEKEKDTVSVV 190 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT A +A ++++A T H T + G +W D A +F A Sbjct: 191 DDQVGSPTYAADLAAGLLELARVGGRPGAT-----LHAT-NAGSATWFDLARAVF---AG 241 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + ++ A RPAYS L + W++ + + L Sbjct: 242 VGADPERVRPCTSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALAQ 295 >gi|319779307|ref|YP_004130220.1| dTDP-4-dehydrorhamnose reductase [Taylorella equigenitalis MCE9] gi|317109331|gb|ADU92077.1| dTDP-4-dehydrorhamnose reductase [Taylorella equigenitalis MCE9] Length = 309 Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 26/298 (8%) Query: 2 KCLVIGNNGQI------AQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 + ++IGN GQ+ ++SL S+C + I P + K S+ ++ PD++ Sbjct: 12 RAVIIGNTGQLGLSLKFSKSLYSICRYFNFFITSHIDPHENFRAVK---SYLTAYKPDLV 68 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AYT+VD AE++ I++ IN+ +A+ ++ STDYVFDG S P E Sbjct: 69 INTIAYTSVDAAEEDKLISYHINSVFPKILAEWCLKNDATLVHFSTDYVFDGRSNKPYKE 128 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR-----LAKER 169 NP+N YG KL E + TNN+ I RT+ +YS F NFL + AK Sbjct: 129 EDSPNPINQYGYDKLTAELYIEQMTNNFYIFRTSALYSPFRVNFLKKIFHKLSHPKAKGG 188 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +VV DQ PTS + + +I T GI+H+ SW +FA I Sbjct: 189 YSFNVVNDQITIPTSCDFLLEHMYKII-------STKANGIYHVVPSNY-CSWYEFARLI 240 Query: 230 FWESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E+ +G S + + + ++ + A RP +S LD SK+A I I +W E R Sbjct: 241 RSEAIRKGFLSSSAPMISPVKSTRFKSAAKRPLFSVLDNSKMAKALGIEIPSWDEIFR 298 >gi|134102912|ref|YP_001108573.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] gi|291008002|ref|ZP_06565975.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] gi|567875|gb|AAA68212.1| thymidine diphospho-4-keto-6-deoxyglucose 3, 5-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|133915535|emb|CAM05648.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] Length = 307 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 15/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPD------ 52 + LV G GQ+ L + + G ++D+ + A SF+ Sbjct: 6 LAVLVPGGRGQVGSELRRIVSGWSGALVHAPGSGELDVTDAEAVADAVDSFAETARDSDL 65 Query: 53 --VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 V++N AAYTAVD AE+EP+ + +IN GA A+A A G+P ++ISTDYVF G + Sbjct: 66 RPVVVNAAAYTAVDAAEEEPDRSAAINVAGAAALADACGRRGVPLLHISTDYVFPGDATR 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P + T P YG++KL GE V ++RTAWVY G NF+ +M RL ER Sbjct: 126 PYEPDDETGPRTSYGRTKLDGERAVLDSGARAWVVRTAWVYGAGGKNFVKTMARLESERD 185 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +SVV DQ G PT A +A ++++A + E R + H +GG SW +FA +F Sbjct: 186 TLSVVDDQVGCPTWAADLAAGLLELAGRVAERKGPEQR-VLHCV-NGGQSSWFEFARAVF 243 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE G +V ++++P A RPAYS L + + W+E Sbjct: 244 ---AELGADPERVRPCSSEEFPLPAPRPAYSVLSGRAWEASGLTPLRHWRE 291 >gi|126433957|ref|YP_001069648.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS] gi|126233757|gb|ABN97157.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS] Length = 287 Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 15/237 (6%) Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTP 111 N AA+T VD+AE EPE A ++NA G G +A +G I++STDYVF G S P Sbjct: 57 NCAAFTDVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERR 170 + PL++YG++KLAGE V + ++RTAWVY G++F+ +M R A Sbjct: 117 YEIDDAPAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGAD 176 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G+PTSA + A+++IA D +RG A+ G S D A +F Sbjct: 177 TVDVVADQIGSPTSAHDLVAALLEIA-------DGGVRGPLLHAANDGQASRFDQARAVF 229 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V + + + P A RPAYS L + A + W+E + + L Sbjct: 230 ETV---GADPERVRPVGSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSAL 283 >gi|267041|sp|P29781|RMLD_STRGR RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|49013|emb|CAA44443.1| dTDP-dihydrostreptose synthase [Streptomyces griseus] Length = 304 Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + +GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTALGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL + + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEADEDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALAPETF---RLLGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++V + A RP YS LD S+ Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSR 269 >gi|111220689|ref|YP_711483.1| dTDP-4-dehydrorhamnose reductase [Frankia alni ACN14a] gi|111148221|emb|CAJ59891.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Frankia alni ACN14a] Length = 302 Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 25/249 (10%) Query: 1 MKCLVIGNNGQIAQSLSSM----CVQDVEIIR----VGRPDIDLLKP-------KDFASF 45 M+ LV G GQ+ L + + +R +GR ++D+ P +D A Sbjct: 1 MRVLVTGAAGQLGADLCRLLEARTAEPDSPVRAWAGLGRAELDITDPARVRAVLRDQARP 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 V+IN AA+T VD AE + A+++NA G +A + + +STDYVFD Sbjct: 61 AKIQGGLVVINTAAWTDVDGAEADEAGAYAVNATGPAHLAATCAELDATLVQLSTDYVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSML 163 G + P + T+P YG++KLAGEE V + ++YV+ RTAWVY G NF+ ++ Sbjct: 121 GRATKPYETGDETDPAGAYGRTKLAGEEAVRALLPASSYVV-RTAWVYGATGRNFVKTIS 179 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 RLA+ER +SVV DQ G+PT + +A ++ + + + G++H T + G +W Sbjct: 180 RLARERGAVSVVADQTGSPTWSADLAAGLLDLV------ASPAPPGVYHCT-NTGETTWY 232 Query: 224 DFAEYIFWE 232 FA I E Sbjct: 233 GFARRIMTE 241 >gi|225010350|ref|ZP_03700822.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] gi|225005829|gb|EEG43779.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] Length = 314 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 107/314 (34%), Positives = 160/314 (50%), Gaps = 44/314 (14%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIR------VGRPDIDLLKPKDFAS----FFLSFSP 51 LV G +GQ+ QSL + ++ + + R +DL + + +S +P Sbjct: 10 VLVSGASGQVGQSLRHVLDTEETPLFSKNSWGFLDRSSLDLSQSDNLSSVIEGLLDKHAP 69 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--R 109 ++ AA+TAVD AE + E AF+IN +A A I +Y+STD+VF G S + Sbjct: 70 KAFVHAAAFTAVDAAETQKEAAFTINETATRILAAACAKRNILFVYLSTDFVFAGKSTDQ 129 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P P +P+ +Y +SK AGE+ V + + I+RT+WV+S FG+NF+ +MLRLAKER Sbjct: 130 KPFLPSDPIHPIGVYAQSKAAGEKAVQLHGGPHYIVRTSWVFSPFGNNFVKTMLRLAKER 189 Query: 170 RE----------------ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + ISVV DQFG PTSAL +ARA++ + + GI H Sbjct: 190 LQFLSEPNQQTSARVKPTISVVSDQFGCPTSALDLARALLALI-----TVQSLPYGILHF 244 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 + + GPV WA A +F E+ V I ++ + A RPAYS L+ NT + Sbjct: 245 S-NAGPVHWAQLAGAVF----EQSNLPITVKPISSEDFAAAAPRPAYSVLE-----NTLD 294 Query: 274 IRISTWKEGVRNIL 287 + WKE + +L Sbjct: 295 PKARHWKEALAEVL 308 >gi|154488287|ref|ZP_02029404.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis L2-32] gi|154083438|gb|EDN82483.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis L2-32] Length = 483 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 34/300 (11%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ S ++ E + D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVESHGLEGFEFNDIDT--FDFSDPAQYDQFDWSLY-GTIINA 248 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AYTAVDKAE PE +A+ NA+G +A+ A I +++S+DYVFDG +R DE Sbjct: 249 GAYTAVDKAE-TPEGRALAWKANAQGPALLARVAREHNITLVHVSSDYVFDG-TREMHDE 306 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML----RLAK-ER 169 PL +YG+SK AG+ V++ +Y ILR++WV G NF+ +M+ R+AK E Sbjct: 307 SEGFAPLGVYGQSKAAGDIAVSNAPRHY-ILRSSWVIGE-GHNFVKTMMGLSGRVAKGEL 364 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +++VV DQ+G T +A AI + +SD + G + +T G SWAD A + Sbjct: 365 GKVTVVDDQYGRLTFTRDMAEAIFHLL-----DSDAAY-GTYDLTGSGSVRSWADIARMV 418 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVR 284 F + GG KV I T +Y A RP YS L+ +K+ T +++ W+E ++ Sbjct: 419 FDLANGNGG---KVEPISTAEYFANAKNPVSPRPTYSALNLAKIEAT-GLKVPDWEESLK 474 >gi|309791917|ref|ZP_07686399.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] gi|308226035|gb|EFO79781.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] Length = 328 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 144/294 (48%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ ++ G GQ+ +L+ + E+ V R DI+L P+ ++ S D+II+PAAY Sbjct: 50 VRIVITGAQGQLGSTLARILADGHELTLVDRDDIELSSPEAIDQL-VATSADMIIHPAAY 108 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +PE A+ +NA G +A A +G P IYIST+ VF G + E+ T P Sbjct: 109 TDVDGCARDPEWAYRVNALGTKYVAMACRRLGSPMIYISTNEVFAGDAGRAYMEYDQTGP 168 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERRE--ISVVC 176 +N YG+SKLAGE V ++ I+R AW +FG NF+ ++LRLA + +V Sbjct: 169 INAYGRSKLAGEVAVREILRDFYIVRIAW---LFGGERNFVRTVLRLAANPPSGGLRMVD 225 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D+ G PT +A AI+++ T G +H+ G +A FA I ++ Sbjct: 226 DEIGNPTYCPDLAAAIVRLIA-------TGAYGTYHLVNSGACSRYA-FASEILRQAGHH 277 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I Y + P YS L + A I + W+E + L + Sbjct: 278 D---LRITPIRLADYQRASTPPPYSPL-LNIAAADLGITLRPWQEALAEYLTTL 327 >gi|227889830|ref|ZP_04007635.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii ATCC 33200] gi|227849694|gb|EEJ59780.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii ATCC 33200] Length = 213 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 28/210 (13%) Query: 95 CIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +Y+STDYVFDG TP + +F PLN+YG++KL GEE VA+ + Y I+R AWV+ + Sbjct: 1 MVYLSTDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGV 60 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 GSNF+ +ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H Sbjct: 61 NGSNFIKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLV----DMIE---TDKYGYYHA 113 Query: 214 T------ADG---------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHR 257 T ++G G +SW DF + I+ + G +KV + T++Y +KA R Sbjct: 114 TNAELPASEGNHDENGTKTGYISWYDFTKEIY----RQAGYKTKVTPVTTEEYGLSKAVR 169 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S LD SKL + TW + + L Sbjct: 170 PFNSRLDKSKLEENGFKPLPTWPDAISRYL 199 >gi|237786087|ref|YP_002906792.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium kroppenstedtii DSM 44385] gi|237758999|gb|ACR18249.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium kroppenstedtii DSM 44385] Length = 315 Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 150/304 (49%), Gaps = 46/304 (15%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAK 86 +GR ++D+ S PD+IIN AAYTAVD+AED + A ++N +GA +A+ Sbjct: 15 LGRAELDITDQDVIHDVLDSEQPDLIINAAAYTAVDRAEDPAHQDAARAVNTDGAAYLAQ 74 Query: 87 AADSIGIPCIYISTDYVF--------DG---------------LSRTPIDEFSPTNPLNI 123 AA IP I+ISTDYV+ DG P+ +PT+ ++ Sbjct: 75 AAAQAEIPFIHISTDYVYGQRDAVESDGGGEPANPTDASEPFVGGHAPLRVDTPTHAQSV 134 Query: 124 YGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG----SNFLLSMLRLAKERR----- 170 YG++KLAG+ V + N VI+RTAWVYS +F+ +M+RL ++ R Sbjct: 135 YGRTKLAGDRAVQAAFENTDVPCVIVRTAWVYSGLALPDHHDFVSTMMRLEQQSRGDDSP 194 Query: 171 EISVVCDQFGTPTSALQIARAIIQI--AHNLIENSDTSLR--GIFHMTADGGPVSWADFA 226 + VV DQ+G+PT+ +AR + ++ A + N L + H T G +W D A Sbjct: 195 HVRVVNDQWGSPTNVFDLARGLWELSGASSATINFPAILAPGSVVHCTGTGA-CTWWDVA 253 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +F AE G +V I ++ YPT A RP +S LD S + W++GV Sbjct: 254 RQVF---AEVGADPDRVIPISSEDYPTAAARPHWSVLDNSSWLALGLTPLPAWEDGVHRA 310 Query: 287 LVNI 290 + + Sbjct: 311 VTGV 314 >gi|289451237|gb|ADC94151.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Hebdomadis] Length = 306 Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 149/294 (50%), Gaps = 25/294 (8%) Query: 7 GNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G NGQ+ L+ + +E + GR + DL D A+ L SP ++++ AYTAVDK Sbjct: 6 GKNGQLGWELAERFKSNGLEAVGFGREEWDLAD-LDSAARILKDSPRILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E A+ IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSILS 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYV------ILRTAWVYSIFGSNFLLSMLRLAKE--RRE 171 P IYG SK GE+ + N +V I+RT+WVYS +NF ++L+L ++ R E Sbjct: 125 PKGIYGLSKAEGEKWI---RNTFVDSKQANIVRTSWVYSSHSNNFPKTILKLLQDSNRHE 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI-- 229 + V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 182 LRVIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRD 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 S ++ I T+ YPT A RP YS LD + + + W+E + Sbjct: 239 LAHSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLDETRKIFGV-VPHWREDL 291 >gi|159037627|ref|YP_001536880.1| dTDP-4-dehydrorhamnose reductase [Salinispora arenicola CNS-205] gi|157916462|gb|ABV97889.1| dTDP-4-dehydrorhamnose reductase [Salinispora arenicola CNS-205] Length = 297 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 12/291 (4%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G G + + ++ + + R ++D+ P+ + F ++ P V++N A +TA Sbjct: 10 LVTGAGGMLGREVIAELGRAGLSAAGTDRHELDVTDPERVRTAFRAYRPAVVVNCAGWTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE++ A ++N G +A+ G + +STDYVFDG +P E +P P + Sbjct: 70 VDAAEEQEAAAHAVNGRGPELLAEECRRSGAVLLQLSTDYVFDGRGSSPYAEDAPVAPRS 129 Query: 123 IYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KLAGE V ++RTAW+Y G NF+ S++R + R + +V DQ G Sbjct: 130 AYGRTKLAGEAAVLHGLPETGYVIRTAWLYGAGGPNFVHSIIRAERSRATVDIVDDQCGQ 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A ++++ D GI+H T GG +W +F IF A G + Sbjct: 190 PTWARDLAAHLVRLG-GAARRGDAPA-GIYHGTG-GGDTTWYEFGRQIF---AALGADPA 243 Query: 242 KVYRIFTKQYPTKAHRPAYSCL--DCSKLANTHNIRISTWKEGVRNILVNI 290 +V +++ +A RPAYS L D +LA +R +W+ R + Sbjct: 244 RVRPTSSERLAWRAPRPAYSVLGHDRWRLAGMAPLR--SWRTAFREAFDEV 292 >gi|326772073|ref|ZP_08231358.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces viscosus C505] gi|326638206|gb|EGE39107.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces viscosus C505] Length = 341 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 98/280 (35%), Positives = 153/280 (54%), Gaps = 24/280 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ LV G NGQ+ ++L ++ Q E V P++D+ +S+ S D+IIN AA Sbjct: 58 VRVLVTGANGQLGRALMTLLPQAGFEPTGVDLPEVDISDAAAMSSWDWS-GYDIIINAAA 116 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG + +E + Sbjct: 117 WTNVDGAET-PEGRRLSWRANTVGPVNLARAAVRHGLTLVHLSTEYTFDGATALHTEEET 175 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P+ PL +YG+SK AG+ V+ +Y++ RT+WV G NF+ +ML LA+ SVV Sbjct: 176 PS-PLGVYGQSKAAGDAAVSVCPQHYLV-RTSWVVG-DGKNFVKTMLSLAERGITPSVVA 232 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T A +A II H L ++ G ++++ DG VSWAD A+ ++ ER Sbjct: 233 DQTGRLTFASDLAAGII---HLLTAGAEF---GTYNLSGDGPIVSWADVAKRVY----ER 282 Query: 237 GGPY-SKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 G +V + T++Y A RP S LD +K+ T Sbjct: 283 AGHSPDEVTAVTTEEYYAGQEGIAPRPLSSALDLAKIKAT 322 >gi|295691453|ref|YP_003595146.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] gi|295433356|gb|ADG12528.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] Length = 289 Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 21/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G NGQ+ +S++ Q ++++ V R +D P F + DV IN A Sbjct: 5 RIALFGANGQLGSDISTLAAQRGLDLVPVTRAQLDASDPT---PSFDGLAFDVAINCVAV 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 T VD E +P A +INA AG +A+A + G + +STDYV+ G + R P+ E Sbjct: 62 TRVDDCEKDPAPAVAINAHFAGRLARACAARGARLVQVSTDYVYGGQAQREPLSEEIGRA 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERREISV 174 P+N+YG +K GE+ ++ ++ R A ++ + G+ NF+ +MLRL +ER ++V Sbjct: 122 PVNVYGATKALGEDLARLEHDDVIVARVASLFGVAGASGKGGNFVETMLRLGQERGRLTV 181 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ +PT + AI+ +LI + G +H+ + G SW DFA I Sbjct: 182 VADQMMSPTGSWDAGEAIL----DLIAAEAPA--GDYHVV-NSGAASWWDFAARII---- 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ER G ++V I T +PT A RP YS L +KL+ W + + L Sbjct: 231 ERAGIAAEVAPIPTSDFPTPARRPPYSALSNAKLSTAIGRSTPHWTDALDRYL 283 >gi|157961263|ref|YP_001501297.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] gi|157846263|gb|ABV86762.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] Length = 363 Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 43/267 (16%) Query: 1 MKCLVIGNNGQIAQSLSSM---------------------------CVQDV-EIIRVGRP 32 M+ L+ G GQ+ Q+L S+ C++ E+I V Sbjct: 1 MRILITGAAGQLGQALLSIAGLTQVNLAERTVAQQMLVALLPEALECIETTDEVIGVSHQ 60 Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +D+ F + +PDV+IN AAY AVDKAE + + A INAEG +A Sbjct: 61 ALDICDIDSIRKAFDTIAPDVVINCAAYNAVDKAEFDIDKAMLINAEGPKLLAGECQRHN 120 Query: 93 IPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWV 150 I ++ISTD+VFDG L R ++ SP PL++YGKSKL GE V+ + I+RT+W+ Sbjct: 121 IRLVHISTDFVFDGELLRAYTEQDSPA-PLSVYGKSKLEGERWVSDILGSKATIIRTSWL 179 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPT--SALQIA--------RAIIQIAHNLI 200 YS +G NF+ +M L K + +SV+ DQ+G+PT AL +A +A I ++ Sbjct: 180 YSCYGHNFVKTMQSLFKVKESLSVINDQYGSPTWCEALAVAIFMLVKQTQATILTRPSVC 239 Query: 201 ENSDTS-LRGIFHMTADGGPVSWADFA 226 E+ L ++H A SW +FA Sbjct: 240 EDKPAKGLADLYHYAASAS-ASWYEFA 265 >gi|315445634|ref|YP_004078513.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|315263937|gb|ADU00679.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 451 Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 16/260 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK-DFASFFLSFSPDVIINPAAY 60 + LV+G +GQ+ ++L Q + R DIDL D A + + D IIN AAY Sbjct: 192 RILVLGASGQLGRALRQEYAQASHVEFAARTDIDLTTTNLDSARRWRDY--DAIINAAAY 249 Query: 61 TAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 T VD +E A++ N G A+A+ A + G+ +++S+DYVFDG + P E P Sbjct: 250 TGVDASETAAGRLAAWATNVTGVAALARVAAAHGVTLVHVSSDYVFDGTAGRPYREDDPV 309 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG++K AG+ V + +Y+I RT+WV G+NF+ +ML LA + SVV DQ Sbjct: 310 CPLGVYGETKAAGDLIVTTVPRHYII-RTSWVVGD-GNNFVQTMLSLAGRGIDPSVVADQ 367 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G T A +IARAI + IE + + G +++T G SWA+ +F A G Sbjct: 368 YGRLTFASEIARAI----RHCIETN--APYGTYNVTCSGPISSWAEIGRQVF---ALAGH 418 Query: 239 PYSKVYRIFTKQYPTKAHRP 258 +V R+ T +Y A RP Sbjct: 419 NPDRVTRVSTAEYFADATRP 438 >gi|87307564|ref|ZP_01089708.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] gi|87289734|gb|EAQ81624.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] Length = 289 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/292 (31%), Positives = 142/292 (48%), Gaps = 24/292 (8%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G+ GQ+ L+ +++ R I+L P ++IN AAYTAVD Sbjct: 7 ITGSAGQLGSELARQL--GSRAVQLSRAHINLASDASILDALGEIRPAILINCAAYTAVD 64 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRTPIDEFSP 117 KAE + E F NAE + I + +STDYVFD S+ P+DE +P Sbjct: 65 KAESDAEACFRANAEAVATMTGYCRERNIRLVQLSTDYVFDDYAADNAAGSQRPLDEQTP 124 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERREISVV 175 +P IY +SKL GE A+ N +I+RT +Y + NF+ +M+RLA E+ VV Sbjct: 125 ASPRGIYAQSKLQGEIAAAATPEN-LIVRTCGLYGGGPTMRNFVETMIRLAATNPELRVV 183 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ TP+ + +A A+++ LIE T G++H+T + +W + A+ +F + + Sbjct: 184 DDQRCTPSYCVDVAAAVLR----LIEQEAT---GLYHVT-NRESTTWFELAQTLFSLTRK 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I T +Y A RPAYS L K + + +W+ + L Sbjct: 236 P----TVVQPISTAEYGAAAPRPAYSVLSLEKYSACVQREMPSWRNALERYL 283 >gi|307296820|ref|ZP_07576638.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] gi|306877733|gb|EFN08959.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] Length = 727 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/262 (30%), Positives = 132/262 (50%), Gaps = 13/262 (4%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G G + Q++ C ++++ + R D+DL P A +P ++N A + Sbjct: 446 LICGATGTLGQAMVRACALRNIPFLLTSRRDLDLSAPSRMAERIEHIAPWAVVNAAGWVR 505 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE P+ ++NA+GA A+A+ GIP + S+D VFDG P E PT+PLN Sbjct: 506 VDEAEAAPDPCMTVNAQGAIALARVCQDRGIPTLSFSSDLVFDGQQDRPYVEDDPTSPLN 565 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGT 181 YG SK E+ + + ++I+RTA +S NF ++R + D T Sbjct: 566 RYGLSKAEMEQGIGALAGRHLIVRTAAFFSPHDEFNFAADVVRSLAQGGHFVAADDLVVT 625 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT ++ A +L+ + + G++H+T+ G P+SWADFA I +A G + Sbjct: 626 PTYVPH----LVATALDLLIDGEV---GLWHLTS-GTPLSWADFARRI---AARCGHDPA 674 Query: 242 KVYRIFTKQYPTKAHRPAYSCL 263 +V + + A RPAY+ L Sbjct: 675 RVRAVPHRSLGWAAERPAYAAL 696 >gi|23464835|ref|NP_695438.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] gi|23325419|gb|AAN24074.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] Length = 480 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 150/298 (50%), Gaps = 30/298 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ +++ + +E D D P + F S +IN A Sbjct: 189 RTMVTGCNGQLGRAIRAYVDAHGLEGFEFHDIDTFDFSDPAQYDRFDWSLY-GTVINAGA 247 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVDKAE PE +A+ NA+G +AK A I +++S+DYVFDG + DE Sbjct: 248 YTAVDKAE-TPEGRVLAWKANAQGPALLAKVAREHNITLVHVSSDYVFDGTAELH-DEEE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML----RLAK-ERRE 171 PL +YG+SK AG+ VA+ +Y ILR++WV G NF+ +M+ R+AK E E Sbjct: 306 AFAPLGVYGQSKAAGDIAVANCPRHY-ILRSSWVIGE-GHNFVKTMMGLSDRVAKGELPE 363 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++VV DQ+G T +A AI + + G + +T G SWAD A +F Sbjct: 364 VTVVDDQYGRLTFTKDMAEAIFHLFDG------GAAYGTYDLTGSGTVKSWADIARTVFD 417 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVR 284 + GG KV I T +Y A RP YS LD +K+ T + + W+E ++ Sbjct: 418 LTNGNGG---KVKPISTAEYFANAKAPVSPRPTYSALDLAKIEAT-GLDVPDWEESLK 471 >gi|183981297|ref|YP_001849588.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium marinum M] gi|183174623|gb|ACC39733.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium marinum M] Length = 308 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 142/296 (47%), Gaps = 36/296 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD--------FASFFLSFSPDV 53 + ++ G GQ+ L++ V R GR D+L A+ + + DV Sbjct: 7 RLVITGAAGQLGGVLAAQAV------RAGR---DVLAKTSSEWDITDAAATEEIIGTGDV 57 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF--------D 105 +IN AAYT VD AE + A+++NA G +AKA G I++STDYVF D Sbjct: 58 VINCAAYTDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADLPD 117 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLR 164 G P + T P +Y +SK AGE V + + V++R+AWVY+ GS+F+ M R Sbjct: 118 GAQPQPYEPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIMRR 177 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LA + VV DQ G+PT +A A++++A D +RG A+GG VS Sbjct: 178 LAAGEGPVDVVDDQTGSPTYVADLAAALLEVA-------DAGVRGRLLHAANGGAVSRFG 230 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 A +F E G +V + T Q+P A RP YS L + A + W+ Sbjct: 231 LARAVFEEC---GTDPQRVRPVSTAQFPRPAVRPGYSALGGRQWAAAGLTPLRPWR 283 >gi|283458590|ref|YP_003363223.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18] gi|283134638|dbj|BAI65403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18] Length = 474 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/277 (35%), Positives = 148/277 (53%), Gaps = 26/277 (9%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG GQ+ L + Q+V + V R +DL KP+ + F S +IN AAYTA Sbjct: 189 LIIGAGGQLGTELVRQLTEQNVPFLAVDRDRLDLGKPEQWRDAFRWRSFRAVINAAAYTA 248 Query: 63 VDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 VD+AE PE A++ NA G A+A + +P +++STDYVFDG P+ E P + Sbjct: 249 VDQAE-TPEGRCDAWAANALGVSALASICEEANLPLVHVSTDYVFDG--SLPLGEEYPED 305 Query: 120 ----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL++YG SK AGE A++ +Y LRT+WV G NF+ +M LA+ + SVV Sbjct: 306 YPLAPLSVYGASKAAGEVAAAAWRKHYT-LRTSWVVGA-GKNFVGTMASLAERGIDPSVV 363 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT +A A + + ++ E G ++++ G ++WA FA ++ Sbjct: 364 ADQWGRPTFTQDLAAAALHLLFSVAE------YGTYNVSNTGEVINWAQFARAVY---EG 414 Query: 236 RGGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKL 268 G ++V T++Y AHRP S +D SKL Sbjct: 415 TGHDPARVSDTTTEEYFANAELFAHRPTNSAMDLSKL 451 >gi|3399703|dbj|BAA32088.1| dTDP-4-keto-L-rhamonose reductase [Streptococcus mutans] Length = 219 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 114/227 (50%), Gaps = 21/227 (9%) Query: 66 AEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF----SPTNP 120 AEDE E+ ++IN G IAKA + +YISTDYVFDG P+ + +P Sbjct: 1 AEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDG--EKPVGQEWEVDDKPDP 58 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ G Sbjct: 59 KTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVNDQHG 118 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGP 239 PT +A + +A N E G +H++ D +W DFA I ++ P Sbjct: 119 RPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVVVKP 172 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + Q+P KA RP S + +K A I TW+E ++ Sbjct: 173 ------VDSSQFPAKAKRPLNSTMSLTK-AKATGFVIPTWQEALQEF 212 >gi|296329268|ref|ZP_06871769.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153624|gb|EFG94441.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 307 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 146/299 (48%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-------RT 110 AAY VDKAE E E+ + NAE +A A IG I STD+VF+G++ T Sbjct: 62 AAYNDVDKAETEKELCYKANAEAPANLAMVASEIGATYITYSTDFVFNGMTTNYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T+ I+RT+WV+ G NF+ ++ Sbjct: 122 GYTEEDEAHPLSAYAKAKYEGELLVSQIIENPENTSKIYIVRTSWVFGEGGMNFVEKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L+KE+ E+ VV DQ +PT + +A ++ E+ G++H+T D G VS + Sbjct: 182 LSKEKDELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GVYHLTND-GIVSKYE 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ + Sbjct: 235 EAQYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|240172502|ref|ZP_04751161.1| putative dTDP-rhamnose modification protein [Mycobacterium kansasii ATCC 12478] Length = 304 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 82/234 (35%), Positives = 123/234 (52%), Gaps = 15/234 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV----FDGL 107 DV++N AAYT VD AE + A+++NA G +A+A +G I++STDYV F+G Sbjct: 53 DVVLNCAAYTDVDAAESDEARAYAVNASGPEHLARACARVGARLIHVSTDYVFNGDFNGA 112 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLA 166 P + T P ++Y +SKLAGE+ V + V++RTAWVY+ G++F+ M RLA Sbjct: 113 QPHPYEPGDATAPQSVYARSKLAGEQAVLAALPQAVVVRTAWVYTGGDGTDFVAVMRRLA 172 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 I VV DQ G+PT +A A++++A + G+ H A+ G VS A Sbjct: 173 AGDGPIDVVSDQTGSPTYVADLAAALLEVAGAGVPG------GVLH-AANEGAVSRFAQA 225 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +F E G +V + + Q+P A RP+YS L A + W+ Sbjct: 226 CAVFEEC---GADPRRVRPVSSAQFPRPAPRPSYSALGGRAWAAAGLTPLRPWR 276 >gi|7329196|gb|AAF59936.1| 4-ketoreductase [Streptomyces antibioticus] Length = 294 Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G + + L ++ E + +G +D+ +P + P +++N AA Sbjct: 1 MRWLITGAAGMLGRELVRRLAENEEDVAALGHDHLDVTRPFAVRAALAEHRPGIVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + A +NAE +A+A G +++STDYVF G +RTP E PT Sbjct: 61 YTAVDDAETDEAAAALLNAEAPRLLAEACAPHGARLVHLSTDYVFPGDARTPYAEDHPTA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++K GE+ V + +LRTAW+Y G +F+ +M+ I VV DQ Sbjct: 121 PRSAYGRTKRDGEQAVLTALPTATVLRTAWLYGRTGRSFVRTMIEREARGGAIDVVADQC 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF-WESAERGG 238 G PT +A II + + + GI H T + G +W D A+ +F A+ G Sbjct: 181 GQPTWTGDLADRIIAVGRH------PGVHGILHAT-NAGSATWYDLAQEVFRLLDADPGR 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 F + P RPAYS L + T + W+ +R +I Sbjct: 234 VRPTTGAAFRRPAP----RPAYSVLGHDRWRGTGLAPLRDWRSALREAFPDI 281 >gi|291523077|emb|CBK81370.1| dTDP-4-dehydrorhamnose reductase [Coprococcus catus GD/7] Length = 282 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 7/216 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +IG G++ ++S + + D+D+ +F P V+IN A Y Sbjct: 5 KVWIIGAKGRLGSTISDALDRMAYNVLTSDMDVDITDMDSVTAFMDMSHPAVVINCAGYN 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + E++ AF +NA GA +A A+ +G I++STD VFDG P++EF P Sbjct: 65 THNWLEEDMVKAFRVNAIGARNVASASRKVGAKLIHMSTDDVFDGQGNEPLNEFDTATPD 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 I+GKSKLAGE V ++I+R++WVY+ GS F+ S++R AKE I V +Q+ + Sbjct: 125 TIFGKSKLAGENFVRELNPKHLIVRSSWVYAKEGSCFVNSVIRQAKEGGVIQVAAEQYSS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 PTSA +A ++++ D + GI+H + +G Sbjct: 185 PTSAKVLADFVMKMI-------DANEYGIYHASCEG 213 >gi|170743903|ref|YP_001772558.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] gi|168198177|gb|ACA20124.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] Length = 297 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 103/285 (36%), Positives = 142/285 (49%), Gaps = 3/285 (1%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ +L V + R +D+ A+ + +IN AAYTA Sbjct: 5 LILGGGGQVGTALRHAAWPAGVALHAPSREALDVTDEAAVAAALAERAYAAVINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE E A+ +NA +A A GIP + +STDYVFDG +P NP + Sbjct: 65 VDRAESEVAAAWRLNALAPAILAAATARAGIPLVQVSTDYVFDGSLAGAYPTDAPVNPAS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK GE V + + ++RTAWV S +NF+ +MLRLA ER + VV DQ G P Sbjct: 125 VYGASKAGGEMAVRTANPRHAVVRTAWVVSPHRANFVKTMLRLAGERDALRVVDDQRGCP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 TSA +A A+ IA L E D + G + + G +W FA I + RG Sbjct: 185 TSADDLAAALAAIALRLAE--DPAAPGGTYHCVNAGATTWCGFARAIMAGARARGARAVP 242 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T YPT A RPA S L + L+ I W+ + +IL Sbjct: 243 VEPIATSSYPTPARRPANSELSTATLSRDFGIVPRPWEAALADIL 287 >gi|213964836|ref|ZP_03393035.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium amycolatum SK46] gi|213952372|gb|EEB63755.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium amycolatum SK46] Length = 324 Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 29/306 (9%) Query: 5 VIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G GQ+ +L DVE+ + R +D+ + L D+II+ AA T V Sbjct: 26 ITGAAGQLGTALQRDSFAADVEVRALTRAQLDITDSAAVEATPLLDDVDIIISAAAATDV 85 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP------ 117 D AE +P A INA G +A A I+ISTDYVF ++ IDE + Sbjct: 86 DGAESDPGSAHLINALGPKYLAARAKKEDAYLIHISTDYVFGDVA---IDEMTGQRRALR 142 Query: 118 ----TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 T P +YG++KL GE V + ILRTAWV+S +F+ +M+RLA+ Sbjct: 143 VDDFTAPQTMYGRTKLVGENNVRDSGARFAILRTAWVWSGPTQPEAKDFVSTMMRLAETA 202 Query: 170 RE-------ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + I VV DQ G PT +A AI +++ ++ +++ G FH+T G +W Sbjct: 203 TDDKGNPAIIKVVDDQHGNPTFVGALAGAIWELSERVLSEPNSAPTGTFHVTG-SGQATW 261 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A +F + G +V + ++P A RPA+S LD S + + W++ Sbjct: 262 FEVAREVFRLT---GHDPQRVVACTSSEFPRPAPRPAWSVLDGSAWSEVGLHSLPEWQDT 318 Query: 283 VRNILV 288 +R +L Sbjct: 319 LRAVLT 324 >gi|322382628|ref|ZP_08056497.1| dTDP-4-dehydrorhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153396|gb|EFX45814.1| dTDP-4-dehydrorhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 200 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 11/191 (5%) Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 YISTDYVFDG + +P PLN+YG++KL GE S ++ ++RT+WVY +GS Sbjct: 14 YISTDYVFDGCADSPYGTDVLPFPLNVYGRTKLEGEHWTLSLSSRPFVVRTSWVYGQYGS 73 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +MLRL +E R+++VV DQFG PT +A + Q+ T G++H ++ Sbjct: 74 NFVKTMLRLGQEGRKLTVVNDQFGCPTYTADLAGLLEQLLQ-------TDRYGVYH-ASN 125 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 G SW FA+ IF ES G S ++ +++Y A RP+YS L L + + Sbjct: 126 SGACSWYGFAKAIFEES---GLDQSLLHPCSSEEYRQLARRPSYSVLSPDSLTDRGFKPL 182 Query: 277 STWKEGVRNIL 287 W+E +R + Sbjct: 183 RPWREALREFI 193 >gi|255327299|ref|ZP_05368373.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296] gi|255295579|gb|EET74922.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296] Length = 471 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 26/280 (9%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG GQ+ L + Q+V + V R +DL KP+ + F S +IN AAYTA Sbjct: 189 LIIGAGGQLGTELVRQLTEQNVPFLAVDRDRLDLGKPEQWRDAFRWRSFRAVINAAAYTA 248 Query: 63 VDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 VD+AE PE A++ NA G A+A + +P +++STDYVFDG P+ E P + Sbjct: 249 VDQAE-TPEGRREAWAANALGVSALASICEEANLPLVHVSTDYVFDG--SLPLGEEYPED 305 Query: 120 ----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL++YG SK AGE A++ +Y LRT+WV G NF+ +M LA+ + SVV Sbjct: 306 HPLAPLSVYGASKAAGEVAAAAWRKHYT-LRTSWVVGA-GKNFVGTMASLAERGIDPSVV 363 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT +A A + + + E G ++++ G ++WA FA ++ Sbjct: 364 ADQWGRPTFTQDLAAAALHLLFSGAE------YGTYNVSNTGEVINWAQFARAVY---EG 414 Query: 236 RGGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 G ++V T++Y AHRP S +D SKL T Sbjct: 415 TGHDPARVSDTTTEEYFANAELFAHRPTNSAMDLSKLIAT 454 >gi|111023268|ref|YP_706240.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1] gi|110822798|gb|ABG98082.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1] Length = 262 Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 137/283 (48%), Gaps = 32/283 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L + VG ++D+ P S V+IN AAY Sbjct: 3 KILVTGARGQLGGHLLRRAEATGIPARGVGSAELDITDPGAVNEQVEPGS--VVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + + A I++STDYVF G TP + +PT P Sbjct: 61 TAVDAAESDEDTAR--------------------LIHVSTDYVFAGQGDTPYEVDAPTGP 100 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG++KLAGE V + + ++RTAWVY+ GS+F+ +MLRL +ER + VV DQ G Sbjct: 101 ATAYGRTKLAGERAVHAALPSAHVVRTAWVYTGVGSDFVSTMLRLERERDTVDVVDDQVG 160 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A A++++A SD + H T + G SW D A +F E+ G Sbjct: 161 SPTFAGDLADALLELAG----RSDVDAP-VLHAT-NSGRASWFDLARAVFEEA---GADP 211 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V + Q+ A RPA+S L A+ + W++ + Sbjct: 212 ERVRPCTSAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWRDAL 254 >gi|306822149|ref|ZP_07455531.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC 27679] gi|304554531|gb|EFM42436.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC 27679] Length = 485 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 40/304 (13%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ + +Q E + D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVETHGLQGFEFNDIDT--FDFSDPTQYDQFDWSLY-GTIINA 248 Query: 58 AAYTAVDKAE-DEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE DE IA+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 249 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEK----EH 304 Query: 116 SPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK----- 167 S T PL +YG++K AG+ VA+ +Y++ R++WV G NF+ +M+ L+ Sbjct: 305 SETEAFAPLGVYGQTKAAGDIAVANAPRHYIV-RSSWVIGE-GHNFVKTMMMLSNRVADP 362 Query: 168 --ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + E++VV DQ+G T +A AI H L N++ G +++T G SWAD Sbjct: 363 NDQLNEVTVVDDQYGRLTFTTDMAEAIF---HLLDTNAE---YGTYNLTGSGAVKSWADI 416 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWK 280 A+ +F E+ G KV I T QY A RP S L+ +K+ T ++ + W+ Sbjct: 417 AKAVFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-DLSVPDWE 472 Query: 281 EGVR 284 E ++ Sbjct: 473 ESLK 476 >gi|309802229|ref|ZP_07696337.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium JCVIHMP022] gi|308221112|gb|EFO77416.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium JCVIHMP022] Length = 482 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 40/304 (13%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ + +Q E + D P + F S IIN Sbjct: 189 RTMVTGCNGQLGHAIRDYVETHGLQGFEFNDIDT--FDFSDPTQYDQFDWSLY-GTIINA 245 Query: 58 AAYTAVDKAE-DEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE DE IA+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 246 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEK----EH 301 Query: 116 SPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK----- 167 S T PL +YG++K AG+ VA+ +Y++ R++WV G NF+ +M+ L+ Sbjct: 302 SETEAFAPLGVYGQTKAAGDIAVANAPRHYIV-RSSWVIGE-GHNFVKTMMMLSNRVADP 359 Query: 168 --ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + E++VV DQ+G T +A AI H L N++ G +++T G SWAD Sbjct: 360 NDQLNEVTVVDDQYGRLTFTTDMAEAIF---HLLDTNAE---YGTYNLTGSGAVKSWADI 413 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWK 280 A+ +F E+ G KV I T QY A RP S L+ +K+ T ++ + W+ Sbjct: 414 AKAVFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-DLSVPDWE 469 Query: 281 EGVR 284 E ++ Sbjct: 470 ESLK 473 >gi|116671224|ref|YP_832157.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24] gi|116611333|gb|ABK04057.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24] Length = 474 Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 146/276 (52%), Gaps = 20/276 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAY 60 K LV+G +GQ+ ++L + D + GR DL F + ++S IIN AAY Sbjct: 191 KILVVGADGQLGKALRELYDGDATVEFAGRSGFDLGSEASFTERNWKNYS--TIINAAAY 248 Query: 61 TAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVD AE + A+++N +A+ A G+ +++S+DYVFDG+ R DE P Sbjct: 249 TAVDTAETAEGRAAAWAVNVAAVARLARTAVEHGLTLVHVSSDYVFDGV-RESHDETEPF 307 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG++K AG+ V+ +Y++ RT+WV G+NF+ +M LA E SVV DQ Sbjct: 308 TPLGVYGQTKAAGDAVVSVVPRHYIV-RTSWVIGE-GNNFVRTMASLAGRGIEPSVVNDQ 365 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G + IA I H L +D G ++++ DG P SWAD A ++ S G Sbjct: 366 IGRLSFTEDIAAG---IQHLLDSGAD---YGTYNLSNDGEPQSWADIAADVYELS---GQ 416 Query: 239 PYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 P + V + T++Y A RP S LD +KL N+ Sbjct: 417 PRTAVTGVSTEEYFKGKAAAPRPLNSVLDLTKLKNS 452 >gi|145223884|ref|YP_001134562.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|315444213|ref|YP_004077092.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|145216370|gb|ABP45774.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|315262516|gb|ADT99257.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 477 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 154/278 (55%), Gaps = 21/278 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK-DFASFFLSFSPDVIINPAAY 60 K LV+G +GQ+ ++L + + + R ++DL P D A + + D I+N AAY Sbjct: 188 KTLVLGADGQLGRALRAAYAEAPHVEFATRAELDLCAPDLDSARRWRDY--DTIVNAAAY 245 Query: 61 TAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVD AE + A+++N G A+A+ A + GI +++S+DYVFDG + +P E P Sbjct: 246 TAVDAAETSEGRTAAWTVNVTGVAALARVATAHGITLVHVSSDYVFDGSAASPYREDDPL 305 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG++K AG++ V++ +YV+ RT+WV G NF+ +ML LA + + +VV DQ Sbjct: 306 SPLGVYGQTKAAGDQLVSTVPRHYVV-RTSWVVGE-GRNFVQTMLSLAAKGVDPAVVDDQ 363 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG T ++ARA+ +L E+ + G ++++ G +WAD A F G Sbjct: 364 FGRLTFTSELARAV----RHLTESR--APYGTYNVSGSGTERTWADIARRTF---DLAGH 414 Query: 239 PYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANT 271 +V + T +Y + A RPA S LD K+ T Sbjct: 415 DPRRVRGVSTAEYFSAATAPVAPRPARSVLDLGKIEAT 452 >gi|118618082|ref|YP_906414.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium ulcerans Agy99] gi|118570192|gb|ABL04943.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium ulcerans Agy99] Length = 308 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 85/238 (35%), Positives = 120/238 (50%), Gaps = 19/238 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF------- 104 DV+IN AAYT VD AE + A+++NA G +AKA G I++STDYVF Sbjct: 56 DVVINCAAYTDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADL 115 Query: 105 -DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSM 162 DG P + T P +Y +SK AGE V + + V++R+AWVY+ GS+F+ M Sbjct: 116 PDGAQPQPYEPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIM 175 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 RLA + VV DQ G+PT +A A++++A D +RG A+GG VS Sbjct: 176 RRLAAGEGPVDVVDDQTGSPTYVADLAAALLEVA-------DAGVRGRLLHAANGGAVSR 228 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 A +F E G +V + T Q+P RP YS L + A + W+ Sbjct: 229 FGLARAVFEEC---GTDPQRVRPVSTAQFPRPVVRPGYSALGGRQWAAAGLTPLRPWR 283 >gi|325067630|ref|ZP_08126303.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces oris K20] Length = 309 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 153/278 (55%), Gaps = 22/278 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ ++L ++ Q + I V P++D+ +S+ + D+IIN AA+ Sbjct: 27 RVLVTGANGQLGRALMALLPQAGFDPIGVDLPEVDISDAAAMSSWDWT-GYDIIINAAAW 85 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG++ +E +P Sbjct: 86 TNVDGAE-TPEGRRLSWRANTVGPVNLARAAVQHGLTLVHLSTEYTFDGVTAVHTEEETP 144 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + PL +YG+SK AG+ V+ +Y++ RT+WV G NF+ +ML LA+ VV D Sbjct: 145 S-PLGVYGQSKAAGDAAVSVCPRHYLV-RTSWVVG-DGKNFVKTMLSLAERGISPQVVAD 201 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T A +A II + + E G ++++ DG +SWAD A+ ++ ESA G Sbjct: 202 QTGRLTFASDLAAGIIHLITSGAEF------GTYNLSGDGPILSWADIAKRVY-ESA--G 252 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 +V + T++Y A RP S LD +++ T Sbjct: 253 HSPDEVTPVTTEEYYAGQEGIAPRPLSSALDLARIKAT 290 >gi|262201794|ref|YP_003273002.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247] gi|262085141|gb|ACY21109.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247] Length = 319 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 145/297 (48%), Gaps = 30/297 (10%) Query: 5 VIGNNGQIAQSLSSMCVQDV---EIIRVGRPDIDLLKPKDFASFFLSF----SPDVIINP 57 ++G GQ+ +L + D +I + D+D+ D AS + + DV+IN Sbjct: 14 IVGAAGQLGTALRARRPADFPGHDIRALTSADLDI---GDEASVRAALGDLAAGDVVINC 70 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAYT VD A+ + A+ +NA+G +A+A + G I++STDYVF G R+ Sbjct: 71 AAYTDVDGAQSDEAGAYRVNADGPAHLARATVAAGAWLIHVSTDYVFSGQVGGSETGPRS 130 Query: 111 PIDEFSPTN-----PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF--GSNFLLSML 163 P + P + P +YG SKLAGE ++RTAWVY+ +F+ +M Sbjct: 131 PALPYEPDDVGEVIPATVYGASKLAGERSALDTDPRTTVVRTAWVYTGGPDSRDFVGTMR 190 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 RL + R +SVV DQ G+PT A +A + ++A ++ + H T + G SW Sbjct: 191 RLEQTRETVSVVDDQVGSPTYARDLADGLWELAAT--GPTEAVAGAVLHGT-NAGRASWY 247 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + A +F A+ G +V+ T ++P A RPA+S L + A + W+ Sbjct: 248 EVARAVF---AQVGASPDRVHPCTTAEFPRPAPRPAFSVLSGASWAAAGLRPLREWR 301 >gi|196232434|ref|ZP_03131287.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] gi|196223506|gb|EDY18023.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] Length = 296 Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%) Query: 2 KCLVIGNNGQI-AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G+ G++ A L + E++ R +DL + DV++N AA Sbjct: 4 KIVIVGSGGRLGAALLREWRERGEEVVGFNRELLDLGDFSAIRERLDALEFDVLVNCAAQ 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+ E EPE AF +N+ G A+A CI+ISTDYVFDG P E P Sbjct: 64 TNVDRCECEPEEAFRVNSGGVAALADVCTRKKARCIHISTDYVFDGTKEKPYTEDDEPRP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG+SKL+GE + + ++ ++I+R +WV+ ++F+ +++ A + + + D+ Sbjct: 124 ISKYGESKLSGERCLQAVSDRHLIVRVSWVFGPDRASFVDQIIQRALTQDRVEAIADKIS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT L AR + L+E + G+ H+ + G SW + ++ +A G P Sbjct: 184 VPTYTLDAAR----LLWPLVEQPEVG--GVMHL-CNAGECSWQQYGQHALNCAAALGMPL 236 Query: 241 SKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + K K A RP Y+ L K I W E V + I Sbjct: 237 CTQHVEPLKLAEMKNFVAARPRYTPLATKKFTGITGITPRPWTEAVEEYVRTI 289 >gi|171742181|ref|ZP_02917988.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC 27678] gi|171277795|gb|EDT45456.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC 27678] Length = 485 Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 40/304 (13%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ + +Q E + D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVETHGLQGFEFNDIDT--FDFSDPTQYDQFDWSLY-GTIINA 248 Query: 58 AAYTAVDKAE-DEPE-IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE DE IA+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 249 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEK----EH 304 Query: 116 SPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA------ 166 S T PL +YG++K AG+ VA+ +Y++ R++WV G NF+ +M+ L+ Sbjct: 305 SETEAFAPLGVYGQTKAAGDIAVANVPRHYIV-RSSWVIGE-GHNFVKTMMMLSDRVADP 362 Query: 167 -KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + E++VV DQ+G T +A AI H L N++ G +++T G SWAD Sbjct: 363 NDQLNEVTVVDDQYGRLTFTTDMAEAIF---HLLDTNAE---YGTYNLTGSGAVKSWADI 416 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWK 280 A+ +F E+ G KV I T QY A RP S L+ +K+ T + + W+ Sbjct: 417 AKAVFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-GLNVPDWE 472 Query: 281 EGVR 284 E ++ Sbjct: 473 ESLK 476 >gi|41409478|ref|NP_962314.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398309|gb|AAS05930.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10] Length = 307 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 146/300 (48%), Gaps = 24/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ LS++ Q +++ + D+ P A+ + DV+IN AAY Sbjct: 4 RIVIAGAGGQLGGYLSALAAGQGRDVVALTSAQWDITDPA--AAEHIVRPGDVVINCAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-------PID 113 T VD AE + AF++N G G IA+A G +++STDYVF G S P + Sbjct: 62 TDVDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYE 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS-IFGSNFLLSMLRLAKER 169 P P +Y +SK+AGE V + + V++RTAWVY+ G +F+ M RLA Sbjct: 122 PGDPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGE 181 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G+PT +A A++QI + + + H A+ G VS + A + Sbjct: 182 GPVQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARAV 234 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 F E G ++V + T+ +P A RP YS L + A + W+ + L N Sbjct: 235 FEEC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTN 291 >gi|116327947|ref|YP_797667.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120691|gb|ABJ78734.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 306 Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 149/304 (49%), Gaps = 31/304 (10%) Query: 7 GNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G +GQ+ L+ D+E I R + DL D L SP ++++ AYTAVDK Sbjct: 6 GKSGQLGWELTKRFKSLDLESIGFSREEWDLTD-LDSVEKILKDSPKILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E + IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE + + + + I+RT+WVYS +G+NF ++L+L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELKV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA------EY 228 + DQ G PT A ++A II + + +++ I H ++ G SW DFA Y Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYEILKKG--GYPEILHF-SNSGIASWYDFAIAIRDISY 241 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI--RISTWKEGVRNI 286 F E P S I T+ YPT A RP YS LD L T I + WKE + Sbjct: 242 SF-SLIENLKPISP---IPTESYPTAAPRPRYSILD---LNETRKIFGPVPHWKEDLTLC 294 Query: 287 LVNI 290 L I Sbjct: 295 LKEI 298 >gi|330468517|ref|YP_004406260.1| dTDP-4-dehydrorhamnose reductase [Verrucosispora maris AB-18-032] gi|328811488|gb|AEB45660.1| dTDP-4-dehydrorhamnose reductase [Verrucosispora maris AB-18-032] Length = 290 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 7/213 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV++N AA+T VD AE + A ++N +A A + G +++STDYVF G + TP Sbjct: 48 DVVLNAAAWTDVDGAEQDEAAATAVNGAAVAHLATACATHGAYLLHVSTDYVFAGDADTP 107 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E +PT P+N YG+SKL GE+ V + ++RTAW+Y G NF+ +ML LA++R Sbjct: 108 YPEDAPTAPVNAYGRSKLVGEQAVRRLLPDRGHVVRTAWLYGTHGRNFVTTMLGLAQQRD 167 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G PT + +A ++++A + + GI+H T G +W A +F Sbjct: 168 FLDVVDDQRGQPTWSYALAEQLVRLAEAARDGR--ARPGIWHGTCT-GETTWYGLARAVF 224 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 A G ++ + ++P A RPAYS L Sbjct: 225 ---ALHGLDPDRIRPTTSSRFPRPAARPAYSVL 254 >gi|254303461|ref|ZP_04970819.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323653|gb|EDK88903.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 298 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFKELFDSMGEKYIATDKNEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VDKAE E E+ + +NAE +A A IG I STD+VFDG+ T Sbjct: 62 AAYNDVDKAETEKELCYKVNAEAPANLAMIASEIGATYITYSTDFVFDGMMTNYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE ++ N I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSAYAKAKYEGELLISQIMENPKNTSRIYIVRTSWVFGKGSMNFVEKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L+KE+ E+ VV DQ +PT + +A + LI+ S GI+H+T DG + + Sbjct: 182 LSKEKDELKVVDDQVSSPTYSKDLA----YFSWELIKKGCES--GIYHLTNDGIASKYEE 235 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R ++ A RP +S L C K+ I I WK+ + Sbjct: 236 -AQYILEKISWKGN----LIRAKREELGLLAERPKFSKLSCKKIKEKLGISIPNWKDAI 289 >gi|320095968|ref|ZP_08027584.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977099|gb|EFW08826.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178 str. F0338] Length = 472 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 144/281 (51%), Gaps = 29/281 (10%) Query: 2 KCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 + LV G NGQ+ + L + V++ V D D ++ D++SF DV++ Sbjct: 191 RVLVTGANGQLGRELMRQLPAAGFEATGVDLPEVSIADADQMEAFDWSSF------DVVV 244 Query: 56 NPAAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 N AA+T VD AE D ++ NA G +A+A S G+ ++IS++YVFDG + + Sbjct: 245 NAAAWTDVDGAETPDGRRASWLANATGPANLARACASHGLTLVHISSEYVFDGSAEVHPE 304 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 + +P+ PL +YG+SK G+ V + +Y++ RTAWV G NF+ +M LA Sbjct: 305 DEAPS-PLGVYGQSKAGGDAAVLAAPKHYLV-RTAWVVGD-GKNFIRTMASLACSGVRPQ 361 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G T +A II + S + G +++T +G +SWAD A ++ Sbjct: 362 VVDDQVGRLTFTTDLAAGIIHLL------STRAPHGTYNLTGEGPVMSWADVATRVY--- 412 Query: 234 AERGGPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 G S+V R+ T+QY A RP S LD +K+ T Sbjct: 413 ELLGHDASEVTRVSTEQYYADKGGAPRPLSSVLDLAKIEAT 453 >gi|116330829|ref|YP_800547.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124518|gb|ABJ75789.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 306 Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 149/304 (49%), Gaps = 31/304 (10%) Query: 7 GNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G +GQ+ L+ D+E I R + DL D L SP ++++ AYTAVDK Sbjct: 6 GKSGQLGWELTKRFKSLDLESIGFSREEWDLTD-LDSVEKILKDSPKILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E + IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE + + + + I+RT+WVYS +G+NF ++L+L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELKV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA------EY 228 + DQ G PT A ++A II + + +++ I H ++ G SW DFA Y Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYEILKGG--GYPEILHF-SNSGIASWYDFAIAIRDISY 241 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI--RISTWKEGVRNI 286 F E P S I T+ YPT A RP YS LD L T I + WKE + Sbjct: 242 SF-SLIENLKPISP---IPTESYPTAAPRPRYSILD---LNETRKIFGPVPHWKEDLTLC 294 Query: 287 LVNI 290 L I Sbjct: 295 LKEI 298 >gi|15827318|ref|NP_301581.1| dTDP-rhamnose modification protein [Mycobacterium leprae TN] gi|221229796|ref|YP_002503212.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae Br4923] gi|13092867|emb|CAC30260.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae] gi|219932903|emb|CAR70845.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae Br4923] Length = 311 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 19/245 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----- 106 DV++N AAYT VD AE A+++NA G IA+A G I++STDYVF G Sbjct: 60 DVVVNCAAYTNVDGAESNELAAYAVNATGPEYIARACRCAGAALIHVSTDYVFSGDFGSG 119 Query: 107 ---LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSM 162 ++ P + T PL +YG+SKLAGE+ V + ++RTAWVY+ G +F+ M Sbjct: 120 ANRVAPRPYEPTDETGPLGVYGRSKLAGEQAVLAAMPEATVVRTAWVYTGGTGKDFVAVM 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 RLA + VV DQ G+PT + +A A++Q+A D S+ G A+ G VS Sbjct: 180 RRLAAGDGPVYVVDDQIGSPTYVVDLAAALLQVA-------DGSVHGSVLHAANEGEVSR 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 A +F E G +V + T Q P A RPAYS L + + W+ Sbjct: 233 FGQARAVFEEC---GADPLQVQPVSTAQNPRSAARPAYSALSGRQSVAAGLTPLRPWRSA 289 Query: 283 VRNIL 287 + L Sbjct: 290 LVEAL 294 >gi|302560673|ref|ZP_07313015.1| dTDP-4-dehydrorhamnose reductase [Streptomyces griseoflavus Tu4000] gi|302478291|gb|EFL41384.1| dTDP-4-dehydrorhamnose reductase [Streptomyces griseoflavus Tu4000] Length = 306 Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 7/231 (3%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P V++N AA+TAVD AE A ++N +G +A A G +++STDYVF G + Sbjct: 63 PAVVVNCAAWTAVDDAETREAEALAVNGDGPARLADACARTGAVLLHVSTDYVFAGDATA 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P E +PT P + YG++KLAGE V + + ++RTAW+Y G+NF+ +M+RL +R Sbjct: 123 PYAEDAPTAPRSAYGRTKLAGERAVLNTLPDRGYVVRTAWLYGTGGANFVRTMIRLEGQR 182 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++ VV DQ G PT + + A + +A + T+ G++H T+ G +W I Sbjct: 183 EKLDVVDDQRGQPTWSADL--AGLLLALGRGALAGTAPPGVYHGTSS-GETTWYGLTREI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 F G +V+ ++ + A RPAYS L + A + W+ Sbjct: 240 F---RLLGADPDRVHPTTSEAFVRPAPRPAYSVLGHDRFAAAGVAPLRDWR 287 >gi|4234802|gb|AAD12970.1| RmlD [Leptospira borgpetersenii] Length = 306 Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 106/304 (34%), Positives = 149/304 (49%), Gaps = 31/304 (10%) Query: 7 GNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G +GQ+ L+ D+E I R + DL D L SP ++++ AYTAVDK Sbjct: 6 GKSGQLGWELTKRFKSLDLESIGFSREEWDLTD-LDSVEKILKDSPKILVHCGAYTAVDK 64 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF------SPTN 119 AE + E + IN+ I++ I IYISTD+VFD S T D S + Sbjct: 65 AESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTLS 124 Query: 120 PLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISV 174 P IYG SK GE + + + + I+RT+WVYS +G+NF ++L+L ++ R E+ V Sbjct: 125 PKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELKV 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA------EY 228 + DQ G PT A ++A II + + +++ I H ++ G SW DFA Y Sbjct: 185 IEDQLGRPTWAGRLADFIIFLIYEILKKG--GYPEILH-PSNSGIASWYDFAIAIRDISY 241 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI--RISTWKEGVRNI 286 F E P S I T+ YPT A RP YS LD L T I + WKE + Sbjct: 242 SF-SLIENLKPISP---IPTESYPTAAPRPRYSILD---LNETRKIFGPVPHWKEDLTLC 294 Query: 287 LVNI 290 L I Sbjct: 295 LKEI 298 >gi|31794446|ref|NP_856939.1| dTDP-rhamnose modification protein RmlD [Mycobacterium bovis AF2122/97] gi|121639155|ref|YP_979379.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|215428749|ref|ZP_03426668.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis T92] gi|215432231|ref|ZP_03430150.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis EAS054] gi|219559325|ref|ZP_03538401.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis T17] gi|224991648|ref|YP_002646337.1| putative dTDP-rhamnose modification protein [Mycobacterium bovis BCG str. Tokyo 172] gi|260188315|ref|ZP_05765789.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis CPHL_A] gi|260202428|ref|ZP_05769919.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis T46] gi|260206618|ref|ZP_05774109.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis K85] gi|289444848|ref|ZP_06434592.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis T46] gi|289448955|ref|ZP_06438699.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CPHL_A] gi|289571494|ref|ZP_06451721.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T17] gi|289575986|ref|ZP_06456213.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis K85] gi|289751960|ref|ZP_06511338.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T92] gi|289755389|ref|ZP_06514767.1| dTDP-rhamnose modification protein RmlD [Mycobacterium tuberculosis EAS054] gi|31620042|emb|CAD95386.1| POSSIBLE DTDP-RHAMNOSE MODIFICATION PROTEIN RMLD [Mycobacterium bovis AF2122/97] gi|121494803|emb|CAL73284.1| Possible dTDP-rhamnose modification protein rmlD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774763|dbj|BAH27569.1| putative dTDP-rhamnose modification protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289417767|gb|EFD15007.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis T46] gi|289421913|gb|EFD19114.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CPHL_A] gi|289540417|gb|EFD44995.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis K85] gi|289545248|gb|EFD48896.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T17] gi|289692547|gb|EFD59976.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T92] gi|289695976|gb|EFD63405.1| dTDP-rhamnose modification protein RmlD [Mycobacterium tuberculosis EAS054] Length = 304 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 141/285 (49%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P A+ + DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPA--AAERIIRHGDVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFD G P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY+ G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT + +A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTY-------VADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A RP+YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRPSYSALSSRQWALAGLTPLRHWR 279 >gi|19705019|ref|NP_602514.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712929|gb|AAL93813.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 298 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 144/299 (48%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-------RT 110 AAY VDKAE E E+ + NAE +A A IG I STD+VF+G++ T Sbjct: 62 AAYNDVDKAETEKELCYKANAEAPANLAMIASEIGATYITYSTDFVFNGMTTNYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ N I+RT+WV+ G NF+ ++ Sbjct: 122 GYTEEDEAHPLSAYAKAKYEGELLVSQIIENPENTSRIYIVRTSWVFGKGGMNFVEKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L+KE+ E+ VV DQ +PT + +A ++ E+ G++H+T D VS + Sbjct: 182 LSKEKDELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GVYHLTND-SIVSKYE 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ + Sbjct: 235 EAQYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|315606109|ref|ZP_07881140.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312391|gb|EFU60477.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces sp. oral taxon 180 str. F0310] Length = 475 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 145/277 (52%), Gaps = 21/277 (7%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L +++ + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMAALPAAGFSVTGVDLPEVSISDAQQVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE ++ NA G +A+ A + G+ ++IST+YVFDG +++ +P Sbjct: 252 TNVDGAE-TPEGRRASWQANATGPALLAREATAHGVTVVHISTEYVFDGTQEVHVEDEAP 310 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + PL +YG+SK G+ VAS +Y I+RT+WV G NF+ +M LA++ SVV D Sbjct: 311 S-PLGVYGQSKAGGDAAVASTPRHY-IVRTSWVVGD-GKNFIKTMASLARQGVSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A II + SD G ++++ +G +SWA+ A +F G Sbjct: 368 QVGRLTFTSDLAAGIIHLL-----TSDAPF-GTYNLSGEGPVMSWAEVAARVF---ELCG 418 Query: 238 GPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 + V + T++Y A RP S LD SK+ T Sbjct: 419 RERADVTFVTTEEYFAGRDAAPRPLSSVLDLSKIEAT 455 >gi|260495065|ref|ZP_05815194.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_33] gi|260197508|gb|EEW95026.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_33] Length = 298 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 147/304 (48%), Gaps = 33/304 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNG-DFLRAYIKTMNQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SR 109 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL S Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSML 163 I+E P +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ ++ Sbjct: 122 GYIEEDEP-HPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKII 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S Sbjct: 181 EWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKY 233 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 D A+YI + + +G + R ++++ A RP +S L C K+ + I +WK+ + Sbjct: 234 DQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGVSIPSWKDAI 289 Query: 284 RNIL 287 L Sbjct: 290 DRYL 293 >gi|269219066|ref|ZP_06162920.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211213|gb|EEZ77553.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 848 str. F0332] Length = 339 Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/283 (34%), Positives = 143/283 (50%), Gaps = 15/283 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPA 58 M+ L+ G G + Q L++ V+D ++I V DID + D AS + DV++N A Sbjct: 59 MRWLIAGAKGMLGQDLTARVVKDGHDLIAV---DIDGIDITDPASVREIVKDVDVVVNVA 115 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD AE++ AF++NA G +A+ IG ++ISTDYVF G + +P E Sbjct: 116 AFTAVDAAEEKEAAAFTVNATGPEILARRCREIGARFVHISTDYVFSGDATSPYREDGLL 175 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K AGE V T++Y+I+RTAW+Y G F +M L++ +SVV D+ Sbjct: 176 EPKGAYGRTKAAGEWAVRCNTDDYLIVRTAWLYGAGGKCFPKTMRDLSQTHETLSVVTDE 235 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + +A I++ L++ + GI+H T+ G +W F I A G Sbjct: 236 VGQPTWTVDLADLIVR----LVDAEAPT--GIYHGTSS-GKTNWHGFTREIV---ASIGK 285 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + A RP YS L L I WKE Sbjct: 286 DPDMVKETTAAAFKRPAPRPHYSVLGHDALERIGVEPIGDWKE 328 >gi|269794232|ref|YP_003313687.1| dTDP-4-dehydrorhamnose reductase [Sanguibacter keddieii DSM 10542] gi|269096417|gb|ACZ20853.1| dTDP-4-dehydrorhamnose reductase [Sanguibacter keddieii DSM 10542] Length = 297 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 13/281 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V+G G + Q + + +D ++ + R ++D+ + + DV++N A+ Sbjct: 16 RWAVVGAAGMLGQDVVARLERDGRDVTALTRAELDVTDAAACLAALAGY--DVVVNCTAW 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + AF++NA GA +A+AA + G + +STDYVF G + TP + + P Sbjct: 74 TAVDDAETQEGAAFAVNAVGAANLAQAAAARGARLVQVSTDYVFAGSATTPYEADAVVAP 133 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K AGE V + + + ++RTAW+Y G +F ++ R+A ER +SVV DQ G Sbjct: 134 VSAYGRTKAAGEWAVRAASPQHHVVRTAWLYGAGGGSFPRTIARVAGERGAVSVVDDQRG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++++ + G FH T+ G +W DFA A G Sbjct: 194 QPTWTGDVADLVVRLVDADVPG------GTFHATSS-GEATWFDFAREAV---ATAGLDR 243 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + + A RP+YS L + L I W++ Sbjct: 244 DVVTPTTSADFVRPAPRPSYSVLGHASLVAAGVTPIGDWRD 284 >gi|256028658|ref|ZP_05442492.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] gi|289766571|ref|ZP_06525949.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] gi|289718126|gb|EFD82138.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] Length = 298 Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 33/304 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNG-DFLRAYIKTMNQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SR 109 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL S Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSML 163 I+E P +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ ++ Sbjct: 122 GYIEEDEP-HPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKII 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S Sbjct: 181 EWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKY 233 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 D A+YI + + +G + R ++++ A RP +S L C K+ + I WK+ + Sbjct: 234 DQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 Query: 284 RNIL 287 L Sbjct: 290 DRYL 293 >gi|225848196|ref|YP_002728359.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643418|gb|ACN98468.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1] Length = 281 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 13/285 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ S + + + + + + D+ K + P+V+IN +A Sbjct: 1 MKFLVFGKNGQLGTEFSQYFEINNYTYLSLSKTECDITNFKLVEKIIKDYKPNVVINCSA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE+E + AF +NA + I+ STDYVFDG + E N Sbjct: 61 YNLVDKAEEEFKEAFEVNAFAIKNLGLLCQEYKCFLIHYSTDYVFDGTKQDFYTEEDLPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+IY KSK AGE+ + +Y+I R +WVY NFL + + A + + D+F Sbjct: 121 PLSIYAKSKYAGEKFIKETLEHYLIFRVSWVYGKGKQNFLYKLNQWAATHSMLKIAVDEF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTS R I++I ++ L G++H+T G + EY+ + ++ Sbjct: 181 SVPTS----TRTIVEITLKALKQ---GLTGLYHLTNSGYASRYEWSKEYLKLKQVDKL-- 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +Y + + A RP +S + K++ N I W E ++ Sbjct: 232 ---IYPAYQSDFNLPAKRPKWSVMSNQKISKILNTDIPLWNEELK 273 >gi|254776666|ref|ZP_05218182.1| RmlD [Mycobacterium avium subsp. avium ATCC 25291] Length = 302 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 145/298 (48%), Gaps = 24/298 (8%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G GQ+ +S++ Q +++ + D+ P A+ + DV+IN AAYT Sbjct: 1 MIAGAGGQLGGYVSALAAGQGRDVVALTSAQWDITDPA--AAERIVRPGDVVINCAAYTD 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-------PIDEF 115 VD AE + AF++N G G IA+A G +++STDYVF G S P + Sbjct: 59 VDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEPG 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS-IFGSNFLLSMLRLAKERRE 171 P P +Y +SK+AGE V + + V++RTAWVY+ G +F+ M RLA Sbjct: 119 DPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEGP 178 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PT +A A++QI + + + H A+ G VS + A +F Sbjct: 179 VQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARAVFE 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++V + T+ +P A RP YS L + A + W+ + L N Sbjct: 232 EC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTN 286 >gi|118465938|ref|YP_883372.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104] gi|118167225|gb|ABK68122.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104] Length = 302 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 145/298 (48%), Gaps = 24/298 (8%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G GQ+ +S++ Q +++ + D+ P A+ + DV+IN AAYT Sbjct: 1 MIAGAGGQLGGYVSALAADQGRDVVALTSAQWDITDPA--AAERIVRPGDVVINCAAYTD 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-------PIDEF 115 VD AE + AF++N G G IA+A G +++STDYVF G S P + Sbjct: 59 VDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEPG 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS-IFGSNFLLSMLRLAKERRE 171 P P +Y +SK+AGE V + + V++RTAWVY+ G +F+ M RLA Sbjct: 119 DPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEGP 178 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PT +A A++QI + + + H A+ G VS + A +F Sbjct: 179 VQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARAVFE 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++V + T+ +P A RP YS L + A + W+ + L N Sbjct: 232 EC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTN 286 >gi|327400446|ref|YP_004341285.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6] gi|327315954|gb|AEA46570.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6] Length = 289 Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 125/243 (51%), Gaps = 27/243 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIR--------VGRP-DIDLLKPKDFASFFLSFS 50 M+ + G +G + ++ + ++ E+ G+P IDL P Sbjct: 1 MRIFITGGSGLLGHRIAEIALEKGYEVYSGYCHNHPSAGKPVKIDLSNPVSIFETIKDAK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VDK E E E+AF IN EG AIA+A + IY+STDYVFDG + Sbjct: 61 PDVIMHTAALTNVDKCEKEKELAFRINVEGTKAIAEAVRKLNSFLIYVSTDYVFDG-RKG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E TNP+N YG +KL GE+ Y ++ I RT +Y + NF+L ++ Sbjct: 120 MYREEDETNPVNYYGHTKLLGEQ----YCKDFCIARTCVIYGAKPASGKVNFVLWLIDKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + ++ +V DQ+ TPT +A+ +++IA + L+G+FH+ A VS +FA Sbjct: 176 RNGEKVRIVTDQYITPTLNTNLAKMMLEIA-------EKGLKGVFHL-AGATRVSRFEFA 227 Query: 227 EYI 229 E + Sbjct: 228 ETL 230 >gi|270284084|ref|ZP_05965516.2| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium gallicum DSM 20093] gi|270278058|gb|EFA23912.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium gallicum DSM 20093] Length = 503 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 38/308 (12%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +S+ + +Q E + + D PK + + S IIN Sbjct: 210 RTLVTGCNGQLGRSIRQYVENHGLQGFEFTDID--EFDFSDPKSYEQYDWSLY-GTIINA 266 Query: 58 AAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPID 113 A+TAVDKAE E ++A+ NA+G +AK A I ++IS+DYVFDG + T + Sbjct: 267 GAFTAVDKAETEEGRKLAWKANAQGPALLAKVAADHHIVLVHISSDYVFDGTQQLHTEDE 326 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK------ 167 FS PL +YG++K AG+ V++ +Y ILR++WV G NF+ +M+ L+K Sbjct: 327 AFS---PLGVYGQTKAAGDIAVSNVPEHY-ILRSSWVIGN-GHNFVKTMMNLSKRVANPT 381 Query: 168 -ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQFG T ++A AI + + + G ++MT G SWA A Sbjct: 382 DQLEQVTVVNDQFGRLTFTDEMAAAIFFLLGSSV------AYGTYNMTGSGDVTSWAQIA 435 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 + +F ++ G V I T++Y A+ RP S LD KL I + W+E Sbjct: 436 KEVFNLTSGNG---EAVKPITTQEYFLNANAPVSPRPTNSALDLGKLEEAGFIP-ADWEE 491 Query: 282 GVRNILVN 289 + + + Sbjct: 492 SLEEYVAH 499 >gi|262038045|ref|ZP_06011452.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia goodfellowii F0264] gi|261747937|gb|EEY35369.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia goodfellowii F0264] Length = 286 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 16/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINP 57 MK L+IG++GQ+ + + E I ++D+ K +FF + D+ IIN Sbjct: 1 MKILLIGSDGQLGYEFKRLFDSLNKEYIATDYQNLDITDEKALNNFF-TIHKDITHIINC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY VDKAE E + +N E +A+ + +I STD+VFDG P E Sbjct: 60 AAYNDVDKAESEDDKVRLLNTEAPKKLAEISKNINAVYTTYSTDFVFDGEKGKPYIEEDK 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NPL Y +SK GE+KV + I+RT+W++ I +NF ++ +K + + VV D Sbjct: 120 INPLCKYAESKAEGEKKVFETYDKSFIIRTSWLFGIGNNNFSKQIINWSKIQDTLKVVDD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q PT + +A + LI+ T G++H++++ G S D A+YI ++ Sbjct: 180 QISAPTYSKDLAL----FSWKLIQ---TRKYGMYHISSN-GVASKYDQAKYIL----DKI 227 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G K+ + T + A R YS LD K+ +I WK G+ L Sbjct: 228 GWKGKLEKARTFDFKLPAKRSKYSKLDSGKIERLLGEKIPDWKNGIDRFL 277 >gi|183602162|ref|ZP_02963530.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium animalis subsp. lactis HN019] gi|219683072|ref|YP_002469455.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp. lactis AD011] gi|241191394|ref|YP_002968788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196800|ref|YP_002970355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218655|gb|EDT89298.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium animalis subsp. lactis HN019] gi|219620722|gb|ACL28879.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp. lactis AD011] gi|240249786|gb|ACS46726.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251354|gb|ACS48293.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177519|gb|ADC84765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794387|gb|ADG33922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis V9] Length = 483 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 152/301 (50%), Gaps = 34/301 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ QS+ V++ ++ DID P + + S IIN Sbjct: 190 RTLVTGANGQLGQSIRK-YVEEHDLKGFEFTDIDEFDFSDPAAYEGYDWSLY-GTIINAG 247 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A+TAVDKAE PE A+ NA G +AK A + +++S+DYVFDG ++ DE Sbjct: 248 AFTAVDKAE-TPEGRVTAWKANALGPALLAKVATEHNLTLVHVSSDYVFDGTAKVH-DED 305 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE------- 168 +PL +YG++K AG+ VA+ +Y++ R++WV G NF+ +M+ L+ + Sbjct: 306 EAFSPLGVYGQTKAAGDIAVANAPKHYIV-RSSWVIGN-GHNFVKTMMMLSNKVSDPNDA 363 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E++VV DQ+G T +A AI +L+++ D G + +T G VSWA A Sbjct: 364 LNEVTVVDDQYGRLTFTDDMAAAIF----HLLDDEDP--YGTYDLTGSGDVVSWAQIAAE 417 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F A G KV I T+QY A RP S LD +K+ T + W + + Sbjct: 418 VF---AMTNGNGDKVRPISTEQYFESAKAPVSPRPTNSTLDLAKIEET-GYETTDWHDSL 473 Query: 284 R 284 + Sbjct: 474 K 474 >gi|237743315|ref|ZP_04573796.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 7_1] gi|229433094|gb|EEO43306.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 7_1] Length = 298 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 33/304 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNG-DFLRAYIKTMNQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SR 109 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL S Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSML 163 I+E P +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ ++ Sbjct: 122 GYIEEDEP-HPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKII 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S Sbjct: 181 EWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKY 233 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 D A+YI + + +G + R ++++ A RP +S L C K+ + I WK+ + Sbjct: 234 DQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGMSIPNWKDAI 289 Query: 284 RNIL 287 L Sbjct: 290 DRYL 293 >gi|25026899|ref|NP_736953.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium efficiens YS-314] gi|259506038|ref|ZP_05748940.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium efficiens YS-314] gi|23492179|dbj|BAC17153.1| putative dTDP-4-keto-6-deoxyglucose-3,5- epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium efficiens YS-314] gi|259166374|gb|EEW50928.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium efficiens YS-314] Length = 459 Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 136/271 (50%), Gaps = 17/271 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G GQ+ +L ++ D E V R D+D+ A + +S IIN AAYT Sbjct: 187 KVLVTGAGGQLGTALRAV-FPDAEF--VSRQDLDITSDLSSARPWKQYS--AIINAAAYT 241 Query: 62 AVDKAEDEPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AVDKAE E A+++NA +A A + +++S+DYVFDG + E +P +P Sbjct: 242 AVDKAEGEGRADAWAVNATAVANLAAVARENNLTLVHVSSDYVFDGTAPGEYTEDAPLSP 301 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++K AG+ +YV+ RT+WV G NF+ +M L SVV DQ G Sbjct: 302 LGVYGQTKAAGDLAATGAPQHYVV-RTSWVIGD-GGNFVRTMKSLDARGITPSVVDDQIG 359 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 + IA I +L++ + G +++T G P SWAD A IF + A G Sbjct: 360 RLSFTQDIAAGI----KHLLDTR--AAYGTYNLTNSGEPASWADVARMIFRDPAAVTGVS 413 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 + Y + KQ A RP S LD KL T Sbjct: 414 TAEYFV-DKQ--GAAPRPLNSRLDLGKLTAT 441 >gi|311896578|dbj|BAJ28986.1| putative dTDP-4-keto-L-rhamnose reductase [Kitasatospora setae KM-6054] Length = 304 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 15/291 (5%) Query: 2 KCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L + +E + R ++D+ P A DV++N AA+ Sbjct: 11 RWLVTGAAGMLGRDVLRVLAGAGLEATALTRAELDVTDPD--AVLAAVRGHDVVVNCAAW 68 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE + A ++N G +A A + G +++STDYVF G P E +PT P Sbjct: 69 TNVDGAETDEAAATAVNGTGVRHLAAACAATGARLVHVSTDYVFPGDGTEPYAEDAPTAP 128 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG+SKLAGE V ++RTAW+Y G+NF+ +MLRL +R + VV DQ Sbjct: 129 VNAYGRSKLAGELAVLELLPETGHVVRTAWLYGAGGNNFVATMLRLGAQRDTLDVVDDQH 188 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + N + G++H TA G +W A E+ GG Sbjct: 189 GQPTWTYALAERLVALGRNRQAPA-----GVYHGTAS-GRTTWCGLAR----EAYRLGGL 238 Query: 240 YSKVYRIFTK-QYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + R T + A RPA+S L ++ A + W+E + L + Sbjct: 239 DPERIRPTTSAAFVRPAVRPAFSVLGHARWAEAGLAPLPDWREQLAQALTD 289 >gi|255018974|ref|ZP_05291100.1| hypothetical protein LmonF_16746 [Listeria monocytogenes FSL F2-515] Length = 200 Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 20/215 (9%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G I++AA+ +G +YISTDYVFDG + TNPLN YG +KLAG Sbjct: 3 VNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAG 62 Query: 132 EEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIA-- 189 E+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ G PT +A Sbjct: 63 EKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADF 122 Query: 190 -RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT 248 R +I++ GI+ ++ G +W +FA I + P + + Sbjct: 123 IRFVIEM---------NPAYGIYQF-SNSGTATWFEFATEILKDKDVTVNPCT------S 166 Query: 249 KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++P KA RP S + K+ I TW++ + Sbjct: 167 DEFPQKAERPKTSIMSLEKVEKL-GFNIPTWQDAL 200 >gi|227549713|ref|ZP_03979762.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] gi|227078209|gb|EEI16172.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] Length = 440 Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 25/276 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP--KDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ ++L + + E R + D+ P +D+ + IIN AA Sbjct: 166 KILVTGANGQLGRALRKV-YSEREAEFCTRAEFDITHPPARDWNEY------RAIINCAA 218 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y V+ AE E A+++NA+ +A+ A + +++S+DYVFDGL+ ++ P+ Sbjct: 219 YNDVNGAETERGTAWAVNADAVAELARIASEHDLTLVHVSSDYVFDGLNTEHTEDELPS- 277 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG SK AGE + +YVI RT+WV+ G+NF+ +M RLA + SVV DQ Sbjct: 278 PLSAYGASKSAGETAARATPRHYVI-RTSWVFGE-GANFMDTMARLADKGVSPSVVADQR 335 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A IAH L S + G++++T+DG V + A +F G Sbjct: 336 GRPTHADDLAHG---IAHLL---STKAEYGVYNITSDGDAVGRDEIAMSVF---IGVGAD 386 Query: 240 YSKVYRIFTKQYPT----KAHRPAYSCLDCSKLANT 271 S V + T QY +A RP S L K+ T Sbjct: 387 PSDVTPVTTAQYAELNGPEAPRPKESTLSLDKIKGT 422 >gi|160942044|ref|ZP_02089359.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC BAA-613] gi|158434935|gb|EDP12702.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC BAA-613] Length = 303 Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 82/281 (29%), Positives = 139/281 (49%), Gaps = 14/281 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 +K + G G++ + ++ + + VE++ +D+ + + P I+N A Sbjct: 8 LKIWICGAGGRVGRKMTDILASRPVELLLTDADSVDITDSEAVMEYAHINRPHYIVNCAG 67 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T ED PE A+ +NA GA ++ AA + +STD VFDG S P EF P + Sbjct: 68 LTDAAACEDCPEEAYRVNALGARNLSVAARMGKSRLVQMSTDDVFDGRSLVPYTEFDPVS 127 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YGKSK+AGE V + N ++I+R++W++ GS +L +L +A + + I DQ Sbjct: 128 PRTVYGKSKMAGENFVREFCNRHIIVRSSWIFG-DGSPYLERILEMAGQGKTIRAASDQM 186 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT A +A II+ L+E+ + G++H+T G S + A+ E+ G Sbjct: 187 ASPTGADGLAAKIIE----LMEHGED---GLYHVTGQ-GCCSRYELAK----EAVRLAGY 234 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V + + + RP+YS LD L ++ + WK Sbjct: 235 QVPVEPVNASEDTLSSMRPSYSVLDNMMLRISNMRLLPHWK 275 >gi|289704883|ref|ZP_06501300.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58] gi|289558379|gb|EFD51653.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58] Length = 471 Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 93/279 (33%), Positives = 137/279 (49%), Gaps = 29/279 (10%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFA-SFFLSFSPDVIINPAAYT 61 LV+G GQ+ ++L + + GR D+ P + F ++N +A T Sbjct: 190 LVLGAGGQLGRALVVRAEAAGIPVEAHGRDTWDMTDPASWPREHFRGLR--AVVNASAMT 247 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDE 114 AVD AE PE A+++NA +A+ G+P ++STDYVFDG P+D Sbjct: 248 AVDAAE-TPEGRAQAWAVNATAVAELARRCTEAGVPLAHVSTDYVFDGALPVGREHPVDH 306 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P PL +YG+SK AGE V + ++ I+RT+WV G NF+ +M LA+ + +V Sbjct: 307 --PLAPLGVYGQSKAAGEAAVRTVPRHW-IVRTSWVIG-EGKNFVATMASLAERGIDPAV 362 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G T A +A A++ H + ++ T G FHMT G V+W D A ++F ++ Sbjct: 363 VADQHGRLTFADDLADALL---HLVTTDAPT---GTFHMTNSGDVVTWHDVARWVFEDTG 416 Query: 235 ERGGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLA 269 G +V T Y A RP S LD LA Sbjct: 417 HDAG---RVSATTTAGYLAGKEGVAPRPTNSALDLGPLA 452 >gi|84489910|ref|YP_448142.1| dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM 3091] gi|84373229|gb|ABC57499.1| predicted dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM 3091] Length = 286 Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 26/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 MK + G +G + + L+++ D EI+ + D+ + PD Sbjct: 1 MKFFITGGSGLLGERLATIASNDDEIVLSHNSNPTKNTIKCDITDKNEVEKVINKNKPDT 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA T VD EDE +IA+ IN++G +A+AA++IG IY+STD+VFDG + Sbjct: 61 IVHCAAMTDVDLCEDEIDIAYRINSDGTRNMAQAAENIGAKIIYVSTDFVFDG-DKGYYS 119 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREI 172 E NPL IY KSK GE ++ Y+ N+ I R + +Y +NF ++ + I Sbjct: 120 EDDEVNPLGIYAKSKYDGEVQLKKYSTNWAIARVSVLYGWHKKANFTTWVINQLRSNNSI 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--- 229 ++V DQ +PT A AI +IA GI+H TA ++ DF + I Sbjct: 180 NIVTDQINSPTYADNAGEAIFEIAK-------QDKNGIYH-TAGNDRINRFDFTQKIAEA 231 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 F + + P + + ++ KA RP S L+ +K+ + T E + + Sbjct: 232 FNLNKDLINPTT------SDKFIQKAPRPRDSSLNVNKIKKELGFTMETCSESLERM 282 >gi|325109034|ref|YP_004270102.1| dTDP-4-dehydrorhamnose reductase [Planctomyces brasiliensis DSM 5305] gi|324969302|gb|ADY60080.1| dTDP-4-dehydrorhamnose reductase [Planctomyces brasiliensis DSM 5305] Length = 283 Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 20/288 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ +L + Q I +GR ++++ + A P IIN A+ V Sbjct: 5 LILGVRGQLGTALHARMPQ---AIGLGRAELNVDDLDNLAHTLDEHQPQQIINCTAWNQV 61 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---RTPIDEFSPTNP 120 D AE E AF NA A+A+ +++STDYVF G + R ++ P P Sbjct: 62 DLAETETAAAFHTNALVPRALARYCQQRECRLVHVSTDYVFGGNANPGRGWTEDDRPI-P 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 ++YG SKLAGE V + ++RT +Y G+ NF+ +ML+LA+ R + VV DQ Sbjct: 121 SSVYGSSKLAGENFVLTECPAAQVIRTCGLYGFGGNGNFVTTMLKLARAGRSLKVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 TPT +A AI L+ +S+ G+FH+T + G SW +FA+ IF Sbjct: 181 CTPTLVEDLAVAI----EALLASSEP---GLFHVT-NRGHSSWFEFAQQIF----SLADV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + +Y A RPA+S LDCS+ + T + + L Sbjct: 229 QADLSPVSSAEYGAAARRPAWSVLDCSRFERVTGQTLPTLDDALGRFL 276 >gi|237739563|ref|ZP_04570044.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 2_1_31] gi|229423171|gb|EEO38218.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 2_1_31] Length = 298 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 90/299 (30%), Positives = 140/299 (46%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + +ID+ DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFKELLDSIGEKYIASDKDEIDITNG-DFLRAYVQTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VD+AE E E+ + +NAE +A A IG I S+D+VF+GL T Sbjct: 62 AAYNYVDRAETEKELCYKLNAEAPATLANIAAEIGANYITYSSDFVFNGLLTSYLYGDTT 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ NN I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKAKYEGELLVSQVMNNPELSSKMYIVRTSWVFGKATMNFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L+KE+ EI V DQ +PT + +A ++ + EN GI+H T DG + + Sbjct: 182 LSKEKNEIKVTDDQISSPTYSKDLAYYSWELLKSSAEN------GIYHFTNDGIASKYEE 235 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + + + A RP +S L C K+ I I WK + Sbjct: 236 -AKYILDKISWQGN----LIAVKREDLGLPAERPKFSKLSCKKIKEKLGITIPDWKNAI 289 >gi|159899116|ref|YP_001545363.1| dTDP-4-dehydrorhamnose reductase [Herpetosiphon aurantiacus ATCC 23779] gi|159892155|gb|ABX05235.1| dTDP-4-dehydrorhamnose reductase [Herpetosiphon aurantiacus ATCC 23779] Length = 282 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 18/223 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G +GQ+ L+ D ++ ++DL + A+ +PD+++ PAA+ Sbjct: 1 MRVLILGASGQLGTELAKT-FADHHLLMPSHQELDLSQATARAAIN-QLTPDLVLLPAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P AF N G A A IP +Y+ST+ VF G S+ E+ P Sbjct: 59 TNVDGCALDPARAFRENTLGPKYAALACRDRDIPLVYVSTNEVFSGSSQQAYSEYDQPAP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERRE----ISV 174 +N YG+SK GE+ V + N I R AW +FG NF+ ++ RL +ER + + V Sbjct: 119 INAYGRSKWGGEQAVLHHAPNVFITRVAW---LFGGQRNFVRTIARLGRERLQTGEPLRV 175 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 V D+ GTPT A + A AI Q+ D++L GI+H+ +G Sbjct: 176 VTDEVGTPTHAAEAAWAIRQLV-------DSNLPGIYHVVNEG 211 >gi|113970953|ref|YP_734746.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] gi|113885637|gb|ABI39689.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] Length = 359 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 55/314 (17%) Query: 4 LVIGNNGQIAQSLSSMCVQ-----DVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVII 55 L+ G + Q++++L + + D + RV +D+ + A+ F F PD +I Sbjct: 15 LLTGADSQLSKALLRVLAKAANRFDGRVFRVHALSHAQLDIADKQSVAAAFARFKPDWVI 74 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----------- 104 N AAY AVD+AE E A+ +N+ G +A+ G ++IS+DYVF Sbjct: 75 NCAAYNAVDRAETAAEEAYRVNSLGPELLARECALTGARLVHISSDYVFSGEPAGAAVQA 134 Query: 105 -------------DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWV 150 GL+ + E + PL++YG+SKLAGE+ V +++RTAW+ Sbjct: 135 LNQNGLTDSRLIESGLTERGLTESATPAPLSVYGQSKLAGEQAVLCILAERAIVIRTAWL 194 Query: 151 YSIFGSNFLLSMLRLAK---ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 Y + G NF+ +MLRL E + ++V+ DQ G+PT +A I Q+ + + S Sbjct: 195 YGVDGHNFVKTMLRLMATMPEGQPLTVINDQIGSPTWTDALAHLIWQLIASPLNVGCGS- 253 Query: 208 RGIFHMTADGGPVSWADFA-----EYIFWESAERGGPYSKVYRIFTKQYPTK-------- 254 G+FH A G SW +FA + + + ++ P S + + Y K Sbjct: 254 -GLFHY-AGQGQCSWYEFALEIQRQALALKLLDKAVPISAIDSL---SYAAKALEKGNKL 308 Query: 255 AHRPAYSCLDCSKL 268 A RP+YS L+ ++ Sbjct: 309 AARPSYSALNSGRV 322 >gi|212704490|ref|ZP_03312618.1| hypothetical protein DESPIG_02546 [Desulfovibrio piger ATCC 29098] gi|212672057|gb|EEB32540.1| hypothetical protein DESPIG_02546 [Desulfovibrio piger ATCC 29098] Length = 315 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 16/289 (5%) Query: 1 MKCLVI-GNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 +K LV+ G G + Q+L + + + + + R D D+L + S +PDV+ + Sbjct: 30 VKALVLEGRTGLLGQALRHVLLGRGWSVESLERSDGDILDADFLQARLDSCAPDVVFSSL 89 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSP 117 + VD AED P+ N +A + G ++ S+ VF G +P E Sbjct: 90 GWNTVDDAEDHPDEVLLYNRTLPHTLACLLKTRGQGHLVHFSSGLVFSGQHGSPWREEDA 149 Query: 118 TNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YGK++LAGE+ V + ++RT W++ NF+ +L R I++V Sbjct: 150 TAPLNVYGKTRLAGEQAVLQTLPERACVVRTGWLFGPGKRNFVDDILNACHRRDSITIVD 209 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D+ G+PT +L +A I +A + G++H + G +W + A E+ Sbjct: 210 DRTGSPTYSLDLALWSIMLA-------ERQATGLWH-AVNSGQATWCELAC----EAVGL 257 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 G +V I + Q+P KA RP Y+ LDC KL+ + W + +R Sbjct: 258 AGNECRVEPIPSSQWPQKAPRPPYTVLDCGKLSEYLGMHPRPWTQALRE 306 >gi|256846109|ref|ZP_05551567.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_36A2] gi|256719668|gb|EEU33223.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_36A2] Length = 298 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL T Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYSEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T N I+RT+WV+ +NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKTKYEGELLVSQVTENPENTSKIYIVRTSWVFGKGNTNFIDKVIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 +K++ E+ V DQ +PT + +A ++ E+ GI+H T D S D Sbjct: 182 WSKQKDELKVADDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKYD 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R +++ A RP +S L C K+ + I WK+ + Sbjct: 235 QAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|24373221|ref|NP_717264.1| dTDP-4-dehydrorhamnose reductase [Shewanella oneidensis MR-1] gi|24347447|gb|AAN54708.1|AE015611_6 dTDP-4-dehydrorhamnose reductase [Shewanella oneidensis MR-1] Length = 328 Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 29/289 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G + Q+A++L + + + +D+ A F PD +IN AAY Sbjct: 12 LLTGAHSQLAKALIRTHLNGGLVFNLHPLTHAALDISDKYSVAEVFAQVKPDWVINCAAY 71 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 AVDKAE + A+ +N+ G +A G ++IS+DYVF GL + E Sbjct: 72 NAVDKAETAVDEAYRVNSLGPELLATECALTGARLVHISSDYVFSGLLTGVEANALSETV 131 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRL---AKERREI 172 +PL++YGKSKLAGE+ V +++RTAW+Y + G NF+ +MLRL + + + Sbjct: 132 TPSPLSVYGKSKLAGEQAVQRILGERAIVIRTAWLYGVDGHNFVKTMLRLMAATPDAQPL 191 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 V+ DQ G+PT +A I Q L+ ++ G+FH A G SW +FA I + Sbjct: 192 FVIDDQIGSPTWVDALASLIWQ----LMLRGES---GLFHY-AGQGQCSWYEFAAEIQQQ 243 Query: 233 SAERGGPYSKVYRIFTK--QYPTK--------AHRPAYSCLDCSKLANT 271 + V I T Y K A RP+YS L+ +KL +T Sbjct: 244 ALALKLLKKAVPIIATDSLSYAAKALEKGNVLAQRPSYSALNSAKLRDT 292 >gi|326382032|ref|ZP_08203725.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL B-59395] gi|326199458|gb|EGD56639.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL B-59395] Length = 305 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/300 (30%), Positives = 151/300 (50%), Gaps = 20/300 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + ++G GQ+ ++L + D +++ + DID+ +P DV+IN A Sbjct: 4 QQVFIVGAAGQVGRALLA-SRPDRDVVPLTSDDIDIRSDDSVREALAGIAPGDVVINAAG 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-------DGLSR--T 110 YTAVD AE + E A+++NA+G +A + G I++STDY + DG R Sbjct: 63 YTAVDAAESDREAAWAVNADGPANLAAVTGASGARLIHLSTDYAYATTALGDDGAPRPFE 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--IFGSNFLLSMLRLAKE 168 P DE P +YG SKL G+ V++RTAWV++ ++F+ +M+RL E Sbjct: 123 PADET--VEPATVYGASKLEGDRAAQRADPATVVVRTAWVFTGGRGDADFVATMVRLETE 180 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R + VV DQ G+PT A +A+A+ ++ L ++ + + H T + G SW + A Sbjct: 181 RDVVRVVDDQVGSPTYAPDLAKALWELVDRL-DSPALAAGAVVHAT-NAGATSWWELART 238 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +F AE G +V T ++P A RP+YS L + A + +W++ V + L Sbjct: 239 VF---AEVGADPERVQPCTTDEFPRPAPRPSYSVLSGASWAAAGLSPLRSWRDAVHDSLT 295 >gi|284162303|ref|YP_003400926.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631] gi|284012300|gb|ADB58253.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631] Length = 291 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 30/298 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RPDI------DLLKPKDFASFFLSFS 50 MK + G +G + ++ + ++ + G +P+ DL P Sbjct: 1 MKVFITGGSGLLGSKVAEIALERGYNVYSGYNSHKPEFGEPVKFDLADPNSIVKVIDDVR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVII+ AA T VD+ E E E+A+ IN EG +A+ A +G +YISTDYVFDG R Sbjct: 61 PDVIIHSAALTDVDRCETEKELAYKINVEGTKIVAEMARKLGAFLVYISTDYVFDG-ERG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLSMLRLA 166 E TNP+N YG +KL GE+ Y ++ I RT +Y +NF L ++ Sbjct: 120 MYKEEDETNPINYYGYTKLLGEK----YCQDFCIARTCVIYGARPASGKANFALWLINKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 ++ + ++ DQF TPT +A+ +++IA + L+ +FH+ A VS +FA Sbjct: 176 EKGECVKIITDQFITPTLNTNLAKMLLEIA-------ERGLKEVFHL-AGITRVSRFEFA 227 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + I + E G S + + A RP S LD SK A N + K+ ++ Sbjct: 228 KEI---AREFGLDESLIVPSKMDEMNWIAKRPRDSSLDVSKAARYLNEKPYDLKKALK 282 >gi|254552368|ref|ZP_05142815.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 304 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P A+ + DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSAQWDITDPA--AAERIIRHGDVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFD G P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY+ G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT + +A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTY-------VADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A R +YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWR 279 >gi|15610402|ref|NP_217783.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium tuberculosis H37Rv] gi|15842856|ref|NP_337893.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis CDC1551] gi|148663129|ref|YP_001284652.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis H37Ra] gi|148824468|ref|YP_001289222.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis F11] gi|167967903|ref|ZP_02550180.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis H37Ra] gi|215405279|ref|ZP_03417460.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 02_1987] gi|215413144|ref|ZP_03421845.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|215447571|ref|ZP_03434323.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T85] gi|218755052|ref|ZP_03533848.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|253800309|ref|YP_003033310.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 1435] gi|254233876|ref|ZP_04927201.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis C] gi|254365889|ref|ZP_04981934.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis str. Haarlem] gi|289555544|ref|ZP_06444754.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 605] gi|289747084|ref|ZP_06506462.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis 02_1987] gi|289759407|ref|ZP_06518785.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis T85] gi|289763455|ref|ZP_06522833.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|294993793|ref|ZP_06799484.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis 210] gi|297635920|ref|ZP_06953700.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN 4207] gi|297732917|ref|ZP_06962035.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN R506] gi|298526742|ref|ZP_07014151.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|306777595|ref|ZP_07415932.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu001] gi|306782317|ref|ZP_07420654.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu002] gi|306786139|ref|ZP_07424461.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu003] gi|306790507|ref|ZP_07428829.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu004] gi|306795028|ref|ZP_07433330.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu005] gi|306799226|ref|ZP_07437528.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu006] gi|306805074|ref|ZP_07441742.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu008] gi|306809261|ref|ZP_07445929.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu007] gi|306969363|ref|ZP_07482024.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu009] gi|306973715|ref|ZP_07486376.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu010] gi|307081424|ref|ZP_07490594.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu011] gi|307086028|ref|ZP_07495141.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu012] gi|313660249|ref|ZP_07817129.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN V2475] gi|81671924|sp|P96871|RMLD_MYCTU RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|1877321|emb|CAB07093.1| dTDP-6-DEOXY-L-LYXO-4-HEXULOSE REDUCTASE RMLD (dTDP-RHAMNOSE MODIFICATION PROTEIN) (dTDP-RHAMNOSE BIOSYNTHESIS PROTEIN) (dTDP-RHAMNOSE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|13883186|gb|AAK47707.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis CDC1551] gi|124599405|gb|EAY58509.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis C] gi|134151402|gb|EBA43447.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis str. Haarlem] gi|148507281|gb|ABQ75090.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis H37Ra] gi|148722995|gb|ABR07620.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis F11] gi|253321812|gb|ACT26415.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 1435] gi|289440176|gb|EFD22669.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 605] gi|289687612|gb|EFD55100.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis 02_1987] gi|289710961|gb|EFD74977.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|289714971|gb|EFD78983.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis T85] gi|298496536|gb|EFI31830.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|308214136|gb|EFO73535.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu001] gi|308325067|gb|EFP13918.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu002] gi|308329288|gb|EFP18139.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu003] gi|308333119|gb|EFP21970.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu004] gi|308336806|gb|EFP25657.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu005] gi|308340640|gb|EFP29491.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu006] gi|308344373|gb|EFP33224.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu007] gi|308348377|gb|EFP37228.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu008] gi|308353214|gb|EFP42065.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu009] gi|308356954|gb|EFP45805.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu010] gi|308360955|gb|EFP49806.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu011] gi|308364495|gb|EFP53346.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu012] gi|323718135|gb|EGB27317.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CDC1551A] gi|326902506|gb|EGE49439.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis W-148] gi|328460043|gb|AEB05466.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 4207] Length = 304 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P A+ + DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPA--AAERIIRHGDVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFD G P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY+ G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT + +A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTY-------VADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A R +YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWR 279 >gi|23335975|ref|ZP_00121205.1| COG1091: dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum DJO10A] gi|189440431|ref|YP_001955512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum DJO10A] gi|189428866|gb|ACD99014.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum DJO10A] Length = 483 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 38/303 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ ++ + ++ E + + D PK + ++ S IIN Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDID--EFDFSDPKAYEAYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPID 113 AYTAVDKAE + IA+ NA+G +AK A I +++S+DYVFDG ++ T + Sbjct: 248 GAYTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKEHTETE 307 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------A 166 F+ PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L A Sbjct: 308 AFA---PLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GHNFVKTMMMLSNKVADPA 362 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQ+G T +A AI + + G +++T G SWAD A Sbjct: 363 DKLEQVTVVDDQYGRLTFTRDMAEAIFHLL------DSHAPYGTYNLTGSGAVKSWADIA 416 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 +F + G SKV I T +Y A RP S LD +K+ + + W+E Sbjct: 417 AEVFDLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEAGYVP-ADWEE 472 Query: 282 GVR 284 ++ Sbjct: 473 TLK 475 >gi|170516928|gb|ACB15402.1| RmlCD [Bifidobacterium longum] Length = 483 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 38/303 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ ++ + ++ E + + D PK + ++ S IIN Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDID--EFDFSDPKAYEAYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPID 113 AYTAVDKAE + IA+ NA+G +AK A I +++S+DYVFDG ++ T + Sbjct: 248 GAYTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKEHTETE 307 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------A 166 F+ PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L A Sbjct: 308 AFA---PLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GHNFVKTMMMLSNKVADPA 362 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQ+G T +A AI + + G +++T G SWAD A Sbjct: 363 DKLEQVTVVDDQYGRLTFTKDMAEAIFHLL------DSHAPYGTYNLTGSGAVKSWADIA 416 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 +F + G SKV I T +Y A RP S LD +K+ + + W+E Sbjct: 417 AEVFDLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEAGYVP-ADWEE 472 Query: 282 GVR 284 ++ Sbjct: 473 TLK 475 >gi|328478998|gb|EGF48488.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus MTCC 5462] Length = 186 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 14/193 (7%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 +YISTDY+FDG S+ P N YG++K GE++V Y Y I+RT+WV+ + Sbjct: 4 LVYISTDYIFDGDSKEIYTVNDQPAPRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEY 63 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G NF +ML LAK +E++VV DQ+G P+ +A + ++ GI+H++ Sbjct: 64 GHNFAYTMLNLAKTHKELTVVDDQYGRPSWTKTLAEFMTFAVDQHLD------YGIYHLS 117 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 D +W +FA I + P S + +YP KA RP +S LD SK T Sbjct: 118 NDNS-CNWYEFASAILADKDVTVKPVS------SAEYPQKAWRPRHSILDLSKTKAT-GF 169 Query: 275 RISTWKEGVRNIL 287 I TW++ +++ L Sbjct: 170 EIPTWQDALKDFL 182 >gi|34762799|ref|ZP_00143786.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887550|gb|EAA24633.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 297 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL T Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T+ I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKGNINFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S D Sbjct: 182 WSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKYD 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ + Sbjct: 235 QAKYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|262066766|ref|ZP_06026378.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium periodonticum ATCC 33693] gi|291379569|gb|EFE87087.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium periodonticum ATCC 33693] Length = 298 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + ++D+ K DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFRELLDSIGEKYIASDKDEVDITKA-DFLRAYVQTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-------RT 110 A Y VD AE E E+ + +NAE +A A IG I STD+VF+GL+ T Sbjct: 62 AGYNDVDMAETEKELCYKLNAEAPANLANIAAEIGADYITYSTDFVFNGLTTNYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE + T+ I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEAHPLSTYAKAKYEGELLILQVIENPEITSKIYIVRTSWVFGKASMNFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LAKE+ E+ VV DQ +PT + +A ++ N E+ GI+H T DG + + Sbjct: 182 LAKEKDELKVVDDQVSSPTYSKDLAYYSWELLKNSCES------GIYHFTNDGIASKYEE 235 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+Y+ + + +G + + + A RP +S L C K+ I I WK+ + Sbjct: 236 -AKYVLDKISWQGN----LIAVKREDLGLLAERPKFSKLSCKKIKEKLGITIPNWKDAI 289 >gi|297625251|ref|YP_003687014.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921016|emb|CBL55554.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 494 Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 145/278 (52%), Gaps = 23/278 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF--FLSFSPDVIINPAA 59 + LV G +GQ+ ++L + + D + VG D+D L D AS + + DVI+N AA Sbjct: 199 RVLVTGAHGQLGRALMAQ-LPDAGFLPVGV-DLDKLNIADRASVDAYDWSTVDVIVNAAA 256 Query: 60 YTAVDKAE---DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +T VD AE P A++ NA G +A+ A G+ ++IS++Y FDG +R P E Sbjct: 257 WTDVDGAETAQGRPR-AWAANATGPANLARVATEHGLTLVHISSEYTFDG-TRAPHREDE 314 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PL +YG+SK G+ VA+ +Y++ RT+WV G NF+ +M+ LA VV Sbjct: 315 MPSPLGVYGQSKAGGDAAVAATPRHYLV-RTSWVVGE-GKNFVRTMVDLAGRGIAPKVVD 372 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T +A II + + + G ++++ +G P+SWA A+ +F A Sbjct: 373 DQVGRLTFTTDLAAGIIHLLRH------GAAWGTYNLSNEGTPLSWAAVAKRVF---ALS 423 Query: 237 GGPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 G V I T +Y A RPA S LD +++ T Sbjct: 424 GHDPQDVSPISTAEYFAGKDAAPRPADSTLDLTRIEAT 461 >gi|294783374|ref|ZP_06748698.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 1_1_41FAA] gi|294480252|gb|EFG28029.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 1_1_41FAA] Length = 297 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NG++ + E I + +ID+ DF ++ ++ D IIN Sbjct: 3 LIFGANGKLGTDFKELLDSIGEKYIASDKDEIDITNG-DFLRAYVQTMHQNYKVDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VD+AE E E+ + +NAE +A A IG I S+D+VF+GL T Sbjct: 62 AAYNYVDRAETEKELCYKLNAEAPATLANIAAEIGANYITYSSDFVFNGLLTSYLYGDTT 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T+ I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKAKYEGELLVSQVIENPEITSKIFIVRTSWVFGKASMNFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L+KE+ E+ VV DQ +PT + +A ++ + EN GI+H T DG + + Sbjct: 182 LSKEKDELKVVDDQVSSPTYSKDLAYYSWELLKSSAEN------GIYHFTNDGIASKYEE 235 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + + + A RP +S L C K+ I I WK+ + Sbjct: 236 -AKYILDKISWQGN----LIAVKREDLGLPAERPKFSKLSCKKIKEKLGITIPDWKDAI 289 >gi|227505632|ref|ZP_03935681.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227197785|gb|EEI77833.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 447 Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 92/271 (33%), Positives = 144/271 (53%), Gaps = 20/271 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + + E R D D+ P + + +S IIN AAY Sbjct: 175 KVLVTGANGQLGRALRQV-LPHAEF--CAREDFDICNPPE--RHWRHYS--TIINCAAYN 227 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE + A+ +NA +A+ A + +++S+DY+FDG + +E +P+ PL Sbjct: 228 DVNGAESDRARAWEVNALAPAKLARIAVGNNLTLVHVSSDYIFDGSQKIHTEEETPS-PL 286 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK AGE AS + I+RT+WV+ G+NF+ +M RLAK+ E V+ DQ G Sbjct: 287 SLYGASKAAGEAS-ASVAPKHYIVRTSWVFGD-GNNFVKTMARLAKQGVEPKVIHDQHGR 344 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ IAH L + GI+++++ G V + A F G S Sbjct: 345 PTFAEDLAKG---IAHLLKVQAPY---GIYNISSGGDSVGRDEIAMATF---IGLGHDPS 395 Query: 242 KVYRIFTKQYPTK-AHRPAYSCLDCSKLANT 271 +V+ + ++Y + A RP S LD SK+ T Sbjct: 396 EVHPVSAEEYGDEPAQRPLESTLDLSKIEAT 426 >gi|225020236|ref|ZP_03709428.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii ATCC 33806] gi|224946980|gb|EEG28189.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii ATCC 33806] Length = 505 Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 16/232 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD---VIINPA 58 K L+ G +GQ+ ++L++ Q + D DL D+ + + + D VIIN A Sbjct: 192 KILITGADGQVGRALAT---QFPDATLCNHSDFDLTA--DYQALEDAVNWDEYAVIINAA 246 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE + +++NA G +A+ A + + ++ STDYVF G + DE +P Sbjct: 247 AYTAVDHAEMDRARCWAVNAAGPAKLARLATNHDLTVVHFSTDYVFSGDAPGDQDETTPI 306 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG SK AG+ +A T +Y I+RT+WV G NF+ +M+RLA+ +VV DQ Sbjct: 307 APSNFYGASKAAGDAAIALTTKHY-IVRTSWVVGD-GKNFVTTMVRLAQSGAHPAVVNDQ 364 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 G T + IA+A AH L + G++ + G P SWA A +F Sbjct: 365 VGRLTFSTDIAQA---TAHLL---AGEHPYGVYGFSNSGQPQSWAQIARRVF 410 >gi|5902171|gb|AAD55455.1| 4-ketoreductase [Streptomyces antibioticus] Length = 295 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 18/295 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G + + L ++ E + +G +D+ +P + P +++N AA Sbjct: 1 MRWLITGAAGMLGRELVRRLAENEEDVAALGHDHLDVTRPSAVRAALAEHRPGIVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIA---KAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVD AE + A +NAE +A + G+ +++STDYVF G +RTP E Sbjct: 61 YTAVDDAETDEAAAALLNAEAPRLLAEGLRPHRRHGL--VHLSTDYVFPGDARTPYAEDH 118 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P + YG++K GE+ V + +LRTAW+Y G +F+ +M+ I VV Sbjct: 119 PTAPRSAYGRTKRDGEQAVLTALPTATVLRTAWLYGRTGRSFVRTMIEREARGGAIDVVA 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF-WESAE 235 DQ G PT +A II + + + GI H T + G +W D A+ +F A+ Sbjct: 179 DQRGQPTWTGDLADRIIAVGRH------PGVHGILHAT-NAGSATWYDLAQEVFRLLDAD 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G F + P RPAYS L + T + W+ +R +I Sbjct: 232 PGRVRPTTGAAFRRPAP----RPAYSVLGHDRWRGTGLAPLRDWRSALREAFPDI 282 >gi|296395056|ref|YP_003659940.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985] gi|296182203|gb|ADG99109.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985] Length = 294 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 27/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + +V G GQ+ + + + ++ + R +D+ D + + P DV++N AA Sbjct: 7 RLVVTGAGGQVGSRVVQIAAEHRYNVVGLSRAQLDIC---DEGAVAETLRPGDVVVNCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---------LSRT 110 T VD AE +PE A INAE G +A+A +G I++STDYVF G L+R Sbjct: 64 QTQVDAAEADPEGAHRINAEAVGNLARACARVGARFIHVSTDYVFAGQEEGWFSARLAR- 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--IFGSNFLLSMLRLAKE 168 P + P+ +YG+SKLAGE + V++RT+WVY+ G +F+ + A+ Sbjct: 123 PYEADDEPRPIQVYGESKLAGERLAFQHNPRSVVVRTSWVYTGERHGRDFVSTAREQAES 182 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + V DQ G+PT + +A ++++A E G+ + GG S D A Sbjct: 183 GSAMRAVTDQVGSPTRCVDLAYGLLELAWQGGEG------GLLQFSNTGG-CSRHDLARA 235 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +F E G V + + A RP YS L + W++ +R+ L Sbjct: 236 VF---EELGADPDLVRPCMSWELERPAARPPYSVLSVASWMQRGLRPPRAWRDALRDAL 291 >gi|294784763|ref|ZP_06750051.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_27] gi|294486477|gb|EFG33839.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_27] Length = 298 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL T Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T+ I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKENINFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S D Sbjct: 182 WSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKYD 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R +++ A RP +S L C K+ + I WK+ + Sbjct: 235 QAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|237742783|ref|ZP_04573264.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 4_1_13] gi|229430431|gb|EEO40643.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 4_1_13] Length = 298 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 31/299 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFL-----SFSPDVIINP 57 L+ G NGQ+ + E I + ++D+ DF ++ ++ D IIN Sbjct: 3 LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNG-DFLRAYIKTMHQNYKIDTIINC 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-------SRT 110 AAY VDKAE E E+ + +NAE +A A IG I STD+VF+GL T Sbjct: 62 AAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNEST 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY------TNNYVILRTAWVYSIFGSNFLLSMLR 164 E +PL+ Y K+K GE V+ T+ I+RT+WV+ NF+ ++ Sbjct: 122 GYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKGNINFVDKIIE 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 +K++ E+ VV DQ +PT + +A ++ E+ GI+H T D S D Sbjct: 182 WSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCES------GIYHFTND-DIASKYD 234 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A+YI + + +G + R +++ A RP +S L C K+ + I WK+ + Sbjct: 235 QAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDAI 289 >gi|305679681|ref|ZP_07402491.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium matruchotii ATCC 14266] gi|305660301|gb|EFM49798.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium matruchotii ATCC 14266] Length = 482 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 16/232 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD---VIINPA 58 K L+ G +GQ+ ++L++ Q + D DL D+ + + + D VIIN A Sbjct: 169 KILITGADGQVGRALAT---QFPDATLCNHSDFDLTA--DYQALEDAVNWDEYAVIINAA 223 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE + +++NA G +A+ A + + ++ STDYVF G + DE +P Sbjct: 224 AYTAVDHAEMDRARCWAVNAAGPAKLARLATNHDLTVVHFSTDYVFSGDAPGDQDETTPI 283 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG SK AG+ +A T +Y I+RT+WV G NF+ +M+RLA+ +VV DQ Sbjct: 284 APSNFYGASKAAGDAVIALTTKHY-IVRTSWVVGD-GKNFVTTMVRLAQSGAHPAVVNDQ 341 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 G T + IA+A AH L + G++ + G P SWA A +F Sbjct: 342 VGRLTFSTDIAQA---TAHLL---AGEHPYGVYGFSNSGQPQSWAQIARRVF 387 >gi|317482685|ref|ZP_07941699.1| RmlD substrate binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322690053|ref|YP_004209787.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. infantis 157F] gi|291516583|emb|CBK70199.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum subsp. longum F8] gi|316915931|gb|EFV37339.1| RmlD substrate binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320461389|dbj|BAJ72009.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. infantis 157F] Length = 483 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 151/301 (50%), Gaps = 34/301 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ ++ + ++ E + + D PK + ++ S IIN Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDID--EFDFSDPKAYEAYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE + IA+ NA+G +AK A I +++S+DYVFDG ++ + E Sbjct: 248 GAYTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKEHM-ET 306 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-------E 168 PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L+ + Sbjct: 307 EAFAPLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GHNFVKTMMMLSNKVADPDDK 364 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +++VV DQ+G T +A AI + + G +++T G SWAD A Sbjct: 365 LEQVTVVDDQYGRLTFTKDMAEAIFHLL------DSHAPYGTYNLTGSGAVKSWADIAAE 418 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F + A G SKV I T +Y A RP S LD +K+ + + W+E + Sbjct: 419 VF-DLANGNG--SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEAGYVP-ADWEETL 474 Query: 284 R 284 + Sbjct: 475 K 475 >gi|291457003|ref|ZP_06596393.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium breve DSM 20213] gi|291381414|gb|EFE88932.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium breve DSM 20213] Length = 483 Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 151/303 (49%), Gaps = 38/303 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ ++ + ++ E + + D PK + ++ S IIN Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDID--EFDFSDPKAYEAYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPID 113 AYTAVDKAE + IA+ NA+G +AK A I +++S+DYVFDG ++ T + Sbjct: 248 GAYTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKEHTETE 307 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------A 166 F+ PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L A Sbjct: 308 AFA---PLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GRNFVKTMMMLSNKVADPA 362 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQ+G T +A AI + + G +++T G SWAD A Sbjct: 363 DKLNQVTVVDDQYGRLTFTRDMAEAIFHLL------DSHAPYGTYNLTGSGAVKSWADIA 416 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 +F + G SKV I T +Y A RP S LD +K+ + W+E Sbjct: 417 AEVFDLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEA-GYAPADWEE 472 Query: 282 GVR 284 ++ Sbjct: 473 TLK 475 >gi|139439925|ref|ZP_01773277.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC 25986] gi|133774775|gb|EBA38595.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC 25986] Length = 484 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 37/300 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC-----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 + LV G NGQ+ ++ ++ +D + + D+ P +A + S +IN Sbjct: 193 RTLVTGCNGQLGHAVRALAEERGVAKDFDFCDIDT--FDMSDPDAYAQYDWSLY-GTVIN 249 Query: 57 PAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 AYTAVDKAE PE A+ NA G +A+ GI +++S+DYVFDG + + Sbjct: 250 CGAYTAVDKAE-APEGRVTAWKANATGPALLARTCAGHGITLVHVSSDYVFDGTAEVHTE 308 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE----- 168 + P +PL++YG++K AG+ VA +Y I+R++WV G NF+ +M L+ Sbjct: 309 D-EPLSPLSVYGQTKAAGDIAVAGCPRHY-IMRSSWVIG-EGHNFVKTMKALSDRVADPE 365 Query: 169 --RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 +++VV DQ G T +ARAI + + G + T G SWAD A Sbjct: 366 DGLTQVTVVDDQLGRLTFTRDMARAIFHVL------GTHAPYGTYDCTGSGAVKSWADIA 419 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 +F E+A G KV + T Y A RP +S LD S+L + + W+E Sbjct: 420 RAVF-EAANGNG--DKVVPVSTADYYGGAEGPVAPRPVHSALDLSRLESV-GFHMPDWEE 475 >gi|329944287|ref|ZP_08292546.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 170 str. F0386] gi|328531017|gb|EGF57873.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 170 str. F0386] Length = 311 Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 94/280 (33%), Positives = 150/280 (53%), Gaps = 26/280 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++L ++ Q V + G P++D+ +++ S S DV+IN AA Sbjct: 28 RVLVTGANGQLGRALMTLLPQ-VGFVPTGVDLPEVDISDAAAMSAWDWS-SYDVVINAAA 85 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG + + Sbjct: 86 WTNVDGAE-TPEGRRLSWRANTVGPVNLARAAVQHGLTLVHLSTEYTFDGAIPVHSEAET 144 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P+ PL +YG+SK AG+ V+ +Y++ RT+WV G NF+ +ML LA+ +VV Sbjct: 145 PS-PLGVYGQSKAAGDAAVSVCPRHYLV-RTSWVVG-DGKNFVKTMLSLAERGIAPTVVA 201 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T A +A II + + E G ++++ G VSWAD A+ ++ ER Sbjct: 202 DQTGRLTFASDLAAGIIHLLTSGAEF------GTYNLSGGGPVVSWADVAKRVY----ER 251 Query: 237 GGPY-SKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 G +V + T++Y A RP S LD +K+ T Sbjct: 252 AGHSPDEVTPVTTEEYYAGQEGIAPRPLSSVLDLAKIKAT 291 >gi|264680362|ref|YP_003280272.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262210878|gb|ACY34976.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 191 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 11/183 (6%) Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER +S Sbjct: 13 EGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREALS 72 Query: 174 VVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 V+ DQ+G PT A IA + H + D G++H+ A G +W +A ++ E Sbjct: 73 VINDQWGAPTGADLIADVTAHAVRHMSAHDGDG---GLYHLVA-AGETNWHAYASHVI-E 127 Query: 233 SAERGGP-----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A+ P + + T +PT A RP S LD KL T + + W++GV +L Sbjct: 128 RAQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERML 187 Query: 288 VNI 290 I Sbjct: 188 REI 190 >gi|154507643|ref|ZP_02043285.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC 17982] gi|153797277|gb|EDN79697.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC 17982] Length = 475 Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 91/274 (33%), Positives = 141/274 (51%), Gaps = 21/274 (7%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L ++ + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMRALPEAGFTVTGVDLPEVSISNAEQVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE + N+ G +A+ A + G ++IST+YVFDG +++ +P Sbjct: 252 TNVDGAE-TPEGRRATWQANSTGPAILAREATAHGATMVHISTEYVFDGTQDVHVEDEAP 310 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + PL YG+SK G+ VAS +Y I+RT+WV G NFL +M+ LA + SVV D Sbjct: 311 S-PLGAYGQSKAGGDAAVASTPKHY-IVRTSWVVGD-GKNFLKTMVSLADQGTSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A+ II + SD G ++++ +G +SWA A+ +F E R Sbjct: 368 QVGRLTFTSDLAKGIIHLL-----TSDAPF-GTYNLSGEGPVMSWAQIAKRVF-ELCGRN 420 Query: 238 GPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKL 268 V + T++Y A RP S LD +K+ Sbjct: 421 --PEDVTEVTTEEYFAGREVAPRPLSSVLDLTKI 452 >gi|293189321|ref|ZP_06608044.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces odontolyticus F0309] gi|292821784|gb|EFF80720.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces odontolyticus F0309] Length = 475 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/274 (33%), Positives = 141/274 (51%), Gaps = 21/274 (7%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L ++ + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMRALPEAGFTVTGVDLPEVSISDAERVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE + N+ G +A+ A + G ++IST+YVFDG I++ +P Sbjct: 252 TNVDGAE-TPEGRRATWQANSTGPAILAREATAHGATMVHISTEYVFDGTQDVHIEDEAP 310 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + PL YG+SK G+ VAS +Y I+RT+WV G NFL +M+ LA + SVV D Sbjct: 311 S-PLGAYGQSKAGGDAAVASTPKHY-IVRTSWVVGD-GKNFLKTMVSLADQGTSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A+ II + SD G ++++ +G +SWA A+ +F E R Sbjct: 368 QVGRLTFTSDLAKGIIHLL-----TSDAPF-GTYNLSGEGPVMSWAQIAKRVF-ELCGRN 420 Query: 238 GPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKL 268 V + T++Y A RP S LD +K+ Sbjct: 421 --PEDVTEVTTEEYFAGREVAPRPLSSVLDLTKI 452 >gi|325265267|ref|ZP_08131992.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] gi|324029446|gb|EGB90736.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] Length = 293 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 112/230 (48%), Gaps = 9/230 (3%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G G++ + M ++DVE++ ++D+ + F P+ IIN A Sbjct: 7 KIWVAGAAGRVGTMIHDMLDMRDVELLETDVEELDITHAAEVNLFGSRNRPNTIINCAGM 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V + E E A+ +NA GA ++ A I I ISTD +F EF NP Sbjct: 67 TDVQECEKHIEQAYKVNALGARNLSAIARKIDARIIQISTDDIFWDKRYRSFHEFDVPNP 126 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V ++I+R++WVY + G NF+ S++ AK I D + Sbjct: 127 RTVYGKSKLAGENFVKELAPKHLIIRSSWVYGMEGHNFVNSIIEQAKNGGCIEAAVDDYA 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 PTSA +++R I+++ E GI+H GG S + AE I Sbjct: 187 CPTSAKELSRVILRLIKEEQE-------GIYHAVC-GGSCSRYELAEEIL 228 >gi|224284002|ref|ZP_03647324.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium bifidum NCIMB 41171] gi|313141153|ref|ZP_07803346.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB 41171] gi|313133663|gb|EFR51280.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB 41171] Length = 482 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 32/300 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ ++ + +E D D P + F S IIN A Sbjct: 189 RTMVTGCNGQLGHAIRDYVEEHGLEGFEFNDIDTFDFSDPAQYDRFDWSLY-GTIINAGA 247 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVD+AE PE +A+ NA+G +A+ A I +++S+DYVFDG + DE Sbjct: 248 YTAVDRAE-TPEGRPVAWKANAQGPALLARVAHEHNITLVHVSSDYVFDGTAEEH-DEEE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML----RLAKER--- 169 PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ R+A R Sbjct: 306 AFAPLGVYGQTKAAGDIAVANAPRHY-ILRSSWVIGE-GRNFVKTMMALSDRVADARDGL 363 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E++VV DQ+G T +A AI + + + G + +T G SWAD A + Sbjct: 364 DEVTVVDDQYGRLTFTRDMAEAIFHLLDS------GAPFGTYDLTGSGAVRSWADIARKV 417 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVR 284 F ++ G +V I T +Y A RP +S L +K+ N W+E ++ Sbjct: 418 FDQANGNG---DRVRPISTAEYFANAKAPVSPRPTHSALSLAKIENA-GYHAPDWEETLK 473 >gi|38232977|ref|NP_938744.1| putative bifunctional protein [Corynebacterium diphtheriae NCTC 13129] gi|38199235|emb|CAE48866.1| Putative bifunctional protein [Corynebacterium diphtheriae] Length = 448 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 148/292 (50%), Gaps = 28/292 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP--KDFASFFLSFSPDVIINPAA 59 + L+ G +GQ+ ++L+ + + D E+ D D++ P + + + + IIN AA Sbjct: 176 RILITGAHGQLGRALAEL-LPDAEL--CSHVDFDVVHPPQRSWRQY------EAIINCAA 226 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VD AED+ A+ +NA +A+ A + +++STD++FDG + + +P+ Sbjct: 227 YNNVDAAEDDRARAWEVNAVAPARLAQIATENNLTLVHVSTDFIFDGTTSVHEETEAPS- 285 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SK AG+ A +YV+ RT+WV+ G NF+ +M LA+ +V+ DQ Sbjct: 286 PLSVYGASKAAGDIAAAVTPKHYVV-RTSWVFGQ-GGNFVETMRSLAQRGIRPNVISDQR 343 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A I+ H L ++D G+++++ G V D A +F G Sbjct: 344 GRPTHAADLAAGIV---HLLRSSADY---GVYNLSNSGDVVGRDDLARAVFEHCGVSG-- 395 Query: 240 YSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T +Y A RPA S + K+ T + W++ VR+ L Sbjct: 396 -EAVTSVTTAEYEVHRGPLAKRPAESTFNLDKIVAT-GFQPRPWRDAVRDYL 445 >gi|257067486|ref|YP_003153741.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810] gi|256558304|gb|ACU84151.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810] Length = 479 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 25/257 (9%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPE---IAFSINA 78 DV++ V R +D+ + A+F F+P I+N AA TAVD +E PE A+++N Sbjct: 209 DVDV--VAREHLDIADARSVAAF--DFAPYGTIVNAAACTAVDASE-APEGRRTAWAVNV 263 Query: 79 EGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G G + +AA + +++S+DYVFDG E P +PL +YG++K AG++ VA+ Sbjct: 264 TGVGHLVEAARAHRATLVHVSSDYVFDGTIEV-HGENEPPSPLGVYGQTKAAGDQLVATL 322 Query: 139 TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 ++Y I+RT+WV G NF+ +M LA+ + +VV DQ G T +A A I H Sbjct: 323 PDHY-IVRTSWVIG-EGRNFVATMAALAERGIDPAVVDDQIGRLTFTEDLAAA---IDHL 377 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK---- 254 L+ GI+++T +G P SWA A +F A G +V + T +Y Sbjct: 378 LVARPAP---GIYNVTGEGEPASWAGIAAEVF---ALSGHDPHRVTPVSTAEYYAGKDGI 431 Query: 255 AHRPAYSCLDCSKLANT 271 A RPA+S LD +K+ T Sbjct: 432 APRPAHSTLDLAKIRAT 448 >gi|160874621|ref|YP_001553937.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|160860143|gb|ABX48677.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|315266862|gb|ADT93715.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678] Length = 369 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 132/284 (46%), Gaps = 47/284 (16%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +E+ + R +D+ + A+ F + P +IN AAY AVD AE + A +NA G Sbjct: 64 LELYALSRSQLDITDAANIAAVFDQYRPSWVINCAAYNAVDAAEHDAIEANRVNALGPEL 123 Query: 84 IAKAADSIGIPCIYISTDYVFDG-----------------------LSRTPIDEFSPTNP 120 +A+ G +++S+DYVF G L R P E P Sbjct: 124 LAQQCLLSGARLLHVSSDYVFGGQAVCDVRETGAEQYQNLDSAPNHLPR-PFVELDAPEP 182 Query: 121 LNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L+ YG SKL GE+KV A + I+RT+W+Y G NF+ +ML L + + + V+ DQ Sbjct: 183 LSAYGTSKLLGEQKVLAVLGEDATIVRTSWLYGQDGHNFVQTMLNLMRTQPSLEVIVDQI 242 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PT + +A+ I Q+ G+FH +A G SW +FA I ++ Sbjct: 243 GCPTWSDALAKVIWQLVMQ-------QCSGVFHYSAQGQ-CSWYEFACEIQRQALALNLL 294 Query: 238 ------GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 P + + + KQ + A RP+YS LD +K+ +T Sbjct: 295 SQPVVIQPITSAH--YAKQALNRGMSLAKRPSYSVLDSAKVQST 336 >gi|320531363|ref|ZP_08032334.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 171 str. F0337] gi|320136424|gb|EFW28401.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 171 str. F0337] Length = 311 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 24/277 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAA 59 + L+ G NGQ+ ++L ++ Q E V P++D+ +S+ + S+ + IN AA Sbjct: 27 RVLLTGANGQLGRALMALLPQAGFEPTGVDLPEVDISDAAAMSSWDWASYDIIININAAA 86 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +T VD AE PE +++ N G +A+AA + +++ST+Y FDG++ +E S Sbjct: 87 WTDVDGAE-TPEGRRLSWRANTVGPVNLARAAVQHDLTLVHLSTEYTFDGVTAVHAEEES 145 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P+ PL +YG+SK AG+ V+ +Y++ RT+WV G NF+ +ML LA+ VV Sbjct: 146 PS-PLGVYGQSKAAGDAAVSVCPRHYLV-RTSWVVG-DGKNFVKTMLSLAERGVSPRVVG 202 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T A +A II + + E G ++++ +G VSWAD A+ ++ ER Sbjct: 203 DQTGRLTFASDLAAGIIHLLASGAEF------GTYNLSGEGPIVSWADVAKRVY----ER 252 Query: 237 GGPY-SKVYRIFTKQYPTK----AHRPAYSCLDCSKL 268 G +V + T++Y A RP S LD +++ Sbjct: 253 AGHSPDEVTPVTTEEYYAGQEGIAPRPLSSALDLTRI 289 >gi|219852976|ref|YP_002467408.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c] gi|219547235|gb|ACL17685.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c] Length = 284 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 25/267 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ L+ G G++ + L V + + + + + P +++N AA+ Sbjct: 22 LRTLIFGGTGRLGRVLQCTYPSSVAVGHT----VPITDKEAVRALVERVRPTLVLNAAAW 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E + A +N EG G IA A +G ++ STDYVF G R E P +P Sbjct: 78 TDVDGCEIDQTRALLVNGEGPGYIATACKEVGATLVHFSTDYVFSG-DRMVYYEDDPVSP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG++K GEE+V + ++Y I+RT+ ++ +G NF+ ML+ + +++ ++V+ D+ Sbjct: 137 INVYGRAKALGEERVMAGCHDYRIIRTSRLFGPYGENFVTLMLQRSADKKTVTVINDEVS 196 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A +++ ++ GI+H+T + G SW +FA + + Sbjct: 197 SPTYIPDLA--------SMVPAVISAQPGIYHVT-NSGSCSWYEFAAAVIGNAVP----- 242 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSK 267 + Q +A RP S L CS+ Sbjct: 243 -----VHAAQCRKRAPRPRSSVL-CSR 263 >gi|323357015|ref|YP_004223411.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037] gi|323273386|dbj|BAJ73531.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037] Length = 469 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 21/292 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK-DFASFFLSFSPDVIINPAAY 60 K LV G +GQ+ ++L + + I R D+DL D A + + IIN AAY Sbjct: 191 KILVTGADGQLGRALRAEFGEHPWIEYASRADLDLTSSDLDAARRWRDYR--AIINAAAY 248 Query: 61 TAVDKAED-EPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 T VD AE E + A+ N A+++ A + G+ ++IS+DYVFDG P P Sbjct: 249 TKVDAAETAEGRVEAWKANVTAVAALSRVATAHGVTLVHISSDYVFDGTKDAPYTASDPL 308 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +Y ++K AG+ V+ +Y I+RT+WV G NF+ SM+ LA+ + VV DQ Sbjct: 309 SPLGVYAQTKAAGDAIVSVVPRHY-IVRTSWVVG-EGKNFVRSMVDLAERGIDPRVVNDQ 366 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T A IA +I L+E+ + G+ ++T+ G P +W + A +F + G Sbjct: 367 IGRLTFASDIAASI----RRLLESG--AAYGVHNVTSVGEPAAWHEVAREVFRLT---GH 417 Query: 239 PYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + T +Y + RP S L+ S L T R++ + R+ Sbjct: 418 DPDRVVGVSTDEYHAASTARISPRPRNSVLETSILDVTWQERLAEYLAAARS 469 >gi|219849996|ref|YP_002464429.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] gi|219544255|gb|ACL25993.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] Length = 282 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 21/291 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G NGQ+ ++L + + +++ +G ++L P + +V+I+ AAY Sbjct: 1 MRIAITGANGQLGRALIATLARHHDVVALGHDQLELSDPATVDQI-ANTRAEVVIHAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P +A+ +N G +A I +YIST+ VF G S P E PT P Sbjct: 60 TNVDGCARDPVLAYRVNGLGTRYVALGCRRIDAAMVYISTNEVFAGTSHRPYYEDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERRE--ISVVC 176 +N YG+SKLAGE++V + I+R AW +FG NF+ ++LRLA + +V Sbjct: 120 INPYGQSKLAGEQEVRFLVARHFIVRVAW---LFGGERNFVQTVLRLAANPPNGVLRMVA 176 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D+ G+PT A +A + ++ T G +H D G S +FA I ++ Sbjct: 177 DEIGSPTYAGDVAAGLARLI-------TTDYYGTYHFVND-GICSRYEFAAEILRQA--- 225 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + I + + + P Y+ L + I W+E V + L Sbjct: 226 -GIDTPLLPIRLRDFQRDSTPPPYTPL-ANIAGAALGITFRPWQEAVADYL 274 >gi|301064144|ref|ZP_07204591.1| putative dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] gi|300441764|gb|EFK06082.1| putative dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] Length = 291 Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 12/234 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G G + + Q+ E+I G+ ++D++ F + SPDV++N Sbjct: 1 MKILILGATGGLGSDCRKVLGQEHEVICPGKEEVDVVSWDVVIEAFDTISPDVVLNCVGL 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS--PT 118 T +D E +P IN EG +A+++ +++S +VFDG P F Sbjct: 61 TDLDTCETDPFALRKINVEGPRNLAQSSARFECKIVHVSCAHVFDGRKAMPQPYFEDDAP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISVVC 176 NPL+ YGKSKL E V + NY+I+R+ W+Y I G NF+ S++R A + + Sbjct: 121 NPLSAYGKSKLESETAVRGNSPNYIIIRSNWLYGIHGDNFVKSVVRHAVRGVSAPMQLPD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 DQFG PT ++A I ++ N D RG +H T+ G S + A+Y+ Sbjct: 181 DQFGAPTWNHRLALQIRELL-----NKDG--RGSYHATS-YGYCSLYELAQYVL 226 >gi|331267005|ref|YP_004326635.1| dTDP-rhamnose synthase [Streptococcus oralis Uo5] gi|326683677|emb|CBZ01295.1| dTDP-rhamnose synthase [Streptococcus oralis Uo5] Length = 214 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 16/190 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIG 92 +D+ + F +P ++ + AA+TAVD AEDE E+ F+IN G +AKA++ G Sbjct: 1 MDITNAEMVEEVFAKVNPTLVYHCAAHTAVDVAEDEGKELDFAINITGTENVAKASEKYG 60 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPT----NPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +YI+TDYVFDG + PI + +P YG++K GEE V + T+ + I+RTA Sbjct: 61 TTLVYIATDYVFDG--KKPIGQEWEVDDLPDPQTEYGRTKQMGEELVENLTSQHYIIRTA 118 Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 WV FG NF+ +M L++ + ++VV DQ G PT R +++ L +N Sbjct: 119 WV---FGKNFVFTMQSLSQTHKTLTVVNDQHGRPT----WTRTLVEFMTYLTDNQ--KEY 169 Query: 209 GIFHMTADGG 218 G +H++ D Sbjct: 170 GYYHLSNDAA 179 >gi|302379941|ref|ZP_07268420.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna ACS-171-V-Col3] gi|302312167|gb|EFK94169.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna ACS-171-V-Col3] Length = 281 Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 80/280 (28%), Positives = 147/280 (52%), Gaps = 18/280 (6%) Query: 7 GNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G +G+I + L ++D E++ + +D++ + + F P+VIIN +A T Sbjct: 10 GADGKIGKVLQKYLDPLED-EVLATDKDIVDIVNSDETSIFARRNRPNVIINCSALTDPV 68 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P +Y Sbjct: 69 ACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHPTTMY 128 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 GKSKL GE V ++ + ILRT+W++S + +++ A++ ++ V Q+ +PTS Sbjct: 129 GKSKLMGENFVREFSVKHFILRTSWLFSPVNHR-VEDIIKEAQQTGKVLVPKAQYSSPTS 187 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 A Q+A I+++ DT GI+H + + G S +FAE I + G ++V Sbjct: 188 AYQLAEFIVKLM-------DTYDYGIYHASCE-GVASRKEFAEEIL----KIKGIDAEV- 234 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I + + HRP ++ L+ L + + + W+ ++ Sbjct: 235 -IEDENLRVEGHRPDFTALENFLLNTSQIYKFTDWQTSLK 273 >gi|22255844|gb|AAM94769.1| CalS2 [Micromonospora echinospora] Length = 307 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 97/181 (53%), Gaps = 6/181 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV++N AA+T VD AE + A +N G +A+A G I++S+DYVF G + P Sbjct: 56 DVVVNAAAWTDVDGAESDEAGATEVNGAGPANLARACARTGALLIHLSSDYVFSGETTVP 115 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 E +P PLN YG+SKLAGE V YV+ RT W+Y G NF+ ++LR A E Sbjct: 116 WPEDAPPAPLNAYGRSKLAGERAVRGLLPAGGYVV-RTGWLYGRHGPNFVRAVLRRAAET 174 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G PT A +A ++ +A + I+H TA G +W FA + Sbjct: 175 EFVDVVDDQHGQPTWARALAGRLVALAGLAAAGRAPAG--IYHGTA-AGRTTWYGFARTV 231 Query: 230 F 230 F Sbjct: 232 F 232 >gi|227486964|ref|ZP_03917280.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093038|gb|EEI28350.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51867] Length = 287 Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 27/300 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ V+G GQ+ ++ + + ++GR D+DL++ + D + Sbjct: 1 MEIAVLGEGGQLGTAMQ-LTNPGFTLRKLGRRDVDLVQLAAGDRAATRAAKDAVSGIGCV 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPID 113 +N AA T VDK E +PE A ++N G +A+ A+ I++STDYVF G R P+ Sbjct: 60 VNCAARTDVDKQETDPEGADAVNHRG---VARLAELTRARFIHVSTDYVFGSGAPRRPLT 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 T+P +YG SKLAGE+++ + +I RTAW++S +F+ +MLRLA+ Sbjct: 117 PADATDPDTVYGASKLAGEKELIGR-KDTLIARTAWLFSGDRLPSKKDFVSTMLRLARAG 175 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G+PT A +A L E + GI H G +W + A Sbjct: 176 KPARVVDDQAGSPTFAF-------DLATGLWEAVNLEATGIVHAVGR-GQATWYEVACAT 227 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + G V ++++P A RP++S LD S W+ GV + Sbjct: 228 YQAA---GADPDLVQPCTSEEFPQVARRPSWSVLDTSSWELAGFTPFPEWRSGVERAVTG 284 >gi|71901358|ref|ZP_00683452.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] gi|71728857|gb|EAO30994.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] Length = 158 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 13/160 (8%) Query: 1 MKCLVIGNNGQIAQ----SLSSMCVQDVEIIRVGR-PD------IDLLKPKDFASFFLSF 49 M LV G GQI Q SLS V + R GR P+ D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRVV--CAVTRSGRLPNGRGCVQADFGQPETLRPLLDAQ 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG Sbjct: 59 RPVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGT 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 +P P PLNIYG SKLAGE V + +ILRT+W Sbjct: 119 SPYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSW 158 >gi|251771325|gb|EES51906.1| dTDP-4-dehydrorhamnose reductase [Leptospirillum ferrodiazotrophum] Length = 306 Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 25/276 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M +IG+ GQ+ L + + +EI+ + RP+ DL P+ + D++IN Sbjct: 10 MTIGLIGSRGQLGSDLLARAPRSGKHALEIVPLDRPEFDLTHPRSLERIRKARF-DLVIN 68 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPI 112 +AY AVD+AE E F +NA G +A+ G + STDYV G + P Sbjct: 69 TSAYNAVDRAEGEIRECFELNAFLPGELARTCREAGSALFHFSTDYVMSGGINEREQIPY 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAK 167 E S PL++YG SK GE V S ++RT +Y G NF+ +ML+LA+ Sbjct: 129 SEESCPRPLSVYGLSKATGERLVLSSWERATVVRTCGLYGGKGSGQKGGNFVTTMLKLAR 188 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R + V+ D PTS +A + ++ ++E G++H+T + G +W DFA+ Sbjct: 189 AGRPLRVIDDCHVGPTSTWDLAEVLWRM---ILEGHPP---GLYHLT-NAGRTTWYDFAK 241 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 IF + G ++V + ++Y A R YS L Sbjct: 242 KIFALT----GTEAEVTPVSLREYNPPAPRSPYSVL 273 >gi|257387274|ref|YP_003177047.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM 12286] gi|257169581|gb|ACV47340.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM 12286] Length = 296 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 93/311 (29%), Positives = 139/311 (44%), Gaps = 45/311 (14%) Query: 1 MKCLVIGNNGQIAQSL----------------SSMCVQDVEIIRVGRPDIDLLKPKDFAS 44 M+ LV+G NG + ++ S+ D+ + + DL + F Sbjct: 1 MRLLVVGANGLLGSNVVLAGQQRGWDVCGTYHSTQPAFDIPLTQ-----FDLGEHDTFDE 55 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 PDV+IN AA T VD E PE A+ +N G +A D+ G+ I++STDYVF Sbjct: 56 TLAEHDPDVVINCAAMTDVDGCETNPEQAYVLNGNAPGELATDCDANGVDFIHVSTDYVF 115 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS--- 161 DG RTP E + +P +YG+SKL GE+ V +I R ++V+ I S L+ Sbjct: 116 DGTQRTPYSESADPDPAQVYGQSKLVGEQAVHGEVPETLIARLSFVWGIHRSRGDLTGFP 175 Query: 162 -MLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-- 217 +R + E + + DQ+ TPT A Q A ++ +LI T G+FH+ Sbjct: 176 AWIRNRHQSDETVPLFTDQWVTPTRAGQAAETLL----DLIGQDAT---GLFHVACSSCV 228 Query: 218 GPVSWADF-AEYI-FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 P + + AEY+ E G V R A RP YSCL+ + +T Sbjct: 229 SPYEFGEMIAEYVNAGEDLLSEGSIEDVER--------DATRPTYSCLNVEHVESTLGRS 280 Query: 276 ISTWKEGVRNI 286 T +E V + Sbjct: 281 QPTIREDVEAV 291 >gi|227541875|ref|ZP_03971924.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182318|gb|EEI63290.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51866] Length = 287 Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 27/300 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ V+G GQ+ ++ + + ++GR D+DL++ + D + Sbjct: 1 MEIAVLGEGGQLGTAIQ-LTNPGFTLRKLGRRDVDLVQLAAGDRAATRAAKDAVSGIGCV 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPID 113 +N AA T VDK E +PE A ++N G +A+ A+ I++STDYVF G R P+ Sbjct: 60 VNCAARTDVDKQETDPEGADAVNHRG---VARLAELTRARFIHVSTDYVFGSGAPRRPLT 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 T+P +YG SKLAGE+++ + +I RTAW++S +F+ +MLRLA+ Sbjct: 117 PADATDPDTVYGASKLAGEKELIGR-EDTLIARTAWLFSGDRLPSKKDFVSTMLRLARAG 175 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G+PT A +A L E + GI H G +W + A Sbjct: 176 KPARVVDDQAGSPTFAF-------DLATGLWEAVNLEATGIVHAVGR-GQATWYEVACAT 227 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + G V ++++P A RP++S LD S W+ GV + Sbjct: 228 YQAA---GADPDLVQPCTSEEFPQVARRPSWSVLDTSSWELAGFTPFPEWRSGVERAVTG 284 >gi|310286574|ref|YP_003937832.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum S17] gi|309250510|gb|ADO52258.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum S17] Length = 482 Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 32/300 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ ++ + +E D D P + F S IIN A Sbjct: 189 RTMVTGCNGQLGHAIRDYVEEHGLEGFEFNDIDTFDFSDPAQYDRFDWSLY-GTIINAGA 247 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVD+AE PE +A+ NA+G +A+ A I +++S+DYVFDG + DE Sbjct: 248 YTAVDRAE-TPEGRPVAWKANAQGPALLARVAREHNITLVHVSSDYVFDGTAEEH-DEEE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML----RLAKER--- 169 PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ R+A R Sbjct: 306 AFAPLGVYGQTKAAGDIAVANAPRHY-ILRSSWVIGE-GRNFVKTMMALSDRVADARDGL 363 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E++VV DQ+G T +A AI + + + G + +T G SW D A + Sbjct: 364 DEVTVVDDQYGRLTFTRDMAEAIFHLLDS------GAPFGTYDLTGSGAVRSWVDIARKV 417 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVR 284 F ++ G +V I T +Y A RP +S L +K+ N W+E ++ Sbjct: 418 FDQANGNG---DRVRPISTAEYFANAKAPVSPRPTHSALSLAKIENA-GYHAPDWEETLK 473 >gi|296130189|ref|YP_003637439.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas flavigena DSM 20109] gi|296022004|gb|ADG75240.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas flavigena DSM 20109] Length = 287 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 15/283 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V+G+ G + + + ++D E+ R +D+L P A DV++N A Sbjct: 1 MRWVVMGSAGMLGTDVVA-TLRDAGHEVEAHDRATVDILDPDAVARVV--EGADVVVNCA 57 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD AE++ E AF++NA G +A+ A G + +STDYVF G + +P E Sbjct: 58 AWTAVDAAEEQEEAAFAVNATGPQVLARRAREAGARIVQVSTDYVFPGDATSPYGETDLA 117 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++KLAGE V + +++++RTAW+Y G F ++ +R ++VV DQ Sbjct: 118 APRSAYGRTKLAGEWAVRAEAPDHIVVRTAWLYGAGGRCFPRTIAHAMAQRGALTVVADQ 177 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A +++ L++ + G +H TA G SW FA+ A G Sbjct: 178 VGQPTWARDVADLVLR----LVDAGAPA--GTYHGTAS-GQTSWHGFAQEAV---AAAGL 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V I + +Y A RPAYS L L I W+E Sbjct: 228 DRDAVTPISSAEYQAAAPRPAYSVLGHDALVRVGVAPIGDWRE 270 >gi|257063891|ref|YP_003143563.1| dTDP-4-dehydrorhamnose reductase [Slackia heliotrinireducens DSM 20476] gi|256791544|gb|ACV22214.1| dTDP-4-dehydrorhamnose reductase [Slackia heliotrinireducens DSM 20476] Length = 285 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 9/215 (4%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G G++ +S+ D I ++++ +F S+ P+ IIN A D Sbjct: 11 IAGATGRLGRSIEYHLDHDTYSIHTTDRELNVTNLDMVTTFAESYRPEFIINCAGIADKD 70 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--SRTPIDEFSPTNPLN 122 P+ A+ +NA GA +A A+ +G I ISTD VF + P+ EF TNP Sbjct: 71 VCAANPDEAYRVNALGARNLAVASHYLGATIIQISTDDVFRSTKPNSAPLSEFERTNPSF 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YGKSK AGE V +VILR++W+Y+ +FL + AK REI V DQFG+P Sbjct: 131 TYGKSKEAGEVLVRELNPRHVILRSSWIYTARKDDFLRMHIADAKAGREIEVPADQFGSP 190 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 TS+ + ++ I +T G FH++ +G Sbjct: 191 TSSDTFCKVLMSIM-------ETGEYGTFHLSCEG 218 >gi|257126877|ref|YP_003164991.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia buccalis C-1013-b] gi|257050816|gb|ACV40000.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia buccalis C-1013-b] Length = 284 Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 19/291 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDV-IINPA 58 MK L+ G+NGQ+ + + +E I ++D+ K+ FF + IIN A Sbjct: 1 MKILLTGSNGQLGRDFQKLFDSLKIEYIATDYQELDITSDKNLEKFFEKNNDFTHIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSP 117 AY VDKAE + ++ F +N + +A+ + I + STD+VFDG + I++ +P Sbjct: 61 AYNDVDKAEIDNKV-FLLNEQAPQKLAEFSKKISAIFVTYSTDFVFDGKKEKDYIEDDTP 119 Query: 118 TNPLNIYGKSKLAGEE-KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P++ YG +K GE+ + +Y ++VI RT+WV+ +NF ++ +K R ++++V Sbjct: 120 T-PVSNYGLAKANGEKLTLEAYEKSFVI-RTSWVFGKANNNFNTQVINWSKTRDKLNIVD 177 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ PT + +A + + LI+ T G++H+T + G S D A+Y+ E+ Sbjct: 178 DQISVPTYSKDLA----EFSWKLIQ---TGQFGLYHIT-NNGTASKYDQAKYVL----EK 225 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G K+ T+ + A RP +S L K+ +I WK G+ L Sbjct: 226 IGWKGKLGTTKTEDFNLPAKRPHFSKLSSEKVEKLLGEKIPDWKSGIDRYL 276 >gi|328955704|ref|YP_004373037.1| dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose reductase [Coriobacterium glomerans PW2] gi|328456028|gb|AEB07222.1| dTDP-4-dehydrorhamnose 3,5-epimerase ;dTDP-4-dehydrorhamnose reductase [Coriobacterium glomerans PW2] Length = 486 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 27/285 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ +++ + Q+ ++ DID P ++++ S +IN Sbjct: 189 RTLVTGCNGQLGRAVRTYA-QEHDLQGFDYCDIDTFDFADPDAYSAYDWSLY-GTVINCG 246 Query: 59 AYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVD+AE +A+ NA G +A+ I +++S+DYVFDG+ + E Sbjct: 247 AYTAVDRAETREGRAVAWRANAAGPALLARTCVEHSITLVHVSSDYVFDGVLDSHT-ELE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-------R 169 P PL +YG++K AG+ VA+ +Y++ R++WV G NF+ +M+ L++ Sbjct: 306 PFAPLGVYGQTKAAGDIAVATCPAHYIV-RSSWVIGE-GRNFVKTMMALSRRVADNDDAL 363 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++SVV DQ G T +AR I H L SD G +++T +G SWAD A+ + Sbjct: 364 TQVSVVDDQLGRLTFTRDMARGIF---HLLDSGSDF---GTYNLTGEGEVRSWADIAQAV 417 Query: 230 FWESAERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 F + G P S + P RP +S LD +K+ T Sbjct: 418 FDRTCGNGEAVVPVSTARYYGASEVPVSP-RPIHSALDLTKIEAT 461 >gi|119961083|ref|YP_948860.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] gi|119947942|gb|ABM06853.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] Length = 477 Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 146/276 (52%), Gaps = 22/276 (7%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G NGQ+ ++L D+ + GR + DL + F S + D IIN AAYTA Sbjct: 192 TLVLGANGQLGKALREAYKDDLSVEFAGRTEFDLTSEEAFGSRNWK-NYDTIINAAAYTA 250 Query: 63 VDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 VD AE D A+ IN +A+ A + +++S+DYVFDG S + +EFS Sbjct: 251 VDAAESADGRRAAWQINVSAVARLARLAVEHDLTLVHVSSDYVFDGTSDLHSEDEEFS-- 308 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG++K AG+ V+ +Y++ R +WV G+NF+ +M +LA + +VV DQ Sbjct: 309 -PLGVYGQTKAAGDAVVSVVPKHYIV-RASWVIGD-GNNFVRTMAKLAAAGVKPAVVNDQ 365 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T A+ +A +I + + E G ++++ +G P SWAD A +F E A G Sbjct: 366 TGRLTFAVDLAESIRHLLDSGAE------YGTYNLSNEGDPQSWADIAADVF-ELA--GA 416 Query: 239 PYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 + + T++Y T A RP S LD +KL + Sbjct: 417 DRDDISGVSTEEYFRDKTAATRPLNSVLDLTKLTES 452 >gi|311742181|ref|ZP_07715991.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272] gi|311314674|gb|EFQ84581.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272] Length = 468 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/280 (33%), Positives = 143/280 (51%), Gaps = 27/280 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G +GQ+ Q+L VE VG D+DL + A + + D IIN AA Sbjct: 188 RTLVTGADGQLGQALRRALAGADHVEFTDVG--DLDLTQDLTEARPWRQY--DTIINAAA 243 Query: 60 YTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFS 116 YTAVD AE + A+ +N + +A A I +++S+DYVFDG + P DE Sbjct: 244 YTAVDTAETLEGRRDAWRVNVDSVSNLAAVAARNQITVVHVSSDYVFDGTVEEHPEDE-- 301 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P +PL +YG++K A + +A+ +YV+ RT+WV G+NF+ +M LA + +VV Sbjct: 302 PFSPLGVYGQTKAAADAVIATVPRHYVV-RTSWVIGD-GANFVRTMASLADRGIDPAVVD 359 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG T +A I+ + + E G ++++ G SWA A+ +F E A Sbjct: 360 DQFGRLTFTDDLAAGILHLVDSGAE------YGTYNLSNTGPVSSWAAVAKRVF-ELA-- 410 Query: 237 GGPYSKVYRIFTKQY-----PTKAHRPAYSCLDCSKLANT 271 G ++V + T++Y + RP +S L KL T Sbjct: 411 GHDPARVSPVSTEEYFAGKDALVSPRPRHSALSLDKLTAT 450 >gi|19551582|ref|NP_599584.1| dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme [Corynebacterium glutamicum ATCC 13032] gi|62389231|ref|YP_224633.1| dTDP-4-dehydrorhamnose 3,5-epimerase, dTDP-dehydrorhamnose reductase [Corynebacterium glutamicum ATCC 13032] gi|21323098|dbj|BAB97726.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Corynebacterium glutamicum ATCC 13032] gi|41324565|emb|CAF19047.1| DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase [Corynebacterium glutamicum ATCC 13032] Length = 453 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 25/289 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV+G GQ+ +L + D E + R ++D+ A + +S IIN AAYT Sbjct: 182 KVLVVGAGGQLGTALRAQF-PDAEFVT--RQELDITSDLTEARAWKQYS--TIINAAAYT 236 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE + A+ INA +A A + +++S+DYVFDG + + DE +P +PL Sbjct: 237 AVDQAEHDRAAAWDINAAAVANLATIARDNNLTLVHVSSDYVFDGAAES-YDENAPFSPL 295 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AG+ + +Y++ RT+WV G+NF+ +M L + SVV DQ G Sbjct: 296 GVYGQSKAAGDIAATTAPRHYIV-RTSWVIGD-GNNFVRTMKSLDERGIAPSVVDDQIGR 353 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 + IA IAH L+E + G +++T G P SWAD A +F + + Sbjct: 354 LSFTEDIAAG---IAH-LLEVG--AAYGTYNLTNTGEPASWADVARAVFSDP-------T 400 Query: 242 KVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +Y A RP S LD K+ T TW+ + + L Sbjct: 401 KVTGVSTAEYFANKDAAPRPLNSVLDLGKIEAT-GFSAPTWQTRLNDYL 448 >gi|220904398|ref|YP_002479710.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868697|gb|ACL49032.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 295 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 16/290 (5%) Query: 2 KCLVIGN-NGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L++G G + Q+L + + ++ +GR D +++ S L+ DV+ N Sbjct: 3 KALILGGATGLLGQALVRVLAARGWQVATLGRQDGNVMDFDFLQSRLLAAHADVVFNAVG 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPT 118 +TAVD AED+P+ A N A+A ++G ++ STD+VF G TP+ E Sbjct: 63 FTAVDAAEDDPDAACEANRTLPDALAHILKTLGNGYLVHYSTDFVFQGQGETPLTEEDEP 122 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL++YG +KL GE+ + +LRTAW++ NF+ +++ ++R I+VV D Sbjct: 123 HPLSVYGSTKLEGEQAILRELPERSCVLRTAWLFGPGRKNFVDTIVAACEKRDTINVVHD 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT ++ +A Q + L E T G++H + G SW + A ES Sbjct: 183 QVGSPTYSMDLA----QWSAALAEKQAT---GLWH-AVNSGQASWCELA----CESINLA 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + Q+P KA RP +S LD +KL + W + +R+ + Sbjct: 231 AASCRVMPIDSAQWPQKAQRPEFSVLDNNKLGAFLGKKPRPWPQALRDYI 280 >gi|303234358|ref|ZP_07320997.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna BVS033A4] gi|302494474|gb|EFL54241.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna BVS033A4] Length = 281 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 79/280 (28%), Positives = 146/280 (52%), Gaps = 18/280 (6%) Query: 7 GNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G +G+I + L ++D E++ + +D++ + + F P+VIIN +A T Sbjct: 10 GADGKIGKVLQKYLDPLED-EVLATDKDIVDIVNSDETSIFARRNRPNVIINCSALTDPV 68 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P +Y Sbjct: 69 ACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHPTTMY 128 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 GKSKL GE V ++ + ILRT+W++S + +++ A++ ++ V Q+ +PTS Sbjct: 129 GKSKLMGENFVREFSVKHFILRTSWLFSPVNHR-VEDIIKEAQQTGKVLVPKAQYSSPTS 187 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 A Q+A I+++ T GI+H + + G S +FAE I + G ++V Sbjct: 188 AYQLAEFIVKLM-------STYDYGIYHASCE-GVASRKEFAEEIL----KIKGINAEV- 234 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 I + + HRP ++ L+ L + + + W+ ++ Sbjct: 235 -IEDENLRVEGHRPDFTALENFLLNTSQIYKFTDWQTSLK 273 >gi|148508211|gb|ABQ75999.1| predicted dTDP-4-dehydrorhamnose reductase [uncultured haloarchaeon] Length = 290 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 34/287 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFL------------- 47 M+ L+IG +G + ++ VQ+ E + P ++ L Sbjct: 1 MRLLIIGGSGLVGSNI----VQEAETNDIEVYATHNTSPSEYTEISLDKTDQERTKAIAE 56 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 PDVII+ AAY AVD E E A+++NA G A AA S+G IY+STDYVF G Sbjct: 57 EVDPDVIIDTAAYHAVDDCETNREHAWTVNAAGTKNAAVAASSVGAHYIYLSTDYVFLGN 116 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 S TP E P +P+N Y ++K AG E+ + ++ ILR + VY + G+NF L Sbjct: 117 KSDTPYSEDDPVSPVNYYAETKYAG-ERASRIVSDATILRPSVVYGLAGNNFTTWALGEL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + EI++V DQF T T A +A+A + +A L G++H GPV + F Sbjct: 176 ESGEEINIVNDQFSTTTYAPDLAQACVAVAKK-------GLTGLYHA---AGPVRQSRFQ 225 Query: 227 EYIFWESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 F Y S V I T+++ A RP LD S+L N+ Sbjct: 226 ---FTRQLAEAFDYDPSLVTPITTEEFGQDAPRPTDGSLDSSRLYNS 269 >gi|297587791|ref|ZP_06946435.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516] gi|297574480|gb|EFH93200.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516] Length = 281 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 81/281 (28%), Positives = 145/281 (51%), Gaps = 18/281 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + + G +G+I + L ++D E++ + +D++ + + F P+VIIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPLED-EVLATDKYIVDIVNSDETSIFARRNRPNVIINCSA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ + Sbjct: 64 LTDPVACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPH 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YGKSKL GE V ++ + ILRT+W++S + +++ A++ ++ V Q+ Sbjct: 124 PTTMYGKSKLMGENFVREFSVKHFILRTSWLFSPVNHR-VEDIIKEAQQTGKVLVPKAQY 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PTSA Q+A I ++ DT GI+H + + G S DFAE I G Sbjct: 183 SSPTSAYQLAEFIAKLM-------DTYDYGIYHASCE-GVASRKDFAEEIL----RIKGI 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++V I + + HRP ++ L+ L + + + W+ Sbjct: 231 DAEV--IEDENLRIEGHRPDFTALENFLLNTSQIYKFTDWQ 269 >gi|319442845|ref|ZP_07992001.1| hypothetical protein CvarD4_13899 [Corynebacterium variabile DSM 44702] Length = 288 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 81/237 (34%), Positives = 118/237 (49%), Gaps = 19/237 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D +IN AA+T VD AED A ++NA G +A AA +G +++STDYVF G Sbjct: 55 DTVINCAAWTDVDGAEDPANRATVEAVNATAPGILADAATQVGARFLHLSTDYVFPGTPP 114 Query: 110 TPIDEFS---PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSML 163 E++ PT PLN YG +K AGE V + ++RTAWV+S G +F+ +M Sbjct: 115 ETGREWAPDDPTGPLNAYGATKAAGERGVLEHGG--TVVRTAWVWSGPHAPGRDFVATMA 172 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 LA+ + VV DQ G PT A +A ++ ++ + L G+ H T G PV+W Sbjct: 173 GLAERGVDPKVVDDQTGRPTYAADLAAGLLALSQQ-----EGPLPGVLHYTNSGDPVTWC 227 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 A +F G +V + ++P A RP +S LD + T TW+ Sbjct: 228 GLAREVF---RLLGHDPQRVTPCGSDEWPAPARRPEWSVLDLAAWRETVG-EPPTWR 280 >gi|266631105|emb|CBH32105.1| putative NDP-hexose 4-ketoreductase [Streptomyces albaduncus] Length = 302 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 19/202 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + PDV++N A +T VD E +P A+ +NA GA +A+A +G Sbjct: 34 DITRAAGTERLMRAVRPDVVVNAAVFTGVDPCEADPARAYEVNAVGARHVARACADVGAR 93 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 C+YISTDYVFDG + P DE +P PL YG SKLAGE + + + ++++RTA ++F Sbjct: 94 CVYISTDYVFDGTAPDPYDETAPPRPLLTYGMSKLAGEGETLNASPGHLVVRTA---ALF 150 Query: 155 G---------SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 G F+ +LR A + V +PT +AR ++++ L ++D Sbjct: 151 GPPPPSHRRRPGFVEQILRRAAAGQRADVTDALVMSPTYTADLARMVVEL---LAADADG 207 Query: 206 SLRGIFHMTADGGPVSWADFAE 227 G +H+T +G +W A Sbjct: 208 ---GPYHVTNEGS-ATWYGLAH 225 >gi|117921234|ref|YP_870426.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117613566|gb|ABK49020.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 364 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/264 (31%), Positives = 132/264 (50%), Gaps = 44/264 (16%) Query: 4 LVIGNNGQIAQSLSSMCVQ-----DVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVII 55 L+ G + Q++++L + + D RV +D+ + A+ F PD +I Sbjct: 15 LLTGADSQLSKALVRVLARAAYRFDGRAFRVHALSHAQLDIGGKQSVAAVFAHVKPDWVI 74 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--------- 106 N AAY AVD+AE + A+ +N+ G +A G ++IS+DYVF G Sbjct: 75 NCAAYNAVDRAETAVDEAYRVNSLGPELLASECALTGARLVHISSDYVFSGEPAEVAELA 134 Query: 107 LSRTPIDEFSPTN--------------------PLNIYGKSKLAGEEKVAS-YTNNYVIL 145 L++ + + S +N PL++YGKSKLAGE+ V +++ Sbjct: 135 LNQNSLTDSSLSNSGLTESGLIERGLTESATPAPLSVYGKSKLAGEQAVLRILAERGMVI 194 Query: 146 RTAWVYSIFGSNFLLSMLRLAK---ERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 RTAW+Y + G NF+ +MLRL +R+ +SV+ DQ G+PT A +A I Q+ + + N Sbjct: 195 RTAWLYGVDGHNFVKTMLRLMATMPDRQPLSVINDQIGSPTWADALAHLIWQLIASPL-N 253 Query: 203 SDTSLRGIFHMTADGGPVSWADFA 226 + R +FH A G SW +FA Sbjct: 254 ASGEPR-LFHY-AGHGQCSWYEFA 275 >gi|114048177|ref|YP_738727.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] gi|113889619|gb|ABI43670.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] Length = 364 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 46/265 (17%) Query: 4 LVIGNNGQIAQSLSSMCVQ-----DVEIIRV---GRPDIDLLKPKDFASFFLSFSPDVII 55 L+ G + Q++++L + + D + RV +D+ + + F F+P+ +I Sbjct: 15 LLTGADSQLSKALLRVLAKAANRFDGRVFRVDALSHAQLDICDKQSVEAAFAHFNPEWVI 74 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--------- 106 N AAY AVD+AE A+ +N+ G +A G ++IS+DYVF G Sbjct: 75 NCAAYNAVDRAETAAVEAYRVNSLGPELLASECALTGARLVHISSDYVFSGEQAEVASQA 134 Query: 107 --------------------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVIL 145 L+ + E + PL++YG+SKLAGE+ V V++ Sbjct: 135 LNQCGITRSGLIESGLIESGLTEGGLTENAMPAPLSVYGQSKLAGEQAVLRILAERAVVI 194 Query: 146 RTAWVYSIFGSNFLLSMLRL---AKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIE 201 RTAW+Y + G NF+ +MLRL A + + ++V+ DQ G+PT A +A I Q IA L Sbjct: 195 RTAWLYGVDGHNFVKTMLRLMAAAPDAQPLTVINDQIGSPTWADALAHLIWQLIASPLNV 254 Query: 202 NSDTSLRGIFHMTADGGPVSWADFA 226 T G+FH A G SW +FA Sbjct: 255 GCGT---GLFHY-AGQGQCSWYEFA 275 >gi|330508400|ref|YP_004384828.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP-6] gi|328929208|gb|AEB69010.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP-6] Length = 290 Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 131/289 (45%), Gaps = 37/289 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RP------DIDLLKPKDFASFFLSFS 50 M+ + G +G L+ M + E + G +P DLL Sbjct: 1 MRIFITGGSGLAGSKLAEMALARGEQVYSGYAHNQPPYGKEVKFDLLDANGIRDTIERMR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VD+ E + ++A+ IN EG IA+AA G +YISTDYVFDG R Sbjct: 61 PDVIVHSAALTDVDRCERKKDLAYRINVEGTRTIAEAARKAGSYLVYISTDYVFDG-QRG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E TNP++ YG SKL GE+ + I RT +Y + NF L +L Sbjct: 120 LYREEEETNPVSYYGLSKLLGEQFC---LDQGCIARTCVIYGSRPASGKVNFALWLLNAL 176 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K +E+ VV DQF TPT +A +++ A+ +L GI+H++ VS DFA Sbjct: 177 KSGKEVRVVTDQFITPTLNSNLAAMVLEAANR-------NLSGIYHLSG-AARVSRYDFA 228 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 E + R+ + A RP S LD SK + T Sbjct: 229 -------CELARAFDIDRRLIIPSQMSDIGWLARRPMDSSLDTSKASRT 270 >gi|288932726|ref|YP_003436786.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642] gi|288894974|gb|ADC66511.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642] Length = 290 Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 27/243 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII--------RVGRP-DIDLLKPKDFASFFLSFS 50 M+ + G +G + L+ + ++ E+ G+P DL Sbjct: 1 MRIFITGGSGLLGSKLAEIALEKGYEVYSGYNSHKPEFGKPVKFDLANSDSVVRAISEVK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VD+ E E ++A+ IN EG +A+ A +G +YISTDYVFDG R Sbjct: 61 PDVIVHSAALTDVDRCEVEKDLAYKINVEGTKIVAEMARKVGAYMVYISTDYVFDG-ERG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E T+P+N YG +KL GE+ Y ++ I RT +Y + NF L ++ Sbjct: 120 MYKEEDETHPINYYGYTKLLGEK----YCRDFCIARTCVIYGAKPASGKVNFALWLINKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + + +V DQF TPT +A+ + + A + L+G+FH+ A VS +FA Sbjct: 176 ENGESVKIVTDQFITPTLNTNLAKMVFECA-------ERKLKGVFHL-AGATRVSRFEFA 227 Query: 227 EYI 229 + I Sbjct: 228 KEI 230 >gi|229578479|ref|YP_002836877.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|228009193|gb|ACP44955.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] Length = 274 Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 146/295 (49%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LS + D I++V G +DL F + PDV Sbjct: 1 MRILITGASGQLGFELSEVLKGD--IVKVYNTKEVQGGYKLDLTNYSAVEDFIIKKRPDV 58 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E E +AF +NAE I +A+ + I+ISTDYVFDG + Sbjct: 59 IINTASLTDVDKCEVERSLAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDGKKGLYKE 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E P NP+N YG +KL GE SY ++ VI RT+ V+ G F + + + KE +E+S Sbjct: 119 EDLP-NPINYYGLTKLLGETYALSYDDSLVI-RTSGVFRHKG--FPIYVYKTLKEGKEVS 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI + LIE T GI ++ ++ VS D A I E Sbjct: 175 AFKGYY-SPISARKLAEAISE----LIEYRKT---GILNVASE--RVSRVDLAMKI-KEK 223 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 GG +V + K + K RP S LD SK + + E +R ++V Sbjct: 224 FNLGGSVKEVDEV--KGWIAK--RPFDSSLDISKAKKLLSTDFYSLDENLRYMVV 274 >gi|163846004|ref|YP_001634048.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222523729|ref|YP_002568199.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] gi|163667293|gb|ABY33659.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222447608|gb|ACM51874.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] Length = 284 Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 15/221 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G NGQ+ ++L + ++ +G ++L P + DV+I+ AAY Sbjct: 1 MRIAITGANGQLGRALIATLADQHTLVPLGHDQLELTDPVTVEQIAAT-DADVVIHAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P +A+ +N G +A I +YIST+ VF G +R P E P Sbjct: 60 TNVDGCARDPGLAYRVNGLGTRYVALGCRRIDAALVYISTNEVFAGDARRPYFEDDPPRA 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKE--RREISVVC 176 +N YG+SKLAGE+ V S + I+R AW +FG NF+ ++LRLA + +V Sbjct: 120 INPYGQSKLAGEQAVRSLVARHFIVRVAW---LFGGERNFVRTVLRLAANPPAHGLRMVA 176 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 D+ G+PT +A + ++ T G +H DG Sbjct: 177 DEIGSPTYTFDVAAGLARLI-------TTDYYGTYHFVNDG 210 >gi|330945654|gb|EGH47135.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. pisi str. 1704B] Length = 133 Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 5/133 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGTDGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEEQWQES 120 Query: 116 SPTNPLNIYGKSK 128 +PT PL++YG+SK Sbjct: 121 APTGPLSVYGRSK 133 >gi|300779957|ref|ZP_07089813.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium genitalium ATCC 33030] gi|300534067|gb|EFK55126.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium genitalium ATCC 33030] Length = 449 Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 145/291 (49%), Gaps = 34/291 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL-------LKPKDFASFFLSFSPDVI 54 + LV G NGQ+ ++L + VG + DL + +D+ + I Sbjct: 173 RVLVTGANGQLGRALRPLLPHG---DFVGHDEFDLTSDVSTLMSARDWTQY------SAI 223 Query: 55 INPAAYTAVDKAE-DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IN AA+ V+ AE D A+++NA G +A+ A + + +STDYVFDG + Sbjct: 224 INAAAFNDVNGAEGDGRNGAWAVNALGPAKLAQIAGRYDLTLVNVSTDYVFDGTVGVHTE 283 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 + +P+ PL++YG SK AGE A+ +Y++ RT+WV+ G NF+ +M RLA+E Sbjct: 284 DEAPS-PLSVYGASKAAGEAATAACPRHYLV-RTSWVFGD-GGNFMTTMARLAREDASPQ 340 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G PT A +AR I+ + + E G++++T+ G S + A +F Sbjct: 341 VVSDQRGRPTWAEDLARGIVHLLDSGAE------YGVYNITSGGDTASRDEIAMAVFIAC 394 Query: 234 AERGGPYSKVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 GG S V + T QY +A RPA S L K+ T + + W+ Sbjct: 395 ---GGDPSSVQPVTTAQYQEAFGPEAPRPAESTLALDKIEAT-GFKPTNWR 441 >gi|282165389|ref|YP_003357774.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] gi|282157703|dbj|BAI62791.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] Length = 281 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 110/226 (48%), Gaps = 13/226 (5%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P+ +++ AA T VD ED P+ A SIN G + AA G IY+STD+VFDG S Sbjct: 54 LKPEYVVHTAALTNVDYCEDHPDEAASINDMGTKNVVDAARMAGARLIYVSTDFVFDG-S 112 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 + E P NP+++Y SKL GE +V + I RT+ VY NF+ + + Sbjct: 113 KGMYREEDPVNPISVYAYSKLMGEYRVKELPGS-AIARTSVVYGNARQNFVTWVRDSLAK 171 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 ++ I VV DQF +PT + A AI + + E G +H TA G +S DFA Sbjct: 172 KQTIKVVTDQFNSPTLSYDCALAIAALIRHGAE-------GTYH-TAGGERISRYDFAVK 223 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 I G V KQ KA RPA S LD SK+ H + Sbjct: 224 IARFYGLDPGLIEPVTSDTLKQ---KAKRPADSSLDVSKIGQYHQM 266 >gi|300865161|ref|ZP_07109985.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] gi|300336851|emb|CBN55135.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] Length = 287 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 22/293 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--------VEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK LVIG +G + L C Q + G + + S P+ Sbjct: 1 MKVLVIGGSGLVGSHLLQTCHQRGWNVTGTYQNFAQPGLIPLQITNAAAVRSLITESQPE 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+ PA + VD E PE + IN G +A A + ++ S+DYVF+G P Sbjct: 61 VVFLPAFRSNVDYCEQNPEETYQINVVGCLNVAHATRDVRAKLVFYSSDYVFNG-KNGPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAKERR 170 E +P+ +YG KL EEK++ ++Y+I R AWVY G NF+L ++ + + Sbjct: 120 QEIDKPDPICVYGLQKLEVEEKISELLDDYLICRIAWVYGQEKQGKNFVLRLISMLTNNQ 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 I V DQ G+PT A I A ++ + +G+FH+T + + ++ Sbjct: 180 AIRVPQDQVGSPTLADDIGEASCRLV-------EVGAKGLFHITG----IDCMNRYQFAL 228 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + G + + T + A RP + C +L N + EG+ Sbjct: 229 KIAEVFGLQTDTLLPVMTSELNQAAARPLKCGMRCDRLVQNLNWNLRGVLEGL 281 >gi|294146452|ref|YP_003559118.1| dTDP-4-dehydrorhamnose reductase [Sphingobium japonicum UT26S] gi|292676869|dbj|BAI98386.1| dTDP-4-dehydrorhamnose reductase [Sphingobium japonicum UT26S] Length = 744 Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 18/281 (6%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G G + ++++ C ++++ I R ++DL P+ A+ +P ++N A + Sbjct: 458 LICGATGTLGRAMARACALRNIPFILTSRAELDLTAPETVAAALDRIAPWAVVNAAGWVR 517 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + S NA GA A+AKA G+ + S+D VFDG P E P P N Sbjct: 518 VDEAETARDACLSANARGAVALAKACGDRGVASLSFSSDLVFDGKKGAPYVEDDPVAPRN 577 Query: 123 IYGKSKLAGEEKVASY-----TNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVC 176 YG SK EE +A+ + ++I+RTA +S NF ++++R + I Sbjct: 578 CYGLSKAEMEEGIAALGAPHPSGRHLIIRTAAFFSPHDDHNFAVAVVRSLRRGETILAAE 637 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D TPT + + + LI+ G +H+T +G +SWADFA I + Sbjct: 638 DLIVTPTYVPHLVATSLDL---LIDGEA----GPWHLT-NGEALSWADFARRI---AMSC 686 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 G S++ + + A RPA + L + A H++ ++ Sbjct: 687 GCDPSRIRGVPHRTLGWTAERPANAALASRRGAPLHSLAMA 727 >gi|296118114|ref|ZP_06836696.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium ammoniagenes DSM 20306] gi|295969000|gb|EFG82243.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium ammoniagenes DSM 20306] Length = 468 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 30/295 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ ++L ++ + R + D+ D A+ S D IIN AAY Sbjct: 176 KILVTGADGQLGRALRAVYKNAAHVEFTTRTEFDITA-ADIATARPWRSYDAIINCAAYN 234 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE + A+ +NA +A A + +++S+DY+FDG + P+ PL Sbjct: 235 DVNGAETDRADAWEVNATAPARLAAIAAENNLTFVHVSSDYIFDGTQEVHTEAELPS-PL 293 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AG+ + YVI RTAWV+ G+NF+ +M LA+ E V+ DQ G Sbjct: 294 SAYGASKAAGDTAAQTAPRRYVI-RTAWVFG-EGNNFMSTMASLAQRNIEPLVINDQIGR 351 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I H L +D G++++T+ G V + A +F G + Sbjct: 352 PTYAEDLAKG---IKHLLDTRAD---YGVYNLTSGGDAVGRDEIAMAVF---IGMGHDPT 402 Query: 242 KVYRIFTKQY----------------PTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V+ + T QY +A RPA S LD +K+ T + S W+ Sbjct: 403 EVHSVSTAQYNEHRVQQATENNQPAPAPEALRPAASTLDLTKIEAT-GFKPSNWR 456 >gi|294507877|ref|YP_003571935.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|294344205|emb|CBH24983.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 307 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 28/234 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q+L Q+ E ++ R D +D+ +P D A F Sbjct: 5 RVLITGANGLLGQALVHRLSQNREYDVLATARDDAPRFEDGSCGYAPLDVTQPDDVAQIF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F+PDV++N AA T V + ++ A+++NA +AK + G + +STD+VF+G Sbjct: 65 EDFTPDVVVNCAAMTDVGRCDEHRSEAWAVNARAVKTLAKHCRTSGARLVQVSTDFVFNG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYS----IFGSNFLLS 161 R P DE + +P+N YG++KLAGE V N+ I+RT +Y + SN +L Sbjct: 125 -KRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLLYGTGRDLRRSNIVLW 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + + + +V DQ TPT +A I ++ H+ GI+H++ Sbjct: 184 VADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLHH-------EATGIYHVSG 230 >gi|145294461|ref|YP_001137282.1| hypothetical protein cgR_0416 [Corynebacterium glutamicum R] gi|140844381|dbj|BAF53380.1| hypothetical protein [Corynebacterium glutamicum R] Length = 450 Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 25/289 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV+G GQ+ +L + D E V R ++D+ A + +S IIN AAYT Sbjct: 181 QVLVVGAGGQLGTALRAQF-PDAEF--VTREELDITSDLTGARAWKQYS--TIINAAAYT 235 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE + A++INA +A A + +++S+DYVFDG + + DE +P +PL Sbjct: 236 AVDQAEHDRAAAWAINATAVANLATIARENNLTLVHVSSDYVFDGAAES-YDENAPFSPL 294 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AG+ A+ +Y++ RT+WV G+NF+ +M L + SVV DQ G Sbjct: 295 GVYGQSKAAGDIAAATAPRHYIV-RTSWVIGD-GNNFVRTMKSLDERGIAPSVVDDQIGR 352 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T IA IAH L+E + G +++T G P SWAD A +F + S Sbjct: 353 LTFTEDIAAG---IAH-LLEVG--AAYGTYNLTNTGEPASWADVARAVFSDP-------S 399 Query: 242 KVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +Y A RP S L+ K+ T TW+ + N L Sbjct: 400 KVTGVSTAEYFADKDAAPRPLRSVLNLGKIEAT-GFSAPTWQTRLNNYL 447 >gi|313676859|ref|YP_004054855.1| dtdp-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126] gi|312943557|gb|ADR22747.1| dTDP-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126] Length = 298 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 27/235 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-------------PDIDLLKPKDFASF 45 MK L+ G+NG + Q L + + + E+I R +D+ ++ S Sbjct: 1 MKILITGSNGLLGQKLVKLIIANGGHELIATARGKNRLPKESGYIFESLDITSEQEVRSV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 ++ PDVIIN AA T VD+ E E E + +N + KA+++ + +STD++FD Sbjct: 61 IMNHRPDVIINTAAMTNVDQCETEQEDCWKLNVTAVKHLLKASEACNAFFLQLSTDFIFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLS 161 G P E + NP++ YG+SKLA E+ + ++ I RT VY I SN +L Sbjct: 121 G-EDGPYTEEAIANPVSYYGESKLAAEQLILESKIDWAIARTVLVYGIAHDMSRSNIILW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + +E ++I VV DQ+ TPT A +A+ + IA + +GI++++ D Sbjct: 180 VKKSLEEGKDIQVVDDQWRTPTLAEDLAKGCLLIA-------EKKAKGIYNISGD 227 >gi|218670903|ref|ZP_03520574.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli GR56] Length = 121 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%) Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G PTSAL IA A++ IA ++ ++D SLRG FH+T G SWADFAE IF Sbjct: 1 VVADQTGCPTSALDIADAVLAIATRVVADADPSLRGTFHLTGSG-EASWADFAEEIFAAL 59 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + GG V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 60 LKSGGRNVGVERIPTTDYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 116 >gi|307592210|ref|YP_003899801.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306985855|gb|ADN17735.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 719 Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 21/270 (7%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +++G +G + ++ +C ++ V + R ++D+ P +IN A Y Sbjct: 445 VIVGASGTLGKAFGRLCEIRGVAYRLLSRQEMDITDAVSIERVLAELKPWAVINAAGYVR 504 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE EPE+ +NAEGA +A+ G + S+D VFDG P E PLN Sbjct: 505 VDDAEKEPEVCLKVNAEGAAILAEVCRRYGAKYLTFSSDLVFDGTGSNPYLEDDDIAPLN 564 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVCDQ 178 +YG+SK E++V + +++RT+ + FG NF+ LR + D Sbjct: 565 VYGRSKALAEKQVLAADETALVIRTS---AFFGPWDEYNFVTIALRQLEAGESFVAASDV 621 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT ++Q + +L+ + + G++H+ A+ G +SWAD A Y +A+ G Sbjct: 622 VISPTYVPD----LVQASLDLLVDDEC---GLWHL-ANKGAISWADLARY----AAQAAG 669 Query: 239 PYS-KVYRIFTKQYPTKAHRPAYSCLDCSK 267 + + + K+ A RP+YS L K Sbjct: 670 VNTDNLISLPLKELGLIAARPSYSVLGSHK 699 >gi|317508993|ref|ZP_07966625.1| RmlD substrate binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252703|gb|EFV12141.1| RmlD substrate binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 286 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 86/301 (28%), Positives = 136/301 (45%), Gaps = 31/301 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 ++ G GQ+ L+ + + + ++ + R +D+ A + P DV++N AA T Sbjct: 1 MITGAGGQVGSRLAQVASEHEYNVLALARTQLDICDEDAVAE---TLRPGDVVVNCAAET 57 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---------LSRTPI 112 +VD AE + A INAE G +A A D IG I++STDYVF G L+R P Sbjct: 58 SVDTAESDSARAHQINAEAVGNLAAACDRIGARFIHVSTDYVFAGQEEGWFSVRLAR-PY 116 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE- 171 + P+ +YG+SKLAGE V++RT+WV+S G + + A+E+ E Sbjct: 117 ETDDEPRPIQVYGESKLAGERLAFERNPRSVVVRTSWVFS--GERNGIDFVSTAREQAES 174 Query: 172 ---ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + V DQ G+PT +L + +++ L+ D G + G S D A Sbjct: 175 GGVMRAVTDQVGSPTHSLDLVYGLME----LVWRGD---EGALLQFCNTGGCSRYDLARA 227 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +F E G V + + A RP YS L + W++ +R L Sbjct: 228 VF---EELGADPGLVRPCMSWELSRPASRPPYSVLSVASWVQRGLRPPRAWRDALRYALT 284 Query: 289 N 289 + Sbjct: 285 H 285 >gi|126173711|ref|YP_001049860.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125996916|gb|ABN60991.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 381 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 72/325 (22%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +++ + R +D+ + A+ F + P +IN AAY AVD AE + A +NA G Sbjct: 64 LKLYALSRSQLDITDAANIAAVFDQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPEL 123 Query: 84 IAKAADSIGIPCIYISTDYVFDG------------------------------------- 106 +A+ G +++S+DYVF G Sbjct: 124 LAQQCLQSGARLLHVSSDYVFGGHTVCGIAHAAERAVCDARESGVEQHQNPDLAPNSNPN 183 Query: 107 -LSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 L R P E PL+ YGKSKL GE KV A I+RT+W+Y G NF+ +ML Sbjct: 184 HLPR-PFVELDAPEPLSTYGKSKLLGELKVVAILGERATIVRTSWLYGQNGHNFVKTMLN 242 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L + + + V+ DQ G PT + +A+ I Q+ +++ G+FH +A G SW + Sbjct: 243 LMRTQPSLQVIADQIGCPTWSDALAQVIWQL---VVQQCS----GVFHYSAQ-GQCSWYE 294 Query: 225 FAEYIFWESAERG--------GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT- 271 FA I ++ P + + + KQ + A RP+YS L+ KL +T Sbjct: 295 FACEIQRQALALNLLSLPVVIQPITSAH--YAKQALNRGVGLAKRPSYSVLNSGKLRSTL 352 Query: 272 ---------HNIRISTWKEGVRNIL 287 N+ W++ + +L Sbjct: 353 VTNNTQSIPDNVEWQDWRQQLNCML 377 >gi|260890984|ref|ZP_05902247.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia hofstadii F0254] gi|260859011|gb|EEX73511.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia hofstadii F0254] Length = 293 Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 15/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDV-IINPA 58 +K L+ G++GQ+ + ++ + ++++ + +FF + +IN A Sbjct: 10 LKILLTGSDGQLGHDFQKLFDNLNINYVATDHKELNVSNDNELENFFEKNNDFTHVINCA 69 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VDKAE AF +N +A+ + + + STD+VFDG P E Sbjct: 70 AYNDVDKAEINNN-AFLLNQRAPQKLAEFSKQMNAVFVTYSTDFVFDGKKAAPYIEEDVP 128 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL+ Y SK GE+ V + + +RT+W++ I G NF ++ +K R ++S+V DQ Sbjct: 129 NPLSRYAISKHEGEKAVLAAWHKSFAIRTSWLFGINGENFNTQVINWSKTRDKLSIVDDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + +A + + LI+ T G++H+T + G S + A+Y+ E+ G Sbjct: 189 ISAPTYSKDLA----EFSWKLIQ---TEKYGLYHIT-NSGIASKYEQAKYVL----EKIG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + TK + A RP +S L K+ +I WK G+ L Sbjct: 237 WKGILETAKTKDFNLPAKRPYFSKLSSEKVEKLLGKKIPDWKNGIDRYL 285 >gi|304409585|ref|ZP_07391205.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|307303943|ref|ZP_07583696.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] gi|304352103|gb|EFM16501.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|306912841|gb|EFN43264.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] Length = 393 Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 74/349 (21%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L + +N + ++S+ +E+ + R +D+ + A F + P +IN AAY AV Sbjct: 50 LALNSNANTSTNISANTGAPLELYALSRSQLDITDAANIAVVFDQYRPSWVINCAAYNAV 109 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----------------- 106 D AE + A +NA G +A+ G +++S+DYVF G Sbjct: 110 DAAEHDAIEANRVNALGPELLAQQCLLSGARLLHVSSDYVFGGQAVCEIAHAAERAVGDA 169 Query: 107 ---------------------------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 L R P E PL+ YG SKL GE++V + Sbjct: 170 RESGVEQHQNPDSASNSNPNPNPNQVHLPR-PFVELDAPEPLSAYGTSKLLGEQRVVAVL 228 Query: 140 NNYV-ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 + V I+RT+W+Y G NF+ +ML L + + + V+ DQ G PT + +A+ I Q+ Sbjct: 229 GDCVTIVRTSWLYGQDGHNFVNTMLNLMRTQPSLQVIADQIGCPTWSDALAKVIWQLVVQ 288 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQYP 252 G+FH +A G SW +FA I +S G + KQ Sbjct: 289 -------QCSGVFHYSAQ-GQCSWYEFACEIQRQSIALHLLSLPVGILPITSADYAKQAL 340 Query: 253 TK----AHRPAYSCLDCSKLANT----------HNIRISTWKEGVRNIL 287 + A RP+YS L+ KL +T +N+ W++ + +L Sbjct: 341 NRGISLAKRPSYSVLNSGKLRSTLVTNNTQSIPNNVEWQDWRQQLNCML 389 >gi|295856706|gb|ADG46994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum subsp. longum] Length = 483 Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 37/287 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + + D P + + S IIN Sbjct: 191 RTLVTGCNGQLGRAVRAYAEAHGLRGFEYTDID--EFDFSDPTAYDKYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPID 113 AYTAVDKAE + +A+ NA+G +A+ A I +++S+DYVFDG + + + Sbjct: 248 GAYTAVDKAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTAGLHSEDE 307 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA------- 166 F+ PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L+ Sbjct: 308 AFA---PLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GRNFVKTMMMLSDRVANPD 362 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQ+G T +A AI + + G +++T G +WA A Sbjct: 363 DQLEQVTVVDDQYGRLTFTKDMAEAIFHLL------DSHAPYGTYNLTGSGAVRNWAQIA 416 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKL 268 +F + G KV I T +Y A RP +S LD SK+ Sbjct: 417 SRVFELTNGNG---EKVKPISTAEYFANAKAPVSPRPEHSALDLSKI 460 >gi|300857650|ref|YP_003782633.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium pseudotuberculosis FRC41] gi|300685104|gb|ADK28026.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium pseudotuberculosis FRC41] gi|302329942|gb|ADL20136.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis 1002] Length = 460 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 99/272 (36%), Positives = 142/272 (52%), Gaps = 23/272 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + E R D+D+ A + +S VIIN AAYT Sbjct: 181 KVLVTGANGQLGRTLKKVFPH-AEF--CSRTDLDITTDITEARRWADYS--VIINAAAYT 235 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNP 120 AVD AE + A+ NAE +A A GI +++S+DYVFDG P+ E P +P Sbjct: 236 AVDAAETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDG--ELPVHSEQEPFSP 293 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SK AG+ V+ +YV+ RT+WV G+NF+ +ML LA R VV DQ G Sbjct: 294 LSVYGQSKAAGDTAVSVAPQHYVV-RTSWVVGE-GNNFVSTMLSLAARRISPQVVNDQLG 351 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T +A I L++N + G+++++ G VSWA A+ +F G Sbjct: 352 RLTFTEDLAAGI----RFLLDNH--APYGVYNLSNSGEIVSWAQLAQRVF---TLAGRSA 402 Query: 241 SKVYRIFTKQY----PTKAHRPAYSCLDCSKL 268 S V + T +Y A RP +S LD SK+ Sbjct: 403 SDVQPVSTTEYFAGKAPAAPRPRHSALDLSKI 434 >gi|302205388|gb|ADL09730.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis C231] gi|308275626|gb|ADO25525.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis I19] Length = 460 Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 99/272 (36%), Positives = 142/272 (52%), Gaps = 23/272 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + E R D+D+ A + +S VIIN AAYT Sbjct: 181 KVLVTGANGQLGRTLKKVFPH-AEF--CSRTDLDITTDITEARRWADYS--VIINAAAYT 235 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNP 120 AVD AE + A+ NAE +A A GI +++S+DYVFDG P+ E P +P Sbjct: 236 AVDAAETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDG--ELPVHSEQEPFSP 293 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SK AG+ V+ +YV+ RT+WV G+NF+ +ML LA R VV DQ G Sbjct: 294 LSVYGQSKAAGDTAVSVAPQHYVV-RTSWVVGE-GNNFVSTMLSLAARRISPQVVNDQLG 351 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T +A I L++N + G+++++ G VSWA A+ +F G Sbjct: 352 RLTFTEDLAAGI----RFLLDNH--APYGVYNLSNSGEIVSWAQLAQRVF---TLAGRSA 402 Query: 241 SKVYRIFTKQY----PTKAHRPAYSCLDCSKL 268 S V + T +Y A RP +S LD SK+ Sbjct: 403 SDVQPVSTTEYFAGKAPAAPRPRHSALDLSKI 434 >gi|229584494|ref|YP_002842995.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|228019543|gb|ACP54950.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] Length = 274 Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+IG +GQ+ LS + EII+V G +DL F + PDV Sbjct: 1 MRILIIGASGQLGLELSGILKG--EIIKVYNTKEIQGGYKLDLTNYSTVEDFIIKKRPDV 58 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E E F++NAE I +A+ I I+ISTDYVFDG R + Sbjct: 59 IINTASLTDVDKCEVEKAETFTVNAEAVKHIVRASRIIEAYLIHISTDYVFDG-ERGLYN 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG SKL GE SY ++ +I+RT+ V+ G F + + + KE +E+S Sbjct: 118 EGDLPNPINYYGLSKLLGETYALSYDDS-LIVRTSGVFRHKG--FPVYVYKTLKEGKEVS 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI + LI+ T GI ++ G +S D A I + Sbjct: 175 AFKGYY-SPISARKLAEAISE----LIQYRKT---GILNVA--GERISRVDLAMKI-KDK 223 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V + K + K RP S LD SK ++ + E + ++V Sbjct: 224 FNLSGSIKEV--DYVKGWIAK--RPFDSSLDISKAKKVLSVDFYSLDENLHYMVV 274 >gi|193216392|ref|YP_001997591.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] gi|193089869|gb|ACF15144.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] Length = 307 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 30/301 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRP-------------DIDLLKPKDFASFF 46 + L+ G NG + Q L+ D +++ R +D+L + Sbjct: 7 RVLITGANGLLGQKLTDCFAADRAYDLLATARQPTPYNQTASFGFISLDMLDRQAVKELV 66 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +F P+ I+N AYT VD E E ++ + N +A AA + +++STDY+FDG Sbjct: 67 WNFEPNFIVNAGAYTNVDGCEKEKDLCWKGNVIAVENLAAAARLVKAQVVHVSTDYIFDG 126 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS---NFLLSML 163 P DE NPL+ YG+SKLA E + + ++ I+RT VY + NF L + Sbjct: 127 -KNGPYDEAQQPNPLSYYGRSKLASENVLRNSGEHWAIIRTMVVYGVAAQCKKNFALWLA 185 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 K +++ +V DQFG T A +AR I + + + G+++M G VS Sbjct: 186 GELKAGKQVRIVDDQFGNTTLADDLARGIYMLVNK-------AKHGVYNMVG-GDNVSRY 237 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +FA + + G + + I T A RP S L K IR + E + Sbjct: 238 EFALRL---AEVFGFDKNLITPIKTADLSQLAERPMKSGLITLKAETELGIRFFSLNESL 294 Query: 284 R 284 R Sbjct: 295 R 295 >gi|83816254|ref|YP_445966.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] gi|83757648|gb|ABC45761.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] Length = 307 Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 28/234 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q+L Q+ E ++ R D +D+ +P D A F Sbjct: 5 RVLITGANGLLGQALVHRLSQNREYDVLATARDDAPRFEDGSCGYAPLDVTQPDDVAQIF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F+P+V++N AA T V + ++ A+++NA +AK + G + +STD+VF+G Sbjct: 65 EDFTPNVVVNCAAMTDVGRCDEHRSEAWAVNARAVKTLAKHCRTSGARLVQVSTDFVFNG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYS----IFGSNFLLS 161 R P DE + +P+N YG++KLAGE V N+ I+RT +Y + SN +L Sbjct: 125 -KRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLLYGTGRDLRRSNIVLW 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + + + +V DQ TPT +A I ++ H+ GI+H++ Sbjct: 184 VADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLHH-------EATGIYHVSG 230 >gi|323474311|gb|ADX84917.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A] Length = 274 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 145/295 (49%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LS + D +I+V G +DL F + PDV Sbjct: 1 MRILITGASGQLGIELSEVLKGD--LIKVYNTKEVQGGYKLDLTNYSAVEDFIIKKKPDV 58 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E +AF +NAE I +A+ + I+ISTDYVFDG + Sbjct: 59 IINTASLTDVDKCGIERGLAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDG-EKGLYK 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG SKL GE SY ++ ++LRT+ V+ G F + + + KE +E+S Sbjct: 118 EDDLPNPINYYGLSKLLGETYALSY-DDTLVLRTSGVFRHKG--FPIYVYKTLKEGKEVS 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI + LI+ T GI ++ G +S D A I E Sbjct: 175 AFKGYY-SPISARKLAEAISE----LIDYRKT---GILNVA--GERISRVDLAMKI-KEK 223 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 GG +V + K + K RP S LD SK ++ + E +R ++V Sbjct: 224 FNLGGSVKEVDDV--KGWVAK--RPFDSSLDISKAKKILSVDFYSLDENLRYMVV 274 >gi|227827280|ref|YP_002829059.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|227459075|gb|ACP37761.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] Length = 275 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LSS+ ++ E+I+ G +DL F + PDV Sbjct: 1 MRILITGASGQLGLELSSVLKEE-ELIKTFNIKEEQGGYKLDLEDFPLLEDFIIKKRPDV 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E E AF +NAE I +A+ I I++STDYVFDG R + Sbjct: 60 IINTASLTDVDKCEVEKAEAFKVNAEAVKHIVRASRVIEAYLIHLSTDYVFDG-ERGLYN 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG SKL GE SY ++ +I+RT+ V+ G F + + + KE +E+S Sbjct: 119 EGDLPNPINYYGLSKLLGETYALSYDDS-LIVRTSGVFRHKG--FPVYVYKTLKEGKEVS 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI + LI+ T GI ++ G +S D A I + Sbjct: 176 AFKGYY-SPISARKLAEAISE----LIQYRKT---GILNVA--GERISRVDLAMKI-KDK 224 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V + K + K RP S LD SK ++ + E +R ++V Sbjct: 225 FNLSGSIKEV--DYVKGWIAK--RPFDSSLDISKAKKILSVDFYSLDENLRYMVV 275 >gi|169823956|ref|YP_001691567.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328] gi|167830761|dbj|BAG07677.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328] Length = 281 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 18/288 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + + G +G+I + L +D E++ + +D++ + + F P++IIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPFED-EVLATDKYIVDIVNSDETSIFARRNRPNIIINCSA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ + Sbjct: 64 LTDPVLCQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPH 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YGKSKL GE V ++ + ILRT+W++S + +++ A + ++ V Q+ Sbjct: 124 PTTMYGKSKLMGENFVREFSVKHFILRTSWLFSPVNHR-VEDIIKEAIQTGKVYVPKAQY 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PTSA Q+A I+++ T GI+H + + G S +FAE I + G Sbjct: 183 SSPTSAYQLAEFIVKLMA-------TYDYGIYHASCE-GVASRKEFAEEIL----KIKGI 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V I + + HRP ++ L+ L + + + W+ ++ + Sbjct: 231 DAEV--IEDENLRIEGHRPDFTALENFLLNTSQIYKFTDWQTSLQKYI 276 >gi|322691989|ref|YP_004221559.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456845|dbj|BAJ67467.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. longum JCM 1217] Length = 484 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 37/287 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + + D P + + S IIN Sbjct: 191 RTLVTGCNGQLGRAVRAYAEAHGLRGFEYTDID--EFDFSDPTAYDKYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPID 113 AYTAVD+AE + +A+ NA+G +A+ A I +++S+DYVFDG + + + Sbjct: 248 GAYTAVDRAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTADLHSEDE 307 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA------- 166 F+ PL +YG++K AG+ VA+ +Y ILR++WV G NF+ +M+ L+ Sbjct: 308 AFA---PLGVYGQTKAAGDIAVANAPEHY-ILRSSWVIGE-GRNFVKTMMMLSDRVANPD 362 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +++VV DQ+G T +A AI + + + G +++T G +WA A Sbjct: 363 DQLEQVTVVDDQYGRLTFTKDMAEAIFHLLDS------HAPYGTYNLTGSGAVRNWAQIA 416 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKL 268 +F + G KV I T +Y A RP +S LD SK+ Sbjct: 417 SRVFELTNGNG---EKVKPISTAEYFANAKAPVSPRPEHSALDLSKI 460 >gi|220932571|ref|YP_002509479.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168] gi|219993881|gb|ACL70484.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168] Length = 287 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 17/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G+ + ++ +I +GR D+D+ + L PD++I+ A Sbjct: 1 MKVLVTGDK-KFCRTFVKKLGTRYRVIFLGRDDLDITNTLEVEKKILDVYPDIVIHCLAL 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E + +AF IN+ GA +A A+ +YIST +VF G P E P Sbjct: 60 DDIEACERDKAMAFQINSYGAQNVAIASSMCEAKLVYISTSHVFSGRLNRPYRESDELQP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SKL E + + I+RT W+Y + + ++ +K+ + + + D++ Sbjct: 120 VNVYGLSKLLAENFIKEINRKFFIVRTGWLYGPGRDSLIGKLIETSKQEKTVELPGDRYD 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADFAEYIFWESAERGG 238 TPT I +AH + T G +H+T G SW E Sbjct: 180 TPT-------FIGDLAHIIGRLMTTDFYGTYHITNSGYCSLYSWG-------LEVVRALK 225 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + P Y+ LD + +AN IR W++ + + LV+ Sbjct: 226 LNVNIKEVTLEHQSGLVRIPEYTVLDNNLVANKLGIRPRGWRKALNSYLVD 276 >gi|187736304|ref|YP_001878416.1| dTDP-4-dehydrorhamnose reductase [Akkermansia muciniphila ATCC BAA-835] gi|187426356|gb|ACD05635.1| dTDP-4-dehydrorhamnose reductase [Akkermansia muciniphila ATCC BAA-835] Length = 301 Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/292 (25%), Positives = 138/292 (47%), Gaps = 21/292 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G++ L++ + +E+++ GR DL LS ++N AA Sbjct: 3 RTLVFGADGRVGSRLAAYLEEHGLEVVKCGRGFCDLKDLSALKRVLLSSGATHVVNCAAV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + ++ D+PE A +NA +A+ G+ I++STDYV DG R E P Sbjct: 63 SGLEACLDDPETAHCVNAMAPEMMARICRLEGMRFIHLSTDYVLDGRRRGLKTEEGKCRP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVC 176 +N+YG+SKL E +V + +I R +WV FG+ +F +LR A +R ++ V Sbjct: 123 VNVYGESKLEAEFRVREEMPDALIARVSWV---FGNPERPSFPEMVLRRAMKREPLAAVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D++ PT + + +A+ ++ G+ H+ G PVSW +A + + + Sbjct: 180 DKWSMPTWVEDLCAWLRFLAY------ESGASGVLHLCQSGEPVSWHSYAVAVLKCAVKH 233 Query: 237 G-----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 G P ++ + +Q + RP ++ + +L++ + ++E + Sbjct: 234 GLLPSLPPVAE--QKLDEQAGFRDARPRHTAMSSERLSSLMKQPVRAYEEAI 283 >gi|153000000|ref|YP_001365681.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] gi|151364618|gb|ABS07618.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] Length = 381 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 62/299 (20%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +++ + R +D+ + A+ F + P +IN AAY AVD AE + A +NA G Sbjct: 64 LKLYALSRSQLDITDTANIAAVFDQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPEL 123 Query: 84 IAKAADSIGIPCIYISTDYVFDG------------------------------------- 106 +A+ G +++S+DYVF G Sbjct: 124 LAQQCWLSGARLLHVSSDYVFGGQAVCGIAHAAERAVCDARESGVEQHQNPDLAPNSNPN 183 Query: 107 -LSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 L R P E PL+ YGKSKL GE KV A + I+RT+W+Y G NF+ +ML Sbjct: 184 HLPR-PFVELDAPEPLSTYGKSKLLGELKVVAVLGDGATIVRTSWLYGQNGHNFVNTMLN 242 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L + + + V+ DQ G PT + +A+ I Q+ +++ G+FH +A G SW + Sbjct: 243 LMRTQPSLQVIADQIGCPTWSDALAQVIWQL---VVQQCS----GVFHYSAQ-GQCSWYE 294 Query: 225 FAEYIFWESAERG--------GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANT 271 FA I ++ P + + + KQ + A RP+YS L KL +T Sbjct: 295 FACEIQRQALALNLLSLPVVIQPITSAH--YAKQALNRGVNLAKRPSYSVLSSGKLRST 351 >gi|289678442|ref|ZP_06499332.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 161 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 87/153 (56%), Gaps = 6/153 (3%) Query: 143 VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL-IE 201 +ILRT+WVY+ G+NF +MLRLA ER ++VV DQ+G PT A IA QI H + + Sbjct: 8 LILRTSWVYAARGNNFAKTMLRLATERDSLNVVADQYGAPTGAELIADVTAQILHRVRAD 67 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS----KVYRIFTKQYPTKAHR 257 + +L GI+H+ A G SW FA+++ +A G ++ I T+ YP A R Sbjct: 68 QNPAALAGIYHLAA-AGETSWHGFAQFVLEHAALNGVALKVAPDQIGAIPTEAYPVPAPR 126 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S L +KL +++ +W++G + +L I Sbjct: 127 PRNSRLALAKLETAFQLKMPSWQQGAQRMLDEI 159 >gi|162451327|ref|YP_001613694.1| hypothetical protein sce3055 [Sorangium cellulosum 'So ce 56'] gi|161161909|emb|CAN93214.1| hypothetical protein with NDP-sugar oxidoreductase domain [Sorangium cellulosum 'So ce 56'] Length = 729 Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 19/269 (7%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G G + ++ + +C ++ + +GR ++D+ P +P ++N A + Sbjct: 451 LITGAKGTLGRAFARLCALRGLPHRTIGRDEMDIADPASVERALDRLAPWAVVNTAGFVR 510 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE EP NA G +A A + S D VFDG R+P E P PLN Sbjct: 511 VDEAEREPHRCERENALGPAVLAIACRRRDARLVTFSADLVFDGAQRSPYVETDPARPLN 570 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLRLAKERREISVVCDQ 178 +YG+SK E V + +++RTA + FG +NF+ + LR E R D Sbjct: 571 VYGRSKATAEWNVLAILPEALVVRTA---AFFGPWDEANFVGAALRALGEGRSFHAADDV 627 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT + A + + LI+ RGI+H+ A+ SWA+ A +A Sbjct: 628 IVSPTYVPDLVHATLDL---LIDGE----RGIWHL-ANRDATSWAELASR---SAALARV 676 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 P +++ R ++ A RP YS L + Sbjct: 677 PATRLVRCPSRALGLAAPRPRYSALGSGR 705 >gi|255324210|ref|ZP_05365332.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose reductase [Corynebacterium tuberculostearicum SK141] gi|255298726|gb|EET78021.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose reductase [Corynebacterium tuberculostearicum SK141] Length = 451 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 145/283 (51%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ ++L + + D E D D+ P + + +S IIN AAY Sbjct: 176 RILVTGANGQLGRALKRL-LTDAEF--CSHADFDITDPPE--RNWKQYS--AIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE++ A+++NAE +A+ A I +++S+DY+FDG + +E P+ PL Sbjct: 229 DVNGAENDRAAAWAVNAEAPARLARIAAENQITLVHVSSDYIFDGANEVHTEEELPS-PL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AG+ + +YVI RT+WV+ G NF+ +M RLA + E V+ DQ G Sbjct: 288 SAYGASKAAGDTAAQTAPQHYVI-RTSWVFGD-GENFMSTMRRLATQGVEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I+ + NSD G+++++ G V + A +F G + Sbjct: 346 PTFAEDLAKGIVHLL-----NSDADY-GVYNLSNSGDTVGRDEIAMAVF---IGLGHDPA 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T + W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFKPQNWR 438 >gi|284997404|ref|YP_003419171.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] gi|284445299|gb|ADB86801.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] Length = 274 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+IG +GQ+ LS + DV I+V G +DL F + PDV Sbjct: 1 MRILLIGASGQLGLELSEVLKGDV--IKVYNTKEVQGGYKLDLTNYLAVKDFIVKKKPDV 58 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E E AF +NAE I +A+ + I+ISTDYVFDG + Sbjct: 59 IINTASLTDVDKCETEKGEAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDGEKGLYKE 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E P NP+N YG +KL GE SY ++ VI RT+ V+ G F + + + KE +E+S Sbjct: 119 EDLP-NPINYYGLTKLLGETYALSYDDSLVI-RTSGVFRHKG--FPIYVYKTLKEGKEVS 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI + LI+ T GI ++ G VS D A I E Sbjct: 175 AFKGYY-SPISARKLAEAISE----LIDYRKT---GILNVA--GERVSRVDLAIKI-KEK 223 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V + A RP S LD SK ++ + E +R +++ Sbjct: 224 FNLPGWVKEVDNVM----GWIAKRPFDSSLDISKAKRILSVDFYSLDENLRYMVI 274 >gi|256371534|ref|YP_003109358.1| dTDP-4-dehydrorhamnose reductase [Acidimicrobium ferrooxidans DSM 10331] gi|256008118|gb|ACU53685.1| dTDP-4-dehydrorhamnose reductase [Acidimicrobium ferrooxidans DSM 10331] Length = 286 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 17/286 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G GQ+ + L + E++ + R +D+ + + P I+N AA Sbjct: 4 RIVVLGAGGQLGRRLVRAFERTSAAEVVGLDRRALDVTERVAVHGAVDALRPRWIVNAAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD E E E A +NA + +AA+ G +STDYVFDG + P E N Sbjct: 64 MTAVDACEREVERAVRLNALAVRWLVEAAERAGARVCQVSTDYVFDGTATRPYTEADQPN 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG +KL GE ++ ++ V RT+W+ S L ++ RL + + V DQ Sbjct: 124 PMSVYGLTKLQGERELRPGIDSCV--RTSWLMSADDRCMLGTIDRLRRGPGPLRFVEDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+P+ A +A I+++ + G+ H+T D G SW D A G Sbjct: 182 GSPSFADDVALGIVELVRREVT-------GVIHVTND-GQASWYDVAREALRAF---GDD 230 Query: 240 YSKVYRIFTKQYPTK--AHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V I T Q A RPA+S L A + W+E + Sbjct: 231 PHRVEPIPTTQLAGSFVAPRPAFSVLAGVVRAAVGLEPLRPWQEAL 276 >gi|326799699|ref|YP_004317518.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] gi|326550463|gb|ADZ78848.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] Length = 306 Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 111/235 (47%), Gaps = 29/235 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRP-------------DIDLLKPKDFAS 44 + LV G+NG + Q ++ + +Q E I R D+D+ + A Sbjct: 3 RLLVTGSNGLLGQKITDILLQGQFPGFEYIASSRGSDRFGTSSRYRYLDLDITHHEQVAK 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 ++ PD+IIN AA VD E EPE ++ +N + + I I++STD+VF Sbjct: 63 AIETYRPDIIINTAAMPNVDACEREPEKSYEVNVVAVAHLIAVCERKNIHLIHLSTDFVF 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLL 160 DG P +E NP+N YGK KLA EE + T + I+RT VY + SN +L Sbjct: 123 DG-EEGPYEEEDIPNPVNTYGKHKLAAEELIQKATCPWAIVRTILVYGVLRDMSRSNIVL 181 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + + I VV DQ+ PT A +A+A + IA + G++H++ Sbjct: 182 WAKGALENGQSIRVVNDQWRMPTLAEDLAKACLTIA-------ERKATGMYHISG 229 >gi|311741017|ref|ZP_07714842.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303819|gb|EFQ79897.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035] Length = 451 Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 89/283 (31%), Positives = 146/283 (51%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ ++L + + D E+ D D+ P + + +S IIN AAY Sbjct: 176 RILVTGANGQLGRALKRL-LADAELCT--HADFDITDPPE--RNWKQYS--AIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE++ A+++NAE +A+ A + +++S+DY+FDG + +E P+ PL Sbjct: 229 DVNGAENDRAAAWAVNAEAPARLARIAAENQLTLVHVSSDYIFDGTNEVHTEEELPS-PL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AG+ + +YVI RT+WV+ G NF+ +M RLA + E V+ DQ G Sbjct: 288 SAYGASKAAGDTAAQTAPQHYVI-RTSWVFGD-GENFMSTMRRLANKGVEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I+ + NSD G+++++ G V + A +F G + Sbjct: 346 PTFAEDLAKGIVHLL-----NSDADY-GVYNLSNSGDTVGRDEIAMAVF---IGLGHDPA 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T + W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFKPQNWR 438 >gi|289678441|ref|ZP_06499331.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 134 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 5/134 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLVRLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLASEAAALGAWLIHYSTDYVFDGSGDQQWRED 120 Query: 116 SPTNPLNIYGKSKL 129 + T PL++YG+SKL Sbjct: 121 AATGPLSVYGRSKL 134 >gi|119026526|ref|YP_910371.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] gi|118766110|dbj|BAF40289.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 476 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 37/301 (12%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---I 54 K LV+G+ G++ +++ S +++ E D D D AS+ + D+ I Sbjct: 192 KTLVLGSKGKLGRAIREYAESHSLENFEY-----HDADTFDISDTASY-ENIDWDLYGTI 245 Query: 55 INPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 IN AAYT+VD AE PE A++IN G +AK A I ++IS+DYVFDG L Sbjct: 246 INAAAYTSVDGAE-TPEGRKAAWTINVRGVRNLAKIATEHRITLVHISSDYVFDGTLQFH 304 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 DE F+ PL++YG++K AG+ V + +Y+I R++W+ G NF+ ML LA+ Sbjct: 305 KEDENFA---PLSVYGQTKAAGDALVENVPQHYLI-RSSWIIGE-GRNFVTRMLDLAQSG 359 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 DQFG T +A AI + NS+ G ++MT G VSW D A+ I Sbjct: 360 ATAEAPNDQFGRLTFTDDMAGAIFHLL-----NSNAPY-GTYNMTGSGRVVSWFDLAQII 413 Query: 230 FWESAERGGPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 F A SK+ ++Y + A RP LD SK+ + + + W+ + + Sbjct: 414 F---AAANADNSKIIANSVEEYAKENNAALRPHNCSLDLSKIEDA-GYQPADWETSLHDY 469 Query: 287 L 287 L Sbjct: 470 L 470 >gi|118431352|ref|NP_147762.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1] gi|116062675|dbj|BAA80165.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1] Length = 300 Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 89/312 (28%), Positives = 139/312 (44%), Gaps = 41/312 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 MK LV G G + +L ++ ++ ++L P F Sbjct: 1 MKLLVTGGTGLLGYNLVQQLLKKGYSVYPTYNKNTPFKLAGARWSKVNLEDPSQLTQLFR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +I+ AAYT VD E E A+ IN + +A+ A G IY+STDYVFDG Sbjct: 61 DIKPDAVIHTAAYTDVDGCELHRERAYRINFLASMTVARLAARHGSLLIYVSTDYVFDGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSI-------FGSNF 158 +E +P NP+N YG SKL GE S + N +++R + +Y FG N Sbjct: 121 KGMYREEEAP-NPINYYGLSKLLGEVATLSAMDKENVLVVRVSGLYGYSPTGKRNFGINV 179 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 L +LR E+ DQ+ +PT ++R +I + + +RG+ H+ G Sbjct: 180 LEKLLR----GEEVRAFYDQYLSPTYTYFLSRRLIDVL-------EREIRGVLHLA--GE 226 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 +S +FA+ I + G + I K+ A RP S LD + +A + + + Sbjct: 227 RLSRLEFAQLI---AKVLGADAELIKPISMKEANLPARRPRDSSLDTT-MAKKLGLELPS 282 Query: 279 WKEGVRNILVNI 290 +E V++ VNI Sbjct: 283 QEESVKH-FVNI 293 >gi|256544657|ref|ZP_05472029.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus vaginalis ATCC 51170] gi|256399546|gb|EEU13151.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus vaginalis ATCC 51170] Length = 283 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 11/226 (4%) Query: 5 VIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G +G++ +L + + EII + ++D+ K ++ F P +IIN + T Sbjct: 8 ITGAHGRLGSTLVRYLDPLEAEIIATDKDEVDITKQEEVNLFVDRNRPKIIINCSGITNR 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E NP + Sbjct: 68 LKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEIDKANPNTV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSK GEE V ++ + Y I+R + +YS +N + S++ AK + V ++G+PT Sbjct: 128 YGKSKFLGEEFVKNFADRYFIVRVSRLYSK-ENNLVESIIEQAKNGI-VKVPKSRYGSPT 185 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 SA ++++ +I I T+ GI+H + + G S+ FA+ I Sbjct: 186 SAYELSKFLISIMG-------TNAYGIYHASCE-GTCSFRAFAQKI 223 >gi|311063528|ref|YP_003970253.1| RmlC/RmlD dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum PRL2010] gi|310865847|gb|ADP35216.1| RmlC/RmlD dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum PRL2010] Length = 476 Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 27/297 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---IINPA 58 + +V G+NG++ +++ + ++ D D D A + + D+ IIN A Sbjct: 191 RTMVFGSNGKLGRAIRRYA-ESHDLRGFEYHDTDTFDIAD-AEAYAAIDWDLYGTIINAA 248 Query: 59 AYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDE 114 A+TAVD+AE + + A+ N +G +A+ A I ++IS+DYVFDG T +E Sbjct: 249 AFTAVDEAETTEGRKNAWRTNVQGVKNLARIAAEHRITLVHISSDYVFDGTKELHTEDEE 308 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F+ PL++YG++K AG+ V + +Y +LR++WV G NF+ ML LA+ Sbjct: 309 FA---PLSVYGQTKAAGDALVENVPQHY-LLRSSWVIGE-GRNFVTRMLGLAQNNAHAEA 363 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG T +A+AI + +S+ S G ++MT G SW D A +F + Sbjct: 364 PSDQFGRLTFTDDMAKAIFHLL-----DSNASY-GTYNMTGSGRIASWYDIARLVFQTA- 416 Query: 235 ERGGPYSKVYRIFTKQYPTKAH---RPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G + +Y + H RP LD SKL T W++ + L Sbjct: 417 --GVDPDTITANSVAEYAREHHAAMRPQNCSLDLSKLEAT-GYHPQNWEQSLTTYLA 470 >gi|217974037|ref|YP_002358788.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] gi|217499172|gb|ACK47365.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] Length = 389 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 130/306 (42%), Gaps = 68/306 (22%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +E+ + R +D+ + A+ F + P +IN AAY AVD AE + A +NA G Sbjct: 64 LELYALSRSQLDITDAANIAAVFDQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPEL 123 Query: 84 IAKAADSIGIPCIYISTDYVFDG------------------------------------- 106 +A+ G +++S+DYVF G Sbjct: 124 LAQQCLLSGARLLHVSSDYVFGGQAVCEIAHAAERVVCDARESGVEQHQNPDSASNSNSN 183 Query: 107 ---------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGS 156 L R P E PL+ YG SKL GE++V + + I+RT+W+Y G Sbjct: 184 PNPNPNQVHLPR-PFVELDAPEPLSAYGTSKLLGEQRVVAVLGDCATIVRTSWLYGQDGH 242 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +ML L + + + V+ DQ G PT + +A+ I + G+FH +A Sbjct: 243 NFVNTMLNLMRTQSSLQVIADQIGCPTWSDALAKVIWLLVMQ-------QRSGVFHYSAQ 295 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRI-------FTKQYPTK----AHRPAYSCLDC 265 G SW +FA I A S+ I +TKQ + A RP+YS L+ Sbjct: 296 -GQCSWYEFASEIQ-RQALALNLLSQPVDIQPITSADYTKQALNRGVNLAKRPSYSVLNS 353 Query: 266 SKLANT 271 KL +T Sbjct: 354 GKLRST 359 >gi|325963884|ref|YP_004241790.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans Sphe3] gi|323469971|gb|ADX73656.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans Sphe3] Length = 482 Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 144/276 (52%), Gaps = 20/276 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAY 60 K LV+G +GQ+ ++L + D GR D DL F++ + ++S IIN AAY Sbjct: 191 KTLVVGADGQLGKALRKLYEGDSSFEFAGRGDFDLASDSAFSTMSWKNYS--TIINAAAY 248 Query: 61 TAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVD AE + A+S+N +A+ A + +++S+DYVFDG + T DE Sbjct: 249 TAVDAAETDAGRAAAWSVNVAAVARLARVAVEYNLTLVHVSSDYVFDGTA-TRHDEAEIF 307 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG++K AG+ V+ +Y++ RT+WV G+NF+ +M LA E SVV DQ Sbjct: 308 TPLGVYGQTKAAGDAVVSVVPRHYIV-RTSWVIGE-GNNFVRTMAALAGRGIEPSVVNDQ 365 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG + IA I H L +D G ++++ DG P SWAD A ++ G Sbjct: 366 FGRLSFTEDIASG---IRHLLESGADY---GTYNLSNDGPPQSWADIASDVY---ELVGR 416 Query: 239 PYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 + V + T++Y A RP S L +KL +T Sbjct: 417 SRASVTGVSTEEYFRDKAAAPRPRNSVLTLTKLKST 452 >gi|330834784|ref|YP_004409512.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] gi|329566923|gb|AEB95028.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] Length = 300 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 20/243 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K + PDV+I+ AA T VDK E++ +A +N + IAK+++ G Sbjct: 45 DLSKLDNVRKIVSEIKPDVVIHAAALTNVDKCEEDKGLAKLLNVDVTREIAKSSNQHGSL 104 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--- 151 +Y+STDYVFDG+ +E P NP+N YG +KL GE +V +++++I RT+ Y Sbjct: 105 LVYVSTDYVFDGVKGNYREEDEP-NPINFYGLTKLQGEREVMENSSSFIIARTSTPYGSN 163 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + NF L +++ K +++VV DQ +PT A + + LIE S I Sbjct: 164 PASEKDNFALWLIKKLKNNEKVNVVTDQITSPTLNTSFALMLKE----LIE-SYKRYNFI 218 Query: 211 FHMTADGGPVSWADFA---EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 H+T D VS +F+ +F + E P + + KA RP S L+ K Sbjct: 219 IHLT-DASQVSRYEFSVKLAEVFESNKELITPTT------MSEIKWKAKRPKNSSLNVEK 271 Query: 268 LAN 270 N Sbjct: 272 ANN 274 >gi|284992709|ref|YP_003411263.1| dTDP-4-dehydrorhamnose reductase [Geodermatophilus obscurus DSM 43160] gi|284065954|gb|ADB76892.1| dTDP-4-dehydrorhamnose reductase [Geodermatophilus obscurus DSM 43160] Length = 298 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 87/271 (32%), Positives = 132/271 (48%), Gaps = 18/271 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSF------SPDVII 55 LV G GQ+ L ++ + +GR ++DL + + + V++ Sbjct: 11 LVTGARGQLGGDLLAVLAGRPGDPVTALGRAELDLTDERRVREVVRGWLDGVRGARPVVL 70 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVD AE + + A +N G +A+ G +++STDYVFDG + P Sbjct: 71 NAAAYTAVDAAETDEDTALLVNGRAPGWLAEELAGRGR-LVHVSTDYVFDGEADQPYPVD 129 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +P P + YG++K AGE VA+ + ++RTAWVY G NF+ +M A + +SVV Sbjct: 130 APVAPRSAYGRTKAAGERAVAAAGGDATVVRTAWVYGRHGGNFVRTMAGRALDGAPVSVV 189 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT A +A ++ + + + H T D G VSW A ++ E Sbjct: 190 DDQVGSPTWAADLAAGLVALGAR-----PEPVPPVLHRT-DAGAVSWYGLARAVY---EE 240 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 G + V T +P A RPA+S LD S Sbjct: 241 VGADPALVAPTTTAAFPRPAPRPAWSVLDGS 271 >gi|223937497|ref|ZP_03629401.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] gi|223893848|gb|EEF60305.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] Length = 296 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 22/230 (9%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKP------KDFASFFLSFSPD 52 MK LVIG +G + + +++ I R + L P PD Sbjct: 1 MKVLVIGGSGLVGSHVLKAALAAGHQAIGTYRRSPLSGLVPLDAGDAAAAGKLLDQEKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +++ A +T VD ED+P+ AF+ NAE +A+ GI Y ST Y+FDGL P Sbjct: 61 AVVHAAGWTWVDGCEDDPKRAFAENAEQPANLARLCQKRGIHFTYFSTSYIFDGLD-GPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL-RTAWVYS--IFGSNFLLSMLRLAKER 169 DE + NP+N+Y +SK GE++V T+ +L R VY + NF + +E Sbjct: 120 DEDAKPNPINVYSQSKWEGEQRVQQETDGTALLPRIICVYGAEVQKKNFAYQVWNALREG 179 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 + +++ DQ G PT A IAR +I L+E + RG +H+ GGP Sbjct: 180 KALTLPSDQCGNPTYAGDIARWLI----TLLEKRE---RGPWHL---GGP 219 >gi|15922287|ref|NP_377956.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7] gi|145579383|pdb|2GGS|A Chain A, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose Reductase From Sulfolobus Tokodaii gi|145579384|pdb|2GGS|B Chain B, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose Reductase From Sulfolobus Tokodaii gi|15623076|dbj|BAB67065.1| 273aa long hypothetical dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7] Length = 273 Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 114/223 (51%), Gaps = 20/223 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LS + + E+I+V G +DL F + PDV Sbjct: 1 MRTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VDK E E E A+ INAE I +A I ++ISTDYVFDG + Sbjct: 61 IINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKE 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E P NP+N YG SKL GE + ++ +I+RT+ ++ F + + + KE + + Sbjct: 121 EDIP-NPINYYGLSKLLGE--TFALQDDSLIIRTSGIFR--NKGFPIYVYKTLKEGKTV- 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + +P SA ++A AI++ L+E T GI H+ + Sbjct: 175 FAFKGYYSPISARKLASAILE----LLELRKT---GIIHVAGE 210 >gi|220913157|ref|YP_002488466.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6] gi|219860035|gb|ACL40377.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6] Length = 474 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/274 (29%), Positives = 132/274 (48%), Gaps = 16/274 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAY 60 K LV+G +GQ+ ++L + + GR + DL + F + + ++S V Sbjct: 191 KVLVVGADGQLGKALREQYDGEARVEFAGRGEFDLAREDSFKNRNWKNYSAIVNAAAYTA 250 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++E+ A++IN +A+ A + +++S+DYVFDG SR E P P Sbjct: 251 VDAAESEEGRAAAWAINVTAVANLARTAVEHDLTLVHVSSDYVFDG-SRDNHGENEPLTP 309 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++K AG E VA + I+RT+WV GSNF+ +M LA + +VV DQ Sbjct: 310 LGVYGQTKAAG-EAVAGVVPRHYIVRTSWVIGE-GSNFVRTMASLAGRGIKPAVVNDQ-- 365 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T L R I +L+ + + G ++ + DG SWAD A ++ + G Sbjct: 366 --TGRLSFTRDIAAFISHLL--TTEAAYGTYNFSNDGPVKSWADIAADVY---EQVGASR 418 Query: 241 SKVYRIFTKQY---PTKAHRPAYSCLDCSKLANT 271 + V + T +Y A RP S L+ +K +T Sbjct: 419 TDVTGVTTAEYFKDKAAAPRPLKSALNLAKAHST 452 >gi|329766671|ref|ZP_08258214.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136926|gb|EGG41219.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 311 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 91/292 (31%), Positives = 130/292 (44%), Gaps = 41/292 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII-----------RVGRPDIDLLKPKDFASFFLSFS 50 K VIG +G + + C D E+ V +D+ P D + Sbjct: 4 KICVIGASGLLGYKIIHSC-NDYEVFGTYNQTQINHDHVHLIQLDITSPADCEKI-IEIQ 61 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N AA T VD E E A +N G I K A + ++ISTD +F G + Sbjct: 62 PDYIVNTAAITNVDYCEKYKEKAHLVNVIGTQNIVKIAKKLNCKLVHISTDGIFSG-NDL 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-------------N 157 E P NP+N YG++KL E V + ++Y+ILRT +Y N Sbjct: 121 NYKEDDPPNPVNYYGQTKLESENAVKTL-DDYLILRTNVLYGYVSKNIIKSRSNYLKPIN 179 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTAD 216 F L +L + ++I +V DQF PT A +A+ I+ I NLI G FH T D Sbjct: 180 FGLWILSELHKNKKIRIVNDQFSNPTLADNLAKIIMDCIKINLI--------GTFHST-D 230 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 VS F++ I + + G + + I K A RP+ +CLDCSK+ Sbjct: 231 LTCVSRLHFSKKI---AQKFGFSENLITEISLKDLNLLAPRPSKTCLDCSKI 279 >gi|154489857|ref|ZP_02030118.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC 43184] gi|154089299|gb|EDN88343.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC 43184] Length = 296 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/249 (30%), Positives = 112/249 (44%), Gaps = 15/249 (6%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + F PDV++N +A + D E E A++IN +A + G I++STD+V Sbjct: 59 ALFDHICPDVVVNCSALSVPDYCEQHREEAYAINVSAVENLAYCCEHQGSRLIHLSTDFV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG S E PLN YG +K GE+ VAS NY I+R VY ++L Sbjct: 119 FDGRSDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYGKALPGQHGNVL 178 Query: 164 RLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 +L K R +EI VV DQ+ TPT IA + ++ H T GI+H+ Sbjct: 179 QLVKNRLEAGQEIRVVADQYRTPTWVEDIADGVERLVH-------TDDSGIYHICG---- 227 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + AE + + G S + + T++ RP S L K R T Sbjct: 228 AEYLSIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIEKAKRELGYRPHTL 287 Query: 280 KEGVRNILV 288 +EG++ + + Sbjct: 288 EEGLKEMKI 296 >gi|325479881|gb|EGC82966.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii ACS-065-V-Col13] Length = 287 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 11/229 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G++G++ ++ D EI+ + ++D+ K+ ++F P +I+N + Sbjct: 8 KIWITGSHGRLGSTIYRYLDPIDAEIVATDKNEVDITNQKEVSTFIERLRPTIIVNASGL 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ E P+ A+ +NA GA IA AA+ + +ST VFDG + P E P Sbjct: 68 TKKNECEKNPDEAYLLNAIGAKNIAIAANRHKAKIVQLSTGDVFDGNTINPYKEIDTPRP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSK GEE V +++N Y I+R + +YS S F+ +++ AK + ++ + D+ Sbjct: 128 TTVYGKSKFLGEEFVRNFSNYYYIIRVSRLYSRENS-FVENIIDQAK-KGKVVMPKDRIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +PT A ++++ +I++ T+ G +H + + G S DFA+ + Sbjct: 186 SPTPAFELSKFLIELIK-------TNNYGTYHASCE-GYCSHKDFAQEV 226 >gi|302335388|ref|YP_003800595.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084] gi|301319228|gb|ADK67715.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084] Length = 481 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 93/287 (32%), Positives = 137/287 (47%), Gaps = 37/287 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF----FLSFSPDVIINP 57 + LV G NGQ+ +++ + + +++ DID D S+ + ++ +IN Sbjct: 189 RTLVTGCNGQLGRAVRQL-ANERKLVGFDYCDIDTFDFSDIRSYDDIPWDAYG--AVINC 245 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AYTAVD+AE PE + + NA G + + GI +++S++YVFDG SR DE Sbjct: 246 GAYTAVDRAE-SPEGRVMCWKANALGPSLLTQTCARHGITLVHVSSEYVFDG-SRELHDE 303 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------AK 167 PL++YG+SK AG+ + S Y I+RT+WV G NF+ +M RL A Sbjct: 304 DETYAPLSVYGQSKAAGDIAL-SCCPKYYIVRTSWVIGD-GHNFVKTMARLSDRCADPAD 361 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGPVSWADFA 226 +SVV DQ G PT A ++AR I + DT GI++++ G SW D A Sbjct: 362 SLDSVSVVNDQLGRPTFADELARGIFWLL-------DTRPAYGIYNLSNAGRIASWYDIA 414 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKL 268 F R G V+ T Y A RP S L K+ Sbjct: 415 RRTF---EMRNGNGHCVHATSTADYYAGSEAPVACRPRNSALSLEKM 458 >gi|115374682|ref|ZP_01461960.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|310820809|ref|YP_003953167.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|115368350|gb|EAU67307.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|309393881|gb|ADO71340.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] Length = 303 Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 16/213 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP-----------DIDLLKPKDFASFFLS 48 M+ +V G+NG + + ++ + E++ +GR +DL D + S Sbjct: 1 MRFVVTGSNGLVGSRVCALLEKAGHEVVGLGRGARRTGGAHRYIPVDLTLEADVLTAIES 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P+ II+PA+ T VD E PE+A++ N A A+AK A +G +++STDYVFDG Sbjct: 61 AAPEAIIHPASMTEVDACERAPELAYAANVTAAMAVAKGARKVGAHLVHVSTDYVFDG-D 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRL 165 + P DE + NP +Y +K GE+ S+ I RTA VY NF ++ Sbjct: 120 QGPYDEEARANPRGVYALTKHMGEQAAKSFVPGCAIARTAVVYGWPPAGRPNFGAWLVGA 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 ++++ + + DQF +P+ A +A ++++ Sbjct: 180 LEKQQTVKLFEDQFVSPSLADSVAAMLVELGER 212 >gi|255533298|ref|YP_003093670.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] gi|255346282|gb|ACU05608.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] Length = 303 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%) Query: 4 LVIGNNGQIAQSLSS--MCVQDVEIIRVGR-------------PDIDLLKPKDFASFFLS 48 LV G+NG + Q ++ + +I + ++D+L P++ + Sbjct: 5 LVTGSNGLLGQKITERLLVTNQFGLIATAKGGNRFPVTEGYTYAEMDILDPENVKAVVEK 64 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + PD II+ AA T VD E E E+A+ +N E + + I +++STD++FDG + Sbjct: 65 YQPDAIIHTAAMTNVDTCEAEKELAYQLNVEAVKTLVSLCELHNIQLVHLSTDFIFDG-A 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P DE + NPL+ YG +KL EE + S T + ILRT VY I +++ AK Sbjct: 124 HGPYDELAAPNPLSYYGITKLEAEEVIKSSTCRWAILRTIIVYGIVSDMSRTNIVLWAKT 183 Query: 169 RRE----ISVVCDQFGTPTSALQIA 189 E I+VV DQ+ PT A +A Sbjct: 184 ALEKGSPINVVNDQWRMPTLAEDLA 208 >gi|156328608|ref|XP_001618961.1| hypothetical protein NEMVEDRAFT_v1g224653 [Nematostella vectensis] gi|156201079|gb|EDO26861.1| predicted protein [Nematostella vectensis] Length = 291 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 12/188 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DID+ + F + L P IIN AA T VD E++ E + +N + + I Sbjct: 41 DIDITNKELFIASILKIKPHYIINTAAMTNVDACENDKEGCYDLNVNVVENLIEVCQQIN 100 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I++STD++FDG+ ++ P NPL+ YGK+KL E+ V T N+ ILRT VY Sbjct: 101 THLIHLSTDFIFDGVKGNYTEDDEP-NPLSYYGKTKLISEKLVQDSTINFTILRTILVYG 159 Query: 153 IFG----SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + SN +L + + ++EI++V DQ+ TPT A +A IA L + D + Sbjct: 160 LVNDMSRSNIVLWVKESLENKKEITIVNDQYRTPTYAEDLA-----IACKL--SIDKNAT 212 Query: 209 GIFHMTAD 216 G+FH++++ Sbjct: 213 GVFHISSN 220 >gi|210633542|ref|ZP_03297811.1| hypothetical protein COLSTE_01728 [Collinsella stercoris DSM 13279] gi|210159137|gb|EEA90108.1| hypothetical protein COLSTE_01728 [Collinsella stercoris DSM 13279] Length = 254 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/236 (33%), Positives = 120/236 (50%), Gaps = 25/236 (10%) Query: 54 IINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 +IN AYTAVDKAE PE A+ NA G +A+ GI +++S+DYVFDG + Sbjct: 9 VINCGAYTAVDKAE-TPEGRVAAWRANAIGPALLARTCAEHGITLVHVSSDYVFDGTAEV 67 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL----- 165 ++ P +PL++YG+SK AG+ VA +Y I+R++WV G NF+ +M L Sbjct: 68 HAED-EPLSPLSVYGQSKAAGDLAVAGCPRHY-IVRSSWVIG-EGRNFVRTMKSLSDRVA 124 Query: 166 --AKERREISVVCDQFGTPTSALQIARAIIQI---AHNLIENSDTSLRGIFHMTADGGPV 220 A +++VV DQ+G T +A I+ + E S + G +++T G Sbjct: 125 DPADALDKVTVVDDQYGRLTFTRDMAEGILWLLGYREGGAEPSSPAPHGAYNLTGSGPVE 184 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANT 271 SWA A +F + G +V + T +Y A RP +S LD SK+ T Sbjct: 185 SWAQIAARVFDLANGNG---ERVVPVSTAEYYAGAEGAIAPRPVHSALDLSKIGVT 237 >gi|197120379|ref|YP_002140806.1| bifunctional glycoside hydrolase/dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] gi|197089739|gb|ACH41010.1| glycoside hydrolase and dTDP-4-dehydrorhamnose reductase, putative [Geobacter bemidjiensis Bem] Length = 730 Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 16/230 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L++G G + QS S +C + + + R +ID+ A+ F + P ++N A + Sbjct: 450 RILIVGKTGTLGQSFSRLCRHRGIPCHLLSRGEIDIASAASVATAFDRYEPWAVVNGAGF 509 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +D AE + F N G +A G+P + S+D VF+G RT E P +P Sbjct: 510 VRIDDAEGDASTCFRENTVGPAVLAAECARRGVPLMTFSSDMVFNGSKRTAYQERDPVSP 569 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVC 176 +NIYG+SK E +V ++LRT+ + FG NF+ LR + Sbjct: 570 INIYGQSKAEAERQVLKLYPGALVLRTS---AFFGPWDRYNFVTVTLRRLAAGETVEAAS 626 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 D +PT + A + +L+ + ++ GI+H++ + G VSWA+ A Sbjct: 627 DLVVSPTYIPDLVHAGL----DLLLDGES---GIWHLS-NAGAVSWAELA 668 >gi|172040149|ref|YP_001799863.1| hypothetical protein cur_0469 [Corynebacterium urealyticum DSM 7109] gi|171851453|emb|CAQ04429.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 392 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 156/321 (48%), Gaps = 43/321 (13%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD-------VII 55 +V+G GQ+ +L + + ++ +GR ++DL + + L + + V+I Sbjct: 77 VVLGAGGQLGTALVAGLADHAAPVVALGRAELDLTASDEECATALRAAIEQAGGRDVVVI 136 Query: 56 NPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-- 111 N AA+TAVD AED A +NA G +A+ A + G I++STDYVF G + P Sbjct: 137 NAAAWTAVDAAEDPANAAAVERVNATAPGMLAQVAAAQGAGFIHVSTDYVFSGEAGQPRA 196 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 E SP P+N YG++KLAGE V ++RTAWV+S G +FL +M LA+ Sbjct: 197 ASPEDSPA-PVNEYGRTKLAGERAV--LDAGGTVVRTAWVFSGPTGPGRDFLDTMAGLAE 253 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLI------ENSDTS--------------- 206 + VV DQ+G PT +A ++++A L E++ TS Sbjct: 254 RGVDPKVVDDQWGRPTFTGHLAAGLVELAVTLWRQRRAGEHTQTSVPSSGGSGDDARTPE 313 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 L + H T G +WA FA IF + G ++V RI T +YPT A RP LD S Sbjct: 314 LPRLLHATGSGEVTTWAGFAAAIFDAT---GHDPARVSRIPTAEYPTPARRPVGVYLDTS 370 Query: 267 KLANTHNIRISTWKEGVRNIL 287 + W++G+R L Sbjct: 371 CWEAAGLSPLPAWQDGLRAAL 391 >gi|312133747|ref|YP_004001086.1| rfbc [Bifidobacterium longum subsp. longum BBMN68] gi|311773025|gb|ADQ02513.1| RfbC [Bifidobacterium longum subsp. longum BBMN68] Length = 475 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 80/222 (36%), Positives = 109/222 (49%), Gaps = 19/222 (8%) Query: 53 VIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 IIN AAYTAVDKAE PE A+ N +G G +A+ I I+IS+DYVFDG S+ Sbjct: 243 TIINAAAYTAVDKAE-TPEGRKAAWQTNVKGVGNLARVCTEHRITLIHISSDYVFDG-SQ 300 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 E PL +YG++K AG+ V + +Y +LR++WV G NF+ M+ LA Sbjct: 301 ELHKEDEEFAPLGVYGQTKAAGDTLVENVPQHY-LLRSSWVIGE-GRNFVTRMIGLANNG 358 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 DQFG T +A AI + +S + G ++MT G VSW D A + Sbjct: 359 EHAEAPSDQFGRLTFTDDMAGAIFHLL-----DSGAAF-GTYNMTGSGRVVSWYDIASIV 412 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAH---RPAYSCLDCSKL 268 F G + + +Y + H RP LD SKL Sbjct: 413 F---KAVGADENNLVANSVAEYAREHHAALRPRNCSLDLSKL 451 >gi|227832078|ref|YP_002833785.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] gi|262184067|ref|ZP_06043488.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] gi|227453094|gb|ACP31847.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] Length = 454 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 26/278 (9%) Query: 2 KCLVIGNNGQIAQSLS----SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ ++L S + VE G D D+ P A + +S IIN Sbjct: 175 RILVTGANGQLGRALKKFLPSAGLGAVEF--CGHEDFDITNPP--ARPWKQYS--AIINC 228 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY V+ AED A+++NA +A+ A + +++S+DY+FDG ++ P Sbjct: 229 AAYNDVNGAEDNRAAAWAVNASAPAKLARIAAENNLTLVHVSSDYIFDGTEEVHSEDELP 288 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + PL+ YG SK AG+ + +YVI RT+WV+ G+NF+ +M LA + + SV+ D Sbjct: 289 S-PLSAYGASKAAGDTAAQTAPRHYVI-RTSWVFGD-GANFMATMRSLANKGVKPSVIHD 345 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT A +A+ II + E G+++++ G V + A +F G Sbjct: 346 QRGRPTFAEDLAKGIIHLLKTEAE------YGVYNISNSGDVVGRDEIAMAVF---TGVG 396 Query: 238 GPYSKVYRIFTKQYPT----KAHRPAYSCLDCSKLANT 271 + V + T+QY +A RP S D SK+ T Sbjct: 397 QDPADVTPVSTEQYREIAGPEAPRPKESTFDLSKIEAT 434 >gi|330947510|gb|EGH48102.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. pisi str. 1704B] Length = 130 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 3/122 (2%) Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL GE+ + + +ILRT+WVY+ G+NF +MLRLA ER ++VV DQ+G P Sbjct: 1 VYGRSKLMGEQAIQASGAKALILRTSWVYAARGNNFAKTMLRLATERDSLNVVADQYGAP 60 Query: 183 TSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T A IA QI H + + + +L GI+H+ A G SW FA+++ E A R G Sbjct: 61 TGAELIADVTAQILHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVL-EHAARNGVAL 118 Query: 242 KV 243 KV Sbjct: 119 KV 120 >gi|110636916|ref|YP_677123.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC 33406] gi|110279597|gb|ABG57783.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC 33406] Length = 298 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 27/235 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFASF 45 MK L+ G+NG + Q L S+ EI + R +I D+ ++ Sbjct: 1 MKILITGSNGLLGQKLVSLLYLKPEITLIATARGANRDEIYEDYIYESMDITSEENVLKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD +I+ AA T VD+ E E N I KA +G +++STD++FD Sbjct: 61 FRKHKPDAVIHTAAMTHVDQCELNKEACVDQNITSVKHIVKACKEVGAFLLHVSTDFIFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLS 161 G +R P+ E NP+N YG +K E+ V + + I RT V+ + SN +L Sbjct: 121 G-TRGPLTEEEIPNPVNYYGWTKWEAEKAVENSGLKWAIARTVLVFGVVQDMSRSNIVLW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + ++++EI+VV DQ+ TPT A +A I N E GIF+++ + Sbjct: 180 VKNNLEQKKEINVVNDQWRTPTLAEDLAMGCWLIVKNQAE-------GIFNISGE 227 >gi|312129515|ref|YP_003996855.1| dtdp-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM 17132] gi|311906061|gb|ADQ16502.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM 17132] Length = 296 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 18/210 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------------IDLLKPKDFASFFL 47 MK L+ G+NG + Q L +II R + +D+ P+ + + Sbjct: 1 MKILITGSNGLLGQKLVQQLAGKGDIIATARGENRLPLSDGYRYRSLDITDPEAVNAVII 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD II+ AA T VD+ E + E + +N + KAA+ G +++STD++FDG Sbjct: 61 EETPDAIIHTAAMTNVDQCETDKEECWKLNVHATEYLVKAAEKTGSYFLHVSTDFIFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSML 163 P E + NP++ YG SK A E+ V S + N+ I RT VY I SN +L + Sbjct: 120 KEGPYAEDAEPNPISFYGWSKFAAEKVVQSSSLNWSIARTVLVYGIAHDMSRSNIILWVK 179 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAII 193 + + I VV DQ+ TPT A +A I Sbjct: 180 GSLEAGKTIKVVNDQWRTPTLAEDLAAGCI 209 >gi|70607434|ref|YP_256304.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM 639] gi|68568082|gb|AAY81011.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM 639] Length = 282 Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 33/301 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID---LLKPKDF---ASFFLSFSPDVI 54 M L+IG +GQ+ Q L + ++D + RP I+ L +D+ + P+VI Sbjct: 1 MVTLIIGGSGQLGQELGKL-IKDSILTFSSRP-IEGGIYLDTRDYIRVEDLIMKTKPEVI 58 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN +A T VDK E + A S+N+ + +AA + ISTDYVFDG +R +E Sbjct: 59 INTSAITDVDKCEVDRINAHSVNSLAVKHMVRAASITKSYFVQISTDYVFDG-NRGNYNE 117 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 NPLN YG +KL GE SY + VI RT+ +Y NF L +L+ ++ ++ Sbjct: 118 DDLPNPLNYYGLTKLLGETYSLSYDYSLVI-RTSGIYGSNKENFPLYVLKSLEKGSKVRA 176 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI----- 229 V D + +P + Q+A AI+Q+ LR + G +S D A I Sbjct: 177 VWDMYYSPINVKQLAEAIVQL---------LPLRKTGILNIAGDRISRYDLALKIAKMSS 227 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E+ Y ++ +A RP S LD S + ++ +S +EG+R ++ + Sbjct: 228 LNENLIEAASY--------EEMSWRAKRPKDSSLDSSTVKKYVSVNLS-LEEGLRRLIND 278 Query: 290 I 290 + Sbjct: 279 V 279 >gi|320334071|ref|YP_004170782.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] gi|319755360|gb|ADV67117.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] Length = 723 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 22/268 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G G + Q+ + C ++ + + R +D+ + P +IN A Y Sbjct: 439 RLLITGATGTLGQAFARACAIRGLPYHLLDRRALDITDEASIHAALDLHQPWAVINTAGY 498 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE +P N G +A A G+P + S+D VFDG P E NP Sbjct: 499 VRVDDAETDPRNTRE-NTHGPHLLALACAQRGVPLMTFSSDLVFDGTKGAPYVESDAVNP 557 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVC 176 LN YG+SK E V + +++RT+ + FG NF ++R + R + Sbjct: 558 LNAYGRSKADAERLVLQAAPDALVIRTS---AFFGPWDPYNFAAYVVRELQAGRTVRAAG 614 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ +PT + A + + LI+ RGI+H+ A+ G +SWADFA + A Sbjct: 615 DQVVSPTYVPDLTCAALDL---LIDGE----RGIWHL-ANAGALSWADFARRV----ARV 662 Query: 237 GGPYSK-VYRIFTKQYPTKAHRPAYSCL 263 GG + V + T KA RPA S L Sbjct: 663 GGLSERLVEAVSTADLHQKAARPAASAL 690 >gi|227502493|ref|ZP_03932542.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49725] gi|227076766|gb|EEI14729.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49725] Length = 461 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + +++ E DI + + + + IIN AAY Sbjct: 176 KILVTGANGQLGRALKRV-LKNAEFCTHAEFDITNPPQRQWKQY------EAIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AED+ A+++NAE +A A + +++S+DY+FDG ++ P+ PL Sbjct: 229 DVNGAEDDRAAAWAVNAEAPAKLAHIAAENQLTFVHVSSDYIFDGSKELHTEDEIPS-PL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AGE + +YV+ RT+WV+ G NF+ +M RLA+ +E V+ DQ G Sbjct: 288 SAYGASKAAGETAAQTAPQHYVV-RTSWVFGD-GPNFIATMRRLAEADKEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I + E GI++++ G V + A +F G S Sbjct: 346 PTFAEDLAKGIAHLLRTRPE------YGIYNISNSGDTVGRDEMAMSVF---IGLGHDPS 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANT 271 +V + T+QY +A RP S L K+ T Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT 430 >gi|169836078|ref|ZP_02869266.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [candidate division TM7 single-cell isolate TM7a] Length = 281 Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 25/295 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 ++G NGQ+ ++L Q E ++D+ + SF S +++N AA+T Sbjct: 5 NIFIVGANGQLGRALRQ---QYPEARFADIDEMDITDRQSVESFDWS-GISIVLNAAAFT 60 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 VD AE PE A+ +NA + + + + ++IS+DYVFDG ++ P E Sbjct: 61 NVDGAE-TPEGRVAAWKVNASAVANLTRVCRTHNMTLVHISSDYVFDG-TKEPHFENEDF 118 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL++YG SK AG+ V +N+ +LRT WV G NF+ +ML LA++ +VV DQ Sbjct: 119 SPLSVYGASKAAGDLLVEQL-DNFYLLRTTWVIGE-GKNFVRTMLGLAEKNISPTVVHDQ 176 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G L R +++I +L+ S + G ++ T DG SWAD IF E A G Sbjct: 177 IG----RLTFTRELVRIIDHLL--STQAPFGTYNATNDGPLESWADITRRIF-ELA--GH 227 Query: 239 PYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V T +Y A RP S + KL +T W +++ ++N Sbjct: 228 NDLTVTNTTTAEYFADKDGIAPRPLGSDMSLDKLHST-GFTSHDWTHDLKDYILN 281 >gi|325847005|ref|ZP_08169831.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480977|gb|EGC84022.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 229 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 5 VIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G +G++ +L + + EII + ++D+ ++ F P +IIN + T Sbjct: 8 ITGAHGRLGSTLVRYLDPLEAEIIATDKEEVDITNQEEVNLFVDRNRPKIIINCSGITDR 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E NP ++ Sbjct: 68 LKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEIDKANPNSV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSK EE V + + Y I+R + +YS +N + S++ K I V ++G+PT Sbjct: 128 YGKSKFLAEEFVKDFADRYFIVRVSRLYSK-ENNLVESIIDQGKNGL-IKVPKSRYGSPT 185 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 SA ++++ +I I DT+ G++H + + G S+ FA+ Sbjct: 186 SAYELSKFLISIM-------DTNAYGVYHASCE-GTCSFRAFAQ 221 >gi|212696874|ref|ZP_03305002.1| hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] gi|212676164|gb|EEB35771.1| hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] Length = 283 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 11/226 (4%) Query: 5 VIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G +G++ +L + + EII + ++D+ ++ F P +IIN + T Sbjct: 8 ITGAHGRLGSTLVRYLDPLEAEIIATDKEEVDITNQEEVNLFVDRNRPKIIINCSGITDR 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E NP ++ Sbjct: 68 LKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEIDKANPNSV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSK EE V + + Y I+R + +YS +N + S++ K I V ++G+PT Sbjct: 128 YGKSKFLAEEFVKDFADRYFIVRVSRLYSK-ENNLVESIIDQGKNGL-IKVPKSRYGSPT 185 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 SA ++++ +I I DT+ G++H + + G S+ FA+ I Sbjct: 186 SAYELSKFLISIM-------DTNAYGVYHASCE-GTCSFRAFAQKI 223 >gi|303244870|ref|ZP_07331197.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis IH1] gi|302484747|gb|EFL47684.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis IH1] Length = 304 Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 21/267 (7%) Query: 26 IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 I + + +D+ ++ +PD ++N AA T VD E E E+A+ NA + Sbjct: 45 INNINKHFVDITNENKIKETIITINPDFVVNTAAITNVDLCETEREVAYKTNALAVKYVG 104 Query: 86 KAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-I 144 +A + IP +ISTDYVFDG I E NP+N YG +K GE+ + ++ I Sbjct: 105 EACKKLNIPLCHISTDYVFDGEKGDYI-ENDRINPINYYGWTKAEGEKILNELNHDLTSI 163 Query: 145 LRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 +R + Y I NFL+ +L KE +++ V DQ+ TPT ++ I++I Sbjct: 164 VRISVPYCISPIKVNFLMWVLNTLKEGNKVNAVIDQWNTPTYVPELMEGIVKI------- 216 Query: 203 SDTSLRGIFHMTADGGPVSWADFA---EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + + G+ H G VS +FA IF + + P I + + KA+RPA Sbjct: 217 HEKEVNGLLHF-GGGEKVSRYEFALKVAEIFDLNKDLIKP------IPSSELGWKANRPA 269 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNI 286 + L K NI++ E ++ I Sbjct: 270 DTSLISKKSEKLLNIKLKKVDECLKEI 296 >gi|306835067|ref|ZP_07468110.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49726] gi|304569048|gb|EFM44570.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49726] Length = 461 Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + +++ E DI + + + + IIN AAY Sbjct: 176 KILVTGANGQLGRALKRV-LKNAEFCTHAEFDITNPPQRQWKQY------EAIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AED+ A+++NAE +A A + +++S+DY+FDG ++ P+ PL Sbjct: 229 DVNGAEDDRAAAWAVNAEAPAKLAHIAAENQLTFVHVSSDYIFDGSKDLHTEDEIPS-PL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AGE + +YV+ RT+WV+ G NF+ +M RLA+ +E V+ DQ G Sbjct: 288 SAYGASKAAGETAAQTAPQHYVV-RTSWVFGD-GPNFIATMRRLAEADKEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I + E GI++++ G V + A +F G S Sbjct: 346 PTFAEDLAKGIAHLLRTQPE------YGIYNISNSGDTVGRDEMAMSVF---IGLGHDPS 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANT 271 +V + T+QY +A RP S L K+ T Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT 430 >gi|326332007|ref|ZP_08198292.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Nocardioidaceae bacterium Broad-1] gi|325950145|gb|EGD42200.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Nocardioidaceae bacterium Broad-1] Length = 460 Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 139/276 (50%), Gaps = 22/276 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LVIG+NGQ+ ++L+++ E V ++D+ K A++ + +I+N AAYT Sbjct: 184 KTLVIGSNGQLGRALTAVFP---EADAVDLDELDISDEKAVAAWPWA-DYQLILNAAAYT 239 Query: 62 AVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 AVD AE D A++ NA +A+ A + ++ ST+YVFDG + T E P + Sbjct: 240 AVDVAETPDGRRTAWAANATAPALLARVATEHRLTLVHYSTEYVFDGTA-TEHTEDEPVS 298 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +Y +SK AG+ VA +Y ILRT+WV G NF+ +M LA++ +VV DQ Sbjct: 299 PLGVYAQSKAAGDIAVAGTARHY-ILRTSWVVGD-GKNFVRTMAALAEKGVSPTVVDDQI 356 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T +A A AH L + G+++ T G P SW D A +F S G Sbjct: 357 GRLTFTDTLAAA---TAHLLRSG---AAYGVYNCTNAGEPCSWRDIAAEVFSLSGRDG-- 408 Query: 240 YSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANT 271 + V T+ Y A RP S + KL T Sbjct: 409 -ADVGATSTEAYFAGKEGVAPRPLNSVMSLDKLTAT 443 >gi|333031141|ref|ZP_08459202.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] gi|332741738|gb|EGJ72220.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] Length = 299 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 11/184 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + ++ PDVII+ AA + + + E+ P A+S+N E I A + I Sbjct: 52 LDLTESGNVIAYIQKIQPDVIIHTAAISGIPQCEENPSQAYSVNVEAVKTIGTVAKKLAI 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I +STD+VFDG P E P+N YGK+KL E+ + + +Y I R A VY Sbjct: 112 HFIQLSTDFVFDGKREIPYTEEDIPAPINEYGKTKLEAEQWIQKHLTHYAIARVAVVYGK 171 Query: 154 FGSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 +++ + + + E+ +V DQ+ TPT I + I H LIE + +G Sbjct: 172 PKDGQHTNIVEIIQSKLSNNEELHLVSDQWRTPTYVGDICQGI----HLLIEKEE---KG 224 Query: 210 IFHM 213 IFH+ Sbjct: 225 IFHI 228 >gi|291540641|emb|CBL13752.1| RmlD substrate binding domain [Roseburia intestinalis XB6B4] Length = 178 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I G +D+ + + PDVI Sbjct: 4 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 63 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 64 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 123 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 F +P++ YGK+K GE+ V + + Y I RTAW+Y Sbjct: 124 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYG 161 >gi|170724953|ref|YP_001758979.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] gi|169810300|gb|ACA84884.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] Length = 327 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 136/303 (44%), Gaps = 27/303 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV---------GRPDIDLLKPKDFASFFLSFSPD 52 + ++ G+ G + +++ Q E + + G +DL + + F PD Sbjct: 24 RVMITGSTGLLGRAVVKQLKQTDEHLLIATGFSRAETGIYKLDLTDEEAISEFIGVHQPD 83 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VII+ AA D +E PE A ++N GA+AKAA G IYISTDYVFDG + Sbjct: 84 VIIHCAAERRPDISEQSPEAALALNLGATGALAKAAKQQGTWLIYISTDYVFDG-TEPSY 142 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSNFLLSMLRLAKER 169 E NP+N YG+SKL GE+ + + +++ +LR +Y + +L +L + Sbjct: 143 SEADKPNPVNFYGESKLQGEQALLATASDFAVLRLPILYGEVEKIEESAVLVLLNQLLDS 202 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD---FA 226 +V +PTS IA AI Q+ ++ D L GI+H +A + A Sbjct: 203 TPQNVDNWAVRSPTSTQDIALAIEQMIGLHLKGED--LNGIYHFSAKQTMSKYQMLLVLA 260 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E +F ++E P S A RP L C +L +KEGV+ Sbjct: 261 E-LFELNSEHLTPISSPM--------DTAKRPHDCTLSCQRLTELGIASQIAFKEGVKES 311 Query: 287 LVN 289 LV+ Sbjct: 312 LVS 314 >gi|197105533|ref|YP_002130910.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] gi|196478953|gb|ACG78481.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] Length = 789 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 13/266 (4%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G G + ++L+ C + ++ R ++ L A+ P +IN A + Sbjct: 488 LIVGATGTLGKALARACEWRGIDYRLTSRAELSLDDADSIAAALDGCGPWAVINAAGWVR 547 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + NA+GA +A+ G+P + S+D VFDG + P E P PLN Sbjct: 548 VDEAEACAADCLAANADGAVRLARICAERGLPLVGYSSDLVFDGSAGRPYVESDPPAPLN 607 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK E +V + +++RTA +S F NF ++ RE D + Sbjct: 608 VYGESKARAEREVLALGGQALMIRTAAFFSPFDPYNFAAHVVGTLSAGREFVAAEDLVVS 667 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + A + +L+ + D LR + A+ G VSWA FA I +AE G Sbjct: 668 PTYVPDLVDASL----DLLLDGDAGLRHL----ANAGEVSWAGFARMI---AAELGLDAG 716 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSK 267 +V + + A RP + L + Sbjct: 717 RVLGVRADSFGWAAARPQHVPLSTER 742 >gi|292656186|ref|YP_003536083.1| RmlD substrate binding domain superfamily protein [Haloferax volcanii DS2] gi|291370755|gb|ADE02982.1| RmlD substrate binding domain superfamily [Haloferax volcanii DS2] Length = 300 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 16/240 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + D++IN AAYT VD E PE+A ++N G +A D I Sbjct: 45 VDITDTERVVELLDEYDVDLVINCAAYTDVDGCESNPEVATAVNGTAPGDLAAVCDDREI 104 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 P I+ STDYVFDG + +E P+ YG+SKL GE V + +ILR ++VY Sbjct: 105 PFIHYSTDYVFDGETDGFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLSFVYGA 164 Query: 154 FGS-----NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 G F + + + DQ TP+ A +A +++ D + Sbjct: 165 RGDTSDLVGFPQWVASTLAAGDTVPLFTDQTMTPSRAGNVATTTLELL-------DAGVS 217 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G FH+ A V+ +DF E I GG + + A RP SCLD S + Sbjct: 218 GTFHV-ASQSAVTPSDFGEKI---CEVIGGDATLIESSVMADLDRPAARPRRSCLDVSNV 273 >gi|257066021|ref|YP_003152277.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii DSM 20548] gi|256797901|gb|ACV28556.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii DSM 20548] Length = 287 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 122/230 (53%), Gaps = 11/230 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G++G++ ++ D EI+ + ++D+ K+ ++F P +I+N + Sbjct: 8 KIWITGSHGRLGSTIYRYLDPIDAEIVATDKNEVDITNQKEVSTFIERLRPTIIVNASGL 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + ++ E P+ A+ +NA GA IA AA+ + +ST VFDG + P E P Sbjct: 68 SKKNECEKNPDEAYLLNAIGAKNIAIAANRHQTKIVQLSTGDVFDGNTINPFKEIDTPRP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSK GEE V +++N Y I+R + +YS + F+ +++ AK+ + I + D+ Sbjct: 128 NTVYGKSKFLGEEFVRNFSNYYFIIRVSRLYSRENA-FVENIIDQAKKGKVI-MPKDRIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +PT A ++++ +I++ TS G +H + + G S +FA+ + Sbjct: 186 SPTPAFELSKFLIELIK-------TSNFGTYHASCE-GYCSHKEFAQEVM 227 >gi|86134015|ref|ZP_01052597.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152] gi|85820878|gb|EAQ42025.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152] Length = 299 Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 85/266 (31%), Positives = 124/266 (46%), Gaps = 21/266 (7%) Query: 28 RVGRPD-----IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 R GR D ID+ L PD IIN AA T VD E++ +N E G Sbjct: 39 RSGRNDFQYISIDITNKSQLTEELLKIKPDYIINTAAMTQVDACENDKAKCDILNVEVVG 98 Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +A + I+ISTD++FDG + E NPL+ YG SKL E+ + NY Sbjct: 99 WLAVICQELSAHLIHISTDFIFDG-KKGWYKEIDEPNPLSYYGLSKLKSEQVLEKSNINY 157 Query: 143 VILRTAWVY-SIFG---SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 ILRT VY +F SN +L + + +REI++V DQ+ TPT +A A +I+ Sbjct: 158 TILRTILVYGKVFDMSRSNIVLWVKESLENKREITIVDDQYRTPTYVEDLALA-CKISM- 215 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP 258 D + GIF++++ +S D A+ I +A S + I T A+RP Sbjct: 216 -----DKNATGIFNISS-SELLSIFDIAKQI---AAVFNLDDSYIKSISTATLNQTANRP 266 Query: 259 AYSCLDCSKLANTHNIRISTWKEGVR 284 + D SK N T+K+ ++ Sbjct: 267 IKTGFDLSKTNKELNFYPKTFKDDLQ 292 >gi|317484421|ref|ZP_07943336.1| RmlD substrate binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924340|gb|EFV45511.1| RmlD substrate binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 285 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 33/288 (11%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 + NG AQSL D E D +LL P + +PDVI N ++ + Sbjct: 23 LAGNGWEAQSL------DFE-------DCNLLNPVELQPRIEFINPDVIFNTVSWNTENP 69 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE +P+ A S+N + ++ S+D VF+G +P E +P++ G Sbjct: 70 AEKQPQEALSVNRGLPAFLGGLVKGTPRFLVHYSSDQVFNGRKDSPYTEEDKADPISPCG 129 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 KS+LAGE+ + +N I+RT W++ G +FL +L AK + V+ DQ G+PT Sbjct: 130 KSRLAGEQALLELNADNICIIRTGWLFGPDGDSFLKRLLGRAKTEGTVEVIHDQIGSPTY 189 Query: 185 ALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 A +A+A +Q+ LR G++H+ A+ G +W + A E+ + Sbjct: 190 AKDLAQATLQL---------VKLRAPGLYHV-ANSGQATWCELAA----EAVRQASLPCS 235 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + K R Y L +K + W + +R + ++ Sbjct: 236 VRAVASSD---KTLRANYEVLSSAKYTALTGCPMRPWSQALREYIYSV 280 >gi|227546956|ref|ZP_03977005.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212557|gb|EEI80445.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 476 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 26/280 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---IINPA 58 + +V G+NG++ +++ + + D D D A + + + D+ IIN A Sbjct: 191 RTMVFGSNGKLGRAIRRYA-ESHGLHGFEYHDTDTFDIAD-AKAYAAINWDLYGTIINAA 248 Query: 59 AYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDE 114 A+TAVD+AE + A+ N +G +A+ A I ++IS+DYVFDG T +E Sbjct: 249 AFTAVDEAETPGGRKNAWRTNVQGVKNLARIATEHRITLVHISSDYVFDGTKELHTEDEE 308 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F+ PL +YG++K AG+ V + +Y +LR++WV G NF+ ML LA+ Sbjct: 309 FA---PLGVYGQTKAAGDALVENVPQHY-LLRSSWVIGE-GRNFVTRMLGLAQNHAHAEA 363 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG T +A AI + + G ++MT G SW D A +F + Sbjct: 364 PSDQFGRLTFTDDMANAIFHLL------DGGASYGTYNMTGSGRIASWYDIARLVFQTA- 416 Query: 235 ERGGPYSKVYRIFTKQYPTKAH---RPAYSCLDCSKLANT 271 G + +Y + H RP LD SKL T Sbjct: 417 --GVDPDTITANSVAEYAREHHAAMRPQNCSLDLSKLEAT 454 >gi|227536063|ref|ZP_03966112.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] gi|227243960|gb|EEI93975.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] Length = 308 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 111/232 (47%), Gaps = 27/232 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFFLS 48 L+ G+NG + Q L+ + D E+I + + +D+L + + Sbjct: 7 LITGSNGFLGQKLTDLLSADSRYEVIATSKGENRNPNQADYTFRQLDILDTESLNNILQH 66 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + P II+ AA T+V+ E++PE+ +N + + + A +++STD+VFDG Sbjct: 67 YKPASIIHTAALTSVEACEEQPELCQRLNIDVVAQLGRYAALNNSYLVHLSTDFVFDG-K 125 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLR 164 P E PTNPL+ YG+SK+ E +A Y +LRT VY I SN +L Sbjct: 126 NGPYKEDDPTNPLSAYGRSKVDSENALALTQCKYAVLRTILVYGIIADEKRSNLVLWAKD 185 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 ++ I VV DQ+ PT +ARA + IE T GIFH++ + Sbjct: 186 KLSKQEAIKVVNDQWRMPTFVDDLARA----CKSAIEKQQT---GIFHISGE 230 >gi|268317519|ref|YP_003291238.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252] gi|262335053|gb|ACY48850.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252] Length = 308 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 108/235 (45%), Gaps = 28/235 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGR-PD------------IDLLKPKDFASF 45 + L+ G NG + Q L + E ++ R P+ +D+ + Sbjct: 4 QRILITGANGLLGQELVAQLSWHAEYDVLATARDPEPRFRGGSCGYVPLDITDARAVRRI 63 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F F+P V+IN AA T VD+ E E E + +N E +A+ G I +STD+VFD Sbjct: 64 FQDFTPTVVINCAAMTQVDRCEIEKEACWRVNVEAVETLARLCRQFGARLIQVSTDFVFD 123 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVY----SIFGSNFLL 160 G + P E NP+N YG+SKLA E V + + + I RT VY + SN L Sbjct: 124 GTA-GPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYGTGEQLSRSNIAL 182 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 ++ + R I VV DQ+ TPT +A I +I + GI+H++ Sbjct: 183 WVIEQLSQGRRIRVVTDQWRTPTYVADLAAGIERIVR-------YNKHGIYHISG 230 >gi|253702695|ref|YP_003023884.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251777545|gb|ACT20126.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 730 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 16/229 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G G + QS S +C Q + + R +ID+ A+ + P ++N A + Sbjct: 452 LIVGKTGTLGQSFSRLCRQRGIPCHLLSRSEIDIASAASVATALDRYLPWAVVNGAGFVR 511 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 +D AE + F N G +A G+ + S+D VF+G RT E P +PLN Sbjct: 512 IDDAEGDAGTCFRENTVGPALLAAECARRGVALMTFSSDMVFNGSKRTAYQERDPVSPLN 571 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVCDQ 178 IYG+SK E +V ++LRT+ + FG NF+ + LR + D Sbjct: 572 IYGRSKAEAERQVQQIYPGALVLRTS---AFFGPWDRYNFVTAALRRLAAGETVEAASDL 628 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +PT + A + +L+ + ++ GI+H++ + G VSWA+ A Sbjct: 629 VVSPTYIPDLVHAGL----DLLLDGES---GIWHLS-NAGAVSWAELAR 669 >gi|167622550|ref|YP_001672844.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167352572|gb|ABZ75185.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 311 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 15/226 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGR----PDI---DLLKPKDFASFFLSFSPD 52 K +V G +G + ++L Q+ + II G P+I DL + +SF PD Sbjct: 6 KIMVTGASGLLGRALIKQLGQNSQQQIIACGYSRFGPNIERLDLTQAAQVSSFVAKHKPD 65 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I++ AA D +E +P+ A ++N+E + +AA G +YISTDYVFDG S++P Sbjct: 66 IILHCAAERRPDVSEQDPQAALALNSEATQFLTQAASQHGAWLLYISTDYVFDG-SQSPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS---NFLLSMLRLAKER 169 E + TNP+N YG+SKL GE V+ + ILR +Y S + ++ +L + Sbjct: 125 REDAETNPVNFYGQSKLKGELVVSDAQQGFAILRLPILYGEVESLNESAVMVLLNHLVDT 184 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 E S+ +PTS +A AI ++ ++ + L G +H +A Sbjct: 185 AEQSIDNWAIRSPTSTADVAAAITKMI--ALKQAGEPLAGHYHFSA 228 >gi|284174227|ref|ZP_06388196.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2] gi|261603036|gb|ACX92639.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2] Length = 272 Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 136/273 (49%), Gaps = 25/273 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR------VGRPDIDLLKPKDFASFFLSFSPDVI 54 M+ L+IG +GQ+ LS++ + E+I+ + +D+ F + PDVI Sbjct: 1 MRILLIGASGQLGVELSNVLSKKHEVIKTYNSSEIQGYKLDITDFPHLEDFIIKKRPDVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA T VDK E E + A+ IN++ I +A + I+ISTDYVFDG ++ E Sbjct: 61 INTAAMTDVDKCEIEKDKAYKINSQAVKHIVRAGRVVDSYVIHISTDYVFDG-NKGNYKE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + NP+N YG SKL GE +SY + +I+RT+ V+ G F + + + KE + + + Sbjct: 120 DNIPNPINYYGLSKLLGEIFASSYDES-LIIRTSGVFRNKG--FPIYVYKTLKEGKTV-L 175 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + +P SA ++A AI ++ D GI H+ G +S + A I E Sbjct: 176 AFKGYYSPISARKLALAIDELL-------DLRKTGIIHVA--GERISRYELAIKI-KEKF 225 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 G +V I K + K RP S LD SK Sbjct: 226 NLPGEVKEVDEI--KSWIAK--RPYDSSLDISK 254 >gi|150390215|ref|YP_001320264.1| dTDP-4-dehydrorhamnose reductase [Alkaliphilus metalliredigens QYMF] gi|149950077|gb|ABR48605.1| dTDP-4-dehydrorhamnose reductase [Alkaliphilus metalliredigens QYMF] Length = 278 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 7/228 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK ++G G + L++ + + + ++D+ + P V+I A Sbjct: 1 MKVCIVGGKGTLGHELTAQLKVLSPFKTYLLEIENVDIESFERVNKTLKEIVPGVVIYAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 + V+ E + AF +NA GAG +A IG +YIS+D+VF G + +E P Sbjct: 61 EFNDVEACELRSDDAFIVNAHGAGMVASICAGIGAKMVYISSDFVFSGEKSSSYNEKDPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+NIYG SK GE +V + I+RTA ++ ++F+ ++L L V+ DQ Sbjct: 121 KPINIYGWSKYFGEHEVEKNLQKHFIIRTARIFGERQTSFINTVLNLPTSNSIFKVIGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 G+ T +A I + L+ + GI+H + G +W + A Sbjct: 181 RGSCTYTKDLALGI----NRLLSENSIKKYGIYHFV-NSGSCTWYEMA 223 >gi|150400814|ref|YP_001324580.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3] gi|150013517|gb|ABR55968.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3] Length = 305 Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 15/256 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + +PD ++N AA+T VD E E E A+ NA G + + I Sbjct: 49 VDITDENKIKKTIENINPDFVVNTAAFTNVDLCETEKEQAYKTNALSVGYVGAPCKKLNI 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYS 152 P +ISTDYVFDG + E NP+N YG +K GE+ + ++ I+R + Y Sbjct: 109 PLCHISTDYVFDGEDGNYV-ENDEINPINYYGYTKAEGEKILNELNHDLTSIVRISVPYC 167 Query: 153 I--FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 I NF + +L + K+ +++++ DQ+ TPT ++ I+ +I D S G+ Sbjct: 168 ISPVKVNFFMWVLDMLKKGEDMNILIDQWNTPTFINELVDGIV-----IIHKKDAS--GL 220 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 FH G VS +FA + P + V + + KA+RP + L+ K+ Sbjct: 221 FHFGG-GEKVSRYEFALKVAEIFEMDKTPINPVE---SSEMNWKANRPKDTTLNNGKIER 276 Query: 271 THNIRISTWKEGVRNI 286 I++ T E ++ I Sbjct: 277 KLKIKLKTVDECLKEI 292 >gi|328951577|ref|YP_004368912.1| dTDP-4-dehydrorhamnose reductase [Marinithermus hydrothermalis DSM 14884] gi|328451901|gb|AEB12802.1| dTDP-4-dehydrorhamnose reductase [Marinithermus hydrothermalis DSM 14884] Length = 241 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 84/148 (56%), Gaps = 5/148 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ G++ ++L + + E+I RP +DL +P+ + F + P+V+++ AAY Sbjct: 1 MRLLVTGSTGRMGRTLLPLLPTEWEVIAPRRPAVDLTRPETLDALFAAHQPEVVLHLAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V +AE E E+ + +N EG A+A+ A +++STDYVFDG R E NP Sbjct: 61 TDVARAEREREVCWRVNVEGTRALARRAPGW---FVHLSTDYVFDG-ERGMYREEDLPNP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTA 148 N Y SK GEE A +I+RT+ Sbjct: 117 KNFYALSKTVGEE-AARQAPRPLIVRTS 143 >gi|299133411|ref|ZP_07026606.1| dTDP-4-dehydrorhamnose reductase [Afipia sp. 1NLS2] gi|298593548|gb|EFI53748.1| dTDP-4-dehydrorhamnose reductase [Afipia sp. 1NLS2] Length = 286 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 21/292 (7%) Query: 2 KCLVIGNNGQIAQ-SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G G + Q +L++ + +II GRP DL + A F P ++++ AA Sbjct: 3 KVLITGATGMLGQYALAAAKAEGYDIITFGRPQNDLNNIETIAPFIAQIKPSIVLHLAAQ 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E +P +A IN +AKA +G Y+ST VF +T +E +P Sbjct: 63 TDVDLCERDPALAARINVLATREVAKATTMVGGWLGYVSTSNVFGAKEQTVYNELDLPDP 122 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERR----EISVV 175 +N YG+SK GE+ V Y +N++I+R W+ S + ++ + R +I V Sbjct: 123 VNYYGRSKFWGEQMVIQYAPHNHLIVRAGWMIGGGASKDHKFVGKIIAQIRNGASQILAV 182 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D+ G+ T+A +AR L+ ++ G+FH + G + I E A+ Sbjct: 183 DDKQGSITAAENLARF-------LLASAKRGRIGLFHFASKGTVTRFQ-----IACEIAK 230 Query: 236 RGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLAN-THNIRISTWKEGVRN 285 G YS V R + + +P A R ++ L++ +I I +W E ++ Sbjct: 231 SLG-YSGVVRGVRSNIFPLSAPRATSEGIESIFLSDAAEDIYIGSWNEDLQK 281 >gi|94986107|ref|YP_605471.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM 11300] gi|94556388|gb|ABF46302.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM 11300] Length = 723 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 20/270 (7%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + ++ + C Q + + R ++++ P+ A+ ++ P ++N A Y Sbjct: 440 LLITGATGTLGRAFARACEQRGLPYHLLSRRELEIADPRSAAAALATYRPWAVVNAAGYV 499 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE +P N G +A A G+ + S+D VFDG P E PL Sbjct: 500 RVDDAERDPRNERE-NTLGPQVLAHACAEQGVRLLTFSSDLVFDGRKGKPYVESDTPKPL 558 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVCD 177 N YG+SK A EE V + +I+RT+ + FG NF + R + + + V D Sbjct: 559 NAYGRSKRAAEESVLTALPEALIVRTS---AFFGPWDPYNFATWVWRELRAGQPVRVADD 615 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q +PT + A + +L+ +S++ G++H+ A+ G VSWA FA+ + + G Sbjct: 616 QVVSPTYVPDLTHAAL----DLLIDSES---GLWHL-ANAGAVSWAAFAQLV---AGVTG 664 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 + V + + A RP YS L + Sbjct: 665 LDAALVEPVPSAALNLSAARPPYSALTSER 694 >gi|189465900|ref|ZP_03014685.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM 17393] gi|189434164|gb|EDV03149.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM 17393] Length = 301 Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 87/302 (28%), Positives = 137/302 (45%), Gaps = 30/302 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K LVIG NG + + + ++ E I G DI D+ + + ++ F Sbjct: 6 KILVIGANGFTGRRILNDLSRNDEYIVTGCSLHDDIAPGSGNYRFISADICQMGEQSALF 65 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P+V+IN +A + D E E A SIN G +A ++ I++STD+VF+G Sbjct: 66 REVRPNVVINTSALSVPDYCEAHHEEADSINVNAVGQLAFRCEASAARLIHLSTDFVFNG 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + E +P+N YG +KL GE++ A +NY I R A VY ++L+L Sbjct: 126 DTTQLYTEVDTPDPVNYYGVTKLKGEKRAAELCSNYAIARVAVVYGAALPGQHGNVLQLV 185 Query: 167 KER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 +R EI VV DQ+ T T +++ I ++ N N GIFH+ ++ Sbjct: 186 ADRLRNNEEIRVVSDQWRTATYVGDVSQGIEKLI-NYPNN------GIFHICG-SECLTI 237 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A ++ + YS + + TKQ RP +S L K + T +EG Sbjct: 238 ADIAYHV---ADILNLDYSLILPVTTKQMEEATPRPRFSGLSIEKARRELGYQPHTLEEG 294 Query: 283 VR 284 +R Sbjct: 295 IR 296 >gi|167957286|ref|ZP_02544360.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [candidate division TM7 single-cell isolate TM7c] Length = 285 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 134/276 (48%), Gaps = 22/276 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +++G GQ+ ++L C + + R ++D+ + +F S DVIIN AA Sbjct: 4 KYVILGAGGQLGKAL---CAMFPDAKALSREELDIADEEQVNAFDWS-KYDVIINAAALV 59 Query: 62 AVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 D +E + A + +NA G +AK A I+ S+DYV+DG + D+ Sbjct: 60 NADGSETDELRAKTWLVNAYGPRNLAKIAIEQNKTLIHYSSDYVWDGREKNHQDD-EVVA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK AG+ V S + I+R +WV G N +M LA R VV DQF Sbjct: 119 PLLVYGESKAAGD-LVVSLAPKHYIMRVSWVVGD-GHNMPKTMKNLADMRINPKVVNDQF 176 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T A +IARA N + G++++T +G SW + A +F E A G Sbjct: 177 GRLTFASEIARATKYFLDNNVA------YGLYNVTNEGPVKSWYEIAADVF-EYA--GYD 227 Query: 240 YSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANT 271 ++V I T +Y P A RP S +D SKL T Sbjct: 228 RNRVQPISTDEYSADKPGFAPRPLNSDMDLSKLRQT 263 >gi|297184077|gb|ADI20196.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 298 Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 118/238 (49%), Gaps = 17/238 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ +D ++ F PDVII+ AA T VD+ E +P+ A +N EG IA AA+ +G Sbjct: 49 MDITNAEDVSNVVGDFEPDVIIHGAAMTHVDECELQPDQATLLNVEGTRNIANAANEVGA 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 ++ISTD++FDG P E + PL+ YG +KL E+ + ++ ILRT V + Sbjct: 109 HVVHISTDFIFDG-KDGPYKEDAKAQPLSHYGWTKLEAEDIIKDLP-SWSILRTVLVIGM 166 Query: 154 FG----SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 SN +L ++ + I+VV DQF TPT A +A+ + A D +G Sbjct: 167 AEDLSRSNIVLWAKGALEKGQPINVVDDQFRTPTLAEDLAQGALLAA-------DQCAQG 219 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 +F+++ GP + + + +A G V R + A RP + D SK Sbjct: 220 VFNIS---GP-DFMSIYDLVGQVAAYFGLSMESVTRTDSTTLNQPAKRPPRTGFDISK 273 >gi|157960380|ref|YP_001500414.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] gi|157845380|gb|ABV85879.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] Length = 307 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 21/230 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG--RPDI-----DLLKPKDFASFFLSFSPD 52 K +V G G + +++ Q D ++I G R I DL + + F PD Sbjct: 6 KIMVTGATGLLGRAVVKQLKQCSDFQVIECGFSRASIGIEVLDLTQSEQVFEFVAKHKPD 65 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 I++ AA D +E P+ A ++NAE + ++AKAA G +YISTDYVFDG + Sbjct: 66 AIVHCAAERRPDVSEQAPQAALALNAEASDSLAKAASQNGAWLLYISTDYVFDG-TAPKY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAKE 168 +E S TNP+N YG+SKL GE VA ++ ILR +Y S+ S ++ + L Sbjct: 125 EESSQTNPVNFYGQSKLQGENLVADSEPSFAILRLPILYGDVESLNESAVMVLLKHLLAP 184 Query: 169 RREISVVCDQFG--TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 E D + +PTS IA AI ++ +++ + L G +H +A+ Sbjct: 185 HVEY---LDDWAVRSPTSTADIAVAIHEML--VLQLAGKQLSGRYHFSAE 229 >gi|227497969|ref|ZP_03928149.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM 15434] gi|226832627|gb|EEH65010.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM 15434] Length = 490 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 20/224 (8%) Query: 52 DVIINPAAYTAV---DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 DVI+N AA+TAV + AE P A+ NA G +A+ A + ++IS++Y FDG Sbjct: 258 DVIVNAAAWTAVDAAETAEGRP-AAWRANATGPANLARVASEHALTLVHISSEYTFDGAQ 316 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 + ++ SP+ PL +YG+SK G+ VA+ +Y++ RT+WV G NF+ +M LA+ Sbjct: 317 KIHTEDESPS-PLGVYGQSKAGGDAAVAATPRHYLV-RTSWVVGD-GKNFVKTMAGLAER 373 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + SVV DQ G T +A II + E G ++++ +G VSW + A Sbjct: 374 GVKPSVVGDQTGRLTFTTDLAAGIIHLLTTQAE------YGTYNLSGEGPVVSWFEVARR 427 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKL 268 ++ G S+V + T++Y A RPA+S LD SK+ Sbjct: 428 VY---ELLGHDPSEVTSVSTQEYYAGKEGIAPRPAHSALDLSKI 468 >gi|255036982|ref|YP_003087603.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] gi|254949738|gb|ACT94438.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] Length = 300 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/304 (28%), Positives = 129/304 (42%), Gaps = 37/304 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFF 46 K L+ G+NG + Q L ++ V +E I R + +D+ P+ Sbjct: 5 KILITGSNGLLGQKLVALLVSKAHIETIATARGENRLPFQTGYRYVEMDITDPESVDRVL 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P V+I+ AA T VD+ E E + + +N + A I ++STD+VFDG Sbjct: 65 DVERPHVLIHTAAMTNVDQCEIEKDACWKLNVTATETLVAACAKYKIFLEHVSTDFVFDG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSM 162 S P E NP++ YG SK A E+ V S + I RT VY I SN +L + Sbjct: 125 TS-GPYREQDVPNPVSFYGWSKYAAEKAVMSSDIEWAIARTVLVYGIAHDMSRSNIILWV 183 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +E + I VV DQF TPT A +A IA D +GI+H +S Sbjct: 184 KKSLEEGKAIKVVTDQFRTPTLAEDLALGCFLIA-------DQEAKGIYH-------ISG 229 Query: 223 ADFA---EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 DF E + G S + + A RP + +K +N ++ Sbjct: 230 KDFLTPYEMALATAEYFGLDASLISPTDASAFTQPARRPPRTGFKLTKASNVLGYEPHSF 289 Query: 280 KEGV 283 +EG+ Sbjct: 290 REGI 293 >gi|146304023|ref|YP_001191339.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] gi|145702273|gb|ABP95415.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] Length = 293 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 119/237 (50%), Gaps = 23/237 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKPKDFASFFL----SFSPDV 53 M+ +V G G + + + +D E++ V +P+ D +S L SPDV Sbjct: 1 MRVVVTGAGGLLGKRIVQ-AFKDYEVVGVYHRSQPETSPFLVLDLSSLNLRPIEELSPDV 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 II+ AA T VDK E EP++A +N + I K + +YISTDYVFDG +R Sbjct: 60 IIHAAALTDVDKCEREPDLARLLNVDVTREIVKVSKRTNAFLVYISTDYVFDG-TRGNYR 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAKER 169 E TNP+N+YG +KL GE+ V + +++RT+ Y + NF L +L+ K Sbjct: 119 EEDETNPVNVYGLTKLEGEKLVRDV--DSLVVRTSTPYGSNPASGKDNFALWLLKKLKAG 176 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 ++ + DQ +PT L +++ L E D ++G+ H+ A VS +F+ Sbjct: 177 ERVNALVDQVTSPT--LNTNFSLM-----LREAVDRRIKGVLHL-AGRSQVSRYEFS 225 >gi|288963164|ref|YP_003453443.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] gi|288915416|dbj|BAI76899.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] Length = 290 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 11/230 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G +G + + ++ +II +GR +DL + + +P +IIN AA T V Sbjct: 9 LLVGASGILGSAFDAIIPAASKII-LGRDMLDLHHLDSVIAKVVGVNPSLIINCAADTDV 67 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 + AED PE AF++N AGA+AK A G ++ S+ + P E P + Sbjct: 68 EGAEDAPERAFAVNVGLAGALAKGASESGAAMLHFSSTGCYGDWKEEPYVEDDMLRPTTV 127 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLRLAKERREISVVCDQFG 180 + +K GEE V +N +ILR W++ NF+ S L + + EI Q G Sbjct: 128 HHHTKAVGEEAVLEAHSNALILRLGWIFGGLPEQKKNFVWSRLVETESKSEIGANPRQIG 187 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 PTSA +A ++ +LIE ++ GIF+ G VS D+ I Sbjct: 188 NPTSANDVA----ALSLSLIEK---NIEGIFNCVGPGRRVSRLDYVSEIL 230 >gi|119962499|ref|YP_947906.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] gi|119949358|gb|ABM08269.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] Length = 469 Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 144/276 (52%), Gaps = 21/276 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDF-ASFFLSFSPDVIINPAAY 60 + LV+G GQ+ +L D + GR D+ + A + S+S +IN AA+ Sbjct: 189 RTLVLGAEGQLGTALRHAFEGDATVEFAGRAQFDITSEASYRAVNWRSYS--AVINAAAF 246 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 TAVD AE PE A++INA +A+AA + +++S+DYVFDG + ++ P Sbjct: 247 TAVDAAE-TPEGRAAAWNINATAVSRLARAAVEHSLTLVHVSSDYVFDGTAEVHFEDEMP 305 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T PL +YG+SK AG+ VA+ +Y++ RT+WV G NF+ +M LA + SVV D Sbjct: 306 T-PLGVYGQSKAAGDAAVAAVQKHYIV-RTSWVVGE-GRNFVRTMASLAAKGASPSVVDD 362 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G + A IA I +L+++ + G ++++ G SWA A ++ S G Sbjct: 363 QWGRLSFAKDIAAGI----RHLLDHQ--APYGTYNLSNGGERQSWAGVARDVYRLS---G 413 Query: 238 GPYSKVYRIFTKQY--PTKAHRPAYSCLDCSKLANT 271 +V I T Y P A RP S LD SK+ T Sbjct: 414 ADPERVTPISTADYMGPGTAPRPRSSVLDLSKIRAT 449 >gi|149278594|ref|ZP_01884730.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149230589|gb|EDM35972.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 304 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 24/235 (10%) Query: 4 LVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD-------------IDLLKPKDFASFFLS 48 LV G+NG + Q ++ + Q ++I + + +D+L P + + Sbjct: 5 LVTGSNGLLGQKITERLLETQQFKLIASAKGENRYPVKEGYTYVEMDILDPANVKEVIET 64 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD II+ AA T VD ED+ E+A +N + + I +++STD++FDG + Sbjct: 65 HKPDAIIHTAAMTNVDTCEDQKELAHELNVTAVETLLANCEPHNIQLVHLSTDFIFDG-A 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLR 164 P DE + NPL+ YG +KL EE + + + ILRT VY I SN +L Sbjct: 124 DGPYDELAAPNPLSYYGITKLEAEEVIKNSKCRWAILRTIIVYGIVSDMSRSNIVLWAKG 183 Query: 165 LAKERREISVVCDQFGTPTSALQIAR----AIIQIAHNLIENSDTSLRGIFHMTA 215 ++ I+VV DQ+ PT A +A A+ AH + S + I + Sbjct: 184 ALEKGNPINVVNDQWRMPTLADDLADCCLLAVQHDAHGVFNASGKDMMSISELVG 238 >gi|257228947|gb|ACV52995.1| putative CDP-L-6-deoxy-altrose synthase [Yersinia pseudotuberculosis] Length = 288 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVIINPA 58 M + G+NG I +L+ ++ + I+R+ RPD L + + ++ V+++ A Sbjct: 1 MTIAITGSNGVIGSTLADFFLKCNYNILRLQRPDYKLGTQLSELVKLLDKYNVSVLVHCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPIDEFSP 117 A T V+ E P+IA+S N +++A + I +Y+S+ ++ DG SR P +EF Sbjct: 61 ANTNVEYCELHPDIAYSDNYILTEFLSRACEVNKIKFVYLSSTGIYGDGKSR-PYNEFDS 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKERR-EIS 173 +P + +SK GE+ V++ ++Y+I+RT WV+ + NF+ + +R AK+ E+ Sbjct: 120 VSPTTHHHRSKFLGEQSVSNMVSDYLIIRTGWVFGGDWLLSKNFVANRIREAKQSNGEVK 179 Query: 174 VVCDQFGTPTSALQIARAIIQI 195 QFG PT A + I ++ Sbjct: 180 SDASQFGNPTYAYDLCHHIFKL 201 >gi|313117361|ref|YP_004044344.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM 11551] gi|312294252|gb|ADQ68683.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM 11551] Length = 301 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 122/293 (41%), Gaps = 39/293 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-----RP-------DIDLLKPKDFASFFLS 48 M+ L++G NG + ++ + QD G RP ID+ Sbjct: 1 MQLLILGANGLLGSNVVT-AAQDRGWRTTGTYHSERPTFDIPLHQIDITNTDAVQRVLSE 59 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD ++N AA T VD E+ E A +NA G IA I +++STDYVFDG Sbjct: 60 VEPDWVVNCAAMTDVDGCEENTEHAHEVNARAPGEIASQCVESSIRFLHVSTDYVFDGTV 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAK 167 +E P+ YGKSK AGE +V + +I R ++VY + GS+ L + Sbjct: 120 NGVYEEDDAPQPIQEYGKSKFAGENEVVERDPDALITRLSFVYGMHRGSDQLTGFPAWVR 179 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 R + + DQ TPT A Q A I + D G+FH+ A + Sbjct: 180 GRLLDGEQTPLFTDQHVTPTRAGQAAETICDLI-------DADESGLFHVAAQSCTTPY- 231 Query: 224 DFAEYI-----FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 +F I E+ G S V R A RP+ +CL+ SK+ T Sbjct: 232 EFGAAIAGQLGMDETLLTQGSQSDVNR--------PAERPSRTCLNVSKVEET 276 >gi|220907960|ref|YP_002483271.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219864571|gb|ACL44910.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 292 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 21/225 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-----------VEIIRVGRPDIDLLKPKDFASFFLSFS 50 K LV G +G + +L M D ++I V IDL + F L Sbjct: 4 KLLVTGASGFLGWNLCQMAQADWQVYGTGFAKNIQIPGVHFRHIDLRNFVELKQFLLDIQ 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + + P+ ++ IN +G +A + IP ++ STD VFDG + Sbjct: 64 PDGVIHTAAQSNPNYCQLNPQESYEINVRTSGDLASLCAEMDIPLVFTSTDLVFDG-QHS 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKE 168 P E P PL++YG+ K+A E + + V+ R ++ + S +F+ +++ + Sbjct: 123 PYRETDPVCPLSVYGEHKVAAERLIQNAHPGAVLARMPLMFGVAASAQSFIQPFVKILRS 182 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 +E+ + D+F TP SA AR ++ I +GI H+ Sbjct: 183 GQELKLFVDEFRTPVSAETAARGLLLILQK-------QFKGILHL 220 >gi|224539746|ref|ZP_03680285.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus DSM 14838] gi|224518646|gb|EEF87751.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus DSM 14838] Length = 289 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 15/254 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + ++ F P+++IN +A + D E E A SIN G +A ++ Sbjct: 42 DICQMGEQSALFREVRPNIVINTSALSVPDYCEAHREEADSINVNAVGQLAFRCEASAAR 101 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VF+G + E +P+N YG +KL GE++VA +NY I R VY Sbjct: 102 FIHLSTDFVFNGDTGQLYTEEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGAA 161 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R EI VV DQ+ TPT +++ I LI + + GI Sbjct: 162 LPGQHGNILQLVANRLRNNEEIRVVSDQWRTPTYVGDVSQGI----EKLINHPNN---GI 214 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +H+ ++ AD A + + YS + + TKQ RP +S L K Sbjct: 215 YHICG-SECLTIADIA---YRVADTLNLDYSLILPVTTKQMGETTPRPRFSGLSIEKARR 270 Query: 271 THNIRISTWKEGVR 284 + T +EG++ Sbjct: 271 ELGYQPHTLEEGIK 284 >gi|300772034|ref|ZP_07081904.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] gi|300760337|gb|EFK57163.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] Length = 308 Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 37/305 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFFLS 48 L+ G NG + Q L+ + D ++I + + +D+L + + Sbjct: 7 LITGANGFLGQKLTDLLSADSRYKVIATSKGENRNPNKADYTFRQLDILDTEALDNILQH 66 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + P II+ AA T+V+ E++PE+ +N + + + A +++STD+VFDG Sbjct: 67 YKPASIIHTAALTSVEACEEQPELCQRLNIDVVAQLGRYAALNNSYIVHLSTDFVFDG-K 125 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLR 164 P E PTNPL+ YG+SK+ E +A Y +LRT VY I SN +L Sbjct: 126 NGPYKEDDPTNPLSAYGRSKVNSESALALTQCKYAVLRTILVYGIIADEKRSNLVLWAKD 185 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWA 223 ++ I VV DQ+ PT +ARA + IE T GIFH++ + ++ A Sbjct: 186 KLSKQEAIKVVNDQWRMPTFVDDLARA----CKSAIEKQPT---GIFHISGEEMMSIAEA 238 Query: 224 DFAEYIFWESAERGGPYSKVY--RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + FW + + Y I +RP + D SK + R + ++E Sbjct: 239 VYTIADFWN-------FDRTYISEISAATIGQTDNRPRKTGFDLSKAKRLLDYRPTPFRE 291 Query: 282 GVRNI 286 + I Sbjct: 292 SLHLI 296 >gi|257228929|gb|ACV52978.1| putative CDP-L-6-deoxy-altrose synthase [Yersinia pseudotuberculosis] Length = 288 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 8/202 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVIINPA 58 M + G+NG I +L+ ++ + I+R+ RPD L + + ++ V+++ A Sbjct: 1 MTIAITGSNGVIGSTLADFFLKCNYNILRLQRPDYKLGTQLSELVRLLDKYNVSVLVHCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPIDEFSP 117 A T V+ E P+IA+S N +++A + I +Y+S+ ++ DG SR P EF Sbjct: 61 ANTNVEYCELHPDIAYSDNYILTEFLSRACEVNKIKFVYLSSTGIYGDGKSR-PYKEFDS 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKERR-EIS 173 +P + +SK GE+ V++ ++Y+I+RT WV+ + NF+ + +R AK+ E+ Sbjct: 120 VSPTTHHHRSKFLGEQSVSNMVSDYLIIRTGWVFGGDWLLSKNFVANRIREAKQSNGEVK 179 Query: 174 VVCDQFGTPTSALQIARAIIQI 195 QFG PT A + I ++ Sbjct: 180 SDTSQFGNPTYAYDLCHHIFKL 201 >gi|227829531|ref|YP_002831310.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|227455978|gb|ACP34665.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] Length = 195 Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 9/181 (4%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 G +DL F + PDVIIN A+ T VDK E E +AF +NAE I +A+ Sbjct: 3 GGYKLDLTNYSAVEDFIIKKRPDVIINTASLTDVDKCEVERSLAFKVNAETVKHIVRASR 62 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 + I+ISTDYVFDG +E P NP+N YG +KL GE SY ++ VI RT+ Sbjct: 63 VVEAYLIHISTDYVFDGKKGLYKEEDLP-NPINYYGLTKLLGETYALSYDDSLVI-RTSG 120 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 V+ G F + + + KE +E+S + +P SA ++A AI + LIE T + Sbjct: 121 VFRHKG--FPIYVYKTLKEGKEVSAFKGYY-SPISARKLAEAISE----LIEYRKTGILN 173 Query: 210 I 210 I Sbjct: 174 I 174 >gi|327404132|ref|YP_004344970.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823] gi|327319640|gb|AEA44132.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823] Length = 301 Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 30/240 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRP-------------DIDLLKPKDFASFF 46 MK L+ G+NG + Q + C++ + I + ++DL+ ++ + Sbjct: 1 MKILITGSNGLLGQKIVKRCLKHHISFIATSKGVNRNPECPSENYIELDLVNSEEVEALI 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P II+ AA T VD E PE + +N + + +AA + +STD+VFDG Sbjct: 61 KAQKPTAIIHTAALTNVDYCELHPEECYFVNVRASNVLFEAAKKVKAHFQLLSTDFVFDG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSI-FG---SNFLLS 161 P E NPL+IY +SK+ EE + + ++ N+ I RT VY FG SN +L Sbjct: 121 -ENGPYKEDDTVNPLSIYAQSKVDAEELLLNDSDTNWSIARTIIVYGTGFGLSRSNMILW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L + + +V DQF PT A +A ++I I+ ++ RGIFH++ GPV+ Sbjct: 180 ALEALPKGEVMKLVDDQFRAPTWADDLAYGCVEI----IKRNE---RGIFHLS---GPVT 229 >gi|170290460|ref|YP_001737276.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174540|gb|ACB07593.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 302 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 29/303 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD----------IDLLKPKDFASFFL 47 M LV G G + L + +D +I + RP +DLL + Sbjct: 1 MLILVTGGTGLLGWHLVNKLARDYRVIATHHINRPPSEDQRVEWVYLDLLDYEGIKRIIG 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+++I+ AAYT VD E + + AF +N ++A+A + IYISTDYVFDG Sbjct: 61 DLRPEIVIHTAAYTDVDGCEIDRKRAFDVNYLATKSLARACRGVCEYFIYISTDYVFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLR 164 R E P+N YG +KL GE + +++RT+ +Y F LS+L Sbjct: 120 ERGHYSEEDLPYPINYYGLTKLLGEVATTDLLDKSLVIRTSGIYGCSPGGKRGFALSLLE 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 E+ DQ+ +PT A +A I+++ + + G H+ D A Sbjct: 180 KLSRGDEVMAFTDQYLSPTYAPHLASNILKLL-------ELRVNGFLHIAGD-----RAS 227 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E+ + E G V +A RP S LD K + + ++ ++ Sbjct: 228 RYEFAIAVARELGADERLVKPSSMDTSSLRARRPRDSSLDTKKAKEELGLPFKSMRDCIK 287 Query: 285 NIL 287 + Sbjct: 288 EFI 290 >gi|114045934|ref|YP_736484.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] gi|113887376|gb|ABI41427.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] Length = 306 Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 73/243 (30%), Positives = 111/243 (45%), Gaps = 20/243 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + +F P+VI++ AA D +E PE A ++N + +A+ A + Sbjct: 43 LDLTQAAEVEAFIAREQPEVIVHCAAERRPDVSERSPEHALALNLSASQTLAEVAKTHQA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG + P E + NP+N YG SKL GE V S N + +LR +Y Sbjct: 103 WLLYISTDYVFDG-TTPPYAEDAEPNPVNFYGASKLQGETCVLSTDNGFAVLRLPILYGE 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + +L ++ + R V PTS IA AI ++ + +D S GI Sbjct: 162 VTQLNESAVLVLINQLLDGRPQRVDHWAIRAPTSTADIANAIAKLIQRQLHAADVS--GI 219 Query: 211 FHMTADGGPVSWA---DFAEYIFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCS 266 +H +A + E + +SA + Q PT A RP L C Sbjct: 220 YHFSATQTMTKYQMLLSLGELLGIDSAH----------LLPDQTPTDSAKRPQDCTLSCG 269 Query: 267 KLA 269 +LA Sbjct: 270 RLA 272 >gi|220907432|ref|YP_002482743.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219864043|gb|ACL44382.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 738 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 29/274 (10%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G G + ++ + +C ++ + +GR ++D+ P P +IN A Y Sbjct: 461 LITGATGTLGRAFARICQLRGIPYRLLGRREMDITNPVSVNQVLEELQPWAVINTAGYVR 520 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E + IN +GA +A+A + S+D VFDG P E PLN Sbjct: 521 VDDAEREAHLCRQINTDGAAILAQACVDRNTAYVTFSSDLVFDGQQADPYVESCAVAPLN 580 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVCDQ 178 +YG SK E+ V +++RT+ + FG NF+ + R + D Sbjct: 581 VYGDSKAIAEQWVLQTHPCALVIRTS---AFFGPWDEYNFVTLLRRHLAAGQPFRAADDA 637 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT ++ IA +L+ + + G++H+ A+ G VSWA+ A + AE+ Sbjct: 638 IVSPT----YVPDLVHIALDLLIDGEA---GLWHL-ANPGAVSWAELALCV----AEQ-- 683 Query: 239 PYSKVYRIFTKQYPTK-----AHRPAYSCLDCSK 267 +++ + PT+ A RPAYS L + Sbjct: 684 --ARLDATLIQPLPTRALGLLAQRPAYSVLGSER 715 >gi|284039662|ref|YP_003389592.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74] gi|283818955|gb|ADB40793.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74] Length = 299 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/233 (29%), Positives = 109/233 (46%), Gaps = 27/233 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-------------IDLLKPKDFASFF 46 K L+ G NG + Q L + + +VE+I R + +D+ + Sbjct: 3 KILLTGANGLLGQKLVGLLTKQPNVELIATARGENRLPFSDGYTYRAMDITDRQQVLDVI 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+I+ AA T VDK E + + ++ N I +A + +++STD++FDG Sbjct: 63 GDVRPDVVIHGAAMTDVDKCEVQKDACWAQNVHAVEYIIEACRAANAFLVHVSTDFIFDG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSM 162 + P DE + NP++ YG SK AGE V + I RT VY I SN +L + Sbjct: 123 AA-GPYDEDAEANPISFYGWSKQAGESAVRHSDIRWAIARTVLVYGIAHDMSRSNIILWV 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + ++ + I VV DQ+ +PT A +A IA D GIF+++ Sbjct: 182 KKSLEDGKNIKVVTDQWRSPTLAEDLAMGCFLIA-------DQEAEGIFNISG 227 >gi|218664471|ref|NP_001136304.1| methionine adenosyltransferase 2 subunit beta [Sus scrofa] gi|198448579|gb|ACH88506.1| methionine adenosyltransferase 2beta [Sus scrofa] Length = 334 Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/252 (30%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIYDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYISTDYVFDG P E +PLN YGK+KL GE+ V + Sbjct: 121 AKEAAAIGAFLIYISTDYVFDG-KNPPYREEDMPSPLNPYGKTKLEGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ P S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNPPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|257053212|ref|YP_003131045.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940] gi|256691975|gb|ACV12312.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940] Length = 297 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 14/169 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +IN AA T VD E +A INAE G IA A IP +++STDYVFDG + T Sbjct: 62 PDAVINCAAMTDVDACETASGVAHEINAEAPGQIASACAERAIPLVHVSTDYVFDGDTDT 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML------R 164 P E + NP+ +YG+SK GE +V +I+R +++Y + ++ L+ R Sbjct: 122 PYTESATPNPIQVYGESKRDGEVRVRESEAETIIVRPSFIYGVHRASGELTGFPAWVRDR 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 LA + DQ+ TP+ A A I+ + +T G H+ Sbjct: 182 LAA-GESTPLFTDQWVTPSRAGATASTILALL-------ETEFHGTVHV 222 >gi|134046340|ref|YP_001097825.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5] gi|132663965|gb|ABO35611.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5] Length = 276 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 11/183 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + +PD +IN AA T VD E E E+A+ NA G I KA S G Sbjct: 48 VDVTNEQKVQKVIQDINPDFVINTAAMTNVDFCEKEKELAYKANAISVGYIGKACKSTGS 107 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV--ASYTNNYVI-LRTAWV 150 +ISTDYVFDG + E NP+N YG +K GE + Y N ++ + T + Sbjct: 108 TLCHISTDYVFDGEDGNYV-ETDVINPINYYGFTKAEGERILNEMDYENKSIVRISTPYG 166 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 +S NF +L K + I+V+ DQ+ T T+ ++ +I+I N L GI Sbjct: 167 FSPVKLNFFTWVLENLKYEKPINVITDQYNTSTNLNNLSEIMIKIQQN-------DLSGI 219 Query: 211 FHM 213 H Sbjct: 220 LHF 222 >gi|148222444|ref|NP_001089523.1| methionine adenosyltransferase 2 subunit beta [Xenopus laevis] gi|82249356|sp|Q4QQZ4|MAT2B_XENLA RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|67678004|gb|AAH97788.1| MGC115498 protein [Xenopus laevis] Length = 334 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 16/260 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL + F P VII+ AA D E +PE+A +N + +AK A +G Sbjct: 70 LNLLDEAAVKALIQDFKPHVIIHCAAERRPDIVESQPELASLLNVVASENLAKVAAGVGA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IY+S+DYVFDG S P E S +PLN+YGK+KL GE V +LR +Y Sbjct: 130 FLIYVSSDYVFDGTS-PPYREDSIPHPLNLYGKTKLDGERAVLQNNEGAAVLRVPVMYGD 188 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S L ++ + + + +F PT +A +Q+ I+ D S+ Sbjct: 189 VEKLSESAVTILFDKVQFSNKSANLDHCQQRF--PTHVKDVATVCLQLTERKIQ--DPSI 244 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 +GI+H + + + I A+ S R T + RP LDCSK Sbjct: 245 KGIYHWSGNEQMTKYE-----IACAMADAFNLPSSHLRPITDEPVGATPRPWNPQLDCSK 299 Query: 268 LANTHNIRISTWKEGVRNIL 287 L + + ++ G+R L Sbjct: 300 LEKMGIGQRTPFRVGIRETL 319 >gi|311745813|ref|ZP_07719598.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1] gi|126576015|gb|EAZ80293.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1] Length = 311 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 19/215 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD------------IDLLKPKDFASFFL 47 K + G NG + Q L + ++ + E+I G+ + +D+ Sbjct: 12 KLFITGVNGLLGQKLVAQLLEKDEFEVIGCGKGESRLPFGGFKYVSLDITDEAKVQEVLS 71 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD++I+ AA T VD+ E E A+ N + +A++ + I++STD++F G Sbjct: 72 EIKPDILIHGAAMTNVDECELNQEAAYDANVNATSYLLQASEKLNTHFIFVSTDFIFSG- 130 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSML 163 P+DE + P+N YG++KL E+ V + T + I RT V+ I SN +L + Sbjct: 131 EEGPLDEEAIAKPVNYYGETKLKAEQLVMNSTFKWAIARTVLVFGIAHDMSRSNIILWVK 190 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 + + I VV DQ+ TPT A +A I IA Sbjct: 191 SSLESGKNIQVVDDQYRTPTLAEDLAAGCILIAEQ 225 >gi|291540642|emb|CBL13753.1| RmlD substrate binding domain [Roseburia intestinalis XB6B4] Length = 132 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 16/138 (11%) Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +MLRLA+ E+SVVCDQ G+PTSA+++ARAI T G FH T + Sbjct: 6 NFVKTMLRLAESHDEVSVVCDQQGSPTSAVELARAIHHF-------EPTENYGTFHATCE 58 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTH 272 G +WA FAE IF +R G +KV + ++QY P A+RPAYS L+ + T Sbjct: 59 GD-TNWAAFAEAIF----KRAGKTTKVNHVTSEQYAKMNPASANRPAYSILENYMMKLTD 113 Query: 273 NIRISTWKEGVRNILVNI 290 +++ W++ + + + Sbjct: 114 GYKMAEWQDALDEYMKTL 131 >gi|319950774|ref|ZP_08024663.1| dTDP-4-dehydrorhamnose reductase RmlD [Dietzia cinnamea P4] gi|319435565|gb|EFV90796.1| dTDP-4-dehydrorhamnose reductase RmlD [Dietzia cinnamea P4] Length = 222 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 35/199 (17%) Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--------IFGSNFLLSMLRLAKER 169 T+P +YG++KLAGE V + ILRT+W+Y+ I G +F+ +M RL +ER Sbjct: 5 TDPATVYGRTKLAGEHAVLAAHPEATILRTSWLYTGPERERWAIPGGDFVATMARLERER 64 Query: 170 REISVVCDQFGTPTSALQIARAIIQI------------------------AHNLIENSDT 205 E+SVV DQ+G+PT A +A AI+++ A +++ Sbjct: 65 DEVSVVDDQWGSPTHAPTLAAAILEMLAREAATHHAAGEAAAHAGTGTDAAAPAVDSPGV 124 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 RG+ A G +W + A F A G ++V T +P A RPA+S L Sbjct: 125 DTRGLVLHAAGSGRATWYEVARRTF---AYLGADPARVRPCTTADFPRPAPRPAFSVLSG 181 Query: 266 SKLANTHNIRISTWKEGVR 284 A + W + +R Sbjct: 182 RAWAAAGLTPLPDWDDSLR 200 >gi|159041989|ref|YP_001541241.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167] gi|157920824|gb|ABW02251.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167] Length = 288 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 21/239 (8%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 KD + + P+V+I+ AA VD+ ED+P++ + +N E + + + A +G Y+S Sbjct: 49 KDASRLINEYKPNVVIHTAAVGNVDQCEDQPDLCYRVNVETSRILLREAYRVGSAIYYLS 108 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--N 157 TDYVFDG R +E P+N YG SKL EE + + I+R AWVY N Sbjct: 109 TDYVFDG-ERGLYNEDDAPRPINYYGLSKLLAEEITRALGGS--IIRVAWVYGTGPGRVN 165 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 F +++ ++ + DQ+ +PT I A++++ ++ G+ H+T G Sbjct: 166 FGRTVVEKLSRGEVVNAIIDQWSSPTLNTIIGEAMLRLV-------ESRFTGVLHVT--G 216 Query: 218 GPVSWADFAEYI--FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 +S DFA+ I +++ E K R+ Y KA RP S L + NI Sbjct: 217 PRMSRFDFAKAIARYFKFNE---DLVKPIRLSDVNY--KARRPRDSSLSNKRALGILNI 270 >gi|117922141|ref|YP_871333.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117614473|gb|ABK49927.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 309 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 20/243 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + +F P+VI++ AA D +E PE A ++N + +A+ A + Sbjct: 43 LDLTQAAEVEAFIAREQPEVIVHCAAERRPDVSERSPEHALALNLSASQTLAEVAKTHQA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG + P E + NP+N YG+SKL GE V + + + +LR +Y Sbjct: 103 WLLYISTDYVFDG-TTPPYAEDAVPNPVNFYGESKLQGETCVLNTDSGFAVLRLPILYGE 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + +L +++L + R V PTS IA AI ++ + +D S GI Sbjct: 162 VTQLSESAVLVLIKLLLDSRPQRVDHWAIRAPTSTADIANAIAKLIQRQLHAADVS--GI 219 Query: 211 FHMTADGGPVSWA---DFAEYIFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCS 266 +H +A + E + ++A + +Q P A RP L C Sbjct: 220 YHFSATQTMTKYQMLISLGELLGIDTAH----------LLPEQTPMDSAKRPQDCTLSCG 269 Query: 267 KLA 269 +LA Sbjct: 270 RLA 272 >gi|159904976|ref|YP_001548638.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6] gi|159886469|gb|ABX01406.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6] Length = 285 Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 11/183 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + SPD ++N AA T VD E E E+A+ NA A I K G Sbjct: 48 LDVTNEQKVQKLIYDISPDFVVNTAAMTNVDLCEKEKELAYKSNALLAEYIGKVCKKTGS 107 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS--YTNNYVI-LRTAWV 150 +ISTDYVFDG+ + E P NP+N YG +K GE + Y N ++ + T + Sbjct: 108 KLCHISTDYVFDGVKGNYV-ETDPINPINYYGFTKAEGERLLNEIDYDNKSIVRISTPYG 166 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 +S NF +L K + I++V DQ+ T T+ L ++ +++ I+N D L GI Sbjct: 167 FSPVKLNFYTWVLESLKCEKPINIVTDQYTTSTNLLDLSEFMLK-----IQNDD--LSGI 219 Query: 211 FHM 213 H Sbjct: 220 IHF 222 >gi|256421363|ref|YP_003122016.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] gi|256036271|gb|ACU59815.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] Length = 297 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 27/234 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-PD------------IDLLKPKDFASF 45 MK L+ G+NG + Q L + ++D ++I GR P+ +L Sbjct: 1 MKVLITGSNGLLGQHLIPVFLEDSRYQVIASGRGPNRLPQQTGYIYEATNLRDATSVKHL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + PD++I+ AA T VD E ++ + N + KAA++ I++STD+VFD Sbjct: 61 LDKYQPDIVIHAAAMTQVDDCERNKDLCWDTNVAATRYLLKAAEAHNTFFIFLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLS 161 GL + P E NP++ YG SK+A E V + I+RT VY I SN + Sbjct: 121 GL-KGPYAEEDAVNPISYYGSSKVAAENMVRGSKLPWAIVRTVLVYGIAADSKRSNIITW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + ++ +++ VV DQ+ TPT +A +A D G FH++ Sbjct: 180 VKNNLEQGKKLKVVDDQWRTPTLVQDLAVGCKLVA-------DKKAAGTFHISG 226 >gi|168333505|ref|ZP_02691774.1| DTDP-4-dehydrorhamnose reductase, rfbD ortholog [Epulopiscium sp. 'N.t. morphotype B'] Length = 263 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 34/290 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +IG+ ++ + L + V+++E++ ++D+ D + P++IIN A Sbjct: 3 KVWLIGSTSKVGKELLKLLDVREIELLDTDVNEVDITNISDVYKYARMNRPEIIINCANA 62 Query: 61 TA---VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 VDK + +NA A I+ AA I I++S+ VF TP EF Sbjct: 63 KETLDVDKI-------YKVNAVAAKNISLAAHDIDAKLIHLSSCEVFGNDKETPYTEFDL 115 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P IYG SK+AGE V + + Y+I+R Y F+ ++ KE + I + Sbjct: 116 PTPNTIYGLSKMAGERYVRDFKSKYIIIRRGLTY----GGFIQDVIDACKENKSIDAPKN 171 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QF PTS +A+ I+ + I + D GI+H G P + E Sbjct: 172 QFIQPTSPKDLAKLIVSV----INSKDY---GIYHAVNTGAPSKY------------EIA 212 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ + + A +Y L+ L N I +W+EG+ + L Sbjct: 213 VEIARILKSSSHITAVDADEKSYKILENFMLEKVKNYSIGSWQEGLEDYL 262 >gi|239788389|dbj|BAH70880.1| ACYPI005374 [Acyrthosiphon pisum] Length = 300 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 41/311 (13%) Query: 1 MKCLVIGNNGQIAQSLS---------SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP 51 MK + G +G + +S+ ++C + G ++LL + + P Sbjct: 1 MKLFLTGASGLLGRSIYERFLNEPDWTVCGISFKRTSPGLTKLNLLDKDAVTNLLNTVCP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI++ AA DK E +P+ A+ +N + +A A+ + +P +YISTDYVF+G +P Sbjct: 61 DVIVHCAAERFPDKVESDPQAAYDLNVGVSAHLADVANHLNVPLLYISTDYVFNG-DESP 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSMLRL 165 E +P+N YG+ KL GE+ V + N +ILR +Y S +LL L+ Sbjct: 120 YKETDEPSPINEYGRLKLLGEKAVLAANLNNIILRIPVLYGPVESLEESAITYLLIGLKK 179 Query: 166 AKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIEN---SDTSLRGIFHMTADGGPVS 221 + E+ V + + P+S IA I NL+E S + GI+ Sbjct: 180 CQNNNELFKVSNYELRNPSSVDDIA----HIVFNLVEKKILSSNDISGIYQ--------- 226 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQY-----PTKAHRPAYSCLDCSKLANTHNIRI 276 W Y ++ + +K++ + +Q + RP + LD S++ Sbjct: 227 WCGKEMYTKYDMVAK---MAKIFDMSMEQVVPVNGQSGVKRPFNTLLDVSRINQLGIGTH 283 Query: 277 STWKEGVRNIL 287 + +++G++ +L Sbjct: 284 TNFEDGIKTVL 294 >gi|217971668|ref|YP_002356419.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] gi|217496803|gb|ACK44996.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] Length = 304 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 6/185 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P +F P VI++ AA D +E P+ A ++N + A+A AA + Sbjct: 43 LDLTAPLAVEAFIAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ E + T+P+N YG+SKL GEE V + + ++ +LR +Y Sbjct: 103 WLIYISTDYVFDG-TQPKYAEDAATDPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQ 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ ERR V +PTS IA+AI ++ IE ++GI Sbjct: 162 VEKLSESAVLVLVNQLIERRAQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAP--IVQGI 219 Query: 211 FHMTA 215 +H +A Sbjct: 220 YHFSA 224 >gi|13541731|ref|NP_111419.1| dTDP-4-dehydrorhamnose reductase [Thermoplasma volcanium GSS1] gi|14325137|dbj|BAB60062.1| dTDP-4-dehydrorhamnose reductase [Thermoplasma volcanium GSS1] Length = 280 Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L+ G+ GQ+ + L + + G+ +D+ + A F SPD++IN AA+T V Sbjct: 5 LIFGHTGQLGRELLKLVPNAISGSINGKR-VDITDYSEIALLFSQASPDIVINSAAFTNV 63 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+ E E E A+ +NA G I K D I ISTDYVF+G R E +P+N Sbjct: 64 DRCEKEREKAYLVNAIGVRNIVKLCDKYNSKLIQISTDYVFNG-ERGNYKEDDIPDPINY 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG +K G+ S ++N +++RT+ V+ +NF L + K E+ V+ + +P Sbjct: 123 YGYTKSIGDAYALS-SDNTIVVRTSGVFG-NANNFPLFVYNRLKAGLEVDVIKGYY-SPI 179 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +++A+ + S + RGI ++ G +S D A I A R G K+ Sbjct: 180 HANLLSKALYVLI------SKGTHRGIINIA--GQRISRFDLATAI----ANRFGFDQKL 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCS 266 R A RP S LD S Sbjct: 228 IREVPDLKEMVARRPFDSSLDIS 250 >gi|319902306|ref|YP_004162034.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] gi|319417337|gb|ADV44448.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] Length = 311 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 23/259 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ K F P +IN +A + D E E A +IN +A+ + Sbjct: 63 IDIRDCKALNKLFEEVQPYAVINTSALSVPDYCEIHHEEAEAINITAVMHLAQHCRTHNS 122 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 I++STD+VFDG ++ E P+N YGK+KL GE ++A+ N+Y I R VY Sbjct: 123 RLIHLSTDFVFDGNTKRLYTEEDTPAPVNYYGKTKLEGERQIATICNDYAIARVVVVYGN 182 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI---IQIAHNLIENSDT 205 G+ F L RL + EI VV DQ+ TPT +++ + I HN Sbjct: 183 ALPGQHGNIFQLVANRL-RNNEEIFVVSDQWRTPTFVGDVSQGVEKLINHPHN------- 234 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 GI+H+ G ++ A A + + G S + I T++ K RP +S L Sbjct: 235 ---GIYHICG-GDCLTIAGIA---YRVADILGLDRSLICPISTEEMKEKTPRPCFSGLSI 287 Query: 266 SKLANTHNIRISTWKEGVR 284 K + T EG+R Sbjct: 288 EKARKELKYQPHTLDEGIR 306 >gi|225352522|ref|ZP_03743545.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156716|gb|EEG70110.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 473 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 27/296 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---IINPA 58 + +V G NG++ +++ +D + D D D A F + D+ IIN A Sbjct: 189 RTMVFGCNGKLGKAIRQYA-EDHHLEGFEYHDTDTFDISD-AHAFENVDWDLYGTIINAA 246 Query: 59 AYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDE- 114 A+TAVD AE + + A+ N +G +AK A I ++IS+DYVFDG L DE Sbjct: 247 AFTAVDAAETAEGRKAAWLTNVQGVKNLAKVATDHKITLVHISSDYVFDGELEFHKEDEG 306 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F+ PL +YG++K AG+ V + +Y +LR++WV G NF+ ML LA+ Sbjct: 307 FA---PLGVYGQTKAAGDALVENVPQHY-LLRSSWVIGE-GRNFVTRMLGLAQSGEPAEA 361 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG T +A AI + E G ++MT G SW D A+ I +E+A Sbjct: 362 PRDQFGRLTFTFDMANAIFHLLTTHAE------YGTYNMTGSGKVASWYDIAK-IVYETA 414 Query: 235 ERGGPYSKVYRIFTKQYPTKAH---RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E S + ++Y H RP LD SKL +T + W+E + + L Sbjct: 415 E--ADISALKANSVEEYVQNTHGALRPRNCSLDLSKLESTGYAPVD-WEEALHDYL 467 >gi|119903023|ref|XP_585042.3| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Bos taurus] gi|297480021|ref|XP_002691166.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Bos taurus] gi|296482879|gb|DAA24994.1| methionine adenosyltransferase 2 subunit beta-like [Bos taurus] Length = 334 Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 114/255 (44%), Gaps = 27/255 (10%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL F P VI++ AA D E+ P+ A +N + +G Sbjct: 60 FRRARPKFEQVNLLDSNAVHHIIYDFQPHVIVHCAAERRPDVVENHPDTASQLNVDASGN 119 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY- 142 +AK A +IG IYIS+DYVFDG + P E NPLN+YGK+KL GE+ A NN Sbjct: 120 LAKEAAAIGAFLIYISSDYVFDG-TNPPYREEDIPNPLNLYGKTKLEGEK--ADLENNLG 176 Query: 143 -VILRTAWVYS----IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 +LR +Y + S + ++ + ++ Q PT +A Q+A Sbjct: 177 AAVLRIPVLYGEVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAE 236 Query: 198 NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPT 253 + D S++G FH W+ + +E A+ S R T Sbjct: 237 KRM--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVV 285 Query: 254 KAHRPAYSCLDCSKL 268 AHRP + LDCS+L Sbjct: 286 GAHRPRNAQLDCSRL 300 >gi|224500274|ref|ZP_03668623.1| hypothetical protein LmonF1_11609 [Listeria monocytogenes Finland 1988] Length = 166 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 6/143 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGE----EKVAS 137 NPLN YG +KLAGE EK+A Sbjct: 121 NPLNQYGIAKLAGEKVALEKIAK 143 >gi|186680756|ref|YP_001863952.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186463208|gb|ACC79009.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 735 Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 123/269 (45%), Gaps = 21/269 (7%) Query: 5 VIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++G G + + + +C V+ + + R D+D+ P P ++N A Y V Sbjct: 463 IVGATGTLGNAFARLCQVRGISYCLLRRQDMDIANPASVNKALAELQPWAVVNAAGYVRV 522 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EP+I +NAEGA +A A + + S+D VFDG P E PLNI Sbjct: 523 DDAEREPDICLKVNAEGAAILAAACAQHNVALVTFSSDLVFDGAESNPYVETDTVAPLNI 582 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISVVCDQF 179 YG SK+ E+ V +++RT+ + FG NF+ LR D Sbjct: 583 YGCSKVLAEKLVLQAHPASLMIRTS---AFFGPWDEYNFVTIALRQLAAGNTFVAAEDAI 639 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG- 238 +PT + A + + LI+ +G++H+ A+ V+WAD A +A++ G Sbjct: 640 VSPTYVPDLVHASLDL---LIDGE----KGLWHL-ANKSAVAWADLARL----AAKKAGV 687 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 S + T++ A RPAYS L ++ Sbjct: 688 SVSNLIARPTQELGFIAPRPAYSVLGSNR 716 >gi|304411499|ref|ZP_07393112.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|307306725|ref|ZP_07586467.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] gi|304350026|gb|EFM14431.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|306910693|gb|EFN41122.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] Length = 304 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 20/263 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P +F P VI++ AA D +E P+ A ++N + A+A AA + Sbjct: 43 LDLTAPLAVEAFIAREQPQVIVHCAAERRPDVSERNPQAALALNLTASQALAMAAKANNA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ E + T+P+N YG+SKL GEE V + + ++ +LR +Y Sbjct: 103 WLIYISTDYVFDG-TQPKYAEDAVTHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQ 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ ERR V +PTS IA+AI ++ IE ++GI Sbjct: 162 VEKLSESAVLVLVNQLIERRAQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAP--IVQGI 219 Query: 211 FHMTADGGPVSWADFAEY--IFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSK 267 +H +A + I S P S PT A RP L C++ Sbjct: 220 YHFSAAETMTKYQMLLTLGDILQLSTAHLTPEST---------PTDNAKRPRDCSLSCAR 270 Query: 268 LANTHNIRIST-WKEGVRNILVN 289 LA T IR + G R L Sbjct: 271 LA-TLGIRTDIDFATGARQALTQ 292 >gi|293369744|ref|ZP_06616320.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|292635166|gb|EFF53682.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] Length = 303 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 113/241 (46%), Gaps = 35/241 (14%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS+ C Q PDI D+ D + Sbjct: 3 KILIIGANGFTGRQIVNDLSA-CKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVSH 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N G +A + I++STD+VF Sbjct: 62 LFKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVF 121 Query: 105 DG-LSRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-----FG 155 DG ++ T ++ + P+N YG +K GEE+VA ++Y I+R VY G Sbjct: 122 DGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQHG 181 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + L M RL K +EI VV DQ+ TPT ++ +++ LIE+ + GIFH+ Sbjct: 182 NIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVLR----LIEH---TANGIFHICG 233 Query: 216 D 216 D Sbjct: 234 D 234 >gi|170099672|ref|XP_001881054.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643733|gb|EDR07984.1| predicted protein [Laccaria bicolor S238N-H82] Length = 297 Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 15/209 (7%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEII-------RVGRPDIDLLKPKDFASFFLSFSPD 52 M+ +V G +G + ++ ++ V+++ R G +DL + +D F F PD Sbjct: 1 MRVIVTGASGVLGSAVHNAFKTTGVDVLGLSYSRAREGLEQLDLTRKEDVEKVFSQFKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I+ AA D AE +PE A +NA+ +A + S+ +YISTDYVFDG S P Sbjct: 61 WVIHCAAERRPDVAEKDPESAQRLNADVPAYLASLSKSLKFKLVYISTDYVFDGTS-PPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSN---FLLSMLRLAKE 168 SPTNPL +YG++K GE V + + VI LR +Y N + +L + ++ Sbjct: 120 TPSSPTNPLQLYGRTKRDGEVSVLTVDSAKVIVLRVPVLYGPAPKNSDSAINILLDVVQD 179 Query: 169 RREISVVCDQFGT--PTSALQIARAIIQI 195 R D + T PT+ + IA ++++ Sbjct: 180 RSGKKYNMDHYATRYPTNTIDIANFLVRL 208 >gi|48477380|ref|YP_023086.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Picrophilus torridus DSM 9790] gi|48430028|gb|AAT42893.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Picrophilus torridus DSM 9790] Length = 269 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 16/218 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ L ++ D E+I++ D+D K L +PD+IIN AA T Sbjct: 3 KILIFGSSGQLGSQLINLLKDDYELIKISHKDLDFNKFYLIEDIILKNNPDIIINCAALT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+ E A+++NA I + I ISTDYVF+G++ ++ P +P+ Sbjct: 63 DVDRCEIYKNEAYNVNAGAVRHIIRPLKVTESYFINISTDYVFNGITGNYREDDLP-DPV 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG +KL G+ SY N +I+RT+ V+ F + + + E + ++ + + + Sbjct: 122 NYYGLTKLLGDIYANSYDNT-LIIRTSGVF--LNKGFPVFVYKNLMENKRVTAIPGYY-S 177 Query: 182 PTSALQIARA-----------IIQIAHNLIENSDTSLR 208 P SA +A A I+ IA N I D +LR Sbjct: 178 PISAFNLAMAIKDIIPLNRTGILNIAGNKISRYDLALR 215 >gi|114051822|ref|NP_001039991.1| methionine adenosyltransferase 2 subunit beta [Bos taurus] gi|122135265|sp|Q29RI9|MAT2B_BOVIN RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|88954131|gb|AAI14152.1| Methionine adenosyltransferase II, beta [Bos taurus] gi|296485092|gb|DAA27207.1| methionine adenosyltransferase 2 subunit beta [Bos taurus] Length = 334 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E+ P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIYDFQPHVIVHCAAERRPDVVENHPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E NPLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAIGAFLIYISSDYVFDG-TNPPYREEDIPNPLNLYGKTKLEGEKAVLENNLGAAV 179 Query: 145 LRTAWVYS----IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPVLYGEVERLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCS+L Sbjct: 289 RPRNAQLDCSRL 300 >gi|255030408|ref|ZP_05302359.1| hypothetical protein LmonL_17331 [Listeria monocytogenes LO28] Length = 137 Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 2/135 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEE 133 NPLN YG +KLAGE+ Sbjct: 121 NPLNQYGIAKLAGEK 135 >gi|118097242|ref|XP_414497.2| PREDICTED: similar to Methionine adenosyltransferase II, beta [Gallus gallus] Length = 334 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 109/253 (43%), Gaps = 40/253 (15%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL F P VI++ AA D E +P+ A +N +G +AK A IG Sbjct: 70 VNLLNSVAVHDIIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVAASGNLAKEAAGIGA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 IYISTDYVFDG S P E NPLN+YGK+KL GE+ V +LR +Y Sbjct: 130 FLIYISTDYVFDGTS-PPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG- 187 Query: 154 FGSNFLLSMLRLAKERREISVVCD--QFGT------------PTSALQIARAIIQIAHNL 199 + RL E ++V+ D QF PT+ +A Q+A Sbjct: 188 -------EVERL--EESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKR 238 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 239 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDCPVVGA 287 Query: 256 HRPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 288 LRPRNAQLDCSKL 300 >gi|323476572|gb|ADX81810.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus HVE10/4] Length = 275 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 148/298 (49%), Gaps = 33/298 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPDI-DLLKPKDFASFFLSFS 50 M+ ++IG +GQ+ LS + + E+I+ R D+ D L +DF Sbjct: 1 MRIMIIGASGQLGLELSRK-LSNYELIKTFALHELSEGLRLDLTDYLSLEDFII---KKK 56 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P++IIN AA T VDK E E E AF INAE I +A+ I I ISTDYVFDG Sbjct: 57 PEIIINAAALTDVDKCEVEREKAFKINAEAVKHIVRASRVIEAYLIQISTDYVFDGNEGL 116 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 ++ P NP+N YG +KL GE +SY ++ +I+RT+ V+ G F + + + KE + Sbjct: 117 YKEDDLP-NPINYYGLTKLLGENYASSY-DDTLIVRTSGVFRNKG--FPVYVYKNLKEGK 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ + F +P SA ++A AI + L+ T GI ++ G +S D A+ I Sbjct: 173 EV-LAFKGFYSPISATKLAEAI----NELVTYKKT---GIINIA--GERISRYDLAQRI- 221 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G +V RI A RP S LD SK +I + E ++ I++ Sbjct: 222 KELYNLSGKVIEVDRI----EGWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKYIVI 275 >gi|325105059|ref|YP_004274713.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145] gi|324973907|gb|ADY52891.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145] Length = 302 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 20/207 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-------------PDIDLLKPKDFASFF 46 K LV G+NG + Q L+ +++ E+I G+ ++D++ + A Sbjct: 3 KILVTGSNGLLGQKLTDAVLKNKQFELIATGKGTNRHPVKEGYIYEEMDIIDKESIAFIV 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PD IIN AA T VD E + E + +N + I I++STD++FDG Sbjct: 63 NKHQPDAIINTAAMTNVDTCETQREECWLLNVTAVEYLIDICRENSIQLIHLSTDFIFDG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSM 162 P E NPL+ YG+SKLA E+ + +Y ILRT VY I SN +L Sbjct: 123 -EDGPYTEEGQPNPLSYYGESKLAAEQLLEKSGIHYAILRTIIVYGIVNDMSRSNIILWA 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIA 189 ++ I+VV DQ+ PT A +A Sbjct: 182 KGALEKGNPINVVNDQWRMPTLAEDLA 208 >gi|172035069|ref|YP_001801570.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51142] gi|171696523|gb|ACB49504.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51142] Length = 292 Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 4/173 (2%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 + I R+ +D+ ++ + F PD +I+ AA + + ++ PE A+ IN + Sbjct: 36 INIDRINCFKVDITNIQELHTVFNEIKPDGVIHLAAASKPNYCQNNPEDAYQINVTASLN 95 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK IPC++ STD VFDGL+ +P E P +P++ YG+ K+ E+++ + V Sbjct: 96 LAKLCADGNIPCVFTSTDLVFDGLN-SPYQESDPVSPISYYGEQKVQAEQEMLAIYPKTV 154 Query: 144 ILRTAWVYSIFGSN---FLLSMLRLAKERREISVVCDQFGTPTSALQIARAII 193 I R ++ I S+ F+ L +E + +S+ D++ TP S L A+ ++ Sbjct: 155 ICRMPLMFGIPSSHAASFIQFFLTTFREGKPLSLFTDEYRTPVSGLTAAKGLL 207 >gi|320101334|ref|YP_004176926.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162] gi|319753686|gb|ADV65444.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162] Length = 298 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 16/234 (6%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 K A PD II+ AA+T VD E++ E+A+ +N IA+ A + +YIS Sbjct: 53 KSVADTVKRVKPDAIIHTAAFTDVDGCEEKKELAYRVNYLATRIIAETARELNAYLVYIS 112 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--- 156 TDYVFDG R EF P+N YG +KL GE V + +I+R + +Y + Sbjct: 113 TDYVFDG-ERGMYREFDAPAPVNYYGLTKLLGEVAVNTLAPRSLIVRVSGLYGFSPTGKR 171 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF L L ++ DQ+ +PT +A I + + G+ H+ Sbjct: 172 NFGLVALEKLMNNEQVDAFHDQYLSPTYVRPLAERIADMVKR-------EVVGVIHVA-- 222 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 G S +FA + + G P V + K +A RP S LD + A+ Sbjct: 223 GERASRYEFASKL---AEALGVPRDLVKKTSIKNAGLRARRPRDSSLDTGRAAS 273 >gi|160890313|ref|ZP_02071316.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492] gi|156860045|gb|EDO53476.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492] Length = 300 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 17/258 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PDV+IN +A + D E A ++N +A+ ++ G Sbjct: 53 DICNRQAVEKLFQEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSR 112 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VF G + P E P+N YG +KL GE+++A+ +Y I+R VY Sbjct: 113 FIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAA 172 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R E+ VV DQ+ TPT +++ + LI + GI Sbjct: 173 LPRQHGNVLQLVANRLRSNEEVFVVSDQWRTPTFVGDVSQGV----EKLISHPQN---GI 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLA 269 +H+ ++ AD A + A+ G + R + TK+ K RP +S L K + Sbjct: 226 YHLCGSEC-LTIADIA----YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAS 280 Query: 270 NTHNIRISTWKEGVRNIL 287 + T +EG++ + Sbjct: 281 RELGYQPRTLEEGIKQMF 298 >gi|326928318|ref|XP_003210327.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Meleagris gallopavo] Length = 342 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 82/272 (30%), Positives = 117/272 (43%), Gaps = 40/272 (14%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL F P VI++ AA D E +P+ A +N +G +AK A IG Sbjct: 78 VNLLNSVAVHDIIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVAASGNLAKEAAGIGA 137 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 IYISTDYVFDG S P E NPLN+YGK+KL GE+ V +LR +Y Sbjct: 138 FLIYISTDYVFDGTS-PPYKETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYG- 195 Query: 154 FGSNFLLSMLRLAKERREISVVCD--QFGT------------PTSALQIARAIIQIAHNL 199 + RL E ++V+ D QF PT+ +A Q+A Sbjct: 196 -------EVERL--EESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAVVCRQLAEKR 246 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 247 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDCPVVGA 295 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RP + LDCSKL + + ++ G++ L Sbjct: 296 LRPRNAQLDCSKLEMLGIGQRTPFRAGIKESL 327 >gi|227826955|ref|YP_002828734.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|229584126|ref|YP_002842627.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238619098|ref|YP_002913923.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] gi|227458750|gb|ACP37436.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|228019175|gb|ACP54582.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238380167|gb|ACR41255.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] Length = 275 Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 149/298 (50%), Gaps = 33/298 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPDI-DLLKPKDFASFFLSFS 50 M+ ++IG +GQ+ LS + + E+I+ R D+ D L +DF Sbjct: 1 MRIMIIGASGQLGLELSRK-LSNYELIKTFALHELSEGLRLDLTDYLSLEDFII---KKK 56 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P++IIN AA T VD+ E E E AF INAE I +A+ I I ISTDYVFDG ++ Sbjct: 57 PEIIINAAALTDVDRCEVEREKAFKINAEAVKHIVRASRVIEAYLIQISTDYVFDG-NKG 115 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E NP+N YG +KL GE +SY ++ +I+RT+ V+ G F + + + KE + Sbjct: 116 LYKEDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVFRNKG--FPVYVYKNLKEGK 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ + F +P SA ++A AI + L+ T GI ++ G +S D A+ I Sbjct: 173 EV-LAFKGFYSPISATKLAEAI----NELVTYKKT---GIINIA--GERISRYDLAQKI- 221 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G +V RI A RP S LD SK +I + E ++++++ Sbjct: 222 KELYNLSGKVIEVDRI----EGWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKHMVI 275 >gi|301782819|ref|XP_002926825.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like isoform 1 [Ailuropoda melanoleuca] Length = 323 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 23/253 (9%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL + F P VI++ AA D E++P+ A +N + +G Sbjct: 49 FRRARPKFEQVNLLDSEAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 108 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A SIG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V Sbjct: 109 LAKEAASIGAFLIYISSDYVFDG-TNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAA 167 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +LR +Y + S + ++ + ++ Q PT +A Q+A Sbjct: 168 VLRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR 227 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 228 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGA 276 Query: 256 HRPAYSCLDCSKL 268 RP + LDC+KL Sbjct: 277 QRPRNAQLDCTKL 289 >gi|281341458|gb|EFB17042.1| hypothetical protein PANDA_016526 [Ailuropoda melanoleuca] Length = 313 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 23/253 (9%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL + F P VI++ AA D E++P+ A +N + +G Sbjct: 39 FRRARPKFEQVNLLDSEAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 98 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A SIG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V Sbjct: 99 LAKEAASIGAFLIYISSDYVFDG-TNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAA 157 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +LR +Y + S + ++ + ++ Q PT +A Q+A Sbjct: 158 VLRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR 217 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 218 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGA 266 Query: 256 HRPAYSCLDCSKL 268 RP + LDC+KL Sbjct: 267 QRPRNAQLDCTKL 279 >gi|301782821|ref|XP_002926826.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like isoform 2 [Ailuropoda melanoleuca] Length = 334 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 23/253 (9%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL + F P VI++ AA D E++P+ A +N + +G Sbjct: 60 FRRARPKFEQVNLLDSEAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 119 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A SIG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V Sbjct: 120 LAKEAASIGAFLIYISSDYVFDG-TNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAA 178 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +LR +Y + S + ++ + ++ Q PT +A Q+A Sbjct: 179 VLRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR 238 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 239 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGA 287 Query: 256 HRPAYSCLDCSKL 268 RP + LDC+KL Sbjct: 288 QRPRNAQLDCTKL 300 >gi|160873576|ref|YP_001552892.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|160859098|gb|ABX47632.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|315265806|gb|ADT92659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678] Length = 304 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 6/185 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P +F P VI++ AA D +E P+ A ++N + A+A AA + Sbjct: 43 LDLTAPLAVEAFIAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ E + T+P+N YG+SKL GEE V + ++++ +LR +Y Sbjct: 103 WLIYISTDYVFDG-TQPKYAEDAATHPVNFYGESKLKGEEIVLNTSDDFAVLRLPILYGQ 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ E R V +PTS IA+AI ++ IE ++GI Sbjct: 162 VEKLSESAVLVLVNQLIESRAQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAP--IVQGI 219 Query: 211 FHMTA 215 +H +A Sbjct: 220 YHFSA 224 >gi|83523771|ref|NP_001016828.2| methionine adenosyltransferase 2 subunit beta [Xenopus (Silurana) tropicalis] gi|82178023|sp|Q566L8|MAT2B_XENTR RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|62203140|gb|AAH93462.1| methionine adenosyltransferase II, beta [Xenopus (Silurana) tropicalis] Length = 334 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 24/264 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL + F P VII+ AA D E +PE A +N + +AK A +G Sbjct: 70 LNLLDAAAVKALIQDFKPHVIIHCAAERRPDIVESQPEFASLLNVVASENLAKEAAGVGA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IY+S+DYVFDG S P E S NPLN+YGK+KL GE V +LR +Y Sbjct: 130 FLIYVSSDYVFDGTS-PPYREDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYGD 188 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S L ++ + + + +F PT +A +Q+ ++ D S+ Sbjct: 189 VEKLSESAVTILFDKVQFSNKSANMDHWQQRF--PTYVKDVASVCLQLTERRLQ--DPSI 244 Query: 208 RGIFHMTADGGPVSWADFAEYIFWE----SAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 +GI+H W+ + +E A+ S R T + RP L Sbjct: 245 KGIYH---------WSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVGATPRPWNPQL 295 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 DCSKL + + ++ G+R L Sbjct: 296 DCSKLEKIGIGQRTPFRVGIRESL 319 >gi|224068185|ref|XP_002189542.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 333 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 79/257 (30%), Positives = 112/257 (43%), Gaps = 40/257 (15%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P VI++ AA D E +P+ A +N + +AK A +G IYISTDYVFDG S Sbjct: 84 FQPHVIVHCAAERRPDVVEGQPDAASQLNVAASANLAKEAAGVGAFLIYISTDYVFDGTS 143 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P E NPLN+YGK+KL GE+ V +LR +Y + RL E Sbjct: 144 -PPYKETDVPNPLNLYGKTKLEGEKAVLENNEETAVLRIPVLYG--------EVERL--E 192 Query: 169 RREISVVCD--QFGT------------PTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 ++V+ D QF PT+ +A Q+A + D S++G FH Sbjct: 193 ESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVAAVCRQLAEKRM--LDPSIKGTFH-- 248 Query: 215 ADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 W+ + +E A+ S R T A RP + LDCSKL Sbjct: 249 -------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGALRPKNAQLDCSKLEM 301 Query: 271 THNIRISTWKEGVRNIL 287 + + ++ G+R L Sbjct: 302 LGIGQRTPFRAGIRESL 318 >gi|269986680|gb|EEZ92960.1| dTDP-4-dehydrorhamnose reductase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 282 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 32/287 (11%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV+G +G I L +S E G +D+ ++ + P++I Sbjct: 1 MKTLVLGGSGFIGYYLAKYFNATSASAHQKE----GYIKLDITDKEEVSEVLNKIKPELI 56 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN A VD E E E A +N ++ + IG + ISTDYVFDG + +E Sbjct: 57 INSTAIADVDLCEKEKETAMLVNGYAVEWLSSLSKEIGAEFVQISTDYVFDGFTGNYKEE 116 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN----FLLSMLRLAKERR 170 +P NP+N YGKSKL GEE + N+ ++LR Y I + F S++ KE + Sbjct: 117 DNP-NPINEYGKSKLIGEEN--ALKNDAIVLRIEMPYGINVAKNKNVFFESVINNLKEGK 173 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ DQ +PT I +A+ + GIFH+ S F+ + F Sbjct: 174 TVNAAVDQIISPTFVEDIPKAVEVLVK-------KGANGIFHLA------SKEHFSRFEF 220 Query: 231 WESAERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + K + + + A RP + L+ K++ + I+ Sbjct: 221 VNIIADVFNFDKTIIKPVKLADFKMLAKRPKNTFLNIDKISKFYEIK 267 >gi|126290739|ref|XP_001370026.1| PREDICTED: similar to methionine adenosyltransferase regulatory beta subunit isoform 2 [Monodelphis domestica] Length = 323 Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 22/263 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL F P VI++ AA D E++P+ A +N + +G +AK A IG Sbjct: 59 VNLLDTHAVHDIIQDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAGIGA 118 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYIS+DYVFDG + P E NPLN+YGK+KL GE+ V +LR +Y Sbjct: 119 FLIYISSDYVFDG-TNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYGE 177 Query: 152 --SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + S + ++ + ++ Q PT+ +A Q+A + D +++G Sbjct: 178 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRM--LDPTIKG 235 Query: 210 IFHMTADGGPVSWADFAEYIFWESA-----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 FH W+ + +E A P S + R T A RP + L+ Sbjct: 236 TFH---------WSGNEQMTKYEMACAIADAFNLPNSHL-RPVTDSPVLGAPRPRNAQLN 285 Query: 265 CSKLANTHNIRISTWKEGVRNIL 287 CSKL N + + ++ G++ L Sbjct: 286 CSKLENLGIGQRTPFRVGIKESL 308 >gi|126290742|ref|XP_001369996.1| PREDICTED: similar to methionine adenosyltransferase regulatory beta subunit isoform 1 [Monodelphis domestica] Length = 334 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 26/265 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL F P VI++ AA D E++P+ A +N + +G +AK A IG Sbjct: 70 VNLLDTHAVHDIIQDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAGIGA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 IYIS+DYVFDG + P E NPLN+YGK+KL GE+ V +LR +Y Sbjct: 130 FLIYISSDYVFDG-TNPPYTEDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYGE 188 Query: 154 F------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 + ++ + + + +F PT+ +A Q+A + D ++ Sbjct: 189 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRF--PTNVKDVASVCRQLAEKRM--LDPTI 244 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESA-----ERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 +G FH W+ + +E A P S + R T A RP + Sbjct: 245 KGTFH---------WSGNEQMTKYEMACAIADAFNLPNSHL-RPVTDSPVLGAPRPRNAQ 294 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 L+CSKL N + + ++ G++ L Sbjct: 295 LNCSKLENLGIGQRTPFRVGIKESL 319 >gi|270296883|ref|ZP_06203082.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] gi|270272870|gb|EFA18733.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] Length = 300 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 17/258 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PDV+IN +A + D E A ++N +A+ ++ G Sbjct: 53 DICNRQAVEKLFQEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSR 112 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VF G + P E P+N YG +KL GE+++A+ +Y I+R VY Sbjct: 113 FIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAA 172 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R E+ VV DQ+ TPT +++ + LI + GI Sbjct: 173 LPGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGV----EKLISHPQN---GI 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLA 269 +H+ ++ AD A + A+ G + R + TK+ K RP +S L K Sbjct: 226 YHLCGSEC-LTIADIA----YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAH 280 Query: 270 NTHNIRISTWKEGVRNIL 287 + T +EG++ + Sbjct: 281 RELGYQPRTLEEGIKQMF 298 >gi|115530810|emb|CAL49345.1| methionine adenosyltransferase II, beta [Xenopus (Silurana) tropicalis] Length = 334 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 24/264 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL + F P VII+ AA D E +PE A +N + +AK A +G Sbjct: 70 LNLLDAAAVKALIQDFKPHVIIHCAAERRPDIVESQPEFASLLNVVASENLAKEAAGVGA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IY+S+DYVFDG S P E S NPLN+YGK+KL GE V +LR +Y Sbjct: 130 FLIYVSSDYVFDGTS-PPYREDSIPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYGD 188 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S L ++ + + + +F PT +A +Q+ ++ D S+ Sbjct: 189 VEKLSESAVTILFDKVQFSNKSANMDHWQQRF--PTYVKDVASVCLQLTERRLQ--DPSI 244 Query: 208 RGIFHMTADGGPVSWADFAEYIFWE----SAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 +GI+H W+ + +E A+ S R T + RP L Sbjct: 245 KGIYH---------WSGNEQMTKYEMTCAMADAFNLPSSHLRPITDEPVGATPRPWNPQL 295 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 DCSKL + + ++ G+R L Sbjct: 296 DCSKLEKIGIGQRTPFRVGIRESL 319 >gi|153806520|ref|ZP_01959188.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185] gi|149131197|gb|EDM22403.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185] Length = 305 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 19/194 (9%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ F + PDV+IN +A + D E E A+ IN +A Sbjct: 52 EVDIRNEASVKELFKAICPDVVINCSALSVPDYCETHHEEAYLINVTAVEQLAHLCKEYQ 111 Query: 93 IPCIYISTDYVFDG-----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 I++STD+VFDG + +E P P+N YG +K GEEKVA +NY I R Sbjct: 112 SRFIHLSTDFVFDGKINERTGQLYTEEILPA-PVNYYGFTKWKGEEKVADICSNYAIARV 170 Query: 148 AWVY-----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 VY G+ L M RL K +EI VV DQ+ TPT ++ I LIEN Sbjct: 171 EIVYGKALPGQHGNIVQLVMNRL-KAGQEIRVVSDQWRTPTFVGDLSDGI----QRLIEN 225 Query: 203 SDTSLRGIFHMTAD 216 + GIFH+ D Sbjct: 226 TAN---GIFHICGD 236 >gi|237718115|ref|ZP_04548596.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4] gi|229452536|gb|EEO58327.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4] Length = 303 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 78/241 (32%), Positives = 111/241 (46%), Gaps = 35/241 (14%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS+ C Q PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSA-CKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVRH 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N G +A + I++STD+VF Sbjct: 62 LFKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVF 121 Query: 105 DG-LSRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-----FG 155 DG ++ T ++ + P+N YG +K GEE+VA ++Y I+R VY G Sbjct: 122 DGKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQHG 181 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + L M RL K +EI VV DQ+ TPT ++ +++ LIE+ + GIFH Sbjct: 182 NIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVLR----LIEH---TANGIFHTCG 233 Query: 216 D 216 D Sbjct: 234 D 234 >gi|48591|emb|CAA79353.1| WbbW [Yersinia enterocolitica] gi|318605011|emb|CBY26509.1| dTDP-4-dehydrorhamnose reductase [Yersinia enterocolitica subsp. palearctica Y11] Length = 289 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 10/200 (5%) Query: 2 KCLVIGNNGQI-AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G G + A S++ D +I R ++L P+ S+ + PDVI++ AA Sbjct: 4 KILITGGTGMLGAYVTSALKDTDYNVIVTERNTLNLSVPEAIFSYITAEKPDVILHFAAE 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E EP A N IA+AA G +Y+S+ VF G + +E P Sbjct: 64 TDVDLCEREPARAGIYNHLATEQIAQAAKFCGAWLLYLSSSNVFGGEGKLSYNELDIPLP 123 Query: 121 LNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKE-RREIS 173 +N YG+SKL GE V + TNN++I+R W+ I G F+ +++ K I Sbjct: 124 MNYYGRSKLIGESSVRNACTNNHLIIRAGWM--IGGGPDKDHKFVGKIIQQIKAGSTSIK 181 Query: 174 VVCDQFGTPTSALQIARAII 193 V D+ G+ TSA+Q+ II Sbjct: 182 AVSDRLGSITSAMQLCNFII 201 >gi|3832509|gb|AAC70777.1| dTDP-4-keto-L-rhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 2/122 (1%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 ++ STDYVFDG E T PLN+YG++K AGE + ++I RT+WVY+ G Sbjct: 100 VHYSTDYVFDGAGSHYRREDEATGPLNVYGETKRAGELALQQGNPRHLIFRTSWVYATRG 159 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 +NF +MLRLA E+ ++++ D PT A +A + N +L G +H+ A Sbjct: 160 ANFAKTMLRLAGEKETLTIIDDLLWAPTGAELLADCTATAIRETLRNP--ALAGTYHLVA 217 Query: 216 DG 217 G Sbjct: 218 SG 219 >gi|302348458|ref|YP_003816096.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15] gi|302328870|gb|ADL19065.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15] Length = 283 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/256 (29%), Positives = 118/256 (46%), Gaps = 20/256 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + SPDVIIN A T VD E + A +NAE +A+A +G Sbjct: 47 LDVTNFELLEDLIIKVSPDVIINAVAMTNVDACESDRARALKVNAEAVKHVARAVRVVGS 106 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++STDYVFDG ++ P NP+N YG +KL GE SY ++ V+ RT+ V+ Sbjct: 107 YMIHVSTDYVFDGTKGLYREDEEP-NPINYYGLTKLLGEAYALSYDDSLVV-RTSGVFRD 164 Query: 154 FG-SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 G +F++ LR + + + F +P SA ++A AI+ +A LR Sbjct: 165 KGFPSFVVRQLRQGRAVKAYA----GFYSPISARKLAEAILALAE---------LRKTGI 211 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + G VS A + P ++V + A RP S LD S+ Sbjct: 212 INVAGERVSRYQLAVEVAKAFGLDPSPVTEVKEV----EGWVAKRPYDSSLDISRARALL 267 Query: 273 NIRISTWKEGVRNILV 288 N + +E +R+ +V Sbjct: 268 NFDFYSLRENLRHAVV 283 >gi|198274918|ref|ZP_03207450.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135] gi|198272365|gb|EDY96634.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135] Length = 305 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 17/243 (6%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PDV+++ AA +A D AE A ++N E +A++ + I++STD+VF G + Sbjct: 67 QPDVVVHTAAMSATDYAETHHAEAQAVNVEAVRWLAQSCEKHHCRLIHLSTDFVFGGDTS 126 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-----FGSNFLLSMLR 164 E +P+N YG++K E+ VAS +Y I R VY G+ L + R Sbjct: 127 RLYTEADTPSPVNYYGRTKWESEKVVASLCRDYAIARIVVVYGAPYPGQHGNIVSLVINR 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L + +EI V DQ+ TPT ++Q LIE + GI+H+ G ++ AD Sbjct: 187 L-QNHQEIRVADDQWRTPT----YVGDVVQGVEKLIEQ---PVCGIYHICG-GECMTVAD 237 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A + G S + + T K RP +S L K R T++EGVR Sbjct: 238 MA---LRTADTLGLDRSLILPVHTAAMQEKTPRPRFSGLSIEKARRELGYRPLTFEEGVR 294 Query: 285 NIL 287 ++L Sbjct: 295 SML 297 >gi|291387774|ref|XP_002710406.1| PREDICTED: methionine adenosyltransferase II, beta isoform 2 [Oryctolagus cuniculus] Length = 323 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N +G + Sbjct: 50 RRARPKFEQVNLLDSDAVHHIIHEFQPHVIVHCAAERRPDVVENQPDAASQLNVNASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAIGAFLIYISSDYVFDG-TNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNAQLDCSKL 289 >gi|152998986|ref|YP_001364667.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] gi|151363604|gb|ABS06604.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] Length = 304 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 18/242 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P +F P VI++ AA D +E P+ A ++N + A+A A + Sbjct: 43 LDLTAPLAVEAFIAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAVKANNA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ E + T+P+N YG+SKL GEE V + + ++ +LR +Y Sbjct: 103 WLIYISTDYVFDG-TQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQ 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ +RR V +PTS IA+AI ++ IE ++GI Sbjct: 162 VEKLSESAVLVLVNQLIDRRAQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAP--IVQGI 219 Query: 211 FHMTADGGPVSWADFAEY--IFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSK 267 +H +A + I S P S PT A RP L C++ Sbjct: 220 YHFSAAETMTKYQMLLTLGEILQLSTAHLTPEST---------PTDNAKRPRDCTLSCTR 270 Query: 268 LA 269 LA Sbjct: 271 LA 272 >gi|320104538|ref|YP_004180129.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644] gi|319751820|gb|ADV63580.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644] Length = 318 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 21/226 (9%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDVEIIRV----GRPDIDLLKPKDFASFFLSFSPDVI 54 LV+G +GQI +SL+ + V + G +DL + + + P +I Sbjct: 18 ALVVGGSGQIGGWLLESLARRGLPAVGTHQTTPAPGTVPLDLGDAQSVEALLVELRPPLI 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYISTDYVFDGLSRTPI 112 PA +T VD E +P + N +A+ A I + I+ STDYVFDG + P Sbjct: 78 FLPAGFTWVDGCERDPVRCDAANRREPIRLARLASRIVPEVRVIHFSTDYVFDG-AHGPD 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSI--FGSNFLLSMLRLAKER 169 DE + NPL+ YG++KLA E ++ +I+RT WV+ G NF + R +E Sbjct: 137 DEEAIPNPLSEYGRAKLAAERELTELLGERLLIIRTTWVFGPERQGKNFAYQVARTLREG 196 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + + DQ PT + +A A++++A S G+ H+ Sbjct: 197 KPLVCPSDQISNPTYSPDLADAVVELALR-------SAHGLLHLAG 235 >gi|260174647|ref|ZP_05761059.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|315922911|ref|ZP_07919151.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|313696786|gb|EFS33621.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 303 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 107/242 (44%), Gaps = 37/242 (15%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS+ C Q PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSA-CKQYKVTGCSLHPDILPNNAEDYRFIETDIRNEADVKH 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N G +A + I++STD+VF Sbjct: 62 LFEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVF 121 Query: 105 DGLSRTP-----IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIF 154 DG +E P P+N YG +K GEE+VA ++Y I+R VY Sbjct: 122 DGKINEAAGLLYTEEDLPA-PVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQH 180 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G+ L M RL K +EI VV DQ+ TPT ++ + LIE++ GIFH+ Sbjct: 181 GNIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGV----QRLIEHTTN---GIFHIC 232 Query: 215 AD 216 D Sbjct: 233 GD 234 >gi|19527234|ref|NP_598778.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Mus musculus] gi|81880218|sp|Q99LB6|MAT2B_MOUSE RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|13097444|gb|AAH03457.1| Methionine adenosyltransferase II, beta [Mus musculus] gi|56206760|emb|CAI25422.1| methionine adenosyltransferase II, beta [Mus musculus] gi|148700381|gb|EDL32328.1| methionine adenosyltransferase II, beta, isoform CRA_a [Mus musculus] Length = 334 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 23/271 (8%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 61 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAIGAFLIYISSDYVFDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQ 288 Query: 257 RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RP + LDCSKL + + ++ G++ L Sbjct: 289 RPKNAQLDCSKLETLGIGQRTPFRTGIKESL 319 >gi|291387772|ref|XP_002710405.1| PREDICTED: methionine adenosyltransferase II, beta isoform 1 [Oryctolagus cuniculus] Length = 334 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N +G + Sbjct: 61 RRARPKFEQVNLLDSDAVHHIIHEFQPHVIVHCAAERRPDVVENQPDAASQLNVNASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAIGAFLIYISSDYVFDG-TNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|313482787|ref|NP_001186203.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Mus musculus] gi|26344854|dbj|BAC36076.1| unnamed protein product [Mus musculus] gi|74187532|dbj|BAE36716.1| unnamed protein product [Mus musculus] gi|148700382|gb|EDL32329.1| methionine adenosyltransferase II, beta, isoform CRA_b [Mus musculus] Length = 323 Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 23/271 (8%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 50 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAIGAFLIYISSDYVFDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQ 277 Query: 257 RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RP + LDCSKL + + ++ G++ L Sbjct: 278 RPKNAQLDCSKLETLGIGQRTPFRTGIKESL 308 >gi|332204385|gb|EGJ18450.1| rmlD substrate binding domain protein [Streptococcus pneumoniae GA47901] Length = 151 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 14/157 (8%) Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ+G PT +A Sbjct: 2 GEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQYGRPTWTRTLAE 61 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRIFTK 249 +I +A N E G +H++ D +W DFA I ++ P + + Sbjct: 62 FMIYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVEVKP------VDSS 109 Query: 250 QYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 Q+P KA RP S + +K A I TW++ ++ Sbjct: 110 QFPAKAQRPLNSTMSLAK-AKATGFVIPTWQDALQEF 145 >gi|229578392|ref|YP_002836790.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|229582800|ref|YP_002841199.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] gi|228009106|gb|ACP44868.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|228013516|gb|ACP49277.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] Length = 275 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 149/298 (50%), Gaps = 33/298 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPDI-DLLKPKDFASFFLSFS 50 M+ ++IG +GQ+ LS + + E+I+ R D+ D L +DF Sbjct: 1 MRIMIIGASGQLGLELSRK-LSNYELIKTFALHELSEGLRLDLTDYLSLEDFII---KKK 56 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P++IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG ++ Sbjct: 57 PEIIINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDG-NKG 115 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E NP+N YG +KL GE +SY ++ +I+RT+ V+ G F + + + KE + Sbjct: 116 LYKEDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVFRNKG--FPVYVYKNLKEGK 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ + F +P SA ++A AI + L+ T GI ++ G +S D A+ I Sbjct: 173 EV-LAFKGFYSPISATKLAEAI----NELVTYKKT---GIINIA--GERISRYDLAQKI- 221 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G +V RI A RP S LD SK +I + E ++++++ Sbjct: 222 KELYNLSGKVIEVDRI----EGWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKHMVI 275 >gi|56206762|emb|CAI25424.1| methionine adenosyltransferase II, beta [Mus musculus] Length = 320 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 23/271 (8%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 47 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 106 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 107 AKEAAAIGAFLIYISSDYVFDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAV 165 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 166 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRM 225 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 226 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQ 274 Query: 257 RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RP + LDCSKL + + ++ G++ L Sbjct: 275 RPKNAQLDCSKLETLGIGQRTPFRTGIKESL 305 >gi|160884444|ref|ZP_02065447.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483] gi|299146002|ref|ZP_07039070.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] gi|156110183|gb|EDO11928.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483] gi|298516493|gb|EFI40374.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] Length = 303 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 92/314 (29%), Positives = 130/314 (41%), Gaps = 43/314 (13%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS+ C Q PDI D+ D Sbjct: 3 KILIIGANGFTGRQIVNDLSA-CKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVRH 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N G +A + I++STD+VF Sbjct: 62 LFKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVF 121 Query: 105 DG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-----FG 155 DG + E P+N YG +K GEE+V ++Y I+R VY G Sbjct: 122 DGKINEAAGLLYTEKDLPAPINYYGYTKWKGEERVTETCSSYAIVRVEIVYGKALPGQHG 181 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + L M RL K +EI VV DQ+ TPT ++ +++ LIE+ + GIFH+ Sbjct: 182 NIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVLR----LIEH---TANGIFHICG 233 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 D AE + + S ++ T++ RP +S + K R Sbjct: 234 D----ECMTIAEIAYQVADYMKLDRSLIHPATTEKMNESTPRPRFSGMSIDKARTMLGYR 289 Query: 276 ISTWKEGVRNILVN 289 KE ILVN Sbjct: 290 PQKLKE----ILVN 299 >gi|149641928|ref|XP_001513330.1| PREDICTED: similar to Methionine adenosyltransferase II, beta, partial [Ornithorhynchus anatinus] Length = 313 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 20/262 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL F P VI++ AA D E++P+ A +N +G +AK A IG Sbjct: 49 VNLLDNNAVRDIIQDFQPHVIVHCAAERRPDVVENQPDAASQLNVAASGNLAKEAAGIGA 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYIS+DYVFDG + P E NPLN+YGK+KL GE+ V +LR +Y Sbjct: 109 FLIYISSDYVFDG-TNPPYREDDVPNPLNLYGKTKLEGEKAVLENNVGAAVLRIPVLYGE 167 Query: 152 --SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + S + ++ + ++ Q PT+ +A Q+A + D S++G Sbjct: 168 VEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTNVKDVASVCRQLAEKRM--LDPSIKG 225 Query: 210 IFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 +H W+ + +E A+ S R T A RP + LDC Sbjct: 226 TYH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVVGALRPRNAQLDC 276 Query: 266 SKLANTHNIRISTWKEGVRNIL 287 SKL + + ++ G++ L Sbjct: 277 SKLETLGIAQRTPFRVGIKESL 298 >gi|61806518|ref|NP_001013492.1| methionine adenosyltransferase 2 subunit beta [Danio rerio] gi|82178568|sp|Q5BJJ6|MAT2B_DANRE RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|60688479|gb|AAH91455.1| Zgc:110308 [Danio rerio] Length = 323 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 13/238 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 +LL SF P VI++ AA D E E A ++N +AK A G Sbjct: 60 NLLDEDAVRGVIQSFQPHVIVHCAAERRPDVVERHTEAAMNLNVHACATLAKEAG--GSF 117 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--- 151 IYISTDYVFDG + P E NPLN+YGKSKL GE ++ + +LR ++ Sbjct: 118 LIYISTDYVFDGRN-PPYGENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFGEV 176 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + S + R+ + ++ Q PT +AR +A ++ D SLRGI Sbjct: 177 EKVEESAVTVLFERVQEGAESCTIDHCQQRFPTYTNDVARVCRNMAERALQ--DQSLRGI 234 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 FH +A + E + P S + + + A RP + L+CS+L Sbjct: 235 FHYSAKEQMTKY----EMTCAIADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRL 288 >gi|308235687|ref|ZP_07666424.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Gardnerella vaginalis ATCC 14018] gi|311114284|ref|YP_003985505.1| bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Gardnerella vaginalis ATCC 14019] gi|310945778|gb|ADP38482.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Gardnerella vaginalis ATCC 14019] Length = 480 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 19/238 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ +++ + ++ +E V D+ D++ + IIN AA Sbjct: 189 RTLVTGCNGQLGRAIQNYAKENNLEGFEYVDLDSFDIANKDDYSRYDWDLY-GTIINTAA 247 Query: 60 YTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 YT+VD A+ A++ N +G +AK A I ++IS+DYVFDG E Sbjct: 248 YTSVDGAQTLQGRRAAWNSNVKGVANLAKIAQEHHITLVHISSDYVFDGTQENH-KENED 306 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA---KERREISV 174 PL +YG++K A + VA+ +Y+I R++W+ G NF+ M+ A K +SV Sbjct: 307 FAPLGVYGETKAAADSLVANVPQHYII-RSSWIVGE-GRNFVTRMIDFANRLKNGESVSV 364 Query: 175 VC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 DQ G T A + + + + + + G +++T G SW D A+ +F Sbjct: 365 QAPIDQTGRLTFASDLVKGMFHLLNTQAQ------YGTYNLTGSGKIASWHDIAQKVF 416 >gi|24375660|ref|NP_719703.1| NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] gi|24350574|gb|AAN57147.1|AE015849_14 NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] Length = 306 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 6/185 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + +F P+VI++ AA D +E PE A ++N + +AKAA G Sbjct: 43 LDLTQAIAVEAFIARERPEVIVHCAAERRPDVSEQSPEQALALNLSASQTLAKAAKQHGA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG + P E + NP+N YG+SKL GE V + + + +LR +Y Sbjct: 103 WLLYISTDYVFDG-TTPPYAEDAAPNPVNFYGESKLQGETCVLNTDSRFAVLRLPILYGE 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + +L ++ + R V +PTS IA AI ++ + +D + GI Sbjct: 162 VTQLSESAVLVLINQLLDSRPQRVDAWAIRSPTSTADIAGAIAKLIKRQLHAAD--VLGI 219 Query: 211 FHMTA 215 +H ++ Sbjct: 220 YHFSS 224 >gi|116748974|ref|YP_845661.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] gi|116698038|gb|ABK17226.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 4/155 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL A F P +I+ AA T V+ ++ ++ IN E IA I Sbjct: 46 VDLTDRAQTADMFRRLKPRAVIHAAAATNVNWCQENRAESYRINVEAPFHIAALCAESAI 105 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 P ++IS+D VFDGLS P E P +P+N+YG+ K EE VA+ N VI R ++ Sbjct: 106 PYLFISSDMVFDGLS-PPYGERDPVSPVNVYGEQKARAEEMVAAEYPNAVICRLPLMFGE 164 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 F S F+ M+ + RE+ + D+ TP SA Sbjct: 165 PGPFSSGFVQPMIEAMRSGRELPLFTDEIRTPVSA 199 >gi|289451026|gb|ADC93942.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Autumnalis] gi|289451110|gb|ADC94025.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Grippotyphosa] Length = 296 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 42/302 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQD------------VEIIRVGRPDIDLLKPKDFASFFLSFSP 51 L+ G +G + LS +++ + II + +IDLL + P Sbjct: 7 LITGASGLLGHHLSRFFLENGNKVIALRKTHSLGIIGLDEIEIDLLDFNTVKNLLTKIGP 66 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D II+ A T VD E +A I+ + + IA+ A I I+ISTD+++DG + Sbjct: 67 DYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSKMIHISTDHLWDG-TMQM 125 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLSMLR 164 + E P PLN+YGK+K E V + + +ILRT W S+ S+++++ L Sbjct: 126 VTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRTNFFGPGLQWRQSL--SDWIINSL- 182 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 +I+ D F TP S +AR I+ + +GI+H T +S D Sbjct: 183 --NRNEKINAFSDVFFTPISIYHLARVILFLIQK-------KAKGIYH-TVGSERISKYD 232 Query: 225 FAEYI---FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 FA I F +S E P S + A RP L K+ N+ + T + Sbjct: 233 FAISIAKSFNKSTELIRPIS------IQNIQFNALRPLDMSLSTDKIVGFLNVSMPTVQA 286 Query: 282 GV 283 G+ Sbjct: 287 GI 288 >gi|13528837|gb|AAH05218.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 323 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNTQLDCSKL 289 >gi|317479141|ref|ZP_07938281.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316904713|gb|EFV26527.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 300 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 17/255 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PDV+IN +A + D E A ++N +A+ ++ G Sbjct: 53 DICNRQAVKKLFQEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSR 112 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VF G + P E P+N YG +KL GE+++A+ +Y I+R VY Sbjct: 113 FIHLSTDFVFGGDTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAA 172 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R E+ VV DQ+ TPT +++ + LI + GI Sbjct: 173 LPGQHGNVLQLVANRLRNNEEVFVVSDQWRTPTFVGDVSQGV----EKLISHPQN---GI 225 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLA 269 +H+ ++ AD A + A+ G + R + TK+ K RP +S L K Sbjct: 226 YHLCGSEC-LTIADIA----YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAH 280 Query: 270 NTHNIRISTWKEGVR 284 + T +EG++ Sbjct: 281 RELGYQPYTLEEGIK 295 >gi|294142523|ref|YP_003558501.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] gi|293328992|dbj|BAJ03723.1| dTDP-4-dehydrorhamnose reductase, putative [Shewanella violacea DSS12] Length = 306 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 6/191 (3%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 + G +DL + F PD+I++ AA D +E P A ++N A+A++ Sbjct: 38 QAGIYKLDLTNTQAADEFIAHHQPDIIVHCAAERRPDVSELNPSAALALNLGATKALAES 97 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 A GI IYISTDYVFDG S EF NPLN YG+SK GE+ + + + ++ +LR Sbjct: 98 ASKHGIWIIYISTDYVFDG-SAPNYAEFHKPNPLNFYGESKWQGEQALLATSKDFAVLRL 156 Query: 148 AWVY---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 +Y + +L +L +++ V +PTS IA AI ++ ++ + Sbjct: 157 PILYGQVETVSESAILILLNHLMDKQTQEVDHWAVRSPTSTQDIALAIEKMID--LQVAQ 214 Query: 205 TSLRGIFHMTA 215 L GI+H + Sbjct: 215 QELSGIYHFSG 225 >gi|33519455|ref|NP_877725.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Homo sapiens] gi|109079662|ref|XP_001089537.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 4 [Macaca mulatta] gi|114603281|ref|XP_001146485.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Pan troglodytes] gi|296192702|ref|XP_002744187.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Callithrix jacchus] gi|6006498|emb|CAB56837.1| dTDP-4-keto-6-deoxy-D-glucose 4-reductase [Homo sapiens] gi|37182512|gb|AAQ89058.1| MAT2B [Homo sapiens] gi|119581922|gb|EAW61518.1| methionine adenosyltransferase II, beta, isoform CRA_b [Homo sapiens] Length = 323 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNAQLDCSKL 289 >gi|318065111|ref|NP_001188160.1| methionine adenosyltransferase II, beta [Ictalurus punctatus] gi|308323562|gb|ADO28917.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus] Length = 322 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/301 (28%), Positives = 128/301 (42%), Gaps = 27/301 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ D E++ G RP +LL + + +F P V Sbjct: 19 RVLVTGATGLLGRAVYKEFQNNDWEVLGCGYTRARPRFLSCNLLDEEAVRAVIHNFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E E A ++N +AK A GI IYISTDYVFDG P Sbjct: 79 IVHCAAERRPDVVEHHTEAALNLNVHACATLAKEA--AGIFLIYISTDYVFDG-RNPPYG 135 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF------GSNFLLSMLRLAK 167 NPLN+YGKSKL GEE++ + ILR +Y L ++ Sbjct: 136 GNDTPNPLNMYGKSKLKGEEEILRHCPGAAILRVPILYGEVEKVEESAVTVLWDCIQEGA 195 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + +F T TS + ++ I LI+ S L GIFH + + E Sbjct: 196 ESSTVDHCQQRFPTYTSDVHVSAGIW-----LIDVSGLILHGIFHYSGKEQMTKY----E 246 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH-NIRISTWKEGVRNI 286 + P S + + + A RP + L+CS+L ++ + +K +RN Sbjct: 247 IACAIADAFNLPRSHLIPLTEQPAGAGAQRPQNAQLECSRLDLLGLSVEPTPFKTAIRNC 306 Query: 287 L 287 L Sbjct: 307 L 307 >gi|229815499|ref|ZP_04445830.1| hypothetical protein COLINT_02550 [Collinsella intestinalis DSM 13280] gi|229808936|gb|EEP44707.1| hypothetical protein COLINT_02550 [Collinsella intestinalis DSM 13280] Length = 227 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 23/212 (10%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ NA G +A+ G+ +++S+DYVFDG + P E P +PL++YG+SK AG+ Sbjct: 3 WAANAAGPALMARTCAEHGMTLVHVSSDYVFDGTVGNHP--EGEPLSPLSVYGQSKAAGD 60 Query: 133 EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-------RREISVVCDQFGTPTSA 185 VA +YV+ R++WV G NF+ +M L+ ++VV DQ G T Sbjct: 61 LAVAGCPRHYVV-RSSWVIGD-GRNFVKTMRSLSDRVADASDALERVTVVDDQLGRLTFT 118 Query: 186 LQIARAIIQI---AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 Q+A I+ + +E S + G +++T G SWA A +F + G Sbjct: 119 DQMAEGILHLLGYRDGDVEPSAPAEYGTYNLTGSGPVESWAGIAARVFDLANGNG---EA 175 Query: 243 VYRIFTKQYPTKAH-----RPAYSCLDCSKLA 269 V + T +Y A RPA+S LD SK+A Sbjct: 176 VEPVATAEYYASAEGPIAPRPAHSDLDLSKIA 207 >gi|45219849|gb|AAH66645.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 334 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|332238969|ref|XP_003268677.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Nomascus leucogenys] Length = 323 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNAQLDCSKL 289 >gi|149052294|gb|EDM04111.1| rCG33311, isoform CRA_c [Rattus norvegicus] Length = 323 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 50 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAIGAFLIYISSDYVFDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPKNAQLDCSKL 289 >gi|332238967|ref|XP_003268676.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Nomascus leucogenys] Length = 334 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|112983992|ref|NP_001037747.1| methionine adenosyltransferase 2 subunit beta [Rattus norvegicus] gi|81883481|sp|Q5U2R0|MAT2B_RAT RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|55249791|gb|AAH85899.1| Similar to methionine adenosyltransferase II, beta [Rattus norvegicus] gi|149052293|gb|EDM04110.1| rCG33311, isoform CRA_b [Rattus norvegicus] Length = 334 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 61 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAIGAFLIYISSDYVFDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVASVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPKNAQLDCSKL 300 >gi|197102462|ref|NP_001126137.1| methionine adenosyltransferase 2 subunit beta [Pongo abelii] gi|55730484|emb|CAH91964.1| hypothetical protein [Pongo abelii] Length = 323 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNAQLDCSKL 289 >gi|11034825|ref|NP_037415.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Homo sapiens] gi|109079666|ref|XP_001089658.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 5 [Macaca mulatta] gi|114603285|ref|XP_518083.2| PREDICTED: methionine adenosyltransferase II, beta isoform 5 [Pan troglodytes] gi|114603287|ref|XP_001146686.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 4 [Pan troglodytes] gi|296192700|ref|XP_002744186.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Callithrix jacchus] gi|74719662|sp|Q9NZL9|MAT2B_HUMAN RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=DTDP-4-keto-6-deoxy-D-glucose 4-reductase; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|75040945|sp|Q5R4E0|MAT2B_PONAB RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|6815285|gb|AAF28477.1| methionine adenosyltransferase regulatory beta subunit [Homo sapiens] gi|12052852|emb|CAB66599.1| hypothetical protein [Homo sapiens] gi|55733390|emb|CAH93376.1| hypothetical protein [Pongo abelii] gi|117646290|emb|CAL38612.1| hypothetical protein [synthetic construct] gi|119581921|gb|EAW61517.1| methionine adenosyltransferase II, beta, isoform CRA_a [Homo sapiens] gi|189065444|dbj|BAG35283.1| unnamed protein product [Homo sapiens] Length = 334 Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|62205265|gb|AAH93030.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 334 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREGDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 289 RPRNAQLDCSKL 300 >gi|119581924|gb|EAW61520.1| methionine adenosyltransferase II, beta, isoform CRA_d [Homo sapiens] Length = 333 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 60 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 119 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 120 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 178 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 179 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 238 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 239 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 287 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 288 RPRNAQLDCSKL 299 >gi|62901974|gb|AAY18938.1| DKFZp564B246 [synthetic construct] Length = 358 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 85 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 144 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 145 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 203 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 204 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 263 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 264 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 312 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 313 RPRNAQLDCSKL 324 >gi|158257270|dbj|BAF84608.1| unnamed protein product [Homo sapiens] Length = 323 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 110/254 (43%), Gaps = 27/254 (10%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVYSIF------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 LR +Y + ++ + + + +F PT +A Q+A Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWRQRF--PTHVKDVATVCRQLAEK 226 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTK 254 + D S++G FH W+ + +E A+ S R T Sbjct: 227 RM--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLG 275 Query: 255 AHRPAYSCLDCSKL 268 A RP + LDCSKL Sbjct: 276 AQRPRNAQLDCSKL 289 >gi|330689348|pdb|2YDX|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689349|pdb|2YDX|B Chain B, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689350|pdb|2YDX|C Chain C, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689351|pdb|2YDX|D Chain D, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689352|pdb|2YDX|E Chain E, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit Length = 315 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 111/253 (43%), Gaps = 23/253 (9%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL F P VI++ AA D E++P+ A +N + +G Sbjct: 34 FRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 93 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V Sbjct: 94 LAKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAA 152 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +LR +Y + S + ++ + ++ Q PT +A Q+A Sbjct: 153 VLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR 212 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 + D S++G FH W+ + +E A+ S R T A Sbjct: 213 M--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGA 261 Query: 256 HRPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 262 QRPRNAQLDCSKL 274 >gi|86160707|ref|YP_467492.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777218|gb|ABC84055.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-C] Length = 298 Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 28/283 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGR------------PDIDLLKPKDFASFFL 47 M+ + G NG + + ++ V E++ +GR D DL + L Sbjct: 1 MRIAITGANGLLGGAAVTLAVSGGHEVVGLGRGPCRLAPGRFAWADADLSDGRSVERTLL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+ +++ A T VD E EPE+A+ N G +A+A ++G + +STDYVFDG Sbjct: 61 ELRPEAVLHAGAMTDVDGCEREPELAWRANVGGTEQVARACRALGARLVAVSTDYVFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLR 164 +R E NP Y ++K GEE + + R A VYS + F ++ Sbjct: 120 TRGRYREDDLPNPQGAYARTKRCGEEAALVIAPDAAVARVAVVYSGRPGAKATFATQVVE 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + DQ +PT A A +++ L+E+ LRG+ H TA + D Sbjct: 180 KLSRGEPVKAFSDQVVSPTLAESAAEMTLEL---LLEH---DLRGVLH-TAGATALDRVD 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 FA + A R G ++ + T A RP S LD + Sbjct: 233 FARRV----AARFGLSGEIVPVKTADAKLLAPRPLRSGLDVGR 271 >gi|126176068|ref|YP_001052217.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125999273|gb|ABN63348.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 304 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 6/185 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P +F P VI++ AA D +E P+ A ++N + A+A AA + Sbjct: 43 LDLTAPLAVEAFIAREQPQVIVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ E + T+P+N YG+SKL GEE V + + ++ +LR +Y Sbjct: 103 WLIYISTDYVFDG-TQPKYAEDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQ 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ E R V +PTS IA+AI ++ IE + GI Sbjct: 162 VEKLSESAVLVLVNQLIESRAQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAP--IVLGI 219 Query: 211 FHMTA 215 +H +A Sbjct: 220 YHFSA 224 >gi|295084034|emb|CBK65557.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 310 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 132/318 (41%), Gaps = 48/318 (15%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS V + PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHAQYKVTGCSL-HPDISPNDVGKYRFIETDIRNEADIKC 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N +A + I++STD+VF Sbjct: 62 LFEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVF 121 Query: 105 DG---LSRTPIDE-----FSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 DG + I+E ++ + P+N YG +K GEEKVA ++Y I+R A VY Sbjct: 122 DGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVAIVYGR 181 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSL 207 G+ L M RL K +EI VV DQ+ TPT ++ + + IAH Sbjct: 182 ALPGQHGNIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH--------PT 232 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 GIFH+ V AE + + G +S ++ + T++ RP +S + K Sbjct: 233 NGIFHICG----VECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTPRPRFSGMSIDK 288 Query: 268 LANTHNIRISTWKEGVRN 285 KE + N Sbjct: 289 ARTMLGYEPQKLKEALAN 306 >gi|113971860|ref|YP_735653.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] gi|113886544|gb|ABI40596.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] Length = 306 Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 14/240 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + +F P+VI++ AA D +E PE A ++N + +A+AA + Sbjct: 43 LDLTQAAEVEAFIAREQPEVIVHCAAERRPDVSERSPEHALALNLSASQTLAEAAKNHQA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG + P E + NP+N YG SKL GE V + + +LR +Y Sbjct: 103 WLLYISTDYVFDG-TTPPYAEDAEPNPVNFYGASKLQGETCVLNTDRGFAVLRLPILYGE 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + + +L ++ + R V PTS IA AI ++ + +D S GI Sbjct: 162 VTQLSESAVLVLINQLLDSRPQRVDHWAIRAPTSTADIANAIAKLIQRQSDGADVS--GI 219 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLA 269 +H +A +Y + + +Q P A RP L C +LA Sbjct: 220 YHFSA------MQTMTKYQMLLGLGELLGVDSAH-LLPEQTPMDSAKRPQDCTLSCGRLA 272 >gi|257077379|ref|ZP_05571740.1| dTDP-4-dehydrorhamnose reductase [Ferroplasma acidarmanus fer1] Length = 275 Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 16/226 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+IG+ GQ+ ++LSS+ + + IDL + + +S D +IN AA Sbjct: 1 MKTLIIGSGGQLGKALSSILENSIPL---SHDVIDLRNVNNIENTLDKYSFDTVINCAAM 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN I I++STDYVF+G ++ E + P Sbjct: 58 TSVDKCEIEIDSAYYINGLSMKYIGDYCRENNKYLIHVSTDYVFNG-NKGNYTEDDISYP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL G+ SY N+ +I+RT+ VY +NF L ++ + I+ D + Sbjct: 117 INYYGLSKLIGDTYANSYQNS-LIIRTSGVYGA-KNNFPLYVIDRLRNNSGINAF-DNYY 173 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 +P +A +A +I ++ D L GI +++ G +S +FA Sbjct: 174 SPVNANVLAHSISKLL-------DLKLTGILNVS--GPRLSRYEFA 210 >gi|83644554|ref|YP_432989.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] gi|83632597|gb|ABC28564.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] Length = 305 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 3/231 (1%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 S D +++ A + + KAE P++A+ +N A+A+ AD P +++S+ VFDG+ + Sbjct: 51 SADFVVHAAEMSDLFKAEQHPDLAYQVNVSACAAVAEVADLWKAPIVHLSSHLVFDGVKK 110 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P + PL++YG++KL E+ + + ++ILR W+ +L +ML Sbjct: 111 NPYISANKGRPLSVYGRTKLQSEQWLQENYSKHLILRVGWLLEAGAQGWLQTMLSALSSG 170 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ D TP + +AR + + L + + S+ G++H + + Sbjct: 171 KRLNASTDMQLTPVAVDDVARVVDAVIKQL--SCNISVWGVYHYAGAEAVTHYELLKAIV 228 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + + + + P A PA L C KL NT ++ W+ Sbjct: 229 LQAFGQEEMLQALIEKKGADVLPGVA-LPANGALGCIKLRNTFGVKQLPWR 278 >gi|298481164|ref|ZP_06999358.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] gi|298272738|gb|EFI14305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] Length = 310 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 91/318 (28%), Positives = 133/318 (41%), Gaps = 48/318 (15%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS V + PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHAQYKVTGCSL-HPDISPNDVGKYRFIETDIRNEADIKC 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N +A + I++STD+VF Sbjct: 62 LFEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVF 121 Query: 105 DG---LSRTPIDE-----FSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 DG + I+E ++ + P+N YG +K GEEKVA ++Y I+R A VY Sbjct: 122 DGKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVAIVYGR 181 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSL 207 G+ L M RL K +EI VV DQ+ TPT ++ + + IAH Sbjct: 182 ALPGQHGNIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH--------PT 232 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 GIFH+ V AE + + G +S ++ + T++ RP +S + K Sbjct: 233 NGIFHICG----VECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTPRPRFSGMSIDK 288 Query: 268 LANTHNIRISTWKEGVRN 285 + KE + N Sbjct: 289 ARTMLGYKPQKLKEVLAN 306 >gi|284996982|ref|YP_003418749.1| hypothetical protein LD85_0643 [Sulfolobus islandicus L.D.8.5] gi|284444877|gb|ADB86379.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 314 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 33/298 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPDI-DLLKPKDFASFFLSFS 50 M+ ++IG +GQ+ LS + + E+I+ R D+ D L +DF Sbjct: 40 MRIMIIGASGQLGLELSRK-LSNYELIKTFALHELSEGLRLDLTDYLSLEDFII---KKK 95 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P++IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG ++ Sbjct: 96 PEIIINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDG-NKG 154 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E NP+N YG +KL GE +SY + +I+RT+ V+ F + + + KE + Sbjct: 155 LYKEDDLPNPINYYGLTKLLGENYASSYDDT-LIVRTSGVFR--NKGFPVYVYKNLKEGK 211 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ + F +P SA ++A AI + L+ T GI ++ G +S D A+ I Sbjct: 212 EV-LAFKGFYSPISATKLAEAI----NELVTYKKT---GIINIA--GERISRYDLAQKI- 260 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G +V RI A RP S LD K +I + E ++++++ Sbjct: 261 KELYNLSGKVIEVDRI----EGWIAKRPFDSSLDILKAKKLVSIDFYSTDENLKHMVI 314 >gi|329963485|ref|ZP_08301014.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] gi|328528656|gb|EGF55620.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] Length = 317 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 15/254 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ F + PDV++N +A + D E E A +IN +A+ Sbjct: 70 DICDNNALEKLFEAVRPDVVVNTSALSVPDYCETHHEEADAINITAVSRLAEYCRMHDSR 129 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VF G + E P+N YG +KL GE+++ + NY I+R VY Sbjct: 130 FIHLSTDFVFSGNTDRLYTEEDTPGPVNYYGHTKLEGEKRITAICENYAIVRVVVVYGAA 189 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L +R EI VV DQ+ TPT I++ + ++ + GI Sbjct: 190 LPGQHGNILQLVADRLRNNEEIFVVSDQWRTPTYVGDISQGVEKLI-------NRPRNGI 242 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +H+ ++ AD A + + G S + + TK+ K RP +S L K Sbjct: 243 YHICG-SDCLTIADMARRV---ADLLGLDRSLIRPVTTKEMNEKTPRPRFSGLSIEKACR 298 Query: 271 THNIRISTWKEGVR 284 + T +EG++ Sbjct: 299 ELGYQPHTLEEGMK 312 >gi|329665893|pdb|2YDY|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit In Orthorhombic Crystal Form Length = 315 Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/253 (29%), Positives = 109/253 (43%), Gaps = 23/253 (9%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL F P VI++ AA D E++P+ A +N + +G Sbjct: 34 FRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 93 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V Sbjct: 94 LAKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAA 152 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +LR +Y + S + ++ + + Q PT +A Q+A Sbjct: 153 VLRIPILYGEVEKLEESAVTVXFDKVQFSNKSANXDHWQQRFPTHVKDVATVCRQLAEK- 211 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKA 255 D S++G FH W+ + +E A+ S R T A Sbjct: 212 -RXLDPSIKGTFH---------WSGNEQXTKYEXACAIADAFNLPSSHLRPITDSPVLGA 261 Query: 256 HRPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 262 QRPRNAQLDCSKL 274 >gi|218244985|ref|YP_002370356.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] gi|218165463|gb|ACK64200.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] Length = 294 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKPK-----DFASFFLSFS 50 K L+ G +G + L Q E+ ++ P++DLLK D + Sbjct: 3 KLLITGASGFLGWHLCQKAQQSWEVYGTYFNHKITIPNVDLLKIDLTNFLDIKTCINQLK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD II+ AA + + + P+ + IN E + IA + IPCI+ STD VFDGL+ Sbjct: 63 PDGIIHLAAASKPNYCQIYPQESAKINIEASVNIANLCSDLEIPCIFTSTDLVFDGLN-A 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P +P++ YG+ K+ E+++ + V+ R ++ + ++F+ + K Sbjct: 122 PYKETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGLASPTSASFIDFFINTLK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAII 193 E +E+S+ D+F TP S+ A ++ Sbjct: 182 EGKELSLFIDEFRTPVSSSTAADGLL 207 >gi|227829947|ref|YP_002831726.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|227456394|gb|ACP35081.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] Length = 275 Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 148/298 (49%), Gaps = 33/298 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPDI-DLLKPKDFASFFLSFS 50 M+ ++IG +GQ+ LS + + E+I+ R D+ D L +DF Sbjct: 1 MRIMIIGASGQLGLELSRK-LSNYELIKTFALHELSEGLRLDLTDYLSLEDFII---KKK 56 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P++IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG ++ Sbjct: 57 PEIIINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDG-NKG 115 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E NP+N YG +KL GE +SY ++ +I+RT+ V+ G F + + + KE + Sbjct: 116 LYKEDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVFRNKG--FPVYVYKNLKEGK 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ + F +P SA ++A AI + L+ T GI ++ G +S D A+ I Sbjct: 173 EV-LAFKGFYSPISATKLAEAI----NELVTYKKT---GIINIA--GERISRYDLAQKI- 221 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E G +V RI A RP S LD K +I + E ++++++ Sbjct: 222 KELYNLSGKVIEVDRI----EGWIAKRPFDSSLDILKAKKLVSIDFYSTDENLKHMVI 275 >gi|289808300|ref|ZP_06538929.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 78 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 43/78 (55%), Positives = 54/78 (69%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I+N AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P Sbjct: 1 MIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPW 60 Query: 113 DEFSPTNPLNIYGKSKLA 130 E T+PLN+YGK+KL Sbjct: 61 QETDATSPLNVYGKTKLG 78 >gi|127514272|ref|YP_001095469.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126639567|gb|ABO25210.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 307 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 20/229 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII-----RVGRPD--IDLLKPKDFASFFLSFSPD 52 +K ++ G G + ++L ++ V ++ R G+ +DL F + P+ Sbjct: 2 LKIMITGATGLLGRALVEQFAKEPVTLLTCGYSRAGKDTHRLDLTDEGAVKQFIETHKPE 61 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI++ AA D +E +PE A ++N +A+AA + G YISTDYVFDG S Sbjct: 62 VILHCAAERRPDVSERDPEAAKALNLAATRQLAQAAKANGAWLCYISTDYVFDGTS-PDY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAKE 168 E T PLN YG++K GE+ + + + +LR +Y S+ S L+ + +L Sbjct: 121 GEEDQTYPLNFYGETKREGEQALIEVSREFAVLRLPILYGRVESLDESAVLVMLKQLVN- 179 Query: 169 RREISVVCDQFG--TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 ++ D + +PTS L IA A++++ + D + GI+H T Sbjct: 180 --QVPTQQDDWAVRSPTSTLDIANALVKLVARQQQAGDVA--GIYHFTG 224 >gi|226358054|ref|YP_002787793.1| bifunctional protein: glycosyl hydrolase family 1; dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] gi|226319697|gb|ACO47691.1| putative bifunctional protein: glycosyl hydrolase family 1; dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] Length = 728 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 15/270 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-DIDLLKPKDFASFFLSFSPDVIINPAA 59 ++ L+I G++ Q ++ +C R+ P DID+ + F + P +IN Sbjct: 447 VRPLLILGTGRLGQVVARLCHDRGLDHRLLSPADIDITNQPALEALFEAERPWAVINTLG 506 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y +D+AE E + + ++ GA +A+ + G+ + S+D VF G P E + Sbjct: 507 YGKIDQAELEHQEFWLTHSVGAALLAQVCERRGVQLLTFSSDQVFGGDGEAPYHELDVAS 566 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N+YG++KL E +V + +I+R++ V+ S G L LR + + V D Sbjct: 567 PVNVYGRAKLESERQVLANHPTALIVRSSAVFGSGTGRGLLSEALRTLQTGETVLVDQDH 626 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT + + + LI+ G++H+ + G +WA+ + A GG Sbjct: 627 RFSPTYLPDLVHTSLDL---LIDGES----GVWHLV-NTGESTWAEMVGRL----AHAGG 674 Query: 239 -PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 P ++ ++ A RP YS L + Sbjct: 675 LPDHRIRAASARELGWVAPRPRYSALRSDR 704 >gi|218258294|ref|ZP_03474696.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii DSM 18315] gi|218225637|gb|EEC98287.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii DSM 18315] Length = 295 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 88/303 (29%), Positives = 128/303 (42%), Gaps = 29/303 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDIDLLKPKDFAS-----------FFL 47 K LVIG NG + + + E VG PDI + F F Sbjct: 3 KILVIGANGFAGRRILDKLSSNGECEVVGCSLHPDIQPGEKHTFVRVDMNDYPAVEVLFD 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN +A + D E E A++IN +A + G I++STD+VFDG Sbjct: 63 HVCPDVVINCSALSVPDYCEQHREEAYAINVAAVENLAHCCEQQGSRFIHLSTDFVFDGK 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 S E PLN YG +K GE+ VA NY + R VY ++L+L K Sbjct: 123 SDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYGKALPGQHGNILQLVK 182 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 R +EI VV DQ+ TPT IA + ++ + + GI+H+ GG + Sbjct: 183 NRLEAGQEIRVVSDQYRTPTWVADIADGVEKLVY-------SGNSGIYHIC--GG--EYL 231 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE + + +S + + T++ RP S L K R T +EG+ Sbjct: 232 SIAEMAYRVADYFKLDHSLICPVTTEEMKEATPRPRNSGLSIDKAKLELGYRPHTLEEGL 291 Query: 284 RNI 286 R + Sbjct: 292 REM 294 >gi|332709592|ref|ZP_08429552.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] gi|332351625|gb|EGJ31205.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] Length = 292 Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 15/206 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-----------VQDVEIIRVGRPDIDLLKPKDFASFFLSFS 50 K LV G +G + +L + Q ++I + DL + ++ F Sbjct: 4 KLLVTGASGFLGWNLCQLAKEQWDIYGTYFSQTIDIPGITLVKADLREFQEIKHLFAEIQ 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +I+ AA + + + E ++SIN + IA+ + IPC++ STD VFDGL+ Sbjct: 64 PAGVIHTAAQSKPNFCQTHREESYSINVTASINIARLSADYDIPCVFTSTDLVFDGLN-P 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLRLAK 167 P E P +P++ YG+ K+ EE + S+ I R ++ I S+F+ L++ + Sbjct: 123 PYLETDPVSPISYYGEQKVMAEEGMRSHYPKVAICRMPLMFGIVPPTASSFIQPFLKIIR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAII 193 E R +S+ D+ TP S A+ ++ Sbjct: 183 EGRPLSLFTDEIRTPVSGTTAAKGLL 208 >gi|257058009|ref|YP_003135897.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] gi|256588175|gb|ACU99061.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] Length = 294 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKPK-----DFASFFLSFS 50 K L+ G +G + L Q E+ + P++DLLK D + Sbjct: 3 KLLITGASGFLGWHLCQKAQQSWEVYGTYFNHNITIPNVDLLKIDLTNFLDIKTCINQLK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD II+ AA + + + P+ + IN E + IA + IPCI+ STD VFDGL+ Sbjct: 63 PDGIIHLAAASKPNYCQIYPQESAKINIEASINIANLCSDLEIPCIFTSTDLVFDGLN-P 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSNFLLSMLRLAK 167 P E P +P++ YG+ K+ E+++ + V+ R ++ S ++F+ ++ K Sbjct: 122 PYQETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGPASPTSASFIDFFIKTLK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAII 193 E +E+S+ D+F TP S+ A ++ Sbjct: 182 EGKELSLFIDEFRTPVSSSTAADGLL 207 >gi|327260693|ref|XP_003215168.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Anolis carolinensis] Length = 334 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 42/254 (16%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL + F P VII+ AA D + +P+ A +N +G IAK A + Sbjct: 70 VNLLDATAVHNLIQGFQPHVIIHCAAERRPDVVDSQPDAASRLNVVASGNIAKEAAQVRA 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +YISTDYVFDG + P E NPLN+YG++KL GE+ V + +LR +Y Sbjct: 130 FLVYISTDYVFDG-TDPPYKENDVPNPLNLYGRTKLEGEKAVLQNNKDAAVLRIPILYG- 187 Query: 154 FGSNFLLSMLRLAKERREISVVCD--QFGT------------PTSALQIARAIIQIAHNL 199 + RL + ++V+ D QF PT +A Q+A Sbjct: 188 -------EVERL--DESAVTVIFDKVQFNNKSANMDHWQQRFPTYVKDVASVCRQLAEKR 238 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYPTK 254 ++N S++G FH W+ + +E A P S + R T Sbjct: 239 MQNP--SIKGTFH---------WSGNEQLTKFEMARAMADAFNLPSSHL-RPITDGPVVG 286 Query: 255 AHRPAYSCLDCSKL 268 A RP + LDCS+L Sbjct: 287 ALRPKNAQLDCSRL 300 >gi|15897732|ref|NP_342337.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus P2] gi|6015645|emb|CAB57472.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2] gi|13814013|gb|AAK41127.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus P2] Length = 226 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 5/151 (3%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + PDVIIN AA T VDK E E E A+ INAE + +A+ + I++STDYVF Sbjct: 4 FIIKTRPDVIINTAAMTDVDKCEVEREKAYKINAEAVKHMVRASRVVEAYFIHVSTDYVF 63 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG ++ P NP+N YG +KL GE SY ++ VI RT+ V+ G F + + + Sbjct: 64 DGTKGNYKEDDLP-NPINYYGLTKLLGETFALSYDDSLVI-RTSGVFRHKG--FPVYVYK 119 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQI 195 KE + + + +P SA ++A AI ++ Sbjct: 120 TLKEGKTV-FAYKGYYSPISARKLASAIEEL 149 >gi|73954080|ref|XP_536439.2| PREDICTED: similar to methionine adenosyltransferase II, beta isoform 1 [Canis familiaris] Length = 604 Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 27/255 (10%) Query: 27 IRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 R RP ++LL + F P VI++ AA D E++P+ A +N + +G Sbjct: 330 FRRARPKFEQVNLLDSEAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 389 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AK A IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V Sbjct: 390 LAKEAALIGAFLIYISSDYVFDG-TNPPYREEDVPSPLNLYGKTKLEGEKAVLENNLGAA 448 Query: 144 ILRTAWVYSIFGS------NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 +LR +Y + ++ + + + +F PT +A Q+A Sbjct: 449 VLRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRF--PTHVKDVATVCRQLAE 506 Query: 198 NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPT 253 + D S++G FH W+ + +E A+ S R T Sbjct: 507 KRM--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVL 555 Query: 254 KAHRPAYSCLDCSKL 268 A RP + LDC+KL Sbjct: 556 GAQRPRNAQLDCTKL 570 >gi|40714032|dbj|BAD06938.1| methionine adenosyltransferase II beta subunit [Mus musculus] Length = 334 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 27/273 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 61 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAEGRPDVVESQPDAASQLNVGASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYV DG + P E +PLN+YGK+KL GE+ + Sbjct: 121 AKEAAAIGAFLIYISSDYVLDG-TNPPYTEEDIPSPLNLYGKTKLDGEKAALENNLGAAV 179 Query: 145 LRTAWVYSIF------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 LR +Y + ++ + + + +F PT +A Q+A Sbjct: 180 LRIPVLYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRF--PTHVKDVASVCRQLAEK 237 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTK 254 + D S++G FH W+ + +E A+ S R T Sbjct: 238 RM--LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVIG 286 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A RP + LDCSKL + + ++ G++ L Sbjct: 287 AQRPKNAQLDCSKLETLGIGQRTPFRTGIKESL 319 >gi|298385499|ref|ZP_06995057.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] gi|298261640|gb|EFI04506.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] Length = 302 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 104/239 (43%), Gaps = 35/239 (14%) Query: 4 LVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFASFF 46 ++IG NG QI LSS V + PDI D+ F Sbjct: 5 MIIGANGFTGRQILNDLSSKAQYKVTGCSL-HPDILPRNGGNYHFITTDIRDEAAVKQLF 63 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+IN +A + D E E A+ N +A +S I++STD+VFDG Sbjct: 64 KEVQPDVVINCSALSVPDYCETHHEEAWLTNVTAVEQLAHLCESYKSRFIHLSTDFVFDG 123 Query: 107 ----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSN 157 S E S P+N YG +K GEEKVA +NY I R VY G+ Sbjct: 124 KIDEKSGQLYTEESLPAPVNYYGFTKWKGEEKVAEICSNYAIARVEIVYGKALPGQHGNI 183 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L M RL +EI VV DQ+ TPT ++ + +L+EN + GIFH+ + Sbjct: 184 VQLVMNRL-NAGQEIRVVSDQWRTPTYVGDVSAGV----QHLVEN---AANGIFHICGE 234 >gi|321479218|gb|EFX90174.1| hypothetical protein DAPPUDRAFT_299978 [Daphnia pulex] Length = 269 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 7/183 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ +F P+ I++ AA DK + + + +N E +A A +G Sbjct: 45 IDICNHAKTEELIRNFMPNCIVHCAAQRFPDKVDKDLDGTIRLNVEATKNLAVLAAKLGA 104 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 IYISTDYVFDG ++ P E NPLN YGK+KL GE+ + ++++LR +Y Sbjct: 105 TMIYISTDYVFDG-TKPPYSETDTPNPLNTYGKTKLQGEQVTLESSQDHIVLRVPVLYGP 163 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 G + + +L+L + +V D + P+ IA +++ ++ ++ ++G Sbjct: 164 VEYIGESAVTVLLQLLFDSESNKLVSDSEIRYPSHVDDIAFICVKLLE--LKQTNADVKG 221 Query: 210 IFH 212 IFH Sbjct: 222 IFH 224 >gi|124007540|ref|ZP_01692245.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134] gi|123987023|gb|EAY26779.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134] Length = 311 Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 17/190 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ ++ + F PD +I+ AA T VD E + ++ + +N + +A + Sbjct: 54 MDITNREEVIATLTEFKPDAVIHTAAMTQVDDCETQRDLCWQLNVNSVEYLIEACQQLKQ 113 Query: 94 P-----CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++STD++FDG + P E + NP++ YG+SKLA E+ + + + I RT Sbjct: 114 AGKAPFLVHLSTDFIFDG-AAGPYHEEATANPVSYYGESKLAAEQALLASNIQWSIARTV 172 Query: 149 WVYSIFG----SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 VY I SN +L + + +E + I VV DQ+ TPT A +A +A D Sbjct: 173 LVYGITEAMSRSNIILWVKKSLEEGKTIHVVNDQWRTPTLAEDLAMGCFLMA-------D 225 Query: 205 TSLRGIFHMT 214 + GIF+++ Sbjct: 226 KKISGIFNIS 235 >gi|294646105|ref|ZP_06723768.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294808300|ref|ZP_06767058.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|292638549|gb|EFF56904.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294444519|gb|EFG13228.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 310 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 48/300 (16%) Query: 2 KCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFAS 44 K L+IG NG QI LS V + PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHTQYKVTGCSL-HPDILPNDAGKYRFIETDIRNEADIKR 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PDV+IN +A + D E E A+ N +A + I++STD+VF Sbjct: 62 LFEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVF 121 Query: 105 DG---LSRTPIDE-----FSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 DG + I+E ++ + P+N YG +K GEEKVA +++ I+R A VY Sbjct: 122 DGKMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSSFAIIRVAIVYGR 181 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSL 207 G+ L M RL K +EI VV DQ+ TPT ++ + + IAH Sbjct: 182 ALPGQHGNIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH--------PT 232 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 GIFH+ D AE + + G S ++ + T++ RP +S + K Sbjct: 233 NGIFHICGD----ECMSIAEIAYQVADYMGLDRSLIHPVTTEEMNETTPRPRFSGMSIDK 288 >gi|117645018|emb|CAL37975.1| hypothetical protein [synthetic construct] gi|261859642|dbj|BAI46343.1| methionine adenosyltransferase II, beta [synthetic construct] Length = 334 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 180 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 240 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQ 288 Query: 257 RPAYSCLDCSKL 268 P + LDCSKL Sbjct: 289 CPRNAQLDCSKL 300 >gi|264680363|ref|YP_003280273.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262210879|gb|ACY34977.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 124 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDIGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG + Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGFRQ 118 >gi|182418039|ref|ZP_02949344.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium butyricum 5521] gi|237665702|ref|ZP_04525690.1| dTDP-4-dehydrorhamnose reductase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378094|gb|EDT75630.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium butyricum 5521] gi|237658649|gb|EEP56201.1| dTDP-4-dehydrorhamnose reductase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 288 Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G G A + +II + + ++++ K+ S +P I++ AA Sbjct: 3 KILITGGKGFFASRFNEYYKDKYDIISLSKEELNITHEKEVISKIKEVNPKFIVHTAAIA 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 E PE +F IN G+ IAKA+D + I+IS++ V++G L P +E + P Sbjct: 63 YTQVCEKNPEYSFEINVTGSKNIAKASDLVKAKLIHISSEQVYNGNLEEGPYNEDTIPIP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 +YGK KL E++V+ T N ILR W++ Sbjct: 123 DTVYGKQKLLAEQEVSKITENVWILRFNWLF 153 >gi|296192704|ref|XP_002744188.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 3 [Callithrix jacchus] gi|297295657|ref|XP_001089306.2| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca mulatta] Length = 307 Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 106/249 (42%), Gaps = 33/249 (13%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK-QYPTKAHRPA 259 D S++G FH W E+ Y I P+ RP Sbjct: 229 --LDPSIKGTFH------------------WSGNEQMTKYEMACAIADAFNLPSSHLRP- 267 Query: 260 YSCLDCSKL 268 LDCSKL Sbjct: 268 ---LDCSKL 273 >gi|291242991|ref|XP_002741389.1| PREDICTED: methionine adenosyltransferase II, beta-like [Saccoglossus kowalevskii] Length = 298 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 7/187 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + F P V+++ AA D E + E+ +N + IA+ G Sbjct: 43 VDITDEEQVRNVMKEFKPSVVVHSAAERRPDIVEKQEEVTKKLNVDTTAMIARLCGEFGA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG P + NPLN YG+SKL GE+ + ILR +Y Sbjct: 103 FMLYISTDYVFDG-KNAPYQVDAQPNPLNKYGRSKLDGEKATSDNLTESAILRIPILYGE 161 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + + + + ++ + + +CD Q PT IA I ++A ++ D S++G Sbjct: 162 VEKLSESAVTILFQAVQDTNKPATMCDYQKRYPTHVNDIAVIIRKLAEKRLQ--DPSIKG 219 Query: 210 IFHMTAD 216 IFH +++ Sbjct: 220 IFHYSSN 226 >gi|320332925|ref|YP_004169636.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] gi|319754214|gb|ADV65971.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] Length = 721 Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 14/256 (5%) Query: 15 SLSSMCVQDVEIIRVGRP-DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 ++ +C + R+ R D+DL P ++N A Y +D+AE E Sbjct: 457 TVQRLCAERGLSARLLRSSDVDLADASAVQHLLTDLRPWAVVNAAGYGGIDEAEVHHEAF 516 Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + A G +A+A ++ G+ + S+D VF G +P E +P+N YG+++ E Sbjct: 517 WRHTAVGLAVLARACEANGVHLLTFSSDQVFGGDRTSPYQEHDAAHPVNRYGRARREAEW 576 Query: 134 KVASYTNNYVILR-TAWVYSIFGSNFLLSM-LRLAKERREISVVCDQFGTPTSALQIARA 191 +V +Y +++R +A ++ G LL M LR + + + +PT + Sbjct: 577 QVLAYHPGTLVVRSSAALFGASGRQDLLGMALRTLRAGGTLFMDDQHRFSPTYLPDLVHT 636 Query: 192 IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY 251 + + LI+ RG +H+T + G SWAD + + G P V + T+Q Sbjct: 637 SLDL---LIDGE----RGTWHLT-NAGETSWADLTRML---ADATGAPADAVQAVPTEQL 685 Query: 252 PTKAHRPAYSCLDCSK 267 A RP YS + + Sbjct: 686 GWVAPRPRYSAMSSGR 701 >gi|72012984|ref|XP_783113.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] gi|115960529|ref|XP_001183196.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] Length = 300 Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 23/229 (10%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSF 49 MK LV G +G + ++L + C DV + R +D+ + F Sbjct: 1 MKVLVTGASGLMGRALMREFERTPSC--DVLGLAFSRAKGSLRKVDIRDEGEVRKVMQEF 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD I++ A D E + E A +N IAK + +G IYISTDYVFDG ++ Sbjct: 59 QPDAIVHAAVQRRPDVVEKDEEAAKKVNCSATETIAKISAEMGTFLIYISTDYVFDG-TK 117 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSML 163 P TNPLN YG+ KL GE+ ++ N ILR +Y + LL+ L Sbjct: 118 PPYKPTDATNPLNKYGQQKLEGEKISQAHAPNCAILRVPVLYGQIETVEESAVTVLLNTL 177 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 ++ I C + PTS IA Q+ + T + G+FH Sbjct: 178 VNREKTDMIDDCCTR--CPTSVDDIAVVCRQMCERWKTDPKT-MSGVFH 223 >gi|332238971|ref|XP_003268678.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 3 [Nomascus leucogenys] Length = 306 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 10/196 (5%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTAD 216 D S++G FH + + Sbjct: 229 --LDPSIKGTFHWSGN 242 >gi|220919525|ref|YP_002494829.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957379|gb|ACL67763.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-1] Length = 298 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 15/244 (6%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 +G D DL + S L+F + +++ A T VD E EPE A+ N G +A+A Sbjct: 42 LGWADADLADGRSVESALLAFRAEAVLHAGAMTDVDGCEREPEAAWRANVGGTEQVARAC 101 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 ++G + +STDYVFDG +R E NP Y ++K GEE + + R A Sbjct: 102 RALGARLVAVSTDYVFDG-TRGGYGEDDLPNPRGAYARTKRCGEEAALVIAPDAAVARVA 160 Query: 149 WVYSIFGS---NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 VYS F ++ + DQ +PT A A +++ L+E+ Sbjct: 161 VVYSGRRGAKPTFATQVVEKLSRGEAVKAFSDQVVSPTLAESAAEMTLEL---LLEH--- 214 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 RG+ H TA + DFA + A R G ++ + T A RP S LD Sbjct: 215 GYRGVLH-TAGATALDRVDFARRV----AARFGLSGEIVPVKTADVKLLAPRPLRSGLDV 269 Query: 266 SKLA 269 S+ A Sbjct: 270 SRAA 273 >gi|114603283|ref|XP_001146256.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Pan troglodytes] gi|90102185|gb|ABD85290.1| methionine adenosyltransferase II beta variant 2 [Homo sapiens] Length = 306 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 10/196 (5%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 50 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTAD 216 D S++G FH + + Sbjct: 229 --LDPSIKGTFHWSGN 242 >gi|237714640|ref|ZP_04545121.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262406505|ref|ZP_06083054.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|229445409|gb|EEO51200.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262355208|gb|EEZ04299.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] Length = 306 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 30/252 (11%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + D+ D F PDV+IN +A + D E E A+ N +A + Sbjct: 46 ETDIRNEADIKRLFEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYK 105 Query: 93 IPCIYISTDYVFDG---LSRTPIDE-----FSPTN---PLNIYGKSKLAGEEKVASYTNN 141 I++STD+VFDG + I+E ++ + P+N YG +K GEEKVA ++ Sbjct: 106 SRFIHLSTDFVFDGKMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSS 165 Query: 142 YVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ-I 195 + I+R A VY G+ L M RL K +EI VV DQ+ TPT ++ + + I Sbjct: 166 FAIIRVAIVYGRALPGQHGNIVQLVMNRL-KAGQEIRVVSDQWRTPTYVGDVSDGVQRLI 224 Query: 196 AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 AH GIFH+ D AE + + G S ++ + T++ Sbjct: 225 AH--------PTNGIFHICGD----ECMSIAEIAYQVADYMGLDRSLIHPVTTEEMNETT 272 Query: 256 HRPAYSCLDCSK 267 RP +S + K Sbjct: 273 PRPRFSGMSIDK 284 >gi|325967694|ref|YP_004243886.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28] gi|323706897|gb|ADY00384.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28] Length = 295 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 71/248 (28%), Positives = 110/248 (44%), Gaps = 34/248 (13%) Query: 32 PDIDLLKP---KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 P I ++K +D + PDV+I+ AA VD+ E++ E+ + +N + + AA Sbjct: 38 PGITMVKADLTRDSVRVINDYKPDVVIHMAAIGNVDQCEEQLELCYRVNVAASRELLTAA 97 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +G Y+STDYVFDG R E P+N YG +KL EE + + I+R A Sbjct: 98 YRVGAAIYYLSTDYVFDG-ERGMYSEDDAPRPVNYYGLTKLLAEEITRALGGS--IVRVA 154 Query: 149 WVYSI------FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 W+Y FG + ++R ++ + DQ+ +PT I A ++ Sbjct: 155 WIYGTGPGRPNFGKTVVEKLMR----GEVVTAITDQWSSPTLNTIIGEAFAKLL------ 204 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYI---FWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 D G+ H+ G +S +FA I F S E P R+ Y +A RP Sbjct: 205 -DIKFNGVIHVV--GPRLSRYEFARAIARYFGFSEELIKP----IRLIDVNY--RARRPR 255 Query: 260 YSCLDCSK 267 S L+ K Sbjct: 256 DSSLNNRK 263 >gi|291567036|dbj|BAI89308.1| putative methionine adenosyltransferase [Arthrospira platensis NIES-39] Length = 293 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL D + PD +I+ AA + + ++ P+I+ IN AG +A + GIP Sbjct: 48 DLTVLGDLKEVWEEIKPDAVIHAAAASKPNFCQENPDISHKINVVAAGDMASLCGAAGIP 107 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI- 153 ++ STD VFDGL+ P E P+NIYG+ K+ E ++ + I R +Y I Sbjct: 108 YVFTSTDLVFDGLN-PPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYGIA 166 Query: 154 --FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 G +F+ ++ K +++ D+F TP S A+ L+ + + GI Sbjct: 167 SPHGGSFMQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKG-------LLLAIEKKVNGIL 219 Query: 212 HM 213 H+ Sbjct: 220 HL 221 >gi|284050213|ref|ZP_06380423.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Arthrospira platensis str. Paraca] Length = 293 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL D + PD +I+ AA + + ++ P+I+ IN AG +A + GIP Sbjct: 48 DLTVLGDLKEVWEEIKPDAVIHAAAASKPNFCQENPDISHKINVVAAGDMASLCGAAGIP 107 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI- 153 ++ STD VFDGL+ P E P+NIYG+ K+ E ++ + I R +Y I Sbjct: 108 YVFTSTDLVFDGLN-PPYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYGIA 166 Query: 154 --FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 G +F+ ++ K +++ D+F TP S A+ L+ + + GI Sbjct: 167 SPHGGSFMQGFIKTLKSGNFLNLFEDEFRTPVSGTTAAKG-------LLLAIEKKVNGIL 219 Query: 212 HM 213 H+ Sbjct: 220 HL 221 >gi|296242300|ref|YP_003649787.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM 11486] gi|296094884|gb|ADG90835.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM 11486] Length = 306 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/283 (30%), Positives = 126/283 (44%), Gaps = 30/283 (10%) Query: 1 MKCLVIGNNGQ----IAQSLSSMCVQDVEIIRVGRP--------DIDLLKPKDFASFFLS 48 M+ LV G G IA++ SS + P ++L P+ S Sbjct: 9 MRVLVTGGTGLLGYWIAETYSSKGFKVYATYNEKNPPGLEAAWIKLNLEDPESIISVVRE 68 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD+I++ AAYT VD E E A+ +N G A+A+A IY+STDYVF+G Sbjct: 69 VRPDIIVHSAAYTDVDGCEVNKEKAYRVNYLGTEALARAGRETDY-FIYVSTDYVFNGEK 127 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGS---NFLLSMLR 164 +E +P P+N YG SKL GE V A N VI+R + +Y + NF + +L Sbjct: 128 GLYREEDTPA-PVNYYGLSKLLGEVAVRAILPKNSVIVRVSGLYGYSPTGKKNFGVIVLE 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + DQ+ +PT R + +I L+ DT G+ H+ G +S + Sbjct: 187 RLLRGENVEAFIDQWLSPT----YTRFLSEILAKLV---DTKPTGVLHIA--GERLSRYE 237 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 FA +F E G K + + P A RP S L+ +K Sbjct: 238 FAR-LFAEVLGVGENLVKPRPLESVNLP--ARRPRDSSLNTAK 277 >gi|29346135|ref|NP_809638.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|253568441|ref|ZP_04845852.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|29338029|gb|AAO75832.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|251842514|gb|EES70594.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 302 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 86/290 (29%), Positives = 120/290 (41%), Gaps = 39/290 (13%) Query: 4 LVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-------------DLLKPKDFASFF 46 ++IG NG QI LSS V + PDI D+ F Sbjct: 5 IIIGANGFTGRQILNDLSSKAQYKVTGCSL-HPDILPKNGGNYHFITTDIRDEAVVKQLF 63 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+IN +A + D E E A+ N +A +S I++STD+VFDG Sbjct: 64 KDVQPDVVINCSALSVPDYCETHHEEAWLTNVTAVEQLAHLCESYKSRFIHLSTDFVFDG 123 Query: 107 ----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSN 157 S E S P+N YG +K GEEKV +NY I R VY G+ Sbjct: 124 KIDEKSGQLYTEKSLPAPVNYYGFTKWKGEEKVTEICSNYAIARVEIVYGKALPGQHGNI 183 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 L M RL +EI VV DQ+ TPT ++ + +L+EN + GIFH+ + Sbjct: 184 VQLVMNRL-NAGQEIRVVSDQWRTPTYVGDVSAGV----QHLVEN---AANGIFHICGE- 234 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 AE F + S V+ T++ RP +S + +K Sbjct: 235 ---ECLTIAEIAFQVADYMKLDRSLVHPATTEEMQEATPRPRFSGMSIAK 281 >gi|302675845|ref|XP_003027606.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8] gi|300101293|gb|EFI92703.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8] Length = 307 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 20/220 (9%) Query: 1 MKCLVIGNNG----QIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSF 49 MK ++ G +G I ++ S +D E+I + G +DL S Sbjct: 1 MKIVITGASGVLGSAIRKAFESASGKDYEVIPLSHSQSGNGLIPLDLTDSGKVEELLSSK 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD +I+ AA D AE +PE A +NA +AK + S+G YISTDYVFDG Sbjct: 61 KPDWVIHCAAERRPDVAEKDPEAARRLNAAVPDQLAKLSKSLGFTLTYISTDYVFDG-KN 119 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGS-----NFLLSML 163 P SPTNPLN+YG +K GE V V +LR +Y S + + +L Sbjct: 120 PPYKPSSPTNPLNLYGVTKRDGEIAVLGVEGAKVMVLRVPVLYGPIPSGKNSESAINILL 179 Query: 164 RLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIE 201 + K++ + D + PT+ L I + + +I+ L + Sbjct: 180 DIVKDQSGKTYKMDHYAVRYPTNVLDIGKFLEKISGALAD 219 >gi|209522781|ref|ZP_03271339.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] gi|209496830|gb|EDZ97127.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] Length = 293 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 11/182 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL D + PD +I+ AA + + E+ P+I+ IN AG +A + GIP Sbjct: 48 DLTVLGDLKQVWEEIKPDAVIHAAAASKPNFCEENPDISHKINVVAAGDMASLCGAAGIP 107 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI- 153 ++ STD VFDGL+ P E P+N YG K+ E ++ + I R +Y I Sbjct: 108 YVFTSTDLVFDGLN-PPYRETDLVCPINTYGGQKVKAEGEILARYPKAAICRMPLMYGIA 166 Query: 154 --FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 G +F+ ++ K +++ D+F TP S AR L+ + + GI Sbjct: 167 SPHGGSFIQGFIKTLKSGNCLNLFEDEFRTPVSGTTAARG-------LLLAIEKKVNGIL 219 Query: 212 HM 213 H+ Sbjct: 220 HL 221 >gi|242791620|ref|XP_002481794.1| NAD dependent epimerase/dehydratase family protein [Talaromyces stipitatus ATCC 10500] gi|218718382|gb|EED17802.1| NAD dependent epimerase/dehydratase family protein [Talaromyces stipitatus ATCC 10500] Length = 312 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 24/246 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 +L P D P V+++ AA D E PE A IN E A+A+ ++ GI Sbjct: 46 NLEDPADVKRILDEAKPQVVVHCAANRQPDACEKNPEQARKINVEATRALAEGTNARGIL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF GL P + + TNP NIYG+ K GEE V T V+LR + Sbjct: 106 LIYISTDYVFAGLEGEAPYETDAKTNPTNIYGEMKRDGEEAVLEATKETGLGVVLRVPVL 165 Query: 151 Y---SIFGSNFLLSMLRLAKERRE--ISVVCDQFGT--PTSALQIARAIIQIAHNLI--E 201 Y G + + ++L ++ ++ ++ D + PT+ + R IA I + Sbjct: 166 YGPTEYNGESAVNTILDAVEKSKDPNANIKMDDWARRFPTNTQDVGRVCNDIAVRYIRDK 225 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYI----------FWESAERGGPYSKVYRIFTKQY 251 N+ SL I H +A+ + + A+ I + E P + V R + Sbjct: 226 NNIKSLPKILHFSAEEDMTKY-EMAQRIAKILEVKIPGMIANKEGNDPNAAVKRPYNTHL 284 Query: 252 PTKAHR 257 TKA R Sbjct: 285 STKALR 290 >gi|307153579|ref|YP_003888963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306983807|gb|ADN15688.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 300 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%) Query: 7 GNNGQIAQS----LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 GN G+IA S + C + + V +DL F +P +I+ AA + Sbjct: 15 GNLGKIAASEWDIYGTYCAHPLTLKDVTLIPVDLTDFPSLKQLFAEVNPTAVIHTAAQSK 74 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + + PE ++ IN + IA IPC++ STD VF+GL+ P E P +P++ Sbjct: 75 PNFCQQYPEQSYRINVTASLNIAGLCADYNIPCVFTSTDLVFNGLN-APYKETDPVSPIS 133 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERREISVVCDQF 179 YG+ K+ EE + I R ++ + +F+ ++ + +EI++ D+F Sbjct: 134 YYGEQKVLAEEGMRKIYPKTAICRMPLMFGLSSPTAESFIQPWIKSLNQGKEINLFIDEF 193 Query: 180 GTPTSALQIARAII 193 TP S AR ++ Sbjct: 194 RTPVSGSTAARGLL 207 >gi|168699195|ref|ZP_02731472.1| hypothetical protein GobsU_06715 [Gemmata obscuriglobus UQM 2246] Length = 724 Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 2/181 (1%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G G + + C + + + R + D+ P + P ++N A Y Sbjct: 446 LLTGGAGPLGAAFLRACACRGLAVAAPARDECDITDPASVGAALTRLRPWAVVNAAGYAK 505 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E E NA+G +A A + G+P + STD VFDG S P E + PL+ Sbjct: 506 VDAAEAEAERCRRHNADGPAVLAAACATAGLPLVTFSTDLVFDGRSTRPYFEGAAPEPLS 565 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFGT 181 +YG +K E +V + +++RT ++ + G NF+ LR + D T Sbjct: 566 VYGAAKAEAERRVLTSHAGALVIRTGPLFGPWDGRNFVAQALRALRTGVPFPAADDLVTT 625 Query: 182 P 182 P Sbjct: 626 P 626 >gi|307595552|ref|YP_003901869.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM 14429] gi|307550753|gb|ADN50818.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM 14429] Length = 295 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 22/196 (11%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +D A + PDV+I+ AA VD+ E++ E+ + +N + + AA G Y+S Sbjct: 49 RDSARLINDYKPDVVIHMAAIGNVDQCEEQLELCYRVNVVASRDLLTAAYRSGSAIYYLS 108 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------ 153 TDYVFDG R E P+N YG +KL EE + + I+R AW+Y Sbjct: 109 TDYVFDG-ERGMYSEDDAPRPVNYYGLTKLMAEEITRALGGS--IIRVAWIYGTGPGRAN 165 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 FG + ++R ++ + DQ+ +PT I A +++ D GI H+ Sbjct: 166 FGKTVVEKLMR----GEVVTAITDQWSSPTLNTIIGEAFVKLL-------DMRFSGIIHV 214 Query: 214 TADGGPVSWADFAEYI 229 G +S +FA+ I Sbjct: 215 V--GPRLSRYEFAKAI 228 >gi|320040797|gb|EFW22730.1| NAD dependent epimerase/dehydratase [Coccidioides posadasii str. Silveira] Length = 315 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 81/171 (47%), Gaps = 14/171 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-------PDI---DLLKPKDFASFFLSFS 50 K LV G +G + + + + +DV VG+ P I DL P + S Sbjct: 3 QKALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPHIVKADLTNPSEIESLLAEVK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SR 109 P V+++ AA D+ + P++A +N E A+AKA I IYISTDYVF G Sbjct: 63 PQVVVHCAANRFPDQCDAHPDLARKVNVEATKALAKATLQRSILLIYISTDYVFPGRPGE 122 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSN 157 P + S T P NIYG++KL GE V T V+LR +Y +N Sbjct: 123 APYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLYGSADTN 173 >gi|114603289|ref|XP_001146552.1| PREDICTED: methionine adenosyltransferase II, beta isoform 3 [Pan troglodytes] gi|76879702|dbj|BAE45720.1| putative protein product of Nbla02999 [Homo sapiens] Length = 259 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL F P VI++ AA D E++P+ A +N + +G + Sbjct: 61 RRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNL 120 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A ++G IYIS+DYVFDG + P E PLN+YGK+KL GE+ V + Sbjct: 121 AKEAAAVGAFLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAV 179 Query: 145 LRTAWVY 151 LR +Y Sbjct: 180 LRIPILY 186 >gi|296413040|ref|XP_002836226.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630035|emb|CAZ80417.1| unnamed protein product [Tuber melanosporum] Length = 309 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 12/193 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + A P V+++ AA DK + +PE +N + + ++A+ + I Sbjct: 46 VDLGNAGEVAGLLEEVKPKVVVHCAAERFPDKCDADPEGVKRLNVQASNSLAQECANRDI 105 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 IYISTDYVFDG P + + TNP N YG++KLAGE+ V S V+ R +Y Sbjct: 106 ILIYISTDYVFDGKPGAAPYEADAATNPANFYGETKLAGEQAVLSAWRKSVVFRIPVLYG 165 Query: 153 IF------GSNFLLSML--RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 N LL M+ + KER E+ ++ PT+ +AR + +A D Sbjct: 166 EVEESKESAVNVLLDMVLNKAGKERVEMDHWSIRY--PTNTSDVARVLKDVAERYTSADD 223 Query: 205 -TSLRGIFHMTAD 216 SL + +++ Sbjct: 224 IDSLPKVLQFSSE 236 >gi|149726118|ref|XP_001503384.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Equus caballus] Length = 323 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 23/252 (9%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL P VI++ AA D E++P+ A +N + + + Sbjct: 50 RRARPKFEQVNLLDSDAVRHIVHDVQPHVIVHCAAERRPDVVENQPDAASRLNVDASRNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 AK A +IG IYIS+DYVFDG + P E +PLN+YGK+KL GE+ V + Sbjct: 110 AKEAAAIGAFLIYISSDYVFDG-TNPPYREEDIPSPLNLYGKTKLEGEKAVLENNLGAAV 168 Query: 145 LRTAWVY----SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 LR +Y + S + ++ + ++ Q PT +A Q+A + Sbjct: 169 LRIPVLYGEVEKLEESAVTIMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM 228 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRIFTKQYPTKAH 256 D S++G FH W+ + +E A+ S R T A Sbjct: 229 --LDPSIKGTFH---------WSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAL 277 Query: 257 RPAYSCLDCSKL 268 RP + LDCSKL Sbjct: 278 RPRNAQLDCSKL 289 >gi|115956281|ref|XP_001192506.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] Length = 231 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 12/169 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ AA D E +P+ +N IA + +GI +YIST+YVFDG ++ Sbjct: 10 PDVVIHAAAERRTDVVERDPQTVQKLNVGATAVIASVCEKLGILLVYISTNYVFDG-TKP 68 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF------GSNFLLSMLR 164 P NPLN YG+SK GE + VILR +Y + +LL ++ Sbjct: 69 PYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYGSIERLNESAATYLLHQIQ 128 Query: 165 LAKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ +CD Q PT +A ++Q+A + S GI H Sbjct: 129 --DDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGERVS--GILH 173 >gi|115927421|ref|XP_799081.2| PREDICTED: similar to Methionine adenosyltransferase II, beta, partial [Strongylocentrotus purpuratus] Length = 222 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 12/169 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ AA D E +P+ +N IA + +GI +YIST+YVFDG ++ Sbjct: 1 PDVVIHAAAERRTDVVERDPQTVQKLNVGATAVIASVCEKLGILLVYISTNYVFDG-TKP 59 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF------GSNFLLSMLR 164 P NPLN YG+SK GE + VILR +Y + +LL ++ Sbjct: 60 PYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYGSIERLNESAATYLLHQIQ 119 Query: 165 LAKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ +CD Q PT +A ++Q+A + S GI H Sbjct: 120 --DDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGERVS--GILH 164 >gi|221122492|ref|XP_002157953.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Hydra magnipapillata] Length = 295 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 84/309 (27%), Positives = 132/309 (42%), Gaps = 40/309 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVG-------RPDIDLLKPKDFASFFLSFSP 51 MK ++ G +G + +S+ V + E++ +G +DL +D F P Sbjct: 1 MKVVISGASGLLGRSIYRELVNNTKWEVLGLGFTRLGGNLHKVDLCNEEDLKRFIEKEKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV I+ AA D E +N I+K + G +YISTDYVFDG + P Sbjct: 61 DVFIHSAAERRPDFVASNKEHTTQLNITSTKIISKLMNQNGGFVLYISTDYVFDGFN-PP 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SIFGSNFLLSM 162 NPLN YG SK GE + NY ILR +Y ++ G L + Sbjct: 120 YKTTDIPNPLNEYGLSKREGEICILENCTNYGILRVPILYGEVEYLQESAVTG---LFEL 176 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIA-HNLIENSDTSLRGIFHMTADGGPVS 221 L+ +K +++S +F PTS IA QI +N + N S GI+H +++ Sbjct: 177 LKDSKTPKKVSNYEQRF--PTSTDDIAVVCRQIVEYNRLNN---SFHGIWHWSSNQKMTK 231 Query: 222 W--ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC-LDCSKLANTHNIRIST 278 + + +F S + P ++ P+ Y C LDCS L + + + Sbjct: 232 YKIVEIMAQVFNLSMKHIEPDNE---------PSVGVSRPYDCELDCSNLIDLGIGKQTD 282 Query: 279 WKEGVRNIL 287 +KE ++ L Sbjct: 283 FKENIKKYL 291 >gi|149189654|ref|ZP_01867936.1| spore coat polysaccharide synthesis [Vibrio shilonii AK1] gi|148836466|gb|EDL53421.1| spore coat polysaccharide synthesis [Vibrio shilonii AK1] Length = 285 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G G + + EI +D+ F F PD +I+ AA Sbjct: 5 RILITGAGGFFGTRFINRYQGEFEIKGTDVAQLDITDNSAVNQIFTEFQPDFVIHAAAIA 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 D + PE+A +N +GA +AKA +G ++IST+ VF+G S P E S P Sbjct: 65 VTDFCNEHPEVAHKVNVQGAINVAKACKQVGAKLVFISTEQVFNGNSEAGPYTEQSIPVP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +YG++KL E ++AS +LR W++ + Sbjct: 125 DTVYGQNKLEAERELASILPEMWVLRFTWLFGL 157 >gi|123410516|ref|XP_001303722.1| dTDP-4-dehydrorhamnose reductase [Trichomonas vaginalis G3] gi|121885122|gb|EAX90792.1| dTDP-4-dehydrorhamnose reductase, putative [Trichomonas vaginalis G3] Length = 285 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 6/172 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G +G + + L S ++ ++ ++DL + S +P +II+ AA + Sbjct: 5 LVTGGSGFLGRRLVSHLSKNYTVVAPTHGELDLTDREKIISEVTKINPQIIIHTAAISNT 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLN 122 E PE++ SIN G +A+AA I I+ S+D +++G + P+ E +P+N Sbjct: 65 GLCEQNPELSESINLNGTKYLAEAASKINSKLIFCSSDQIYNGNAEKGPLSEDIDVHPVN 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF-----LLSMLRLAKER 169 +YGK KL E K+ V LR W+Y S L ML AKE+ Sbjct: 125 VYGKHKLEAERKLQEILPTSVSLRLTWMYDHPSSKIPQHKNLPIMLLEAKEK 176 >gi|289807748|ref|ZP_06538377.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 112 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 GE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ DQ+G PT A +A Sbjct: 1 GEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLAD 60 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + + + G++H+ A GG +W D+A +F E+ + G Sbjct: 61 CTAHAIRVTLNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKAG 104 >gi|169616109|ref|XP_001801470.1| hypothetical protein SNOG_11227 [Phaeosphaeria nodorum SN15] gi|160703115|gb|EAT81726.2| hypothetical protein SNOG_11227 [Phaeosphaeria nodorum SN15] Length = 225 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 20/190 (10%) Query: 28 RVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 RV PD+ D+L K+ +PDV+++ AA D PE A IN + + A+ Sbjct: 28 RVVLPDVIKLDILDQKEVERVLDETAPDVVVHCAANRFPDSCTANPEAARKINVDSSRAL 87 Query: 85 AKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT---- 139 A+A + GI IYISTDYVF G P + S NP N+YG++KL GE+ V Sbjct: 88 AEATTARGIFLIYISTDYVFSGKRGEAPYEPESSPNPPNVYGQTKLDGEKAVLEVATQRG 147 Query: 140 --NNYVILRTAWVYSIFGS------NFLLSML----RLAKERREISVVCDQFGTPTSALQ 187 N V+LR +Y N L+S L +L +R +I V PT+ Sbjct: 148 SQNKVVVLRVPVLYGSCDEPKESAVNVLMSQLWASQKLEDDRTKIQVDDYALRFPTNTQD 207 Query: 188 IARAIIQIAH 197 + R I+ Sbjct: 208 VGRVCRDISK 217 >gi|108763033|ref|YP_632780.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622] gi|108466913|gb|ABF92098.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622] Length = 300 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 17/212 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGR-----------PDIDLLKPKDFASFFLS 48 M+ LV G+NG + + S+ Q +++ +GR +DL + D A+ + Sbjct: 1 MRFLVTGSNGLVGSRVCSLLHQGGHQVVGLGRGARRTGGAYGYASVDLTREADVAAAVET 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P+V+I+ A+ T VD E +PE A++ N A A+A++A G +++STDYVFDG + Sbjct: 61 AAPEVVIHCASMTEVDACEKDPEAAYAGNVTAAAAVARSARKAGAHLVHVSTDYVFDGEA 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGS-NFLLSMLR 164 P E + NP +Y +K GE+ I RTA VY + G NF ++ Sbjct: 121 -GPYSEDAIPNPRGVYSVTKHMGEQAARMLAPGCAIARTAVVYGWPPVEGRLNFGAWLVT 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIA 196 ++ +++ + DQ +P+ A +A ++++ Sbjct: 180 ALEKGQQVRLFEDQIVSPSFADNVAAMLVELG 211 >gi|26987239|ref|NP_742664.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] gi|24981880|gb|AAN66128.1|AE016241_5 dTDP-4-rhamnose reductase-related protein [Pseudomonas putida KT2440] Length = 294 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR I+ + L + + L G +H + A + I E+ + Sbjct: 183 NPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQ----- 234 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 YR Q PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 235 ---YRQLAVQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|312220379|emb|CBY00320.1| similar to NAD dependent epimerase/dehydratase family protein [Leptosphaeria maculans] Length = 282 Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 27/227 (11%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 EIIR +D+L ++ P V+++ AA D +PE A +N E + ++ Sbjct: 4 EIIR-----LDVLDRREIERVLDETKPKVVVHCAANRFPDSCTADPEAAVKLNVESSRSL 58 Query: 85 AKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-- 141 A+A + GI IYISTDYVF G P SPT+P N+YG++KL GE+ V N Sbjct: 59 AEATVARGIFLIYISTDYVFSGRPDEAPYKVDSPTSPPNVYGQTKLDGEKAVLQVARNSG 118 Query: 142 ----YVILRTAWVYSIFGS------NFLLSML----RLAKERREISVVCDQFGTPTSALQ 187 V+LR +Y N L+S L +A + +I V PT+ Sbjct: 119 ARNIVVVLRVPVLYGSADEPKDSAVNVLMSQLWAAQNIAPGQPKIQVDDYALRYPTNTQD 178 Query: 188 IARAIIQIAHNLIE--NSDTSLRGIFHMTADGGPVSW---ADFAEYI 229 + R IA ++ N+D +L I +++ W FAE + Sbjct: 179 VGRVCRDIAKVYLDPANADRNLPQILQFSSEDCMTKWQICQKFAEIM 225 >gi|193214981|ref|YP_001996180.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] gi|193088458|gb|ACF13733.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] Length = 300 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 18/172 (10%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + P+VII+ AA + E + E A +IN IA + GI I+ISTD VFDG + Sbjct: 68 WKPEVIIHTAALSEPGACEWQRETAEAINTRAVKFIADLCEHFGIRLIFISTDLVFDG-T 126 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 + E P NPLN Y ++K EE VAS ++YVILRT+ + + LR E Sbjct: 127 KGDYLETDPPNPLNFYAETKCRAEEIVASSLHDYVILRTSLLLGASPQS-----LRSLDE 181 Query: 169 R--------REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 R + ++ D++ P +A +A +++A ++ S+ G+FH Sbjct: 182 RLKADGEAGKTMTFFTDEYRNPIAASVLADITLKLA----SGNNRSVTGLFH 229 >gi|164656146|ref|XP_001729201.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966] gi|159103091|gb|EDP41987.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966] Length = 819 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 22/235 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR---------PDIDLLKPKDFASFFLSFSP 51 MK LV G +G + +++ C++ + VG +DL P Sbjct: 3 MKVLVTGASGLLGRAVMQTCIRAGHHV-VGLAFSRASDAIQQLDLTDADAVYDVVRREHP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSR 109 +V+IN AA D E P+ +N E +AKA + P I+ISTDYVFDG + Sbjct: 62 EVVINLAAERRPDVVEQNPDAVKKLNVEAPAVLAKACRELDPPAYLIHISTDYVFDGRN- 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKV--ASYTNNYVILRTAWVY--SIFGSNFLLSMLRL 165 P TNPLN YG+SK GE V ++ + LR +Y ++F +++L Sbjct: 121 PPYAVTDATNPLNAYGRSKRDGESAVLASALPGHATNLRLPVLYGETLFPGESAVNVLLE 180 Query: 166 AKERREISVVCDQFGT--PTSALQIARAIIQIA---HNLIENSDTSLRGIFHMTA 215 A + RE + D PT+ +AR I Q+A + +S + + H +A Sbjct: 181 AIQPRESRIRMDAHSVRYPTNVTDVARVIEQLATLYQKRLHSSSSPMPSALHFSA 235 >gi|212637298|ref|YP_002313823.1| NAD dependent epimerase/dehydratase family protein [Shewanella piezotolerans WP3] gi|212558782|gb|ACJ31236.1| NAD dependent epimerase/dehydratase family protein [Shewanella piezotolerans WP3] Length = 303 Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 21/230 (9%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQ-DVEIIRVGRPD-------IDLLKPKDFASFFLSFSP 51 +K +V G G + +++ + + Q DVE++ G +DL +F + P Sbjct: 2 VKVMVTGATGLLGRAVVAELEAQPDVEVLACGYSRAVQGVHRLDLTLSSQVTAFIETHQP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI++ AA D +E P A ++NA+ + AA G +Y+STDYVFDG + P Sbjct: 62 DVIVHCAAERRPDISEQNPAAALALNADATRLLTLAASQCGAWLLYVSTDYVFDG-TAPP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAK 167 +E S TNP+N YG SK GE V + +LR +Y ++ S ++ + +L Sbjct: 121 YNEHSATNPVNFYGDSKRQGEMIVTEAKQGFAVLRLPILYGAVETLQESAVMVLLNQLLD 180 Query: 168 ERREISVVCDQFG--TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 E + D + +PTS IA AI ++ ++ + L G +H +A Sbjct: 181 ENEQF---VDDWAVRSPTSTEDIASAIAKMIS--LKTTGAHLAGHYHFSA 225 >gi|119773649|ref|YP_926389.1| NAD dependent epimerase/dehydratase family protein [Shewanella amazonensis SB2B] gi|119766149|gb|ABL98719.1| NAD dependent epimerase/dehydratase family protein [Shewanella amazonensis SB2B] Length = 301 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 111/258 (43%), Gaps = 31/258 (12%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL A+ +P VI++ AA D + P+ A ++N A+ +AA + G Sbjct: 42 LDLTDADAVAAAVAEIAPQVIVHCAAERRPDVSAQNPDAAKALNLSATEALCQAAKACGA 101 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS- 152 IYISTDYVFDG + P E + NP+N YG++KL GE+ V ILR +Y Sbjct: 102 WLIYISTDYVFDG-TEAPYAEDAAPNPVNFYGETKLMGEQAVTRLLPESAILRLPILYGE 160 Query: 153 --IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + +L ++ + ++ V PTS IA AI + +E S GI Sbjct: 161 VERLSESAVLVLIEQLLDYQKQGVDDWAVRRPTSTADIAEAIKGMIAKHVEGEKIS--GI 218 Query: 211 FH------MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCL 263 +H MT G V+ AE + +S + + PT A RP L Sbjct: 219 YHFSAAETMTKHGMVVA---LAEVLGKDSG----------HLIAQSSPTDTAKRPKDCTL 265 Query: 264 DCSKLA-----NTHNIRI 276 C +L NT R+ Sbjct: 266 SCKRLEALGLLNTRPFRV 283 >gi|302385086|ref|YP_003820908.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] gi|302195714|gb|ADL03285.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] Length = 300 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 91/170 (53%), Gaps = 7/170 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +V G+ G + +++ ++ +++ VG D+D+ + + + + +PDV+I+ AA + Sbjct: 4 KLMVTGSQGFLGGRIAAYYEKNYDVVPVGHRDLDITEEAAVSEYIKNKNPDVVIHCAAVS 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 +++PE++ ++N +GA IAKA G +++S+D ++ G + ++ S PL Sbjct: 64 NTGVCKEKPELSEAVNRKGAVNIAKACRETGSTMLFMSSDQIYGGSRKKGPNKESDEVPL 123 Query: 122 -NIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLR 164 N+YG K E+++ + + LR W+Y SN L ++LR Sbjct: 124 INVYGAHKKQAEDEILHILPDGICLRLTWMYDFPVRGLKSSSNLLTNLLR 173 >gi|330948044|ref|XP_003307046.1| hypothetical protein PTT_20367 [Pyrenophora teres f. teres 0-1] gi|311315164|gb|EFQ84873.1| hypothetical protein PTT_20367 [Pyrenophora teres f. teres 0-1] Length = 318 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 28/247 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---DLLKPKDFASFFLSFSPDVI 54 LV G +G + + + + D + R+ PD+ ++L KD + PDV+ Sbjct: 5 LVTGASGLLGRQVQREFLLDGWKSVGTGLSRITSPDVIRLNILNEKDIETVLDDTKPDVV 64 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPID 113 ++ A D PE A +N + + A+A+A S GI IYISTDYVF G P Sbjct: 65 VHCAGNRFPDSCTANPEAARKLNVDSSRALAEATTSRGIFLIYISTDYVFPGRPGDAPYK 124 Query: 114 EFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILRTAWVYSIFGS------NFLLS 161 S +P N YG++KL GE V A N V+LR +Y N L+S Sbjct: 125 IDSTPSPPNFYGQTKLEGEHAVLDVARKAGAKNKVVVLRVPILYGSCDEPKESAVNILMS 184 Query: 162 MLRLAKERREIS--VVCDQFGT--PTSALQIARAIIQIAHNLIE--NSDTSLRGIFHMTA 215 L A++ +E + D + PT+ + R IA ++ N+D L I ++ Sbjct: 185 QLWNAQQIQESQPKIQVDDYALRYPTNTQDVGRVCRDIAKLYLDPVNADRELPEILQFSS 244 Query: 216 DGGPVSW 222 + W Sbjct: 245 EDRMTKW 251 >gi|148545785|ref|YP_001265887.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] gi|148509843|gb|ABQ76703.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] Length = 294 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLVQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR I+ + L + + L G +H + A + I E+ + Sbjct: 183 NPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQ----- 234 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 YR Q PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 235 ---YRQLAVQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|158337932|ref|YP_001519108.1| RmlD substrate binding domain-containing protein [Acaryochloris marina MBIC11017] gi|158308173|gb|ABW29790.1| RmlD substrate binding domain [Acaryochloris marina MBIC11017] Length = 299 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 20/208 (9%) Query: 2 KCLVIGNNG-------QIAQS----LSSMCVQDVEIIRVGRPDIDLLKPKDFASF---FL 47 K L+ G +G Q+AQS + VEI +DL +DFAS Sbjct: 12 KLLITGASGFLGWYLCQVAQSSWQVFGTAYSHAVEIPGCSVVTVDL---RDFASLKQVLQ 68 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD +I+ AA + EP+ +IN E + +A IP +++STD VFDG Sbjct: 69 TVQPDAVIHAAAQARPHVCQAEPQSTHAINVEASWTLADLCGESQIPLLFVSTDLVFDG- 127 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRL 165 P E +P+N YG+ K+ E+ + + VI R ++ + ++F+ M++ Sbjct: 128 QDPPYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFGVTPHAASFIQPMIQN 187 Query: 166 AKERREISVVCDQFGTPTSALQIARAII 193 + + + D+F TP S L AR I+ Sbjct: 188 LEAGIALQLFEDEFRTPVSGLDAARGIL 215 >gi|255009242|ref|ZP_05281368.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313146992|ref|ZP_07809185.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313135759|gb|EFR53119.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] Length = 296 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 31/299 (10%) Query: 4 LVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI-----------DLLKPKDFASFFLS 48 L+IG NG +I LS+ + +V + R DI D+ F Sbjct: 5 LIIGANGFTGRRILNDLSAKPIYNVTGCSL-RDDICPGKGYRFVRTDIRDTDAVQRLFNE 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD++IN +A + D E A + N I+ A + G I++STD+VFDG S Sbjct: 64 SQPDIVINTSALSVPDYCETHHAEAEATNVTAVETISHACEQYGSRFIHLSTDFVFDGKS 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 E +P+N YG +KL E+ VA +NY I+R VY + ++L+L Sbjct: 124 NQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYGKALTGQHGNILQLVAN 183 Query: 169 R----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 R I VV DQ+ TPT I+ + ++ + GI+H+ + Sbjct: 184 RLRKGEPIRVVSDQWRTPTFVGDISEGVKKLMFH-------PSNGIYHICGN----ECLT 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE + + S + + T++ RP +S L K T +EG+ Sbjct: 233 IAEIAYRVADFLKLDRSLIEPVTTEEMQEATPRPRFSGLSIEKAKTEIGYNPHTLEEGM 291 >gi|167031561|ref|YP_001666792.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] gi|166858049|gb|ABY96456.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] Length = 308 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/298 (23%), Positives = 121/298 (40%), Gaps = 24/298 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 17 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWTPASLTQLLDDHRPDALVNLAYY 76 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 77 FDWFQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAKERREISVVCDQ 178 L + G++ E+ V + +V+LR W+ SI GS L L A++ +E+ + D+ Sbjct: 137 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGS--LGRFLTRAEQPQELLLADDR 194 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT AR I+ + L + + L G +H + A + I E+ + Sbjct: 195 RGNPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILTEAGQ--- 248 Query: 239 PYSKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +R Q PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 249 -----HRQLAVQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 301 >gi|71022409|ref|XP_761434.1| hypothetical protein UM05287.1 [Ustilago maydis 521] gi|46101303|gb|EAK86536.1| hypothetical protein UM05287.1 [Ustilago maydis 521] Length = 1249 Score = 76.3 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 29/239 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPD-------IDLLKPKDFASFFLSFS 50 MK L+ G +G + +++ C+ D + + + R D +DL + Sbjct: 1 MKVLITGASGLLGRAVHQHCIDKGYDSKALALTRSDPSKQLVKLDLTDTAAVELCLREYQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPC-IYISTDYVFDGLS 108 PD+I++ AA D E +P + +IN + +IA A + P + ISTDYVFDG S Sbjct: 61 PDLIVHTAAERRPDVVEKDPAASHAINVDAPASIATLASQLENAPLLVNISTDYVFDG-S 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIF------GSNFLL 160 + P NPLN YG SKL GE VAS+ + LR +Y N LL Sbjct: 120 KPPYTVDDAPNPLNAYGVSKLQGERAVASHAKPGYFTNLRVPVLYGKTITNDESAVNVLL 179 Query: 161 SMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTA 215 + ++ ++ CD + PT+ +A+AI+++A ++DTS L I H +A Sbjct: 180 NAIQPPPGSTDLQ-KCDAYAVRYPTNVQDVAKAILKLAE---VHTDTSRPLPPITHFSA 234 >gi|53713484|ref|YP_099476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|52216349|dbj|BAD48942.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] Length = 296 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PD++IN +A + D E A + N IA + G Sbjct: 50 DIRDENEVRKLFKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSR 109 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VFDG S E P+N YG +KL E+ +AS +NY I+R VY Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKA 169 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R I VV DQ+ TPT I+ + ++ + + GI Sbjct: 170 LPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFH-------TANGI 222 Query: 211 FHM 213 +H+ Sbjct: 223 YHI 225 >gi|309778182|ref|ZP_07673116.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 3_1_53] gi|308914053|gb|EFP59859.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 3_1_53] Length = 289 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G NG IA + +EI+ + R D+DL + +F + D + + A Sbjct: 3 KIVITGGNGFIASLVKEALHDTMEIVSLTRKDLDLGDIEAVRKWFTEHAYDYVFHTGAMA 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 E+ PE+ IN E IAKA I+IST+ F+G + P E +P Sbjct: 63 QTADCENYPELTHRINVECTQEIAKACQDKKARLIFISTEQCFNGKTEAGPFHEDTPLCS 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + YG K+ E + S ++YVILR +W+ + Sbjct: 123 VTAYGNHKVECERFITSMLDSYVILRFSWMLGM 155 >gi|60681728|ref|YP_211872.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis NCTC 9343] gi|253565473|ref|ZP_04842928.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5] gi|60493162|emb|CAH07943.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis NCTC 9343] gi|251945752|gb|EES86159.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5] gi|301163271|emb|CBW22821.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis 638R] Length = 296 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PD++IN +A + D E A + N IA + G Sbjct: 50 DIRDENEVRKLFKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSR 109 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VFDG S E P+N YG +KL E+ +AS +NY I+R VY Sbjct: 110 FIHLSTDFVFDGKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKA 169 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R I VV DQ+ TPT I+ + ++ + + GI Sbjct: 170 LPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFH-------TANGI 222 Query: 211 FHM 213 +H+ Sbjct: 223 YHI 225 >gi|66047703|ref|YP_237544.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] gi|63258410|gb|AAY39506.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] Length = 294 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAER 236 PT AR II + L + + L G +H + A E + Sbjct: 183 NPTPVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAI 240 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ N+L Sbjct: 241 ESPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPNLL 287 >gi|293572517|ref|ZP_06683496.1| dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] gi|291607434|gb|EFF36777.1| dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] Length = 111 Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG ++ Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKTK 110 >gi|37522690|ref|NP_926067.1| methionine adenosyltransferase [Gloeobacter violaceus PCC 7421] gi|35213692|dbj|BAC91062.1| glr3121 [Gloeobacter violaceus PCC 7421] Length = 295 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 18/240 (7%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+ L + +F + PD +++ AA + + E P +A +N A+A+ A G Sbjct: 48 DLALEDLSELEAFVGRYRPDALVHCAAISEAAQCEANPTVALRVNVAATEALARTAGRTG 107 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVY 151 +++STD VFDG P E S +PL YG++K+A E++V + +++RT+ + Sbjct: 108 CRFVFVSTDLVFDG-REAPYCEESLPSPLGCYGRTKMAAEQRVLELGDGGALVVRTSLLL 166 Query: 152 --SIFGSNFLLSML--RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S G+ + L +LA +R ++ D+F +P A +A A+++ L+E + Sbjct: 167 GPSPSGARSVEERLGAQLAAGKR-ANLFTDEFRSPVYAPDLAAALLE----LVEAGQS-- 219 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 G+ H+ GGP + A I + G + + YP+ RP LD + Sbjct: 220 -GLLHL---GGPERLSRHALGILL-AGHFGWDTRLILAASGRDYPSTPPRPTDVSLDSRR 274 >gi|104779834|ref|YP_606332.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas entomophila L48] gi|95108821|emb|CAK13517.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas entomophila L48] Length = 294 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 62/291 (21%), Positives = 113/291 (38%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPEGGWDPASLTLLLDEHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLAQQERAVERLAELCQHHEIVLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L A++ +E+ + D+ G Sbjct: 123 LGVRGQALWRIEQSVRATCPQHVLVRFGWLLDESLDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAER 236 PT AR I+ + L + L G +H + + A AE + W Sbjct: 183 NPTPVDDAARVILSVLKQL--DCKAPLWGTYHYAGNEATTPLALGQAILAEAVQWRQLAV 240 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 241 QQPTAQAH----AARPDASEEPQHAVLACKKILHTFGIKPRAWRSGLPPLL 287 >gi|197124809|ref|YP_002136760.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter sp. K] gi|196174658|gb|ACG75631.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter sp. K] Length = 298 Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 69/240 (28%), Positives = 102/240 (42%), Gaps = 15/240 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL L F +++ A T VD E EPE+A+ N G +A+A ++G Sbjct: 46 DADLSDGHSVERALLEFRAGAVLHAGAMTDVDGCEREPELAWRANVGGTEQVARACRALG 105 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 + +STDYVFDG +R E +P Y ++K GEE + + R A VYS Sbjct: 106 ARLVAVSTDYVFDG-TRGGYREDDVPDPRGAYARTKRCGEEAALVIAPDAAVARVAVVYS 164 Query: 153 IFGS---NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 F ++ + DQ +PT A A +++ L+E+ RG Sbjct: 165 GRRGAKPTFATQVVEKLSRGEPVKAFSDQVVSPTLAESAAEMTLEL---LLEH---DYRG 218 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + H TA + DFA + A R G ++ + T A RP S LD S+ A Sbjct: 219 VLH-TAGATALDRVDFARRV----AARFGLAGEIVPVRTADVKLLAPRPLRSGLDVSRAA 273 >gi|299742513|ref|XP_001832535.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea okayama7#130] gi|298405218|gb|EAU89284.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea okayama7#130] Length = 300 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 MK +V G +G + ++ + Q +++ + G +DL + F F PD Sbjct: 1 MKVIVTGASGVLGSAVKAAFEQAQADVLGLAFSRAGPGLEKLDLTDKEAVEKKFSEFKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I+ AA D AE +P +N G +++ + +G +YISTDYVFDG + P Sbjct: 61 WVIHCAAERRPDVAEKDPAACKILNEGVPGHLSQLSKQLGFTLVYISTDYVFDGQA-PPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVY------SIFGSNFLLSMLRL 165 SPTNPLN+YG +K GE V ++LR +Y S N L+ +++ Sbjct: 120 QPSSPTNPLNLYGVTKRDGEVAVLGVEGAKTIVLRVPVLYGPAPKNSDSAVNILVDVVQ- 178 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIA 196 + ++ + D PT+ L IA+ +++++ Sbjct: 179 DQSGKQYKMDHDATRYPTNVLDIAKFLVRLS 209 >gi|189210066|ref|XP_001941365.1| methionine adenosyltransferase 2 subunit beta [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977458|gb|EDU44084.1| methionine adenosyltransferase 2 subunit beta [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 385 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 37/256 (14%) Query: 4 LVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---DLLKPKDFASFFLSFSPDVI 54 LV G +G + + + + D + R+ PD+ D+L K+ + + PDV+ Sbjct: 62 LVTGASGLLGRQVQREFLLDGWKSVGTGLSRIASPDVVRLDILNEKEIETVLDNTKPDVV 121 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPID 113 ++ AA D PE A +N + + A+A+A S I IY+STDYVF G P + Sbjct: 122 VHCAANRFPDSCTANPEAARKLNVDSSRALAEATTSRDIFLIYLSTDYVFSGRPGDAPYN 181 Query: 114 EFSPTNPLNI---------YGKSKLAGEEKV------ASYTNNYVILRTAWVYSIFGS-- 156 S +P N+ YG++KL GE+ V A N V+LR +Y Sbjct: 182 TDSTPSPPNLVEGAHSNLRYGQTKLEGEQAVLDVARKAGTKNQVVVLRVPILYGSCDEPK 241 Query: 157 ----NFLLSMLRLAKERR--EISVVCDQFGT--PTSALQIARAIIQIAHNLIE--NSDTS 206 N L+S L A++ + + V D + PT+ + R IA ++ N+D Sbjct: 242 ESAVNILMSQLWSAQQIQDSQPKVQVDDYALRYPTNTQDVGRVCRDIAKLYLDPVNADRE 301 Query: 207 LRGIFHMTADGGPVSW 222 L GI +++ W Sbjct: 302 LPGILQFSSEDRMTKW 317 >gi|265763752|ref|ZP_06092320.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|263256360|gb|EEZ27706.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] Length = 296 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 11/183 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PD++IN +A + D E A + N IA + G Sbjct: 50 DIRDENEVRKLFKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSR 109 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD+VFDG S E P+N YG +KL E+ +AS +NY I+R VY Sbjct: 110 FIHLSTDFVFDGKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKA 169 Query: 155 GSNFLLSMLRLAKER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++L+L R I VV DQ+ TPT I+ + ++ + + GI Sbjct: 170 LPGQHGNILQLVANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFH-------TANGI 222 Query: 211 FHM 213 +H+ Sbjct: 223 YHI 225 >gi|222053767|ref|YP_002536129.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221563056|gb|ACM19028.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 291 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 10/222 (4%) Query: 5 VIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 + G++G++ +LS+ + ++ + R D+ P+++IN AA+ V Sbjct: 9 IFGSSGKVGSALSTAFAKGRYTLVPITRATCDVRDHDQVRRRLQQIKPELVINAAAFNGV 68 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E +P A +N +A+ + S G ++IS+D VF G R E S +P+N+ Sbjct: 69 DACEKDPHQALLVNTLFPRLLAELSASQGFLLVHISSDAVFSGTGRETYAESSAASPINL 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGS-NFLLSML-RLAKERREISVVCDQFG 180 YG +K + + + + Y I R + + I GS F+ ML R+ + + + D Sbjct: 129 YGFTKYGADCFITAIAHRYYIARISVQFGITTGSPQFVEKMLERMQRSTEPLRISNDIVA 188 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 +P+ + +A AI L+E G++H+ +G W Sbjct: 189 SPSYSQDVATAI----RGLVEEKRPF--GLYHLVNEGEASLW 224 >gi|170719739|ref|YP_001747427.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169757742|gb|ACA71058.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 294 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPEDGWTPASLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEPRLAQQERSVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR I+ + L + L G +H + A + I E+ + Sbjct: 183 NPTPVDDAARVILSVLKQL--DCTAPLWGTYHYAGNEATTPLA-LGQAILAEAGQ----- 234 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +R Q PT +AH P + L C K+ +T I+ W+ G+ +L Sbjct: 235 ---HRQLAVQAPTAQAHAARPDASEEPQNAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|221130220|ref|XP_002155530.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Hydra magnipapillata] Length = 1695 Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 114/267 (42%), Gaps = 31/267 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL +D F PDV I+ AA D E +N I+K + G Sbjct: 1443 VDLCNEEDLKRFIEKEKPDVFIHSAAERRPDFVASNKEHTTQLNITSTKIISKLMNQNGG 1502 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 +YISTDYVFDG + P NPLN YG SK GE + NY ILR +Y Sbjct: 1503 FVLYISTDYVFDGFN-PPYKTTDIPNPLNEYGLSKREGEICILENCTNYGILRVPILYGE 1561 Query: 152 -------SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA-HNLIENS 203 ++ G L +L+ +K +++S +F PTS IA QI +N + N Sbjct: 1562 VEYLQESAVTG---LFELLKDSKTPKKVSNYEQRF--PTSTDDIAVVCRQIVEYNRLNN- 1615 Query: 204 DTSLRGIFHMTADGGPVSW--ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 S GI+H +++ + + +F S + P ++ P+ Y Sbjct: 1616 --SFHGIWHWSSNQKMTKYKIVEIMAQVFNLSMKHIEPDNE---------PSVGVSRPYD 1664 Query: 262 C-LDCSKLANTHNIRISTWKEGVRNIL 287 C LDCS L + + + +KE ++ L Sbjct: 1665 CELDCSNLIDLGIGKQTDFKENIKKYL 1691 >gi|295105609|emb|CBL03153.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii SL3/3] Length = 278 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 7/129 (5%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L PDVI++ AA + PE A+ N E + +A+AA IG + S+D V+ G Sbjct: 48 LQQRPDVILHTAAISDTGYCAGHPEQAYRANVELSVWLARAAAEIGAKLVAFSSDQVYAG 107 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFL 159 + ++ P+ E P P N+YG+ KL E++V + V+LR W+Y + G N Sbjct: 108 VEQSGPLPETIPLKPANVYGQGKLEMEQRVQALCPGAVLLRATWMYDLPGYRLPIRGNLP 167 Query: 160 LSMLRLAKE 168 L++LR A+ Sbjct: 168 LNLLRAAQR 176 >gi|313496867|gb|ADR58233.1| DTDP-4-dehydrorhamnose reductase [Pseudomonas putida BIRD-1] Length = 289 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 20/293 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVPLGM 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR I+ + L + + L G +H + A + I E+ + Sbjct: 181 PVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQ-------- 229 Query: 244 YRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 YR Q PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 230 YRQLAVQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 282 >gi|313900581|ref|ZP_07834074.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp. HGF2] gi|312954643|gb|EFR36318.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp. HGF2] Length = 286 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 1/151 (0%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++ G NG IA + +EII + R ++DL + S+F + D + + A Sbjct: 2 VITGGNGFIASLVKEAMQSTMEIIPLTRKELDLGETAAVRSWFNTHDYDYVFHTGAMAQT 61 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLN 122 E+ PE+ IN +G IAKA I+IST+ F+G + P E +P + Sbjct: 62 ADCENHPELTHRINVDGTKEIAKACKEKNARLIFISTEQCFNGKTEEGPFTEDTPLCSVT 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 YG K E + S +Y+ILR +W+ + Sbjct: 122 AYGNHKAECEAFITSVLEDYIILRFSWMLGM 152 >gi|303240147|ref|ZP_07326667.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] gi|302592238|gb|EFL61966.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] Length = 283 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 15/233 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G G++ +L+S + II + ++ + S ++ PD++IN A + Sbjct: 5 LLLGERGKVGTALNSELAKSYNIIGKNSENFNVADFEGVTSLIDNYKPDIVINTVAAQGI 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN---P 120 D E PE + IN+ +A+ ++ + ST+ VF P + F + P Sbjct: 65 DDCERNPERSLRINSLYPKLLAELSNKFEFLLVNFSTECVFK--DNEPGNFFIEADRPCP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--FLLSMLRLAKERRE-ISVVCD 177 LN+YG +K G+ V++ + + I R ++ N F+ ML A + E + V CD Sbjct: 123 LNVYGLTKYGGDCFVSNIAHRHYIFRLPILFGPSNKNNQFVERMLDKALNQGEKLKVSCD 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +P+ ++ IA+A+ +I N + G++H++ + G S D + IF Sbjct: 183 VITSPSYSIDIAKAVKEIIENEMP------YGLYHLS-NQGAASIYDLMKEIF 228 >gi|218438541|ref|YP_002376870.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] gi|218171269|gb|ACK70002.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] Length = 295 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 4/163 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + F +P +I+ AA + + + PE ++ IN + IA I Sbjct: 46 VDLTDFNNLKQLFADVNPTGVIHLAAQSKPNFCQQYPEPSYLINVTTSLNIAGLCADYDI 105 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 PC++ STD VFDGL+ P E P +P++ YG+ K+ E+ + VI R ++ Sbjct: 106 PCVFTSTDLVFDGLN-PPYKETDPVSPISYYGEQKVLAEQGMLQRYPKTVICRMPLMFGF 164 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAII 193 S +F+ S L ++ +E+ + D++ TP S A+ ++ Sbjct: 165 PSPVADSFIQSFLTTLQQGKELKLFIDEWRTPVSGSTAAKGLL 207 >gi|160945148|ref|ZP_02092374.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii M21/2] gi|158442879|gb|EDP19884.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii M21/2] Length = 278 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 8/160 (5%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L PD I++ AA + D PE A+ N E +A+AA IG + S+D V+ G Sbjct: 48 LQQRPDGILHTAAISDTGYCADHPEQAYRANVELPVWLARAAAEIGAKLVAFSSDQVYAG 107 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFL 159 + ++ P+ E P P N+YG+ KL E++V + V+LR W+Y + G N Sbjct: 108 VEQSGPLPETIPLKPANVYGQDKLEMEQRVQALCPGAVLLRATWMYDLPGYRLPIRGNLP 167 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 L++LR A+ + F T Q A A+++ A L Sbjct: 168 LNLLRAAQRGESVRFSVRDFRGITYVRQ-AVALLEAALTL 206 >gi|257439864|ref|ZP_05615619.1| NAD dependent epimerase/dehydratase family protein [Faecalibacterium prausnitzii A2-165] gi|257197677|gb|EEU95961.1| NAD dependent epimerase/dehydratase family protein [Faecalibacterium prausnitzii A2-165] Length = 277 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++G + + E+ R + F + PDVI++ AA + Sbjct: 3 KILISGSSGFVGSRVLHQWQGRAELFTFPRGSLAAADESAIRRFVETVQPDVILHLAALS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 + PE + NAE +AKAA G I S+D V+ G+++ P+ E P +P Sbjct: 63 DTGYCQQHPEESQRANAELPVWMAKAARDTGAKLISFSSDQVYAGVTQPGPLPETLPLSP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLLSMLRLAK 167 N YG+ KL EE+V + V+LR W+Y + G N L++L+ A+ Sbjct: 123 ANTYGQHKLEAEERVLALCPEAVLLRAPWMYDLPGDGLPLRGNLPLNLLQAAQ 175 >gi|295100776|emb|CBK98321.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii L2-6] Length = 281 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%) Query: 35 DLLKPKDFAS---FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 D L+ D ++ F L PDVI++ AA + + EPE +F N +AK A+ + Sbjct: 33 DTLRTADESAVLRFILKEHPDVIVHTAALSNTQYCQQEPEDSFRANVLLPEWVAKGAEEV 92 Query: 92 GIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 G + S+D V+ G++ R + E P +P N+YG+ KL E +V + + V LR W+ Sbjct: 93 GAKLLSCSSDQVYAGVTQRGALAETLPLSPSNVYGQHKLEAEARVLARCPDAVALRLPWM 152 Query: 151 YSIFG------SNFLLSMLRLAK 167 Y + G N L++LR AK Sbjct: 153 YDLPGYHLPIRGNLPLNILRAAK 175 >gi|330960161|gb|EGH60421.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 294 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/296 (22%), Positives = 115/296 (38%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AK+ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKDPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II I L + + L G +H A + + E Sbjct: 183 NPTPVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTE-------- 231 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ R + PT +AH P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 232 ARLLRELAIESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|226942810|ref|YP_002797883.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] gi|226717737|gb|ACO76908.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] Length = 292 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 36/304 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +++G + ++L + + DV + RP PD ++N A Sbjct: 1 MRLMLLGGGSALGRALVHLGAEADVSFL-APRPPERGWDSASLTRLLDETRPDALVNLAY 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-------IYISTDYVFDGLSRTPI 112 Y +A+ +++AE +AA+ + C + S+ VFDG T Sbjct: 60 YHDWFQAD-------TLDAERLANQERAAERLAELCQHHRIILLQPSSYRVFDGTRATAY 112 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E PL + G++ L E+ V + +V+LR W+Y L L A+ + Sbjct: 113 SEKDEPAPLGLRGQALLRVEQSVRALCPRHVLLRFGWLYDDTLDGVLGRFLLRAERESVL 172 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 ++ D+ G PT AR ++ + L + L G +H + A F + + E Sbjct: 173 ALADDRRGNPTLVDDAARVMLAVLKQL--DCQAPLWGTYHYGGHEATTALA-FGQAVLGE 229 Query: 233 SAERGGPYSKVYRIFTKQ---------YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++VYR + P A P ++ L C K+ NT I+ W+ G+ Sbjct: 230 --------ARVYRRLAVEDIQALPHGATPDAAEEPQHAVLSCRKILNTFGIKPRAWRAGL 281 Query: 284 RNIL 287 N+L Sbjct: 282 PNLL 285 >gi|28867905|ref|NP_790524.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851141|gb|AAO54219.1| lipopolysaccharide biosynthesis protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 292 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I S+ VFDG T E P Sbjct: 61 FDWFQAESVSEARLTHQERSVERLAELCQHHNITLFQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAER 236 PT AR II + L + + L G +H + A E Sbjct: 181 NPTPVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAI 238 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 ESPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 285 >gi|283852032|ref|ZP_06369307.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] gi|283572582|gb|EFC20567.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] Length = 321 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 33/285 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------------RVGRPDIDLLKPKDFASFFLSF 49 + LV G +G + +++ +D E++ V R +D+ + A+ F Sbjct: 6 RLLVTGASGLLGGNVALALCRDWEVVGTYAAHPFSLAGTVSR-RLDIRSDGEVAALFADI 64 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P+V ++ AA T VD E P+ AF++NA G +A+AA + G +++STD V+ Sbjct: 65 RPEVTVHCAAETRVDACEARPDEAFAVNARAPGRLARAARAAGSLFVHVSTDAVY-APGG 123 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT---AWVYSIFGSNFLLSMLRLA 166 P E +PT P+N Y SKLAGEE VA +I+RT W S ++ RL Sbjct: 124 APHAESAPTGPVNAYAASKLAGEEAVAEAGGECLIVRTNLFGWSGRAKRSLAEWALARLE 183 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD-F 225 ++ D +P A +ARAI + RG+++ A AD Sbjct: 184 AGGEPLTGFTDAVFSPLLASDLARAIEALVR-------AGARGVYNAGA-------ADAV 229 Query: 226 AEYIFWESAERGGPYSK-VYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++Y F R Y + + R A RP + LD S+ A Sbjct: 230 SKYAFLRLLCREFGYPEDLVRPGRSGQTLAARRPGDTSLDSSRAA 274 >gi|212534970|ref|XP_002147641.1| NAD dependent epimerase/dehydratase family protein [Penicillium marneffei ATCC 18224] gi|210070040|gb|EEA24130.1| NAD dependent epimerase/dehydratase family protein [Penicillium marneffei ATCC 18224] Length = 315 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 15/196 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 +L P D P V+++ AA D E PE A IN E A+A+ +S GI Sbjct: 46 NLEDPADVKRILDEAKPQVVVHCAANRQPDACEKHPEQARKINVEATRALAEGTNSRGIL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF G P + + +P N+YG+ K GEE V T ++LR + Sbjct: 106 LIYISTDYVFAGREGEAPYETDAKPSPTNLYGEMKREGEEVVLEITKERGMGIVLRVPVL 165 Query: 151 YSIF------GSNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIEN 202 Y + N +L + +K+ ++ D + PT+ + R IA I++ Sbjct: 166 YGLTEYNGESAVNVILDAIAKSKD-ANANLKMDDWARRFPTNTQDVGRVCNDIAVRYIKD 224 Query: 203 SDT--SLRGIFHMTAD 216 SL I H +A+ Sbjct: 225 KHNIKSLPKILHFSAE 240 >gi|302791097|ref|XP_002977315.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii] gi|300154685|gb|EFJ21319.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii] Length = 309 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 18/265 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + LS P V++N AA + E+ P+ A ++N A A+ G Sbjct: 50 VDLTTGQGLQDLALSVHPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGA 109 Query: 94 P--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P ++ STD V++G+ + + E T P+N+YG SK+ E + S NY ILR++ +Y Sbjct: 110 PPLLVHFSTDQVYEGIKQFYV-ETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIY 168 Query: 152 SI-----FGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 + + +A RR + D++ P + + ++ + L E S Sbjct: 169 GPQPVVHVQKPLPVQWMDMALSARRPVDFFHDEYRCPIFIGDVVK-VVALLITLSEQSGG 227 Query: 206 SLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 +++ + ++ GGP +S A+ A+ + + +G S + ++ PA + Sbjct: 228 AMQLVLNL---GGPERLSRAEMAQVV---ARVKGYHPSLINQVPASSVDRGVASPADISM 281 Query: 264 DCSKLANTHNIRISTWKEGVRNILV 288 D KL +T I ++ + EGVR L+ Sbjct: 282 DVEKLRSTLGICLTPFDEGVRQTLM 306 >gi|300710893|ref|YP_003736707.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3] gi|299124576|gb|ADJ14915.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3] Length = 283 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 25/245 (10%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + A PDV+I+ AA T+V+ ED+P++A NA G + AA ++G Sbjct: 45 LDVRDGEAVARLVERVDPDVVIHSAAATSVEACEDDPKLAHGTNARGTKHVVDAATAVGA 104 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 IY ST YVF ++ P P+N YG+SKL GE V + + I+R V ++ Sbjct: 105 RVIYPSTAYVFGDGGPVHAEDDEPA-PMNRYGRSKLDGERYVQAASPENTIVRFCVVVNL 163 Query: 154 -------FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 FGS RL R + ++ DQ TPT ++ AI + + L+E+ Sbjct: 164 GPADSPDFGS---WVRGRLESGER-VRLIDDQEITPTV---LSDAIDALGY-LVEHETA- 214 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDC 265 G+FH+ + P + + E A R G + I + +A RP + CL Sbjct: 215 --GVFHVAS---PDRLTRYE--LGVEIARRHGLDPDLLEAIPIAEMDWQAPRPDHLCLGA 267 Query: 266 SKLAN 270 KL+ Sbjct: 268 EKLSQ 272 >gi|171693893|ref|XP_001911871.1| hypothetical protein [Podospora anserina S mat+] gi|170946895|emb|CAP73699.1| unnamed protein product [Podospora anserina S mat+] Length = 317 Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 15/198 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + P V+++ AA DK + +PE ++N E +A+ GI Sbjct: 46 VDLTNADELKKVLDDVKPQVVVHSAANRFPDKVDKDPEGTRALNVEAPRTLARLCAERGI 105 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEE------KVASYTNNYVILR 146 YISTDYVF G P + + P N+YG++KL GE K+A V+LR Sbjct: 106 LLTYISTDYVFPGKPGDAPYENNAEPAPTNLYGQTKLEGERAVLHEFKMAGKEGLGVVLR 165 Query: 147 TAWVYSIFGSN-------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +Y SN + S+L+ +E I++ PT+ I R + IA Sbjct: 166 VPVLYGSAKSNAESAVNVLMDSVLKAQQEGANINMDHWALRYPTNTEDIGRVLKDIAAKY 225 Query: 200 IENSD-TSLRGIFHMTAD 216 +E SD SL I +++ Sbjct: 226 LETSDRNSLPRILQFSSE 243 >gi|297625075|ref|YP_003706509.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297166255|gb|ADI15966.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 248 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 8/150 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +G++ + L + ++++ R ++DL +P A + P+V+++ AAYT Sbjct: 6 RILLTGGSGRLGRELQGL----LDLVAPPRSELDLTRPDTIAGALRRYRPEVVVHAAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V AE + + N G + +A + G P ++ISTDYVF G R E P P Sbjct: 62 DVRGAESDRRRCWETNVGGTRNLVRALLAAGHPRLVHISTDYVFYG-DRGHYHEDDPPGP 120 Query: 121 L-NIYGKSKLAGEEKVASYTNNYVILRTAW 149 + N Y SKL EE VA +++++RT++ Sbjct: 121 VRNHYALSKLVAEE-VARLAPHHLVIRTSF 149 >gi|330969754|gb|EGH69820.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 289 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 65/288 (22%), Positives = 109/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E + P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ N+L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPNLL 282 >gi|330899678|gb|EGH31097.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 292 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAER 236 PT +R II + L + + L G +H + A E + Sbjct: 181 NPTPVDDASRVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAI 238 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 ESPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 285 >gi|75909858|ref|YP_324154.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703583|gb|ABA23259.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413] Length = 294 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 37/285 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKPK-----DFASFFLSFS 50 K L+ G +G + L Q+ E+ + P I LLK + F Sbjct: 3 KLLITGASGFLGWHLCQAAQQEWEVYGTYCSHELSVPGIKLLKVNLTDFLELKQIFNEIK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + + P+ +++IN + +A+ + IP + S++ VFDG+ ++ Sbjct: 63 PDAVIHTAAQSQPNFCQIHPDESYTINVTASCNLAELCAAASIPYAFTSSELVFDGI-KS 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSMLR 164 P E P+NIYG+ K+ E + Y I + +FG+ +F+ ++ Sbjct: 122 PYKETDTVCPVNIYGEQKVLAEVGI---LERYPIATVCRMPLMFGNATPTAKSFIQPFIQ 178 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSW 222 K +E+++ D+F TP S A+ I+ ++GI H+ GG +S Sbjct: 179 TLKSGQELTLFIDEFRTPVSGTTAAKGILLALEK--------VKGIIHL---GGKERISR 227 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 DF +I E + P + + + A RPA LD S+ Sbjct: 228 YDFG-HILAEVFQL--PTAGIKACLQQDVNMAAPRPADVSLDSSQ 269 >gi|329939350|ref|ZP_08288686.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseoaurantiacus M045] gi|329301579|gb|EGG45473.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseoaurantiacus M045] Length = 296 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 5/145 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D + + FF + PDV ++ A V E +P++A ++N +A+A + Sbjct: 43 VDATRSTEVDRFFDAHRPDVCVHCVAAPDVAACERDPDMAHALNVRTTENVARACARQAV 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +Y+ST++VFDG S T E +PL +YG++KL GEE+ AS ++I+R +Y Sbjct: 103 RLVYLSTEFVFDGKSETGYAEDDVPHPLQMYGRTKLLGEER-ASEVPEHLIVRLPVLYGA 161 Query: 154 ----FGSNFLLSMLRLAKERREISV 174 G ++ ML E R + + Sbjct: 162 PVPGRGRGWIERMLLALSEGRTVEL 186 >gi|218283382|ref|ZP_03489409.1| hypothetical protein EUBIFOR_01998 [Eubacterium biforme DSM 3989] gi|218215904|gb|EEC89442.1| hypothetical protein EUBIFOR_01998 [Eubacterium biforme DSM 3989] Length = 290 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 1/151 (0%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NG IA + + + I + R D DL P+D F S D+ + AA Sbjct: 5 LVTGANGYIASLVRAYQKDNFNWICMTRKDADLTNPEDVKKFVASQDFDICFHTAANATT 64 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLN 122 + P++ IN E AI G I+ ST+ F+G P E P + + Sbjct: 65 AFCNEHPDLVHKINVESTQAIIDCCKEKGAKLIFCSTEQAFNGKENCGPFKEDEPLSAVT 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +YG++K+ EE + ++ +ILR W+ + Sbjct: 125 VYGQNKIECEELIQKQLDDAIILRFTWMMGL 155 >gi|71737452|ref|YP_276636.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298488876|ref|ZP_07006900.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558005|gb|AAZ37216.1| lipopolysaccharide biosynthesis protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156551|gb|EFH97647.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 294 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAER 236 PT AR II I L + + L G +H + A E Sbjct: 183 NPTPVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAI 240 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 241 ESPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|260832866|ref|XP_002611378.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae] gi|229296749|gb|EEN67388.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae] Length = 288 Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 23/243 (9%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P+++I+ AA D E + E ++N E +A+AA TDYVFDG S Sbjct: 59 FKPNILIHSAAQRRPDVVEKDEEATSALNVEATRTVAQAA----------RTDYVFDGKS 108 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLA 166 P P NPLN YG SKLAGE+ + +LR +Y + +++L A Sbjct: 109 -PPHKVTDPPNPLNKYGISKLAGEKVALEVAKDGAVLRVPILYGPVEAIDESAVTVLFGA 167 Query: 167 KERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + E + + PT IA Q+A ++ D SL G+FH + D + Sbjct: 168 VQNTEKTAKMSDYERRYPTHVDDIAAVCRQLAEKRLQ--DPSLHGVFHWSGD------EE 219 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +Y + + + K+ A RP + LD S+L + + ++E ++ Sbjct: 220 MTKYTMSIAMAEVFSLPSSHLVPDKEPSGGAPRPYNAQLDVSRLTDLGIGKTRPFRESIK 279 Query: 285 NIL 287 +L Sbjct: 280 EVL 282 >gi|67920275|ref|ZP_00513795.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH 8501] gi|67857759|gb|EAM52998.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH 8501] Length = 168 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 6/130 (4%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 +++ ++V +ID L+ + F PD +I+ AA + + ++ PE ++ IN + Sbjct: 39 KNINFVKVDVTNIDELQ-----TIFKQIKPDAVIHLAAASKPNYCQNNPEDSYKINVTAS 93 Query: 82 GAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 G IAK + IPC++ STD VFDGL+ E P +P++ YG+ K+ E+++ Sbjct: 94 GNIAKLCADVNIPCVFTSTDLVFDGLNPA-YKESDPVSPISYYGEQKVKAEQEMLIIYPK 152 Query: 142 YVILRTAWVY 151 VI R ++ Sbjct: 153 TVICRMPLMF 162 >gi|159026655|emb|CAO89003.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 292 Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 9/162 (5%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D +I++ D+ +K F PD +I+ AA + + ++ P+ + +IN + Sbjct: 40 DPNLIKINLTDLVAVK-----ELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL 94 Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IA+ IP ++ STD VFDG P E P +P+++YG+ K+A E+ + + Sbjct: 95 EIARLCSQYQIPLVFTSTDLVFDG-RNAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRA 153 Query: 143 VILRTAWVY---SIFGSNFLLSMLRLAKERREISVVCDQFGT 181 I R ++ S ++FL L+ +E +E+S+ D++ T Sbjct: 154 AICRMPLMFGSPSPSANSFLQPFLKTLQEGKELSLFTDEYRT 195 >gi|187923382|ref|YP_001895024.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187714576|gb|ACD15800.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 306 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L Q D +++ G+ +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRALVDELAQQSDWQVVATAFSRPAPGKVSLDIRDARAVEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + +A AA+ G + ISTDYVFDG + P Sbjct: 63 ALVIAAAERRPDVCEHDPALARALNVDAVRTLASAANRRGAWTLSISTDYVFDG-THPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG SKL GE + T+ +LR +Y Sbjct: 122 QHDSVPAPLNAYGHSKLEGEHALTESTDLGCVLRLPLLY 160 >gi|325276581|ref|ZP_08142324.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] gi|324098290|gb|EGB96393.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] Length = 289 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 116/295 (39%), Gaps = 24/295 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP P PD ++N A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIAFLAPRPPESGWTPASLTQLLDDHRPDALVNLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVSEPRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAKERREISVVCDQFGT 181 G++ E+ V + +V+LR W+ SI GS L L A++ E+ + D+ G Sbjct: 121 RGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGS--LGRFLTRAEQPAELLLADDRRGN 178 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT AR I+ + L + + L G +H + + I E+ + Sbjct: 179 PTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLV-LGQAILAEAGQ------ 229 Query: 242 KVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 YR Q PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 230 --YRQLAVQAPTAQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 282 >gi|302780343|ref|XP_002971946.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii] gi|300160245|gb|EFJ26863.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii] Length = 309 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 18/265 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + LS P V++N AA + E+ P+ A ++N A A+ G Sbjct: 50 VDLTTGQGLQDLALSVHPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGA 109 Query: 94 P--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P ++ STD V++G+ + + E T P+N+YG SK+ E + S NY ILR++ +Y Sbjct: 110 PPLLVHFSTDQVYEGIKQFYV-ETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIY 168 Query: 152 SI-----FGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 + + +A R+ + D++ P + + ++ + L E S Sbjct: 169 GPQPVVHVQKPLPVQWMDMALSARKPVDFFHDEYRCPIFIGDVVK-VVALLITLSEQSGG 227 Query: 206 SLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 +++ + ++ GGP +S A+ A+ + + +G S + ++ PA + Sbjct: 228 AMQLVLNL---GGPERLSRAEMAQVV---ARVKGYHPSLINQVPASSVDRGVASPADISM 281 Query: 264 DCSKLANTHNIRISTWKEGVRNILV 288 D KL +T I ++ + EGVR L+ Sbjct: 282 DVEKLRSTLGICLTPFDEGVRQTLM 306 >gi|213969269|ref|ZP_03397407.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] gi|301381773|ref|ZP_07230191.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato Max13] gi|302061027|ref|ZP_07252568.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato K40] gi|302130521|ref|ZP_07256511.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925947|gb|EEB59504.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] Length = 289 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|330877588|gb|EGH11737.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 289 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 108/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|186683883|ref|YP_001867079.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186466335|gb|ACC82136.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 290 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 38/305 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKP-----KDFASFFLSFS 50 K L+ G +G + L + + EI + P I LK ++ F Sbjct: 3 KLLITGASGFLGWHLCQLAKPEWEIYGTYLSHPLEIPGIKTLKANLTNFQELKRIFNDVK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P+ +I+ AA++ + + P+ + +IN + IA IPC + STD VFDGL+ Sbjct: 63 PEAVIHTAAHSQPNFCQTNPKESHAINVIASCNIAGLCADNSIPCAFTSTDLVFDGLN-A 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSMLR 164 P E P+N+YG+ K E A Y + + +FG+ +F+ ++ Sbjct: 122 PYQEIDAVCPVNLYGEQKAIAE---AGMLERYPLTAVCRMPLMFGAATPTAKSFIQPFIQ 178 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSW 222 + +E+++ D+F TP S A+ ++ + GI H+ GG +S Sbjct: 179 TLQAEKELNLFIDEFRTPVSGTTAAKGLLLALEK--------VNGIIHL---GGKERLSR 227 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 DF + I E + P +K+ + A RPA LD SK A + + KE Sbjct: 228 YDFGK-ILVEVFQL--PTTKLKSCRQEDVKMAAPRPADVSLDSSK-AFALGYQPLSLKEE 283 Query: 283 VRNIL 287 ++N++ Sbjct: 284 LQNLI 288 >gi|289619217|emb|CBI54485.1| unnamed protein product [Sordaria macrospora] Length = 337 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 18/201 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL K ++ +P V+++ AA DK + +PE +N E +AKA S GI Sbjct: 63 VDLEKAEEVERILEDVNPQVLVHCAANRFPDKVDADPEGTRLLNVEATRTLAKACASRGI 122 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILR 146 IYISTDYVF G P + + T P N+YG +KL GE+ V A V++R Sbjct: 123 LLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVMEEFSKAGKEGLGVVMR 182 Query: 147 TAWVYSIF--------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 +Y N LL + A+E +++ + PT+ + R +A Sbjct: 183 VPVLYGKTEEGRNEESAVNVLLDAVFKAQEGKKVKMDHWALRFPTNTEDVGRVARDVAVK 242 Query: 199 LIENSD---TSLRGIFHMTAD 216 + S +SL I M+++ Sbjct: 243 YLSTSGAERSSLPRILQMSSE 263 >gi|85103557|ref|XP_961543.1| hypothetical protein NCU01177 [Neurospora crassa OR74A] gi|18376291|emb|CAD21404.1| related to methionine adenosyltransferase regulatory beta subunit [Neurospora crassa] gi|28923090|gb|EAA32307.1| hypothetical protein NCU01177 [Neurospora crassa OR74A] Length = 338 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 18/201 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL K ++ SP V+++ AA DK + +PE +N E +A+A S GI Sbjct: 64 VDLEKAEEVERVLGDVSPQVLVHCAANRFPDKVDADPEGTRLLNVEATRTLARACASRGI 123 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILR 146 IYISTDYVF G P + + T P N+YG +KL GE+ V AS V++R Sbjct: 124 LLIYISTDYVFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKASKEGLGVVMR 183 Query: 147 TAWVYSIF--------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 +Y N LL + A+E +++ + P + + R +A Sbjct: 184 VPVLYGKTEEGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRVCRDVAVK 243 Query: 199 LIENSD---TSLRGIFHMTAD 216 + S+ TSL I + + Sbjct: 244 YLSTSEAERTSLPRILQFSGE 264 >gi|311697174|gb|ADQ00046.1| dTDP-4-dehydrorhamnose reductase [marine bacterium HP15] Length = 124 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 11/120 (9%) Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 +MLRLA+ + E+++V DQ G T A R I QI I + + G++H+ A G Sbjct: 3 TMLRLAESKTELNIVADQIGAATPA----RLIAQITALAIYSKLQA--GLYHLAATGE-T 55 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 SW FA+ IF G +KV I T YPT A RP S +D +KL NI++ W+ Sbjct: 56 SWQSFAKEIF----RLAGKSTKVNPIPTSDYPTPAQRPLNSRMDTTKLETALNIQLPNWQ 111 >gi|76262890|gb|ABA41505.1| dTDP-4-dehydrorhamnose reductase [Streptomyces hygroscopicus subsp. jinggangensis] Length = 324 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 33/247 (13%) Query: 2 KCLVIGNN---GQIAQSLSSMCVQDVEIIR----------VGRPDIDLLKPKDFASFFLS 48 + L++G+ G IA L+ + + V R V +D+ A+ + Sbjct: 34 RILILGSGYLAGHIAARLTRLGAETVLSSRRAPVLPESRGVRWKQVDVTSGPQVAALMDA 93 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD ++ + + E PE A++ + GA IA A D G P + +STD VF G Sbjct: 94 VEPDAVVAVHGPSDITWCESHPEEAYATHHGGARNIAAALD--GRPVLLVSTDNVFSGED 151 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLR 164 + E + T P+N YG++KLA E ++ T++ ++LR + VY NFL S++R Sbjct: 152 ES-YGESAQTFPVNAYGRAKLAAERELLD-TSSALVLRVSLVYGWEDRGPRPNFLTSVVR 209 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSW 222 + ++ + D + TP +A A L+ + T G H+ GGP + Sbjct: 210 SLMRKEQLRIPDDHWNTPVHVEDVA----AWATTLMSSGRT---GTLHL---GGPRRIGR 259 Query: 223 ADFAEYI 229 D+A +I Sbjct: 260 VDWARHI 266 >gi|84872457|gb|ABC67268.1| VldD [Streptomyces hygroscopicus subsp. limoneus] Length = 294 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 33/247 (13%) Query: 2 KCLVIGNN---GQIAQSLSSMCVQDVEIIR----------VGRPDIDLLKPKDFASFFLS 48 + L++G+ G IA L+ + + V R V +D+ A+ + Sbjct: 4 RILILGSGYLAGHIAARLTRLGAETVLSSRRAPVLPESRGVRWKQVDVTSGPQVAALMDA 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD ++ + + E PE A++ + GA IA A D G P + +STD VF G Sbjct: 64 VEPDAVVAVHGPSDITWCESHPEEAYATHHGGARNIAAALD--GRPVLLVSTDNVFSGED 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLR 164 + E + T P+N YG++KLA E ++ T++ ++LR + VY NFL S++R Sbjct: 122 ES-YGESAQTFPVNAYGRAKLAAERELLD-TSSALVLRVSLVYGWEDRGPRPNFLTSVVR 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSW 222 + ++ + D + TP +A A L+ + T G H+ GGP + Sbjct: 180 SLMRKEQLRIPDDHWNTPVHVEDVA----AWATTLMSSGRT---GTLHL---GGPRRIGR 229 Query: 223 ADFAEYI 229 D+A +I Sbjct: 230 VDWARHI 236 >gi|91782662|ref|YP_557868.1| NAD dependent epimerase/dehydratase [Burkholderia xenovorans LB400] gi|91686616|gb|ABE29816.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] Length = 306 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPD-----IDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L+ Q V RP +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRALADELAQQPGWQVAATAFSRPAPGRIALDIRDAQAVEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + +A AA+ G + ISTDYVFDG + P Sbjct: 63 ALVIAAAERRPDVCEHDPALARALNVDAVRTLAAAANRRGAWTLSISTDYVFDG-THPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG SKL GE + T+ +LR +Y Sbjct: 122 QHDSVPAPLNAYGHSKLEGERALTESTDLGCVLRLPLLY 160 >gi|302039637|ref|YP_003799959.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] gi|300607701|emb|CBK44034.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] Length = 290 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 10/199 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G G I L S + + V R + D+ P + +P ++I+ AA Sbjct: 6 LITGAGGLIGGYLVSTAARWAPQWNVHGVTRAETDVTDPMQVQELWRRSTPALVIHCAAL 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + E +P A IN E +A A I P I++STD VFDG ++ E +P Sbjct: 66 SRTGACEQDPARARRINVEATERLAGLARDI--PFIFLSTDQVFDG-TKGWYVESDAVHP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILR---TAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 LN+YG++K A E+V + I+R TA +F+ MLR A + ++++ D Sbjct: 123 LNVYGQTK-ADAEQVVLENPAHSIVRIALTAGTSPTHDRSFVEDMLRAAAKGTKLTLFTD 181 Query: 178 QFGTPTSALQIARAIIQIA 196 ++ P A + RA+ + A Sbjct: 182 EYRCPIPAGPLVRALWEFA 200 >gi|321251986|ref|XP_003192247.1| hypothetical protein CGB_B5250W [Cryptococcus gattii WM276] gi|317458715|gb|ADV20460.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 303 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 27/181 (14%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL+ + +FF + + D +++ AA D AE +PE A INA +A A G Sbjct: 47 LDLMDQETVKNFFKTNNIDFVVHCAAERRPDVAEADPEKAAKINAAVPAQLAALAREQGF 106 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTN---NYVILRTAW 149 IYISTDYVF+G R P E + T +PL +YG+ KL GE+ V + +LR Sbjct: 107 TLIYISTDYVFNG--RNPPYEVNDTPDPLQMYGRQKLDGEKAVLAEHEKGAKVTVLRIPI 164 Query: 150 VY--SIFGSNFLLSMLRLAKERREISVVCDQFGT-----------PTSALQIARAIIQIA 196 +Y + + + +++LR VV DQ G PT+ I R + +A Sbjct: 165 LYGRTEYNAESAVNVLR--------DVVEDQSGKTYKMDARQTRFPTNVEDIGRVLYDLA 216 Query: 197 H 197 H Sbjct: 217 H 217 >gi|330940959|gb|EGH43900.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976707|gb|EGH76748.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 289 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E + P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|289675565|ref|ZP_06496455.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 289 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 109/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDDPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E + P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|331245354|ref|XP_003335314.1| hypothetical protein PGTG_17094 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314304|gb|EFP90895.1| hypothetical protein PGTG_17094 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 309 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 G +DL ++ PDV+I+ AA D AE +PE +N +A+ ++ Sbjct: 42 GLEKVDLRDENLVSTLVHKLKPDVLIHCAAERRPDVAEGDPEGTQKLNVRVTEHLAELSN 101 Query: 90 SIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVA-SYTN--NYVIL 145 IG IYI TDYVFDG + + D + NP N YGK+KLAGE+ + + TN N V L Sbjct: 102 QIGFKMIYICTDYVFDGNAPSGGYDVEATPNPTNFYGKTKLAGEQAMLNTVTNRGNAVSL 161 Query: 146 RTAWVY------SIFGSNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIA 196 R +Y S N LL ++ A ++ V+ D + T PT +A+ ++ +A Sbjct: 162 RVPVLYGKAENNSESAINVLLDGVKKAAVGQK--VLMDDWATRFPTLVDDVAKVLVALA 218 >gi|223937614|ref|ZP_03629517.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] gi|223893777|gb|EEF60235.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] Length = 282 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%) Query: 5 VIGNNGQIAQSL---SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + G NG I + S++ + + + RPD DL + + F P ++I+ AA + Sbjct: 6 ITGANGLIGNYILRTSALYAKGWDARGITRPDFDLCEFEAVKRAFTEQKPQLVIHCAALS 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + P +A +N E +A A++I P ++ STD VFDG + DE + NPL Sbjct: 66 KSPACQANPLLARKVNIEVTKHLAGLAENI--PFLFFSTDLVFDGRAGN-YDEAAAVNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-------NFLLSMLRLAKERREISV 174 ++Y ++K+A EE V N+ VI RT S+ G F M R + + +++ Sbjct: 123 SVYAETKVAAEEFVLGNPNHTVI-RT----SLNGGTSPTGDRGFNEEMRRAWQAGKTLNL 177 Query: 175 VCDQFGTPTSALQIARAIIQI 195 D+ +P A+ ARA+ ++ Sbjct: 178 FTDELRSPIPAIITARAVWEL 198 >gi|303319489|ref|XP_003069744.1| RmlD substrate binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109430|gb|EER27599.1| RmlD substrate binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 309 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 21/171 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-------PDI---DLLKPKDFASFFLSFS 50 K LV G +G + + + + +DV VG+ P I DL P + S Sbjct: 3 QKALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPHIVKADLTNPSEIESLLAEVK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SR 109 P V+++ + + P++A +N E A+AKA I IYISTDYVF G Sbjct: 63 PQVVVH-------YQCDAHPDLARKVNVEATKALAKATLQRSILLIYISTDYVFPGRPGE 115 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSN 157 P + S T P NIYG++KL GE V T V+LR +Y +N Sbjct: 116 APYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLYGSADTN 166 >gi|320586902|gb|EFW99565.1| NAD dependent epimerase dehydratase family protein [Grosmannia clavigera kw1407] Length = 322 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 21/203 (10%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++L + S PDV+++ AA DK E++PE +N E + +A+ S GI Sbjct: 48 VNLENSTEVKSALDEVKPDVVVHCAANRFPDKVENDPEGTRRLNIEASRKLAQLCASRGI 107 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----------N 141 IYISTDYVF G P + + P N+YG++KL GE V N + Sbjct: 108 TLIYISTDYVFPGKPGEAPYEVEAAPAPTNLYGQTKLDGERAVLGVYNEAQQLEKTKKGH 167 Query: 142 YVILRTAWVYSIFGS------NFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAII 193 VILR +Y N L+ ++ + ++V D + PT+ +AR + Sbjct: 168 AVILRVPVLYGRVEKPAESAINVLMDIVNKVQA-EGVTVKMDDWSIRYPTNTEDVARVLK 226 Query: 194 QIAHNLIENSDTSLRGIFHMTAD 216 IA E D L + +++ Sbjct: 227 DIATKYTEAVDADLPPVLQFSSE 249 >gi|209520653|ref|ZP_03269406.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] gi|209498936|gb|EDZ99038.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] Length = 307 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD-----IDLLKPKDFASFFLSFSPD 52 K +VIG +G + ++L+ + + RP +D+ F PD Sbjct: 3 KVVVIGGSGLLGRALNDELARHDGWQIVTTAFSRPSRQMVALDVRDSLAVERFIEHVKPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + IA+AA+ G + ISTDYVFDG + P Sbjct: 63 AVVIAAAERRPDVCERDPALARALNVDAVRTIARAANRHGAWTLSISTDYVFDG-THPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG+SKL GE + + +LR +Y Sbjct: 122 RHDSTPAPLNAYGQSKLEGERALIETADRGCVLRLPLLY 160 >gi|83643162|ref|YP_431597.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] gi|83631205|gb|ABC27172.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] Length = 300 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF---------------F 46 + LV G +G + + QD E++ + P+D A F F Sbjct: 12 RVLVTGASGFLGAHICRALNQDYEVLAQSH---QVTLPEDLAPFRVRQDLCDAELTQAMF 68 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + +PD +I+ AA + + + +PE + +N E +A IP ++ STD VFDG Sbjct: 69 RNLTPDAVIHAAALSDPNTCQQQPERSLQVNVEATRLLAALCAERDIPLLFTSTDLVFDG 128 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + E P NP+N YG+ K E+ + I+R W++ + Sbjct: 129 -RQGVYRESDPVNPINRYGEHKAMAEKLIREQHPRATIVRMPWMFGL 174 >gi|58263484|ref|XP_569152.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134108330|ref|XP_777116.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259801|gb|EAL22469.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223802|gb|AAW41845.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 303 Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 27/181 (14%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL+ + +FF S D +++ AA D AE +PE A INA +A A G Sbjct: 47 LDLMDQEAVKNFFGSNDIDFVVHCAAERRPDVAEADPEKAAKINAAVPAQLASLAKEQGF 106 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTN---NYVILRTAW 149 IYISTDYVF+G R P E + T +PL +YG+ KL GE+ V + +LR Sbjct: 107 TLIYISTDYVFNG--RNPPYEVNDTPDPLQMYGRQKLDGEKAVLAEHEKGAKVSVLRIPV 164 Query: 150 VY--SIFGSNFLLSMLRLAKERREISVVCDQFGT-----------PTSALQIARAIIQIA 196 +Y + + + +++LR VV DQ G PT+ I R + +A Sbjct: 165 LYGRTEYNAESAVNILR--------DVVEDQSGKTYKMDARQVRFPTNVEDIGRVLYDLA 216 Query: 197 H 197 H Sbjct: 217 H 217 >gi|19705006|ref|NP_602501.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712914|gb|AAL93800.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 292 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 36/287 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD------------IDLLKPKDFASFFLS 48 K L++G+ G + L +Q+ ++I + + + IDLL Sbjct: 3 KVLILGSCGMLGSVLCEYLLQNNYQVIGIDKINLENKFEKYKLYNIDLLDFFKVEEVIFQ 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P++IIN AA ++ E+ E+A ++ + + I IYISTD VFDG Sbjct: 63 EKPNIIINAAAIVNLNLCEENYELAELLHVDLNEQFLNLSKKISFKFIYISTDSVFDGTK 122 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLA- 166 I+E PLN Y K+K GEE+V +Y+++RT +I+G S+ S+L+ A Sbjct: 123 SNYIEE-DLAIPLNNYAKTKFLGEEEVKK-MEDYIVIRT----NIYGYSDRQNSLLKWAY 176 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + ++I + P S Q+A AI+ + + +GI ++ +D P+S Sbjct: 177 DELNKNKKIYGYKNVIFNPVSIYQLADAILILIQ-------KNFKGILNIVSD-KPISKF 228 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +F + I E + V + + RP + L K+ N Sbjct: 229 EFLKII----EEYLKKKNLVQESVLEDENSNLKRPKNTALSIKKMEN 271 >gi|331018213|gb|EGH98269.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 289 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I S+ VFDG T E PL + Sbjct: 61 FQAESVSEARLTHQERSVERLAELCQHHNITLFQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|146308889|ref|YP_001189354.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145577090|gb|ABP86622.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 294 Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 24/298 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPK------DFASF---FLSFS 50 M+ +++G + +L IR+G DI L P+ D AS Sbjct: 3 MRLMLLGGGSALGHAL----------IRLGAEEDIGFLAPRPPESGWDAASLTELLDETR 52 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD ++N A Y +AE E +A+ GI + S+ VFDG T Sbjct: 53 PDALVNLAYYFDWFQAESVAESRLQTQERAVERLAELCQHHGIVLLQPSSYRVFDGSRAT 112 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E PL + G++ E+ V + +V+LR W+ L L+ A+ Sbjct: 113 AYSEKEEPVPLGLRGQALWRLEQSVRAICPRHVLLRFGWLLDDSREGLLGRFLQRAERDD 172 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + + D+ G PT AR I+ + L + ++ L G +H S + + + Sbjct: 173 ALYLADDRRGNPTPVDDAARVILAVLKQL--DCESPLWGTYHYGGHEASTSLS-LGQAVL 229 Query: 231 WESAE-RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E+ R + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 230 SEARHYRSNLVEDIAPQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|255523732|ref|ZP_05390698.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|296186736|ref|ZP_06855138.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|255512601|gb|EET88875.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|296048773|gb|EFG88205.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] Length = 300 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 31/304 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRP-DIDLLKPKDFASFFLSF--------- 49 K L+ G+NG + + L+S+ ++ E+ + R DI+L F F Sbjct: 6 KILITGSNGMLGKDLTSLFSKNDNFEVFGINRSNDINLKDDHYFVCDITDFEELNNILKY 65 Query: 50 -SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P++II+ AA VD E + A+ +N+E I + S IYISTD +F+G Sbjct: 66 INPEIIIHCAANVNVDGCEKDKNYAYKLNSEST-KILSSYKSEKTKFIYISTDSIFNG-E 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRL 165 E NPLN Y SK GE N +I+RT +Y +GS+ + L+ Sbjct: 124 TGNYKEDDKANPLNYYAFSKFEGENFALLQNKNAIIIRTN-IYGFHKPYGSSLVEWALKN 182 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K +IS D + P Q+ + ++++ +GI H G ++ + Sbjct: 183 LKSENKISGFNDVYFNPIYTGQLGKIVMKLIQ-------IDYKGIIHT----GCENFINK 231 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 E++ + + G + A RP + L+ +KL + I T ++G+ Sbjct: 232 YEFLIRIAQKFGLNNELIDESSVDSINFSARRPKNTTLNITKLKGLIDFTI-TLEDGLNQ 290 Query: 286 ILVN 289 + ++ Sbjct: 291 LYMD 294 >gi|260836799|ref|XP_002613393.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae] gi|229298778|gb|EEN69402.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae] Length = 493 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 36/238 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVG----RPDIDLL--------KPKDFASFFLSF 49 L+IG +GQ+ +L ++ EI+ +G P ++ + +D L+ Sbjct: 189 LIIGASGQVGGALMEALLRHRSKEIVAIGTCNSNPREGMIPFCLEEAGRSEDACRDLLTM 248 Query: 50 -SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 P V+ AA+T D E EPE A +N +A+ A I ++ STDYVF G Sbjct: 249 VRPSVVFICAAFTWTDGCEREPEKAQLVNCTAVVNLAQCAKVINSKVVFYSTDYVFPGSD 308 Query: 108 -SRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNF--- 158 TP E P PL YG++K E+K+ + +ILRT+ V+ G NF Sbjct: 309 GDDTPGGGYSESCPCRPLQTYGETKYRAEQKLLTVHPQALILRTSTVFGPEEQGKNFVYQ 368 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L+S + K+ +V C TPT +A ++ LIEN GI+H+ D Sbjct: 369 LVSNVTSGKDMALTNVKC----TPTYNRDLAAMTLK----LIEN---GCSGIYHVIGD 415 >gi|330953141|gb|EGH53401.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae Cit 7] Length = 289 Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 108/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E + P Sbjct: 181 PVDDAARGIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAGEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|237797498|ref|ZP_04585959.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020348|gb|EGI00405.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 289 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 6/286 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAEVVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE EI + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGEILLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES--AERGGPYS 241 AR +I + L + + L G +H A + + E+ A S Sbjct: 181 PVDDAARVLISVVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARIAHPLAIES 237 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 PTAQAHAAR-PDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|67902090|ref|XP_681301.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4] gi|40740464|gb|EAA59654.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4] gi|259480783|tpe|CBF73741.1| TPA: NAD dependent epimerase/dehydratase family protein (AFU_orthologue; AFUA_5G02240) [Aspergillus nidulans FGSC A4] Length = 314 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP D P ++I+ AA + D + +PE A +N + +A+ I Sbjct: 46 DLEKPDDIKGLLDEAKPQIVIHCAANRSPDLCDKDPERARRVNVDATRTLAELTAERNIL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G+ P + +PT P N+YG+ K GE+ V T +ILR + Sbjct: 106 LVYISTDYVFPGVEGEAPYEADAPTKPPNLYGELKRDGEQVVLEATKKSGMGIILRVPVL 165 Query: 151 YSIFGSN 157 Y N Sbjct: 166 YGTANEN 172 >gi|295099497|emb|CBK88586.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cylindroides T2-87] Length = 260 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 1/126 (0%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 + R D DL KP++ +F D+ + AA E+ PE+A IN E I +A Sbjct: 1 MTRKDADLSKPEEVEAFLKDKQFDICFHTAANATTAVCEENPELAHKINVESTQKIIEAC 60 Query: 89 DSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 I+ ST+ VF+G + P +E + + +YGK+K+ E+ + ++Y+ILR Sbjct: 61 KKNQARLIFCSTEQVFNGKENHGPFNEEESVSAVTVYGKNKIECEDLIHEQLDDYLILRF 120 Query: 148 AWVYSI 153 +W+ + Sbjct: 121 SWMMGL 126 >gi|226357047|ref|YP_002786787.1| dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] gi|226319037|gb|ACO47033.1| putative dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] Length = 250 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ P+VI++ AAYT V AE++ E + +N EG +A+AA+ +G Sbjct: 33 ELDVTNSAQVLEMVWCKRPEVIVHAAAYTNVGGAEEDRETCWRVNVEGTRHMAQAANEVG 92 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 + ISTDYVF G + P P+N Y +KL EE A ++I+RT++ Sbjct: 93 AKLVQISTDYVFSGAQGDYRETDIPGPPVNYYALTKLVAEE-AARTAGQHLIVRTSF 148 >gi|289628406|ref|ZP_06461360.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647751|ref|ZP_06479094.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 2250] gi|320322814|gb|EFW78907.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. B076] gi|320330400|gb|EFW86379.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869894|gb|EGH04603.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988234|gb|EGH86337.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 289 Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II I L + + L G +H + A E P Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|302189336|ref|ZP_07266009.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae 642] Length = 289 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDDPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AK+ E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKDPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II + L + + L G +H + A E + P Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHALAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|330874086|gb|EGH08235.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 289 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 107/288 (37%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVGSLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II I L + + L G +H + A E P Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|115437410|ref|XP_001217803.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188618|gb|EAU30318.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1018 Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP D + P ++++ AA + D + +P+ A +N + A+AK + Sbjct: 750 DLEKPDDIHALLDDVKPQIVVHCAANRSPDLCDKDPDQARRLNVDATRALAKETVARNAF 809 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF G P + SPTNP N+YG+ K GE V T + ++LR + Sbjct: 810 LIYISTDYVFPGKEGEAPYEVDSPTNPPNLYGQLKRDGEIAVLEETKDTGLGIVLRVPVL 869 Query: 151 YSIFGSN 157 Y SN Sbjct: 870 YGPAKSN 876 >gi|239626739|ref|ZP_04669770.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516885|gb|EEQ56751.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 295 Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G NG + LS + E + V ++++ ++F + PD +++ A Sbjct: 4 RILITGANGFLGSRLSEYFRKIDGYETLGVSHRELEVSDSLAVSAFIKAIRPDYVLHCAG 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPT 118 + E EPE + IN G +AKA G +++S+D +++ S P E P Sbjct: 64 VSNTAACEKEPERSEQINVRGTSNMAKACRQSGSRMVFMSSDQIYNASDSMEPNREEGPH 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P ++YG+ K EE + + ++ V LR W+Y Sbjct: 124 RPCSVYGRDKKRAEEAMLTCLHDAVALRLTWMY 156 >gi|294055959|ref|YP_003549617.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM 45221] gi|293615292|gb|ADE55447.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM 45221] Length = 301 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 41/283 (14%) Query: 1 MKCLVIGNNGQIAQSL---------------SSMCVQDVEIIRVGRPDIDLLKPKDFASF 45 MK LV G G + + S VQ ++R ID + Sbjct: 1 MKILVTGATGLLGNAYLDAATRRSHELIALSHSQVVQHPAVVR--NEQIDGTDLDSLTAL 58 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 L PDVI+N AA + + P++A IN +A+ + +G ++ISTD VFD Sbjct: 59 CLEIWPDVIVNCAAISNPASVDANPQLAEKINVALPRHLAQISTHLGARLLHISTDMVFD 118 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWVY--SIFGSNFLLSM 162 G S P ++YG++KL E +V + + + V+LR + S G+ L Sbjct: 119 GHSAEAYRSTDMPCPTSLYGQTKLMAEREVLEHNSEDPVVLRIPILMGNSPSGARSLHEK 178 Query: 163 LRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L A + E + CD+ P SA +A +++++ E D L GIFH Sbjct: 179 LFAAIRKGERPKLFCDEIRQPCSAGNVADVLVELS----ERRD--LHGIFH--------- 223 Query: 222 WADFAEYIFWESAER-----GGPYSKVYRIFTKQYPTKAHRPA 259 WA +E +R P V + P A+RP+ Sbjct: 224 WAGNEALSRFEIGQRILKHFDLPLDMVESVVKGDNPDFANRPS 266 >gi|210633745|ref|ZP_03297848.1| hypothetical protein COLSTE_01765 [Collinsella stercoris DSM 13279] gi|210159090|gb|EEA90061.1| hypothetical protein COLSTE_01765 [Collinsella stercoris DSM 13279] Length = 184 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 24/180 (13%) Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA------- 166 E P +PL++YG+SK AG+ VA +Y I+R++WV G NF+ +M L+ Sbjct: 6 EDEPLSPLSVYGQSKAAGDLAVAGCPRHY-IMRSSWVIG-EGCNFVKTMKSLSDRVADSE 63 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + +I+VV DQ G T +A+AI + + G ++ + G SWAD A Sbjct: 64 DKLDKITVVDDQLGRLTFTRDMAQAIFHLLGT------HASYGTYNCSGSGAVKSWADIA 117 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKE 281 +F E+A G +V T Y A RP +S LD S+L T R+ W+E Sbjct: 118 RAVF-EAANGNG--DRVVPASTADYYASAAGPIAPRPVHSALDLSRL-ETVGFRMPDWEE 173 >gi|255955515|ref|XP_002568510.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590221|emb|CAP96395.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255] Length = 314 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K +D F P ++I+ AA + D E +P+ A +N E +AK + G Sbjct: 46 DLEKEEDIRMLFDEIKPQIVIHCAANKSPDLCEKDPDQARRVNVEATRTLAKECQARGAF 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF G P + S T P N+YG+ K GE V T + ++LR + Sbjct: 106 LIYISTDYVFPGTEGEAPYESDSETKPPNLYGQLKRDGEVAVLEATKDSGMGIVLRVPVL 165 Query: 151 YSIFGSN 157 Y N Sbjct: 166 YGSAKEN 172 >gi|330888068|gb|EGH20729.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. mori str. 301020] Length = 289 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 106/288 (36%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRPTCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II I L + + L G +H + A E P Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|15599264|ref|NP_252758.1| hypothetical protein PA4069 [Pseudomonas aeruginosa PAO1] gi|116052105|ref|YP_789051.1| hypothetical protein PA14_11250 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889650|ref|YP_002438514.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa LESB58] gi|254236957|ref|ZP_04930280.1| hypothetical protein PACG_02981 [Pseudomonas aeruginosa C3719] gi|9950267|gb|AAG07456.1|AE004823_2 hypothetical protein PA4069 [Pseudomonas aeruginosa PAO1] gi|115587326|gb|ABJ13341.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126168888|gb|EAZ54399.1| hypothetical protein PACG_02981 [Pseudomonas aeruginosa C3719] gi|218769873|emb|CAW25634.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa LESB58] Length = 294 Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 120/303 (39%), Gaps = 34/303 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-------IYISTDYVFDGLSRTPID 113 +AE + AE GA +A + + C + S+ VFDG T Sbjct: 63 HDWFQAE-------QVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYS 115 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PL + G++ E+ V + +V++R W+ + L L A++ + + Sbjct: 116 EKDETLPLGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLF 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + D+ G PT AR ++ + L + L G +H + A + I E Sbjct: 176 LADDRRGNPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNE- 231 Query: 234 AERGGPYSKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ YR Q P+ +AH P ++ + C K+ +T I+ W+ G+ Sbjct: 232 -------ARTYRSNLIQEPSAEAHAARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLP 284 Query: 285 NIL 287 +L Sbjct: 285 ALL 287 >gi|107103583|ref|ZP_01367501.1| hypothetical protein PaerPA_01004653 [Pseudomonas aeruginosa PACS2] gi|296387374|ref|ZP_06876873.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAb1] gi|313109510|ref|ZP_07795465.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa 39016] gi|310881967|gb|EFQ40561.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa 39016] Length = 292 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 120/303 (39%), Gaps = 34/303 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-------IYISTDYVFDGLSRTPID 113 +AE + AE GA +A + + C + S+ VFDG T Sbjct: 61 HDWFQAE-------QVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYS 113 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PL + G++ E+ V + +V++R W+ + L L A++ + + Sbjct: 114 EKDETLPLGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLF 173 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + D+ G PT AR ++ + L + L G +H + A + I E Sbjct: 174 LADDRRGNPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNE- 229 Query: 234 AERGGPYSKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ YR Q P+ +AH P ++ + C K+ +T I+ W+ G+ Sbjct: 230 -------ARTYRSNLIQEPSAEAHAARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLP 282 Query: 285 NIL 287 +L Sbjct: 283 ALL 285 >gi|166366805|ref|YP_001659078.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis aeruginosa NIES-843] gi|166089178|dbj|BAG03886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis aeruginosa NIES-843] Length = 292 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 9/162 (5%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D +I++ D+ ++ F PD +I+ AA + + ++ P+ + +IN + Sbjct: 40 DPNLIKINLTDLAAVR-----ELFQQIKPDAVIHGAAQSKPNLCQEFPQASEAINLTASL 94 Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IA+ IP ++ STD VFDG P E +P+++YG+ K+A E+ + + Sbjct: 95 EIARLCSQYQIPLVFTSTDLVFDG-KNAPYSENDTVSPVSVYGEQKVAAEKGILAIYPRA 153 Query: 143 VILRTAWVY---SIFGSNFLLSMLRLAKERREISVVCDQFGT 181 I R ++ S ++FL L+ +E +E+S+ D++ T Sbjct: 154 AICRMPLMFGSPSPTANSFLQPFLKTLQEGKELSLFTDEYRT 195 >gi|225163945|ref|ZP_03726235.1| dTDP-4-dehydrorhamnose reductase [Opitutaceae bacterium TAV2] gi|224801438|gb|EEG19744.1| dTDP-4-dehydrorhamnose reductase [Opitutaceae bacterium TAV2] Length = 314 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL +P + L PD I+N AA + E +P ++ +N E +A+ A + Sbjct: 52 LDLAEPGAVTTVALDLFPDAIVNCAAIAEPARCEADPVLSQRLNVELPLELARVAHHMSA 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 I++S++ VFDG +R P SP +P+N+YG+ KL E V + + A + Sbjct: 112 RFIHVSSEQVFDG-TRPPYAIGSPPSPINLYGRQKLESERAVTHAAPEFAAVVRAPLLTG 170 Query: 152 -SIFGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 S+ G+ L L R + D+F P +A +A ++++ ++RG Sbjct: 171 NSLTGTRSLHEKLFADWAAGRAPRLFADEFRQPCTAENLAEVLLELCER------PAMRG 224 Query: 210 IFH 212 ++H Sbjct: 225 VYH 227 >gi|325957478|ref|YP_004292890.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus acidophilus 30SC] gi|325334043|gb|ADZ07951.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus acidophilus 30SC] Length = 138 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 27/140 (19%) Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 +R AWV+ + GSNF+ +ML++ E+ VV DQ GTPT L +A ++ ++IE Sbjct: 1 MRIAWVFGVNGSNFIKTMLKVGSTHDEVKVVDDQIGTPTYTLDLACLLV----DMIE--- 53 Query: 205 TSLRGIFHM-------TADG--------GPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 T G +H TA G G +SW DF + I+ + G +KV + T Sbjct: 54 TDKYGYYHATNSELPDTASGYDENGTKTGYISWYDFTKEIY----RQAGYDTKVTPVTTA 109 Query: 250 QYP-TKAHRPAYSCLDCSKL 268 +Y +KA RP S LD SKL Sbjct: 110 EYGLSKAVRPFNSRLDKSKL 129 >gi|254242751|ref|ZP_04936073.1| hypothetical protein PA2G_03516 [Pseudomonas aeruginosa 2192] gi|126196129|gb|EAZ60192.1| hypothetical protein PA2G_03516 [Pseudomonas aeruginosa 2192] Length = 294 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 34/303 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-------IYISTDYVFDGLSRTPID 113 +AE + AE GA +A + + C + S+ VFDG T Sbjct: 63 HDWFQAE-------QVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYS 115 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T PL + G++ E+ V + +V++R W+ + L L A+ + + Sbjct: 116 EKDETLPLGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEHPQPLF 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + D+ G PT AR ++ + L + L G +H + A + I E Sbjct: 176 LADDRRGNPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNE- 231 Query: 234 AERGGPYSKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ YR Q P+ +AH P ++ + C K+ +T I+ W+ G+ Sbjct: 232 -------ARTYRSNLIQEPSAEAHAARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLP 284 Query: 285 NIL 287 +L Sbjct: 285 ALL 287 >gi|330812026|ref|YP_004356488.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380134|gb|AEA71484.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 289 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 108/291 (37%), Gaps = 16/291 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPEDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAEAVSEQRLASQERAVERLAELCQHHNIVLLQPSSYRVFDGSRATAYSEKDEPVPLGV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L A++ E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLLRFGWLLDDSADGILGRFLARAEQPEELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA-------ER 236 AR II + L + L G +H A + I E+ E Sbjct: 181 PVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTEARALHPLAIES 237 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + R P A P ++ L C K+ +T I+ W+ + ++L Sbjct: 238 PTPQAHAAR------PDAAEEPQHAVLACKKILHTFGIKPRAWRAALPSLL 282 >gi|15898580|ref|NP_343185.1| dTDP-4-dehydrorhamnose reductase (rfbD-2) [Sulfolobus solfataricus P2] gi|13815029|gb|AAK41975.1| dTDP-4-dehydrorhamnose reductase (rfbD-2) [Sulfolobus solfataricus P2] Length = 207 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 12/156 (7%) Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDK E E + A+ IN++ I +A + I+ISTDYVFDG ++ E + NP Sbjct: 2 TDVDKCEIEKDKAYKINSQAVKHIVRAGRVVDSYVIHISTDYVFDG-NKGNYKEDNIPNP 60 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE +SY + +I+RT+ V+ G F + + + KE + + + + Sbjct: 61 INYYGLSKLLGEIFASSYDES-LIIRTSGVFRNKG--FPIYVYKTLKEGKTV-LAFKGYY 116 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 +P SA ++A AI ++ D GI H+ + Sbjct: 117 SPISARKLALAIDELL-------DLRKTGIIHVAGE 145 >gi|330505173|ref|YP_004382042.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] gi|328919459|gb|AEB60290.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] Length = 289 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/285 (21%), Positives = 108/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MLLGGGSALGQALIRLGAEEDIGFLAPRPPEEGWDAASLTELLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVAESRLQTQERAVERLAELCQHHSIVLLQPSSYRVFDGSRVTAYSEKEEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L+ A+ + + D+ G PT Sbjct: 121 RGQALWRLEQSVRAICPRHVLLRFGWLLDDSREGLLGRFLQRAERDDALYLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPYSK 242 AR I+ + L + ++ L G +H S + + + E+ R Sbjct: 181 PVDDAARVILAVLKQL--DCESPLWGTYHYGGHEASTSLS-LGQAVLSEARHYRSNLVED 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 VAPQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRSGLPSLL 282 >gi|77461252|ref|YP_350759.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] gi|77385255|gb|ABA76768.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] Length = 294 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEDGWDAASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAEAVSESRLAGQERAIERLAELCQHHNIVLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSPEGILGRFLARAEQPEELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PT AR II + L + L G +H A + I E+ Sbjct: 183 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILSEARSLHPLA 239 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ + +L Sbjct: 240 IEAPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAALPGLL 287 >gi|331012475|gb|EGH92531.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 289 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/288 (22%), Positives = 106/288 (36%), Gaps = 10/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAERGGP 239 AR II I L + + L G +H + A E P Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLAIESP 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + P A P ++ L C K +T I+ W+ G+ ++L Sbjct: 239 TAQAH----AARPDAAEEPQHAVLACKKNLHTFGIKPRAWRAGLPSLL 282 >gi|256376132|ref|YP_003099792.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] gi|255920435|gb|ACU35946.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] Length = 302 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 37/288 (12%) Query: 1 MKCLVIGNN---GQIAQSLSSMCVQDVEIIRVGRP-----------DIDLLKPKDFASFF 46 M+ LVIG+ G +A L + V V R RP ++D+ + Sbjct: 9 MRVLVIGSGYLGGAVAGRLRAGGVDAVVCSRR-RPGAASAGGAPWRELDVRDGRACRELV 67 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +P+ ++ + + E PE+A +A GA IA A + G + ISTD VFDG Sbjct: 68 AELAPEGVVVVHGPSDITWCEANPELAREAHAGGARNIADAVE--GRHVVLISTDNVFDG 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSIFGSNFLLSML 163 +R E P +P N YG +KLA E + S V L W NF + + Sbjct: 126 -TRASSGESDPVSPANAYGAAKLAAERTFLERGSALALRVSLVHGWDPDGLRPNFATTCV 184 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VS 221 R ++ RE+ V D + TP ++ ++ + G+ H+ GGP +S Sbjct: 185 RALRDGRELDVPEDHWNTPVHVDDVSAWVVAL-------MGARRTGVLHL---GGPDRLS 234 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++A I A+ G + + R + A RP +CL + A Sbjct: 235 RLEWARRI----ADAQGLDAGLLRPVRRADSAYACRPENACLHSERAA 278 >gi|154285112|ref|XP_001543351.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150406992|gb|EDN02533.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 332 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 V+G A + + M D EI++ DLL + + P+V+++ AA D Sbjct: 31 VVGQGFSRAGTRTDM---DSEIVKA-----DLLDEGEIVALLDRTKPNVVVHCAANRFPD 82 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNI 123 K + P+ A IN ++A+A S I IYISTDYVF G + P + + T P NI Sbjct: 83 KCDQNPDAARKINVVATRSLARATSSRSILLIYISTDYVFPGRAGEAPYEASAKTEPPNI 142 Query: 124 YGKSKLAGEEKVASYTNNY---VILRTAWVY 151 YG++K GE V T V+LR +Y Sbjct: 143 YGETKRDGEVAVLEETRGCGLGVVLRVPVLY 173 >gi|152984077|ref|YP_001346418.1| hypothetical protein PSPA7_1032 [Pseudomonas aeruginosa PA7] gi|150959235|gb|ABR81260.1| hypothetical protein PSPA7_1032 [Pseudomonas aeruginosa PA7] Length = 292 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE + +A+ I I S+ VFDG T E T P Sbjct: 61 HDWFQAEQVEAARLNAQERAVERLAELCQHYEILLIQPSSYRVFDGARATAYSEKDETLP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ + L L A++ + + + D+ G Sbjct: 121 LGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLYLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR ++ + L + L G +H + A + I E Sbjct: 181 NPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNE-------- 229 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ YR Q P+ +AH P ++ + C K+ +T I+ W+ G+ +L Sbjct: 230 ARSYRSNLIQEPSAEAHAARPDAADEPQHAVMVCKKILHTFGIKPRAWRAGLPPLL 285 >gi|266619214|ref|ZP_06112149.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288869264|gb|EFD01563.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 293 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 9/199 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + +V G NG + + EI ++D+ SF P ++I+ AA + Sbjct: 3 RWMVTGTNGFLGSRIMEYYQDKYEITGANHGNLDITDEGAVTSFVKKARPRLVIHCAAIS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTN 119 ++ P ++ ++N +GA +A+A G I++S+D ++ G +RT P E + Sbjct: 63 NTGTCQENPGLSEAVNVKGAVNLARACRETGSRLIFMSSDQIYAG-NRTMEPGKEENTPK 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREIS 173 P+N+YG K E+++ + LR W+Y SN L ++L+ R ++ Sbjct: 122 PVNVYGLHKRQAEDEIMAILPEAACLRLPWMYDFPWRGLKSNSNLLGNLLKALIHNRPLT 181 Query: 174 VVCDQFGTPTSALQIARAI 192 + + T A+++ + + Sbjct: 182 LPVYDYRGITWAMEVVKHV 200 >gi|296162447|ref|ZP_06845238.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] gi|295887260|gb|EFG67087.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] Length = 277 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 1/122 (0%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 G+ +D+ + F +PD ++ AA D E +P +A ++N + +A AA+ Sbjct: 11 GKIALDIRDARAVEQFVEREAPDALVITAAERRPDVCEHDPALARALNVDAVRTLAAAAN 70 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 G + ISTDYVFDG + P S PLN YG SKL GE + T+ +LR Sbjct: 71 RRGAWTLSISTDYVFDG-THPPYQHDSVPAPLNAYGHSKLEGERALMESTDLGCVLRLPL 129 Query: 150 VY 151 +Y Sbjct: 130 LY 131 >gi|238023766|ref|YP_002907998.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] gi|237878431|gb|ACR30763.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] Length = 314 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 2/123 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L + FF PD +I AA D E EP A +IN E A+A AD++G Sbjct: 57 LDVLDARALDRFFAEHRPDAVIVCAAERRPDVCEHEPAAARAINVEALAALAARADALGA 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS- 152 + +STDYVFDG + P E P PLN YG+SK GE + + +LR +Y Sbjct: 117 WTLAMSTDYVFDGRA-APYRETDPPAPLNAYGRSKADGEAALLDASARACVLRLPLLYGP 175 Query: 153 IFG 155 +FG Sbjct: 176 VFG 178 >gi|310792470|gb|EFQ27997.1| RmlD substrate binding domain-containing protein [Glomerella graminicola M1.001] Length = 317 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 16/188 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + F P V+++ AA DK + +P+ A ++N ++AK + Sbjct: 46 VDLGDTAEVEKFLDESKPQVVVHCAAQRFPDKVDSDPDAARALNVAATKSLAKLCAARST 105 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAG------EEKVASYTNNYVILR 146 IYISTDYVF G P + +PT P N+YG++KL G E K A ++LR Sbjct: 106 LLIYISTDYVFSGKPGEAPYEADAPTGPTNLYGQTKLDGELAVLEEYKAAGCEGLGLVLR 165 Query: 147 TAWVY------SIFGSNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHN 198 +Y + +N L+ L ++ + V D + PT+ + R IA Sbjct: 166 VPVLYGKADTPAESATNILMETLWKTQDGQS-KVKMDHWAIRYPTNTEDVGRVCHDIAVK 224 Query: 199 LIENSDTS 206 +E D S Sbjct: 225 YLEAGDRS 232 >gi|87123123|ref|ZP_01078974.1| hypothetical dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] gi|86168843|gb|EAQ70099.1| hypothetical dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] Length = 289 Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 30/289 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRP-----DIDLLKPKDFASFFLSFSPDV 53 +K LV G G + SL +Q+ ++IR+G +IDL+ + A + PDV Sbjct: 2 IKVLVTGATGLLGCSLVPF-LQECGHQVIRMGNTRASDLNIDLVSYEQTARALDNTKPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTP 111 IIN AA T VD+ E P+ A+ +N + + + G C I ISTD V+DG Sbjct: 61 IINLAALTNVDRCETHPQEAYLLNVKAVENLCAWIKTAGQVCHLIQISTDQVYDGPGPHS 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF--GSNFLLSMLRLAK-E 168 E + N Y SKLAGE + + T + ILRT +V G L L A + Sbjct: 121 EGELTIC---NFYAMSKLAGE--IIAGTVSSTILRTNFVGRSLCGGRASLTDWLHCALID 175 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + ++V D +P L I+ I H ++E G+F++ + G A++ Sbjct: 176 QTAVNVFEDVMFSP---LAISTLCDCIEHCIVERPP----GVFNLGSREG----MSKADF 224 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRI 276 F +A RG + + R+ +K T A RP C++ + +I++ Sbjct: 225 AFAFAAARGLETTNLKRVNSKSITTLVARRPTDMCMNSGRFEECMDIKL 273 >gi|169776059|ref|XP_001822496.1| NAD dependent epimerase/dehydratase family protein [Aspergillus oryzae RIB40] gi|83771231|dbj|BAE61363.1| unnamed protein product [Aspergillus oryzae] Length = 323 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL D P +II+ AA + D E +PE A +N E +A+ A S G Sbjct: 56 DLENKDDIQRILDEAKPQIIIHCAANRSPDLCEQDPEKARRVNVEATRTLAEEASSRGAF 115 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF G P + + TNP N+YG+ K GE V T ++LR + Sbjct: 116 LIYISTDYVFPGKEGEAPYETDAETNPPNLYGQLKRDGEVAVLEATKETGLGLVLRVPVL 175 Query: 151 YSIFGSN 157 Y +N Sbjct: 176 YGPSDNN 182 >gi|297567134|ref|YP_003686106.1| dTDP-4-dehydrorhamnose reductase [Meiothermus silvanus DSM 9946] gi|296851583|gb|ADH64598.1| dTDP-4-dehydrorhamnose reductase [Meiothermus silvanus DSM 9946] Length = 240 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 10/195 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +G++ +L + ++I ++D+ P P I++ AAY Sbjct: 1 MKLLLTGGSGRLGTALRGLMP---DLIAPSLRELDITDPSSIRRALERHQPQAIVHAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V AE E + +N EG +A++A G+ ++ISTDYVF G ++ P Sbjct: 58 TDVAGAERERAACWRVNVEGTRNLARSALERGLFFVHISTDYVFWGDVGGYREDDPPGPV 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTA-----WVYSIFGSNFLLSMLRLAKERREISVV 175 N Y +KL EE V + + VI RT+ W Y + ++ S L E+++ Sbjct: 118 RNYYALTKLVAEEAVRAVPRHLVI-RTSFRPSPWPYPVAYTDLYTSQDYLEVIAPEVALA 176 Query: 176 CDQFGT-PTSALQIA 189 P L IA Sbjct: 177 LGHLAQIPFDTLHIA 191 >gi|291296405|ref|YP_003507803.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] gi|290471364|gb|ADD28783.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] Length = 247 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 3/125 (2%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E+I R ++D+ P F + P V+++ AAYT V AE E + + +N EG + Sbjct: 28 ELIAPSRAELDITDPSSVERAFAKYQPKVVVHAAAYTNVAGAEIEKALCWRVNVEGTRNL 87 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGKSKLAGEEKVASYTNNYV 143 +AA + ++ISTDYVF G E P P+ N Y SKL EE V + ++ Sbjct: 88 VRAALGHDLHFVHISTDYVFWG-DVGGYREEDPVGPVRNYYALSKLVAEELV-RLLSRHL 145 Query: 144 ILRTA 148 I+RT+ Sbjct: 146 IIRTS 150 >gi|160937122|ref|ZP_02084485.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC BAA-613] gi|158440023|gb|EDP17771.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC BAA-613] Length = 294 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 7/175 (4%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E + V ++D+ ++F + PD +++ AA + E P ++ +N G + Sbjct: 29 EAVGVTHRELDIEDFVAVSAFIKAIRPDYVLHCAAISNTGTCERNPVLSEKVNVRGTINL 88 Query: 85 AKAADSIGIPCIYISTDYVFD-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 AKA + G I+ S+D +++ S P E S P N+YG+ K EE + +Y + V Sbjct: 89 AKACRNAGSRMIFTSSDQIYNTSHSMEPNREGSEGKPGNVYGRDKKRAEEAMLTYLPDAV 148 Query: 144 ILRTAWVYS------IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI 192 LR W+Y G L + K+RRE+ + T ++ R + Sbjct: 149 ALRLTWMYDAPSRGRAAGQGLLQKLADALKDRREVEFPVHDYRGITYVWEVVRHL 203 >gi|325093589|gb|EGC46899.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H88] Length = 332 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D EI++ DLL + + P+V+++ AA DK + P+ A IN Sbjct: 46 DSEIVKA-----DLLDEGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATR 100 Query: 83 AIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++A+A S I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 101 SLARATSSRSILIIYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRG 160 Query: 142 Y---VILRTAWVY 151 V+LR +Y Sbjct: 161 CGLGVVLRVPVLY 173 >gi|240277510|gb|EER41018.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H143] Length = 332 Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D EI++ DLL + + P+V+++ AA DK + P+ A IN Sbjct: 46 DSEIVKA-----DLLDEGETVALLERTKPNVVVHCAANRFPDKCDQNPDAARKINVAATR 100 Query: 83 AIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++A+A S I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 101 SLARATSSRSILIIYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRE 160 Query: 142 Y---VILRTAWVY 151 V+LR +Y Sbjct: 161 CGLGVVLRVPVLY 173 >gi|327479354|gb|AEA82664.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 292 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP PDV+IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPAQGWDAASLTQLLDDNRPDVVINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E A + +A+ + S+ VFDG T E P Sbjct: 61 YDWFQSGQPNEPALAAQERAVERLAELCQHHDFVLLQPSSYRVFDGARTTAYSEKDEVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ G++ E+ V + +V+LR W+ L +L+ ++ I + D+ G Sbjct: 121 LDARGQALWRIEQSVRALCPRHVLLRFGWLLDDSRDGVLGRVLQRLEQSEAILLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + L G +H A+ + E+A+ R Sbjct: 181 NPTPVDDAARVILAVLKQL--DCQAPLWGTYHYGGHEASTPLL-VAQALLGEAAKYRDVT 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +K+ + A P + L C K+ T I+ W+ G+ ++L Sbjct: 238 TAKLTPVAHADCSDAAAEPQHGVLACKKIFTTFGIKPRAWRTGLPSLL 285 >gi|281204543|gb|EFA78738.1| methionine adenosyltransferase regulatory beta subunit [Polysphondylium pallidum PN500] Length = 305 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 6/169 (3%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F PDVII+ AA D E++ + +N + I + A ++G + IS+DYVFDG Sbjct: 68 FKPDVIIHSAAERRPDICENDKDRVIQLNVKSTEFINELAMNVGAYLVLISSDYVFDG-E 126 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P + TNPL+ YG++K A E N +ILR +Y + ++ +A++ Sbjct: 127 NAPYKTDAQTNPLSFYGETKRASEVVCLKNPRN-IILRVPVLYGQVETLSESAVTVVAEQ 185 Query: 169 -RREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 ++ +V D Q PT +A+ + + EN D S+ GI+H T Sbjct: 186 IKKNANVEIDNWQLRYPTLVDDVAKCTLMLICKKKENGD-SISGIYHFT 233 >gi|261202802|ref|XP_002628615.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis SLH14081] gi|239590712|gb|EEQ73293.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis SLH14081] Length = 331 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 9/146 (6%) Query: 10 GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 GQ S VEI++ DLL + + P+V+++ AA DK + Sbjct: 33 GQGFSRASGTADSGVEIVKA-----DLLDEGNIVALLEQTKPNVVVHCAANRFPDKCDQN 87 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSK 128 P A IN ++A+A S I IYISTDYVF G P + T+P NIYG++K Sbjct: 88 PAAARKINVAATQSLAQATSSRSILLIYISTDYVFPGRPGEAPYATSAQTDPPNIYGETK 147 Query: 129 LAGEEKVASYTNNY---VILRTAWVY 151 GE V T V+LR +Y Sbjct: 148 RDGEVAVLEQTRESRLGVVLRVPVLY 173 >gi|239612427|gb|EEQ89414.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ER-3] gi|327355230|gb|EGE84087.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ATCC 18188] Length = 331 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 9/146 (6%) Query: 10 GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 GQ S VEI++ DLL + + P+V+++ AA DK + Sbjct: 33 GQGFSRASGTADSGVEIVKA-----DLLDEGNIVALLEQTKPNVVVHCAANRFPDKCDQN 87 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSK 128 P A IN ++A+A S I IYISTDYVF G P + T+P NIYG++K Sbjct: 88 PAAARKINVAATQSLAQATSSRSILLIYISTDYVFPGRPGEAPYAASAQTDPPNIYGETK 147 Query: 129 LAGEEKVASYTNNY---VILRTAWVY 151 GE V T V+LR +Y Sbjct: 148 RDGEVAVLEQTRESRLGVVLRVPVLY 173 >gi|17230828|ref|NP_487376.1| hypothetical protein alr3336 [Nostoc sp. PCC 7120] gi|17132431|dbj|BAB75035.1| alr3336 [Nostoc sp. PCC 7120] Length = 294 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 25/255 (9%) Query: 18 SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSIN 77 ++ +Q +++++V D +K F PD +I+ AA + + + P+ ++ IN Sbjct: 35 ALSIQGIKLLKVNLTDFSEIK-----QIFNEIKPDAVIHTAAQSQPNFCQIHPDESYKIN 89 Query: 78 AEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 + +A+ + IP + S++ VFDG++ +P E P+NIYG+ K+ E + Sbjct: 90 VTASCNLAELCATSSIPYAFTSSELVFDGVN-SPYKETDTVCPVNIYGEQKVLAEVGILE 148 Query: 138 YTNNYVILRTAWVY---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ 194 I R ++ + +F+ ++ + +E+++ D+F TP S A+ I+ Sbjct: 149 RYPIATICRMPLMFGNATPTAKSFIQPFIQTLQSGQELTLFIDEFRTPVSGTTAAKGILL 208 Query: 195 IAHNLIENSDTSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 + + G+ H+ GG +S DF + +A P + + + Sbjct: 209 --------TLGKVTGLIHL---GGKERISRYDFGHIL---AAVFQLPTTGIKACLQRDVN 254 Query: 253 TKAHRPAYSCLDCSK 267 A RPA LD S+ Sbjct: 255 MAAPRPADVSLDSSQ 269 >gi|312877141|ref|ZP_07737112.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] gi|311796115|gb|EFR12473.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] Length = 125 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 2/125 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ Q+ + +E I +D+ K F IIN AA Sbjct: 1 MKVLITGAAGQLGQAFQRFFTKKGIEYIAADHGMLDITNLKQLRKFVKGKDITHIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVDKAE++ + A+ +N G +A + I ++ STDYVFDG TP F T Sbjct: 61 YNAVDKAEEDWKTAYLVNGLGVRNLAIISLENKIELVHYSTDYVFDGKKSTPYTIFD-TP 119 Query: 120 PLNIY 124 L+IY Sbjct: 120 SLSIY 124 >gi|225387327|ref|ZP_03757091.1| hypothetical protein CLOSTASPAR_01080 [Clostridium asparagiforme DSM 15981] gi|225046576|gb|EEG56822.1| hypothetical protein CLOSTASPAR_01080 [Clostridium asparagiforme DSM 15981] Length = 355 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 4/121 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F PD +I+ AA + + E EPE ++++N GA IA A + G Sbjct: 53 DICDAAGLLALFCQVGPDYVIHCAAVSDTGRCEREPEFSYAVNVTGAENIAMACRASGAK 112 Query: 95 CIYISTDYVFDGLSRT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I+ S+D V+ RT P E P +YG+ KL E++ A+ + V LR +W+ Sbjct: 113 LIFCSSDQVYFDNVRTAFPVPRRESEKLYPSGVYGRQKLEAEKRCAAACPDTVSLRLSWM 172 Query: 151 Y 151 Y Sbjct: 173 Y 173 >gi|210622691|ref|ZP_03293313.1| hypothetical protein CLOHIR_01261 [Clostridium hiranonis DSM 13275] gi|210154092|gb|EEA85098.1| hypothetical protein CLOHIR_01261 [Clostridium hiranonis DSM 13275] Length = 290 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 1/151 (0%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G G IA + + I++ R D D P + F S D+ ++ AA Sbjct: 6 LVTGARGYIASYIQNNNKDKFNWIKMTRDDADFSNPDEVEKFVKSQEFDICLHTAANATT 65 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLN 122 E+ PE+A +IN E I A G I+ ST+ +F+G + P E + Sbjct: 66 AVCEENPELAANINVESTKRIVDACKEKGARLIFCSTEQIFNGKENHGPFKEDEEPKAVT 125 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +YG++K+ E+ + + VILR +W+ + Sbjct: 126 VYGQNKIDCEKYINDSGVDAVILRFSWMMGL 156 >gi|302911314|ref|XP_003050465.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731402|gb|EEU44752.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 319 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 16/195 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + AS P VI++ AA DK + +PE A ++N + ++++ A I Sbjct: 46 VDLSNESEVASLLEETKPQVIVHCAAQRFPDKVDKDPEAARALNVAASKSLSQLAVDRDI 105 Query: 94 PCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILR 146 IYISTDYVF G+ P + + P N+YG++KL GE V A V+LR Sbjct: 106 FVIYISTDYVFPGVPGDAPYEADAEPRPTNLYGQTKLDGERAVLETFAKAGKEGLGVVLR 165 Query: 147 TAWVYSIFGS------NFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHN 198 +Y + N L+ L A + + I V D + PT+ I R I+ Sbjct: 166 VPVLYGNAETPAESAVNVLMDALWKA-QTQGIEVNMDHWAIRYPTNTEDIGRVCHDISVK 224 Query: 199 LIENSDTSLRGIFHM 213 ++ + G+ H+ Sbjct: 225 YLDTAPGDRAGLPHI 239 >gi|312963314|ref|ZP_07777797.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311282394|gb|EFQ60992.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 292 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ +P D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPKPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAEAVSETRLAAQEFAIERLAELCQHHTITLVQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSVDGTLGRFLARAEQPDELLMADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PT AR II + L + L G +H A + I E+ Sbjct: 181 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTEARNFHALA 237 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ +L Sbjct: 238 IEAPTAQAH----AARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPALL 285 >gi|186476724|ref|YP_001858194.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] gi|184193183|gb|ACC71148.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] Length = 306 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 10/154 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRV--GRP-----DIDLLKPKDFASFFLSFSPD 52 K VIG +G + ++++ V QD +I++ RP +D+ F P+ Sbjct: 3 KVAVIGASGLLGRTIAGELVRQQDWQIVQTTFSRPMPESVPLDIRDASAVDQFVERERPN 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 I+ AA D E+ P +A ++N + AIA AA + ISTDYVFDG + P Sbjct: 63 AIVIAAAERRPDVCENNPALARALNVDAVRAIASAARRHDAWVLSISTDYVFDGTA-PPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 + +P+N YG+SKL GE +A + +LR Sbjct: 122 RYDATPSPINAYGRSKLEGERALADAADLGCVLR 155 >gi|309799686|ref|ZP_07693905.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus infantis SK1302] gi|308116715|gb|EFO54172.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus infantis SK1302] Length = 157 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 14/158 (8%) Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 E V +N+ I+RTA + + NF+ +M LAK + ++VV DQ G PT +A Sbjct: 7 NEFYVIKLVSNFYIIRTACFFGNYVKNFVFTMQNLAKTHKTLTVVNDQHGRPTWTRTLAE 66 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRIFTK 249 + + N E G +H++ D +W DFA I ++ P + + Sbjct: 67 FMTYLTENRKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVEVKP------VDSS 114 Query: 250 QYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 Q+P KA RP S + +K A I TW++ ++ Sbjct: 115 QFPAKAKRPLNSTMSLAK-AKATGFVIPTWRDALKEFF 151 >gi|107028498|ref|YP_625593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116686494|ref|YP_839741.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105897662|gb|ABF80620.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116652209|gb|ABK12848.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 321 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL F + P +I AA D E +P+ A +IN I A G Sbjct: 62 ELDLLDQPSLERIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPARIGALATRYG 121 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR ++ Sbjct: 122 AWTLGISTDYVFDGKA-APYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLF 179 >gi|229592860|ref|YP_002874979.1| putative rhamnose biosynthesis-like protein [Pseudomonas fluorescens SBW25] gi|229364726|emb|CAY52697.1| putative rhamnose biosynthesis-related protein [Pseudomonas fluorescens SBW25] Length = 294 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/296 (21%), Positives = 112/296 (37%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ +P D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPKPPKDGWDAASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAEVVSETRLAAQEFAIERLAELCQHHNITLLQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSVDGTLGRFLARAEKPDELLMADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + I E Sbjct: 183 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTE-------- 231 Query: 241 SKVYRIFTKQYPT-KAH--------RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + + PT +AH P ++ L C K+ +T I+ W+ G+ +L Sbjct: 232 ARTFHPLAIESPTAQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPALL 287 >gi|66814166|ref|XP_641262.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium discoideum AX4] gi|60469300|gb|EAL67294.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium discoideum AX4] Length = 327 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 6/123 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + F F P+VII+ AA D+ E + E +N + + + S+ Sbjct: 60 LDITNDSELSEFVNDFKPNVIIHAAAERRPDQCEGDKEKTQKLNVGTTEKLIELSKSVNA 119 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILRTA 148 YIS+DYVFDG P D + TNPL+ YGK+K E+ + S + Y+ILR Sbjct: 120 TLFYISSDYVFDG-ENPPYDIDAKTNPLSFYGKTKEESEQLIIKASKESDSFKYIILRVP 178 Query: 149 WVY 151 +Y Sbjct: 179 VLY 181 >gi|313902633|ref|ZP_07836032.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] gi|313467071|gb|EFR62586.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] Length = 298 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 5/124 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + A+ F F P+ +I+ AA +V+++ + P+ +N G + + A + G Sbjct: 34 LDITQAGEVAAVFRDFRPEAVIHLAAQVSVERSLERPDQDVDVNVYGTLNLVREAVAAGT 93 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTA 148 ++ S+ V+ R P+DE P PL++YG+SKLA E + Y VILR Sbjct: 94 RRVVFASSAAVYGDPQRLPVDEDHPLKPLSVYGRSKLAAEWLIQQYAQGTGLEAVILRLG 153 Query: 149 WVYS 152 VY Sbjct: 154 NVYG 157 >gi|70608019|ref|YP_256889.1| hypothetical protein Saci_2310 [Sulfolobus acidocaldarius DSM 639] gi|68568667|gb|AAY81596.1| conserved Prokaryal protein [Sulfolobus acidocaldarius DSM 639] Length = 236 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 6/171 (3%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ D+A +A++IN A IA++A+ IGI +Y+ST +FDG + Sbjct: 36 PDVVIHTYE-IPYDEANSSKALAWNINTWHAINIARSANKIGITNVYLSTFLLFDG-KKG 93 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E S PLN YG +KL GE + S NY+I+R V S + + + + ++R Sbjct: 94 YYSETSTPTPLNYYGLTKLVGESGIMS-LGNYLIIRLGLVTSFNYHSIAYYLYKASLKKR 152 Query: 171 EISVVCDQFGTPTS---ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 I + + +P + A +I +I+ + N R +F + D G Sbjct: 153 IIKCNTNFYVSPITLNEASEITAGLIKKGIKGVVNVAGKRRSMFEVCRDIG 203 >gi|309789989|ref|ZP_07684565.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] gi|308228009|gb|EFO81661.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] Length = 293 Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL +P++ + +F P II+ A + EP++ +I G+G IA+ A S+G Sbjct: 49 MDLREPEEVRAILHAFQPTAIIHTAF------VQYEPDL-LAITGYGSGLIAEIAASLGA 101 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++S+D +FDG P E NP++ YG++K E V + ++RT+ +Y Sbjct: 102 RLIHMSSDVIFDGERTGPYTENDAPNPISAYGEAKALAERLVQAAYPAATLVRTSLIYGF 161 Query: 154 FGSNFLLSM-LRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 + L +A +R + D++ P +A A+I++ Sbjct: 162 APIDRQTRFALEIAAGQRSDRLFSDEYRCPIFVDDLAAALIEL 204 >gi|330835223|ref|YP_004409951.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] gi|329567362|gb|AEB95467.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] Length = 264 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 15/151 (9%) Query: 51 PDVIIN----PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PD++I+ P VDKA A+++N A IA+AA +G +Y+S+ +F+G Sbjct: 37 PDIVIHTYETPYYEANVDKAR-----AWNVNTWLAINIARAAHRVGAKNVYLSSSMIFNG 91 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 R E S +PLN YG +KLAGE +AS NY+ILR ++S+ L +L+ Sbjct: 92 -RRGFYKETSTPDPLNYYGITKLAGETGIAS-LGNYLILRVGLLFSLSFKGLLSGLLKNL 149 Query: 167 KERREISVVCDQ--FGTPTSALQIARAIIQI 195 R + V+C++ + + S ++ + I Q+ Sbjct: 150 ILRGK--VICNKNFYFSAISTKELGKVISQL 178 >gi|293401867|ref|ZP_06646008.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304819|gb|EFE46067.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 289 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 1/150 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + ++ G NG IA + ++++ + R D D P ++F D + + AA Sbjct: 3 RIIITGGNGFIASLVKESLKNTMDVVAMTRKDADFADPDAVRAWFEKQEFDYVFHTAAMA 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNP 120 E+ PE+ + +N E IA ++IST+ F+ + P E Sbjct: 63 QTADCENYPELTYRVNVESTKVIADICKERHARLLFISTEQCFNAKTCAGPFKEEDSLCS 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + YG+ K+ E + S+ +Y+ILR +W+ Sbjct: 123 ITKYGQHKVECENYITSHLEDYLILRFSWM 152 >gi|225556964|gb|EEH05251.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus G186AR] Length = 329 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 12/133 (9%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D EI++ DLL D P+V+++ AA DK + P+ A IN Sbjct: 46 DSEIVKA-----DLL---DEGVMITGLKPNVVVHCAANRFPDKCDQNPDAARKINVAATR 97 Query: 83 AIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++A+A S I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 98 SLARATSSRSILLIYISTDYVFPGRPGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRG 157 Query: 142 Y---VILRTAWVY 151 V+LR +Y Sbjct: 158 CGLGVVLRVPVLY 170 >gi|313114188|ref|ZP_07799740.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623597|gb|EFQ07000.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255] Length = 280 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PDVI++ AA + P A+ N E +A+AA + S+D V+ G+ Sbjct: 49 ALHPDVILHTAALSDTSYCAQHPAEAYRANVELPVWLARAAQQTKAKLVAFSSDQVYAGV 108 Query: 108 SRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLL 160 + P+ E +P NIYG+ KL E++V + V LR +W+Y + G N L Sbjct: 109 QQQGPLPETLALHPANIYGQYKLKAEQRVLELCPDSVHLRASWMYDLPGYGLPIRGNLPL 168 Query: 161 SMLRLA 166 ++LR A Sbjct: 169 NLLRAA 174 >gi|121719189|ref|XP_001276315.1| NAD dependent epimerase/dehydratase family protein [Aspergillus clavatus NRRL 1] gi|119404513|gb|EAW14889.1| NAD dependent epimerase/dehydratase family protein [Aspergillus clavatus NRRL 1] Length = 314 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K D + P ++I+ AA + D + PE A +N E +A+ A S Sbjct: 46 DLEKDGDIRNLLDEAKPQIVIHCAANRSPDLCDKNPEEARGVNVEATRILAEEASSRKAL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 IYISTDYVF G P + + ++P N+YG+ K GE V T VILR + Sbjct: 106 MIYISTDYVFSGKEGEAPYEADAESHPTNLYGQLKRDGELAVLEATKETGLGVILRVPVL 165 Query: 151 YSIFGSN 157 Y SN Sbjct: 166 YGTAQSN 172 >gi|295676079|ref|YP_003604603.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] gi|295435922|gb|ADG15092.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] Length = 307 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVG--RPD-----IDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L V+ I+ RP +D+ F PD Sbjct: 3 KVAVIGGSGLLGRALIDELAGQVDWHIVSTAFSRPSPQMVRLDVRDSLAVERFIDHVVPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P A ++N + IA AA+ G + ISTDYVFDG P Sbjct: 63 AVVIAAAERRPDVCERDPAHARALNVDAVQMIASAANRHGAWTLSISTDYVFDG-KHPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG+SKL GE + +LR +Y Sbjct: 122 RHDSTPAPLNAYGQSKLEGERALIETAERGCVLRLPLLY 160 >gi|170698254|ref|ZP_02889331.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170136835|gb|EDT05086.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 314 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG---RPD----------------IDLLKPKDFAS 44 L+IG +G + +++++ ++ + +V PD +D+L Sbjct: 7 LLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPENVARLDVLDQPALEH 66 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P +I AA D E +P A +IN + I A G + ISTDYVF Sbjct: 67 LFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYVF 126 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG + P E + NPLNIYG++KL GE + + + +LR +Y Sbjct: 127 DGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLY 172 >gi|171320478|ref|ZP_02909509.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171094289|gb|EDT39365.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 314 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG---RPD----------------IDLLKPKDFAS 44 L+IG +G + +++++ ++ + +V PD +D+L Sbjct: 7 LLIGASGLLGRAVAAALSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALEH 66 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P +I AA D E +P A +IN + I A G + ISTDYVF Sbjct: 67 LFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYVF 126 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG + P E + NPLNIYG++KL GE + + + +LR +Y Sbjct: 127 DGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLY 172 >gi|242215185|ref|XP_002473410.1| predicted protein [Postia placenta Mad-698-R] gi|220727507|gb|EED81424.1| predicted protein [Postia placenta Mad-698-R] Length = 301 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 21/176 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-------GAIAK 86 +DLL + F F PD +I+ AA E P++A ++ A +A+ Sbjct: 41 LDLLDSAEVERVFSEFKPDWVIHCAA-------ERRPDVAEKVHTRKALWLAFLPAHLAQ 93 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT-NNYVIL 145 + ++ +YISTDYVFDG S P S TNP+N+YG++K GE V + + VIL Sbjct: 94 ISKALKFTLVYISTDYVFDGTS-PPYTPSSLTNPVNLYGRTKRDGELAVLGVSGSKTVIL 152 Query: 146 RTAWVYSIFGSN---FLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIA 196 R +Y N + +L + ++ D + T PT+ L IA +++++ Sbjct: 153 RVPVLYGPAPKNSDSAVNILLDVVTDQSGKQYKMDHYATRYPTNVLDIADFLVRLS 208 >gi|328874735|gb|EGG23100.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium fasciculatum] Length = 315 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 18/194 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + L F P VII+ AA ++ E+ E F++N I+ A +G Sbjct: 51 VDLCDKEQLRQLVLDFKPTVIIHSAAERNLNNCENNKEKTFNLNVSTTEYISDLAKEVGA 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV--ILRTAWVY 151 + IS+DYVFDG S P + T+PL+ YG++K E +V + +N + ILR +Y Sbjct: 111 YILLISSDYVFDGTS-PPYTPDAKTHPLSFYGETK--RESEVVALKSNPLNKILRVPVLY 167 Query: 152 SIFGSNFLLSMLRLAKE----RREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDT 205 + S+ +A + ++E V D Q PT +AR + ++LI D Sbjct: 168 GQVENLKECSVTMVANQIINKKKEELVEIDNSQIRYPTLVDNVAR----VGYDLIGLGDV 223 Query: 206 SLR---GIFHMTAD 216 + + GI+H T + Sbjct: 224 TNQLQGGIYHYTGN 237 >gi|17547871|ref|NP_521273.1| hypothetical protein RSc3152 [Ralstonia solanacearum GMI1000] gi|17430177|emb|CAD16940.1| probable nad-dependent epimerase/dehydratase;dtdp-4-dehydrorhamnose reductase; oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 276 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 22/161 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--------DLLKPKDFASFFLSFSPD 52 M L+ G G + LS +++R R DI D+ + PD Sbjct: 1 MNVLITGARGYLGALLSVALSGSHDVVRTSRGDISNSLFQYLDVTDADCVKRVVAATVPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VII+ AA + E PE AF +NAEG + +AA+ +G ++IST Sbjct: 61 VIIHAAAMANLSVCEANPEAAFLVNAEGTLNVVQAANEVGARVLFIST------------ 108 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + +NP +YG+SK A EE V + I++ + + + Sbjct: 109 --LAASNPSIVYGRSKSAAEEHVKHVRMGHEIVQLSMTFGL 147 >gi|282601176|ref|ZP_05981009.2| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] gi|282569884|gb|EFB75419.1| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] Length = 281 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 7/174 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G G + + +E++ + + ++ PD I++ AA Sbjct: 2 MRVLLTGAGGFLGARILQQLAGRLELLTLPHGLMARAGQEELREAVARLHPDAILHTAAL 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 + E PE ++ N E +A+AA + G + S+D V+ GL P E +P + Sbjct: 62 SDTGYCEAHPEESYRANVEVPFWLAEAARAAGAKLVAFSSDQVYAGLQEHGPFTENTPLS 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLLSMLRLAK 167 P N+YG+ K E++V V+LR W+Y + G N L++LR A+ Sbjct: 122 PANVYGRHKREAEQRVLDILPGAVLLRATWLYDLPGYGLPIRGNLPLNLLRAAR 175 >gi|172065131|ref|YP_001815843.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] gi|171997373|gb|ACB68290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] Length = 314 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG---RPD----------------IDLLKPKDFAS 44 L+IG +G + +++++ ++ + +V PD +D+L Sbjct: 7 LLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALEH 66 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P +I AA D E +P A +IN + I A G + ISTDYVF Sbjct: 67 LFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYVF 126 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG + P E + NPLNIYG++KL GE + + + +LR +Y Sbjct: 127 DGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLY 172 >gi|323525478|ref|YP_004227631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] gi|323382480|gb|ADX54571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] Length = 306 Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RPD-----IDLLKPKDFASFFLSFSPD 52 K V+G +G + +++ + VG RP +D+ + + F +PD Sbjct: 3 KVAVMGASGLLGRAIVDELAGQPDWQVVGTAFSRPTPNTVVLDVREARAIEQFIDREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E PE+A ++N + AIA AA G + ISTDYVFDG +R P Sbjct: 63 ALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLSISTDYVFDG-TRPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG+SKL GE +A+ T+ +LR +Y Sbjct: 122 RPDSEPAPLNAYGRSKLEGERALAAATDFGCVLRLPLLY 160 >gi|170735094|ref|YP_001774208.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169821132|gb|ACA95713.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 321 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L F + P +I AA D E +P A +IN I A G Sbjct: 62 ELDVLDQSSLERIFETHRPAAVILCAAERRPDVCERDPAAARAINVTAPARIGALATRYG 121 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR ++ Sbjct: 122 AWTLGISTDYVFDGKA-APYSENATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLF 179 >gi|307730301|ref|YP_003907525.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] gi|307584836|gb|ADN58234.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] Length = 307 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 80/307 (26%), Positives = 125/307 (40%), Gaps = 31/307 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RPD-----IDLLKPKDFASFFLSFSPD 52 K VIG +G + +++ + + VG RP +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRAVMNELAKQPAWQVVGTAFTRPAPNTVALDVRDSRAVEKFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E PE+A ++N + AIA AA G + ISTDYVFDG SR P Sbjct: 63 ALVVAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLSISTDYVFDG-SRPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA--------WVYSIFGSNFLLSMLR 164 + PLN YG+SKL GE + T+ +LR W S S Sbjct: 122 RPDAEPAPLNAYGRSKLEGERALTGATDFGCVLRLPLLYGPIVDWAESAVTSLVPAIAAS 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + + + P+ +A I Q+ +E + ++RGI H W+ Sbjct: 182 VGAQGKAAHMDAWAIRYPSFTPDVAFVIRQMLERHVEGN--AIRGIVH---------WSG 230 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHRPAYSC-LDCSKLANTHNIRISTWKEG 282 +E A R + T Q+ PT A ++C L +L R + + G Sbjct: 231 DEPMTKYEIAMRLAEALNLDARLTPQHAPTDATPRPHNCHLASERLEQLGIGRRTAFDTG 290 Query: 283 VRNILVN 289 +R +L Sbjct: 291 IREVLAG 297 >gi|196005271|ref|XP_002112502.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens] gi|190584543|gb|EDV24612.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens] Length = 298 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 35/272 (12%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 ++ RV D++ +K F PDVI++ AA D + + ++A +N + + + Sbjct: 40 DLRRVDLSDVNAVK-----EVVREFQPDVIVHAAAERRPDIVDKKTDVARQLNVDVSRNL 94 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYV 143 A A + +Y+STDYVFDG + P PLN YG K GE+ V +Y Sbjct: 95 ALIAKTFNCFILYVSTDYVFDGCN-PPYQPADQPAPLNTYGMLKWQGEKAVLETYPKRSG 153 Query: 144 ILRTAWVYSIF------GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 ILR +Y LL ++ + E+S ++ PT +A I QI+ Sbjct: 154 ILRLPILYGEVEYLEESAVTVLLKAIQNGNKPGEMSDYEKRY--PTYVGDVAVVIRQISD 211 Query: 198 NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-----P 252 ++ D + GI+H W+ E ++ A + +K + I K P Sbjct: 212 KTLQ--DENFYGIWH---------WSGLEELTKYQMALK---IAKAFNIDYKHLVAVNKP 257 Query: 253 TK-AHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + A RP S LD S L + + +++++G+ Sbjct: 258 SPGAKRPYNSHLDISTLTQLNFGQQTSFQDGI 289 >gi|115360828|ref|YP_777965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115286156|gb|ABI91631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 317 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG---RPD----------------IDLLKPKDFAS 44 L+IG +G + +++++ ++ + +V PD +D+L Sbjct: 10 LLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALEQ 69 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P +I AA D E +P A +IN + I A G + ISTDYVF Sbjct: 70 LFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYVF 129 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG P E + NPLNIYG++KL GE + + + +LR +Y Sbjct: 130 DG-KDAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLY 175 >gi|134291975|ref|YP_001115744.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134135164|gb|ABO59489.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 317 Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEII--------------RVGRPD-----IDLLKPKDFAS 44 L+IG +G + +++++ ++ + RV P +D+L Sbjct: 10 LLIGASGLLGRAVAAALSREASLTLVATIRNADTAGARRVALPPEHTARLDVLDQPALER 69 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P +I AA D E +P A +IN + I A G + ISTDYVF Sbjct: 70 LFDARRPSAVIVCAAERRPDVCESDPSAARAINVDAPARIGALAARYGAWTLGISTDYVF 129 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG + P E + NPLN+YG++KL GE + + + +LR +Y Sbjct: 130 DGRA-APYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPLLY 175 >gi|254250399|ref|ZP_04943718.1| NAD dependent epimerase/dehydratase family protein [Burkholderia cenocepacia PC184] gi|124879533|gb|EAY66889.1| NAD dependent epimerase/dehydratase family protein [Burkholderia cenocepacia PC184] Length = 321 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L F + P +I AA D E +P+ A +IN I A G Sbjct: 62 ELDVLDQPSLERIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPARIGALATRYG 121 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR ++ Sbjct: 122 AWTLGISTDYVFDGKA-APYREDATPNPLNIYGRTKLEGEVALLAASPLSCVLRLPLLF 179 >gi|330884459|gb|EGH18608.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 58 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 41/57 (71%) Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV DQ+ Sbjct: 2 VYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNVVADQY 58 >gi|326434355|gb|EGD79925.1| hypothetical protein PTSG_10207 [Salpingoeca sp. ATCC 50818] Length = 462 Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 30/193 (15%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 V R ++L K +F PD+I++ AA ++ P++A++INAEG +A A Sbjct: 96 VLRERLELKDDKGIQDGVRAFDPDLILHFAAMSSTSLCASNPDLAWNINAEGTRRLALAL 155 Query: 89 DSIGIPC----------------IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + + ISTD+V+DG + + E +P +YG++K A E Sbjct: 156 TTTHKSTTAHQQQQQQQQQHPLFVLISTDWVYDGTAAN-VREHAPAPGFGVYGQTKAAAE 214 Query: 133 EKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLA---------KERREISVVCDQFGTP 182 E +S + +ILR+A V FG L+ R + + I+ D++ TP Sbjct: 215 EATSSVLGEHALILRSALV---FGPPSLVDARRRSTLGWMADALRNYERITAYEDEYRTP 271 Query: 183 TSALQIARAIIQI 195 IAR ++ I Sbjct: 272 VYVGDIARLMLHI 284 >gi|219848619|ref|YP_002463052.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] gi|219542878|gb|ACL24616.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] Length = 473 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P P VII +TA + E P++ +I EGAG +A AA IG Sbjct: 234 LDLRDPTAVRRLITEVQPAVII----HTAFRQYE--PDL-MAITGEGAGHVAAAAAEIGA 286 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++S+D +FDG E P NP+ YG++K EE V + + I+RT+ +Y Sbjct: 287 RLIHMSSDVIFDGEKAGAYTEADPPNPITDYGRAKARAEELVQHHHPHAAIVRTSLIYGF 346 Query: 154 ----FGSNFLLSMLR 164 S F L++ R Sbjct: 347 DPLDRHSAFALAVAR 361 >gi|330815739|ref|YP_004359444.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] gi|327368132|gb|AEA59488.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] Length = 326 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 34/219 (15%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRV-GRPDIDLLKPK-------DFASFFLSFSP 51 M+ +V G NG + +SL ++ Q VE++ + RP +L K + DFA + +P Sbjct: 4 MRIVVTGANGFVGRSLVGTLAAQGVEVLALLRRPQGNLGKVQEWLHPAADFAGLGEASTP 63 Query: 52 -----DVIINPAAYTAVDKAEDEPEIAFSI----NAEGAGAIAKAADSIGIP-CIYIST- 100 DV+I+ AA V + E EP +A N +GA +A+AA G+ +++S+ Sbjct: 64 FPEGVDVVIHAAARVHVMR-ESEPGLAQQAFEASNVDGALRVARAARERGVRRLVFVSSI 122 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGS 156 + + + P+DE P +P + YG+SKL E ++ Y + VI+R VY Sbjct: 123 KALAERDAGQPLDEQMPPHPEDAYGRSKLLAERRLREYGESSGLEIVIVRPPLVYGPGVR 182 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 SMLR V P A++ R+++ + Sbjct: 183 ANFESMLR---------AVARGMPLPLGAIEARRSLVHV 212 >gi|221198982|ref|ZP_03572027.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221205242|ref|ZP_03578258.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221175033|gb|EEE07464.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221181433|gb|EEE13835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 316 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 24/265 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L F + P ++ AA D E +P A +IN + I A G Sbjct: 49 LDVLDRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPARIGALAARYGA 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + ISTDYVFDG + P E + NPLN+YG++KL GE + + + +LR +Y Sbjct: 109 WTLGISTDYVFDGRA-APYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGP 167 Query: 154 FG-------SNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSD 204 ++ + +++ A+ E +V D + PT +A I + H + + Sbjct: 168 IADWSESAVTSLVPAIVASARAGAE-AVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAGA- 225 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC-L 263 S+ GI H + D + + A+ I AE G ++ + I T P A Y C L Sbjct: 226 -SVVGIRHWSGDEAMTKY-EIAQRI----AEAMGLHASLAPIDT---PADATPRPYDCHL 276 Query: 264 DCSKLANTHNIRIST-WKEGVRNIL 287 D ++L + IR +T + +R +L Sbjct: 277 DAARL-HALGIRHATPFDTALREVL 300 >gi|134057127|emb|CAK44415.1| unnamed protein product [Aspergillus niger] Length = 324 Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K +D + P ++I+ AA + D + P+ A +N + +A+ G Sbjct: 56 DLEKEEDIKNLLNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVDATRTLAEETARRGAL 115 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G P + + TNP N+YG+ K GE V T + ++LR + Sbjct: 116 LVYISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVL 175 Query: 151 YSIFGSN 157 Y N Sbjct: 176 YGTAKEN 182 >gi|332204384|gb|EGJ18449.1| rmlD substrate binding domain protein [Streptococcus pneumoniae GA47901] Length = 102 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYTA Sbjct: 3 LITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 VD AEDE E+ F+IN G +AKA++ G +YISTD Sbjct: 63 VDAAEDEGKELDFAINVMGTKNVAKASEKHGATLVYISTD 102 >gi|325568862|ref|ZP_08145155.1| hypothetical protein HMPREF9087_1444 [Enterococcus casseliflavus ATCC 12755] gi|325157900|gb|EGC70056.1| hypothetical protein HMPREF9087_1444 [Enterococcus casseliflavus ATCC 12755] Length = 287 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 69/149 (46%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G NG +A + + + + R D+D FF + D++I+ AA+T Sbjct: 6 ITGANGYLASLIQKQNHETFTFLPITRKDVDYEDLAAVNKFFEKQTFDILIHTAAHTQTA 65 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 E P +N + A +AK I+++T+ VF+ + P E +IY Sbjct: 66 DCEAHPFETKKVNTDSAIELAKICKKKNARFIFLNTEQVFNDNAVGPYSESDSPKSASIY 125 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSI 153 G+ KLA E + ++ +Y+ILR +W+ + Sbjct: 126 GQQKLAVETFLRTFDCDYLILRPSWMMGL 154 >gi|317027132|ref|XP_001400195.2| NAD dependent epimerase/dehydratase family protein [Aspergillus niger CBS 513.88] Length = 315 Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K +D + P ++I+ AA + D + P+ A +N + +A+ G Sbjct: 56 DLEKEEDIKNLLNEAKPQIVIHCAANRSPDLCDQNPDQARRVNVDATRTLAEETARRGAL 115 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G P + + TNP N+YG+ K GE V T + ++LR + Sbjct: 116 LVYISTDYVFPGKEGEAPYEADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVL 175 Query: 151 YSIFGSN 157 Y N Sbjct: 176 YGTAKEN 182 >gi|319789632|ref|YP_004151265.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] gi|317114134|gb|ADU96624.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] Length = 324 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 6/148 (4%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++G G I ++ ++ E + G ++DL + + SF PD +I+ AA+ V Sbjct: 19 LLGRKGHIVLTVDNLSRGHREAVLFGELAEVDLSEKEKLKELINSFRPDAVIHFAAFIEV 78 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLN 122 ++ +P+ + N A + +A G+ I+ ST V+ + PI E P NP+N Sbjct: 79 GESVKDPKSFYRNNTCNALNLLEAVVESGVKNFIFSSTAAVYGNPQKVPIPEEHPKNPIN 138 Query: 123 IYGKSKLAGEEKV----ASYTNNYVILR 146 YG SKLA E + +Y NYV LR Sbjct: 139 PYGASKLAVERMLQDFHTAYGLNYVALR 166 >gi|291295470|ref|YP_003506868.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] gi|290470429|gb|ADD27848.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] Length = 283 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 20/192 (10%) Query: 1 MKCLVIGNNGQIAQSL------------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS 48 M+ V G G + +L +S Q + V +D+ Sbjct: 1 MRVFVTGGTGYLGSTLLRLGSGRPWVLGASYWSQPPAVPGVAWVRLDVRDAAAVEQALKE 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P+V+I +TA KA P +I +G +A+A ++G I++STD +FDG Sbjct: 61 FRPEVVI----HTAYSKAS--PAALEAITVQGTVHVARACRALGARLIHLSTDQLFDG-E 113 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM-LRLAK 167 P E + NPL YG++KL E V + I+RT+ ++ + + M L LA Sbjct: 114 NPPYAESAAPNPLTEYGQAKLRAEHWVQAILPTATIVRTSLIWGLNPLDVTSQMVLELAD 173 Query: 168 ERREISVVCDQF 179 +RE + D++ Sbjct: 174 GKREGGLFSDEY 185 >gi|119486569|ref|ZP_01620619.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC 8106] gi|119456186|gb|EAW37318.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC 8106] Length = 291 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 4/154 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + P II+ AA + + + P+ + IN + +A I Sbjct: 47 DLTDFQGLKALIEEIQPTAIIHAAAQSKPNYCQLHPDETYPINVTASINLAGLCADYSIA 106 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--- 151 C + STD VF+GL+ P E P +P++IYG+ K+A E+ + + R ++ Sbjct: 107 CAFTSTDLVFNGLN-PPYKETDPVSPVSIYGEQKVAAEQGMLERNPQVAVCRMPLMFGKA 165 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 S +F+ ++ K +E+ V D++ T S Sbjct: 166 SPHAVSFIQGFVQALKAGKELQVFTDEYRTSVSG 199 >gi|226504976|ref|NP_001150501.1| LOC100284132 [Zea mays] gi|195639658|gb|ACG39297.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays] Length = 350 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 21/265 (7%) Query: 35 DLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 DL F + SF P V++N AA + E +P A + N ++ S G Sbjct: 89 DLRSGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGN 146 Query: 94 P---CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I++STD V++G+ ++ E T P+N+YGKSK+A E+ + +NY ILR++ + Sbjct: 147 DDSLLIHLSTDQVYEGV-KSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSII 205 Query: 151 YS------IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 Y + S + M + + +++ D+F P + I+ + + Sbjct: 206 YGPQTISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDG 265 Query: 205 TSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 ++ + ++ GGP VS AE + + RG S + + P Sbjct: 266 KKVQVLLNV---GGPDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDIS 319 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 +D +KL I+ ++++GVR+ L Sbjct: 320 MDITKLTQILGIKPISFQDGVRSTL 344 >gi|70732835|ref|YP_262602.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] gi|68347134|gb|AAY94740.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] Length = 292 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E S +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAESVSEARLSGQERAVERLAELCQHHNIILLQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A+ E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSPDGILGRFLARAESPDELLMADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + E Sbjct: 181 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGQEATTPLA-LGQAALTE-------- 229 Query: 241 SKVYRIFTKQYPT---------KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + PT A P ++ L C K+ +T I+ W+ + +L Sbjct: 230 ARQLHPLAIEAPTAQAHAASADAAEEPQHAVLACKKILHTFGIKPRAWRAALPALL 285 >gi|170696619|ref|ZP_02887739.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] gi|170138485|gb|EDT06693.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] Length = 306 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 10/159 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR------PD---IDLLKPKDFASFFLSFSPD 52 K VIG +G + +++ + VG PD +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRAIVDELARQPTWQVVGTAFSRPAPDTVPLDVRDSRAIEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +PE+A ++N + AIA AA G + ISTDYVFDG + P Sbjct: 63 ALVIAAAERRPDVCERQPELARALNVDAVRAIAAAAQRRGAWTLSISTDYVFDG-THPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S PLN YG+SKL GE + + T+ +LR +Y Sbjct: 122 RPDSAPAPLNAYGRSKLEGEHALTATTDFGCVLRLPLLY 160 >gi|125584224|gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japonica Group] Length = 386 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 21/248 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---IPCIYISTDYVFDGL 107 P VI+N AA + + E +P A + N ++ S G I++STD V++G+ Sbjct: 74 PHVIVNCAAISVPRQCETDPAAAMATNV--PSSLVTWLLSFGNDNTLLIHLSTDQVYEGV 131 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLLS 161 ++ E T P+N+YGKSK+A E+ + +NY ILR++ +Y + S + Sbjct: 132 -KSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQW 190 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 M + + +++ D+F P + ++ + + + + + + + GGP Sbjct: 191 MDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADG----KAVQVLLNVGGPDR 246 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 VS AE + + RG +S + + P +D +KL I+ ++ Sbjct: 247 VSRLQMAESV---ADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISF 303 Query: 280 KEGVRNIL 287 ++GVR L Sbjct: 304 QDGVRATL 311 >gi|320160045|ref|YP_004173269.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] gi|319993898|dbj|BAJ62669.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] Length = 311 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 13/170 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRP----DIDLLKPKDFASFFLSFS 50 + LV G +G + SL V D E+I V G P D + A Sbjct: 7 RLLVTGASGLLGISLCLDAVGDFEVIGVVNSRRLAGAPFSQVQADFTQTGSAAKLIEEVR 66 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +++ AA +D E ++ +NA G +A+A G +YISTD VFDG R Sbjct: 67 PDWVVHCAALADLDACEKNSALSARLNANLPGEVAEACYRSGARLVYISTDAVFDG-ERG 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-YSIFGSNFL 159 E NP ++Y + K GE+ V ++ R + +S+ G L Sbjct: 126 GYREDDQPNPQSVYARDKWLGEQAVWQANPQAIVARVNFYGWSLLGQRSL 175 >gi|317488784|ref|ZP_07947317.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832150|ref|ZP_08165205.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] gi|316912089|gb|EFV33665.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486202|gb|EGC88655.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] Length = 723 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGRPDI---DLLKPKDFASFFLSFSPDVI 54 + L+IG +G + + + + E+ R G PD+ D ++ S F PD++ Sbjct: 235 LSVLLIGASGFLGTKMKQILSRSFEVAGTCRKGSPDLYALDPIRKNQVISLFDVVKPDIV 294 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N + E+A+ +N I +A D+ I+ISTDYVFDG + Sbjct: 295 VNLVGMSDPSACLSNQELAYDLNVRVVENICEACDAFDSKLIHISTDYVFDGEKIGMYET 354 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P N YG +KL E+ + S ++I+R +Y Sbjct: 355 DDSRLPKNYYGHTKLMAED-IVSALPRHLIVRVPILY 390 >gi|168003982|ref|XP_001754691.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694312|gb|EDQ80661.1| predicted protein [Physcomitrella patens subsp. patens] Length = 321 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 35/257 (13%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP----CIYISTDYVFD 105 +PDV+IN AA + E EPE A +IN + + + +G I++STD V+ Sbjct: 78 TPDVLINCAAISVPRACEQEPEAAKAINV--PTVLVQWLNDLGAAQPPFLIHLSTDQVYK 135 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G ++ +E T P+N YG++K+ E+ + S ++Y ILR++ +Y G + + + Sbjct: 136 G-DKSFYEEKDETKPVNTYGETKVMAEKYIQSNYDHYAILRSSIIY---GPQPFIPLPKT 191 Query: 166 AKERREISVVC---------DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + V+ D++ P + ++Q L+E +R ++ + Sbjct: 192 LPLQWIDGVLSSGSGADFFEDEYRCPV----YVKDVVQAIKLLMEKHFCGMRPMYLLLNI 247 Query: 217 GGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLDCSKLAN 270 GGP +S A AE + A+ G +K+ R + Q T +R P +D SK+ Sbjct: 248 GGPDRLSRAAMAETV----AQVRGYDTKLVRRVSSQ--TAVNRGVVSPPDISMDVSKIVA 301 Query: 271 THNIRISTWKEGVRNIL 287 N++++ + GV L Sbjct: 302 ELNMKMTDFATGVAMTL 318 >gi|330799032|ref|XP_003287552.1| hypothetical protein DICPUDRAFT_78411 [Dictyostelium purpureum] gi|325082416|gb|EGC35898.1| hypothetical protein DICPUDRAFT_78411 [Dictyostelium purpureum] Length = 459 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 7/124 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ K+ LSF+P II+ AA D+ E + E +N + + + IG Sbjct: 192 VDITNEKELEQVVLSFNPQYIIHCAAERRPDQCEKDKEHVRKLNVGTTEKLIELSVKIGA 251 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE------EKVASYTNNYVILRT 147 YIS+DYVFDG P + TNPL+ YG++K E K+ + Y+ILR Sbjct: 252 CLFYISSDYVFDG-KNPPYSIDAKTNPLSFYGETKRDSEIAILNAHKLHGDSFKYIILRV 310 Query: 148 AWVY 151 +Y Sbjct: 311 PVLY 314 >gi|78060715|ref|YP_367290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] gi|77965265|gb|ABB06646.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] Length = 314 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L F + P +I AA D E +P A +IN I A G Sbjct: 55 ELDVLDEPALEHLFATRQPAAVIICAAERRPDVCERDPAGARAINVTAQARIGALAARYG 114 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR ++ Sbjct: 115 AWTLGISTDYVFDGKA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLF 172 >gi|221212106|ref|ZP_03585084.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221168191|gb|EEE00660.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 316 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L F + P ++ AA D E +P A +IN + I A G Sbjct: 49 LDVLDRPALERAFDLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPARIGALAARYGA 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR +Y Sbjct: 109 WTLGISTDYVFDGRA-APYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLY 165 >gi|115449925|ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group] gi|48716437|dbj|BAD23044.1| putative dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica Group] gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza sativa Japonica Group] gi|215697942|dbj|BAG92141.1| unnamed protein product [Oryza sativa Japonica Group] Length = 317 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 21/248 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---IPCIYISTDYVFDGL 107 P VI+N AA + + E +P A + N + + S G I++STD V++G+ Sbjct: 74 PHVIVNCAAISVPRQCETDPAAAMATNVPSS--LVTWLLSFGNDNTLLIHLSTDQVYEGV 131 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLLS 161 ++ E T P+N+YGKSK+A E+ + +NY ILR++ +Y + S + Sbjct: 132 -KSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQW 190 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 M + + +++ D+F P + ++ + + + + + + + GGP Sbjct: 191 MDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADG----KAVQVLLNVGGPDR 246 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 VS AE + + RG +S + + P +D +KL I+ ++ Sbjct: 247 VSRLQMAESV---ADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISF 303 Query: 280 KEGVRNIL 287 ++GVR L Sbjct: 304 QDGVRATL 311 >gi|30678677|ref|NP_191965.2| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] gi|332656499|gb|AEE81899.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 327 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 23/249 (9%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA--- 166 + E T +N+YGKSK+A E + ++ ILR++ ++ + L L + Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQTVSPLPKTLPIQWID 198 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTADGGP- 219 K+ + D+F P + ++ I LI+ + D +R + + GGP Sbjct: 199 SSLKKGDTVDFFHDEFRCPI----YVKDLVNITFKLIDRWVSDDKQMRLVLNA---GGPE 251 Query: 220 -VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 +S A+ + + RG S + + PA +D +KL +T + ++ Sbjct: 252 RLSRVQMAQMV---AEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHTLELSPTS 308 Query: 279 WKEGVRNIL 287 +KEGVR L Sbjct: 309 FKEGVRLTL 317 >gi|192358864|ref|YP_001981257.1| dTDP-4-rhamnose reductase-like protein [Cellvibrio japonicus Ueda107] gi|190685029|gb|ACE82707.1| dTDP-4-rhamnose reductase-related protein [Cellvibrio japonicus Ueda107] Length = 289 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 8/195 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+D + +++ P+++IN A+ +D + + + A A Sbjct: 36 DVDWRHAESVSAYIQQKCPELVINNYAWDTLDTRDGQDAYLAAATHL-----AAACADAD 90 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 IP I++S VF G S++ E +P+ GK+ +A E+ +A ++ LR WV Sbjct: 91 IPLIHLSGYQVFSGNSKSTHSEKDNVDPVTAQGKTLVAAEQAIARLCPRHICLRLGWVIG 150 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 +G N L +L + + G PT+ +AR ++ + + SD GI H Sbjct: 151 AYGDNLLTRLLGGYLGGQAVQANRRLRGAPTTLADVARVLVGLYKQISCGSDN--WGIMH 208 Query: 213 MTADGGPVSWADFAE 227 + G + +FAE Sbjct: 209 YCS-GDACTQEEFAE 222 >gi|41033611|emb|CAF18472.1| dTDP-D-glucose-4,6-dehydratase [Thermoproteus tenax] Length = 320 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 8/132 (6%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS-FSPDVIINPAAYTAVDKAEDEPE 71 A L ++ +VE +R + +LL + LS F PDV++N AA T VD++ ++P Sbjct: 35 AGRLENLRGVEVEFVRGDVANFELL------FYVLSRFRPDVVVNFAAETHVDRSINDPA 88 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLA 130 + N G ++ +AA +G ++ISTD V+ L S DE P P + Y SK A Sbjct: 89 PFLTTNVWGVHSVLEAARKLGFLYVHISTDEVYGDLASGGEADESWPMRPSSPYSASKAA 148 Query: 131 GEEKVASYTNNY 142 G+ V +Y Y Sbjct: 149 GDLLVQAYGRTY 160 >gi|197294957|ref|YP_002153498.1| hypothetical protein BCAS0105 [Burkholderia cenocepacia J2315] gi|195944436|emb|CAR57038.1| putative exported protein [Burkholderia cenocepacia J2315] Length = 321 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 1/119 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L F P +I AA D E +P A +IN I A G Sbjct: 62 ELDVLDSPSLERLFEIHKPAAVILCAAERRPDVCERDPAAARAINVTAPARIGALAARYG 121 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG + P E + NPLNIYG++KL GE + + + +LR ++ Sbjct: 122 AWTLGISTDYVFDGKA-APYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLF 179 >gi|194708380|gb|ACF88274.1| unknown [Zea mays] Length = 322 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 21/265 (7%) Query: 35 DLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 DL F + SF P V++N AA + E +P A + N ++ S G Sbjct: 61 DLRSGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGN 118 Query: 94 P---CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I +STD V++G+ ++ E T P+N+YGKSK+A E+ + +NY ILR++ + Sbjct: 119 EDSLLIQLSTDQVYEGV-KSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSII 177 Query: 151 YS------IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 Y + S + M + + +++ D+F P + I+ + + Sbjct: 178 YGPQTISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDG 237 Query: 205 TSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 ++ + ++ GGP VS AE + + RG S + + P Sbjct: 238 KKVQVLLNV---GGPDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDIS 291 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 +D +KL I+ ++++GVR+ L Sbjct: 292 MDITKLTQILGIKPISFQDGVRSTL 316 >gi|328854011|gb|EGG03146.1| hypothetical protein MELLADRAFT_90437 [Melampsora larici-populina 98AG31] Length = 340 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 15/175 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDL +F P+++++ AA D AE +PE +N + + +A+ + Sbjct: 80 IDLRDTTAIEELIKNFKPNLLVHCAAERRPDVAEKDPEGTKQLNVDISKHLAELSKRYSF 139 Query: 94 PCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 IYI TDYVFDG D NP N+YG++KLAGE+ + +L + V Sbjct: 140 RLIYICTDYVFDGNAPEGGYDVNDKPNPTNLYGETKLAGEKAILDSGEKGQVL-SLRVPV 198 Query: 153 IFGS---------NFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIA 196 ++G N L+ ++ K + S+ D + T PT +A+ I Q+A Sbjct: 199 LYGKAERNDESAINILIDGVK--KSSQGYSIKMDDWATRYPTLVDDVAKVISQLA 251 >gi|159898981|ref|YP_001545228.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159892020|gb|ABX05100.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 286 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + P II+ AA T + +++N + + +A+ A + Sbjct: 48 DLADQAQLEALLEQIQPTAIIHTAAVTPAMGPAMTDQALWAVNVQASATLARWAAQHQVR 107 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--S 152 +++S+D V+ G + P P++ YG SK AGE VA+ I RT+ +Y + Sbjct: 108 LVHVSSDAVWGGREAAYTESDVPA-PIHPYGASKAAGEAVVAALDPQAAIARTSLLYGQN 166 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 N +++ L ER + + D+ P +A+A+I++A SL GIFH Sbjct: 167 PLDPNTTMALAMLRGERHGV-LFTDELRCPVFVEDVAQALIELAQK------PSLYGIFH 219 Query: 213 M 213 + Sbjct: 220 L 220 >gi|328885634|emb|CCA58873.1| dTDP-4-dehydrorhamnose reductase [Streptomyces venezuelae ATCC 10712] Length = 275 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 +++ A+G+ +A AA +GI +++S+D VF GL R DE +P+ YG +K AGE Sbjct: 76 WAVTADGSVHVAMAAARLGIRLVHVSSDAVFSGLGRARYDETCTPDPITPYGAAKAAGET 135 Query: 134 KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAII 193 V + ++RT+ + S + LA R+ ++ D P +A + Sbjct: 136 AVRILCPDAAVVRTSLIIGDGDSEHERVVHELAANERQGALFTDDIRCPIHVADLASGLW 195 Query: 194 QIAHNLIENSDTSLRGIFHMTA 215 ++A + G+FH+ Sbjct: 196 KLAA-------SGRAGVFHLAG 210 >gi|59710121|gb|AAW88568.1| putative epimerase/dehydratase [Streptomyces hygroscopicus subsp. jinggangensis] Length = 146 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ A+ + PD ++ + + E PE A++ + GA IA A D G Sbjct: 6 VDVTSGPQVAALMDAVEPDAVVAVHGPSDITWCESHPEEAYATHHGGARNIAAALD--GR 63 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 P + +STD VF G + E + T P+N YG++KLA E ++ T++ ++LR + VY Sbjct: 64 PVLLVSTDNVFSGEDES-YGESAQTFPVNAYGRAKLAAERELLD-TSSALVLRVSLVYGW 121 Query: 154 FGS----NFLLSMLRLAKERREISV 174 NFL S++R + ++ + Sbjct: 122 EDRGPRPNFLTSVVRSLMRKEQLRI 146 >gi|149377610|ref|ZP_01895348.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter algicola DG893] gi|149358083|gb|EDM46567.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter algicola DG893] Length = 292 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 12/231 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I+N + AE PE+A + A+A+ A I + +S+ YVFDG ++ Sbjct: 52 DLIVNALWLADPESAEKNPELAHKASFSLPVALAEHACEHNIALLQLSSSYVFDGRKQSA 111 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +P P N G + E+ + + ++ILRT W F+ + +A E Sbjct: 112 YIASNPGQPCNELGNWQWECEQALRTLLPRHIILRTGWSL----GRFVRKVQSVAAESDT 167 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 I + G P + +AR I I + + + G + A +S + I Sbjct: 168 IKLPGKCRGQPVTVSDLARVITAIVQQI--DCGAEVWGTYQY-AGAEDISLYELGLAI-- 222 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + RG P R+ + PA + + C+K+ NT ++ W+ G Sbjct: 223 -TGLRGIPDG--IRVVDETPAWATLEPANATMICTKIRNTFGVKQLPWRSG 270 >gi|15807714|ref|NP_285368.1| dTDP-4-rhamnose reductase-like protein [Deinococcus radiodurans R1] gi|6460559|gb|AAF12265.1|AE001862_91 dTDP-4-rhamnose reductase-related protein [Deinococcus radiodurans R1] Length = 247 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 4/148 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G +G++ L S+ EI+ +++L + PD+I++ AAYT Sbjct: 8 KMLLTGGSGRLGTELRSVIP---EIVAPSSAEMNLTAAAQVLAVVQRERPDIIVHAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V AE + E ++ N G +A AA+++G ++ISTDYVF G + +P + Sbjct: 65 NVGGAEKDREACWNANVVGTRNVAAAANAVGAKLVHISTDYVFSGEEGGYHESDTPGPVV 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAW 149 N Y +KL EE A ++ILRT++ Sbjct: 125 NYYSLTKLVAEE-AARAAQKHLILRTSF 151 >gi|322696186|gb|EFY87982.1| NAD dependent epimerase/dehydratase family protein [Metarhizium acridum CQMa 102] Length = 327 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 13/146 (8%) Query: 3 CLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD-IDLLKPK-------DFASFFLSFS 50 LV G G + + +++ Q DV+ I R D +D+LK + + Sbjct: 9 ALVTGATGLLGREITAAFRQSPKWDVKGIGYSRADGVDILKVNLENEDLNELNTVIDETK 68 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SR 109 P VI++ AA D+ + +PE A ++N + +A+ A S I IYISTDYVF G+ Sbjct: 69 PHVIVHSAAQRFPDRVDKDPEGARALNIAASRRLAQVALSRDILLIYISTDYVFPGIPGD 128 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKV 135 P + + P N+YG++K GE + Sbjct: 129 APYEADATPKPTNLYGQTKFDGERAI 154 >gi|237809595|ref|YP_002894035.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] gi|237501856|gb|ACQ94449.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] Length = 130 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 I R ++ ++ P+ + PDVIIN +T DKAE E + +++IN +G +A+ Sbjct: 10 ILADRDELGIIDPQAVIVRVKEYQPDVIINAVVHTVADKAETEIDASYAINRDGPKYLAE 69 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 AA S+G I+IS R E P P IYG SKLA Sbjct: 70 AAVSVGTAIIHISKTRFSSDKDRI-YSEADPVVPQGIYGTSKLAA 113 >gi|15922758|ref|NP_378427.1| hypothetical protein ST2425 [Sulfolobus tokodaii str. 7] gi|15623549|dbj|BAB67536.1| 238aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 238 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 4/135 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ ++ + P +A++IN A I +AA+ + +Y+ST +FDG + Sbjct: 37 PDVVIHTFEIPYLEANNNRP-LAWNINTWYAINIGRAANKVKAVNVYLSTFMIFDG-KKG 94 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR-LAKER 169 E S NP+N YG +KL GE + S NY+++R +YS+ L ++ + + + Sbjct: 95 YYSETSTPNPINYYGLTKLVGESGIMS-LGNYLVIRLGLLYSMQYKGLLFPFIKGILRGK 153 Query: 170 REISVVCDQFGTPTS 184 R I + + +P S Sbjct: 154 RTIKCNSNFYVSPIS 168 >gi|156050135|ref|XP_001591029.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980] gi|154692055|gb|EDN91793.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980 UF-70] Length = 315 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 20/199 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + P V+I+ AA DK +++PE ++N + ++AK + I Sbjct: 46 DLASESEVSKVLDESKPQVVIHCAANRFPDKCDNDPEGTRALNIAASASLAKLCAAQSIL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILRT 147 IYISTDYVF G P + P N+YG++K GE+ V A + V+LR Sbjct: 106 LIYISTDYVFPGTEGDAPYETSHSPKPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRV 165 Query: 148 AWVY-------SIFGSNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHN 198 +Y S G L++ + A+E ++ +V D + PT+ I R + IA Sbjct: 166 PVLYGEGEPEESAIG--VLINSVWKAQE-KDANVKMDHWAIRYPTNTEDIGRVLSDIAIK 222 Query: 199 LIENSD-TSLRGIFHMTAD 216 +E+ + +SL I +++ Sbjct: 223 YLESKEPSSLPRILQFSSE 241 >gi|188586990|ref|YP_001918535.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351677|gb|ACB85947.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 314 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 5/117 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 +D +S FL P +I+ AA +V K+ ++PE IN G + + A + G+ +Y Sbjct: 66 EDLSSIFLKEKPHYVIHMAAQVSVSKSLEDPEEDAKINLMGGLNLLQEASNNGVEKFVYA 125 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 ST V+ S P+ E PL+ YG +KLA E+ + SY N Y +LR A VY Sbjct: 126 STAAVYGDPSELPLKEEHEKKPLSPYGINKLAFEQYLESYRVNLGMDYTVLRYANVY 182 >gi|309274401|gb|ADO63823.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas chloritidismutans] Length = 294 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP PDV++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPAQGWDAASLTQLLDDNRPDVVVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E A + +A+ + S+ VFDG T E P Sbjct: 63 YDWFQSGQPNEPALAAQERAVERLAELCQHHDFVLLQPSSYRVFDGARTTAYSEKDEVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ G++ E+ V S +V+LR W+ L +L+ ++ I + D+ G Sbjct: 123 LDARGRALWRIEQSVRSLCPRHVLLRFGWLLDDSRDGVLGRVLQRLEQSEAILLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + L G +H A+ + E+ + R Sbjct: 183 NPTPVDDAARVILAVLKQL--DCQAPLWGTYHYGGHEASTPLL-VAQALLGEAGKYRDVT 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + A + L C K+ T I+ W+ G+ ++L Sbjct: 240 TANLTAVAHAACSDAAAEAQHGVLACKKIFTTFGIKPRAWRTGLPSLL 287 >gi|297810115|ref|XP_002872941.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318778|gb|EFH49200.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 17/264 (6%) Query: 34 IDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSI 91 +DL F S F PDV++N AA + E +P+ A SIN + + Sbjct: 59 VDLKSGLGFNSISQDFGQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSTFERN 118 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I++STD V++G+ ++ E T +N+YGKSK+A E + N+ ILR++ + Sbjct: 119 KTLLIHLSTDQVYEGV-KSFYKEEDETVAVNVYGKSKVAAELLIKDKCQNFAILRSSIIV 177 Query: 152 SIFGSNFLLSMLRLA------KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 + L L + K+ + D+F P + +++ + + + Sbjct: 178 GPQTVSPLPKTLPIQWIDSSLKKGDTVEFFHDEFRCPIYVKDLVNITLKLIDRWVVSDEK 237 Query: 206 SLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 ++ + + GGP +S A+ + + RG S + + PA + Sbjct: 238 QMQLVLNA---GGPERLSRVQMAQVV---AEVRGYDMSLIKHVSASSVDRGVVSPADISM 291 Query: 264 DCSKLANTHNIRISTWKEGVRNIL 287 D +KL T I +++K+GVR L Sbjct: 292 DITKLIQTLEITPTSFKDGVRLTL 315 >gi|328543412|ref|YP_004303521.1| NAD dependent epimerase/dehydratase family [polymorphum gilvum SL003B-26A1] gi|326413157|gb|ADZ70220.1| NAD dependent epimerase/dehydratase family [Polymorphum gilvum SL003B-26A1] Length = 289 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGR--PDIDLLKPKDFASFFLSF-SPDVIIN 56 M+ L+ G GQ+ + +++ +D +++ +GR PD P D A ++ + D +++ Sbjct: 1 MRILLTGGTGQVGRFVAARLARDGHDLVFLGRRAPDAGRFVPWDLADDPMNLPAADALVH 60 Query: 57 ------PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLS 108 P + + D+PE N EG+ + AA ++GI C+++S+ V+ DG Sbjct: 61 CALQHVPGRFRGGEG--DDPEQFVQANLEGSERLFAAAKAVGIGRCVFLSSRAVYGDGRC 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSI 153 + E P P +YG+ KL GE ++ + ++ ++LR VY + Sbjct: 119 GETLREDDPAEPDTLYGRVKLEGERRLQALCDDGFCGLVLRATGVYGL 166 >gi|300313503|ref|YP_003777595.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum seropedicae SmR1] gi|300076288|gb|ADJ65687.1| dTDP-4-dehydrorhamnose reductase protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 37/234 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-----VEIIR-----VGRP---DIDLLKPKDFASFFL 47 MK LV+G +G I +++ + Q I+R VG P IDL F Sbjct: 1 MKVLVLGASGMIGRTMFHVLSQRPGWEVCAIVRAKTFEVGAPVVTGIDLSNQDHMERLFA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV++N A T + A ++NA +A+ D I++STD VF G Sbjct: 61 QRRPDVVVNCAGLTKHLPEGNAHIPALTMNALLPHRLAQLCDIADARLIHVSTDCVFSGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + ++ +P + ++YG++K GE N + LRT+ + G+ F L LA+ Sbjct: 121 AGNYKEQDTP-DATDVYGRTKALGE----VTAGNALTLRTSTIGHEHGTQFGLLEWFLAQ 175 Query: 168 ERREISVVCDQF------GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + C F G PT ++ AR + I D+SL+G++H+ A Sbjct: 176 TQ------CKGFRHAIFSGLPT--VEFARVVRDIV-----IPDSSLKGLYHVGA 216 >gi|47221410|emb|CAF97328.1| unnamed protein product [Tetraodon nigroviridis] Length = 315 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 61/139 (43%), Gaps = 22/139 (15%) Query: 28 RVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP I DL + PDV+I+ AA E P + G + Sbjct: 61 RRARPGILRCDLTDGDAVRGLLQDYKPDVVIHCAA-------ERRPRCGGEAHRSGCESK 113 Query: 85 A--------KAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 K A + G +YISTDYVFDG + P E NPLN+YG+SKL GE++ Sbjct: 114 TCTPPAHSPKEAAACGAFFLYISTDYVFDGRN-PPYGEDDTPNPLNVYGRSKLEGEQETL 172 Query: 137 SYTNNYVILRTAWVYSIFG 155 V+LR V +FG Sbjct: 173 RCCPGAVVLR---VPVLFG 188 >gi|171184951|ref|YP_001793870.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus neutrophilus V24Sta] gi|170934163|gb|ACB39424.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus neutrophilus V24Sta] Length = 279 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 25/240 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AAYT VD E + A+ N A +YISTDYVFDG R Sbjct: 57 DVVVHAAAYTDVDGCEVDRARAYRANF----LATLAVARAARRVVYISTDYVFDG-ERGM 111 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKE 168 E NP+N YG SKL GE V + V++R + ++ + NF + L + Sbjct: 112 YREGDVPNPVNYYGLSKLLGEGPVLA--RGGVVVRVSGLFGVSPHGKRNFGVEALLRLRR 169 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E+ DQ +PT + +A L + + + G+ H+ G P + +FA Sbjct: 170 GEEVRAFVDQRLSPTY-------VPFLAERLADLLERDVEGVLHIA--GEPATRFEFAVA 220 Query: 229 IFWE-SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + +RG K R+ + A RP S LD S+ A + + + +E +R+ + Sbjct: 221 LAEALGVDRG--LVKPARL--SEARLAARRPRDSSLDTSR-AASMGLSLPPLREALRHFV 275 >gi|184201349|ref|YP_001855556.1| putative dTDP-4-dehydrorhamnose reductase [Kocuria rhizophila DC2201] gi|183581579|dbj|BAG30050.1| putative dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Kocuria rhizophila DC2201] Length = 228 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 16/148 (10%) Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 + K AGE + + +YVI RT+WV G NF+ +M RLA++ SVV Q G T+A Sbjct: 58 QPKPAGETALRACPRHYVI-RTSWVIG-EGMNFVATMARLAEQGVGPSVVAHQHGRLTAA 115 Query: 186 LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR 245 +A + +L+++ + G +H+T G P +WA A ++F + G ++V Sbjct: 116 ADLAAGVP----HLVDSG--APYGTYHLTGSGEPCTWAQVARWVF---EDLGHDPARVTP 166 Query: 246 IFTKQYPT----KAHRPAYSCLD-CSKL 268 + T +Y A RP S LD CS L Sbjct: 167 VSTAEYNGGTNDGAPRPVNSVLDLCSIL 194 >gi|88858284|ref|ZP_01132926.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] gi|88819901|gb|EAR29714.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] Length = 296 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 8/150 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII-----RVGRP--DIDLLKPKDFASFFLSFSPDVI 54 K ++ G +G + ++L + E+I R P ++L + F ++ P + Sbjct: 3 KIMITGASGLLGRALFNTFSDHFEVIGTAFSRASEPLVPLNLTDFRALEDFLITHKPHYL 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 I+ AA + + PE+ +N A+A + +IS+DYVFDG S P E Sbjct: 63 IHAAAERRPEVCLENPELTQQLNVSLPAALANLCHQHQVELFFISSDYVFDGTS-PPYAE 121 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + PLN YG SK E+ V +Y + V+ Sbjct: 122 TAQPAPLNDYGISKYQAEQAVLAYPQHNVV 151 >gi|171184952|ref|YP_001793871.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934164|gb|ACB39425.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] Length = 320 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 8/132 (6%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS-FSPDVIINPAAYTAVDKAEDEPE 71 A L ++ +VE +R + +LL + LS F PDV++N AA T VD++ ++P Sbjct: 35 AGRLENLRGVEVEFVRGDVANFELL------FYVLSRFRPDVVVNFAAETHVDRSINDPA 88 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLA 130 + N G ++ +AA +G ++ISTD V+ L+ DE P P + Y SK A Sbjct: 89 PFLTTNVWGVYSVLEAARRLGFLYVHISTDEVYGDLAGGGEADESWPMRPSSPYSASKAA 148 Query: 131 GEEKVASYTNNY 142 G+ V +Y Y Sbjct: 149 GDLLVQAYGRTY 160 >gi|46203690|ref|ZP_00051143.2| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 225 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 25/183 (13%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PDV++N + ++P +A INA +A+ AD +G ++ISTD VF G Sbjct: 1 MRPDVVLNCVGIVKQLASAEDPLVAIPINAILPHRLARLADLVGARLVHISTDCVFTG-R 59 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN------FLLSM 162 + E ++ ++YG+SKL GE Y N V LRT+ + GS FL Sbjct: 60 KGDYRESDASDAEDLYGRSKLLGE---VDYPNA-VTLRTSIIGREVGSRNGLVEWFLSQS 115 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 R+ R+ I F T+ ++AR IA +++ N D LRG++H++ D P+S Sbjct: 116 GRVRGYRKAI------FSGLTTD-ELARV---IAEHVLPNPD--LRGVYHVSVD--PISK 161 Query: 223 ADF 225 D Sbjct: 162 FDL 164 >gi|145590601|ref|YP_001152603.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] gi|145282369|gb|ABP49951.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] Length = 299 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 58/104 (55%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AAY +V+++ ++P NA + K A +G +Y+S+ V+ TP Sbjct: 63 DAVVHAAAYISVEESWEKPYEYMWNNAAVTAKVGKEALRMGAYLVYLSSAAVYGNPVYTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 IDE PT P + YG SKLAGEE +A + + A +++++G Sbjct: 123 IDEEHPTRPTSPYGLSKLAGEEALALLQSAGLKYAVARLFNVYG 166 >gi|332656502|gb|AEE81902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 331 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 27/253 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA--- 166 + E T +N+YGKSK+A E + ++ ILR++ ++ + L L + Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQTVSPLPKTLPIQWID 198 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTADGGP- 219 K+ + D+F P + ++ I LI+ + D +R + + GGP Sbjct: 199 SSLKKGDTVDFFHDEFRCPI----YVKDLVNITFKLIDRWVSDDKQMRLVLNA---GGPE 251 Query: 220 -VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLDCSKLANTHNI 274 +S A+ + + RG S + + + R PA +D +KL +T + Sbjct: 252 RLSRVQMAQMV---AEVRGYDLSLIKHVSASSLFCQIDRGVVSPADISMDITKLIHTLEL 308 Query: 275 RISTWKEGVRNIL 287 +++KEGVR L Sbjct: 309 SPTSFKEGVRLTL 321 >gi|118486138|gb|ABK94912.1| unknown [Populus trichocarpa] Length = 300 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%) Query: 73 AFSINAEGAGAIAKAADSIGIPC----------------IYISTDYVFDGLSRTPIDEFS 116 F A G AA SI +PC I++STD V++G+ ++ E Sbjct: 67 GFQSIASKFGQDPDAAMSINVPCSLVNWLSSFEERDTLLIHLSTDQVYEGV-KSFYKEED 125 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR---------LAK 167 T P+N+YGKSK+A E+ ++ NY ILR++ IFG + + + + Sbjct: 126 ETVPVNVYGKSKVAAEQFISKTWPNYAILRSSI---IFGPQTISPVQKSLPIQWIDGVLS 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHN-LIENSDTSLRGIFHMTADGGP--VSWAD 224 ++ ++ D+F P + I+ + + +IE L + GGP VS Sbjct: 183 KKEQVEFFHDEFRCPVYVKDVVTIILSLINKWIIEGKQMKL-----LLNVGGPDRVSRVQ 237 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE + + RG S + ++ PA +D SKL T +I +++++GV Sbjct: 238 MAETV---AHVRGYNTSLIKQVSASSVYRGVSSPADISMDISKLIQTVSISPTSFRDGV 293 >gi|282164741|ref|YP_003357126.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] gi|282157055|dbj|BAI62143.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] Length = 288 Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 6/161 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ D A P +I ++V+ E A N G +A+ S+ Sbjct: 42 DIKNSADVARVVKQAKPQHLILTEEISSVEYCEKNRLDAMEFNTRGTRFFVEASSSLRPR 101 Query: 95 CIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 IY+S+ +VFDG R P E NP+N+YG++KL GE V +++ LR VY Sbjct: 102 VIYLSSAFVFDG--RKPGGLYAEHDHVNPINVYGETKLMGEVAVDK-AADHITLRLGDVY 158 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI 192 F NF+ ++ ++I + D + +P +A+A+ Sbjct: 159 GNFSDNFVNFVVSSLNYGQKIELARDMYFSPIYIEDVAKAV 199 >gi|119499101|ref|XP_001266308.1| NAD dependent epimerase/dehydratase family protein [Neosartorya fischeri NRRL 181] gi|119414472|gb|EAW24411.1| NAD dependent epimerase/dehydratase family protein [Neosartorya fischeri NRRL 181] Length = 314 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP+D + P ++I+ AA + D + PE A +N + +A+ + Sbjct: 46 DLEKPEDIKNLLDEAKPQIVIHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKAL 105 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G P + + +P N YG+ K GE V T ++LR + Sbjct: 106 LVYISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKETGLGIVLRVPVL 165 Query: 151 YSIFGSN 157 Y +N Sbjct: 166 YGTAQNN 172 >gi|255596397|ref|XP_002536525.1| dtdp-dehydrorhamnose dehydrogenase, putative [Ricinus communis] gi|223519382|gb|EEF25857.1| dtdp-dehydrorhamnose dehydrogenase, putative [Ricinus communis] Length = 241 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 7/152 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D++++ AA T V++ E +P+ + N +A+AA G+ +++S+ ++ S P Sbjct: 65 DLLLHAAANTNVEQCETDPDACYRDNFLLTELLAQAAAIAGVRMLFVSSTGLYGTGSDAP 124 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS---NFLLSML----R 164 E+ P + +SKL GE+ V + + +++RT W++ S NF+ + + Sbjct: 125 YHEYDAAAPTTHHHRSKLLGEQAVLAGARDNLVVRTGWLFGGAASAAKNFVARRIDEARK 184 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIA 196 A E R I +Q G P +A ++ +A Sbjct: 185 AAAEGRHIESNAEQRGVPCWNRDVAMRMLDLA 216 >gi|119182893|ref|XP_001242546.1| hypothetical protein CIMG_06442 [Coccidioides immitis RS] Length = 332 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 82/308 (26%), Positives = 123/308 (39%), Gaps = 57/308 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-------PDI---DLLKPKDFASFFLSFS 50 K LV G +G + + + + +DV VG+ PDI DL P + S Sbjct: 3 QKALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPDIVKADLTNPSEIESLLDEVK 62 Query: 51 PDVII-------------------NPAAYTAVD-KAEDEPEIAFSINAEGAGAIAKAADS 90 P V++ N + ++++ + P F I + A+AKA Sbjct: 63 PQVVVHCESSLFIPMVLFVSEAGRNSSMISSIETRCNQAPPTDFQITTK---ALAKATLQ 119 Query: 91 IGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILR 146 I IYISTDYVF G P + S T P NIYG++KL GE V T V+LR Sbjct: 120 RSILLIYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLR 179 Query: 147 TAWVY------SIFGSNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHN 198 +Y S N L+ + A++ + V D +G PT+ + R IA Sbjct: 180 VPVLYGSADTNSESAVNVLIDAVWKAQD-ADAKVKMDDWGQRYPTNTEDVGRVCHDIAVK 238 Query: 199 LIENSD--TSLRGIFHMTADGGPVSW---ADFAEYI-----FWESAERGG-PYSKVYRIF 247 + + S I +++ + FAE + E ++GG P + V R F Sbjct: 239 YLGEQERAASFPTILQFSSEDKVTKYEMCERFAEILGLPLSGMERIKQGGTPGNGVQRPF 298 Query: 248 TKQYPTKA 255 TKA Sbjct: 299 DTHLSTKA 306 >gi|170290383|ref|YP_001737199.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174463|gb|ACB07516.1| NAD-dependent epimerase/dehydratase [Candidatus Korarchaeum cryptofilum OPF8] Length = 311 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 4/120 (3%) Query: 40 KDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 +DF S F +V II+ AA ++D+A P++AF N G + + A + + + Sbjct: 54 RDFNSIFEGIKGEVEGIIHLAAIVSLDEARANPKLAFETNFLGTLNMLELARKLDVGRFV 113 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 Y S+ V+ PIDE P P N+YG SKL GE+ SY Y I A Y +++G Sbjct: 114 YASSVAVYGEPVYLPIDESHPLKPANLYGLSKLMGEQLAMSYMEEYGIDVVALRYFNVYG 173 >gi|161523066|ref|YP_001585995.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189348108|ref|YP_001941304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|160346619|gb|ABX19703.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189338246|dbj|BAG47314.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] Length = 333 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 20/167 (11%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGR---------------PD----IDLLKPKDFAS 44 LVIG +G + +++ + +D + PD +D+L Sbjct: 14 LVIGASGLLGRAVVASLARDPAFATIATIRNRDTRGARLLALPPDKIAILDVLDRPALER 73 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + P ++ AA + E +P A +IN + I A G + ISTDYVF Sbjct: 74 AFDLYRPAAVVVCAAERRPNVCERDPAGARAINVDAPARIGALAARYGAWTLGISTDYVF 133 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 DG + P E + NPLN+YG++KL GE + + + +LR +Y Sbjct: 134 DGRA-APYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLY 179 >gi|15605986|ref|NP_213363.1| spore coat polysaccharide biosynthesis protein SpsK [Aquifex aeolicus VF5] gi|2983168|gb|AAC06769.1| spore coat polysaccharide biosynthesis protein SpsK [Aquifex aeolicus VF5] Length = 137 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 16/133 (12%) Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G NF+ +++R AK + VV D + +PT L A+ I +I L+EN GI+H+T Sbjct: 11 GGNFVYTIIRKAKAGEPLRVVDDIYMSPTYTLDAAKEIWKI---LLENKPY---GIYHVT 64 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 + G SW +FA I E G + + + ++ TKA+RP + S LA+ I Sbjct: 65 -NSGYCSWYEFAVKIL----EYSGLKTDIKPVRHTEFKTKANRPLW-----SPLASKRGI 114 Query: 275 RISTWKEGVRNIL 287 ++ W+E +++ + Sbjct: 115 KLRNWEEALKDFI 127 >gi|258571309|ref|XP_002544458.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237904728|gb|EEP79129.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 267 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 90/217 (41%), Gaps = 24/217 (11%) Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLN 122 D+ + P++A ++N E A+A+A S I IYISTDYVF G P + T P N Sbjct: 27 DQCDANPDLARNVNVEATKALAEATLSRDILLIYISTDYVFPGRPGEAPYEASMQTEPPN 86 Query: 123 IYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGS------NFLLSMLRLAKERREIS 173 IYG++K GE V T VILR +Y S N L+ ++ A++ Sbjct: 87 IYGQTKRDGEIAVLETTKGTGKGVILRIPVLYGSANSNSDSAVNVLIDAVQKAQDAN-AQ 145 Query: 174 VVCDQFGT--PTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPVSW---ADFA 226 V D + PT+ + R IA + D SL I T++ + FA Sbjct: 146 VKMDDWSVRYPTNTEDVGRVCHDIAVKYLGEQDKAGSLPTILQFTSEDKVTKYEICKRFA 205 Query: 227 EYI------FWESAERGGPYSKVYRIFTKQYPTKAHR 257 E + + G P V R + TK R Sbjct: 206 EILGLPLSGMERVKQSGTPGEGVQRPYDTHLSTKGLR 242 >gi|326491931|dbj|BAJ98190.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 320 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 21/248 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---IPCIYISTDYVFDGL 107 P VI+N AA + E +P A + N + + + S G I++STD V++G+ Sbjct: 77 PHVIVNCAAISVPRACEMDPAAAMATNVPSS--LVDWSLSFGNDKTLLIHLSTDQVYEGV 134 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLLS 161 ++ E T P+N+YGKSK+A E+ V +NY ILR++ +Y + S + Sbjct: 135 -KSFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQTVSPVEKSLPIQW 193 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 M + + +++ D++ P I I+ + + + + +R + ++ GG Sbjct: 194 MDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDG-KKIRVLLNV---GGADR 249 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 VS AE + + RG S + + P +D +KL T I+ T+ Sbjct: 250 VSRLQMAESV---AEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLTQTLGIKPITF 306 Query: 280 KEGVRNIL 287 +GVR L Sbjct: 307 LDGVRATL 314 >gi|303289653|ref|XP_003064114.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454430|gb|EEH51736.1| predicted protein [Micromonas pusilla CCMP1545] Length = 340 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 10/147 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPC-IYISTDYVFDGLS 108 D+I+N AA ++ E A ++N A+ A+++IG P I++STD V+ G Sbjct: 75 DLIVNCAAASSPGWCEKNETAATALNVPSKLLDAMTAASETIGEPLLIHMSTDQVYGGDE 134 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV------YSIFGSNFLLSM 162 R ++ P NP+N Y +SKL GEE+VA +VI R + + Y+ L Sbjct: 135 RRSTEDQCPANPVNAYARSKLKGEEEVAKRWAKHVIFRPSIITGPQPPYAPVNRPLFLDF 194 Query: 163 LRLA-KERREISVVCDQFGTPTSALQI 188 + A K + + D++ +P A I Sbjct: 195 IVDALKGTKPVGFFVDEWRSPVCAHDI 221 >gi|41054187|ref|NP_956111.1| dTDP-D-glucose 4,6-dehydratase [Danio rerio] gi|29436945|gb|AAH49462.1| TDP-glucose 4,6-dehydratase [Danio rerio] Length = 274 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F + DV+ + AA T V+ + P +N +G + +AA + Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRAALEASVQ 124 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 IYISTD V+ P DE SP P N Y +SK A E V SY + VI R++ Sbjct: 125 RFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSN 184 Query: 150 VY 151 VY Sbjct: 185 VY 186 >gi|153875697|ref|ZP_02003382.1| dTDP-4-dehydrorhamnose reductase [Beggiatoa sp. PS] gi|152067840|gb|EDN66619.1| dTDP-4-dehydrorhamnose reductase [Beggiatoa sp. PS] Length = 179 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 7/106 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D++++ A+T+ E PE A +N G G I K + I IYISTDYVF G + Sbjct: 52 DLLLHAGAFTSPPLVEKAPEKAIDVNIIGTGNIVKLCIANQIKLIYISTDYVFKG-DQGN 110 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 E + P+N Y SKL GE V Y +N +I+RT+ FG N Sbjct: 111 YKEEASIYPVNKYAWSKLGGECAVQMY-DNALIIRTS-----FGPN 150 >gi|226291193|gb|EEH46621.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb18] Length = 323 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 9/139 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D EII+ DL + + P V+++ AA DK + + + A IN Sbjct: 49 DAEIIKA-----DLTDESEIVALLDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAATK 103 Query: 83 AIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++A+ + I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 104 SLARETSARSILLIYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQ 163 Query: 142 Y---VILRTAWVYSIFGSN 157 V+LR +Y N Sbjct: 164 SGLGVVLRVPVLYGPTKQN 182 >gi|39947805|ref|XP_363047.1| hypothetical protein MGG_08631 [Magnaporthe oryzae 70-15] gi|145010254|gb|EDJ94910.1| hypothetical protein MGG_08631 [Magnaporthe oryzae 70-15] Length = 335 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + P V+++ AA DK + +PE +N ++A+ + Sbjct: 53 DLANEAEVEKVLDQVKPHVVVHCAANRFPDKVDQDPEGTRRLNVAATASLARLCADRDVA 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 IYISTDYVF G P + T P N+YG++KL GE+ V Sbjct: 113 LIYISTDYVFSGRPGEAPYAAGAATGPTNLYGQTKLDGEKAV 154 >gi|224013959|ref|XP_002296643.1| Hypothetical protein THAPSDRAFT_8901 [Thalassiosira pseudonana CCMP1335] gi|220968693|gb|EED87038.1| Hypothetical protein THAPSDRAFT_8901 [Thalassiosira pseudonana CCMP1335] Length = 378 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 21/139 (15%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 ++LL K +SF + PD+I++ AA D E E +F +N + +A+ Sbjct: 71 LNLLDHKATSSFLQTHRPDIIVHCAAERYPDAFEQNVEASFQLNVDATKFLAQECLRHGK 130 Query: 89 ----DSIGIP-CIYISTDYVFDG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D +P IYIST YVFDG L P S NPLN YG+SK GE V Sbjct: 131 ATEKDRSTLPKLIYISTSYVFDGGVSSLVYPPYKPDSKVNPLNNYGRSKWEGECAVRDVL 190 Query: 140 N-------NYVILRTAWVY 151 N +I+R +Y Sbjct: 191 NVAEEGDGQGIIVRVPLLY 209 >gi|6002289|emb|CAB56751.1| putative dTDP-4-dehydrorhamnose reductase [Acidianus ambivalens] Length = 232 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 21/187 (11%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I + G++A++L++ D E I + P K + + P+++I+ ++ Sbjct: 4 ITDEGELARALTNAI--DDEFIFIDSP------KKVYET-----KPEIVIH-----TLED 45 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 + P + +++N A IAKAA+ IG +Y ST ++DG R E S +PLN YG Sbjct: 46 NSNNPSM-WNLNTWFAINIAKAANKIGSLNVYFSTFMIYDG-KRGYYSETSTPSPLNYYG 103 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 +KL GE +AS NY+ILR VYS L +++ ++ + + +P S Sbjct: 104 MTKLVGETAIAS-LGNYLILRLGAVYSPSYRGILFHIIKALIKKGIAKCNTNLYLSPISV 162 Query: 186 LQIARAI 192 +A A+ Sbjct: 163 KDVAYAV 169 >gi|322703758|gb|EFY95362.1| NAD dependent epimerase/dehydratase [Metarhizium anisopliae ARSEF 23] Length = 235 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 4/113 (3%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 V+I++V + DL + + P VI++ AA D+ + +P+ A S+N + Sbjct: 45 VDILKVNLENEDL---NELNTVLDETQPHVIVHSAAQRFPDRVDKDPDGARSLNIAASRR 101 Query: 84 IAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 +A+ A S I IYISTDYVF G+ P + + P N+YG++K GE + Sbjct: 102 LAQVALSRDILLIYISTDYVFPGIPGDAPYEADATPKPTNLYGQTKFDGERAI 154 >gi|303257280|ref|ZP_07343294.1| putative methionine adenosyltransferase 2 subunit beta [Burkholderiales bacterium 1_1_47] gi|302860771|gb|EFL83848.1| putative methionine adenosyltransferase 2 subunit beta [Burkholderiales bacterium 1_1_47] Length = 298 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 63/144 (43%), Gaps = 3/144 (2%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPID 113 I A Y D PEIA N +Y STD+VFD + P Sbjct: 76 IYTAGYIKPDDCLKNPEIAIRNNVLAILDFLNENRKFIDSLVYTSTDFVFDTNENGEPHK 135 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAKERRE 171 E NP+N YG KLA E+ V SY N V L + S+ S+F+ + R+ K+R Sbjct: 136 ETDEPNPINFYGAIKLACEKIVNSYGYNVVRLPFMFGRSLNPHKSHFIEHVERVIKDRDS 195 Query: 172 ISVVCDQFGTPTSALQIARAIIQI 195 V+CD + +A+ II++ Sbjct: 196 FEVLCDYYENSLDYNTVAKIIIEL 219 >gi|254255188|ref|ZP_04948504.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] gi|124900925|gb|EAY71675.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] Length = 321 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L F + P +I AA D E +P A +IN + IA A Sbjct: 63 LDVLDEPALERLFDARKPAAVIICAAERRPDVCERDPAAARAINVDAPARIAALAARYDA 122 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ISTDYVFDG S P E + NPLN+YG++KL GE + + + +LR +Y Sbjct: 123 WTLGISTDYVFDG-SAAPYREDAAPNPLNVYGRTKLEGEAALLAASPRSCVLRVPLLY 179 >gi|225376376|ref|ZP_03753597.1| hypothetical protein ROSEINA2194_02017 [Roseburia inulinivorans DSM 16841] gi|225211752|gb|EEG94106.1| hypothetical protein ROSEINA2194_02017 [Roseburia inulinivorans DSM 16841] Length = 261 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 9/165 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G G + L ++++E + P I + + DVII+ AA Sbjct: 1 MKILITGARGFVGARL----MKELEGA-IAAPSIQGMNEEQIKRIVEESEADVIIHTAAI 55 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + V E PE ++ N +A ++D + C S+D V+ G P Sbjct: 56 SDVGTCEKTPEASYHANVLLPVYLANSSDGRKLICF--SSDQVYRGCESDGQYREDEAKP 113 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--SNFLLSML 163 NIYG KL E++V + V+LR W+Y N+LL++L Sbjct: 114 ANIYGAHKLEMEQRVLDRQPDSVMLRAEWMYDYISPRGNYLLNVL 158 >gi|224032413|gb|ACN35282.1| unknown [Zea mays] Length = 330 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 60/251 (23%), Positives = 110/251 (43%), Gaps = 18/251 (7%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYISTDYVFD 105 F P V++N AA + E +P A + N ++ S G I +STD V++ Sbjct: 80 FQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGNEDSLLIQLSTDQVYE 137 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFL 159 G+ ++ E T P+N+YGKSK+A E+ + +NY ILR++ +Y + S + Sbjct: 138 GV-KSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQTISPVAKSLPI 196 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN-LIENSDTSLRGIFHMTADGG 218 M + + +++ D+F P + I+ + ++ + + + GG Sbjct: 197 QWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHASDDGKKVQVLLNVGG 256 Query: 219 P--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 P VS AE + + RG S + + P +D +KL I+ Sbjct: 257 PDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQILGIKP 313 Query: 277 STWKEGVRNIL 287 ++++GVR+ L Sbjct: 314 ISFQDGVRSTL 324 >gi|302669946|ref|YP_003829906.1| dTDP-4-dehydrorhamnose reductase RfbD2 [Butyrivibrio proteoclasticus B316] gi|302394419|gb|ADL33324.1| dTDP-4-dehydrorhamnose reductase RfbD2 [Butyrivibrio proteoclasticus B316] Length = 269 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 9/162 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G G + L +C V + +D +K D I+N AA + + Sbjct: 3 LVTGTTGFVGSKLMKICKDVVAAPSLRNASLDHIK-----RIVSESGADTIVNTAAISDI 57 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 + + PE ++ N + +AKA + + C S+D V+ GL NP NI Sbjct: 58 GECQKNPESSYIANVQLPVFLAKACEGRKLICF--SSDQVYGGLEDNGPYTEENVNPANI 115 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIF--GSNFLLSML 163 Y K KL E++V + V+LR W+Y + SN+ ++++ Sbjct: 116 YAKYKLEMEQRVLDICPDAVMLRAEWMYDYYVKKSNYYMNIV 157 >gi|295659929|ref|XP_002790522.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb01] gi|226281699|gb|EEH37265.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb01] Length = 323 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 9/139 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D EII+ DLL + P V+++ AA DK + + + A IN Sbjct: 49 DAEIIKA-----DLLDESEIVVLLDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAATK 103 Query: 83 AIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++ + + I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 104 SLVRETSARSILLIYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQ 163 Query: 142 Y---VILRTAWVYSIFGSN 157 V+LR +Y N Sbjct: 164 SGLGVVLRVPVLYGPTKQN 182 >gi|242063580|ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor] gi|241932910|gb|EES06055.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor] Length = 325 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 21/248 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYISTDYVFDGL 107 P V++N AA + E +P A + N ++ S G I++STD V++G+ Sbjct: 82 PHVVVNCAAMSVPRACEMDPPAAMATNV--PSSLVNWLLSFGNEDSLLIHLSTDQVYEGV 139 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA- 166 ++ E T P+N+YGKSK+A E+ + +NY ILR++ +Y + + L + Sbjct: 140 -KSFYKEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYGPQTISPVAKSLPIQW 198 Query: 167 -----KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 + +++ D+F P + I+ + + N + + + GGP Sbjct: 199 IDGVLSQGQQVEFFNDEFRCPVYVKDMVDVILSLTKTWLSNGEK----VQVLLNVGGPDR 254 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 VS AE + + RG + + P +D +KL I+ ++ Sbjct: 255 VSRLQMAESV---AVVRGYDPRIIKSVSASSVNRGVASPPDISMDITKLTQILGIKPISF 311 Query: 280 KEGVRNIL 287 ++GVR+ L Sbjct: 312 RDGVRSTL 319 >gi|88798950|ref|ZP_01114532.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] gi|88778430|gb|EAR09623.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] Length = 302 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 16/291 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G +GQ+ +L++ + EI D L P+ + + + + + + Sbjct: 11 LILGADGQVGAALTAY-LDSREIPYRAIATADALDPEKLRTILAAPANERFVANLLF--- 66 Query: 64 DKAEDEPE-IAFSINAEGAGAIAKAADSIGI----PCIYISTDYVFDGLSRTPIDEFSPT 118 +EPE + SI+ A A A+ G + +S+ VF G S E Sbjct: 67 ----EEPEHFSQSIDDTWQAAAALIAEDCGKDDDRQLLQLSSGRVFSGFSARGYHESDEP 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + ++ G+S + E++ + + V+LR W++S +NFL ++ A + E+ + Sbjct: 123 DAVSEVGQSFIRLEQQTMARCPDAVLLRVDWLFSESRNNFLNRLVDAAIHKEELCISTSM 182 Query: 179 FGTPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 G PT A +AR ++ ++ + S L G++H AD S FA+ + Sbjct: 183 RGCPTDAHTVARVLVAMSEQIDCGVSKPDLSGVYHY-ADSDACSLYTFAKTVITVVKSMS 241 Query: 238 G-PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + T+ + L+C K+ +T I+ W+ ++ +L Sbjct: 242 EVRVETIGEVDTRPLVDGERQSENHELNCRKILSTFGIKQRPWRRSLQEVL 292 >gi|110736655|dbj|BAF00291.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis thaliana] Length = 327 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 23/249 (9%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA--- 166 + E T +N+YGKSK+A E + ++ IL ++ ++ + L L + Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILGSSIIFGPQTVSPLPKTLPIQWID 198 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTADGGP- 219 K+ + D+F P + ++ I LI+ + D +R + + GGP Sbjct: 199 SSLKKGDTVDFFHDEFRCPI----YVKDLVNITFKLIDRWVSDDKQMRLVLNA---GGPE 251 Query: 220 -VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 +S A+ + + RG S + + PA +D +KL +T + ++ Sbjct: 252 RLSRVQMAQMV---AEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLIHTLELSPTS 308 Query: 279 WKEGVRNIL 287 +KEGVR L Sbjct: 309 FKEGVRLTL 317 >gi|46124817|ref|XP_386962.1| hypothetical protein FG06786.1 [Gibberella zeae PH-1] Length = 348 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 26/239 (10%) Query: 4 LVIGNNGQIAQSLSS-MCVQDVEIIRVG--RPD------IDLLKPKDFASFFLSFSPDVI 54 LV G G + + +S+ +++ E+ G R D +DL + ++F P VI Sbjct: 7 LVTGATGLLGREVSAAFGLKNWEVKGTGFSRADGISTFKVDLGNENEVSTFLDETKPQVI 66 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPID 113 ++ AA DK + +PE A ++N + A+AK A IYISTDYVF G+ P + Sbjct: 67 VHCAAQRFPDKVDKDPEGARALNVAASKALAKLAAERDTFVIYISTDYVFPGVPGDAPYE 126 Query: 114 EFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILRTAWVY------SIFGSNFLLS 161 + P N+YG++KL GE V A V+LR +Y S N L+ Sbjct: 127 ADAEPRPTNLYGQTKLDGERAVLETFKEAGKEGLGVVLRVPVLYGNAETPSESAVNVLMD 186 Query: 162 MLRLAKER-REISVVCDQFGTPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTAD 216 L A+ + +IS+ PT+ I R I+ ++ N+ SL I +++ Sbjct: 187 ALWKAQTQGAQISMDHWAIRYPTNTEDIGRVCHDISVKYLDTPSNNRASLPNILQFSSE 245 >gi|41033609|emb|CAF18471.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus tenax] Length = 277 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 22/222 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AAYT VD E + A+ N A +YISTDYVFDG R Sbjct: 60 DVVVHAAAYTDVDGCEVDRARAYRANF----LATLAVARAARRVVYISTDYVFDG-ERGM 114 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKE 168 E NP+N YG SKL GE V + V++R + ++ + NF + L + Sbjct: 115 YREEDVPNPVNYYGLSKLLGEGPVLA--RGGVVVRVSGLFGVSPHGKRNFGVEALLRLRW 172 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E+ DQ +PT + +A L + + + GI H+ G P + +FA Sbjct: 173 GEEVRAFVDQRLSPTY-------VPFLAERLADLLERDVEGIVHIA--GEPATRFEFAVA 223 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + + G S V + A RP S LD S+ A+ Sbjct: 224 L---AEALGVDKSLVKPARLSEARLAARRPRDSSLDTSRAAS 262 >gi|302348460|ref|YP_003816098.1| DTDP-glucose 4,6-dehydratase [Acidilobus saccharovorans 345-15] gi|302328872|gb|ADL19067.1| DTDP-glucose 4,6-dehydratase [Acidilobus saccharovorans 345-15] Length = 325 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGL 107 F P+VIIN AA T VD++ P+ + N GA + +AA +G+ +++STD VF D Sbjct: 70 FRPEVIINLAAETHVDRSIYSPQDFVTTNVIGAVNVLEAARRLGVRLLHVSTDEVFGDAS 129 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP P + Y SK + E V +Y Y Sbjct: 130 VYGCADESSPLRPSSPYSASKASAEHFVLAYVRTY 164 >gi|303288449|ref|XP_003063513.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455345|gb|EEH52649.1| predicted protein [Micromonas pusilla CCMP1545] Length = 549 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 26/243 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P+V+ A + VD E+E E ++NA G +A AA +G +Y STD VF G Sbjct: 274 PEVVFICAGFNWVDGCENEAEGLRPRNMNAVGPRNLAVAAKKVGAKVVYFSTDAVFIGNE 333 Query: 109 RTPI----DEFSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYS--IFGSNFLLS 161 + DEF P N +G++KL GE+ V + +++RTA V+ G NF+ Sbjct: 334 TGKVYAEADEFLPQNK---FGETKLLGEQLVTAVCPERTLVIRTAGVFGPERVGKNFVYR 390 Query: 162 MLRLAKERREISVVCDQFGTPT-----SALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 M + +++V D+F + A +A ++ ++ D+ G FH+ + Sbjct: 391 MCEAINDADDMAVPTDRFCSHVYNRDLGASHLAPVPVRPPASVKGLVDSDAAGTFHVVGE 450 Query: 217 GGPVSWADFAEYI-----FWESAERGGPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKL 268 S +FA+ + F ++A R + + + + + + A RP L KL Sbjct: 451 ES-FSRFNFAQRVAVTLGFKDTATRVIKRTDLKTMHDQTFEARGFAAERPKNLALAADKL 509 Query: 269 ANT 271 T Sbjct: 510 KET 512 >gi|312877745|ref|ZP_07737697.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] gi|311795464|gb|EFR11841.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] Length = 145 Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 15/153 (9%) Query: 139 TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 T Y ++R +WV+ I +NF+ +L +KER + + D+ PT + A + Sbjct: 4 TEYYYLIRVSWVFGIGNANFIRKVLDWSKERDILKIADDEISAPTYTDDLVYATYLL--- 60 Query: 199 LIENSDTSLRGIFHMT-ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR 257 L E + G++H+T WA+F + G K+ R + A R Sbjct: 61 LKERA----FGLYHITNTTASRFEWAEFV-------LRKIGWKGKLERAKKDDFKLPAKR 109 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P YS LD L T N + TW++ L I Sbjct: 110 PGYSVLDNFGLKETVNFEMPTWQDATERYLKQI 142 >gi|328476917|gb|EGF47246.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus MTCC 5462] Length = 84 Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/79 (46%), Positives = 51/79 (64%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ P+ A+ +PD+IIN AAYTAVD AE+ E A+ +N +GA +AK A G Sbjct: 6 ELDVSCPRSVANAVQLANPDLIINAAAYTAVDAAEEHVEAAYRVNRDGAHQLAKEAQRHG 65 Query: 93 IPCIYISTDYVFDGLSRTP 111 IP ++STDYVFDG P Sbjct: 66 IPLFHLSTDYVFDGALARP 84 >gi|20094161|ref|NP_614008.1| nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] gi|19887177|gb|AAM01938.1| Nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] Length = 309 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 11/136 (8%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA- 81 D+EI+R D+ P+ F + P+ +I+ AA V + + P + INA G Sbjct: 46 DIEIVRA-----DVTDPRAVERTFREYRPEAVIHLAAQVNVRYSMESPFVDARINALGTL 100 Query: 82 GAIAKAADSIGIPCIYISTD-YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 ++ AA+ +Y S+ V+ P+DE PT P++ YG SKLAGE V Y Sbjct: 101 NLVSLAAEHDVERFVYASSGGAVYGEPEYLPVDEEHPTRPISNYGVSKLAGEYYVRVYAE 160 Query: 141 ----NYVILRTAWVYS 152 YVILR A VY Sbjct: 161 RDGFEYVILRYANVYG 176 >gi|164507700|emb|CAL64846.1| putative 2-epi-5-epi-valiolone dehydratase/epimerase GacO [Streptomyces glaucescens] Length = 307 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 24/200 (12%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 + +STD VFDG SR E +P P N YG++KLA E V + V+LR + VY Sbjct: 111 LLVSTDNVFDG-SRPDNSEDTPVCPANAYGRAKLAAERTVLDAAADAVVLRVSLVYGHEP 169 Query: 156 S------NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + NF + +++V DQ+ TP +AR + + ++ Sbjct: 170 ADAGKWLNFFAACAHRLLRGEQVTVPEDQWTTPVLVDDVARVTAAVLF-----AGGAVPP 224 Query: 210 IFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS- 266 + H+ GGP VS A +A + AE G + + A RP +CL S Sbjct: 225 VLHL---GGPDRVSRAAWASVV----AEALGAPPHLVVPVPRADTRYASRPENACLTGSL 277 Query: 267 --KLANTHNIRISTWKEGVR 284 +L T I + +EG R Sbjct: 278 LGRLPATGEIAVRGVREGAR 297 >gi|325525852|gb|EGD03576.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. TJI49] Length = 99 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D E +P A +IN + I A G + ISTDYVFDG S P E + NPLNI Sbjct: 6 DVCERDPSAARAINVDAPARIGALAARHGAWTLGISTDYVFDG-SAAPYREDAVPNPLNI 64 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVY 151 YG++KL GE + + + +LR +Y Sbjct: 65 YGRTKLEGEAALLAASPLSCVLRLPLLY 92 >gi|254292575|ref|YP_003058598.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] gi|254041106|gb|ACT57901.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] Length = 280 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 16/205 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-----EIIRVGRPD----IDLLKPKDFASFFLSFSP 51 M+ LV+G G + V D+ E I R + DL + P Sbjct: 1 MRWLVLGATGLLGPCF----VNDIQNRGHEAISAARSNADENFDLSDIDALTTVLEEIKP 56 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +IN AA VDK E P A+ IN A+A + P + +STD+ F RTP Sbjct: 57 DGVINCAANIYVDKCEANPADAYLINTRPLSALANWSRETNQPLLQVSTDHYFIEGGRTP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P + +N Y ++K E +A ++LRT V + G + L ++ Sbjct: 117 QPETAPVSLVNEYARTKYLAEH-LALTAPKALVLRTNIVGAQKGHGRWVKESLL--DKGA 173 Query: 172 ISVVCDQFGTPTSALQIARAIIQIA 196 +++ D + +P +AR + +A Sbjct: 174 MTLFMDFYSSPLHVKDMARISLDLA 198 >gi|325967604|ref|YP_004243796.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323706807|gb|ADY00294.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 326 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 +DVE+I+ D D LK P++I+N AA T VD++ PE N G Sbjct: 47 RDVEVIKGDITDYDRLK-----DVVQRIHPEIIVNFAAETHVDRSIVNPEPFIRTNVYGV 101 Query: 82 GAIAKAADSIGIPCIYISTDYVF-DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 I K G I+ISTD V+ D + P DE + P N Y +K AG+ + ++ Sbjct: 102 YTILKIVKEFGTRLIHISTDEVYGDMEGKEPADENTVLRPSNPYAATKAAGDALIMAFHR 161 Query: 141 NY 142 Y Sbjct: 162 TY 163 >gi|253581525|ref|ZP_04858750.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium varium ATCC 27725] gi|251836595|gb|EES65130.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium varium ATCC 27725] Length = 293 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 2/114 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DLLK + F PDVIIN AA +D E E+A ++ + + I+ Sbjct: 49 LDLLKFEQLEKIFQIERPDVIINVAAIVNLDICERNFELAKKLHWDLSRFISDYCQKTEC 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 IYISTD +FDG + SP NP+N Y K+K GE++ A T +I+RT Sbjct: 109 KYIYISTDSIFDGKIGNYRECDSP-NPINNYAKTKYLGEQE-ALKTPESIIIRT 160 >gi|42744598|gb|AAH66615.1| Tgds protein [Danio rerio] Length = 347 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F + DV+ + AA T V+ + P +N +G + +A+ + Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 IYISTD V+ P DE SP P N Y +SK A E V SY + VI R++ Sbjct: 125 RFIYISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSN 184 Query: 150 VY 151 VY Sbjct: 185 VY 186 >gi|332795820|ref|YP_004457320.1| dTDP-4-dehydrorhamnose reductase [Acidianus hospitalis W1] gi|332693555|gb|AEE93022.1| dTDP-4-dehydrorhamnose reductase [Acidianus hospitalis W1] Length = 232 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 21/187 (11%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I + G++A++L++ D E I + P K + + P+++I+ ++ Sbjct: 4 ITDEGELARALTNAI--DDEFIFIDSP------KKVYET-----KPEIVIH-----TLED 45 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 + P + +++N A IAKAA+ IG +Y ST ++DG + E S +PLN YG Sbjct: 46 NSNNPSM-WNLNTWFAINIAKAANKIGSLNVYFSTFMIYDG-KKGYYSETSTPSPLNYYG 103 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 +KL GE +AS NY+ILR VYS L +++ ++ + + +P S Sbjct: 104 MTKLVGETAIAS-LGNYLILRLGAVYSPSYRGILFHIIKALIKKGIAKCNTNLYLSPISV 162 Query: 186 LQIARAI 192 +A A+ Sbjct: 163 KDVAYAV 169 >gi|294463471|gb|ADE77265.1| unknown [Picea sitchensis] Length = 317 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 24/250 (9%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPCIYISTDYVFDGLS 108 P V++N AA + E P A +IN ++ +D I++STD V++G+ Sbjct: 76 PHVVVNCAAISVPRACELNPSAATAINVPRPLIKWMSTFSDRGAPLLIHLSTDQVYEGV- 134 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR---- 164 ++ E TN +N+YGKSK+ E + S ++Y ILR++ +Y G + ++ + + Sbjct: 135 KSFYKEDDETNAVNMYGKSKVMAENYICSNFSSYAILRSSIIY---GPHPVIPVEKTLPI 191 Query: 165 -----LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 + +EI D+F P + I+ +LI ++ + I + GGP Sbjct: 192 QWIDGVLSSGKEIEFFHDEFRCPIYVKDVVNVIL----SLIRKWNSGDKCIQVVLNVGGP 247 Query: 220 --VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 VS AE + S +G S + + PA +D SK+ I + Sbjct: 248 DRVSRVQMAEVV---SELKGYDSSSIKSVSAASVNRGVASPADISMDVSKVVKLLGINPT 304 Query: 278 TWKEGVRNIL 287 +K+GV+ L Sbjct: 305 PFKDGVQLTL 314 >gi|288920546|ref|ZP_06414852.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] gi|288348039|gb|EFC82310.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] Length = 361 Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 18/189 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGRPD-----------IDLLKPKDFASFF 46 M+ LV+G +G + L V+D ++ +R P +D+ P+ F Sbjct: 1 MRVLVLGGDGMLGGELVRRLVRDHDVTATVRAHAPSSPSPADRVLCGVDVRHPESLVDVF 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + PD ++N TA E + A +NA +A+ + G +++STD VF G Sbjct: 61 AATRPDAVVNAVGLTARRVGEQGVQPAIEVNALFPHRLARLCGAAGARLVHVSTDCVFSG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAG---EEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 ++ P +P++ +G +KL G E + + + L TA V + FL + Sbjct: 121 RLGEYHEDDVP-DPVDAHGTTKLLGELTEPGTLTLRTSVLGLETAAVPAGLVEWFLSATG 179 Query: 164 RLAKERREI 172 R+ RR + Sbjct: 180 RIPGYRRVV 188 >gi|120925|sp|P21977|GALE_STRTR RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|153749|gb|AAA26944.1| UDPglucose 4-epimerase [Streptococcus thermophilus] Length = 332 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 40/219 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSN 157 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G+N Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAN 177 Query: 158 FLLSMLRLAKE--------------RREISVVCDQFGTP 182 ++ ++R E R +I + D + TP Sbjct: 178 LMVRLVRTRSETHLLPIILQVAQGVREKIMIFGDDYNTP 216 >gi|126696753|ref|YP_001091639.1| UDP-glucose 4-epimerase [Prochlorococcus marinus str. MIT 9301] gi|126543796|gb|ABO18038.1| UDP-glucose 4-epimerase [Prochlorococcus marinus str. MIT 9301] Length = 330 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 3/117 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F L PD +++ AA V ++ +P S N +G ++ K I I Sbjct: 52 LDIREESSFKELLLKIKPDYLVHFAASAYVSESIFKPLDYISNNIDGMRSVCKICSEIKI 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 P ++ S+ V+ PI+E P NPL+ YG++KL EK+ + +N LR WV Sbjct: 112 PIVFSSSCSVYGEAKNVPINESEPLNPLSPYGETKLFC-EKILKWCSNAYGLR--WV 165 >gi|330882226|gb|EGH16375.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 114 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 8/109 (7%) Query: 188 IARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESAERGG-----PYS 241 IA I H + + D+ +L G++H+ A G SW FA ++ E AER G Sbjct: 6 IADVTAHILHRVSGDQDSATLAGVYHLAA-AGETSWHGFARFVL-EHAERNGVQLKVSSD 63 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I T+ YP A RP S L KL T +++ W++G + +L I Sbjct: 64 KIGAIPTEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDEI 112 >gi|152980065|ref|YP_001353949.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] gi|151280142|gb|ABR88552.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] Length = 284 Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 44/241 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMC-----------VQDVEIIRVGRPDI--------DLLKPKD 41 M+ LV+G +G + ++ + V+ + R P I D+ Sbjct: 1 MRILVLGASGMLGSAMMRVLNEKDVGEVFGTVRSANVARFFTPQIAQRLVPGCDVENQDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PDV+IN D+P +A IN+ +A G I+ISTD Sbjct: 61 LNKVFAEIKPDVVINCIGLIKQLAEADDPLVALPINSLLPHRLAALCKLGGARLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VFDG +R E +N ++YGKSK GE Y + + LRT+ + + S L Sbjct: 121 CVFDG-ARGGYLESDVSNATDLYGKSKYLGE----VYFPHTITLRTSIIGAELQSAHGLI 175 Query: 162 MLRLAKERREISVVCDQF------GTPTSAL-QIARAIIQIAHNLIENSDTSLRGIFHMT 214 LA++ R C+ + G PT L QI R II L G++H+ Sbjct: 176 EWFLAQKER-----CNGYSKAFFSGLPTVVLAQIVRDIII--------PRPELSGLYHVA 222 Query: 215 A 215 A Sbjct: 223 A 223 >gi|152997505|ref|YP_001342340.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] gi|150838429|gb|ABR72405.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] Length = 292 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 6/194 (3%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I IS+ VF G P E + Y K+ + E V S N ++LRT W++S G Sbjct: 96 IMISSARVFSGNKDVPYAETDVPDSSEPYAKALIEAESIVLSNPEN-IVLRTGWLFSGKG 154 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 +F+ L L ++ ++ D G+PT + R ++ I + +GI+H Sbjct: 155 DDFVCRTLGLIQDGVNLAYKDDLIGSPTPVSDLVRVVLSIVSQGYYGAQN--KGIYHYCC 212 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY--SCLDCSKLANTHN 273 +SW E I S++ +P A L C K+ N Sbjct: 213 -AEEISWIRLVEAILATSSQFDPKAQVEVEAIGDSFPEVQETSAMQRQSLSCRKIFNHFG 271 Query: 274 IRISTWKEGVRNIL 287 I+ W+ +R+++ Sbjct: 272 IKQRPWRSKLRSLV 285 >gi|167461788|ref|ZP_02326877.1| putative reductase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 276 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 12/168 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+++N D AE +P A+ +N + + + +G + ISTD VF G Sbjct: 57 AVHPDILVNCIGILN-DSAERDPAQAYHVNGRLPHLLKQVVNQVGGKLVQISTDCVFSG- 114 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + +E+ + +Y +SK GE K A ++ +RT+ V N + + Sbjct: 115 KQGGHEEWERPDGFTVYSRSKAMGEVKDAP----HLTIRTSIVGPEIRQNGIGLLNWFLN 170 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + E+ + + + L++A+ + H+++E DTSL GI H+TA Sbjct: 171 QSGEVKGYTEAYWNGVTTLELAKFV----HHVME--DTSLNGIVHLTA 212 >gi|330819507|ref|YP_004348369.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] gi|327371502|gb|AEA62857.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] Length = 314 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 20/263 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L FF + PD +I AA D E +P A ++N + AIA A++IG Sbjct: 57 LDVLDAGALDRFFATQRPDAVIVCAAERRPDVCERDPAAARALNVDAPAAIAARAEAIGA 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + +STDYVFDG S P E +PLN YG+ K GE + + ++ LR +Y Sbjct: 117 WTLAMSTDYVFDG-SAPPYRETDLPSPLNAYGRGKADGEAALLAASSRACALRLPLLYGP 175 Query: 154 ---FGSNFLLSMLR--LAKERREISVV-CDQFGT--PTSALQIARAIIQIAHNLIENSDT 205 + + + S++ +A R + V D + T PT +A I+Q+A + Sbjct: 176 AIDWADSAVTSLVPAIVASSRDGAAPVEMDAWATRYPTWTPDVAEVIVQLAER--HAAGA 233 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLD 264 ++ G+ + D P++ + A I V R+ P A RP LD Sbjct: 234 AVTGLCQWSGD-EPMNKHEIATRI-------AAALGIVPRLIAVAEPKDATPRPRDCHLD 285 Query: 265 CSKLANTHNIRISTWKEGVRNIL 287 S+L R + + E +R +L Sbjct: 286 SSRLEALGIGRRTRFDEAIRAVL 308 >gi|322382712|ref|ZP_08056564.1| dTDP-4-keto-L-rhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153321|gb|EFX45757.1| dTDP-4-keto-L-rhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 249 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 12/168 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+++N D AE +P A+ +N + + + +G + ISTD VF G Sbjct: 30 AVHPDILVNCIGILN-DSAERDPAQAYHVNGRLPHLLKQVVNQVGGKLVQISTDCVFSG- 87 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + +E+ + +Y +SK GE K A ++ +RT+ V N + + Sbjct: 88 KQGGHEEWERPDGFTVYSRSKAMGEVKDAP----HLTIRTSIVGPEIRQNGIGLLNWFLN 143 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + E+ + + + L++A+ + H+++E DTSL GI H+TA Sbjct: 144 QSGEVKGYTEAYWNGVTTLELAKFV----HHVME--DTSLNGIVHLTA 185 >gi|88704346|ref|ZP_01102060.1| dTDP-4-keto-L-rhamnose reductase family protein [Congregibacter litoralis KT71] gi|88701397|gb|EAQ98502.1| dTDP-4-keto-L-rhamnose reductase family protein [Congregibacter litoralis KT71] Length = 292 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 9/220 (4%) Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 E+ S + E A ++KA + IP + +S+D VF G + EF + + G + Sbjct: 69 EVPQSTDIERAHWLSKACEHSAIPYLLLSSDLVFSGQGTRSLREFDAPDAFDEPGFQIIE 128 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 E +V + ++LRT +++ +NFL ML R+ S TP + +AR Sbjct: 129 TETRVTQAAPSAIVLRTGPLFASADNNFLTRMLSHMTSERQASFDDQNVFTPVACADVAR 188 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 + + L ++ RG++H ++ +A + S Y I Sbjct: 189 VLAAMLDQLSVGAEA--RGVYHYSSGDRTTEYAFAEAALAAMS-----QYRDCGDIVISA 241 Query: 251 YPTKAHRPAYS-CLDCSKLANTHNIRISTWKEGVRNILVN 289 +A A + DCS+L +T I+ W+ G N V Sbjct: 242 KDKRADENAETRFFDCSRLRDTFAIKQVPWR-GFMNATVK 280 >gi|261406329|ref|YP_003242570.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] gi|261282792|gb|ACX64763.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] Length = 305 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 20/172 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEI-----IRVGRP---------DIDLLKPKDFASF 45 MK +V G G I L + V Q E+ + G P + + + ++ Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQGYEVHVIDNLTTGEPGRLHSEAILHVADVNSQQTTAY 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PDV+ + AA V ++ EP + N G I A G+ ++ ST V+ Sbjct: 61 ISVLKPDVVFHLAAQADVQRSIQEPRLDADANVMGTLNILDACRKAGVRKIVFASTAGVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 L R+ + E P NP++ Y SK+AGE+ + Y Y ILR VY Sbjct: 121 GDLERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQYTILRYGNVYG 172 >gi|323476109|gb|ADX86715.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A] gi|323478833|gb|ADX84071.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus HVE10/4] Length = 255 Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ + ++ P +A+S N A IA+A +G +++S+ ++DG R Sbjct: 40 PDVILHTFE-IPIFESNMNPPLAWSFNTWYAINIARAGSKVGSVNVFLSSFLIYDG-KRG 97 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 E + NPLN YG +KL GE + + NY++LR ++S+ FL ++ Sbjct: 98 FYKEHNTPNPLNYYGLTKLVGESSIIT-LGNYLVLRVGALFSLSYRGFLFPFIK 150 >gi|329922326|ref|ZP_08278003.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] gi|328942189|gb|EGG38460.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] Length = 392 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 PDV+ + AA V ++ EP + N G I A G+ ++ ST V+ L Sbjct: 143 LKPDVVFHLAAQADVQRSIQEPRLDADANVMGTINILDACRKAGVRKIVFASTSGVYGDL 202 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 R+ + E P NP++ Y SK+AGE+ + Y Y ILR VY Sbjct: 203 ERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQYTILRYGNVY 250 >gi|189218515|ref|YP_001939156.1| nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] gi|189185373|gb|ACD82558.1| Nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] Length = 331 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 37/240 (15%) Query: 2 KCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPDIDLLKPKD--FASFFLSFSP-- 51 K LV G+ G I L ++C V +I + D P D + FLS Sbjct: 3 KILVTGSQGYIGVHLVALCKAYGMHVTGCDIGYFEGCEWDSFPPSDVEWKKDFLSIKENE 62 Query: 52 ----DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDG 106 D I + AA + E + + + +N +GA ++A+ A G+P ++ + V+ Sbjct: 63 LEGFDAICHLAAISNDPMGELDENLTYRVNRDGAISLAQKAKKAGVPLFLFAGSCSVYGK 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNFLL--- 160 +DE +P NP++ Y +SK+ E +++ +++ V LR A + FG + +L Sbjct: 123 AGSLDLDENAPFNPVSAYARSKVEAEREISKLSSSSFSPVFLRNA---TAFGYSPMLRID 179 Query: 161 ----SMLRLAKERREISVVCDQFGTPTSAL----QIAR---AIIQIAHNLIENSDTSLRG 209 ++L A REI V+ D GTP L IAR A+IQ L+ N ++ G Sbjct: 180 LVANNLLSCALATREIRVMSD--GTPWRPLVHCKDIARAFIALIQAPRQLVHNQSINIGG 237 >gi|227831734|ref|YP_002833514.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|229580698|ref|YP_002839098.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|229583548|ref|YP_002841947.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] gi|284999297|ref|YP_003421065.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] gi|227458182|gb|ACP36869.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|228011414|gb|ACP47176.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|228014264|gb|ACP50025.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] gi|284447193|gb|ADB88695.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] Length = 255 Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ + ++ P +A+S N A IA+A +G +++S+ ++DG R Sbjct: 40 PDVILHTFE-IPIFESNMNPPLAWSFNTWYAINIARAGSKVGSVNVFLSSFLIYDG-KRG 97 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 E + NPLN YG +KL GE + + NY++LR ++S+ FL ++ Sbjct: 98 FYKEHNTPNPLNYYGLTKLVGESSIIT-LGNYLVLRVGALFSLSYRGFLFPFIK 150 >gi|149052292|gb|EDM04109.1| rCG33311, isoform CRA_a [Rattus norvegicus] Length = 144 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 28 RVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 R RP ++LL + F P VI++ AA D E +P+ A +N +G + Sbjct: 50 RRARPKFEQVNLLDSEAVHHLIHDFQPHVIVHCAAERRPDVVESQPDAASQLNVGASGNL 109 Query: 85 AKAADSIGIPCIYISTDYVFDG 106 AK A +IG IYIS+DYVFDG Sbjct: 110 AKEAAAIGAFLIYISSDYVFDG 131 >gi|227828996|ref|YP_002830776.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|229586206|ref|YP_002844708.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238621191|ref|YP_002916017.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] gi|227460792|gb|ACP39478.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|228021256|gb|ACP56663.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238382261|gb|ACR43349.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] Length = 255 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ + ++ P +A+S N A IA+A +G +++S+ ++DG R Sbjct: 40 PDVILHTFE-IPIFESNINPPLAWSFNTWYAINIARAGSKVGSVNVFLSSFLIYDG-KRG 97 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 E + NPLN YG +KL GE + + NY++LR ++S+ FL ++ Sbjct: 98 FYKEHNTPNPLNYYGLTKLVGESSIIT-LGNYLVLRVGALFSLSYRGFLFPFIK 150 >gi|255541506|ref|XP_002511817.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis] gi|223548997|gb|EEF50486.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis] Length = 318 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 9/123 (7%) Query: 34 IDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG----AIAKAA 88 +DL F + F PDV++N AA + E +P A SIN + + + Sbjct: 60 VDLQTGDGFQAITHEFGQPDVVVNCAAISLPRACEKDPATAMSINIPSSLVNWLSTFEGR 119 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 D++ I++STD V++G+ ++ E P+N+YGKSKL E+ ++ N+VILR++ Sbjct: 120 DTL---LIHLSTDQVYEGV-KSFYKEEDEAVPVNVYGKSKLEAEKFISERCLNFVILRSS 175 Query: 149 WVY 151 ++ Sbjct: 176 IIF 178 >gi|218191852|gb|EEC74279.1| hypothetical protein OsI_09525 [Oryza sativa Indica Group] Length = 290 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 16/200 (8%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--- 152 I++STD V++G+ ++ E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 24 IHLSTDQVYEGV-KSFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQT 82 Query: 153 ---IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + S + M + + +++ D+F P + ++ + + + + + Sbjct: 83 ISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADG----KA 138 Query: 210 IFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 + + GGP VS AE + + RG +S + + P +D +K Sbjct: 139 VQVLLNVGGPDRVSRLQMAESV---ADVRGYSHSIIKSVSASSVDRGVASPPDISMDITK 195 Query: 268 LANTHNIRISTWKEGVRNIL 287 L I+ ++++GVR L Sbjct: 196 LTQMLGIKPISFQDGVRATL 215 >gi|119502956|ref|ZP_01625041.1| putative dTDP-L-rhamnose synthase [marine gamma proteobacterium HTCC2080] gi|119461302|gb|EAW42392.1| putative dTDP-L-rhamnose synthase [marine gamma proteobacterium HTCC2080] Length = 291 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 59/290 (20%), Positives = 127/290 (43%), Gaps = 23/290 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L++G++ I SL + +Q E+I+V + + + PD+I++ Sbjct: 1 MRILLLGSDTAIGHSLRAFIPPLQRHELIQVPLEATRWTRQRPAKKLLKTSEPDLILDAR 60 Query: 59 AYTAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 + +D+ + EP + E + + AA +G + +S+ VF G + P E Sbjct: 61 LVSLIDRVDALEP-----ADIERSQWLGSAAAKLGCHYLLLSSSRVFSGELKRPYRESDK 115 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + + G + E ++ ++ +LR WV+S G + + +L ++ + ++ + Sbjct: 116 ADAQDELGAILVEAETQLRELVDSIFVLRLGWVFSGRGPSAMNRILDSLRDGKILTASDN 175 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADG--GPVSWADFAEYIFWES 233 + P + ++AR +A +I+ RG+FH ++G G S+A+ A + Sbjct: 176 RRDCPVHSAEVAR----VAAGVIDQIGVGAPGRGLFHYGSEGDTGYFSFAEAAVACASQF 231 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A +++ T PT A L+C+ + + I+ W++ V Sbjct: 232 ARFADAREQLHEDTT--LPT-----ANRSLECTAIRHQFGIQQRPWRDFV 274 >gi|186894379|ref|YP_001871491.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis PB1/+] gi|23321102|gb|AAN23043.1|AF461768_12 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] gi|23321119|gb|AAN23059.1|AF461769_12 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] gi|186697405|gb|ACC88034.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis PB1/+] Length = 277 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 11/182 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL---LKPKDFASFFLSFS-PDVIINP 57 K ++G+NG I +L ++E+I VGR + D+ L+ DF S D +I Sbjct: 3 KVFILGSNGYIGNNLMESLCDNIEVITVGRSNADIYINLESDDFQSLLNKVEFKDTVIFL 62 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 +A ++ D+ + + ++ IN + ++ + + ++ S+D VF G ++ DE S Sbjct: 63 SAISSPDECNNNYDYSYKINVKNTISLISLLLAKNVRVMFSSSDAVF-GATQNLCDENSE 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG+ K + E + +++ ++R ++V G N SM + KE E + D Sbjct: 122 KKPFGKYGEMK-SEVEDYFTLEDDFFVVRFSYV---LGRNDKFSM--MIKEFYEQGKILD 175 Query: 178 QF 179 F Sbjct: 176 VF 177 >gi|94500438|ref|ZP_01306970.1| dTDP-4-dehydrorhamnose reductase [Oceanobacter sp. RED65] gi|94427473|gb|EAT12451.1| dTDP-4-dehydrorhamnose reductase [Oceanobacter sp. RED65] Length = 283 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/290 (20%), Positives = 117/290 (40%), Gaps = 26/290 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +++G + + ++L+ + + V + + D DL S SP +IN Sbjct: 8 VILGADNPVGRALTELAQEKKVSLHAIYSTDWDLSDIDTVQSRLKELSPQFLINCIR--- 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + A A +A+ ++ IP + +S++ VF G E P Sbjct: 65 --------PLGSGTTAHIASVLAQVCCTLNIPLLQLSSNAVFAGQESHVFKEDDEPYPGT 116 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 G+ LA E + S ++ILR W++S G + + +L LA+ + + + P Sbjct: 117 AIGQQVLAVENAIQSSCPRHMILRVGWLFSSQGHDDVSRLLELAQTESVLHLSDSKVLCP 176 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPYS 241 TSA IA ++ + + + L GI+H + + FAE + E+ + P Sbjct: 177 TSACDIAAVLMAMVY---QARYAELWGIYHYCS-AEKTNLYKFAEVVVAEARQYEDLPLQ 232 Query: 242 KVY----RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ Q+ + R L+ K+ +T I+ W++ + IL Sbjct: 233 EIQVDASHEMNAQFSESSPR-----LNTKKILHTFGIKPKPWRQALSRIL 277 >gi|224127570|ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|222860880|gb|EEE98422.1| predicted protein [Populus trichocarpa] Length = 196 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 9/123 (7%) Query: 34 IDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG----AIAKAA 88 +DL F S F P V++N AA + E +P+ A SIN + + + Sbjct: 60 VDLTTGDGFQSIASKFGQPHVVVNCAALSVPRVCEKDPDAAMSINVPCSLVNWLSSFEER 119 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 D++ I++STD V++G+ ++ E T P+N+YGKSK+A E+ ++ NY ILR++ Sbjct: 120 DTL---LIHLSTDQVYEGV-KSFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSS 175 Query: 149 WVY 151 ++ Sbjct: 176 IIF 178 >gi|220925443|ref|YP_002500745.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219950050|gb|ACL60442.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 340 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 19/153 (12%) Query: 1 MKCLVIGNNGQIAQSLSSM-------CVQDV-----------EIIRVGRPDIDLLKPKDF 42 M+ +VIG NG + + LS + CV D E+ R+ D+ P + Sbjct: 1 MRIMVIGGNGFVGRPLSRLLSAEHEVCVLDTLRYGGLRFTGEELSRLKVVLGDITDPDEV 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A+ +F P+ II+ AA + + E +P +A +N G + A G ++ S+ Sbjct: 61 AAAVAAFRPEAIIHLAAIHYIPECEQDPGLAVRVNVAGTVNLLSACPP-GCRFVFASSGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 V+ +R ++ S P +IYG +KL GE V Sbjct: 120 VYKADTRPHTEDGSAVEPSDIYGFTKLHGEHYV 152 >gi|294781731|ref|ZP_06747064.1| dTDP-4-dehydrorhamnose reductase (RfbD-2) [Fusobacterium sp. 1_1_41FAA] gi|294481841|gb|EFG29609.1| dTDP-4-dehydrorhamnose reductase (RfbD-2) [Fusobacterium sp. 1_1_41FAA] Length = 441 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 46/259 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF--------------FL 47 + L+ G NG I Q + V+D +II + D+ + K K + F FL Sbjct: 142 RILITGINGFIGQYIGKELVKDFQIIGL---DVVINKEKIWDKFYLGDIRDRNLLEEIFL 198 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D++I+ A A+ K E+ + + IN + + + + ++IS+D VFDG Sbjct: 199 QNKIDIVIHLGAEKALIKCENNKKECYEINYQATMDLYRLSKKHQAKFLFISSDQVFDG- 257 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVY--------SIFGS-- 156 E S +P+N YG+ KL E + + N I RTA + IF S Sbjct: 258 KLGNYKEDSLCSPINYYGELKLKVENDLLKEKDKNITICRTALDFGKIPENQREIFDSVK 317 Query: 157 --------NFLLS-MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 F++ ++ K R +I + +++ +PTS I R I ++ + ++ Sbjct: 318 KNDKLLVQGFIIDHIIYKLKSREKIILPQNEYMSPTSVELIYRQIKEVI-------NKNI 370 Query: 208 RGIFHMTADGGPVSWADFA 226 GI H G +S +F Sbjct: 371 NGILHCCG-GERISRYEFG 388 >gi|302342459|ref|YP_003806988.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301639072|gb|ADK84394.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 282 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 32/236 (13%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK-AADSIGIPCIYISTDYVFDGLSR 109 P+V++N A + VD E +P+ A+ +N A +A A G ++ISTD+V+DG Sbjct: 57 PEVVVNLVALSNVDACEQDPQRAYLLNVRTAQNLAGWLAKRPGAALVHISTDHVYDG--- 113 Query: 110 TPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-------NFLLS 161 P P LNIY SK A E V + TA + FG +F + Sbjct: 114 -PGAHAEPDVTLLNIYAYSKFAAELAVLAVGG------TALRVNFFGRSLTAGRMSFSDA 166 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 +++ + + D F +P S +A I ++ + G+F++ A G +S Sbjct: 167 IIQGLSAGQPMGFFTDVFFSPLSLDTLAAMIARVVAD-------PAPGVFNLGAASG-LS 218 Query: 222 WADFAEYIFWESAERGG-PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 DFA W A+R G + I Q +A RP + K + + + Sbjct: 219 KRDFA----WRVAQRMGLTLAGAREITLAQAGLRARRPTGMVMAVGKFEKRYGVTL 270 >gi|225454083|ref|XP_002266457.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera] Length = 318 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 7/121 (5%) Query: 34 IDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK---AAD 89 ++L + F + SF P V++N AA + E +P A SIN ++ K + + Sbjct: 57 VNLQSGEGFEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINV--PSSLVKWLLSFE 114 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 I++STD V++G+ ++ E T P+N+YGKSK+A E+ +++ +NY ILR++ Sbjct: 115 ESNTLLIHLSTDQVYEGV-KSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSI 173 Query: 150 V 150 + Sbjct: 174 I 174 >gi|146303517|ref|YP_001190833.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] gi|145701767|gb|ABP94909.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] Length = 259 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 11/122 (9%) Query: 47 LSFSPDVIIN----PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 L PD++I+ P D+A A+++N A + KA IG +Y+S+ Sbjct: 33 LQERPDIVIHTYEVPYQEANWDRAR-----AWNVNTWLAINMGKADHKIGALNVYLSSSM 87 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F+G R E S +PLN YG +KLAGE +AS NY++LR + +S+ L + Sbjct: 88 IFNG-RRGFYGETSTPDPLNYYGVTKLAGEIGIAS-LGNYLVLRLGFPFSLSYRGLLYNH 145 Query: 163 LR 164 LR Sbjct: 146 LR 147 >gi|170290459|ref|YP_001737275.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174539|gb|ACB07592.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] Length = 331 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 3/111 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + S F PD I+N AA T VD++ +EP N G I + IP Sbjct: 58 DICDEEMLTSVIEEFRPDAIVNLAAETHVDRSINEPSPFIQTNIFGVYTILEVMRRRDIP 117 Query: 95 -CIYISTDYVFDGLSRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ LS I DE S NP + Y SK AG+ + +Y+ Y Sbjct: 118 LLLHLSTDEVYGDLSELGIEADESSNLNPSSPYSGSKAAGDLLIKAYSRTY 168 >gi|23321132|gb|AAN23071.1|AF461770_11 putative 6-deoxy-D-mannoheptose pathway protein [Yersinia pseudotuberculosis] Length = 277 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 11/182 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL---LKPKDFASFFLSFS-PDVIINP 57 K ++G+NG I +L ++E+I VGR + D+ L+ DF S D +I Sbjct: 3 KVFILGSNGYIGNNLMESLCDNIEVITVGRSNADIYINLESDDFQSLLNKVEFKDTVIFL 62 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 +A ++ D+ + ++ IN + ++ + + ++ S+D VF G ++ DE S Sbjct: 63 SAISSPDECNNNYNYSYKINVKNTISLISLLLAKNVRVMFSSSDAVF-GATQNLCDENSE 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG+ K + E + +++ ++R ++V G N SM + KE E + D Sbjct: 122 KKPFGKYGEMK-SEVEDYFTLEDDFFVVRFSYV---LGRNDKFSM--MIKEFYEQGKILD 175 Query: 178 QF 179 F Sbjct: 176 VF 177 >gi|297526827|ref|YP_003668851.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255743|gb|ADI31952.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 317 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ AA VD+ +P FSIN +G + + + + +Y S+ V+ PI Sbjct: 78 VVHLAALVGVDEVYRDPNSGFSINVQGTFNLLEMSRRHDVERFVYASSAAVYGDPQYLPI 137 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE P +P N+YG +KLAGE V +Y NY Sbjct: 138 DEDHPLSPKNLYGATKLAGEILVNTYMENY 167 >gi|330507327|ref|YP_004383755.1| NAD dependent epimerase/dehydratase [Methanosaeta concilii GP-6] gi|328928135|gb|AEB67937.1| NAD dependent epimerase/dehydratase [Methanosaeta concilii GP-6] Length = 295 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 11/120 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI + AA +V+ + + P + N G I + I I ++ YV+ P Sbjct: 62 DVIYHLAAIASVNSSYENPHDTYETNVLGTLNILELCRLYDINKIVYASSYVYGKPHYLP 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG----SNFLLSML 163 IDE TNP N Y +SKL GEE SY +++ ++LR ++I+G S+FL+ M+ Sbjct: 122 IDENHMTNPTNPYSRSKLIGEELCKSYHDDFGIECIVLRP---FNIYGPGQRSDFLIPMI 178 >gi|15898942|ref|NP_343547.1| dTDP-4-dehydrorhamnose reductase (rfbD-3) [Sulfolobus solfataricus P2] gi|284175484|ref|ZP_06389453.1| dTDP-4-dehydrorhamnose reductase (rfbD-3) [Sulfolobus solfataricus 98/2] gi|1707767|emb|CAA69439.1| orf c01037 [Sulfolobus solfataricus P2] gi|13815457|gb|AAK42337.1| dTDP-4-dehydrorhamnose reductase (rfbD-3) [Sulfolobus solfataricus P2] gi|261603359|gb|ACX92962.1| NAD-dependent epimerase/dehydratase [Sulfolobus solfataricus 98/2] Length = 255 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 26/207 (12%) Query: 4 LVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 + + + G++A++++ + + EII V P +++ K PDVII+ Sbjct: 3 IAVTDEGEVAKAIAKFLGGKGNEIIVVDNPS-KVIREK----------PDVIIHTFE-IP 50 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + ++ P +A+S N A IA+A G +++S+ ++DG R E + +PLN Sbjct: 51 IFESNANPPLAWSFNTWYAINIARAGSKAGSVNVFLSSFLIYDG-KRGFYKEHNTPHPLN 109 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL------SMLRLAKERREISVVC 176 YG +KL GE + S NY++LR ++S+ FL +M ++ K + + Sbjct: 110 YYGLTKLVGESSIIS-LGNYLVLRVGALFSLSYRGFLFPFIKASTMGKVLKCNKNFYISI 168 Query: 177 DQFGTPTSALQI-----ARAIIQIAHN 198 T +++ AR +I + N Sbjct: 169 IDLNTLAKVIKLLIDKEARGVINVGSN 195 >gi|149277579|ref|ZP_01883720.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149231812|gb|EDM37190.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 293 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 23/163 (14%) Query: 1 MKCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFA----------SFF 46 MK L+ G NG I QSL SM + VE+ R P+++ + F Sbjct: 1 MKILITGINGMLGGHIKQSLLSMDM--VELYGASRTAASENIPQEYMIGDLTVLESYTRF 58 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK--AADSIGIPCIYISTDYVF 104 + DVI++ AA + E + +A N + + D IYISTD VF Sbjct: 59 KNIHFDVIVHCAAEVNLSLCEKDWAVAELANVTSTSLLTSNLSFDRF----IYISTDSVF 114 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 DG S+ E T+PLN Y SKL GE V S ++++LRT Sbjct: 115 DG-SKGNYTETDQTHPLNNYALSKLKGEHVVTSSVGDFIVLRT 156 >gi|14601230|ref|NP_147763.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] gi|5104852|dbj|BAA80166.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] Length = 330 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 29/169 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEII-------------------RVGRPDIDLLKP 39 M+ LV G G I S V D E++ R+G D+ Sbjct: 1 MRVLVTGGAGFIGSSFVRYIVNTTDWEVLVYDKLTYAGRLENLHDVIDRIGFMRGDIADE 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADSIGIPC 95 + F F PDV++N AA T VD++ +EP N G AI K D I + Sbjct: 61 EQFGRVLTEFEPDVVVNFAAETHVDRSINEPAPFMRTNIIGVFTILEAIRKRIDQIVL-- 118 Query: 96 IYISTDYVFDGLSRTPID--EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T + E P NP + Y SK +G+ + +Y Y Sbjct: 119 LHVSTDEVYGDLWNTGKEATESDPLNPSSPYSASKASGDLLIKAYGRTY 167 >gi|221039802|dbj|BAH11664.1| unnamed protein product [Homo sapiens] Length = 228 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 12/177 (6%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---- 151 IYIS+DYVFDG + P E PLN+YGK+KL GE+ V +LR +Y Sbjct: 26 IYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVE 84 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + S + ++ + ++ Q PT +A Q+A + D S++G F Sbjct: 85 KLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTF 142 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 H + + + + A I A+ S R T A RP + LDCSKL Sbjct: 143 HWSGNEQMTKY-EMACAI----ADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKL 194 >gi|163853117|ref|YP_001641160.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] gi|163664722|gb|ABY32089.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] Length = 291 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 25/198 (12%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ A F PDV++N + ++P +A INA +A+ AD +G Sbjct: 52 IDVENADALAGFLREVRPDVVVNCVGVVKQLSSAEDPLVAIPINAILPHRLARLADLVGA 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I+ISTD VF G + E + ++YG+SKL GE Y N V LRT+ + Sbjct: 112 RLIHISTDCVFTG-RKGDYRESDVPDAEDLYGRSKLLGE---VDYPNA-VTLRTSIIGRE 166 Query: 154 FGSN------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 FGS FL + RR I S L + IA ++ N D L Sbjct: 167 FGSRNGLVEWFLSQSGSVRGYRRAI----------FSGLTTDELVRVIADRVLPNPD--L 214 Query: 208 RGIFHMTADGGPVSWADF 225 RG++H++ P+S D Sbjct: 215 RGVYHVSV--APISKFDL 230 >gi|293375313|ref|ZP_06621595.1| UDP-glucose 4-epimerase [Turicibacter sanguinis PC909] gi|325842511|ref|ZP_08167682.1| UDP-glucose 4-epimerase [Turicibacter sp. HGF1] gi|292646069|gb|EFF64097.1| UDP-glucose 4-epimerase [Turicibacter sanguinis PC909] gi|325489555|gb|EGC91919.1| UDP-glucose 4-epimerase [Turicibacter sp. HGF1] Length = 326 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 17/147 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +I+ AAY+ V ++ P + N G + KA + G+ I + ST + Sbjct: 68 DGVIHFAAYSLVGESMTNPFKYYDNNMSGTNVLLKAMEDCGVKNIVFSSTAATYGEAQNI 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR-----TAWVYSIFG------ 155 PI E PTNP N+YG++KLA E + ++ NYV LR A + G Sbjct: 128 PILETDPTNPTNVYGETKLAMERMINWYHKAHDTNYVSLRYFNVAGAHESGLIGEKHDPE 187 Query: 156 SNFLLSMLRLAKERRE-ISVVCDQFGT 181 ++ + +L++A RRE I+V D + T Sbjct: 188 THLIPIILQVASGRREAINVFGDDYET 214 >gi|289548767|ref|YP_003473755.1| UDP-glucose 4-epimerase [Thermocrinis albus DSM 14484] gi|289182384|gb|ADC89628.1| UDP-glucose 4-epimerase [Thermocrinis albus DSM 14484] Length = 327 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 16/154 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPD---------IDLLKPKDFASF 45 MK LV G G I + + V V+ + G+ + +DLL Sbjct: 1 MKVLVTGGAGYIGSHMVKLLGEKGYQVLVVDNLSTGKREAVLYGRLVVLDLLLYAPLEEL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L F PD++++ AA V ++ +P + N + + +A G+ I+ S+ V+ Sbjct: 61 MLDFRPDIVMHFAAKILVHESVRKPLEYYENNLQATWNLLRAMKRAGVKYMIFSSSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 S P+ E PT P+N YG SKL GE V + Sbjct: 121 GTPSSLPVKESDPTVPINPYGWSKLMGERMVEDF 154 >gi|163758798|ref|ZP_02165885.1| putative sulfolipid biosynthesis protein [Hoeflea phototrophica DFL-43] gi|162284088|gb|EDQ34372.1| putative sulfolipid biosynthesis protein [Hoeflea phototrophica DFL-43] Length = 294 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVI---- 54 MK LV G G + + + ++ ++ GR P D L PK + + PD I Sbjct: 1 MKALVTGGTGLVGRYIVETLLDAGYDVTVAGRTPPADDLFPKPVSFRHATLDPDGIGEDL 60 Query: 55 ---INPAAYTAVDK--------AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 I+ + A D D+PE +N +G+ + +AA G+ +++S+ Sbjct: 61 FTGIDAIVHAAFDHLPGRYRGGEGDDPEQFRRLNLDGSVKLFEAAKCAGVRRAVFLSSRA 120 Query: 103 VFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 V+DG++ TP+ E P P ++YG+ KL GE+ +A I + + ++G++ Sbjct: 121 VYDGITPSTPLTEDLPLKPASLYGEIKLLGEQALAGLNGPDFITASLRLTGVYGAH 176 >gi|119718401|ref|YP_925366.1| NAD-dependent epimerase/dehydratase [Nocardioides sp. JS614] gi|119539062|gb|ABL83679.1| NAD-dependent epimerase/dehydratase [Nocardioides sp. JS614] Length = 317 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 20/148 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGR-----PDI--------DLLKPKDFASFF 46 ++ V G +GQ + L+ + + VE+ + PD+ DL ++ + Sbjct: 5 LRAFVTGISGQDGRYLAERLLGEGVEVHALAHALEPLPDLPGVELHRGDLTAVEEVRALL 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGIPCIYI--ST 100 + +PD + N AA ++V ++ +EP++ +N A + ++A D +G P ++ S+ Sbjct: 65 VDVAPDEVYNLAALSSVARSWEEPDLTARVNGLAAAGLLESALQVQDKLGRPVRFVQASS 124 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 +F R+P DE +P P+N YG +K Sbjct: 125 AEIFGQPDRSPQDESTPLRPVNPYGAAK 152 >gi|91202893|emb|CAJ72532.1| similar to TDP-rhamnose synthetase, NAD(P)-binding [Candidatus Kuenenia stuttgartiensis] Length = 330 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 57/115 (49%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + A+ ++ + I++ A A+ E PE+A+ +N + A I K I Sbjct: 53 LDIEDVQGLAALMKTWKFNSILHAAGSCALKSCELNPEMAYRVNVQSAKNILKIIGDRTI 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++STD VF G S E +P+ +YGK+ + EE +A + VI R + Sbjct: 113 RLLFLSTDLVFPGKSSGCYTESDAVSPVTVYGKTMVMAEEIIAHEYPSAVIFRIS 167 >gi|255084107|ref|XP_002508628.1| predicted protein [Micromonas sp. RCC299] gi|226523905|gb|ACO69886.1| predicted protein [Micromonas sp. RCC299] Length = 327 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 31/197 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA-----KAADSIGIPCIYISTDYVFDG 106 D+++N AA ++ K E E E+A ++N + +++I +++STD V+DG Sbjct: 77 DLVVNCAAMSSPGKCEKEAELAMNLNVPTHLCRTLLEHNQKSEAIAPLLVHLSTDQVYDG 136 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--IFGS-------- 156 S +++ + +P+N YG+SKL E +A NYV R + S I GS Sbjct: 137 ESPNSVEDVNAPSPVNTYGRSKLNAELHIA---ENYVAGRHVSLRSSIITGSQPPLRPVS 193 Query: 157 -----NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 +F+++ L K ++ D++ P +A+ I I+ ++ +++ T + Sbjct: 194 RPLFHDFIVNSL---KGDEAVTFFEDEYRCPIAAVDIVAHIVALSKLAGKDAKTDWLMRY 250 Query: 212 HMTADGGP--VSWADFA 226 +M GGP +S D A Sbjct: 251 NM---GGPDRLSRVDMA 264 >gi|161527633|ref|YP_001581459.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338934|gb|ABX12021.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 295 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 18/191 (9%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDI-----------DLLKPKDFASFFLS 48 +K LV G +G + + S + D + + + + + D+ K F + Sbjct: 5 IKILVTGASGMLGNKIISELSNSDYQSLGISKKNTHTINNTIIKKCDITNYKQLKKIFDA 64 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P++II+ A+ T + E+ PE F +N G I G I+ S+ V+ G S Sbjct: 65 FKPNIIIHTASITGNIECEENPEKTFLVNCLGTFNILNLMKKNGAKIIFCSSREVY-GNS 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLLS-ML 163 + + E P+N+ G +K+ E + +Y YVILR Y S +S M+ Sbjct: 124 KKKVTEKDLEFPINLNGITKITSENLIKKFHQTYNVQYVILRFTNFYGDLNSKRGISLMI 183 Query: 164 RLAKERREISV 174 + A + +++++ Sbjct: 184 KNAIKNKQVTI 194 >gi|307102810|gb|EFN51077.1| hypothetical protein CHLNCDRAFT_141448 [Chlorella variabilis] Length = 332 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--- 152 I++STD V+DG S+ E P P+N YG++KLA E VA+ N+ ILR++ ++ Sbjct: 121 IHMSTDQVYDG-SKARWREGDPPRPVNAYGRTKLAAERAVAAGWPNHAILRSSIIFGPEP 179 Query: 153 --IFGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 G L + A + + D++ +P R I+++ LI D Sbjct: 180 PVPVGRPLFLQFIDGALAAGKPTTFFNDEWRSPIR----VRDILRVCQTLINRQDELQHR 235 Query: 210 IFHMTADGGP 219 +F+M GGP Sbjct: 236 LFNM---GGP 242 >gi|253999527|ref|YP_003051590.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] gi|253986206|gb|ACT51063.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] Length = 327 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 16/160 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDV---EIIRVGRPDI---------DLLKPKDFASF 45 MK LV+G G I + M + DV + + G D DL Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGHDVITFDNLSSGYRDAVVGGTFVQADLADKAALEEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F+ +PD +++ A+Y V ++ P+ + N + A G+ I+ ST VF Sbjct: 61 FVKHAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKHGVNYFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 PIDE NPLN YG+SKL E+ + Y Y I Sbjct: 121 GEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGI 160 >gi|317121557|ref|YP_004101560.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] gi|315591537|gb|ADU50833.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] Length = 322 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-GAIAKAADSIG 92 +D+ + A+ F F P+ +I+ AA +V+++ + P+ +N G + A + Sbjct: 61 LDVTEAAAVAAVFRDFGPEAVIHLAAQVSVERSLERPDRDVEVNVYGTLNVLRAAVAAGA 120 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTA 148 ++ S+ V+ R P+DE P PL++YG+SKL E + Y VILR Sbjct: 121 RRVVFASSAAVYGNPQRLPVDEEHPLEPLSVYGRSKLTAEWLIQQYARGTGLEAVILRLG 180 Query: 149 WVYS 152 VY Sbjct: 181 NVYG 184 >gi|312194080|ref|YP_004014141.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] gi|311225416|gb|ADP78271.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] Length = 346 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 69/293 (23%), Positives = 117/293 (39%), Gaps = 48/293 (16%) Query: 1 MKCLVIGNNGQIAQSLSSM------------------CV--QDVEIIRVGRPDIDLLKPK 40 M+ LV G++G I L + C + E + R DI KP+ Sbjct: 1 MRILVTGHDGYIGTRLIPLFRAAGHEVAGLDSGLFADCTLGTEPEAVPAVRADIRDAKPE 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 F F D +++ AA + + P+ + INA G A+ +AA G+ ++ S Sbjct: 61 HFEGF------DAVVHLAALSNDPLGDLNPQTTYDINAHGTVAVGRAAKEAGVGRFVFSS 114 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIF-- 154 + ++ PIDE + P+ YG+SK+ E+ +A ++ V LR A Y + Sbjct: 115 SCSLYGAHGDAPIDESAEFLPVTPYGESKVMAEQGLAELASDDFHPVFLRNATAYGVSPR 174 Query: 155 --GSNFLLSMLRLAKERREISVVCDQFGTPTSAL----QIARAIIQIAHNLIENSDTSLR 208 G + ++ A E+ + D GTP L IARA++ + +E Sbjct: 175 LRGDLVVNNLTGYALTTGEVRMKSD--GTPWRPLVHIEDIARAMLAVCEAPVEKIHLEAY 232 Query: 209 GIFHMTADGGPVSWADFAEYIFWES----AERGGPYSKVYRI----FTKQYPT 253 + + A+ E I S A+ GP + YR+ F +P+ Sbjct: 233 NVGRTAENYRIREVAEIVEEIVPNSKISFADSAGPDLRNYRVNCDRFADTFPS 285 >gi|315185993|gb|EFU19757.1| UDP-galactose 4-epimerase [Spirochaeta thermophila DSM 6578] Length = 324 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 9/125 (7%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 +RVG DL + F LSF PDV+++ AA+ V + + P F N G + + Sbjct: 46 LRVG----DLHDTEKFREVLLSFRPDVVMHFAAFIEVGISTERPLEFFENNTVGTIRLVQ 101 Query: 87 AADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----N 141 A G+ I+ ST V+ R PI E + P+N YG SK+ EE + S + Sbjct: 102 AMMHTGVHHFIFSSTAAVYGHPERVPISEDARLTPVNPYGSSKVMVEEFLRSLSEWSSFR 161 Query: 142 YVILR 146 YV +R Sbjct: 162 YVAIR 166 >gi|209515363|ref|ZP_03264229.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] gi|209504083|gb|EEA04073.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] Length = 329 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD +I+ AA V + D P A +N EG+ + +A G+ Sbjct: 55 DLCEWPQVLRLMEQHRPDAVIHAAAIVGVIQCADIPIKANRVNVEGSLNLFEAMRLTGVK 114 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAW 149 +++ST+ + + IDE NP ++YG +KLA E YT + + +RT W Sbjct: 115 RVVHVSTEETYGDFNAPLIDEEHAQNPTSVYGATKLAVEHYGRIYTREHGLECLNVRTCW 174 Query: 150 VYS 152 VY Sbjct: 175 VYG 177 >gi|146281201|ref|YP_001171354.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas stutzeri A1501] gi|145569406|gb|ABP78512.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas stutzeri A1501] Length = 212 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 4/186 (2%) Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VFDG T E PL+ G++ E+ V + +V+LR W+ L + Sbjct: 23 VFDGARTTAYSEKDEVAPLDARGQALWRIEQSVRALCPRHVLLRFGWLLDDSRDGVLGRV 82 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L+ ++ I + D+ G PT AR I+ + L + L G +H Sbjct: 83 LQRLEQSEAILLADDRRGNPTPVDDAARVILAVLKQL--DCQAPLWGTYHYGGHEASTPL 140 Query: 223 ADFAEYIFWESAE-RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A+ + E+A+ R +K+ + A P + L C K+ T I+ W+ Sbjct: 141 L-VAQALLGEAAKYRDVTTAKLTPVAHADCSDAAAEPQHGVLACKKIFTTFGIKPRAWRT 199 Query: 282 GVRNIL 287 G+ ++L Sbjct: 200 GLPSLL 205 >gi|149200332|ref|ZP_01877351.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155] gi|149136568|gb|EDM25002.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155] Length = 288 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 34/301 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII-------------RVGRPDIDLLKPKDFASFFLS 48 K L+ G +G + L+++ +D E+ + GR DL K + S Sbjct: 4 KVLITGIHGFLGTELANVLSEDYEVYGTYFNSSATSSSHKTGR--CDLRKLSEVKSVLDR 61 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P + + AA + + + E +++ IN + +++ GI ++ STD VFDG Sbjct: 62 VRPSKVFHLAALSDPNTCDREAKLSEEINFLASRLLSELCAERGIKLLFTSTDLVFDG-R 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLA 166 + E NPL+ Y + KL EE V ++ I R +YS + + + + Sbjct: 121 KGNYSEEDEVNPLSRYAEHKLMAEE-VMKGNDSASICRMPLMYSTADNKRSMVYGIKEKL 179 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADF 225 K R ++ + D++ + ++A++++ +SL G+ H+ GGP+ + + Sbjct: 180 KNREQVGLFTDEYRSAAHVNCASKALMKV---------SSLELGLVHL---GGPLRESRY 227 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + A P + K A RPA D S +A + I++ + E + Sbjct: 228 EMGLLIAEA-FSLPKYFIKPCLQKDVKMAAERPADVSFDNS-VAISKAIQLRSLSENLSK 285 Query: 286 I 286 + Sbjct: 286 L 286 >gi|27597153|dbj|BAC55147.1| UDP-glucose 4-epimerase EpsS [Methylobacillus sp. 12S] Length = 327 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 16/160 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDV---EIIRVGRPDI---------DLLKPKDFASF 45 MK LV+G G I + M + DV + + G D DL Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGHDVITFDNLSSGYRDAVVGGTFVQADLADKAALDEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F+ +PD +++ A+Y V ++ P+ + N + A G+ I+ ST VF Sbjct: 61 FVKHTPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKHGVNYFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 PIDE NPLN YG+SKL E+ + Y Y I Sbjct: 121 GEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGI 160 >gi|262193435|ref|YP_003264644.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365] gi|262076782|gb|ACY12751.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365] Length = 281 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 5/124 (4%) Query: 30 GRP--DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 GRP ++L A+ F PD++++ A V K E+ P+ A +N + Sbjct: 33 GRPWGRVNLQDRDRVAALFAREQPDMVLHCAGVCDVAKCEESPDFAHLVNVLSMDILLDH 92 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + IY+S+D+VF G S P E +P +PL++YG++++ E + + +I+R Sbjct: 93 LPA-HTRVIYLSSDHVFSGDS-GPYTESTPPDPLSVYGRTRVQAERILLDRRPDSLIIRG 150 Query: 148 A-WV 150 W+ Sbjct: 151 GLWI 154 >gi|302560218|ref|ZP_07312560.1| UDP-glucose 4-epimerase [Streptomyces griseoflavus Tu4000] gi|302477836|gb|EFL40929.1| UDP-glucose 4-epimerase [Streptomyces griseoflavus Tu4000] Length = 323 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 57 AAKWLDSSYDGVLHFAAFSQVGESVAKPEKYWDNNVGGTMALLGAMREAGVRRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 + + PI E +PT P N YG SKLA + + A++ V LR V +G Sbjct: 117 ATYGEPEQVPITESAPTRPTNPYGASKLAVDHMISGEAAAHGLGAVSLRYFNVAGAYGRQ 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RRE ISV D + TP Sbjct: 177 GERHDPESHLIPLVLQVAQGRRESISVYGDDYPTP 211 >gi|21221575|ref|NP_627354.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|256787233|ref|ZP_05525664.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|289771131|ref|ZP_06530509.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|8894770|emb|CAB95930.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|289701330|gb|EFD68759.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] Length = 321 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ +A G+ ++ ST Sbjct: 57 AAKWLDGSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVRRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + + PI E +PT P N YG SKLA + + A++ V LR A Y + Sbjct: 117 ATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSLRYFNVAGAYGEY 176 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A+ RRE ISV D + TP Sbjct: 177 GERHDPESHLIPLVLQVAQGRREAISVYGDDYPTP 211 >gi|145355883|ref|XP_001422176.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582416|gb|ABP00493.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 261 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 21/187 (11%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPC---IYISTDYVFDGLS 108 +IN AA ++ + E PE+A NA A AI+ A S G I +STD+V+DG Sbjct: 10 VINCAAMSSPGQCEAAPELARRANAPRALWSAISSIAQSRGKQAPLWIQLSTDHVYDG-E 68 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS 161 R DE + P+N YG SK+ EE +A ++LR+ A + + + FL Sbjct: 69 RALSDESTACAPVNAYGASKVFCEETLAKDYPRSIVLRSSIITGPKAPLTDVERTLFLDF 128 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 + + + D+F +P I R + + L + D R +++M GGP Sbjct: 129 IASSFAKETPTTFYDDEFRSPICVFDIVRVVRTL---LQRHDDLPDRRVYNM---GGPDR 182 Query: 220 VSWADFA 226 VS D A Sbjct: 183 VSRVDMA 189 >gi|311693524|gb|ADP96397.1| dTDP-4-dehydrorhamnose reductase-like protein [marine bacterium HP15] Length = 277 Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 26/239 (10%) Query: 52 DVIINPAAYTAVDKAEDEPE----IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N + AE++PE AFS+ A+A+ A G+ + +S+ YVFDG Sbjct: 37 DLIVNALWMADPEVAENDPEGVHMAAFSLPV----AMAEFARDRGMALLQLSSCYVFDGR 92 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 ++ +P P+N G + E+ + + ++ILRT W + F S A Sbjct: 93 KQSGYITSNPGQPVNELGNWQWECEQALRTLLPRHIILRTGWSLARFIRKVQAST--AAG 150 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + C G P S +AR I + L + + G + +A E Sbjct: 151 EILSLPGRCR--GQPVSVRDLARVIEAVVLQL--DCGAEVWGTYQ---------YAGAEE 197 Query: 228 YIFWE--SAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLANTHNIRISTWKEGV 283 +E A G P + P H P + L C+K+ NT I+ W+ G+ Sbjct: 198 INLYELGLAIAGLPGIPEGIRVVDEVPEWGHLEPVNTTLICTKIRNTFGIKQMPWRSGL 256 >gi|55379798|ref|YP_137648.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232523|gb|AAV47942.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 331 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 17/184 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AA + VD E++ ++A+ +N +G +A G I+ + V P Sbjct: 77 DVVMHLAAVSGVDDCEEKQDLAYEVNVQGTDNVAWFCRKTGAALIFPFSMAVIGDPQEFP 136 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--------------N 157 I P +PLN YG++KL E V +Y + + +++GS N Sbjct: 137 ITVDHPRDPLNWYGRTKLLNERDVETYADGAFPAHQFMISNLYGSHEIDGQTVSKGTVIN 196 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI--FHMTA 215 F ++ LA E + Q +ARA + L+E D G+ + + + Sbjct: 197 FFVNRA-LAGETLTVYEPGTQSRNFIHVKDVARAYVDSCERLLEQLDRGETGVEKYEIAS 255 Query: 216 DGGP 219 D P Sbjct: 256 DEDP 259 >gi|308813466|ref|XP_003084039.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus tauri] gi|116055922|emb|CAL58455.1| putative dTDP-4-dehydrorhamnose reductase (ISS) [Ostreococcus tauri] Length = 319 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 37/218 (16%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIA-------FSINAEGAGAIAKAADSIGIPC-I 96 F +P V++N AA +A E PE A F NA A A+ + S+ +P I Sbjct: 75 FDYGATPRVVVNCAAMSAPGACERNPEAAKLANAPRFLWNAVKAEALTR---SVQVPMWI 131 Query: 97 YISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEK-VASYTNNYVILRTAWVYSIF 154 +STD+V+DG R+P+ DE + T P+N YG SK+ E+ V V+LR++ I Sbjct: 132 QLSTDHVYDG--RSPLSDESTKTAPVNAYGASKVFCEDALVQDLGARAVVLRSSI---IT 186 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G L K+ + S D+F +P I + +A +LR +++M Sbjct: 187 GPKPPL------KDDEQTSFYEDEFRSPVCVHDICHIVRSLATR--AGPSPTLR-VYNM- 236 Query: 215 ADGGP--VSWADF----AEYIFWESAERGGPY-SKVYR 245 GGP VS D AEY+ AE Y SK+ R Sbjct: 237 --GGPDRVSRVDMANGVAEYLASGDAELESVYKSKIAR 272 >gi|303247689|ref|ZP_07333959.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] gi|302490961|gb|EFL50858.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] Length = 310 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 62/296 (20%), Positives = 118/296 (39%), Gaps = 40/296 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----------LLKPKDFASFFLSFSPD 52 L+ G NG I ++ +D +++ +G +D +L DF + P+ Sbjct: 7 LITGVNGFIGSHMARRLGRDYQVVGLGASSVDTRGLCQHYVQMMLPHPDFIQVLAQYQPE 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------GIPCIYI--STDYVF 104 ++ A +V + P + F G A+ + D++ G PC+++ S+ V+ Sbjct: 67 CCLHFAGSASVGTSFAHPGVDFQ---SGPAAVFQILDALRQNQGNGKPCLFLFPSSAAVY 123 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYSIFGSNFLL 160 ++ P+ E P NP++ YG K E+ + Y Y++LR ++S +G Sbjct: 124 GNPTKLPVAESDPINPISPYGYHKSMSEKLIEEFHTIYEVPYLVLR---IFSCYGPGLRK 180 Query: 161 SML-RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 +L L ++ +V G T + + ++ ++ +R +G Sbjct: 181 QLLWDLCRKIDSGTVELYGTGEETRDYIHVKDLAELVAVILRK---DIRNTVLNVGNGRE 237 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 VS A +S R + +F Q K P C DC+KL N +I+ Sbjct: 238 VSTRTVA-----DSMLRAMGREDLRPVFRGQ--GKTGDPLRWCCDCTKLHNLAHIK 286 >gi|220919837|ref|YP_002495140.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219952257|gb|ACL62648.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 320 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 13/183 (7%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 V+ + I+ +LS++ ++ R+ DL + F D +I+ AA V Sbjct: 29 VVATDLAISPALSALLAREP---RLAAAAADLGEWPQVLRLFEQHRVDAVIHAAAIVGVV 85 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +A D P A +N EG+ + +A G+ +++ST+ + IDE P+++ Sbjct: 86 QAADIPLKALRVNVEGSINLFEAMRLHGVKRVVHVSTEETYGDFQAPIIDEEHSQKPVSV 145 Query: 124 YGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 YG +KLA E Y+ + +RT WVY L LRL + E ++ + F Sbjct: 146 YGLTKLAVEHYGRVYSRESGLECINVRTCWVYGPH-----LPRLRLPRTFIEAALRGEAF 200 Query: 180 GTP 182 P Sbjct: 201 HQP 203 >gi|302880026|ref|YP_003848590.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] gi|302582815|gb|ADL56826.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] Length = 284 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 105/256 (41%), Gaps = 48/256 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-----------------IDLLKPKD 41 MK LV+G++G I ++ + + D ++ R + +D+ + Sbjct: 1 MKILVVGSSGMIGSTVLRVLSENNDSDVFGSIRDENCKRFFSESIAARLVAGVDVEQTDH 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 PDV++N A T D+P ++ IN +A +G I++STD Sbjct: 61 LVKLLDQIRPDVVVNCAGLTKHKPEADDPLVSIPINTLMPHRLAGLCKLVGARLIHVSTD 120 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 VF G R D+F+ ++YGKSK GE + + V LRT+ + S + L Sbjct: 121 CVFSGAKGRYVEDDFADAR--DVYGKSKALGE----LHYPHTVTLRTSTIGHELQSQYGL 174 Query: 161 SMLRLAKERREISVVCDQF------GTPTSAL-QIARAIIQIAHNLIENSDTSLRGIFHM 213 LA+E R C + G PT QI R + I N +L G++H+ Sbjct: 175 LDWFLAQEGR-----CKGYSRAIFSGLPTVVFAQIIRDFV------IPN--LALSGLYHI 221 Query: 214 TADGGPVSWADFAEYI 229 A P++ D I Sbjct: 222 AAK--PINKLDLLGLI 235 >gi|257483252|ref|ZP_05637293.1| lipopolysaccharide biosynthesis protein, putative [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 174 Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 10/172 (5%) Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL + G++ E+ V + +V++R W+ L L AKE E+ + D+ Sbjct: 2 PLGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRR 61 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG----PVSWADFAEYIFWESAE 235 G PT AR II I L + + L G +H + A E Sbjct: 62 GNPTPVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLALGQAVLTEARLLHPLA 119 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++ + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 120 IESPTAQAH----AARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 167 >gi|21244465|ref|NP_644047.1| UDP-glucose 4-epimerase [Xanthomonas axonopodis pv. citri str. 306] gi|21110131|gb|AAM38583.1| UDP-glucose 4-epimerase [Xanthomonas axonopodis pv. citri str. 306] Length = 389 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 27/164 (16%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++AQ +C+ D ++ + RP+ +D+ Sbjct: 1 MRILVTGGTGYIGSHTCVELAQRGHEVCIVDNLSNSSERVLDHLQHLMGFRPEFHRMDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P + A + D +++ AA AV ++ EP + F+ N G A+ +A + + C Sbjct: 61 AP-ELADLLIGKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAKV-CNL 118 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ +R+PIDE +P +N YG++KL EE + + Sbjct: 119 VFSSSATVYGDANRSPIDESAPLKAINPYGRTKLMMEEMIGDLS 162 >gi|89094881|ref|ZP_01167813.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] gi|89080838|gb|EAR60078.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] Length = 287 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 32/245 (13%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---GIPCIYISTDYVFDGLSRT 110 ++N A T VD E++P A+ IN E A I I I+ISTD V+ G+ Sbjct: 60 VVNLVALTNVDACEEDPYKAYQINTEFVDQCISAVQGILPKTIKFIHISTDQVYSGIG-- 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-------SNFLLSML 163 P E P+N+YG +KL ++ V ++LR + FG S+F ++ Sbjct: 118 PHLE-GNAYPINVYGLTKLLADKSVLRAEG--LVLRV----NFFGKSLIDGRSSFSDWVI 170 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM-TADGGPVSW 222 + +E+++I V D + +AL IA +I L++ GI+++ T+DG Sbjct: 171 QALREKKQIPVFEDVY---INALSIASLCEEIQCRLVDFKP----GIYNLGTSDGFSK-- 221 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AE F + + G + + + KA RP +D S N+ N + + ++ Sbjct: 222 ---AELAFAIARKFGFDEGYLSEVTVESVALKARRPNDMRMDVSHYQNSFNTNLPSLEQE 278 Query: 283 VRNIL 287 + I+ Sbjct: 279 LDRII 283 >gi|307316687|ref|ZP_07596130.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] gi|306897885|gb|EFN28628.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti AK83] Length = 328 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D++ + ++ PD +I+ AA V ++ +P ++ N G ++ A G+ Sbjct: 53 DIMDGRHLIEVIEAYQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRQTGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ PIDE +P P+N YGK+KL E +A Y NYV LR Sbjct: 113 KVIFSSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVSLR 169 >gi|78049415|ref|YP_365590.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037845|emb|CAJ25590.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 445 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 27/164 (16%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++A+ +C+ D ++ + RP+ +D+ Sbjct: 57 MRILVTGGTGYIGSHTCVELARRGHDVCIVDNLSNSSERVLDHLQHLMGFRPEFHRMDVR 116 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P + A +S D +++ AA AV ++ EP + F+ N G A+ +A + + C Sbjct: 117 AP-ELADLLISERIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAKV-CNL 174 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ +R+PIDE +P +N YG++KL EE + + Sbjct: 175 VFSSSATVYGDANRSPIDESAPLKAINPYGRTKLMMEEMIGDLS 218 >gi|228912108|ref|ZP_04075826.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 200] gi|228847535|gb|EEM92471.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 200] Length = 307 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 16/192 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDL----LKPKDFASFFLSF-SPD 52 MK VIG +G I + ++ + +V I +P ID+ + D A+ + D Sbjct: 1 MKIGVIGGSGFIGKHVTKELLARGYEVVIFDKFKPSIDVPFKEIDILDIATLRENLIDVD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSRT 110 +I+ AA VD E +N EG I + GI ++ S+ V+ DG+S Sbjct: 61 GVIHLAALVGVDNCRLNEEDVVRVNFEGTKNIVQVCTENGIEKLLFSSSSEVYGDGVS-V 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLS-MLRL 165 P E P + YGK+KL E+ + Y +N + +R ++++GS NF++S L+ Sbjct: 120 PFKENDIKIPKSAYGKAKLMSEDYLKEYVSNSLKIRVVRYFNVYGSQQNDNFVISKFLKQ 179 Query: 166 AKERREISVVCD 177 A ++I++ D Sbjct: 180 AHSGKDITIYGD 191 >gi|218897455|ref|YP_002445866.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] gi|228905448|ref|ZP_04069402.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 4222] gi|228968976|ref|ZP_04129920.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|218541889|gb|ACK94283.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] gi|228790720|gb|EEM38377.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|228854180|gb|EEM98884.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 4222] Length = 307 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 16/192 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDL----LKPKDFASFFLSF-SPD 52 MK VIG +G I + ++ + +V I +P ID+ + D A+ + D Sbjct: 1 MKIGVIGGSGFIGKHVTKELLARGYEVVIFDKFKPSIDVPFKEIDILDIATLRENLIDVD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSRT 110 +I+ AA VD E +N EG I + + GI ++ S+ V+ DG+S Sbjct: 61 GVIHLAALVGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS-V 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLS-MLRL 165 P E P + YGK+KL E+ + Y +N + +R ++++GS NF++S L+ Sbjct: 120 PFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLKQ 179 Query: 166 AKERREISVVCD 177 A +I++ D Sbjct: 180 AHSGEDITIYGD 191 >gi|319949396|ref|ZP_08023462.1| dTDP-4-dehydrorhamnose reductase [Dietzia cinnamea P4] gi|319436943|gb|EFV91997.1| dTDP-4-dehydrorhamnose reductase [Dietzia cinnamea P4] Length = 109 Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ L E++ GR ++D+ + + A + P V+IN AAYT Sbjct: 17 RVLVTGGRGQLGTHLR--LAHPGEVLAPGRDELDITRAESVAGYLDRHQPAVVINAAAYT 74 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 VD AE + A +N EG +A+A G+ Sbjct: 75 DVDGAETDESGAHLVNVEGPRILAEACRERGL 106 >gi|28896998|ref|NP_796603.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD 2210633] gi|153839167|ref|ZP_01991834.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ3810] gi|260362308|ref|ZP_05775275.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus K5030] gi|260897623|ref|ZP_05906119.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus Peru-466] gi|260899554|ref|ZP_05907949.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ4037] gi|28805206|dbj|BAC58487.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD 2210633] gi|149747339|gb|EDM58317.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ3810] gi|308087496|gb|EFO37191.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus Peru-466] gi|308108746|gb|EFO46286.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ4037] gi|308111340|gb|EFO48880.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus K5030] Length = 290 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 20/230 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+IN A +D+ E+ +N I I ++IS++ V+DGL+ P Sbjct: 58 DVVINCIAMANLDQCENNKLDCELVNTTFVTHIVDYLKDKDIKLVHISSNAVYDGLN-AP 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E S P+N YG K + + S NNY I R VY ++ + Sbjct: 117 YSENSLREPINYYGICKSNADYYIESNLNNYAIARPITVY---------GPRKIEQRDNP 167 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAH-----NLIEN-SDTSLRGIFHMTADGGPVSWADF 225 +S + + + S + I+ + H N I+ S + L+G+++++ D + D Sbjct: 168 VSFIVKKILSGESFDLVDDNIVNMIHVEDLSNAIKKLSLSDLKGVYNLSGDVSECRY-DL 226 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 I + G +K+ ++ + A RP + D K+ + NI Sbjct: 227 GIRI---AKIMGSDLNKINKVSGSNFKMAAKRPYNTSFDNKKMKSVLNIE 273 >gi|326913956|ref|XP_003203297.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Meleagris gallopavo] Length = 357 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ KP F + D++++ AA T VD + +N G + AA + Sbjct: 73 DICKPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEAKVE 132 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ Sbjct: 133 KFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSN 192 Query: 150 VY 151 VY Sbjct: 193 VY 194 >gi|196006161|ref|XP_002112947.1| hypothetical protein TRIADDRAFT_25365 [Trichoplax adhaerens] gi|190584988|gb|EDV25057.1| hypothetical protein TRIADDRAFT_25365 [Trichoplax adhaerens] Length = 305 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 97/248 (39%), Gaps = 18/248 (7%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P VII+ AA D E + E + +N + +A A +YIST+ VFDG S Sbjct: 64 FRPTVIIHSAAERRPDVVEQQLEASRQLNVVVSQNLASIAKEFNCFLLYISTNGVFDGKS 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEE-KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P NP N Y K GE+ + + + +LR ++Y + S L + Sbjct: 124 -PPYKPSDVPNPSNSYCIFKFEGEKATLQTLPKSSGVLRVPYLYGQVENLAECSCTALFQ 182 Query: 168 ----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW- 222 + SV PT IA I QI + +D RGI+H + + Sbjct: 183 AVLNNTKSKSVTDYGMRYPTLVDDIAIVIRQICEKALSEND--FRGIWHWSGSEALTKYQ 240 Query: 223 -ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +F P S + PT A R S LDCS L + R + ++ Sbjct: 241 MTKIMAEVFNLDFSHIKPAS--------EPPTGAKRSNNSQLDCSDLMKLNFGRHTPFRV 292 Query: 282 GVRNILVN 289 G++ L N Sbjct: 293 GIQECLRN 300 >gi|86748653|ref|YP_485149.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] gi|86571681|gb|ABD06238.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris HaA2] Length = 337 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 12/151 (7%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + +L + ++ EI+ VGR ++DL +F S PDV+I AA Sbjct: 12 RVWVAGHRGMLGSALVRRLSRENCEILTVGRDELDLRHQTKVQEWFSSERPDVVILAAAR 71 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDE---- 114 A + P S N + ++A + G+ +++S+ V+ L+ PI+E Sbjct: 72 VGGVLANSKYPASFLSDNLSIQDNVIQSAAAAGVKKLLFVSSSCVYPRLASQPIEEDALL 131 Query: 115 ---FSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PTN YG +K+AG + A+Y Y Sbjct: 132 TGALEPTN--RWYGVAKIAGMMQCAAYREQY 160 >gi|237799716|ref|ZP_04588177.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022571|gb|EGI02628.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 89 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLD 264 L GI+H+ A G VSW +A+Y+ + G P + + I T +YPT A RP S L+ Sbjct: 2 LCGIYHL-APAGEVSWHAYAQYVIDYARANGEPLAVETINPIGTAEYPTPAQRPLNSRLN 60 Query: 265 CSKLANTHNIRISTWKEGVRNILV 288 KL + ++ + W+ GV +L+ Sbjct: 61 TEKLRHNFSLHLPDWQSGVARMLM 84 >gi|167043216|gb|ABZ07924.1| putative NAD dependent epimerase/dehydratase family protein [uncultured marine microorganism HF4000_ANIW141K23] Length = 300 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 48/104 (46%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D + + AA T V + PE F +N G I K A+ +Y S+ V+ TP Sbjct: 69 DGVFHQAALTVVQDSFTRPEEYFDVNVHGTENIFKLANENKFKVVYASSSSVYGHKLETP 128 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I E + NP++ YGK+KL E Y+ + ++IFG Sbjct: 129 ITEDAERNPISPYGKTKLEAEHLAEKYSKLNTEIIGLRYFNIFG 172 >gi|325928983|ref|ZP_08190144.1| UDP-galactose 4-epimerase [Xanthomonas perforans 91-118] gi|325540672|gb|EGD12253.1| UDP-galactose 4-epimerase [Xanthomonas perforans 91-118] Length = 389 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 27/164 (16%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++A+ +C+ D ++ + RP+ +D+ Sbjct: 1 MRILVTGGTGYIGSHTCVELARRGHDVCIVDNLSNSSERVLDHLQHLMGFRPEFHRMDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P + A +S D +++ AA AV ++ EP + F+ N G A+ +A + + C Sbjct: 61 AP-ELADLLISERIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAKV-CNL 118 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ +R+PIDE +P +N YG++KL EE + + Sbjct: 119 VFSSSATVYGDANRSPIDESAPLKAINPYGRTKLMMEEMIGDLS 162 >gi|303257718|ref|ZP_07343730.1| UDP-glucose 4-epimerase [Burkholderiales bacterium 1_1_47] gi|331000998|ref|ZP_08324634.1| UDP-glucose 4-epimerase [Parasutterella excrementihominis YIT 11859] gi|302859688|gb|EFL82767.1| UDP-glucose 4-epimerase [Burkholderiales bacterium 1_1_47] gi|329569773|gb|EGG51537.1| UDP-glucose 4-epimerase [Parasutterella excrementihominis YIT 11859] Length = 339 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 20 CVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 V +E+I RP + D+ K F F D +IN A AV ++E +P + FS Sbjct: 42 VVDRIEMITGKRPTLVRGDIRDEKALEKLFADFPIDAVINFAGRKAVGESETDPLLYFSY 101 Query: 77 NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 N EG + + G+ ++ S+ V+ DE +P P+N YG SK EE Sbjct: 102 NVEGTIVLLRVMKKFGVKEFVFSSSATVYGDPGYDEFDENTPLAPINNYGLSKWMIEE 159 >gi|282163443|ref|YP_003355828.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282155757|dbj|BAI60845.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 321 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV+ + AA VD++ EP++ + IN G + +AA + I+ ST V+ Sbjct: 71 DVVFHLAAQIHVDRSVVEPKLTYDINVIGTQNVLEAARMYDVQKVIHASTSEVYGSTQYA 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P+DE P N + YG SK+A + SY N Y Sbjct: 131 PMDEDHPLNAPHPYGASKIAADRLCFSYINTY 162 >gi|224034499|gb|ACN36325.1| unknown [Zea mays] Length = 247 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 7/121 (5%) Query: 35 DLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 DL F + SF P V++N AA + E +P A + N ++ S G Sbjct: 61 DLRSGDGFEAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGN 118 Query: 94 P---CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I +STD V++G+ ++ E T P+N+YGKSK+A E+ + +NY ILR++ + Sbjct: 119 EDSLLIQLSTDQVYEGV-KSFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSII 177 Query: 151 Y 151 Y Sbjct: 178 Y 178 >gi|209965823|ref|YP_002298738.1| UDP-glucose 4-epimerase [Rhodospirillum centenum SW] gi|209959289|gb|ACI99925.1| UDP-glucose 4-epimerase [Rhodospirillum centenum SW] Length = 330 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + P +I+ AA T V ++ ++P + +N G+ + +AA G+ Sbjct: 51 DLTDRARLDEAFAEWRPSAVIHFAALTYVGESVEKPALYHHVNVGGSRTLVEAATDAGVD 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 ++ ST V+ RTPI E P P+N YG++KL Sbjct: 111 RLVFSSTAAVYGTPQRTPIAEDHPLRPINPYGETKL 146 >gi|307299960|ref|ZP_07579745.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] gi|306904849|gb|EFN35432.1| UDP-glucose 4-epimerase [Sinorhizobium meliloti BL225C] Length = 328 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + + PD +I+ AA V ++ +P ++ N G ++ A G+ Sbjct: 53 DILDGRHLIEVIEAHQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRQTGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ PIDE +P P+N YGK+KL E +A Y NYV LR Sbjct: 113 KVIFSSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVSLR 169 >gi|160902525|ref|YP_001568106.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] gi|160360169|gb|ABX31783.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] Length = 328 Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 14/134 (10%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 V+DV+++ + DL KD F ++ D + + AA++ V ++ EP F+ N Sbjct: 39 AVKDVQVV-----EGDLRNEKDIDYAFENYKIDEVYHFAAFSLVGESMTEPNKYFNNNIC 93 Query: 80 GAGAIAKAADSIGIPCIYI---STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G + K C YI ST V+ + PI E P NP NIYG+SKL E+ + Sbjct: 94 GTLNLLKNMQKH--KCRYIVFSSTAAVYGEPEKVPITENQPKNPTNIYGQSKLMIEDILN 151 Query: 137 SYTN----NYVILR 146 Y+ YV LR Sbjct: 152 WYSKLDIIRYVALR 165 >gi|290959795|ref|YP_003490977.1| UDP-glucose 4-epimerase [Streptomyces scabiei 87.22] gi|260649321|emb|CBG72436.1| UDP-glucose 4-epimerase [Streptomyces scabiei 87.22] Length = 320 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 57 AAKWLDDSFDAVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLAAMREAGVRKLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 + TPI E +PT P N YG SKLA + + A++ V LR V +G Sbjct: 117 ATYGEPETTPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSLRYFNVAGAYGTC 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RR+ ISV D + TP Sbjct: 177 GERHDPESHLIPLVLQVAQGRRDAISVFGDDYPTP 211 >gi|329893629|ref|ZP_08269763.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] gi|328923556|gb|EGG30868.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] Length = 293 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%) Query: 93 IPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I ++ S+ +VF G + P E + + G+ + A E+ V T+N +ILR + Y Sbjct: 91 IVYLFQSSAWVFSGTVEDAPWTESDQPDEESNLGRVRRAAEQAVKDMTSNSIILRLSPTY 150 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 S G L+ ML+ I++ Q+ P SA AR I I + S+ RG+F Sbjct: 151 SAQGEGVLVKMLQRFGRGERIALSDSQYFNPISADDGARVIAAILDQVGSGSNN--RGVF 208 Query: 212 HMTADGGPVSWADFAEYIF 230 H ++ S+ +F E +F Sbjct: 209 HYGSN-ERASYYEFGEAVF 226 >gi|328463046|gb|EGF34828.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus helveticus MTCC 5463] Length = 144 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 29/143 (20%) Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-- 219 ML++ E+ VV DQ GTPT +AR ++ ++IE T G +H T P Sbjct: 1 MLKVGANHDEVKVVDDQIGTPTYTFDLARLLV----DMIE---TDKYGYYHATNSELPTS 53 Query: 220 -------------VSWADFAEYIFWESAERGGPY-SKVYRIFTKQYP-TKAHRPAYSCLD 264 +SW DF + I+ R Y +KV + T +Y +KA RP S LD Sbjct: 54 GGDHDANGTKTSYISWYDFTKEIY-----RQADYDTKVTPVTTAEYGLSKAVRPFNSRLD 108 Query: 265 CSKLANTHNIRISTWKEGVRNIL 287 SKL + + W + V L Sbjct: 109 KSKLVDNGFKPLPLWTDAVHRYL 131 >gi|159042020|ref|YP_001541272.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920855|gb|ABW02282.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 301 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+I+ AAY V ++ P N G +A G P ++IS+ V+ R P Sbjct: 70 DVVIHAAAYIDVHESMQRPADYVRNNVVGTTVVAHECLRHGKPMVFISSAAVYGNPVRLP 129 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYS 152 I E P P++ YG SK+ EE V + +VILR VY Sbjct: 130 IPEDHPLRPISPYGLSKVLSEEVVRFFGGLGLRFVILRPFNVYG 173 >gi|16264189|ref|NP_436981.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti 1021] gi|15140314|emb|CAC48841.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti 1021] gi|301602492|gb|ADK79128.1| UDP-xylose 4-epimerase [Sinorhizobium meliloti] Length = 328 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + + PD +I+ AA V ++ +P ++ N G ++ A G+ Sbjct: 53 DILDGRRLIEVIEAHQPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRQTGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ PIDE +P P+N YGK+KL E +A Y NYV LR Sbjct: 113 KVIFSSSCATYGVPAVLPIDEATPQAPINPYGKTKLVAEHMLADYAAAFALNYVSLR 169 >gi|83594066|ref|YP_427818.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] gi|83576980|gb|ABC23531.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] Length = 301 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D + P A + P V++N +P +A ++NA +A + + Sbjct: 54 VDAMAPGSLADLLDALRPAVVVNAIGIIKQRPEAQDPVVAITVNALFPQILANLCRARTL 113 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 I++STD VF G + DE SP P ++YG+SKL GE Sbjct: 114 RLIHLSTDCVFSGTAGG-YDEDSPAAPPDLYGRSKLLGE 151 >gi|262277573|ref|ZP_06055366.1| RmlD substrate binding domain superfamily protein [alpha proteobacterium HIMB114] gi|262224676|gb|EEY75135.1| RmlD substrate binding domain superfamily protein [alpha proteobacterium HIMB114] Length = 282 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 11/180 (6%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I+ ++T +K + ++++ IN + K I I+ S++YVF G + Sbjct: 60 IVFLISFTRPEKCFLKKKLSYEINVKKTKKFLKYLIKRKIYFIFFSSEYVFSGKNNKKYR 119 Query: 114 EFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAKERR 170 E N YG +K+ E + T N+ ILR VY S+ ++F ++++ +K+ + Sbjct: 120 ENDKKNSRMTYGLNKIEIESFLNRQLTKNFSILRLGKVYDNSLSDNSFFSNLIKYSKKNK 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + V DQ+ +P +R +++I ++ + G F++ D S +FA+ +F Sbjct: 180 SVYVADDQYFSPV----FSRDLVKIIDIFLK---KQIAGTFNICGDQS-FSRYEFAQKLF 231 >gi|254478563|ref|ZP_05091937.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035492|gb|EEB76192.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 311 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 20/173 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----DLLKPKDFA-----SF 45 MK LV G G I ++ + + + V+ + G+ + + KD A Sbjct: 1 MKVLVTGGAGFIGSNIVDLLIGNGHGVVIVDNLSTGKEEFINKKAIFYKKDIADDDLYEI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F PD +I+ AA V K+ + P +N G + + G+ +Y S+ V+ Sbjct: 61 FEKEEPDYVIHQAAQIDVQKSVNNPAFDAKVNILGTVNLLECCRKSGVKKIVYASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 PIDE NP++ YG SK E Y+ Y ILR A VY I Sbjct: 121 GNPEYLPIDEVHKINPISYYGISKHTAEHYFEVYSQLYGLKYTILRYANVYGI 173 >gi|163741964|ref|ZP_02149353.1| NAD dependent epimerase/dehydratase f [Phaeobacter gallaeciensis 2.10] gi|161384685|gb|EDQ09065.1| NAD dependent epimerase/dehydratase f [Phaeobacter gallaeciensis 2.10] Length = 252 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 D E++R DL P + A P D++I+ AA V P AF++NA G Sbjct: 15 DAEVLRN---TADLTNPHEVAQAIERAGPLDLVIHLAAIVPVQSVRANPGAAFAVNAGGT 71 Query: 82 GAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASY 138 + A D + S+ +V+ TP+ E T P+++YG++KL E+ ++ + Sbjct: 72 INLLTALDGSPARMLLCSSSHVYAS-QETPLRETDTTEPVSLYGQTKLMSEQAARQICAA 130 Query: 139 TNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 T + + A ++SI + S LR E+R Sbjct: 131 TGRSLCI--ARLFSIHDPDQTGSYLRPTLEKR 160 >gi|260887634|ref|ZP_05898897.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|260862650|gb|EEX77150.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 313 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 23/206 (11%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L +D + + D I++ AA T VD + P + N G + +AA + Sbjct: 52 EMDILD-EDLPKVVAAGAFDAIVHLAAQTMVDTSIKNPLLDTRENLMGTVQVLEAARAAN 110 Query: 93 IP-CIYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVIL 145 + I+ ST + + P+ E PT P++ YG SKL+ E+ + Y YV+L Sbjct: 111 VKRVIFASTAAAYGDVKEDDLPVREAQPTEPMSFYGLSKLSVEKYLEMYRKIYGMEYVVL 170 Query: 146 RTAWVYSIF----GSNFLLSML-RLAKERREISVVCDQFGTP--TSALQIARAI------ 192 R A VY G ++S+ + E R+I++ D T A IA I Sbjct: 171 RFANVYGERQGDGGEGGVISIFAKAVAEGRDITIYGDGEQTRDFVYAGDIAEGILAALRT 230 Query: 193 --IQIAHNLIENSDTSLRGIFHMTAD 216 + A+NL ++TSLR + + A+ Sbjct: 231 EEVNAAYNLSTQTETSLRELVSLLAE 256 >gi|323345012|ref|ZP_08085236.1| NAD-dependent epimerase/dehydratase [Prevotella oralis ATCC 33269] gi|323094282|gb|EFZ36859.1| NAD-dependent epimerase/dehydratase [Prevotella oralis ATCC 33269] Length = 311 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 24/172 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD--IDLLKPKDFASF------- 45 MK L+ G G I L + + ++ + +G+ + I LLK K+F F Sbjct: 1 MKILITGGAGFIGSHLCDRLISEDNMIIAIDNLVLGKKENIIHLLKDKNFKFFKVDILHT 60 Query: 46 ------FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 F + D++ + AA + + K D+P + +++ + + ++ + Sbjct: 61 ETMRHIFKEYEFDMVYHLAANSDIQKGGDDPLVDYNLTFNTTFHLLLLMKEFKVKKLFFA 120 Query: 100 TDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + G + +DE F P NP++ YG KLA E +++++N Y I W+ Sbjct: 121 STSAIFGETTGKLDENFGPLNPVSNYGAGKLASEAFISAFSNTYNI--QTWI 170 >gi|317483780|ref|ZP_07942721.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] gi|316924973|gb|EFV46118.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] Length = 306 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 E P +AF +N + AA + G+ ++S+ ++ S P+ E +P +P IYG Sbjct: 83 EQNPPLAFQVNFRSTQVLLDAAVACGVKRFFFMSSISLYSPTSVEPVPEDAPKDPATIYG 142 Query: 126 KSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNFLLS 161 ++KLAGE + Y +N+ I +R WV+ +N L + Sbjct: 143 QTKLAGEHLLRWYADNHGIDSRGIRPTWVWGPNRTNGLTT 182 >gi|50730649|ref|XP_416988.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Gallus gallus] Length = 357 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ +P F + D++++ AA T VD + +N G + AA + Sbjct: 73 DICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVE 132 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ Sbjct: 133 KFVYVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSN 192 Query: 150 VY 151 VY Sbjct: 193 VY 194 >gi|294629814|ref|ZP_06708374.1| UDP-glucose 4-epimerase [Streptomyces sp. e14] gi|292833147|gb|EFF91496.1| UDP-glucose 4-epimerase [Streptomyces sp. e14] Length = 322 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 57 AAKWLDASYDAVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLAAMREAGVRRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + TPI E PT P + YG SKLA + + A++ V LR A Y + Sbjct: 117 ATYGEPVSTPITETDPTAPTSPYGASKLAVDHMITGEAAAHGLGAVSLRYFNVAGAYGAY 176 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A+ RR+ ISV D + TP Sbjct: 177 GERHQPESHLIPLVLQVAQGRRDAISVYGDDYPTP 211 >gi|163846690|ref|YP_001634734.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222524495|ref|YP_002568966.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] gi|163667979|gb|ABY34345.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222448374|gb|ACM52640.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] Length = 285 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 8/166 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + P VI++ A+ D P++ ++ EGAG +A AA IG Sbjct: 50 LDLRDAAAVMALIREVQPTVIVH-TAFRQYD-----PDL-MAVTGEGAGHVAVAAAQIGA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++S+D +FDG P E P NP+ YG++K E V + I+RT+ +Y Sbjct: 103 RLIHMSSDVIFDGEKGEPYTEDDPPNPITDYGRAKARAEALVQAAYPAAAIVRTSLIYGF 162 Query: 154 FGSNFLLSM-LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 + + L +A+ R + D+F P +A A+I +A Sbjct: 163 EPMDRHTAFALAVARGERPERLFRDEFRCPIFVDDLAVALIDLAQR 208 >gi|294664124|ref|ZP_06729515.1| UDP-glucose 4-epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606101|gb|EFF49361.1| UDP-glucose 4-epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 389 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 27/161 (16%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++A+ MC+ D ++ + RP+ +D+ Sbjct: 1 MRILVTGGTGYIGSHTCVELARRGHEMCIVDNLSNSSERVLDHLQHLMGFRPEFHRMDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P + A + D +++ AA AV ++ EP + F+ N G A+ +A + + C Sbjct: 61 AP-ELADLLIGKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAKV-CNL 118 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 ++ S+ V+ + +PIDE +P +N YG++KL EE + Sbjct: 119 VFSSSATVYGDANHSPIDESAPLKAINPYGRTKLMMEEMIG 159 >gi|156937783|ref|YP_001435579.1| NAD-dependent epimerase/dehydratase [Ignicoccus hospitalis KIN4/I] gi|156566767|gb|ABU82172.1| NAD-dependent epimerase/dehydratase [Ignicoccus hospitalis KIN4/I] Length = 293 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +++ + AA +++ EP +N EG + +AA ++ ST V+ P Sbjct: 59 ELVYHLAAEIKAEESLREPAKVVRVNVEGTLNVLEAARLADASVVFASTAAVYGEAKVVP 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 + E P P+N+YG +K+AGE V SY + + AW +F Sbjct: 119 VPEEHPLEPVNVYGATKVAGEALVNSYRKAFGL--RAWTLRLF 159 >gi|330837996|ref|YP_004412576.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|329745760|gb|AEB99116.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 310 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 23/206 (11%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L +D + + D I++ AA T VD + P + N G + +AA + Sbjct: 49 EMDILD-EDLPKVVAAGAFDAIVHLAAQTMVDTSIKNPLLDTRENLMGTVQVLEAARAAN 107 Query: 93 IP-CIYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVIL 145 + I+ ST + + P+ E PT P++ YG SKL+ E+ + Y YV+L Sbjct: 108 VKRVIFASTAAAYGDVKEDDLPVREAQPTEPMSFYGLSKLSVEKYLEMYRKIYGMEYVVL 167 Query: 146 RTAWVYSIF----GSNFLLSML-RLAKERREISVVCDQFGTP--TSALQIARAI------ 192 R A VY G ++S+ + E R+I++ D T A IA I Sbjct: 168 RFANVYGERQGDGGEGGVISIFAKAVAEGRDITIYGDGEQTRDFVYAGDIAEGILAALRT 227 Query: 193 --IQIAHNLIENSDTSLRGIFHMTAD 216 + A+NL ++TSLR + + A+ Sbjct: 228 EEVNAAYNLSTQTETSLRELVSLLAE 253 >gi|289450928|gb|ADC93845.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Canicola] Length = 283 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 9/155 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVII 55 K L+IG I +L + +D ++ R +DL +D S+ +S + D + Sbjct: 3 KILIIGGKSSIGVALENYFCKDYFVVCSSRSKEKKYYYLDL--AEDLDSWEISENFDYVF 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A ++V ++ P + + +N E A+ K G I+ ST VF+GL P E Sbjct: 61 FCAGISSVKICKENPILTYKVNVEHTVALIKKLIKSGSKIIFFSTSLVFNGLHPNP-KEK 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +P+ YG+ K E+K+ + ++N I+R V Sbjct: 120 DIVSPICEYGRLKSETEKKILNLSDNVSIIRMTKV 154 >gi|298529089|ref|ZP_07016492.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] gi|298510525|gb|EFI34428.1| NAD-dependent epimerase/dehydratase [Desulfonatronospira thiodismutans ASO3-1] Length = 506 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 9/136 (6%) Query: 2 KCLVIGNNGQIAQSL----SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + L++G +G I +L S EI+ + L +P+D S+ ++ PD I+N Sbjct: 129 RGLIVGGSGLIGGTLMHYFKSQHGDAYEILAPNSKRLSLREPEDIKSYLETYRPDFIVN- 187 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 A+ + P++A+ +N G+ +A+AA ++ +P I+ S+ + DE+ P Sbjct: 188 ---CAIPPLDGGPQLAYEVNYLGSINLARAAMALRVPFIHFSSAALQPMGENVAEDEYLP 244 Query: 118 -TNPLNIYGKSKLAGE 132 + + Y +SKL E Sbjct: 245 LSTSMPFYPRSKLMAE 260 >gi|224043150|ref|XP_002196929.1| PREDICTED: similar to TDP-glucose 4,6-dehydratase [Taeniopygia guttata] Length = 354 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ +P F + D++ + AA T VD + +N G + AA + Sbjct: 70 DICEPDFIKQLFETEKIDIVFHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVE 129 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ Sbjct: 130 KFVYVSTDEVYGGSTDEEFDESSPKRPTNPYASSKAAAECFVQSYWERYQFPVVITRSSN 189 Query: 150 VY 151 VY Sbjct: 190 VY 191 >gi|284047225|ref|YP_003397565.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] gi|283951446|gb|ADB54190.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] Length = 331 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D ++N AA T VD++ EP+ N +G + +AA + G+ + ISTD V+ + Sbjct: 71 DAVVNFAAETHVDRSIAEPDAFVVTNGQGTYVLLEAARAAGVRYVQISTDEVYGSIEEGS 130 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E SP P + Y +K + V SY + Y Sbjct: 131 FTEESPLQPSSPYSATKTGADLLVTSYFHTY 161 >gi|163739511|ref|ZP_02146921.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] gi|161387264|gb|EDQ11623.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] Length = 234 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 R DL P + A P D++I+ AA V P AF++NA G + A D Sbjct: 2 RNTADLTNPHEVAQAIERVGPLDLVIHLAAIVPVQSVRANPGAAFAVNAGGTINLLTALD 61 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILR 146 + S+ +V+ TP+ E T P+++YG++KL E+ ++ + T + + Sbjct: 62 GSPARMLLCSSSHVYAS-QETPLRETDTTEPVSLYGQTKLMSEQAARQICAATGRSLCI- 119 Query: 147 TAWVYSIFGSNFLLSMLRLAKERR 170 A ++SI + S LR E+R Sbjct: 120 -ARLFSIHDPHQTGSYLRPTLEKR 142 >gi|240167775|ref|ZP_04746434.1| dTDP-glucose 4,6-dehydratase [Mycobacterium kansasii ATCC 12478] Length = 331 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 9/102 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA T VD A D+PE N G I +A G+ +ISTD V+ L P Sbjct: 72 DAVVHFAAETHVDNALDDPEPFLHTNVIGTYTILEAVRRYGVRLHHISTDEVYGDL---P 128 Query: 112 ID------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +D E +P NP + Y SK AG+ V ++ +Y + T Sbjct: 129 LDDPQRFTESTPYNPSSPYSASKAAGDMLVRAWVRSYGVRAT 170 >gi|301165533|emb|CBW25104.1| putative dTDP-4-dehydrorhamnose reductase [Bacteriovorax marinus SJ] Length = 332 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++ +F PD+ I ++V + P++A ++NA G + + Sbjct: 58 DVLNKEEVQLALYAFKPDITIYAVGLSSVMECSRNPDLADALNASGLFNVVEYCQRYKSQ 117 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 Y+S+ +VF G + I+ P +P +YGK++ + E + + NY+I R+ +Y Sbjct: 118 VCYLSSGFVFAGEDKQYIEMDIP-DPNTVYGKTQASAEFYIQKSSLNYIIFRSCKLY 173 >gi|147921179|ref|YP_685010.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110620406|emb|CAJ35684.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 306 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 10/126 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ KP L D++ + AA + VD + P F NA G + + A G+ Sbjct: 53 DITKPVSIEG--LCKEVDIVYHLAAISNVDASIRNPIRTFETNAMGTANVLEEARKAGVK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAW 149 +Y+S+ +V+ PIDE P P Y SK+A E V +Y N+ Y ILR Sbjct: 111 KFVYVSSAHVYGVPQYLPIDEKHPVVPREAYAASKIAAENIVQAYGNSYGIEYAILRP-- 168 Query: 150 VYSIFG 155 ++IFG Sbjct: 169 -FNIFG 173 >gi|320335331|ref|YP_004172042.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] gi|319756620|gb|ADV68377.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] Length = 329 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIG 92 +DLL PD I++ AA V ++ EP + N G+ + +A A+++ Sbjct: 50 VDLLDYSAVKDTLARVRPDAIVHFAALIEVGESMKEPARYYRNNVTGSLNLLQANAETVK 109 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 P ++ ST V+ TPI E +P P ++YG++KL E + ++ + I Sbjct: 110 APIVFSSTAAVYGDAQSTPIPEDAPKAPTSVYGETKLMTEHMLNAFDRAHGI 161 >gi|148658677|ref|YP_001278882.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] gi|148570787|gb|ABQ92932.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] Length = 282 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 7/119 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL +PDV+I+ AY ++ P++ +I EG+ A+A+ A ++ Sbjct: 51 LDLRNAAATRRLVEQVTPDVVIH-TAYR-----QEGPDM-MAIIGEGSAAVAQGAFAVQA 103 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I++S+D VFDG E P+ YG +K E VA+ +I+RT+ +Y Sbjct: 104 RLIHLSSDVVFDGERIGRYTETDEPQPVTTYGAAKALSERLVAAAHPGALIVRTSLIYG 162 >gi|281347399|gb|EFB22983.1| hypothetical protein PANDA_007189 [Ailuropoda melanoleuca] Length = 253 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 19 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEAGVEKFIYVSTDEVYGGSLDK 78 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 79 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVY 123 >gi|70985224|ref|XP_748118.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus Af293] gi|66845746|gb|EAL86080.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus Af293] Length = 304 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP+D + L + V ++ AA + D + PE A +N + +A+ + Sbjct: 46 DLEKPEDIKNL-LDEAKLVPLHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKAL 104 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G P + + +P N YG+ K GE V T + ++LR + Sbjct: 105 LVYISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPLL 164 Query: 151 YSIFGSN 157 Y +N Sbjct: 165 YGTAQNN 171 >gi|170025396|ref|YP_001721901.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis YPIII] gi|169751930|gb|ACA69448.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis YPIII] Length = 319 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 18/168 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDID-----LLKPKDFASFFLSF-SP 51 MK +IG +G I +L+ + + D I+ + D+ D+ S + Sbjct: 1 MKIALIGGSGFIGTNLARLLIDNSVDFSILDKVKSDVYPERWVYCDVTDYDSLISTLIGH 60 Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D+IIN AA K P + + +N EGA I +AADS+ I I ++ G Sbjct: 61 DLIINLAA---EHKDNVNPISLYYQVNVEGAKNICRAADSLNIKNIVFTSSVAVYGFVEK 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSI 153 DE P N YGKSKL E+ S+ N+ V LR V+ I Sbjct: 118 DTDESGKYAPFNHYGKSKLEAEKVYDSWFNSSADKKLVTLRPTVVFGI 165 >gi|310643727|ref|YP_003948485.1| nad dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] gi|309248677|gb|ADO58244.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] Length = 309 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 20/171 (11%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRP---------DIDLLKPKDFASF 45 MK LV G G I L S + V ++ + G I ++ + + Sbjct: 1 MKALVTGGAGFIGSQLVRALADSGIRVHVLDNLTTGNAANVDPRAVMHIADIRSSEARTL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 + SPD++ + AA V + P+ +N G + +A G+ I+ ST V+ Sbjct: 61 LIRESPDIVFHLAAQADVQHSIHHPDEDADVNVLGTIHLLQACREAGVSKIIFASTSGVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVY 151 L + I E P P++ YG SKL E + Y NY ILR VY Sbjct: 121 GELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTILRYGNVY 171 >gi|307721409|ref|YP_003892549.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] gi|306979502|gb|ADN09537.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] Length = 291 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 22/223 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVG-----RPD---IDLLKPKDFASFFLSFSP 51 K LV+G+ G I + + D E+ + + D +D+ +F + S P Sbjct: 4 KVLVLGSTGLIGHQIYNYLKLNSDYELFNMSYRKKLQDDTILVDVRDENNFLNIIKSLKP 63 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I+N ++ A + PE A INA +A+ A + I+ISTD VF G + P Sbjct: 64 DYIVNCIG-ILINGANENPENAIFINAYMPHRLARLAGELDAKLIHISTDCVFSGNKKEP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + + Y K+K GE + ++ LRT+ V + ++ Sbjct: 123 YVESDEKDGKDTYAKTKGLGE----IIDDKHLTLRTSVVGPELKEDGEELFHWFMNQKGT 178 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 I+ + + L++A+A+ N + G++H+T Sbjct: 179 INGFTKAIWSGVTTLELAKAVKWAVEN-------DITGLYHIT 214 >gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] Length = 311 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGR---------PDIDLLKPKDFASF 45 MK LV G G I L S + V ++ + G I ++ + + Sbjct: 1 MKALVTGGAGFIGSQLVRALADSGIRVHVLDNLTTGNITNVDPRAVMHIADIRSSEARTL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 + SPD++ + AA V ++ P+ +N G + +A G+ I+ ST V+ Sbjct: 61 LIRESPDIVFHLAAQADVQQSIHRPDEDADVNVLGTIHLLQACHEAGVSKFIFASTSGVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVY 151 L + I E P P++ YG SKL E + Y NY ILR VY Sbjct: 121 GELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTILRYGNVY 171 >gi|94263018|ref|ZP_01286837.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] gi|93456561|gb|EAT06669.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] Length = 410 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 9/141 (6%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 M + E++ + L P+D + F P+ IIN A T++D + P +A+ Sbjct: 33 FKKMADDEFELLAPNSKRLSLRDPEDVRGYCQRFKPEFIIN-CAITSLDSS---PLLAYE 88 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP-LNIYGKSKLAGEEK 134 N GA +A+AA +GIP I+ S+ V D NP L Y KSKL E Sbjct: 89 TNYLGAIHLARAAIELGIPYIHFSSAAVLPPGQNLDEDWPLQLNPQLPNYPKSKLLAELA 148 Query: 135 V----ASYTNNYVILRTAWVY 151 + Y +Y I+R A VY Sbjct: 149 LDKLHRQYGLDYTIIRLAVVY 169 >gi|126736253|ref|ZP_01751996.1| UDP-glucose 4-epimerase [Roseobacter sp. CCS2] gi|126714419|gb|EBA11287.1| UDP-glucose 4-epimerase [Roseobacter sp. CCS2] Length = 338 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 F P+ +++ A AV ++ +P + +N G + +A G ++ S+ V+ Sbjct: 72 FQPEAVVHFAGLKAVGESTQKPLHYYDVNVAGTLTLLRAMGRAGCHRIVFSSSATVYGEP 131 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILR 146 P DE PTNP+++YG+SKL E+ + +T Y V+LR Sbjct: 132 VYLPYDEAHPTNPMSVYGRSKLIAEQVLTDWTAAYPDTTAVLLR 175 >gi|296114230|ref|ZP_06832885.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC 23769] gi|295979306|gb|EFG86029.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter hansenii ATCC 23769] Length = 356 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 13/139 (9%) Query: 17 SSMCVQDVEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 SS ++D R R + D+ P A F + PD +++ AA + VD++ D P+ Sbjct: 39 SSEALEDSATNRRYRSERHDITDPAAMARLFAHYQPDAVMHLAAESHVDRSIDGPDTFVR 98 Query: 76 INAEGAGAIAKAAD----------SIGIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNI 123 N G + AA +ISTD VF G P E +P +P + Sbjct: 99 TNVMGTSVLLDAARHYWQALDRAAQARFRFHHISTDEVFGALGAQDAPFTETTPYDPRSP 158 Query: 124 YGKSKLAGEEKVASYTNNY 142 Y SK A + V ++ + Y Sbjct: 159 YSASKAASDHMVRAWHHTY 177 >gi|77165006|ref|YP_343531.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC 19707] gi|76883320|gb|ABA58001.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC 19707] Length = 320 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L+P F +I+ AAY +V ++ +P F++N G + AA G+ Sbjct: 55 DVLEPGSLVPAFTDVPK--VIHLAAYGSVVESVADPTSNFAVNVHGTLNVMNAAVEAGVE 112 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 I+ ST G + P+DE S P++ YG SKL GE ++ +Y V LR Sbjct: 113 RLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCGEAYCHAFAKSYHLETVCLRFGN 172 Query: 150 VYS 152 VY Sbjct: 173 VYG 175 >gi|221272682|emb|CAX18366.1| gne [Yersinia pseudotuberculosis] gi|298162001|gb|ADI59451.1| UDP-N-acetylglucosamine-4-epimerase [Yersinia pseudotuberculosis] Length = 319 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 18/168 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDID-----LLKPKDFASFFLSF-SP 51 MK +IG +G I +L+ + + D I+ + D+ D+ S + Sbjct: 1 MKIALIGGSGFIGTNLARLLIDNSVDFSILDKVKSDVYPERWVYCDVTDYDSLISTLIGH 60 Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D+IIN AA K P + + +N EGA I +AADS+ I I ++ G Sbjct: 61 DLIINLAA---EHKDNVNPISLYYQVNVEGAKNICRAADSLNIKNIVFTSSVAVYGFVEK 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSI 153 DE P N YGKSKL E+ S+ N+ V LR V+ I Sbjct: 118 DTDESGKYAPFNHYGKSKLEAEKVYDSWFNSSADKKLVTLRPTVVFGI 165 >gi|159125959|gb|EDP51075.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus A1163] Length = 304 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP+D + L + V ++ AA + D + PE A +N + +A+ + Sbjct: 46 DLEKPEDIKNL-LDEAKLVPLHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKAL 104 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWV 150 +YISTDYVF G P + + +P N YG+ K GE V T + ++LR + Sbjct: 105 LVYISTDYVFSGKEGEAPYEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPLL 164 Query: 151 YSIFGSN 157 Y +N Sbjct: 165 YGTAQNN 171 >gi|158316959|ref|YP_001509467.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] gi|158112364|gb|ABW14561.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] Length = 345 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 34/243 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---IRVGRPD-----------IDLLKPKDFASFF 46 M+ LV+G +G + L V+D ++ +R P +D+ + F Sbjct: 1 MRVLVLGGDGMLGGELVRRLVRDHDVTATVRATAPSCPPPADRVLSGVDVRRRDTMVDAF 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + PD ++N + +AE E+ A +NA +A+ + G +++STD VF Sbjct: 61 AAVRPDAVVNAVSLVG-RRAEGRAELSAIEVNALFPHRLARLCQAAGARLVHVSTDCVFS 119 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAG---EEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 G +E P +P++++G +KL G E + + V L S FL + Sbjct: 120 GRLGDYHEEDVP-DPVDVHGMTKLLGEVTEPGTLTLRTSVVGLEAVPAASGLVEGFLAAK 178 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + RR + SAL A + L+ + D L GI+H+ ++ P+S Sbjct: 179 GEIPASRRVVH----------SALTTAEFARFVHLVLVGHPD--LTGIWHLASE--PISR 224 Query: 223 ADF 225 D Sbjct: 225 FDL 227 >gi|147679101|ref|YP_001213316.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146275198|dbj|BAF60947.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 314 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 20/172 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GR-----PDIDLLK----PKDFASF 45 MK LV G G I + + ++ V GR P ++ + ++F Sbjct: 1 MKILVTGGAGFIGSHIVDLLAGSGHVVSVADDLSTGRFENINPAVNFYRVSVASEEFGEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PD +++ AA V + +P N +G+ + +A G+ +Y S+ V+ Sbjct: 61 VARERPDAVVHQAAQVDVQHSLRDPLADAETNIQGSINLLEACRRFGVGKVVYASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+DE P P + YG SKLA E Y+ Y +LR A VY Sbjct: 121 GNPLSLPVDEEHPLVPRSPYGASKLAAEHYFRVYSEVYGVRYTVLRYANVYG 172 >gi|226354957|ref|YP_002784697.1| UDP-glucose 4-epimerase [Deinococcus deserti VCD115] gi|226316947|gb|ACO44943.1| putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Deinococcus deserti VCD115] Length = 330 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 31/172 (18%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKP 39 MK LV+G G Q+ +S + V +DV +++ DLL Sbjct: 1 MKLLVVGGAGYIGSHTVRQLRRSGHEVVVLDNLSSGHREALPEDVTLVQQ-----DLLDA 55 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYI 98 + + + PD +I+ AA V ++ P + N G+ + +A ++ IP ++ Sbjct: 56 EGVKATLQAHEPDAVIHFAALIEVGESMRAPARYYRNNVVGSLNLLQAIVETRKIPLVFS 115 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILR 146 ST V+ PI E +P P ++YG++KL E + ++ YVILR Sbjct: 116 STAAVYGTTDAVPIPENAPMQPESVYGETKLMTERMIHAFHTAHGLPYVILR 167 >gi|304408089|ref|ZP_07389739.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] gi|304343108|gb|EFM08952.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] Length = 276 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 17/202 (8%) Query: 1 MKCLVIGNNGQIA-------QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--- 50 MK LVIG NG Q+ S++ V R P L D+ S Sbjct: 1 MKLLVIGGNGMAGHMIVRYFQNRSNLQVA-YTTRRADDPSGIWLDAADYEQVEAVISRER 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI+N A + AE P AF +N + AD+IG I+IS+D VF G R Sbjct: 60 PDVIVN-AVGILNEAAERAPLAAFQVNGWLPHWLRHTADTIGARVIHISSDCVFSG-DRG 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E+ ++Y ++K GE S ++ +RT+ + + + + K++ Sbjct: 118 SYTEYDAPEGTSMYARTKALGE----SNEMRHLTIRTSIIGPDPKAEGIGLLQWFLKQQG 173 Query: 171 EISVVCDQFGTPTSALQIARAI 192 E+ + + L++A+AI Sbjct: 174 EVRGYASVYWNGVTTLELAKAI 195 >gi|315646705|ref|ZP_07899821.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] gi|315277911|gb|EFU41234.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] Length = 305 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 20/172 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP---------DIDLLKPKDFASF 45 MK +V G G I L + V ++ + G P + + + ++ Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQGYEVHVIDNLTTGDPGRLHSEAILHVADVNSQQTTAY 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PDV+ + AA V ++ EP + N G I +A G+ ++ ST V+ Sbjct: 61 ISVLKPDVVFHLAAQADVQRSIKEPPLDADANIMGTINILEACRKAGVRKIVFASTSGVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 L + + E P +P++ Y +SK+ GE+ + Y Y ILR VY Sbjct: 121 GDLEKPQLTEDDPVSPISFYAQSKITGEQYIRLYHQFFGLKYTILRFGNVYG 172 >gi|86609640|ref|YP_478402.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558182|gb|ABD03139.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 334 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYT 61 C + +G + + ++ +R G +I DL + + P+ +I+ AAY Sbjct: 17 CKALAASGHLPITYDNLVYGHPWAVRWGPLEIGDLADRQRLDQVIQHYRPEGVIHFAAYA 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 V ++ +P + N G+ ++ +A GIP I S+ G+ R PI E P P Sbjct: 77 YVGESVKDPGKYYRNNVAGSLSLLEAMRDHGIPYIVFSSTCATYGVPERIPIPESHPQRP 136 Query: 121 LNIYGKSKLAGEE 133 +N YG+SKL E+ Sbjct: 137 INPYGQSKLMVEQ 149 >gi|290956683|ref|YP_003487865.1| polysaccharide biosynthesis protein [Streptomyces scabiei 87.22] gi|260646209|emb|CBG69303.1| putative polysaccharide biosynthesis protein [Streptomyces scabiei 87.22] Length = 231 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 +++ AEG +A AA G I +S+D VF G S P DE +P+ YG +K A E Sbjct: 23 WAVTAEGPVRLAIAAAKAGSRMIQVSSDAVFSGKSHAPYDEQCRPDPITPYGAAK-AAAE 81 Query: 134 KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 V + V+ RT+ + S ++ LA RE + D F P A Sbjct: 82 TVLLLHPDAVVARTSLIIGDGQSEHERTVHELATGTREGVLFTDDFRCPVHA 133 >gi|182412672|ref|YP_001817738.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] gi|177839886|gb|ACB74138.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] Length = 314 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 +P+VI+N AA + E + + ++N +A+ A +G ++IS++ VFDG Sbjct: 63 TPEVIVNAAAISEPAVCELDGVRSEAMNVALPALLARLAVRLGARFLHISSEQVFDGERS 122 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVY--SIFGSNFLLSMLRLA 166 P P P+N YG+ KLA E V + I+R + S G L L LA Sbjct: 123 EPYSITDPPRPINRYGRQKLASEHAVREIAGASAAIVRAPLLMGDSAGGKRALHERL-LA 181 Query: 167 --KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 R + D+ P +A +AR ++++A + L G+FH Sbjct: 182 DWAAGRTARLYIDELRQPCTAENLARVLLELA------ARAELTGVFH 223 >gi|116327931|ref|YP_797651.1| sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330813|ref|YP_800531.1| sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|4234786|gb|AAD12954.1| unknown [Leptospira borgpetersenii] gi|116120675|gb|ABJ78718.1| Sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124502|gb|ABJ75773.1| Sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 298 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 12/197 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L + F + PD+++N K +P IN+ ++ IG Sbjct: 56 NMDVLNEDELLRLFSNIKPDIVVNCVGIIKQQKLSKDPITVLPINSLLPHRLSNLCKLIG 115 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I ISTD VF+G + +P + ++YG+SK GE + S+ +RT+ + Sbjct: 116 ARLILISTDCVFNGQKGNYTETDTP-DAEDLYGRSKEIGEIREESHV---FTVRTSIIGH 171 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 SN+ L L+ + E+ F + + +IA I + +I N L G++H Sbjct: 172 ELNSNYSLVDWFLS-QNGEVKGYKKAFFSGLPSCEIAEIIKTV---IIPNP--KLYGLYH 225 Query: 213 MTADGGPVSWADFAEYI 229 +++D P+S D + Sbjct: 226 VSSD--PISKFDLLSLV 240 >gi|296268654|ref|YP_003651286.1| UDP-glucose 4-epimerase [Thermobispora bispora DSM 43833] gi|296091441|gb|ADG87393.1| UDP-glucose 4-epimerase [Thermobispora bispora DSM 43833] Length = 319 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 35/226 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---RVGRPDIDLLKPKDF-------ASFFL 47 M+ LV G G I +++ V+ DV ++ G D + + F A L Sbjct: 1 MRLLVTGGAGYIGSVVAAQLVEEGHDVTVLDDLSTGHADA-VPEGARFVRGSITDAGGLL 59 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + D +++ AA + V ++ + P ++ N G A+ +A + G+P ++ ST V+ Sbjct: 60 AEGFDAVLHFAAKSLVGESVERPGEYWACNLGGTLALLEAMRAAGVPRIVFSSTAAVYGE 119 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG------- 155 R PI+E PT P + YG SKLA + + ++ Y V LR V +G Sbjct: 120 PERVPIEETDPTRPASPYGASKLAVDTALTAFAGLYGLAAVSLRYFNVAGAYGRFCERHA 179 Query: 156 --SNFLLSMLRLA-KERREISVVCDQFGT--PTSALQIARAIIQIA 196 ++ + ++L++A ER +S+ FGT PT R + +A Sbjct: 180 VETHLIPNVLKVALGERESVSL----FGTDYPTEDGTCVRDYLHVA 221 >gi|291393148|ref|XP_002713048.1| PREDICTED: TDP-glucose 4,6-dehydratase [Oryctolagus cuniculus] Length = 355 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEAGVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVY 197 >gi|153261|gb|AAA26747.1| UDP galactose 4-epimerase (EC 1.7.7.12) [Streptomyces lividans] Length = 319 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 17/151 (11%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 LSF D +++ AA++ V ++ +PE + N G A+ +A G+ ++ ST + Sbjct: 63 LSF--DGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVRRLVFSSTAATYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-------LRTAWVYSIFG--- 155 + PI E +PT P N YG SKLA + + + + A Y +G Sbjct: 121 EPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFNVAGAYGEYGERH 180 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RRE ISV D + TP Sbjct: 181 DPESHLIPLVLQVAQGRREAISVYGDDYPTP 211 >gi|301766530|ref|XP_002918693.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Ailuropoda melanoleuca] Length = 356 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEAGVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVY 197 >gi|110666554|gb|ABG81793.1| QnlA [Escherichia coli] gi|110666571|gb|ABG81809.1| QnlA [Escherichia coli] Length = 289 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 35/248 (14%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRP-----------------DIDLLKPKDF 42 K L++G NG + SL + D E++ R ++D++ K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGDYEVLGTTRSMVVAKQLEQKHNVKIIDNVDVIDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + + P+++ N A ++ IN+ +A+ + I+ STD Sbjct: 64 ETVVVEHKPNIVFNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHSAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G +++ ++ +++YGKSK GE + N ++ LRT+ + GSN L Sbjct: 124 IFKGTKGNYVED-DESDAIDLYGKSKFLGEVEY----NGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L++++ F G PT + ++ H + +L G+FH++ + P+S Sbjct: 179 WFLSQKKSVKGFTNAIFSGLPTCYMA------EVIHKYV--LPNNLAGLFHLSVE--PIS 228 Query: 222 WADFAEYI 229 D I Sbjct: 229 KYDLLNII 236 >gi|300313483|ref|YP_003777575.1| NAD_dependent epimerase/dehydratase [Herbaspirillum seropedicae SmR1] gi|300076268|gb|ADJ65667.1| NAD_dependent epimerase/dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 5/93 (5%) Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 + + P AF +N G + +A + G+ +Y S+ V+ R P+DE P N N Sbjct: 91 QCHEYPRSAFDVNVRGTFNVMEACVAKGVKRLVYSSSASVYGDAVREPMDEDHPYNNKNF 150 Query: 124 YGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 YG +K+AGE + S+ + NYV LR VY Sbjct: 151 YGATKIAGETMLRSFHHRYGLNYVGLRYMNVYG 183 >gi|225707656|gb|ACO09674.1| dTDP-D-glucose 4,6-dehydratase [Osmerus mordax] Length = 341 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 D+ P+ F + + D++ + AA T V+ + P +N EG + K A D+ Sbjct: 63 DICNPRLVNHIFATENIDIVFHLAAKTHVESSFVCPSTYHRVNVEGTRVLLKGAFDAKVA 122 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +YISTD V+ +E SP P N Y +K A E V SY Y ++ R+ Sbjct: 123 KFVYISTDEVYGQSLDKAFEETSPRRPTNPYSNTKAAAECLVLSYWEKYRFPVIVTRSNN 182 Query: 150 VY 151 VY Sbjct: 183 VY 184 >gi|114769690|ref|ZP_01447300.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] gi|114549395|gb|EAU52277.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] Length = 337 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ F +F PD +I+ A AV ++ P + + +N G+ ++ A G Sbjct: 58 DIRDANALDKIFNTFKPDSVIHFAGLKAVGESVANPLMYYDVNVGGSVSLLTAMSKAGCN 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ P DE PTNP+N YG++KL E + +T Sbjct: 118 KIVFSSSATVYGKPQYLPYDEEHPTNPVNPYGRTKLIIENIINDWT 163 >gi|15828065|ref|NP_302328.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae TN] gi|221230542|ref|YP_002503958.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae Br4923] gi|13093619|emb|CAC30919.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae] gi|219933649|emb|CAR72061.1| dTDP-glucose 4,6-dehydratase [Mycobacterium leprae Br4923] Length = 333 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F L DV+++ AA T VD A D+PE N G I +A + +ISTD V+ Sbjct: 67 FRLVAESDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAVRHHSVRLHHISTDEVY 126 Query: 105 DGLSR---TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 L T E +P NP + Y +K AG+ V ++ +Y + T Sbjct: 127 GDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYGVRAT 172 >gi|254433464|ref|ZP_05046972.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani AFC27] gi|207089797|gb|EDZ67068.1| NAD dependent epimerase/dehydratase family [Nitrosococcus oceani AFC27] Length = 296 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L+P F +I+ AAY +V ++ +P F++N G + AA G+ Sbjct: 31 DVLEPGSLVPAFTDVPK--VIHLAAYGSVVESVADPTSNFAVNVHGTLNVMNAAVEAGVE 88 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 I+ ST G + P+DE S P++ YG SKL GE ++ +Y V LR Sbjct: 89 RLIFASTGGALIGDATPPVDERSLPKPISPYGASKLCGEAYCHAFAKSYHLETVCLRFGN 148 Query: 150 VY 151 VY Sbjct: 149 VY 150 >gi|322421638|ref|YP_004200861.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] gi|320128025|gb|ADW15585.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] Length = 332 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 20/217 (9%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E +RV D+ + A +L D + N A T+ + + P INA+ +I Sbjct: 55 ERVRVNISDVR----DEHAMKYLVQGQDFLFNLAGQTSHVDSMNNPYTDLEINAKSQLSI 110 Query: 85 AKAAD--SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +A + G+ ++ ST ++ P+DE P +P+++ G +K+AGE Y N Y Sbjct: 111 LEACRRYNAGLKLVFASTRQMYGAPQYLPVDERHPLHPVDVNGINKMAGEWYHLVYNNVY 170 Query: 143 VILRTAW-VYSIFG---------SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI 192 I T + + +G FL +RL E +E+ V D G + Sbjct: 171 GIRSTVLRLTNTYGPRMRVKDARQTFLGIWIRLLVEGKELQVFGD--GKQIRDFSYVDDV 228 Query: 193 IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++ A L S+ + IF++ AD P++ D AE + Sbjct: 229 VE-AMLLCAASEDANGEIFNLGAD-DPINLKDTAELL 263 >gi|4539118|emb|CAB39839.1| putative dTDP-(glucose or rhamnose)-4,6-dehydratase [Mycobacterium leprae] Length = 331 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F L DV+++ AA T VD A D+PE N G I +A + +ISTD V+ Sbjct: 65 FRLVAESDVVVHFAAETHVDNALDDPEPFLRTNVIGTFTILEAVRHHSVRLHHISTDEVY 124 Query: 105 DGLSR---TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 L T E +P NP + Y +K AG+ V ++ +Y + T Sbjct: 125 GDLELDEPTRFTESTPYNPSSPYSATKAAGDMLVRAWVRSYGVRAT 170 >gi|298161984|gb|ADI59435.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis] Length = 319 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 18/168 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDID-----LLKPKDFASFFLSF-SP 51 MK +IG +G I +L+ + + D I+ + D+ D+ S + Sbjct: 1 MKVALIGGSGFIGTNLARLLIDNSVDFSILDKVKSDVYPESWVYCDVTDYDSLISTLIDH 60 Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D+IIN AA K P + + +N EGA I +AADS+ I I ++ G Sbjct: 61 DLIINLAA---EHKDNVNPISLYYQVNVEGAKNICRAADSLKIKNIIFTSSVAVYGFVEK 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSI 153 DE P N YGKSKL E+ S+ N+ V LR V+ I Sbjct: 118 DTDESGKYAPFNHYGKSKLEAEKVYDSWFNSSADKKLVTLRPTVVFGI 165 >gi|16124347|ref|NP_418911.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|221233029|ref|YP_002515465.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] gi|13421195|gb|AAK22079.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|220962201|gb|ACL93557.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] Length = 327 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 2/115 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F +++P +++ AA V ++ P F N G + +AA G+ Sbjct: 51 DIRDAARLDAVFAAYAPVAVLHFAARIEVGESVKNPGAFFDTNVGGTITLIEAARRAGVK 110 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 + + ST F P+ E P PLN YG+SKL E+ +A Y + YV L++A Sbjct: 111 VVVFSSTCATFGDPVDLPMKETHPQAPLNPYGRSKLMVEQALADY-DRYVGLKSA 164 >gi|307265779|ref|ZP_07547330.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919174|gb|EFN49397.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] Length = 311 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 20/173 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK LV G G I + + +++ V+ + G+ + D Sbjct: 1 MKVLVAGGAGFIGSHIGDLLIENGYEIVIVDNLSTGKEKFINKKAIFYKKDITDDDLYEI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F PD +I+ AA V K+ D +N G I + G+ IY S+ V+ Sbjct: 61 FRKEKPDYVIHQAAQIDVQKSIDNSVFDAKVNVLGTVNILECCRKSGVKKIIYASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 PIDE NP++ YG SK E Y+ Y ILR A VY I Sbjct: 121 GNPEYLPIDEGHKINPISSYGISKHTAEHYFEVYSQLYDLKYTILRYANVYGI 173 >gi|281492582|ref|YP_003354562.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis KF147] gi|281376246|gb|ADA65737.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis KF147] Length = 330 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 AS F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 62 LASVFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSST 121 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F ++PI E +P NP+N YG+SKL E+ + + YV LR Sbjct: 122 AATFGIPEKSPISEKTPQNPINPYGESKLIMEKMMKWQSQATDMTYVALR 171 >gi|218135292|ref|ZP_03464096.1| hypothetical protein BACPEC_03197 [Bacteroides pectinophilus ATCC 43243] gi|217990677|gb|EEC56688.1| hypothetical protein BACPEC_03197 [Bacteroides pectinophilus ATCC 43243] Length = 290 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS------------ 48 MK L+ G NG I ++L+ ++ +II +GR +I +++ S ++ Sbjct: 1 MKILITGCNGFIGKNLTDAFKKEHDIIGLGRAEISRADVREYISCDIADRQRLSECIQKY 60 Query: 49 -FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDG 106 S D++I+ AA + D+ E ++ N G IA A + G+ C +YIS+ V Sbjct: 61 NGSIDIVIHAAA-----EISDDVEKLYNTNCLGTQNIADFAKTAGVSCFVYISSVPVIGI 115 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 PI E P P +Y +K GE+ V Sbjct: 116 PQYVPITEKHPVKPATVYHYTKYFGEQIV 144 >gi|89098346|ref|ZP_01171230.1| putative LPS biosynthesis related reductase [Bacillus sp. NRRL B-14911] gi|89086895|gb|EAR66012.1| putative LPS biosynthesis related reductase [Bacillus sp. NRRL B-14911] Length = 275 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD+IIN AE+ P++AF +N IA+ A+ G I+ISTD VF G + Sbjct: 60 PDIIINCIGLLNGQAAEN-PKLAFQLNGLLPHQIARFAERYGGRLIHISTDCVFSGGIGS 118 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 +E +P + +IY +SK GE + ++ +RT+ + + + L K++ Sbjct: 119 YKEEDTP-DGTSIYAQSKQLGE----IVDSRHLTVRTSIIGPELKDDGIGLFLWFMKQQG 173 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 I+ + + L++A+A+ +IE T L G+ H+ + Sbjct: 174 RINGYTEALWNGVTTLELAKAV----RGMIE---TELSGLCHLGGE 212 >gi|297205241|ref|ZP_06922637.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] gi|297149819|gb|EFH30116.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] Length = 336 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + ++ D +I+ AAY V ++ EP + N G ++ KA + G+ Sbjct: 58 DVLDTNLVTNILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVK 117 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + S+ G+ + PI E +PTNP+N YG++KL EK+ +T+ Sbjct: 118 NLVFSSSAATYGVPKDLPIKETAPTNPINPYGETKLM-MEKIMRWTD 163 >gi|3047109|gb|AAC13620.1| F6N23.17 gene product [Arabidopsis thaliana] gi|7267395|emb|CAB80865.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis thaliana] Length = 267 Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIF 180 >gi|42572791|ref|NP_974492.1| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] gi|124301070|gb|ABN04787.1| At4g00560 [Arabidopsis thaliana] gi|332656500|gb|AEE81900.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 253 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIF 180 >gi|239930771|ref|ZP_04687724.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] gi|291439137|ref|ZP_06578527.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] gi|291342032|gb|EFE68988.1| UDP-glucose 4-epimerase [Streptomyces ghanaensis ATCC 14672] Length = 330 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 18/181 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A + G+ ++ ST Sbjct: 57 AAEWLDPSYDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLAAMRAAGVRRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 + + PI E +PT P N YG SKLA + + A++ V LR V +G Sbjct: 117 ATYGEPEQVPITESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSLRYFNVAGAYGQH 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S+ + +L++A+ RRE ISV D + TP R I +A +L E +L Sbjct: 177 GERHDPESHLIPLVLQVAQGRREAISVYGDDYPTPDGT--CVRDYIHVA-DLAEAHLLAL 233 Query: 208 R 208 R Sbjct: 234 R 234 >gi|329941190|ref|ZP_08290469.1| UDP-glucose 4-epimerase [Streptomyces griseoaurantiacus M045] gi|329299721|gb|EGG43620.1| UDP-glucose 4-epimerase [Streptomyces griseoaurantiacus M045] Length = 326 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 20/160 (12%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 57 AAKWLDASFDAVLHFAAFSQVGESVVKPEKYWENNVGGTMALLAAMRETGVRTLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVY--- 151 + + PI E +PT P N YG SKLA + + A++ V LR A Y Sbjct: 117 ATYGEPEQVPIVETAPTKPTNPYGASKLAVDHMISGEAAAHGLGAVSLRYFNVAGAYATS 176 Query: 152 --SIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 + +G S+ + +L++A+ RRE ISV D + TP Sbjct: 177 SGATYGERHDPESHLIPLVLQVAQGRREAISVFGDDYPTP 216 >gi|302389143|ref|YP_003824964.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] gi|302199771|gb|ADL07341.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] Length = 323 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+L + F PD +++ AA V ++ +P + + N GA + KA G+ Sbjct: 51 DILDHEALERAMDEFRPDAVMHFAAKIVVPESVQKPLLYYENNTCGALNLLKAMRRCGVN 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 I+ ST V+ +R PI E P NP+N YG+SK A E Sbjct: 111 KLIFSSTAAVYGEPARMPITEDFPLNPVNPYGRSKAAVE 149 >gi|91782062|ref|YP_557268.1| putative epimerase/dehydratase [Burkholderia xenovorans LB400] gi|91686016|gb|ABE29216.1| Putative epimerase/dehydratase [Burkholderia xenovorans LB400] Length = 318 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIP-CIYIS 99 A++ + D +++ AA V + E +P+ AF + N +GA +A+AA G+ +++S Sbjct: 57 ATWPAALQVDCVVHLAARVHVMREESADPDAAFRATNVDGALRVAQAARRHGVRRFVFVS 116 Query: 100 T-DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS-I 153 + + +G S P+ E P P + YG+SKLA E+ + SY + VI+R VY Sbjct: 117 SVKALAEGDSGRPVCEDDPPMPQDAYGRSKLAAEQALCSYGEESGLDVVIVRPPLVYGPQ 176 Query: 154 FGSNFLLSM 162 +NFL M Sbjct: 177 VRANFLRLM 185 >gi|239905942|ref|YP_002952681.1| UDP-glucose 4-epimerase [Desulfovibrio magneticus RS-1] gi|239795806|dbj|BAH74795.1| UDP-glucose 4-epimerase [Desulfovibrio magneticus RS-1] Length = 337 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + F F P +++ AA+ V ++ +PE + N G+ ++ A G Sbjct: 52 DILNRGELDEVFAEFKPVAVLHFAAFAYVGESVTDPEKYYRNNVAGSLSLLSAMRKAGCR 111 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I + ST + R P+ E PT P++ YG SKL E+ + + Y + TA Y Sbjct: 112 HIVFSSTCATYGAPERVPLTEDHPTRPMSPYGTSKLMIEQMLKDFDAAYGMTYTALRY 169 >gi|115380488|ref|ZP_01467463.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld, putative [Stigmatella aurantiaca DW4/3-1] gi|310818102|ref|YP_003950460.1| DTDP-6-deoxy-l-lyxo-4-hexulose reductase [Stigmatella aurantiaca DW4/3-1] gi|115362503|gb|EAU61763.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld, putative [Stigmatella aurantiaca DW4/3-1] gi|309391174|gb|ADO68633.1| Dtdp-6-deoxy-l-lyxo-4-hexulose reductase [Stigmatella aurantiaca DW4/3-1] Length = 260 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 4/150 (2%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G +G I L + + Q +++ R + + F +PDV+ + A Sbjct: 1 MKAIVTGASGTIGSKLCAHLRCQGHDVVPWDRRQVPVNDYGAMERFVREVAPDVVFHLGA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + + DE + N A +A ++G+ ++ ST VF +R P S + Sbjct: 61 ISQPSEWSDE---GWGSNYAWASELAWLTRTLGVRFLFSSTSMVFSNSARGPFTRSSQPD 117 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 YG +K EE+V S ++R W Sbjct: 118 ASEGYGYAKRLAEERVLSQNPEARVVRLGW 147 >gi|154504016|ref|ZP_02041076.1| hypothetical protein RUMGNA_01842 [Ruminococcus gnavus ATCC 29149] gi|153795443|gb|EDN77863.1| hypothetical protein RUMGNA_01842 [Ruminococcus gnavus ATCC 29149] Length = 688 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 23/219 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G I +S+ ++D + V D+ + + KDF+ + DVI + A Sbjct: 396 KILITGKGSYIGESVEQWLLKDRDQYEVDTLDMLNNSWRDKDFSEY------DVIFHVAG 449 Query: 60 YTAVDKA---EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEF 115 D E++ E+ + +N E +A+ A + I++S+ V+ G I Sbjct: 450 IAHADVGAITEEQKELYYKVNTELTLEVAEKAKRSNVKQFIFMSSMIVYSGCKERIITSS 509 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + PLN YG SKL ++K+ + V+LR +Y + +LA Sbjct: 510 TEPKPLNFYGDSKLQADKKLQEMVTDGFKVVVLRPPMIYGKGSKGNYPQLAKLASRLPVF 569 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 +V +Q S L I + Q +I+N +T G+F Sbjct: 570 PIVKNQ----RSMLHIDN-LCQFVKLMIDNEET---GVF 600 >gi|29830118|ref|NP_824752.1| UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] gi|29607228|dbj|BAC71287.1| putative UDP-glucose 4-epimerase [Streptomyces avermitilis MA-4680] Length = 319 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 57 AAKWLDSSFDAVLHFAAFSQVGESVVKPEKYWDNNVGGTLALLAAMREAGVRKLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + PI E +PT P N YG SKLA + + + V LR V +G Sbjct: 117 ATYGEPEEVPIVETAPTRPTNPYGASKLAVDHMITGEAGAHGLAAVSLRYFNVAGAYGSC 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RR+ ISV D + TP Sbjct: 177 GERHDPESHLIPLVLQVAQGRRDAISVYGDDYPTP 211 >gi|222081305|ref|YP_002540668.1| UDP-glucose 4-epimerase [Agrobacterium radiobacter K84] gi|221725984|gb|ACM29073.1| UDP-glucose 4-epimerase [Agrobacterium radiobacter K84] Length = 328 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + +SPD +I+ AA V ++ ++P ++ N G ++ +A G Sbjct: 53 DILDTQRLVEVLTKYSPDAVIHFAASAYVGESVEDPAKYYANNVNGTHSLLEACRRSGTD 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ PI E P+N YG++KL E +A Y+ Y + A Y Sbjct: 113 KLIFSSSCAIYGIPDHLPIREHQIPQPINPYGRTKLIAEHMLADYSAAYGLHYAALRY 170 >gi|241202962|ref|YP_002974058.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856852|gb|ACS54519.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 328 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++PD +I+ AA V ++ + P ++ N GA ++ A G+ Sbjct: 53 DVLDTSCLIEVIEKYAPDAVIHFAASAYVGESVENPAKYYNNNVCGALSLIDACRQTGLQ 112 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I+ S+ V+ S PIDE P P+N YGK+KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCAVYGVPSVLPIDETLPKAPINPYGKTKLIFEHMLADYAAAYGLRYVALRY 170 >gi|86740269|ref|YP_480669.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86567131|gb|ABD10940.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 346 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 119/294 (40%), Gaps = 68/294 (23%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ LV G++G I L + + R D+ L F+ L PD + Sbjct: 1 MRILVTGHDGYIGTRL-------IPLFRAAGHDVVGLDSGLFSGCTLGPDPDFVPALKLD 53 Query: 55 ---INPA---AYTAV--------DKAED-EPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 + P+ Y AV D D P + + INA G + +AA + G+P ++ Sbjct: 54 IRDVRPSQLEGYDAVVHLAGISNDPLGDLNPAVTYDINARGTLLVGRAAKAAGVPRFVFS 113 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSI-- 153 S+ ++ PIDE + +P+ YG+SK+ E ++A ++ V LR A Y + Sbjct: 114 SSCSLYGAHGDAPIDESAEFHPVTPYGESKVIAERELAELADDDFSPVFLRNATAYGVSP 173 Query: 154 --FGSNFLLSMLRLAKERREISVVCDQFGTPTSAL----QIARAIIQI-----------A 196 G + ++ A E+ + D GTP L IARA++ + A Sbjct: 174 RLRGDLVVNNLTGYAVTTGEVYLKSD--GTPWRPLVHIEDIARAMLAVCEAPREKIHLKA 231 Query: 197 HNLIENSDT----SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI 246 +N+ +++ + I GG V +AD A GP + YR+ Sbjct: 232 YNVGRSAENYRIRDVAAIVEEVVPGGRVVFADTA-----------GPDKRNYRV 274 >gi|298243724|ref|ZP_06967531.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] gi|297556778|gb|EFH90642.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] Length = 291 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 20/143 (13%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 IYIS+D +FDG + E P +P YG++ EE+V + NY I+R +++Y + Sbjct: 103 IYISSDGIFDG-RQGAYTESDPPHPTTPYGQNLHFFEERVREFCENYCIIRPSYLYG-YS 160 Query: 156 SNFLLSMLRLAKE----RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 L LR +E D +P Q A+AI+Q+A ++ GI Sbjct: 161 LGELDRRLRRVREGLLQGEHFEYFDDMLKSPLDVNQAAQAIVQLAL-------SNFVGIV 213 Query: 212 HMTADGGPVSWADFAEYIFWESA 234 H+ G P+S Y F+++A Sbjct: 214 HVA--GKPMSV-----YHFYQAA 229 >gi|320547759|ref|ZP_08042043.1| UDP-glucose 4-epimerase [Streptococcus equinus ATCC 9812] gi|320447519|gb|EFW88278.1| UDP-glucose 4-epimerase [Streptococcus equinus ATCC 9812] Length = 332 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 36/221 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + ++ V+ + G PD L +DF Sbjct: 1 MSILVLGGAGYIGSHMVDRLIEKGEEKVVVVDSLVTGHRAAVHPDAKFYQGDLADQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFTENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMIKLLEVMNEFGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-L 160 G+ PI E +P P+N YG+SKL E I+R W +G F+ L Sbjct: 121 ATYGIPDELPIKETTPQRPINPYGESKLMME----------TIMR--WADQAYGIKFVPL 168 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +A + + S+ D G T L I I+Q+A + E Sbjct: 169 RYFNVAGAKPDGSIGEDH-GPETHLLPI---ILQVAQGVRE 205 >gi|256851634|ref|ZP_05557022.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260661649|ref|ZP_05862561.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|282933283|ref|ZP_06338669.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|256615592|gb|EEU20781.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260547706|gb|EEX23684.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|281302579|gb|EFA94795.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + ++ D +I+ AAY V ++ EP + N G ++ KA + G+ Sbjct: 51 DVLDTNLVTNILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVK 110 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + S+ G+ + PI E +PTNP+N YG++KL EK+ +T+ Sbjct: 111 NLVFSSSAATYGVPKDLPIKETAPTNPINPYGETKLM-MEKIMRWTD 156 >gi|126337543|ref|XP_001377580.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 432 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ +P F + + D++++ AA T VD + +N G + AA + Sbjct: 157 DICEPHFIKLLFETENIDIVLHFAAQTHVDLSFVHALEFTYVNVYGTHVLVSAAYEARVE 216 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 IY+STD V+ G DE SP P N Y SK A E V SY Y VI R++ Sbjct: 217 KFIYVSTDEVYGGSLDEEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSN 276 Query: 150 VY 151 VY Sbjct: 277 VY 278 >gi|74139194|dbj|BAE38483.1| unnamed protein product [Mus musculus] Length = 311 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 49 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 108 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 109 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 153 >gi|47198261|emb|CAF87828.1| unnamed protein product [Tetraodon nigroviridis] Length = 253 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 3/119 (2%) Query: 32 PDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAA 88 P D+ P+ F S D + + AA T V+ + P +N EG + A+ A Sbjct: 47 PQGDVCNPRLVNHIFHSERIDAVFHLAAQTHVESSFRCPSSFQRVNVEGTRVLLEAARGA 106 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +Y+STD V+ + DE SP P N Y +K A E V SY + Y + +T Sbjct: 107 RHRPRRFVYVSTDEVYGPSADQVFDESSPLRPSNPYSATKAAAEFLVTSYRDAYQVGQT 165 >gi|323484534|ref|ZP_08089899.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] gi|323402112|gb|EGA94445.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] Length = 346 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + D S F PD+++N AA + VD++ +EPE+ N +G + A G+ Sbjct: 65 VDICERNDVYSVFQKEQPDMVVNFAAESHVDRSIEEPEVFLDTNIKGTAVLMDACRKFGM 124 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + V +Y Y Sbjct: 125 VRYHQVSTDEVYGDLPLNRPDLFFTESTPIHTSSPYSASKAGADLLVQAYHRTY 178 >gi|148668234|gb|EDL00564.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Mus musculus] Length = 356 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|306832690|ref|ZP_07465827.1| UDP-glucose 4-epimerase [Streptococcus bovis ATCC 700338] gi|304425146|gb|EFM28275.1| UDP-glucose 4-epimerase [Streptococcus bovis ATCC 700338] Length = 332 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 36/221 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG----------RPDIDL----LKPKDFAS 44 M LV+G G I + V+ D E++ V PD L +DF Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEKGDEEVVVVDSLVTGHRAAVHPDAIFYQGDLADQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + +PD+ +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFTENPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNEFGVKHIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-L 160 G+ PI E +P P+N YG+SKL E I++ W +G F+ L Sbjct: 121 ATYGIPDEIPIKETTPQRPINPYGESKLMME----------TIMK--WSDQAYGIKFVPL 168 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +A + + S+ D G T L I I+Q+A + E Sbjct: 169 RYFNVAGAKPDGSIGEDH-GPETHLLPI---ILQVAQGVRE 205 >gi|161525675|ref|YP_001580687.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189349599|ref|YP_001945227.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] gi|160343104|gb|ABX16190.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC 17616] gi|189333621|dbj|BAG42691.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616] Length = 321 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 9/134 (6%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAED-EPEIAFSI-NAEGAGAIAKAADSIGIPCIYI-- 98 A++ PD +I+ AA V + E +P++AF + N G +A+AA G+ I Sbjct: 57 AAWPTDLGPDCVIHLAARVHVMRDESPDPDVAFDVTNVAGTLRLAEAARKHGVRRIVFAS 116 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI- 153 S V +G P+ E + +P + YG+SKL E ++A + + VI+R VY Sbjct: 117 SIKAVGEGDGGMPLSERASPDPRDAYGRSKLRAERELAWFGTANGLDVVIVRPPLVYGPG 176 Query: 154 FGSNFLLSMLRLAK 167 +NFL M +A+ Sbjct: 177 VRANFLRMMDTVAR 190 >gi|10334815|gb|AAG16750.1|AF277002_2 UDP-galactose 4-epimerase GalE [Rhodococcus equi] Length = 283 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ + PE + N A+ +A G P ++ ST + RT Sbjct: 70 DGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTPRLVFSSTAATYGEPERT 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +PT P N YG +KLA + + SY N + + T+ Y Sbjct: 130 PITEDAPTRPTNPYGATKLAIDHAITSYANAHSLAATSLRY 170 >gi|42523194|ref|NP_968574.1| UDP-N-acetyl-D-quinovosamine 4-epimerase [Bdellovibrio bacteriovorus HD100] gi|39575399|emb|CAE79567.1| UDP-N-acetyl-D-quinovosamine 4-epimerase [Bdellovibrio bacteriovorus HD100] Length = 289 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 25/191 (13%) Query: 52 DVIINPAAYTAVDKAEDEPEIA-FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG--- 106 D I++ AA V + + PE F+IN E +A A G+ IYIST +VF Sbjct: 46 DCILHCAAL--VHQMQGAPEEQYFTINYELTKKLADTAKRAGVHHFIYISTAHVFGDSGD 103 Query: 107 --LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYSIFGSNFLLS 161 ++E SP +P + YGKSKLA EE + S ++ I+R VY +LS Sbjct: 104 LYQHDKRLNEKSPCHPHDPYGKSKLAAEEYLQSISSEAFTVSIVRPPMVYGRGAKGNILS 163 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIA---HNLIENSDTSLRGIFHMTADGG 218 +++L K+ I P + AR+I+ + H L G+F + D Sbjct: 164 LIKLVKKAPFI---------PLGYRENARSIVSVGNLCHYLSLVIKKRAAGVF-LPQDRE 213 Query: 219 PVSWADFAEYI 229 P+S E I Sbjct: 214 PISIGALVESI 224 >gi|148380637|ref|YP_001255178.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|153932582|ref|YP_001384921.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153935643|ref|YP_001388390.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|148290121|emb|CAL84240.1| putative UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|152928626|gb|ABS34126.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931557|gb|ABS37056.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] Length = 305 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + A+ F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNIANIFKKEKFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPGYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|190410050|ref|YP_001965574.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti] gi|125631080|gb|ABN47081.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti SM11] Length = 328 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L PD +I+ AA V ++ +P ++ N G ++ A G+ Sbjct: 53 DILDGNHLVEVLEYHRPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRRTGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ PI E +P +P+N YGK+KL E +A Y NYV LR Sbjct: 113 KVIFSSSCATYGVPAVLPIHETTPQDPINPYGKTKLMAEHMLADYAAAFKLNYVALR 169 >gi|12847753|dbj|BAB27693.1| unnamed protein product [Mus musculus] gi|148668236|gb|EDL00566.1| TDP-glucose 4,6-dehydratase, isoform CRA_c [Mus musculus] Length = 343 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|313201556|ref|YP_004040214.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] gi|312440872|gb|ADQ84978.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] Length = 324 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 1/111 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F+ +PD +++ A+Y V ++ P+ + N + A G+ Sbjct: 47 DLADKAALDEVFVKHAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKNGVN 106 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 I+ ST VF PIDE NPLN YG+SKL E+ + Y Y I Sbjct: 107 YFIFSSTAAVFGEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGI 157 >gi|116250330|ref|YP_766168.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115254978|emb|CAK06052.1| putative UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 328 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++PD +I+ AA V ++ + P ++ N GA ++ A G+ Sbjct: 53 DVLDTSCLIEVIEKYAPDAVIHFAASAYVGESVENPAKYYNNNVCGALSLIDACRQTGLQ 112 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I+ S+ V+ S PIDE P P+N YGK+KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCAVYGVPSVLPIDETLPKAPINPYGKTKLIFEHMLADYAAAYGLRYVALRY 170 >gi|322807009|emb|CBZ04579.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 305 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + A+ F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNIANIFKKEKFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|153941178|ref|YP_001391977.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|152937074|gb|ABS42572.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|295319993|gb|ADG00371.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. 230613] Length = 305 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + A+ F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNIANIFKKEKFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|150375822|ref|YP_001312418.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] gi|150030369|gb|ABR62485.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] Length = 328 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L PD +I+ AA V ++ +P ++ N G ++ A G+ Sbjct: 53 DILDGNHLVEVLEYHRPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRRTGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ PI E +P +P+N YGK+KL E +A Y NYV LR Sbjct: 113 KVIFSSSCATYGVPAVLPIHETTPQDPINPYGKTKLMAEHMLADYAAAFKLNYVALR 169 >gi|284992781|ref|YP_003411335.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] gi|284066026|gb|ADB76964.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] Length = 316 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAADSIGIPCI 96 D A P+ +++ AA + V +++ +PEI + N G A+ +AAD I + Sbjct: 53 HDSAPVLADVRPEAVLHFAAKSLVGESQVKPEIYWDTNVSGTLALLEAMRAADCRRI--V 110 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ST + + PI E +PT P N YG +KLA + + SY Y Sbjct: 111 FSSTAATYGEPEQVPIREDAPTRPTNTYGATKLAVDAMLTSYAAAY 156 >gi|226950090|ref|YP_002805181.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|226841170|gb|ACO83836.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 305 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + +S F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNISSIFKKERFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|330834786|ref|YP_004409514.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] gi|329566925|gb|AEB95030.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] Length = 309 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +S DVI+N AA + VD++ +P AF +N EG + I +++STD V+ + Sbjct: 62 YSIDVIVNFAAESHVDRSISDPG-AFLVNVEGVVNLLNICRKYKIKLVHVSTDEVYGEME 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +E SP NP + Y SK +G+ + +Y Y Sbjct: 121 DS--NEDSPLNPSSPYAASKASGDLFIKAYVRTY 152 >gi|238855447|ref|ZP_04645757.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|260665167|ref|ZP_05866016.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|282933045|ref|ZP_06338435.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|313472733|ref|ZP_07813221.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|238831937|gb|EEQ24264.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|239529295|gb|EEQ68296.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|260560904|gb|EEX26879.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|281302803|gb|EFA95015.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + + D +I+ AAY V ++ EP + N G ++ KA + G+ Sbjct: 51 DVLDTSLVTNILMDEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVK 110 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + S+ G+ + PI E +PTNP+N YG++KL EK+ +T+ Sbjct: 111 NLVFSSSAATYGIPKDLPIKETAPTNPINPYGETKLM-MEKIMRWTD 156 >gi|168180897|ref|ZP_02615561.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|168183253|ref|ZP_02617917.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|237796117|ref|YP_002863669.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|182668314|gb|EDT80293.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|182673690|gb|EDT85651.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|229261008|gb|ACQ52041.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 305 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + +S F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNISSIFKKERFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|220924394|ref|YP_002499696.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219949001|gb|ACL59393.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 338 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 35/207 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---------------DVEIIR-----VGRPDID----- 35 M+CLV G G I L+ + DV + R + P Sbjct: 1 MRCLVTGTAGFIGFHLARRLLAAGHAVVGVDGLTDYYDVALKRARLSALAGPGFANHSFM 60 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L +P FA+ PD++++ AA V + + PE + N G + + + Sbjct: 61 LEEPGAFAALMGEVKPDIVVHLAAQAGVRYSLENPESYVAANMVGTFQVLEGLRQHPVRH 120 Query: 95 CIYISTDYVFDGLSRTPIDEF-SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYS 152 + ST V+ G RTP E + PL IY SK+AGE +Y + + I TA+ ++ Sbjct: 121 ALMASTSSVYGGNPRTPFRETDTVATPLTIYAASKIAGEAMAHAYAHLWRIPTTAFRFFT 180 Query: 153 IFG-------SNFLLSMLRLAKERREI 172 ++G + FL + LA E E+ Sbjct: 181 VYGPWGRPDMALFLFTRKILAGEPVEV 207 >gi|30173340|sp|Q8VDR7|TGDS_MOUSE RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|18204038|gb|AAH21419.1| TDP-glucose 4,6-dehydratase [Mus musculus] Length = 355 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|323476570|gb|ADX81808.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus HVE10/4] Length = 318 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF P++I+N AA T VD++ +P+ + N G I +A +++STD V+ Sbjct: 65 SFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLYNFKYVHVSTDEVY--- 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 122 GEECADENSPLNPSSPYSASKASADLLVKSYVRTY 156 >gi|289577898|ref|YP_003476525.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] gi|289527611|gb|ADD01963.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter italicus Ab9] Length = 288 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 D PD +I+ AA V K+ D P +N G + + G+ IY S Sbjct: 26 DLCEILKKEKPDYVIHQAAQIDVQKSIDNPVFDTKVNILGTVNLLECCRKSGVKKVIYAS 85 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 + V+ PIDE NP++ YG SK E Y+ Y ILR A VY I Sbjct: 86 SAAVYGNPEYLPIDEGHRINPISSYGISKHTAEHYFEVYSQLYDLKYTILRYANVYGI 143 >gi|148668237|gb|EDL00567.1| TDP-glucose 4,6-dehydratase, isoform CRA_d [Mus musculus] Length = 357 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 95 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 154 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 155 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 199 >gi|156401579|ref|XP_001639368.1| predicted protein [Nematostella vectensis] gi|156226496|gb|EDO47305.1| predicted protein [Nematostella vectensis] Length = 317 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 3/102 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +I+ A+ E +P+ A +N +G + A G P +Y ST + + Sbjct: 76 DAVIHLASIVGYPACEKDPQKATEVNEQGTRNVVDALLP-GQPLVYASTGSCYGAIEDGL 134 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 E +P +PL +YGK+K GEE V V LR A V+ I Sbjct: 135 CTESTPISPLTLYGKTKANGEEMVLQKEG--VALRLATVFGI 174 >gi|225579052|ref|NP_083854.3| dTDP-D-glucose 4,6-dehydratase [Mus musculus] gi|74178557|dbj|BAE32527.1| unnamed protein product [Mus musculus] Length = 355 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA G+ IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|320010328|gb|ADW05178.1| UDP-glucose 4-epimerase [Streptomyces flavogriseus ATCC 33331] Length = 326 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 60 AAKWLDASYDGVLHFAAFSQVGESVVDPEKYWVNNVGGTTALLAAMRDAGVRTLVFSSTA 119 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + +PI E PT P N YG SKLA + ++ N + V LR V +G Sbjct: 120 ATYGEPVSSPITETDPTAPTNPYGASKLAVDHMISGEANAHGLAAVSLRYFNVAGAYGSC 179 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE ISV D + TP Sbjct: 180 GERHDPESHLIPLVLQVALGQRESISVYGDDYPTP 214 >gi|145294728|ref|YP_001137549.1| hypothetical protein cgR_0676 [Corynebacterium glutamicum R] gi|140844648|dbj|BAF53647.1| hypothetical protein [Corynebacterium glutamicum R] Length = 335 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 4/117 (3%) Query: 24 VEIIRVGRPDIDLLKPKDFA---SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 +E I +P +++ +D A S + P I+ AA AV ++ ++P + +IN G Sbjct: 49 IEEITGSKPPLEIGDIRDRAFVDSVLAQYQPSAAIHFAAKKAVGESVEQPTMYLNINIGG 108 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + A G+ I S+ G + +P++E SPT P N Y +KL GE+ ++ Sbjct: 109 TATLLDALHHAGVRDIVFSSSCSVHGETTHSPLNEDSPTQPANPYAFTKLTGEKMLS 165 >gi|146306900|ref|YP_001187365.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145575101|gb|ABP84633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 285 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 14/197 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L S PDV+IN ++P A INA +A+ + G Sbjct: 53 VDVLDQDTLTSVMARVKPDVVINCVGLIKQLADANDPLTALPINAMLPHRLARLCELAGA 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++STD VF G + E ++ ++YGKSK GE N + LRT+ + Sbjct: 113 RLIHVSTDCVFSGRKGMYV-EGDLSDAEDLYGKSKYIGE---LHEWPNAITLRTSIIGHE 168 Query: 154 FGSNFLLSMLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 GS L L+++ + F G PT L I H T L G++ Sbjct: 169 LGSCHALVDWFLSQQNGVLGFARAVFSGLPTVELARVMKDFVIPH-------TELAGLYQ 221 Query: 213 MTADGGPVSWADFAEYI 229 + A+ P++ D + Sbjct: 222 VAAE--PITKLDLLRLL 236 >gi|196230014|ref|ZP_03128877.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] gi|196225611|gb|EDY20118.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] Length = 323 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 15/163 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K D PD +++ AA V ++ + P F N G + A ++G+ Sbjct: 51 DLQKECDIHDAMEHARPDAVMHFAANALVGESMENPSKYFRNNVYGGLNLLDAMVAVGVK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST F R PIDE P P+N YG+SKL E+ + Y +V LR Sbjct: 111 KFVFSSTCATFGPPDRLPIDETLPQRPINPYGESKLMFEKILRWYDEIHGLKFVALRYFN 170 Query: 147 TAWVYSIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 A FG ++ + ++L++A +RE + + + TP Sbjct: 171 AAGATERFGEDHRIETHLIPNVLKVALGQRENVQIFGTDYETP 213 >gi|115377423|ref|ZP_01464627.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1] gi|310820399|ref|YP_003952757.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|115365580|gb|EAU64611.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1] gi|309393471|gb|ADO70930.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] Length = 302 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 26/244 (10%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D +P A + ++ + + E PE A + +A A + + A ++ Sbjct: 46 LDASRPGAIAEAVGATGAHAVVLVHGPSDITGCESAPEAAMATHAGIATHLCQEAPTVRK 105 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 + ISTD VFDG T DE +P N YG++KLA E + + +I+RT+ VY Sbjct: 106 --VLISTDNVFDGQD-TGYDESRAPSPANAYGRAKLAAERVLLAADPGALIVRTSLVYGY 162 Query: 154 FG-------SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 NF + + + + + D + TP A + + LI + Sbjct: 163 EPRGPGRGWRNFFMVVADTVRSGQTVQAPVDHWNTPILVDDAAAVLTR----LIPGGPS- 217 Query: 207 LRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 G+ H+ GP VS ++ I A+ G + R + + RPA +CL Sbjct: 218 --GVLHLA---GPDRVSRFEWGRLI----AQSLGQDPNLVRPVARAAGRYSCRPANACLR 268 Query: 265 CSKL 268 +L Sbjct: 269 SLRL 272 >gi|325672692|ref|ZP_08152388.1| UDP-glucose 4-epimerase [Rhodococcus equi ATCC 33707] gi|325556569|gb|EGD26235.1| UDP-glucose 4-epimerase [Rhodococcus equi ATCC 33707] Length = 317 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ + PE + N A+ +A G P ++ ST + RT Sbjct: 56 DGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTPRLVFSSTAATYGEPERT 115 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +PT P N YG +KLA + + SY N + + T+ Y Sbjct: 116 PITEDAPTRPTNPYGATKLAIDHAITSYANAHSLAATSLRY 156 >gi|258645828|ref|ZP_05733297.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403198|gb|EEW96745.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 337 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AA + V ++ EP +S N EG + G+ ++ ST V+ +T Sbjct: 69 DGVIHFAASSLVAESMVEPGKYYSNNVEGTLHLLLGMRKAGVDKIVFSSTAAVYGEPEKT 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI+E P NP N+YG++KL E+ + A+Y +YV LR Sbjct: 129 PIEEDFPHNPTNVYGRTKLVIEDMMRDFTAAYGLSYVALR 168 >gi|254512471|ref|ZP_05124538.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium KLH11] gi|221536182|gb|EEE39170.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium KLH11] Length = 327 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 DL + F + P +++ AA + V +A EP +S N G+ + +AA D+ + Sbjct: 51 DLSDRARLDAVFAKYQPAAVMHFAALSQVGEAMSEPGRYWSNNVTGSLNLIQAAVDAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE +P +PLN YG SK A E+ + A+Y N+VI R Sbjct: 111 NFVFSSTCATYGEHDNVVLDETTPQHPLNAYGASKRAIEDILRDYQAAYGLNHVIFR 167 >gi|312139420|ref|YP_004006756.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] gi|311888759|emb|CBH48071.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] Length = 331 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ + PE + N A+ +A G P ++ ST + RT Sbjct: 70 DGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTPRLVFSSTAATYGEPERT 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +PT P N YG +KLA + + SY N + + T+ Y Sbjct: 130 PITEDAPTRPTNPYGATKLAIDHAITSYANAHSLAATSLRY 170 >gi|229582798|ref|YP_002841197.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|228013514|gb|ACP49275.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] Length = 319 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF P++I+N AA T VD++ +P+ + N G I +A +++STD V+ Sbjct: 66 SFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLYNFKYVHVSTDEVY--- 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 123 GEECADENSPLNPSSPYSASKASADLLVKSYVRTY 157 >gi|227826953|ref|YP_002828732.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|229584124|ref|YP_002842625.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] gi|227458748|gb|ACP37434.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|228019173|gb|ACP54580.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] Length = 318 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF P++I+N AA T VD++ +P+ + N G I +A +++STD V+ Sbjct: 65 SFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLYNFKYVHVSTDEVY--- 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 122 GEECADENSPLNPSSPYSASKASADLLVKSYVRTY 156 >gi|120602752|ref|YP_967152.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris DP4] gi|120562981|gb|ABM28725.1| UDP-galactose 4-epimerase [Desulfovibrio vulgaris DP4] Length = 331 Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V DV+++R DLL + F S D +++ +A + V ++ +P I F N G Sbjct: 48 VGDVDLVRG-----DLLDRQALRRLFAEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVG 102 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A G+ ++ S+ VF I E P P+N YG+SKL E+ + Y Sbjct: 103 TINLLEAMREAGVSRLVFSSSAAVFGNPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYA 162 Query: 140 NNY 142 N Y Sbjct: 163 NAY 165 >gi|238619096|ref|YP_002913921.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] gi|238380165|gb|ACR41253.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.4] Length = 318 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF P++I+N AA T VD++ +P+ + N G I +A +++STD V+ Sbjct: 65 SFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLYNFKYVHVSTDEVY--- 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 122 GEECADENSPLNPSSPYSASKASADLLVKSYVRTY 156 >gi|42572789|ref|NP_974491.1| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] gi|332656501|gb|AEE81901.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 201 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYISTDYVFDGLSR 109 PDV++N AA + E +P+ A SIN + + ++ I++STD V+ G+ + Sbjct: 80 PDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLLIHLSTDQVYQGV-K 138 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 139 SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIF 180 >gi|295695529|ref|YP_003588767.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] gi|295411131|gb|ADG05623.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] Length = 321 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 I + + A F +F P+++I+ AA + V ++ +P IN G + G+ Sbjct: 50 IQSVDSESVAHVFEAFRPEIVIHLAAQSNVPRSIQDPLSDTRINVLGTVNVLNQCRDYGV 109 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTA 148 IY S+ V+ IDE P P++ YG SK E V +Y +Y ILR A Sbjct: 110 RKVIYASSAAVYGHPQYLAIDEEHPVRPVSFYGISKYTPELYVRTYGELYGLDYTILRFA 169 Query: 149 WVY 151 VY Sbjct: 170 NVY 172 >gi|46579771|ref|YP_010579.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|46449186|gb|AAS95838.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|311233562|gb|ADP86416.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris RCH1] Length = 331 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V DV+++R DLL + F S D +++ +A + V ++ +P I F N G Sbjct: 48 VGDVDLVRG-----DLLDRQALRRLFAEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVG 102 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A G+ ++ S+ VF I E P P+N YG+SKL E+ + Y Sbjct: 103 TINLLEAMREAGVSRLVFSSSAAVFGNPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYA 162 Query: 140 NNY 142 N Y Sbjct: 163 NAY 165 >gi|301619909|ref|XP_002939327.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like isoform 1 [Xenopus (Silurana) tropicalis] Length = 349 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 5/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F + ++I++ AA T VD + + +N G + AA G+ Sbjct: 73 DICDPDFIKLVFEKENLNIILHFAAQTHVDLSFLQSFKFAYVNTYGTSILLNAAHGAGVE 132 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +YISTD V+ G DE SP P N Y SK A E V S+ + VI R++ Sbjct: 133 KFVYISTDEVYGGSLNEEFDESSPKRPTNPYASSKAAAESFVLSFWEQHKFPVVITRSSN 192 Query: 150 VY 151 VY Sbjct: 193 VY 194 >gi|15807711|ref|NP_285365.1| thymidine diphosphoglucose 4,6-dehydratase [Deinococcus radiodurans R1] gi|6460562|gb|AAF12268.1|AE001862_94 thymidine diphosphoglucose 4,6-dehydratase [Deinococcus radiodurans R1] Length = 364 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----DGL 107 D+I+N AA T VD++ P + N G + + A +GI +ISTD V+ DG Sbjct: 89 DLIVNFAAETHVDQSILGPLVFTETNVRGTHVLLEVARELGIRLHHISTDEVYGHIKDGH 148 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 DE +P +P Y SK A ++ V +Y Y I Sbjct: 149 QSVETDELAPRSP---YAASKAAADQLVQAYAITYGI 182 >gi|227829949|ref|YP_002831728.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|229578390|ref|YP_002836788.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|284996980|ref|YP_003418747.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] gi|227456396|gb|ACP35083.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.S.2.15] gi|228009104|gb|ACP44866.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|284444875|gb|ADB86377.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] Length = 318 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF P++I+N AA T VD++ +P+ + N G I +A +++STD V+ Sbjct: 65 SFRPEIIVNFAAETHVDRSIYKPQDFVTTNILGTVNILEALRLYNFKYVHVSTDEVY--- 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 122 GEECADENSPLNPSSPYSASKASADLLVKSYVRTY 156 >gi|309792226|ref|ZP_07686698.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] gi|308225767|gb|EFO79523.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] Length = 300 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 27/177 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGRPDIDLLKPKDF----------- 42 MK ++ G G I L V D ++ + GRP +L++ +D Sbjct: 1 MKIIITGGAGFIGSHLVDRLVHDRAGELIVIDSMLRGRP-ANLVQHRDNPLVQVVNADIR 59 Query: 43 ---ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 A L DVI + AA + V A + +FS N G I +AA G+ ++ Sbjct: 60 DAEAMRSLCAGADVIYHLAAQSNVMGAVSDLSYSFSTNVAGTVNILEAARLNGVRRVVFT 119 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 S+ V+ + + P+ E +P N N YG SK AGE + N Y ++R A VY Sbjct: 120 SSREVYGEVDQLPVREEAPFNAKNAYGASKAAGELYARVFLNTYSVETAVVRLANVY 176 >gi|39937640|ref|NP_949916.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris CGA009] gi|192293421|ref|YP_001994026.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris TIE-1] gi|39651499|emb|CAE30022.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris CGA009] gi|192287170|gb|ACF03551.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris TIE-1] Length = 327 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 6/112 (5%) Query: 41 DFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 DF + P + II+ AA V ++ +P + N A + + A + G+P ++ Sbjct: 59 DFVGRIMDEHPIEAIIHFAASIVVPESVTQPLAYYGNNTANARTLLECAVNHGVPHVVFS 118 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ST V+ RTP++E PT P+N YG+SKL E +A +Y +Y LR Sbjct: 119 STAAVYGEPDRTPVEEDDPTRPINPYGRSKLMVEWMLADIAQAYPFSYAALR 170 >gi|294505718|ref|YP_003569778.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294352124|gb|ADE72447.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 305 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K L P+++ + AA V + ++P+ +N +G I +A + I+ Sbjct: 55 KQARQIILQEKPNIVFHLAAQADVSTSINDPQYDADVNVKGTINILEACRDASVDKIIFA 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 ST V+ L + I E PT P++ YG SKL E + ++ +Y ILR VY Sbjct: 115 STSAVYGELQKDLITEMDPTAPISYYGLSKLTAESYIRLFSRLYGLSYTILRYGNVY 171 >gi|294625685|ref|ZP_06704306.1| UDP-glucose 4-epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599989|gb|EFF44105.1| UDP-glucose 4-epimerase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 389 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 27/161 (16%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++A+ +C+ D ++ + RP+ +D+ Sbjct: 1 MRILVTGGTGYIGSHTCVELARRGHEVCIVDNLSNSSERVLDHLQHLMGFRPEFHRMDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P + A + D +++ AA AV ++ EP + F+ N G A+ +A + + C Sbjct: 61 AP-ELADLLIGKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAKV-CNL 118 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 ++ S+ V+ + +PIDE +P +N YG++KL EE + Sbjct: 119 VFSSSATVYGDANHSPIDESAPLKAINPYGRTKLMMEEMIG 159 >gi|260469613|ref|ZP_05813778.1| UDP-glucose 4-epimerase [Mesorhizobium opportunistum WSM2075] gi|259028639|gb|EEW29950.1| UDP-glucose 4-epimerase [Mesorhizobium opportunistum WSM2075] Length = 342 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 2/142 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD-FASFFLSFSPDVIINPAAYT 61 C ++ G + + ++C + + + G + ++ +D + + P II+ AA Sbjct: 20 CKLLAAAGYLPVAFDNLCRGNEKSVLWGPLVVGDIRDRDALQAAIAAHRPTAIIHFAALA 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ EP +S N G A+ AA + I I S+ G+ P+ E S NP Sbjct: 80 YVGESVQEPADYYSTNVMGTIAVLDAARANSIENIIFSSSCATYGVPEALPVRESSSQNP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNY 142 ++ YG++KL GE+ + Y + Y Sbjct: 140 ISPYGRTKLMGEQIIGDYASAY 161 >gi|15616277|ref|NP_244582.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans C-125] gi|10176339|dbj|BAB07434.1| UDP-glucose 4-epimerase (galactowaldenases) [Bacillus halodurans C-125] Length = 282 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 12/208 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G N I S + ++ E +V + DL K KDF+ + DV+++ A Sbjct: 4 VLITGANSYIGLSFKNWLAKEPEKYKVDSISLRGDLWKEKDFSQY------DVLLHAAGI 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 + + ++ E+ F +N + A AK A GI I++S+ V+ G ID + Sbjct: 58 AHIKETKENKELYFKVNRDVAYEAAKKAKDEGIKQFIFLSSMSVY-GKENGIIDLDTLPK 116 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG+SKL E+ + ++ + T I+G + +LAK R++ V D Sbjct: 117 PTSNYGESKLQAEKLIEMLDDDSFKVVTIRPPMIYGKGCKGNYPKLAKLARKLPVFPD-V 175 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSL 207 S + I + + +I+N+D L Sbjct: 176 ENERSMIHIEN-LCEFMKLIIDNNDAGL 202 >gi|288904421|ref|YP_003429642.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus UCN34] gi|306830454|ref|ZP_07463624.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977418|ref|YP_004287134.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731146|emb|CBI12692.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus UCN34] gi|304427479|gb|EFM30581.1| UDP-glucose 4-epimerase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177346|emb|CBZ47390.1| galE [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 332 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 36/221 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG----------RPDIDL----LKPKDFAS 44 M LV+G G I + V+ D +++ V PD L +DF Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEKGDEKVVVVDSLVTGHRAAVHPDATFYQGDLADQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + +PD+ +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFTENPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNEFGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-L 160 G+ PI E +P P+N YG+SKL E I++ W +G F+ L Sbjct: 121 ATYGIPDEIPIKETTPQRPINPYGESKLMME----------TIMK--WSDQAYGIKFVPL 168 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +A + + S+ D G T L I I+Q+A + E Sbjct: 169 RYFNVAGAKPDGSIGEDH-GPETHLLPI---ILQVAQGVRE 205 >gi|239827438|ref|YP_002950062.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] gi|239807731|gb|ACS24796.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] Length = 328 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 16/153 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F D +I+ AA + V ++ EP + N G + + + G+ I + ST V+ Sbjct: 61 FRKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNEFGVKQIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG----- 155 + PI E PT P N YG++KLA E+ + +Y Y+ LR V +G Sbjct: 121 GEPKQIPIVETDPTLPTNTYGETKLAMEKMMKWVDRAYGIRYISLRYFNVAGAYGTIIGE 180 Query: 156 -----SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++ +R EI + D + TP Sbjct: 181 DHNPETHLIPLILKVPLGQREEIHIFGDDYDTP 213 >gi|322373261|ref|ZP_08047797.1| UDP-glucose 4-epimerase [Streptococcus sp. C150] gi|321278303|gb|EFX55372.1| UDP-glucose 4-epimerase [Streptococcus sp. C150] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDKAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|71083231|ref|YP_265950.1| NAD-dependent epimerase/dehydratase family protein [Candidatus Pelagibacter ubique HTCC1062] gi|91762339|ref|ZP_01264304.1| NAD dependent epimerase/dehydratase family protein [Candidatus Pelagibacter ubique HTCC1002] gi|71062344|gb|AAZ21347.1| NAD dependent epimerase/dehydratase family [Candidatus Pelagibacter ubique HTCC1062] gi|91718141|gb|EAS84791.1| NAD dependent epimerase/dehydratase family protein [Candidatus Pelagibacter ubique HTCC1002] Length = 287 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%) Query: 91 IGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 I + C I++S+ VFDG + ++ P PLN YGK+K E+ + T NY+ILRT+ Sbjct: 97 IKLKCKIIFMSSVEVFDGKKKYFLETDKPK-PLNFYGKAKYKIEKYIQKKTKNYLILRTS 155 Query: 149 W 149 W Sbjct: 156 W 156 >gi|116628119|ref|YP_820738.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMD-9] gi|18265748|gb|AAL67298.1|AF389475_4 UDP-glucose 4-epimerase [Streptococcus thermophilus] gi|52001508|gb|AAU21560.1| GalE [Streptococcus thermophilus] gi|116101396|gb|ABJ66542.1| UDP-galactose 4-epimerase [Streptococcus thermophilus LMD-9] gi|312278718|gb|ADQ63375.1| UDP-glucose 4-epimerase, putative [Streptococcus thermophilus ND03] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|52001496|gb|AAU21550.1| GalE [Streptococcus thermophilus] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDKAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|18265740|gb|AAL67291.1|AF389474_4 UDP-glucose 4-epimerase [Streptococcus salivarius] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|52001491|gb|AAU21546.1| GalE [Streptococcus thermophilus] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMRWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|55823311|ref|YP_141752.1| UDP-glucose 4-epimerase [Streptococcus thermophilus CNRZ1066] gi|52001502|gb|AAU21555.1| GalE [Streptococcus thermophilus] gi|55739296|gb|AAV62937.1| UDP-glucose 4-epimerase [Streptococcus thermophilus CNRZ1066] Length = 333 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|332686111|ref|YP_004455885.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] gi|332370120|dbj|BAK21076.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] Length = 329 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP- 94 ++ K+F S F + + II+ AA + V ++ ++P + F+ N G + + G+ Sbjct: 52 IRDKEFLKSVFKKENIEGIIHFAANSLVGESVEKPLMYFNNNVYGMQILLEVMQEFGVKK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + TPI E +PTNP N YG+SKL E+ + +Y ++V LR Sbjct: 112 IVFSSTAATYGEPKETPIKETTPTNPTNPYGESKLMMEKMMKWCDGAYGMHFVALR 167 >gi|323137045|ref|ZP_08072125.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322397806|gb|EFY00328.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 288 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 73/310 (23%), Positives = 116/310 (37%), Gaps = 51/310 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFASF 45 M+ LV+G G + L D E+I R +D+L A Sbjct: 1 MRVLVLGATGMLGHKLVETLSPDFEVIATRRRGAVEPTTAKGVRMVEGVDVLDRSAIAGL 60 Query: 46 FLSFSPDVIINPAAYTA-VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + PD ++N + A + EI +IN+ +A+ G I+ STD VF Sbjct: 61 IAAQRPDAVLNAVGVVKQITDAVNTSEI-IAINSMLPNLLAEVCSVAGCRLIHFSTDCVF 119 Query: 105 DGLSRTPID------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 G +R I E P + ++YG SKL GE S T + LRT+ + + Sbjct: 120 TG-ARDSIRGADGYREQDPPDARDLYGLSKLLGE----SRTPGCLTLRTSIIGPELRGRY 174 Query: 159 LLSMLRLAKERREISVVCDQF--GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L LA+ + G PT L A I H SL G++H+ Sbjct: 175 GLLEWFLAQGDATVLGFSKALFTGLPTVILAEIVATILTKH-------ASLEGLYHVAVT 227 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 P+S + +F ++ +R + +++ + LD ++LAN Sbjct: 228 --PISKYELLN-LFGDAYDRSTSIIEDSKLYCDRR-----------LDGAQLANAIGWSA 273 Query: 277 STWKEGVRNI 286 W E VR + Sbjct: 274 PAWPELVRRM 283 >gi|311694790|gb|ADP97663.1| UDP-Glucose 4-empimerase [marine bacterium HP15] Length = 341 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK-------PKDFASFFLSFSP-- 51 MK LV G+ G I + M ++ E V D DL + P D S + Sbjct: 1 MKVLVTGHRGFIGTVMVPMLLE--EGFDVTGLDTDLYRYCTYGDEPMDVPSIYKDVRDVT 58 Query: 52 -------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D I++ AA + P++ + IN + IA+ A S+G+ ++ S+ + Sbjct: 59 AKDLEGFDAIVHLAALSNDPLGNINPDLTYDINYHASVKIAELARSVGVQRFLFASSCSM 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 + + +DE + NP+ Y KSK+ EE K+AS T + V LR A Y + Sbjct: 119 YGKAGQDVLDETAQFNPVTPYAKSKVLVEEDVSKLASDTFSPVFLRNATAYGV 171 >gi|167648867|ref|YP_001686530.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] gi|167351297|gb|ABZ74032.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] Length = 349 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 34/178 (19%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPDIDLLKPKDFASF--------- 45 MK L+ G G I SL + V +++ + I+L + +D A + Sbjct: 1 MKILITGGAGFIGSSLVRSALGAGHAVVNLDALTYAGNAINLTEVEDAAGYVFEHVDIVD 60 Query: 46 -------FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---------- 88 F PD +++ AA + VD++ D P N G + +AA Sbjct: 61 AAAVDAVFARHRPDAVMHLAAESHVDRSIDGPLAFVRTNVMGTAVLLEAARRHWRGLDPE 120 Query: 89 DSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ++ I++STD V+ L P DE SP +P + Y SK A + ++ Y + Sbjct: 121 RAVAFRFIHVSTDEVYGALGPDDPPFDEHSPIDPTSPYASSKAASDLLARAWQRTYAL 178 >gi|116075546|ref|ZP_01472805.1| putative nucleotide sugar epimerase [Synechococcus sp. RS9916] gi|116066861|gb|EAU72616.1| putative nucleotide sugar epimerase [Synechococcus sp. RS9916] Length = 344 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + P V++N AA V + + P N G G I + G+ +Y S+ Sbjct: 79 ALFAAERPRVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCRHHGVENLVYASSSS 138 Query: 103 VFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSN 157 V+ G P DE P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 139 VYGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRP 198 Query: 158 FLLSML 163 + ML Sbjct: 199 DMAPML 204 >gi|319940196|ref|ZP_08014549.1| NAD-dependent epimerase/dehydratase [Streptococcus anginosus 1_2_62CV] gi|319810667|gb|EFW06997.1| NAD-dependent epimerase/dehydratase [Streptococcus anginosus 1_2_62CV] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 8/150 (5%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 G + + +L+S + V++ R ++D+ ++ S+ D +++ A V ++ Sbjct: 25 GYDVHVLDNLASGVREAVDV-RAHFKELDVYDESALKAYLQSYKIDAVLHCAGEIVVSES 83 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSRTPIDEFSPTNPLNIY 124 + P F+ N G + K +GI I+ ST V+ + P +E + NP+N Y Sbjct: 84 IENPSKYFAANVAGMNRVLKVLSEVGIDKIIFSSTASVYGNNCMDKPANEDTLLNPVNPY 143 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 ++KL GE + ++ R +W Y IF Sbjct: 144 AETKLMGERMIY-----WMAKRYSWKYVIF 168 >gi|170755592|ref|YP_001782294.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] gi|169120804|gb|ACA44640.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] Length = 305 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + +V + R I+ + + A+ F D++ + AA Sbjct: 19 KFIGMGNDVCIIDNLSTGNINNVN--KKARLYINDILDSNIANIFKKEKFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ V+ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAVYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|163758304|ref|ZP_02165392.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] gi|162284593|gb|EDQ34876.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] Length = 326 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY-VFDGLSRT 110 DV+ + AA ++ D+P + IN G + +AA G+ + +S+ +F L + Sbjct: 85 DVVFHLAAAVGNKRSIDDPRLDADINVMGTVTLMEAARKAGVGRVVVSSSAGIFGELKKL 144 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSN 157 PI E P +P + YG SKL E+ SY+ Y I A Y +++G N Sbjct: 145 PISEDHPIDPDSPYGASKLFKEKFSLSYSKLYDIGVVALRYFNVYGIN 192 >gi|315221611|ref|ZP_07863531.1| UDP-glucose 4-epimerase [Streptococcus anginosus F0211] gi|315189445|gb|EFU23140.1| UDP-glucose 4-epimerase [Streptococcus anginosus F0211] Length = 331 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 7/136 (5%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V+D +R ++D+ + S D +++ A V ++ + P F+ N G Sbjct: 38 VRDAVDVRAHFKELDVYDELALKDYLQSHKIDAVLHCAGEIVVSESIENPSKYFAANVAG 97 Query: 81 AGAIAKAADSIGI-PCIYISTDYVF-DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + K +GI I+ ST V+ + P +E + NP+N Y ++KL GE + Sbjct: 98 MNRVLKVLSEVGIDKIIFSSTASVYGNNCMDKPANEDTLLNPVNPYAETKLMGERMIYWM 157 Query: 139 TNNYVILRTAWVYSIF 154 N Y +W Y IF Sbjct: 158 ANRY-----SWKYVIF 168 >gi|225679462|gb|EEH17746.1| methionine adenosyltransferase 2 subunit beta [Paracoccidioides brasiliensis Pb03] Length = 344 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLN 122 DK + + + A IN ++A+ + I IYISTDYVF G P + + T P N Sbjct: 106 DKCDLDQDAARKINVAATKSLARETSARSILLIYISTDYVFPGKPDEAPYEVSAKTEPPN 165 Query: 123 IYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSN 157 IYG++K GE V T V+LR +Y N Sbjct: 166 IYGETKRDGEIAVLEETRQSALGVVLRVPVLYGPTKQN 203 >gi|254516941|ref|ZP_05128999.1| RmlD substrate binding domain superfamily protein [gamma proteobacterium NOR5-3] gi|219674446|gb|EED30814.1| RmlD substrate binding domain superfamily protein [gamma proteobacterium NOR5-3] Length = 293 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 18/216 (8%) Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 E+ ++ E A ++KA + I + +S+D VF G + EF + + G + Sbjct: 69 EVPQPLHVERAHWLSKACEHSDITYLLLSSDQVFAGQGVRSLREFDAPDAFSEPGLQIME 128 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 E +V + ++LRT +++ +NFL ML RE + P + + +AR Sbjct: 129 IESRVTQAAPSAIVLRTGPLFASSDNNFLTRMLARMISEREATFDDQHIFCPVACIDVAR 188 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD-FAEYIFWESAERGGPYSKVYR---- 245 + + L + S G++H ++ AD EY F E+A YR Sbjct: 189 VLAAMLDQLSVGAQAS--GVYHYSS-------ADRTTEYGFAEAALAA---MSQYRDSGD 236 Query: 246 -IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + + Q + DC +L ++ I+ W+ Sbjct: 237 VVISPQQDSPDGSTETRVFDCGRLRDSFAIKQVPWR 272 >gi|313126810|ref|YP_004037080.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] gi|312293175|gb|ADQ67635.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] Length = 316 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 14/181 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL D A ++ DV+ + AAYT + A+ P F N E + + + +G+ Sbjct: 55 DLTDASDVAEV-ITEDVDVVFHFAAYTDTNYAD--PRKLFEENTEMTYNVLERMEEVGVS 111 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 I + S+ V+ R ++++P P+++YG SKLA E +++Y ++ + T W++ Sbjct: 112 NIAFTSSSTVYGEAPRPTPEDYAPLEPISVYGASKLADEGLLSTYAHSKDV--TVWLFRF 169 Query: 152 -SIFG----SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 +I G N + + E E + S L + + I+H ++EN++ S Sbjct: 170 ANIVGPKQRGNVIPDFIEKLLEDPETLTILGNGRQEKSYLHVEDCVRAISH-VVENAEQS 228 Query: 207 L 207 + Sbjct: 229 M 229 >gi|206563875|ref|YP_002234638.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] gi|198039915|emb|CAR55892.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] Length = 329 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 16/158 (10%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDV--EIIRVGRPDI---------DLLKPKDFASF 45 MK LV G G I ++L+ + V + + G D D+L + Sbjct: 1 MKVLVTGGAGYIGSHTCKALAEAGHEPVAYDNLSTGHRDAVRWGPLVAADILDRDALSRA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + PDV+I+ AA V ++ PE +++N G + A + G+ I +S+ Sbjct: 61 LAAHRPDVVIHFAALAYVGESVLAPERYYTVNVTGTCTLLSAMRAAGVGRIVMSSSCATY 120 Query: 106 GLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ PI E +P P+N YG +K A E A + Y Sbjct: 121 GIPEALPISERTPQRPINPYGFTKYAMERMAADFERAY 158 >gi|86607290|ref|YP_476053.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] gi|86555832|gb|ABD00790.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] Length = 336 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 2/144 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYT 61 C + +G + + ++ +R G +I D+ + + P+ +I+ AAY Sbjct: 17 CKALAAHGHLPIAYDNLVYGHPWAVRWGPLEIGDIADRQRLDQVIRQYRPEGVIHFAAYA 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V ++ +P + N G+ + +A GIP ++ ST + + PI E P P Sbjct: 77 YVGESVKDPGKYYRNNVAGSLTLLEAMRDHGIPYLVFSSTCATYGVPEQIPIPETHPQRP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVI 144 +N YG+SKL E+ + + + I Sbjct: 137 INPYGQSKLVVEQMLRDFQTAHGI 160 >gi|20799640|gb|AAM28584.1|AF503446_7 UDP glucose 4-epimerase [Streptococcus thermophilus LMG 18311] Length = 336 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMIKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|1169830|sp|P13226|GALE_STRLI RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase Length = 329 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 17/168 (10%) Query: 37 LKPKDFAS--FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 ++ +DF F S D +++ AA++ V ++ +PE + N G A+ +A G+ Sbjct: 54 IRDQDFMRKVFRGRLSFDGVLHFAAFSQVGESVVKPEKYWDNNVGGTMALLEAMRGAGVR 113 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-S 152 ++ ST + + PI E +PT P N YG SKLA + + + + + Y + Sbjct: 114 RLVFSSTAATYGEPEQVPIVESAPTRPTNPYGASKLAVDHMITGEAAAHGLGAVSVPYFN 173 Query: 153 IFGSN------------FLLSMLRLAKERRE-ISVVCDQFGTPTSALQ 187 + G+N + +L++A+ RRE ISV D + TP + ++ Sbjct: 174 VAGANRGVRLVHDPESHLIPLVLQVAQGRREAISVYGDDYPTPDTCVR 221 >gi|168333305|ref|ZP_02691589.1| UDP-glucose 4-epimerase [Epulopiscium sp. 'N.t. morphotype B'] Length = 330 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 23/168 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRPD------IDLLKPKDFAS 44 MK LV+G G I ++ DV ++ R P+ +D+ Sbjct: 1 MKILVVGGAGYIGSHAVRNLLREGFDVAVVDSLQTGFRASVPEGVPFYQVDIRDTAALEE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F D +++ AA + V ++ ++P +S N GA ++ A G+ I + ST Sbjct: 61 VFEKEQVDGVMHFAANSLVGESMEKPLKYYSNNVGGAESLLSAMIKFGVKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR 146 + + PI E +PT P N YG++KLA EK+ +T+ NYV LR Sbjct: 121 YGDVKIMPITEETPTAPTNTYGETKLA-IEKMLKWTSVAHDLNYVCLR 167 >gi|119513274|ref|ZP_01632315.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] gi|119462062|gb|EAW43058.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] Length = 326 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 13/184 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F +++ AA V ++ P ++ N + + +G+ Sbjct: 48 DLKDSTTLSQVFSQHEFTAVLHFAASLNVPESVSRPLDYYANNTCNTLNLLRCCHKMGVK 107 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAW 149 I+ ST V+ + P+ E++PT P+N YG+SKLA E + Y YVILR Sbjct: 108 QIIFSSTAAVYGQPEKIPVTEYTPTQPINPYGRSKLACEWLIRDYAQASDLRYVILRYFN 167 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 V L MLR A I V CD +ALQ + + T++R Sbjct: 168 VAGAEPGGRLGQMLRDASHL--IRVSCD------AALQRRTEVKIFGTDFPTPDGTAIRD 219 Query: 210 IFHM 213 H+ Sbjct: 220 YIHV 223 >gi|297157769|gb|ADI07481.1| UDP-glucose 4-epimerase [Streptomyces bingchenggensis BCW-1] Length = 324 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A +L S D +++ AA++ V ++ PE + N G + A G+ ++ ST Sbjct: 61 AGKWLDPSFDGVLHFAAFSQVGESVVNPEKYWVNNVGGTTDLLAAMREAGVRKLVFSSTA 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + + PI E +PT P N YG +KLA + + A++ V LR A Y + Sbjct: 121 ATYGEPEQVPITEDAPTAPTNPYGATKLAVDHMISGECAAHGLAAVSLRYFNVAGAYGAY 180 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A+ RRE ISV D + TP Sbjct: 181 GERHDPESHLIPLVLQVAQGRREAISVYGDDYPTP 215 >gi|329929665|ref|ZP_08283362.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] gi|328935991|gb|EGG32446.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] Length = 340 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ EPEI + N G + AA G+ +++STD V+ L T Sbjct: 75 DVVVNFAAESHVDRSILEPEIFVNTNVMGTQVLLDAAKKYGVTKFVHVSTDEVYGSLGET 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK G+ V +Y + Sbjct: 135 GLFSETTPLAPNSPYSASKAGGDLLVRAYHETF 167 >gi|78061717|ref|YP_371625.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] gi|77969602|gb|ABB10981.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] Length = 329 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 22/170 (12%) Query: 1 MKCLVIGNNGQIA----QSLSSMCVQDV--EIIRVGRPDI---------DLLKPKDFASF 45 MK LV G G I ++L++ + V + + G D D+L + Sbjct: 1 MKVLVTGGAGYIGSHTCKALAAAGHEPVAYDNLSTGHRDAVRWGPLVTADILDRDALSKA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS----TD 101 F + PDV+I+ AA V + P+ +++N G + A + G+ I +S T Sbjct: 61 FAAHRPDVVIHFAALAYVGDSVLAPDRYYTVNVTGTCMLLSAMHAAGVGRIVMSSSCATY 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + DGL PI E +P P+N YG +K A E A + Y + A Y Sbjct: 121 GIPDGL---PISERTPQRPINPYGFTKYAMERMAADFERAYGLKWVALRY 167 >gi|308070558|ref|YP_003872163.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus polymyxa E681] gi|305859837|gb|ADM71625.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus polymyxa E681] Length = 284 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 15/150 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-------LLKPKD---FASFFLSFS 50 MK L++G NG L Q+ V D LL KD S Sbjct: 1 MKLLILGGNGMAGHVLVK-YFQNQSGYNVFYTTRDPENKGGLLLDVKDSFIVEQLVRSVR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVIIN ED+ A+ IN + + ADSIG I+ISTD VF+G +R Sbjct: 60 PDVIINAVGVLNQHAGEDQIA-AYQINGLLPHLLRRTADSIGARLIHISTDCVFEG-NRV 117 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASY 138 P E + + Y +K+ GE K A + Sbjct: 118 PGLYKETDQPDGTSAYALTKILGEVKAAGH 147 >gi|121534554|ref|ZP_01666376.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] gi|121306806|gb|EAX47726.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] Length = 306 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 26/174 (14%) Query: 1 MKCLVIGNNGQIA-----------------QSLSSMCVQDVE-IIRVGRPDIDLLKPKDF 42 MK LV G G I +LS+ C+ +V R + D+ + +D Sbjct: 1 MKVLVTGGAGFIGSHIVDRLIEAGFQTVVLDNLSAGCLANVNPAARFMQKDV---RDRDL 57 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A + D +++ AA T V K+ +P +N G + +A S G+ ++ S+ Sbjct: 58 ADLLRAEPFDFVVHQAAQTTVPKSLTDPYYDCDVNIMGLVNVLEACRSSGVKRIVFASSA 117 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 V+ + P+ E + P + YG SKL E+ + Y N YV LR A VY Sbjct: 118 AVYGDPADLPLSEEADKQPTSFYGLSKLVAEKYLELYYKNFGLEYVALRYANVY 171 >gi|55821387|ref|YP_139829.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMG 18311] gi|55737372|gb|AAV61014.1| UDP-glucose 4-epimerase [Streptococcus thermophilus LMG 18311] Length = 333 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V+ V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMIKLLEVMNECGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ RE I + D + TP Sbjct: 178 PDGSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|257868930|ref|ZP_05648583.1| dTDP-glucose 4,6-dehydratase [Enterococcus gallinarum EG2] gi|257803094|gb|EEV31916.1| dTDP-glucose 4,6-dehydratase [Enterococcus gallinarum EG2] Length = 313 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 47/108 (43%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 ++L + + D +IN AA + VD + + + N G + A I Sbjct: 59 NILDKQLIRRLLKDYKIDCLINFAAESHVDNSIKDANLFVQTNVLGTTCLLDCAKEANIR 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I ISTD V+ LS DE P NP + Y SK + ++ V +Y Y Sbjct: 119 FIQISTDEVYGSLSEGYADENCPLNPSSPYSASKASADQFVCAYHKTY 166 >gi|147918713|ref|YP_687564.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] gi|110622960|emb|CAJ38238.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] Length = 289 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 18/185 (9%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P +++ V+ E+ A N A+AA ++G + S+ VFDG R Sbjct: 57 KPKILVLTEEIDNVEYCEENRMDAMYYNTRAQRYFAEAAQNVGARLVLRSSAMVFDG--R 114 Query: 110 TP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P E TNPLN+Y ++K+ E V T +++++R +Y + NF ++ Sbjct: 115 KPGGMYTEEDHTNPLNVYAETKVMAETAV-DRTKDFLVVRLGELYGAYFDNFASHLVESL 173 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSWAD 224 + + + D + +P AI ++ N + G +H+ GP +S + Sbjct: 174 SMGQNVELATDMYFSPIYLDDAIAAIKELTLN-------GMTGFYHV---AGPERLSHYE 223 Query: 225 FAEYI 229 F + I Sbjct: 224 FGKKI 228 >gi|294056082|ref|YP_003549740.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293615415|gb|ADE55570.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 354 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 17/124 (13%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI--------- 84 IDL A+ F + PD +I+ AA + VD++ D P+ + N G + Sbjct: 57 IDLGDRAALANCFQQYQPDTVIHLAAESHVDRSIDSPDQFIATNVSGTLNLLRVAQDYWS 116 Query: 85 ---AKAADSIGIPCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASY 138 A A D I ++STD V+ L+ +P E SP P + Y SK A + + ++ Sbjct: 117 TLSAAAQDQFRIN--HVSTDEVYGDLNDSPEAAFSESSPYRPSSPYSASKAAADHLIHAW 174 Query: 139 TNNY 142 T Y Sbjct: 175 TRTY 178 >gi|256376937|ref|YP_003100597.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] gi|255921240|gb|ACU36751.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] Length = 332 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 16/151 (10%) Query: 1 MKCLVIGNNGQIAQ-SLSSMCVQDVEII-----RVGRPD---------IDLLKPKDFASF 45 M+ LV G G I ++ + + E++ GR D +D+ Sbjct: 1 MRVLVSGGAGYIGSFTVRGLLARGHEVLVLDNLSTGRRDAVPGQRVEVVDVRDEPAVTRV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD +I+ AA + ++ PE+ +N G + +AA G +S+ Sbjct: 61 AAGFEPDAVIHFAALKSPQESVARPELYLDVNVTGTANLLRAATGHGARYFVLSSSCAVY 120 Query: 106 GLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV 135 G + P+DE +P P++ YG+SKL E V Sbjct: 121 GTPQVCPVDERAPARPVSPYGESKLISERLV 151 >gi|163943377|ref|YP_001642607.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] gi|163865574|gb|ABY46632.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis KBAB4] Length = 307 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 8/133 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSR 109 D +I+ AA VD E +N EG I + GI ++ S+ V+ DG+S Sbjct: 60 DGVIHLAALVGVDNCRSNEEDVVRVNFEGTKNIVEVCIENGIGKLLFSSSSEVYGDGVS- 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLS-MLR 164 P E P + YGK+KL E+ + Y NN +R ++++GS NF++S L+ Sbjct: 119 VPFKENDVKIPKSAYGKAKLMSEDFLKEYANNSFKVRVVRYFNVYGSQQNENFVISKFLK 178 Query: 165 LAKERREISVVCD 177 A +++ D Sbjct: 179 QAHNGENMTIYGD 191 >gi|228477733|ref|ZP_04062362.1| UDP-glucose 4-epimerase [Streptococcus salivarius SK126] gi|228250622|gb|EEK09833.1| UDP-glucose 4-epimerase [Streptococcus salivarius SK126] Length = 333 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L +DF +PDV +I+ AAY+ V ++ ++P F N G + + + G+ Sbjct: 53 LADQDFMRKVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTSGMVKLLEVMNECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P NP+N YG+SKL E + +Y YV LR Sbjct: 113 YIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|329766698|ref|ZP_08258241.1| nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136953|gb|EGG41246.1| nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 296 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 22/170 (12%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--------- 53 LV G++G I L + Q+ ++ + + K K F +F +S S D+ Sbjct: 5 LVTGSSGFIGNYLVHQLLNQNYKVFGISKR-----KQKSFENF-ISHSVDISKVTNSKLR 58 Query: 54 -----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 II+ AA + VD P + IN G + + A I++S+ +V+ Sbjct: 59 NNFSKIIHMAALSDVDYCNLNPSKCYEINVNGTQNMLEIARKNDSEFIFLSSSHVYGNSK 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSN 157 PI E +PL+ Y SK E +Y+ Y + +R A ++S++G N Sbjct: 119 NIPISETESNSPLSHYAASKKMSEILCETYSLTYGLDIRIARIFSVYGPN 168 >gi|297193919|ref|ZP_06911317.1| UDP-glucose 4-epimerase [Streptomyces pristinaespiralis ATCC 25486] gi|197720282|gb|EDY64190.1| UDP-glucose 4-epimerase [Streptomyces pristinaespiralis ATCC 25486] Length = 322 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ L S D +++ AA++ V ++ EPE ++ N G + A S G+ ++ ST Sbjct: 57 AARHLDGSYDGVLHFAAFSQVGESVAEPEKYWANNVGGTMELLAAMRSAGVRTLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 + TPI E PT P + YG +KLA + + A++ V LR V +G Sbjct: 117 ATYGEPVSTPITESDPTAPTSPYGVTKLAVDHMITGEAAAHGLAAVSLRYFNVAGAYGAQ 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A RRE ISV D + TP Sbjct: 177 GERHDPESHLIPLVLQVALGRRESISVYGDDYPTP 211 >gi|116071583|ref|ZP_01468851.1| putative nucleotide sugar epimerase [Synechococcus sp. BL107] gi|116065206|gb|EAU70964.1| putative nucleotide sugar epimerase [Synechococcus sp. BL107] Length = 340 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + P V++N AA V + + P N G G I + G+ +Y S+ V Sbjct: 76 LFSAEQPQVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCRHHGVGNLVYASSSSV 135 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNF 158 + G P DE P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 136 YGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHLYGLSATGLRFFTVYGPWGRPD 195 Query: 159 LLSML 163 + ML Sbjct: 196 MAPML 200 >gi|288818873|ref|YP_003433221.1| UDP-glucose-4-epimerase [Hydrogenobacter thermophilus TK-6] gi|288788273|dbj|BAI70020.1| UDP-glucose-4-epimerase [Hydrogenobacter thermophilus TK-6] gi|308752460|gb|ADO45943.1| UDP-glucose 4-epimerase [Hydrogenobacter thermophilus TK-6] Length = 324 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSL--------------SSMCVQDVEIIRVGRPDI-DLLKPKDFASF 45 MK L+ G G I + ++ E + G+ + DLL + Sbjct: 1 MKVLITGGAGYIGSHVVKLLGEAGHHLLIYDNLSTGSQEAVLYGKLVVGDLLDERKIKEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L F PDV+++ AA +V ++ EP +S N G + A + I+ ST V+ Sbjct: 61 ILDFKPDVVMHFAAKVSVPESVKEPLSYYSNNFCGTMNLLSAMMEAKVRYLIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 P+ E P P+N YG SKL E + + Y+ ++ILR Sbjct: 121 GVPPSIPVKEEDPAFPINPYGWSKLMAERCIMDVASSGYSLGFIILR 167 >gi|119718949|ref|YP_919444.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] gi|119524069|gb|ABL77441.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] Length = 308 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 11/153 (7%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFAS---------FFLSFSPDVIINPAAYTAV 63 ++ + + D VGR D++ + + + FLS D +I+ AA V Sbjct: 22 SRGFQVVVLDDFSRATVGREDLEKVGAEVYEGDVRDAEALRRFLS-GVDAVIHLAALVDV 80 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 ++E+ PE +S+N EG A+ A G+ ++ S+ V+ L E P + Sbjct: 81 RESEERPEEYWSVNVEGTRALLAEASRAGVRKVVFASSAAVYGDLGGLTAGEEVDARPKS 140 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 YG +K GEE ++ V+ +++++G Sbjct: 141 FYGLTKRVGEELCRFFSGRGVVCVALRIFNVYG 173 >gi|99081326|ref|YP_613480.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] gi|99037606|gb|ABF64218.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] Length = 273 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 9/178 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 ++ + G+ G + + +S+ + +V R DL P D++I+ AA Sbjct: 5 LRIFLTGSGGILGRHVSTALLAHAPGAQVLRNTADLTDLAATTRVVQRAGPLDLVIHLAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGA------GAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 VD+ +P +++NA G A A+ + ++ S+ +V+ R PI Sbjct: 65 LVPVDEVCADPARGYAVNAGGTINLLAALAAAEVGQATPARLLHCSSGHVYAAQDR-PIS 123 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERR 170 E PT+P+++YGK+KL GE+ L A ++SI + LR + ERR Sbjct: 124 EEDPTDPVSVYGKTKLMGEQAARDICAQVGRALCVARLFSIHDPAQEGNYLRPSLERR 181 >gi|304394336|ref|ZP_07376259.1| UDP-glucose 4-epimerase [Ahrensia sp. R2A130] gi|303293776|gb|EFL88153.1| UDP-glucose 4-epimerase [Ahrensia sp. R2A130] Length = 332 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + A+ +S + D +I+ AA + ++ +P + N G ++ +A G+ Sbjct: 53 DLQDTERVAATLMSNNIDTVIHFAASAYIGESMTDPGKYYRNNVAGMVSLLEACTVAGVD 112 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I S+ G+ T PI E P+N YG++KL GEE +A Y YVILR Sbjct: 113 KIIFSSSCATYGIPTTLPIRETEQQKPINPYGRTKLIGEEMLADYAAAYGLRYVILR 169 >gi|78183807|ref|YP_376241.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9902] gi|78168101|gb|ABB25198.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9902] Length = 340 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + P V++N AA V + + P N G G I + G+ +Y S+ V Sbjct: 76 LFSAEKPQVVVNLAAQAGVRYSIENPAAYIQSNLVGFGHILEGCRHHGVGNLVYASSSSV 135 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNF 158 + G P DE P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 136 YGGNRNLPFDERQPVNHPVSLYAASKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRPD 195 Query: 159 LLSML 163 + ML Sbjct: 196 MAPML 200 >gi|295687938|ref|YP_003591631.1| UDP-glucose 4-epimerase [Caulobacter segnis ATCC 21756] gi|295429841|gb|ADG09013.1| UDP-glucose 4-epimerase [Caulobacter segnis ATCC 21756] Length = 327 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ + F + +P +++ AA V ++ P F N GA + +AA G+ Sbjct: 51 DIRDAARLDAVFAAHAPIAVLHFAARIEVGESVKNPGAFFDNNVGGAITLIEAARRAGVN 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 ++ ST F P++E P +PLN YG+SKL E+ +A Y + YV ++ Sbjct: 111 AMVFSSTCATFGDPVTLPMNESHPQSPLNPYGRSKLMVEQALADY-DRYVGFKS 163 >gi|303327683|ref|ZP_07358123.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] gi|302862044|gb|EFL84978.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] Length = 269 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P+ F D +++ AA + V ++ ++P F+ N G + +A G+ Sbjct: 51 DIRDPEALDRVFSENRIDAVLHFAASSLVGESMEKPLAYFNNNVHGMQMLLEAMRRHGVD 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ ST V+ R PI+E PT P N YG+SKL E Sbjct: 111 KIVFSSTAAVYGEPRRVPIEESDPTRPANPYGESKLMME 149 >gi|114566267|ref|YP_753421.1| carbohydrate oxidoreductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337202|gb|ABI68050.1| carbohydrate oxidoreductase, putative [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 302 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 39/251 (15%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVGRPDIDLLK--PKDFAS------------- 44 + L++G G + +L S M ++++ R L + P D S Sbjct: 16 RVLILGGTGMLGHTLFSQLMLEPNLDVYATARSSEGLKEWFPADMVSKIRIGVDADNFDT 75 Query: 45 ---FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV+IN +P A ++N+ I+ + G I+ISTD Sbjct: 76 VIRALASIQPDVVINCIGLIKQLPISSDPLSAITVNSLLPHRISLVCRTAGARLIHISTD 135 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF+G S+ E P++ ++YG+SK GE SY + V +RT+ + L Sbjct: 136 CVFNG-SKGNYTEQDPSDAQDLYGRSKFLGE---VSYP-HCVTIRTSIIGHELKGKLGLI 190 Query: 162 MLRLAKE---RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 LA+E R + F T +++AR I ++ ++ N + L G++H++++ Sbjct: 191 EWFLAQEGSIRGFTKAIYSGFPT----VELARIIREV---VLPNKE--LSGVYHVSSE-- 239 Query: 219 PVSWADFAEYI 229 P+S D + Sbjct: 240 PISKYDLLNLV 250 >gi|296134321|ref|YP_003641568.1| NAD-dependent epimerase/dehydratase [Thermincola sp. JR] gi|296032899|gb|ADG83667.1| NAD-dependent epimerase/dehydratase [Thermincola potens JR] Length = 308 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 5/117 (4%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 D F P+V+I+ AA V A+ EP N G + + + IY S Sbjct: 56 DLQDLFAKEKPEVVIHHAAQADVQVAQREPVFDSMTNILGTVNLLQCCITYNAKKLIYAS 115 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 + V+ P+DE P NP++ YG SK E + ++ NY ILR A VY Sbjct: 116 SAAVYGAPCYLPVDENHPVNPISNYGISKYVPELYIKAFHKNFNLNYTILRYANVYG 172 >gi|91773544|ref|YP_566236.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91712559|gb|ABE52486.1| NAD-dependent sugar epimerase [Methanococcoides burtonii DSM 6242] Length = 303 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ A T + ++ + P ++IN G + + + ++ +V+ TP Sbjct: 62 DVLVHLAGMTNIPESFNHPRDVYTINTFGTLNMLEWCRLNDVKRFIYASTFVYGNPQYTP 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 +DE PT P N Y +SKL GEE +Y +Y I + + +++++G Sbjct: 122 VDEKHPTLPNNPYSQSKLIGEELCNAYCRDYGIDVISLRLFNVYG 166 >gi|328478995|gb|EGF48486.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus MTCC 5462] Length = 85 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + PDV+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGIAYRATDAKDLDITDEAAVNQYFADYQPDVVYHCAA 60 Query: 60 YTAVDKAEDE 69 YTAVDKAEDE Sbjct: 61 YTAVDKAEDE 70 >gi|297200269|ref|ZP_06917666.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] gi|297147617|gb|EFH28687.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] Length = 322 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L S D +++ AA + V ++ +PE + N G A+ A G+ ++ ST Sbjct: 55 AAKWLDSSFDGVLHFAASSQVGESVVKPEKYWDNNVGGTMALLGAMREAGVKKLVFSSTA 114 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + PI E +PT P N YG SKLA + + S N + V LR V +G Sbjct: 115 ATYGEPEEVPIVESAPTRPTNPYGASKLAVDFMITSEANAHGLGAVSLRYFNVAGAYGKQ 174 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RRE I+V + + TP Sbjct: 175 GERHDPESHLIPLILQVAQGRREAINVFGEDYPTP 209 >gi|260432001|ref|ZP_05785972.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] gi|260415829|gb|EEX09088.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] Length = 327 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DLL F + P +++ AA + V +A EP + N G+ + +AA + G + Sbjct: 51 DLLDRARLDQVFAKYQPAAVMHFAALSQVGEAMSEPGRYWRNNVTGSLNLIEAAVAAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 ++ ST + +DE +P +PLN YG SK A E+ + + N+VI R Sbjct: 111 DFVFSSTCATYGDHDNVVLDENTPQHPLNAYGASKRAIEDILRDFEQAHGLNHVIFR 167 >gi|42527259|ref|NP_972357.1| UDP-glucose 4-epimerase [Treponema denticola ATCC 35405] gi|41817844|gb|AAS12268.1| UDP-glucose 4-epimerase [Treponema denticola ATCC 35405] Length = 339 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 +I L +C + +E+++ ID+ + +FF S S D +I+ AAY AV ++ ++P Sbjct: 41 KIIPVLEKICSKKLELVQ-----IDIKDKEKLFNFFKSTSIDAVIHLAAYKAVGESVEKP 95 Query: 71 EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 + N G + A + I+ S+ V+ PI E SP + N YG++KL Sbjct: 96 LKYYENNISGLVNLLLAMQEHKVKNFIFSSSATVYGDAKVVPIPENSPISAANPYGRTKL 155 Query: 130 AGEE 133 EE Sbjct: 156 MSEE 159 >gi|3703056|gb|AAC63021.1| UDP-galactose-4-epimerase [Lactococcus lactis] Length = 326 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRP------DIDLLKPKDFAS 44 M LV+G G + M ++ DV ++ R P + D+ AS Sbjct: 1 MTVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPANVRFYEGDVRDHAFLAS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 61 VFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F ++PI E +P P+N YG+SKL E+ + + YV LR Sbjct: 121 FGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALR 167 >gi|116749153|ref|YP_845840.1| UDP-glucose 4-epimerase [Syntrophobacter fumaroxidans MPOB] gi|116698217|gb|ABK17405.1| UDP-galactose 4-epimerase [Syntrophobacter fumaroxidans MPOB] Length = 318 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 18/154 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--------------VEIIRVGRPDI--DLLKPKDFAS 44 M LV G G I S + + E++R G P + D+ + A Sbjct: 1 MNILVTGGAGYIGSHTSKLLRKAGHTPIAFDNLSNGWAELVRFG-PFVFGDIRNEEALAR 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F D +I+ AA V+++ PE F N G A+ KA G + S+ Sbjct: 60 ALEVFKVDAVIHFAAKAYVEESTRLPEEYFDNNVGGTVALLKAMKRAGTKTLVFSSSCAT 119 Query: 105 DGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVAS 137 G +RTP I E P P N YG SKL E+ +++ Sbjct: 120 YGNARTPTIKENHPQEPTNPYGLSKLMCEQVIST 153 >gi|312863821|ref|ZP_07724059.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] gi|311101357|gb|EFQ59562.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] Length = 333 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L +DF +PDV +I+ AAY+ V ++ ++P F N G + + + G+ Sbjct: 53 LADQDFMRNVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P NP+N YG+SKL E + +Y YV LR Sbjct: 113 YIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|254443027|ref|ZP_05056503.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] gi|198257335|gb|EDY81643.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] Length = 305 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 29/263 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + L PD I+N AA + E +P + +N +A A + Sbjct: 47 LDLTDLNALEALTLEHFPDAIVNCAAISEPSACEAKPTHSRLVNVALPEKLALLARHLFA 106 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVY- 151 I+IS++ VFDG + SP +P N Y + KL E +V + LR + Sbjct: 107 TLIHISSEQVFDGTAHI-YHRDSPPSPPNEYARQKLDSELRVHELAAEFATTLRLPLLIG 165 Query: 152 -SIFGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 S G+ L L + + + D++ P A A A+++ L E +D L+G Sbjct: 166 NSPTGTRSLHERLFASWAAGQPTPLFTDEYRQPCLADNAADAMVE----LCERND--LKG 219 Query: 210 IFHMTADGGPVSWADFAEYIFWESAER-----GGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 ++ SWA +E +R G P + + P AHR A D Sbjct: 220 VY---------SWAGQKTLSRYEIGQRILKHFGLPETLIQAAQRGDDPRFAHRQARLSFD 270 Query: 265 CSKLANTHNIRISTWKEGVRNIL 287 + LA+ ++ T +G+ + L Sbjct: 271 LAPLAS----KLKTQPQGLSDQL 289 >gi|325474307|gb|EGC77495.1| UDP-glucose 4-epimerase [Treponema denticola F0402] Length = 339 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 +I L +C + +E+++ ID+ + +FF S S D +I+ AAY AV ++ ++P Sbjct: 41 KIIPVLEKICSKKLELVQ-----IDIKDKEKLFNFFKSASVDAVIHLAAYKAVGESVEKP 95 Query: 71 EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 + N G + A + I+ S+ V+ PI E SP + N YG++KL Sbjct: 96 LKYYENNISGLVNLLLAMQEHKVKNFIFSSSATVYGDAKVVPIPENSPISAANPYGRTKL 155 Query: 130 AGEE 133 EE Sbjct: 156 MSEE 159 >gi|4206182|gb|AAD11505.1| UDP-galactose-4-epimerase [Lactococcus lactis] Length = 330 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRP------DIDLLKPKDFAS 44 M LV+G G + M ++ DV ++ R P + D+ AS Sbjct: 5 MTVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPANVRFYEGDVRDHAFLAS 64 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 65 VFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSSTAAT 124 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F ++PI E +P P+N YG+SKL E+ + + YV LR Sbjct: 125 FGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALR 171 >gi|229065166|ref|ZP_04200456.1| NAD-dependent epimerase/dehydratase [Bacillus cereus AH603] gi|228716097|gb|EEL67820.1| NAD-dependent epimerase/dehydratase [Bacillus cereus AH603] Length = 307 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 8/133 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSR 109 D +I+ AA VD E +N EG I + GI ++ S+ V+ DG+S Sbjct: 60 DGVIHLAALVGVDNCRSNEEDVVRVNFEGTKNIVEVCIENGIGKLLFSSSSEVYGDGVS- 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLS-MLR 164 P E P + YGK+KL E+ + Y NN +R ++++GS NF++S L+ Sbjct: 119 VPFKENDVKIPKSAYGKAKLMSEDFLKEYANNSFKVRVVRYFNVYGSQQNDNFVISKFLK 178 Query: 165 LAKERREISVVCD 177 I++ D Sbjct: 179 QTHNGENITIYGD 191 >gi|119357786|ref|YP_912430.1| UDP-galactose 4-epimerase [Chlorobium phaeobacteroides DSM 266] gi|119355135|gb|ABL66006.1| UDP-galactose 4-epimerase [Chlorobium phaeobacteroides DSM 266] Length = 327 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+++P S ++ D ++ AA A ++ +PE+ N G I AA + G+ Sbjct: 51 DIMQPMQLRSV-MAGGFDGCVHLAALKAAGQSMQQPEMYAEANLSGTINILNAASATGLK 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 ++ S+ VF PIDE P P+N YG +KL E +A + NY LR Sbjct: 110 NIVFSSSAAVFGNPQYLPIDEEHPKEPVNFYGFTKLEIERLLAWFDQLKNINYAALR 166 >gi|116283261|gb|AAH05284.1| TGDS protein [Homo sapiens] Length = 316 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 197 >gi|125625000|ref|YP_001033483.1| GalE protein [Lactococcus lactis subsp. cremoris MG1363] gi|4995692|emb|CAB44218.1| UDP-galactose 4-epimerase [Lactococcus lactis] gi|124493808|emb|CAL98800.1| GalE protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071798|gb|ADJ61198.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. cremoris NZ9000] Length = 326 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 M LV+G G + M V DV ++ +V + D+ AS Sbjct: 1 MTVLVLGGAGYVGSHAVDMLVNRGYDVAVVDNLVTGHREAVSEKVRFYEGDVRDHAFLAS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 61 VFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F +PI E +P P+N YG+SKL E+ + + YV LR Sbjct: 121 FGIPEESPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALR 167 >gi|327537503|gb|EGF24225.1| UDP-glucose 4-epimerase [Rhodopirellula baltica WH47] Length = 328 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL S S D +++ AA+ V ++ +P I + N ++ +A + + Sbjct: 50 DLNDQAKLTSLLKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMRAADVK 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 ++ ST + PI E +P NP+N YG SKL E+ +A Y + Y A Y Sbjct: 110 KIVFSSTTATYGQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYAALRYFN 169 Query: 152 -------SIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A +RE IS+ D + TP Sbjct: 170 AAGARPDGTIGEHHDPESHLIPIVLQVALGQRESISIFGDDYPTP 214 >gi|320101335|ref|YP_004176927.1| dTDP-glucose 4,6-dehydratase [Desulfurococcus mucosus DSM 2162] gi|319753687|gb|ADV65445.1| dTDP-glucose 4,6-dehydratase [Desulfurococcus mucosus DSM 2162] Length = 336 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 1/111 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F PD I+N AA T VD++ ++P N G + + Sbjct: 58 DIANEELLSHALAEFKPDFIVNFAAETHVDRSINDPSPFIKTNVLGVYTVLEVLKKTDSI 117 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 I+ISTD V+ L E P NP + Y SK AG+ + SY Y I Sbjct: 118 YIHISTDEVYGDLWGDGEASEDWPLNPSSPYSASKAAGDLLIKSYGRTYGI 168 >gi|325284119|ref|YP_004256660.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] gi|324315928|gb|ADY27043.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] Length = 331 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-- 92 DLL P + II+ AA V ++ EP + N G+ + + + G Sbjct: 51 DLLNPDAVMQALAETQAEAIIHFAARIEVGESMREPLGYYRNNVLGSLNLLQEIQNTGRR 110 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 IP ++ ST V+ PI E +P P ++YG++KL E+ + A++ Y +LR Sbjct: 111 IPLVFSSTAAVYGTTDAVPIPEDAPLRPESVYGETKLMTEQMIRAAHAAHGQPYTVLR 168 >gi|7657641|ref|NP_055120.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|30173226|sp|O95455|TGDS_HUMAN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|5737699|gb|AAD50061.1|AF048686_1 dTDP-glucose 4,6-dehydratase like protein [Homo sapiens] gi|4128133|emb|CAA06840.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|21708081|gb|AAH33675.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|47118017|gb|AAT11156.1| growth-inhibiting protein 21 [Homo sapiens] gi|55957296|emb|CAI12084.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|55959285|emb|CAI12411.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|119629345|gb|EAX08940.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|119629346|gb|EAX08941.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|189053809|dbj|BAG36061.1| unnamed protein product [Homo sapiens] gi|325464213|gb|ADZ15877.1| TDP-glucose 4,6-dehydratase [synthetic construct] Length = 350 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 197 >gi|315606983|ref|ZP_07881989.1| NAD-dependent epimerase [Prevotella buccae ATCC 33574] gi|315251364|gb|EFU31347.1| NAD-dependent epimerase [Prevotella buccae ATCC 33574] Length = 331 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 17/172 (9%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 + +S S +QD I + ++DL P D D +++ A T ED Sbjct: 31 VRRSSSRQYLQDGRIHFI---ELDLSSPADLERRLAGMQFDYVVHAAGATKCLHEED--- 84 Query: 72 IAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLSRTP----IDEFSPTNPLNIY 124 + +N EG + A + +P +Y+S+ VF + I E P Y Sbjct: 85 -FYRVNTEGTKNLVHALLKVQMPLKRFVYLSSLSVFGAIREQQPYQEITEHDTPRPNTAY 143 Query: 125 GKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 GKSKL E + S N+ Y++LR VY ++ L M++ + + SV Sbjct: 144 GKSKLEAERFLDSIGNDFPYIVLRPTGVYGPREKDYFL-MVKSIRSHTDFSV 194 >gi|116512904|ref|YP_811811.1| UDP-galactose 4-epimerase [Lactococcus lactis subsp. cremoris SK11] gi|116108558|gb|ABJ73698.1| UDP-galactose 4-epimerase [Lactococcus lactis subsp. cremoris SK11] Length = 326 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 M LV+G G + M V DV ++ +V + D+ AS Sbjct: 1 MTVLVLGGAGYVGSHAVDMLVNRGYDVAVVDNLVTGHREAVSEKVRFYEGDVRDHAFLAS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 61 VFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F +PI E +P P+N YG+SKL E+ + + YV LR Sbjct: 121 FGIPEESPISEKTPQKPINPYGESKLIMEKMMKWQSKATDMTYVALR 167 >gi|84515101|ref|ZP_01002464.1| UDP-glucose 4-epimerase [Loktanella vestfoldensis SKA53] gi|84511260|gb|EAQ07714.1| UDP-glucose 4-epimerase [Loktanella vestfoldensis SKA53] Length = 338 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 F P +++ A AV +++ +P + +N G A+ A D G I+ S+ V+ Sbjct: 72 FVPQAVVHFAGLKAVGESQQKPLAYYDVNVGGTLALLHAMDRAGCRRIIFSSSATVYGEP 131 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEE 133 P DE PT P ++YG++KL E+ Sbjct: 132 DYLPYDEAHPTRPTSVYGRTKLMAEQ 157 >gi|307564819|ref|ZP_07627347.1| NAD-binding protein [Prevotella amnii CRIS 21A-A] gi|307346541|gb|EFN91850.1| NAD-binding protein [Prevotella amnii CRIS 21A-A] Length = 332 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 10/96 (10%) Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL-SRTPIDEFSPTN- 119 K +D+ + + INAEG KA S+ +P ++IS+ +F + + P E + T+ Sbjct: 79 KCQDKNDF-YRINAEGTAHFIKAIRSVKMPIEKFVFISSLSIFGAIKQQQPYAEITDTDI 137 Query: 120 --PLNIYGKSKLAGEEKVASYTNN--YVILRTAWVY 151 P YGKSKLA EE + Y YVILR VY Sbjct: 138 PEPNTYYGKSKLAAEELLKEYAGTIPYVILRPTGVY 173 >gi|308807725|ref|XP_003081173.1| putative UDP-glucose 4-epimerase (ISS) [Ostreococcus tauri] gi|116059635|emb|CAL55342.1| putative UDP-glucose 4-epimerase (ISS) [Ostreococcus tauri] Length = 430 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L GN G IA + D RV D+ ++ ++A + DV+ + AA Sbjct: 115 MDNLSRGNGGAIAALKRTA---DEGSFRVVEGDLGRVEDIEWAFTGSNLGVDVVFHFAAI 171 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V ++ +P + + + D+ G+ IY ST + + + PI E +PT Sbjct: 172 AYVGESMADPLRYYRNITVNTVNLLRVMDAHGVNNMIYSSTCATYGNVEKLPITESTPTK 231 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWV--YSIFGS--NFLLSMLRLA--KERREIS 173 P+N YGKSKL E + Y +TA + +++FGS + +L L A +E IS Sbjct: 232 PINPYGKSKLYAENVIKDYALANPKFKTAILRYFNVFGSDPDGVLGELPRAELREHGRIS 291 Query: 174 VVC 176 C Sbjct: 292 GAC 294 >gi|114650309|ref|XP_522697.2| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Pan troglodytes] Length = 350 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVHAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 197 >gi|13476535|ref|NP_108105.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] gi|14027296|dbj|BAB54250.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] Length = 343 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 2/142 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD-FASFFLSFSPDVIINPAAYT 61 C ++ G + + ++C + + + G + ++ +D + ++ P +I+ AA Sbjct: 20 CKLLAAAGYLPVAFDNLCRGNRKSVAWGPLVVGDIRDRDALRAAIGTYRPISVIHFAALA 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ EP +S N G A+ AA + I I S+ G+ P+ E S NP Sbjct: 80 YVGESVQEPADYYSTNVTGTIAVLDAARAHAIDNIIFSSSCATYGVPEALPVRETSLQNP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNY 142 ++ YG++KL GE+ + Y + Y Sbjct: 140 ISPYGRTKLMGEQIIGDYASAY 161 >gi|158317410|ref|YP_001509918.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158112815|gb|ABW15012.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 329 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 10/133 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS---- 90 DLL+P+ A+ +S D + + AA T V ++ + P F+ N G + A D+ Sbjct: 50 DLLEPRQLAAAGVSRGFDGVCHLAALTRVRESRETPLRYFAANVTGTTNLLAALDAGTRA 109 Query: 91 --IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVI 144 + ++ S+ V+ +PI E P N YG SKLA E+ VA V+ Sbjct: 110 TGVAPRFVFGSSCAVYGDTGTSPIPETRAPAPTNPYGASKLAAEQAVAYQAATGRLGAVV 169 Query: 145 LRTAWVYSIFGSN 157 LR+ V GS+ Sbjct: 170 LRSFNVAGAVGSH 182 >gi|307718106|ref|YP_003873638.1| UDP-glucose 4-epimerase [Spirochaeta thermophila DSM 6192] gi|306531831|gb|ADN01365.1| UDP-glucose 4-epimerase [Spirochaeta thermophila DSM 6192] Length = 324 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 9/125 (7%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 +RVG DL + LSF PDV+++ AA+ V + + P F N G + + Sbjct: 46 LRVG----DLHDTETLREVLLSFKPDVVMHFAAFIEVGISTERPLEFFENNTVGTIRLVQ 101 Query: 87 AADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----N 141 G+ I+ ST V+ + PI E + P+N YG SK+ EE + S + Sbjct: 102 TMMHTGVHHFIFSSTAAVYGHPEKIPIPEDARLTPVNPYGSSKVMVEEFLRSLSEWSPFR 161 Query: 142 YVILR 146 YV +R Sbjct: 162 YVAIR 166 >gi|155372043|ref|NP_001094629.1| dTDP-D-glucose 4,6-dehydratase [Bos taurus] gi|182701397|sp|A6QLW2|TGDS_BOVIN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|151553768|gb|AAI48107.1| TGDS protein [Bos taurus] gi|296481682|gb|DAA23797.1| TDP-glucose 4,6-dehydratase [Bos taurus] Length = 355 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVY 197 >gi|303249101|ref|ZP_07335343.1| UDP-glucose 4-epimerase [Desulfovibrio fructosovorans JJ] gi|302489516|gb|EFL49460.1| UDP-glucose 4-epimerase [Desulfovibrio fructosovorans JJ] Length = 334 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + F + P +++ AA+ V ++ +PE + N G+ ++ A G Sbjct: 52 DILNKGELDEVFAEYKPAAVLHFAAFAYVGESVADPEKYYRNNVAGSLSLLSAMRRAGCK 111 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I + ST + R P+ E P PL+ YG SKL E+ + + Y + TA Y Sbjct: 112 HIVFSSTCATYGAPERVPLTEDHPLRPLSPYGTSKLMIEQMLRDFDAAYGMTYTALRY 169 >gi|288925878|ref|ZP_06419808.1| NAD dependent epimerase/reductase-related protein [Prevotella buccae D17] gi|288337302|gb|EFC75658.1| NAD dependent epimerase/reductase-related protein [Prevotella buccae D17] Length = 331 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 17/172 (9%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 + +S S +QD I + ++DL P D D +++ A T ED Sbjct: 31 VRRSSSRQYLQDGRIHFI---ELDLSSPADLERRLAGMQFDYVVHAAGATKCLHEED--- 84 Query: 72 IAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLSRT----PIDEFSPTNPLNIY 124 + +N EG + A + +P +Y+S+ VF + I E P Y Sbjct: 85 -FYRVNTEGTKNLVHALLKVQMPLKRFVYLSSLSVFGAIREQQPYQEITEHDTPRPNTAY 143 Query: 125 GKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 GKSKL E + S N+ Y++LR VY ++ L M++ + + SV Sbjct: 144 GKSKLEAERFLDSIGNDFPYIVLRPTGVYGPREKDYFL-MVKSIRSHTDFSV 194 >gi|239629916|ref|ZP_04672947.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527528|gb|EEQ66529.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 322 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A + D I+N AA + VD++ PEI N +G A+ A I + ISTD Sbjct: 45 AYLIEQYHIDAIVNFAAESHVDRSILHPEIFVETNVKGTLALLHEAHRHDIKLLQISTDE 104 Query: 103 VFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L T E SP P + Y SK + + V SY Y Sbjct: 105 VYGSLGSTGYFTENSPLQPNSPYAASKASADMLVRSYFETY 145 >gi|158318296|ref|YP_001510804.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158113701|gb|ABW15898.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 349 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 32/178 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ LV G++G I L V +R D+ L F+ L PD + Sbjct: 1 MRILVTGHDGYIGTRL-------VPFLRQAGHDVAGLDSMLFSDCTLGTEPDSVPALALD 53 Query: 55 ---INPAAYTAVDK------------AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 + P+ D + P + INA G I AA G+P ++ Sbjct: 54 IRDVRPSHLEGFDAVIHLAGISNDPLGDLNPRTTYDINARGTLMIGSAARQAGVPRFVFS 113 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 S+ ++ PIDE + +P+ YG+SK+ E ++ + ++ V LR A Y + Sbjct: 114 SSCSLYGAHGDAPIDESAEFHPVTPYGESKVIAERELTALADDGFSPVFLRNATAYGV 171 >gi|15897730|ref|NP_342335.1| dTDP-glucose 4,6-dehydratase (rfbB-1) [Sulfolobus solfataricus P2] gi|6015647|emb|CAB57474.1| dTDP-glucose 4,6-dehydratase (rfbB) [Sulfolobus solfataricus P2] gi|13814011|gb|AAK41125.1| dTDP-Glucose 4,6-dehydratase (rfbB-1) [Sulfolobus solfataricus P2] Length = 317 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +SPD++IN AA T VD++ +P+ + N G + +A+ ++ISTD V+ Sbjct: 65 EYSPDIVINFAAETHVDRSIYKPQDFVTTNVLGTVNLLEASRKFNFKYVHISTDEVY--- 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 DE SP P + Y SK + + V +Y Y I Sbjct: 122 GEECGDENSPLKPSSPYSASKASADLFVKAYVRTYGI 158 >gi|108758472|ref|YP_631928.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus xanthus DK 1622] gi|108462352|gb|ABF87537.1| oxidoreductase, short chain dehydrogenase/reductase family [Myxococcus xanthus DK 1622] Length = 333 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 69 EPEIAFSINAEGAGAIAKAADSIGIP--CIYIST-DYVFDGLSRTPIDEFSPTNPLNIYG 125 EPE NA+G + +A ++ P +Y S+ P E P P++IYG Sbjct: 79 EPEGYIEGNAKGTRRLVEAMAALPHPPRLVYCSSLAAAGPSTPERPRREEDPPAPVSIYG 138 Query: 126 KSKLAGEEKVASYTNNY--VILRTAWVYSIFGSNFLLSMLRLAK 167 +SKL GEE V ++ + VI+R VY FL S+L +AK Sbjct: 139 RSKLGGEEAVRAFADRVPSVIVRPPIVYGPGDVEFLPSLLPMAK 182 >gi|310643735|ref|YP_003948493.1| nad dependent epimerase/dehydratase [Paenibacillus polymyxa SC2] gi|309248685|gb|ADO58252.1| NAD dependent epimerase/dehydratase [Paenibacillus polymyxa SC2] Length = 284 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 25/155 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFL----------- 47 MK L++G NG L GR ++ P++ L Sbjct: 1 MKLLILGGNGMAGHVLVDYFQNQ------GRHNVFYTTRDPENKGGLLLDVRDSFMVEQL 54 Query: 48 --SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 S PDVIIN ED+ A+ IN + + ADSIG I+ISTD VF+ Sbjct: 55 VRSVRPDVIINAVGVLNQYAGEDQI-TAYQINGLLPHLLRRTADSIGARLIHISTDCVFE 113 Query: 106 GLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASY 138 G R P E + + Y +K+ GE K A + Sbjct: 114 G-KRAPGLYKETDQPDGTSAYAVTKILGEVKAAGH 147 >gi|332971740|gb|EGK10688.1| UDP-glucose 4-epimerase [Desmospora sp. 8437] Length = 328 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 20/173 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVG-----RPDIDL----LKPKDFASF 45 MK LV G G I + ++ V+ + G RPD+ ++ + Sbjct: 25 MKVLVTGGAGFIGSHIVDQLLEKGHQAVVVDNLSTGEEEYLRPDLPFYRMDIQDEGIDRV 84 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PD +I+ AA + V ++ ++P N G + ++ G+ IY S+ ++ Sbjct: 85 IGEEQPDAVIHQAAQSQVTRSIEDPLGDARTNILGTIRLLESCRRHGVAKIIYASSAAIY 144 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 PIDE P +PL+ YG SK EE + +Y + ++ I R A VY I Sbjct: 145 GNPQYLPIDEQHPLSPLSPYGISKGTPEEYIRAYHSLHGLSFTIFRYANVYGI 197 >gi|170758224|ref|YP_001787997.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169405213|gb|ACA53624.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 305 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +GN+ I +LS+ + ++ + R I+ + + ++ F D++ + AA Sbjct: 19 KLISMGNDVCIIDNLSTGNINNIN--KKARLYINDILDSNISNIFKKEKFDIVYHFAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ +P ++N G I K+ G+ IY S+ ++ PIDE P Sbjct: 77 DVQKSIKDPMFDSNVNICGTVNILKSCVDYGVKKIIYPSSAAIYGQPEYLPIDEKHRVKP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + S++ +Y I R A VY I Sbjct: 137 ISSYGLSKYTPEEYIRSFSELYNLDYTIFRYANVYGI 173 >gi|283852851|ref|ZP_06370113.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] gi|283571761|gb|EFC19759.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] Length = 337 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L F + P +++ AA+ V ++ +PE + N G+ ++ A G Sbjct: 52 DILSRGSLDEVFAEYKPAAVLHFAAFAYVGESVTDPEKYYRNNVAGSLSLLSAMRKSGCK 111 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I + ST + R P+ E PT P++ YG +KL E+ + + Y I TA Y Sbjct: 112 HIVFSSTCATYGAPERVPLTEDHPTRPMSPYGTTKLMIEQMLKDFEAAYGIGYTALRY 169 >gi|23016840|ref|ZP_00056592.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 292 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 11/156 (7%) Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D +P+++ +N + + +GI I+ ST++VFDG+ + E P+ + Sbjct: 70 DSCVKDPQVSHRLNVVAMTRLVEDLWGLGITPIFASTEFVFDGVKGDYV-ETDEARPILL 128 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLRLAKERREISVVCDQFG 180 YG+ K E+ + + + ILR A VY G+ F + + + DQ Sbjct: 129 YGRQKKEVEDFLLASGKPHAILRFAKVYGTEPGDGTLFSAWIAQALGGATAMRCAADQVF 188 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 +P + AI+++A + L GI+H++ + Sbjct: 189 SPVHVGDVGEAILRVA-------ERDLGGIYHLSGN 217 >gi|149634948|ref|XP_001512139.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 406 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 143 DIVLHFAAQTHVDLSFVRTLEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDQ 202 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 203 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 247 >gi|78183669|ref|YP_376103.1| dTDP-4-dehydrorhamnose reductase-like [Synechococcus sp. CC9902] gi|78167963|gb|ABB25060.1| dTDP-4-dehydrorhamnose reductase-like [Synechococcus sp. CC9902] Length = 288 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 13/220 (5%) Query: 4 LVIGNNGQIAQS-LSSMCVQDVEIIRVGRP-----DIDLLKP-KDFASFFLSFSPDVIIN 56 LVIG+ G + S + + + ++ + R IDLL + + +IN Sbjct: 3 LVIGSTGMLGSSYVRHLSLNNIPYHTISRNIGSSYCIDLLHSFAEIEKLIIDNKYSAVIN 62 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA ++D E P +A +N++ +A + +G ++ISTD+ F G E Sbjct: 63 CAAIVSLDYCERFPSLAMRVNSDLVLCLASICEKVGSILMHISTDHFFSGDGNYLHPEDH 122 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P N Y SK GE + N V+ Y S+ + L + E ++ Sbjct: 123 PIVINNNYAYSKHLGELNALKFPNTIVLRTNVTGYRNGSSSTFIEWLLFSLMNNEPIILF 182 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 D F T T HN + + RG+ +++++ Sbjct: 183 DDFFTSTIDADC------FVHNSLLLLECEFRGLLNLSSN 216 >gi|325695356|gb|EGD37256.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK150] Length = 286 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I QS V E ++V D+ ++ K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGQSFKK-YVSSREDVQVDELDVRGEVWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A S G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKSEGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 EERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|294494801|ref|YP_003541294.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] gi|292665800|gb|ADE35649.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] Length = 303 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+I+ AA V+++ ++P N G + +AA + IY S+ ++ + Sbjct: 65 DVVIHTAAQIDVNRSMEQPMFDCENNILGTLNLLEAARQTNLKRFIYFSSAAIYGETLQM 124 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 P+ E PT PL+ YG SKL GE+ Y + +LR +YS Sbjct: 125 PVSENHPTQPLSPYGVSKLTGEQYALMYHRAFNLPISVLRPFNIYS 170 >gi|297539427|ref|YP_003675196.1| UDP-glucose 4-epimerase [Methylotenera sp. 301] gi|297258774|gb|ADI30619.1| UDP-glucose 4-epimerase [Methylotenera sp. 301] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 16/158 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK LV+G G I + M + + + + G D DL Sbjct: 1 MKILVVGGAGYIGSHMVKMLLDEGHKVVTFDNLSSGFRDAVLGGDFVEGDLANTAMLDDV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F + P+ +++ A+Y V ++ P + N + + I+ ST VF Sbjct: 61 FTKYKPEAVMHFASYIQVGESVQHPAKYYFNNFTNTLNLLNTMVKHQVNSFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P PLN YG+SKL E+ +A Y + Y Sbjct: 121 GEPEYVPIDEAHPKAPLNPYGRSKLMVEQILADYEHAY 158 >gi|297694274|ref|XP_002824410.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Pongo abelii] Length = 350 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|32474159|ref|NP_867153.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] gi|32444696|emb|CAD74698.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] Length = 405 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL S S D +++ AA+ V ++ +P I + N ++ +A + + Sbjct: 83 DLNDQAKLTSLLKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMRAADVK 142 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-- 151 ++ ST + PI E +P NP+N YG SKL E+ +A Y + Y A Y Sbjct: 143 KIVFSSTTATYGQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYAALRYFN 202 Query: 152 -------SIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A +RE IS+ D + TP Sbjct: 203 AAGARPDGTIGEHHDPESHLIPIVLQVALGQRESISIFGDDYPTP 247 >gi|115525507|ref|YP_782418.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] gi|115519454|gb|ABJ07438.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris BisA53] Length = 317 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 18/152 (11%) Query: 1 MKCLVIGNNGQIAQSL-----SSMCVQDVEIIRVG----------RPDIDLLKPKDFASF 45 MK LV G NG + + L S V V+ +R G R D+ D + Sbjct: 1 MKILVTGGNGYVGRELCRQLYDSHRVLVVDELRYGANRFCEDDLARLDLIQADVSDVRAM 60 Query: 46 --FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F+PDV+I+ AA + + E P +A S N G A+ +A G ++ S+ V Sbjct: 61 AAVREFAPDVVIHLAAIHYIPECETNPALAVSTNVAGTVAMLQACPP-GCRFVFASSGAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + + + + T P +IYG SKL GE V Sbjct: 120 YAPDASPHSETEAATVPTDIYGLSKLQGEHYV 151 >gi|317482611|ref|ZP_07941626.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium sp. 12_1_47BFAA] gi|316916033|gb|EFV37440.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium sp. 12_1_47BFAA] Length = 362 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 18/179 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + + D P + + S IIN Sbjct: 191 RTLVTGCNGQLGRAVRAYAEAHGLRGFEYTDID--EFDFSDPAAYDEYDWSLY-GTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 +A DK E + A++INA+G +++AA + ++ STD V+ S E Sbjct: 248 EELSA-DKCEIGENHARAWTINAQGPALLSRAAKDHHVTLVHASTDKVYGADS-----EA 301 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P ++YG++K AG+ VA+ +Y++ R+ S N + ++ +L E V Sbjct: 302 KAIAPESVYGQTKAAGDIAVANAPEHYILRRSE---SADSRNIVDTLFQLLDSHAEYGV 357 >gi|229008630|ref|ZP_04166042.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] gi|228752635|gb|EEM02251.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] Length = 304 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 22/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 MK LV G G I + ++ D ++ +V D+ P + Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDP-NIDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A + IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 + PIDE NP++ YG SKL E + + Y ILR + VY Sbjct: 120 YGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVY 171 >gi|119490781|ref|ZP_01623113.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] gi|119453765|gb|EAW34923.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] Length = 397 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F D +++ AA +V ++ P + N + + + G+ Sbjct: 47 DLEDKQKLDQVFAEHQFDAVLHFAASISVPESTANPLAYYGNNTRNTLNLLQCCEKYGVK 106 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 ++ ST V+ P+ E +PT P+N YG SKL E+ + Y+ YVILR Sbjct: 107 KLVFSSTAAVYGETVENPVRESTPTAPINPYGYSKLMSEQMIKDYSQASGLKYVILR 163 >gi|21225473|ref|NP_631252.1| polysaccharide biosynthesis protein [Streptomyces coelicolor A3(2)] gi|9716233|emb|CAC01594.1| putative polysaccharide biosynthesis protein [Streptomyces coelicolor A3(2)] Length = 271 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 23/194 (11%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLS 48 M LV+G +G + L +S V RP ++DL S Sbjct: 1 MTVLVVGGSGFLGTELVRQASAAGHRVAATFATRPCDGPEATWHEVDLRDGARVEEVVAS 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P V+IN ++ +A +++ AEG+ +A A +++S+D VF G S Sbjct: 61 LAPCVVINASSGSA----------DWAVTAEGSVRLAMTAVKYDCRLVHVSSDAVFSG-S 109 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K A E + VI RT+ + S + + LA Sbjct: 110 RVHYDESCLPDPVTPYGAAKAAAETGIRLLAPAAVIARTSLIIGGIQSEHVRLVHDLATG 169 Query: 169 RREISVVCDQFGTP 182 R ++ D P Sbjct: 170 SRTGALFTDDVRCP 183 >gi|328950264|ref|YP_004367599.1| NAD-dependent epimerase/dehydratase [Marinithermus hydrothermalis DSM 14884] gi|328450588|gb|AEB11489.1| NAD-dependent epimerase/dehydratase [Marinithermus hydrothermalis DSM 14884] Length = 351 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 109/290 (37%), Gaps = 60/290 (20%) Query: 1 MKCLVIGNNGQIAQSLSSM------------------CVQDVEIIRVG--RPDIDLLKPK 40 M+ LV G++G I L M C E V R D+ + P+ Sbjct: 1 MRVLVTGHHGYIGSVLVPMLQAAGHEVVGLDAYYFEGCTLGEEPPEVPALRLDVRDVTPE 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 F D +I+ AA + + PE + +N E +A+ A G+P +Y S Sbjct: 61 HLEGF------DAVIHLAALSNDPLGDLRPECTYQVNYEATAHLARCAKQAGVPRFLYSS 114 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYS---- 152 + ++ + E +P P+ YG SK+ E+ ++A T + LR A Y Sbjct: 115 SCSLYGASDDGFLTEEAPFRPVTPYGHSKILAEQALARLADETFSPTYLRNATAYGASPR 174 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL----QIARAIIQIAHNLIE------- 201 + G + +++ A E+ + D GTP L IARA + + H E Sbjct: 175 LRGDLVVNNLVGYAVTTGEVLIKSD--GTPWRPLVHVEDIARAFLAVLHAPRERVHNEAF 232 Query: 202 -----NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI 246 + +R + + P S F AE GP + YR+ Sbjct: 233 NVGRTEENYQIREVAEIVQQAVPGSRVRF--------AEGAGPDKRNYRV 274 >gi|320105124|ref|YP_004180715.1| UDP-galactose 4-epimerase [Isosphaera pallida ATCC 43644] gi|319752406|gb|ADV64166.1| UDP-galactose 4-epimerase [Isosphaera pallida ATCC 43644] Length = 331 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 8/106 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD---YVFDGLS 108 D +++ AA +V + +P + +N G ++ +A + G+ + S+ Y F G Sbjct: 69 DAVMHFAALASVPDSISDPSNYYRVNVLGTYSLLEAMRAAGVKKLVFSSTAATYGFHGPE 128 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 P+ E + NP YG +K AGE +A Y Y W Y+IF Sbjct: 129 AMPLQETAAKNPETPYGTTKRAGEWMIADYARAY-----GWGYAIF 169 >gi|228994844|ref|ZP_04154641.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228764891|gb|EEM13648.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 304 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 22/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 MK LV G G I + ++ D ++ +V D+ P + Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDP-NIDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A + IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 + PIDE NP++ YG SKL E + + Y ILR + VY Sbjct: 120 YGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVY 171 >gi|296876271|ref|ZP_06900324.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] gi|296432776|gb|EFH18570.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] Length = 359 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + G+ I S+ G+ Sbjct: 97 DAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYIVFSSTAATYGIPEEI 156 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P NP+N YG+SKL E + +Y YV LR +++ G Sbjct: 157 PILETTPQNPINPYGESKLMMETIMRWADQAYGIKYVPLR---YFNVAGAKPDGSIGEDH 213 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ +RE IS+ D + TP Sbjct: 214 GPETHLLPIVLQVAQGKREKISIFGDDYQTP 244 >gi|332216591|ref|XP_003257436.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Nomascus leucogenys] Length = 350 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|289163579|ref|YP_003453717.1| dTDP-4-dehydrorhamnose reductase [Legionella longbeachae NSW150] gi|288856752|emb|CBJ10563.1| putative dTDP-4-dehydrorhamnose reductase [Legionella longbeachae NSW150] Length = 292 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 7/161 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D D+L P+V+IN + +P A +NA +A+ G Sbjct: 53 DTDVLNLDALCKVLEQVRPNVVINCVGLIKQLSSAKDPLSALPVNAMLPHQLARLCQLAG 112 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I+ISTD VF G + E ++ ++YGKSK GE + ++N + LRT+ + Sbjct: 113 ARLIHISTDCVFSG-KKGFYTENDNSDAEDLYGKSKFIGE---ITESSNAITLRTSIIGH 168 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQF-GTPTSALQIARAI 192 F S L L++E V F G PT ++AR + Sbjct: 169 EFNSKSALVEWFLSQELSVKGYVNAIFSGLPT--FELARVM 207 >gi|171778819|ref|ZP_02919881.1| hypothetical protein STRINF_00740 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282465|gb|EDT47889.1| hypothetical protein STRINF_00740 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 332 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 36/221 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + ++ V+ + G PD L +DF Sbjct: 1 MSILVLGGAGYIGSHMVDRLIEKGEEKVVVVDSLVTGHRAAVHPDATFYQGDLADQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + +PD+ +I+ AAY+ V ++ ++P F N G + + + G+ I S+ Sbjct: 61 KVFTENPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMIKLLEVMNEFGVKYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-L 160 G+ PI E +P P+N YG+SKL E I++ W +G F+ L Sbjct: 121 ATYGIPDELPIKETTPQRPINPYGESKLMME----------TIMK--WSDQAYGIKFVPL 168 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +A + + S+ D G T L I I+Q+A + E Sbjct: 169 RYFNVAGAKPDGSIGEDH-GPETHLLPI---ILQVAQGVRE 205 >gi|134094377|ref|YP_001099452.1| putative dTDP-4-dehydrorhamnose reductase [Herminiimonas arsenicoxydans] gi|133738280|emb|CAL61325.1| putative dTDP-4-dehydrorhamnose reductase [Herminiimonas arsenicoxydans] Length = 284 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 48/256 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--------VEIIRVGR-----------PDIDLLKPKD 41 MK LV+G +G + ++ + + V GR P D+ Sbjct: 1 MKILVLGASGMLGSAVMRVLSEKKDWQLFGTVRSANAGRFFSPQIAECLLPGCDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F P V+IN D+P +A IN+ +A + G I+ISTD Sbjct: 61 LVKVFDRVKPTVVINCIGLVKQLADADDPLLALPINSLLPHRLAALCNLSGARLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-YSIFGSNFLL 160 VF G + +E ++ ++YGKSK GE + + LRT+ + + + ++ L+ Sbjct: 121 CVFKG-DKGAYEEKDISDATDLYGKSKFLGEVSLP----QTLTLRTSIIGHELQNAHGLV 175 Query: 161 SMLRLAKERREISVVCDQF------GTPTSAL-QIARAIIQIAHNLIENSDTSLRGIFHM 213 K+R C+ + G PT AL Q R ++ I +D S G++H+ Sbjct: 176 EWFLEQKDR------CNGYKRSIFSGLPTVALAQFIRDVV------IPRADLS--GLYHV 221 Query: 214 TADGGPVSWADFAEYI 229 A P+S D I Sbjct: 222 AAK--PISKFDLLALI 235 >gi|109121066|ref|XP_001083495.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Macaca mulatta] gi|90083092|dbj|BAE90628.1| unnamed protein product [Macaca fascicularis] Length = 350 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|296188834|ref|XP_002742523.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Callithrix jacchus] Length = 350 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|115380334|ref|ZP_01467339.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|310821283|ref|YP_003953641.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|115362664|gb|EAU61894.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] gi|309394355|gb|ADO71814.1| UDP-glucose 4-epimerase [Stigmatella aurantiaca DW4/3-1] Length = 314 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 73/179 (40%), Gaps = 33/179 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL----------LKPK---------- 40 MK LV G G I +S E +R G I L L PK Sbjct: 1 MKVLVTGGAGFIGSHVSD------EFLRAGHEVIALDNMSSGKRENLDPKVRLVELDIRS 54 Query: 41 -DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 + A+ S P VI + AA V ++ ++P N G + +AA + G+ I+ Sbjct: 55 PEAAALIRSERPQVICHLAAQMDVRRSVEDPRFDADANILGMLNLLEAARASGVKKVIFS 114 Query: 99 STDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYS 152 ST G P E PT P++ YG SK AGE + A Y +YV LR A VY Sbjct: 115 STGGAIYGEQDVFPAPESHPTRPVSPYGVSKAAGELYLGYYRAQYGLSYVALRYANVYG 173 >gi|87300564|ref|ZP_01083406.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 5701] gi|87284435|gb|EAQ76387.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 5701] Length = 339 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL A F S P +I+ AA V + + P N G G I + G+ Sbjct: 64 LDLEDGSAMAELFESERPRAVIHLAAQAGVRYSIENPSAYIHSNLVGFGNILEGCRHHGV 123 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 +Y S+ V+ G R P E P N P+++Y +K A E +Y++ Y + LR Sbjct: 124 EHLVYASSSSVYGGNRRMPFSEQHPVNHPVSLYAATKKANELMAHTYSHLYGLPATGLRF 183 Query: 148 AWVYSIFGSNFLLSML 163 VY +G + ML Sbjct: 184 FTVYGPWGRPDMAPML 199 >gi|21233125|ref|NP_639042.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770065|ref|YP_244827.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. campestris str. 8004] gi|21115543|gb|AAM43468.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575397|gb|AAY50807.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. campestris str. 8004] Length = 383 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ P + A + +I+ AA AV ++ EP F+ N G A+ +A S G+ Sbjct: 57 MDVRAP-ELAELMQRERIEAVIHFAALKAVGESVREPLRYFNNNVTGTLALLRAMRSAGV 115 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ + +PI+E +P +N YG++KL EE + + Sbjct: 116 ANLVFSSSATVYGDENSSPIEEHAPLKAINPYGRTKLMMEEMIGDLS 162 >gi|319784411|ref|YP_004143887.1| UDP-glucose 4-epimerase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170299|gb|ADV13837.1| UDP-glucose 4-epimerase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 359 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P +I+ AA V ++ EP +S N G A+ AA + I I S+ G+ Sbjct: 66 THRPTAVIHFAALAYVGESVREPAEYYSTNVTGTIAVLDAARASSIENIIFSSSCATYGV 125 Query: 108 SRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P+ E S NP++ YG++KL GE+ + Y + Y Sbjct: 126 PEALPVRETSSQNPISPYGRTKLMGEQIIGDYASAY 161 >gi|270158162|ref|ZP_06186819.1| putative dTDP-4-dehydrorhamnose reductase [Legionella longbeachae D-4968] gi|269990187|gb|EEZ96441.1| putative dTDP-4-dehydrorhamnose reductase [Legionella longbeachae D-4968] Length = 282 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 7/161 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D D+L P+V+IN + +P A +NA +A+ G Sbjct: 43 DTDVLNLDALCKVLEQVRPNVVINCVGLIKQLSSAKDPLSALPVNAMLPHQLARLCQLAG 102 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I+ISTD VF G + E ++ ++YGKSK GE + ++N + LRT+ + Sbjct: 103 ARLIHISTDCVFSG-KKGFYTENDNSDAEDLYGKSKFIGE---ITESSNAITLRTSIIGH 158 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQF-GTPTSALQIARAI 192 F S L L++E V F G PT ++AR + Sbjct: 159 EFNSKSALVEWFLSQELSVKGYVNAIFSGLPT--FELARVM 197 >gi|325964602|ref|YP_004242508.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter phenanthrenivorans Sphe3] gi|323470689|gb|ADX74374.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter phenanthrenivorans Sphe3] Length = 321 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 31/180 (17%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDI--------------DLLKPKDFASFF 46 + V G +G++ +S+ + + + +I V R + DLL P + Sbjct: 3 RIFVTGGSGRLGRSVVAGLAEKGHHVISVDRDAVPADQLPAGVVQETADLLAPGEALRLL 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +PD +I+ AA A ++ + F+ N A A+ AA +G+ I ++ G Sbjct: 63 RDTTPDAVIHLAAIAVPFSAPED--VIFATNTRLAFAVISAATEVGVQKIVTASSPTVLG 120 Query: 107 LSRT--------PIDEFSPTNPLNIYGKSKLAGEEKVASYTN------NYVILRTAWVYS 152 P+DE +P P N Y SKL E+ V ++ N Y R +V S Sbjct: 121 YGSPAGWLPPSFPLDERTPPKPWNAYALSKLIAEQTVQAFANAQGEKIRYAAFRPCYVIS 180 >gi|116495515|ref|YP_807249.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] gi|116105665|gb|ABJ70807.1| dTDP-glucose 4,6-dehydratase [Lactobacillus casei ATCC 334] Length = 324 Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A + D I+N AA + VD++ PEI N +G A+ A I + ISTD Sbjct: 65 AYLIEQYHIDAIVNFAAESHVDRSILHPEIFVETNVKGTLALLHEAHRHDIKLLQISTDE 124 Query: 103 VFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L T E SP P + Y SK + + V SY Y Sbjct: 125 VYGSLGPTGYFTEDSPLQPNSPYAASKASADMLVRSYFETY 165 >gi|302540523|ref|ZP_07292865.1| putative polysaccharide biosynthesis protein [Streptomyces hygroscopicus ATCC 53653] gi|302458141|gb|EFL21234.1| putative polysaccharide biosynthesis protein [Streptomyces himastatinicus ATCC 53653] Length = 275 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 11/117 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P+ + P +++N A A D +++ AEG +A AA G Sbjct: 46 LDLRDPERIEAVVAEVGPLLVVN-----ATSSASD-----WAVTAEGPVHLAMAAAKSGC 95 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +++S+D VF G +R DE +P+ YG +K A E V V+ RT+ + Sbjct: 96 RLVHVSSDAVFSG-ARVHYDESCLPDPVTPYGAAKAAAETGVRLVHPEAVVARTSLI 151 >gi|46487625|gb|AAS99166.1| DmhB [Escherichia coli] Length = 277 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 10/155 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL---LKPKDFASFFLSF-SPDVIINP 57 K ++G+ G + L S ++ VGR + D+ L+ +F + D II Sbjct: 3 KVFILGSTGYVGNHLKSFLSDAFSLVTVGRKNSDIHFDLETGEFNDLLDQVNNDDTIIFL 62 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 +A +A D+ E ++A IN + + I+ S+D VF G S E S Sbjct: 63 SAVSAPDQCEKNYDVAHKINVKNTITLISELLKKNARVIFSSSDVVFGGTSDV-CTEMSE 121 Query: 118 TNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWV 150 P YG+ K EE ++NN + ++R +++ Sbjct: 122 RKPFGKYGQMKCEVEEH---FSNNPGFFVIRFSYI 153 >gi|197124795|ref|YP_002136746.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] gi|196174644|gb|ACG75617.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. K] Length = 334 Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%) Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTA 148 G+ ++ S+ V+DG T D+ +P P YG++KLA EE + S Y ILR Sbjct: 118 GVKLVFASSVAVYDGGEGTATDDTAPA-PRTPYGQTKLAAEEAIRSEGERGLRYTILRFP 176 Query: 149 WVYSIFGSNFLLSMLRLAKERREISV 174 +Y G + MLR RR + + Sbjct: 177 LLYGPHGRGNMERMLRAIGRRRYVPI 202 >gi|88802451|ref|ZP_01117978.1| dTDP-4-dehydrorhamnose reductase RfbD-2 [Polaribacter irgensii 23-P] gi|88781309|gb|EAR12487.1| dTDP-4-dehydrorhamnose reductase RfbD-2 [Polaribacter irgensii 23-P] Length = 89 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 5/90 (5%) Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 + + ++ + I I+ISTD++FDG + E NP+N YG SKL E + + Sbjct: 1 MTEISEQLNIHVIHISTDFIFDG-KKGNYKETDIPNPVNYYGASKLNFEAILTASAIQNT 59 Query: 144 ILRTAWVY----SIFGSNFLLSMLRLAKER 169 ILRT VY + SN +L + ++ +E+ Sbjct: 60 ILRTTLVYGKVPQVTNSNIVLWVKKMLEEK 89 >gi|254483408|ref|ZP_05096637.1| RmlD substrate binding domain superfamily protein [marine gamma proteobacterium HTCC2148] gi|214036282|gb|EEB76960.1| RmlD substrate binding domain superfamily protein [marine gamma proteobacterium HTCC2148] Length = 287 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 60/288 (20%), Positives = 121/288 (42%), Gaps = 18/288 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV---EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ LVIG++ + ++L + ++D+ +++ + R + DV+++ Sbjct: 1 MRVLVIGSDSPLGRALVEL-LEDLSRHDLVCLTRSASRWKSERQAKKAVRRAQADVVVDI 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFS 116 D +D ++ + +AKA G ++IS+ VF G L R + Sbjct: 60 RVEAVADGGQD----VVDLDLKRCQWVAKACQRDGACYMFISSSRVFSGDLDRRYNEGDL 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P N + G E+ V Y + Y+ILR V++ G+N + +L + + Sbjct: 116 PDNSSDT-GLLLADAEQVVRKYCDRYLILRLGPVFASDGANLVTRVLGELVSGENLVLDN 174 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 + G P ++ AR I + ++ L G +H + + +FAE + +++ Sbjct: 175 NLRGCPVASGDGARVISALLDQ--QSVGAELWGTYHYCSTETATHY-EFAEAVLAAASQ- 230 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYS-CLDCSKLANTHNIRISTWKEGV 283 +S V + P P+ + L+CSK+ NT I+ W+ + Sbjct: 231 ---FSDVSTGAVELMPLDPDAPSLNRSLECSKIRNTFAIKQQPWRNAI 275 >gi|310815370|ref|YP_003963334.1| UDP-glucose 4-epimerase [Ketogulonicigenium vulgare Y25] gi|308754105|gb|ADO42034.1| UDP-glucose 4-epimerase [Ketogulonicigenium vulgare Y25] Length = 335 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 42/224 (18%) Query: 1 MKCLVIGNNGQIAQ----SLSSM----CVQD------------VEIIRVGR---PDIDLL 37 M+ LV G G I L++M CV D V I G D+D+ Sbjct: 1 MRVLVTGGAGYIGSHTLVELAAMGYETCVVDSYANSSPIALDRVRAITNGHIEAHDVDIR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 + ++F PD +I+ A AV ++ P + +N G ++ +A ++ G + Sbjct: 61 DTAALTAVAVAFRPDAVIHFAGLKAVGESRTRPVDYYDVNVTGTLSLIRAMEAAGCNKIV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR----- 146 + S+ V+ P+ E P P N+YG++K E+ ++++ ++LR Sbjct: 121 FSSSATVYGEPQFLPMTEDHPLAPTNVYGETKFTAEKLLSAWAEAAPGRTSILLRYFNPV 180 Query: 147 TAWVYSIFG-------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 A G +N + + ++A RRE ++V D + TP Sbjct: 181 GAHASGTIGEDPVGIPNNLMPFLAQVATGRREKLAVFGDDYDTP 224 >gi|194306032|dbj|BAG55466.1| UDP-glucose 4-epimerase [uncultured bacterium] Length = 336 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 12/158 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRP----DIDLLKPKDFASFFLSFSPDVI 54 ++ L G I +LS+ +Q VE + G+ + DLL P+ F + S D + Sbjct: 18 LELLNAGYAVTIIDNLSNSKIQSVERVNALTGKEAAFYEADLLDPEALDKVFEANSFDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PID 113 I+ AA AV ++ ++P + + N G + +A G+ I S+ G T PI Sbjct: 78 IHFAALKAVGESVEKPLLYYRNNVAGTLNLVEAMQKHGVKNIVFSSSCTVYGNPETVPIR 137 Query: 114 EFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILR 146 E +P + N YG++KL E+ VA N ++LR Sbjct: 138 EDAPRSAYNPYGRTKLMMEDILSDVYVADNEWNVILLR 175 >gi|13541733|ref|NP_111421.1| dTDP-D-glucose 4,6-dehydratase [Thermoplasma volcanium GSS1] gi|14325139|dbj|BAB60064.1| dTDP-glucose 4,6-dehydratase [Thermoplasma volcanium GSS1] Length = 318 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D ++N AA + VD + PE N G I +A I ISTD VF L S Sbjct: 74 DCVVNFAAESHVDNSIKSPEPFIRSNYVGVYNILEAVRKYDIRFHQISTDEVFGSLPLDS 133 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 DE SP P N Y +K A + V SY N Y I T Sbjct: 134 SQKFDEHSPYAPRNPYSATKAAADMLVRSYINTYGIKAT 172 >gi|331697764|ref|YP_004334003.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] gi|326952453|gb|AEA26150.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] Length = 319 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRPDIDLLKPKDFASF---FL 47 MK LV G G + ++ ++ +V ++ R PD D A L Sbjct: 1 MKLLVTGGAGYVGSVCAAHLLEAGNEVVVLDDLSTGHRDAVPDGARFVEGDLAEAAGDVL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + D +++ AA + V ++ PEI + N + + +A + G P ++ ST + Sbjct: 61 AEGFDGVVHFAARSLVGESVQRPEIYWDGNVVKSLRLLEAIRTHGTPRLVFSSTAATYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E SPT P N YG SKLA + ++SY + + T+ Y Sbjct: 121 PEQVPIREDSPTRPTNPYGASKLAIDHMISSYAAAHGLAATSLRY 165 >gi|311266444|ref|XP_003131096.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Sus scrofa] Length = 390 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEKFIYVSTDEVYGGSLDK 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|29826899|ref|NP_821533.1| NDP-hexose 4-ketoreductase [Streptomyces avermitilis MA-4680] gi|29603996|dbj|BAC68068.1| putative NDP-hexose 4-ketoreductase [Streptomyces avermitilis MA-4680] Length = 299 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%) Query: 1 MKCLVIGNNGQIAQSLSS--MCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFS------- 50 M+ LV G+ G + + ++ + + V ++R GR P DL D + +S Sbjct: 1 MRILVAGSTGFLGRHITEHLLALSGVRVLRAGRSPGADLRV--DLTTATVSALAADLHAL 58 Query: 51 -PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGL 107 PD ++N A P + NA G + +A + +P +++ + + Sbjct: 59 APDAVVNCAGAVG-----GGPLLLAETNARGPAVLCEALTAADLPVRLVHLGSAGEYGTT 113 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML--RL 165 P+ E S T P YG +KLAG VA + V+LR V++ G + + L RL Sbjct: 114 PGQPLGEDSATCPQGAYGATKLAGSLTVAEAALDAVVLR---VFNPLGPDSPGTSLPGRL 170 Query: 166 AKE 168 A E Sbjct: 171 ADE 173 >gi|326796534|ref|YP_004314354.1| dTDP-4-dehydrorhamnose reductase [Marinomonas mediterranea MMB-1] gi|326547298|gb|ADZ92518.1| dTDP-4-dehydrorhamnose reductase [Marinomonas mediterranea MMB-1] Length = 286 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/209 (20%), Positives = 92/209 (44%), Gaps = 18/209 (8%) Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 ++ +P +S+ VF G E + + Y + ++ E+ + N ++LRT W Sbjct: 85 TLNVPVFMVSSVRVFSGDRNAAYMETDIPDAGSRYESALISMEQMLLGAERN-IVLRTGW 143 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR- 208 ++S +F+ S + L + ++ + G+PT +AR + H++I+ S Sbjct: 144 LFSGMHDDFVSSTIGLIQSGVNLAYQDNVIGSPTPVTDVAR----VTHSMIKQSYNGAEN 199 Query: 209 -GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY------RIFTKQYPTKAHRPAYS 261 G++H VSW E I +A + P ++ + ++ T R + Sbjct: 200 WGVYHYCC-AEEVSWLGLVEAIL-ATASQFDPRAQSEMDSINDSLAKEEGVTDIQRQS-- 255 Query: 262 CLDCSKLANTHNIRISTWKEGVRNILVNI 290 L C K+ N + I+ +W+ +R ++ ++ Sbjct: 256 -LSCRKIFNHYGIKQRSWRPTLRKLIKDL 283 >gi|228996406|ref|ZP_04156048.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] gi|228763369|gb|EEM12274.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] Length = 304 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 22/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 MK LV G G I + ++ D ++ +V D+ P + Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDP-NIDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A + IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 + PIDE NP++ YG SKL E + + Y ILR + VY Sbjct: 120 YGNPQYLPIDEKHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVY 171 >gi|120555291|ref|YP_959642.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] gi|120325140|gb|ABM19455.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] Length = 290 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 29/236 (12%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +IIN +KAE E A+A+ A + + +S+ YVFDG + Sbjct: 53 LIINALWLADPEKAEKNREATHEAAFSLPLALAEHARERNMALLQLSSCYVFDGRKQGAY 112 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 +P P+N G+ + E+ + + ++ILRT W + F + ++ + + + Sbjct: 113 IASNPGQPVNELGRWQWECEQALRTQLPRHIILRTGWSLARF-----IGKVQRSTAQGGL 167 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF----AEY 228 S+ G P + +AR I+ +A + D G W + AE Sbjct: 168 SLPGRCQGQPVAVKDLARVIVAVA----------------LQIDCGAEVWGTYQYAGAEE 211 Query: 229 I-FWE--SAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLANTHNIRISTWK 280 I +E A G P + P H P + + C+K+ NT I+ W+ Sbjct: 212 INLYELGLAIAGMPGIPEGIKVVDEVPDWGHIEPVNTTMVCTKIRNTFGIKQMPWR 267 >gi|325924075|ref|ZP_08185645.1| UDP-galactose 4-epimerase [Xanthomonas gardneri ATCC 19865] gi|325545439|gb|EGD16723.1| UDP-galactose 4-epimerase [Xanthomonas gardneri ATCC 19865] Length = 397 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 25/163 (15%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQD------------VEIIRVGRPD---IDLL 37 M+ LV G G ++A+ +C+ D ++ + RP+ +D+ Sbjct: 1 MRILVTGGTGYIGSHTCVELARRGHDVCIVDNLSNSSERVLDHLQYLMGARPEFHRMDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 P + A S D +++ AA AV ++ EP + F+ N G A+ +A + + + Sbjct: 61 AP-ELAELLSSKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAMRTAEVSNLV 119 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + S+ V+ + +PI E +P +N YG++KL EE + + Sbjct: 120 FSSSATVYGDENISPIKESAPLKAINPYGRTKLMMEEMIGDLS 162 >gi|331086880|ref|ZP_08335957.1| hypothetical protein HMPREF0987_02260 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410046|gb|EGG89481.1| hypothetical protein HMPREF0987_02260 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 652 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 29/138 (21%) Query: 32 PDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 PD+DL+ + S F + PD++ + AA+ V ED P A N G Sbjct: 338 PDLDLVVLIGSVRNSRKINSVFAKYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKT 397 Query: 85 AKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--- 140 A AAD G+ + ISTD NP NI G SK E + ++++ Sbjct: 398 ALAADRYGVEKFVLISTD--------------KAVNPTNIMGASKRMCEMIIQTFSHRCK 443 Query: 141 -NYVILRTAWVYSIFGSN 157 YV +R ++ GSN Sbjct: 444 TEYVAVRFG---NVLGSN 458 >gi|325663318|ref|ZP_08151768.1| hypothetical protein HMPREF0490_02509 [Lachnospiraceae bacterium 4_1_37FAA] gi|325470772|gb|EGC74002.1| hypothetical protein HMPREF0490_02509 [Lachnospiraceae bacterium 4_1_37FAA] Length = 652 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 29/138 (21%) Query: 32 PDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 PD+DL+ + S F + PD++ + AA+ V ED P A N G Sbjct: 338 PDLDLVVLIGSVRNSRKINSVFAKYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKT 397 Query: 85 AKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--- 140 A AAD G+ + ISTD NP NI G SK E + ++++ Sbjct: 398 ALAADRYGVEKFVLISTD--------------KAVNPTNIMGASKRMCEMIIQTFSHRCK 443 Query: 141 -NYVILRTAWVYSIFGSN 157 YV +R ++ GSN Sbjct: 444 TEYVAVRFG---NVLGSN 458 >gi|87123083|ref|ZP_01078934.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9917] gi|86168803|gb|EAQ70059.1| Putative nucleotide sugar epimerase [Synechococcus sp. RS9917] Length = 350 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 6/126 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + P V++N AA V + D P N G G + + G+ +Y S+ Sbjct: 82 ALFAAERPAVVVNLAAQAGVRYSLDNPAAYIQSNLVGFGTLLEGCRHHGVENLVYASSSS 141 Query: 103 VFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSN 157 V+ G P E P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 142 VYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRP 201 Query: 158 FLLSML 163 + ML Sbjct: 202 DMAPML 207 >gi|238786145|ref|ZP_04630098.1| Epimerase/dehydratase [Yersinia bercovieri ATCC 43970] gi|238712945|gb|EEQ05004.1| Epimerase/dehydratase [Yersinia bercovieri ATCC 43970] Length = 319 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%) Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D+IIN AA K P ++ + +N +GA I KAA+ +GI I ++ G Sbjct: 61 DLIINLAA---EHKDNVRPIDLYYKVNVDGAENICKAAEFLGIKNIVFTSSVAVYGFVEK 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSI 153 DE P N YGKSKL E+ ++ N+Y V +R V+ + Sbjct: 118 ETDESGEYAPFNHYGKSKLEAEKIYDAWFNSYSDKKLVTIRPTVVFGV 165 >gi|73989418|ref|XP_542640.2| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Canis familiaris] Length = 514 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 252 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 311 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 312 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVY 356 >gi|308175139|ref|YP_003921844.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens DSM 7] gi|307608003|emb|CBI44374.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens DSM 7] gi|328555109|gb|AEB25601.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens TA208] gi|328913463|gb|AEB65059.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens LL3] Length = 309 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +++ AA VD E +N EG +A+ +GI + + S+ VF Sbjct: 61 DAVVHLAAMVGVDSCRSNEEDVIRVNFEGTKNVAEVCGELGISTLLFSSSSEVFGDSPDF 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 P E S P + YGK+KL EE + ++ + +R ++++G Sbjct: 121 PYTETSRKLPKSAYGKAKLQSEEYLREQASDKLHIRVVRYFNVYG 165 >gi|254463608|ref|ZP_05077023.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium HTCC2083] gi|206676042|gb|EDZ40530.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium HTCC2083] Length = 332 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 4/102 (3%) Query: 31 RPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 RP I D+ + ++ F + PD +++ A AV +A + P + +N G+ ++ +A Sbjct: 51 RPRINQTDITQADALSAVFSDYRPDAVLHFAGLKAVGEAVENPLEYYRVNVGGSVSLFQA 110 Query: 88 ADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 +++G ++ S+ V+ + PI E P P N YG+SK Sbjct: 111 MENVGCNKIVFSSSATVYGDPDQVPIVENHPLRPTNPYGQSK 152 >gi|282865465|ref|ZP_06274516.1| UDP-glucose 4-epimerase [Streptomyces sp. ACTE] gi|282559509|gb|EFB65060.1| UDP-glucose 4-epimerase [Streptomyces sp. ACTE] Length = 326 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 60 AAKWLDASYDGVLHFAAFSQVGESVADPEKYWVNNVGGTTALLAAMRDAGVRTLVFSSTA 119 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + +PI E PT P + YG SKLA + + + V LR V +G Sbjct: 120 ATYGEPVSSPITETDPTAPTSPYGASKLAVDHMITGEARAHGLAAVSLRYFNVAGAYGDC 179 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A RRE ISV D + TP Sbjct: 180 GERHDPESHLIPLVLQVALGRRESISVYGDDYPTP 214 >gi|146296609|ref|YP_001180380.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410185|gb|ABP67189.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 305 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 15/172 (8%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++P + S+N G + I IY S+ V+ PID Sbjct: 69 IHQAAQVSVTKSMEDPILDCSVNILGTLNLLSFCAKYEIKKFIYASSAAVYGEPQYLPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYS----IFGSNFLLSML-R 164 E P NP++ YG SKL E+ + + + YVI R + VY FG ++S+ Sbjct: 129 ESHPKNPMSFYGISKLTAEKYIERFAQSHGFEYVIFRYSNVYGPRQDPFGEGGVISIFCE 188 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + +++++ D G T + + + ++N ++G F+++ + Sbjct: 189 RMQNNKDVTIFGD--GNQTRDFIFVEDVAEANYLALQN---PIKGTFNLSTN 235 >gi|126738432|ref|ZP_01754137.1| UDP-glucose 4-epimerase [Roseobacter sp. SK209-2-6] gi|126720231|gb|EBA16937.1| UDP-glucose 4-epimerase [Roseobacter sp. SK209-2-6] Length = 327 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F + P +++ AA + V +A +EP + + NA G+ + +AA ++G + Sbjct: 51 DLRDRARLDEVFAQYQPIAVMHFAALSQVGEAMNEPGLYWGNNAGGSLCLLEAAAAVGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ ST + +DE +P PLN YG SK A E+ + + Sbjct: 111 DFVFSSTCATYGEHDNIVLDEDAPQLPLNAYGASKRAVEDMLRDF 155 >gi|110637368|ref|YP_677575.1| ADP-glyceromanno-heptose 6-epimerase [Cytophaga hutchinsonii ATCC 33406] gi|110280049|gb|ABG58235.1| ADP-glyceromanno-heptose 6-epimerase precursor [Cytophaga hutchinsonii ATCC 33406] Length = 314 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYISTDYVFDGLSR 109 DV+ + AA + A + + +N G + A + I IY+S+ V+ G + Sbjct: 76 DVVYHLAARVSTPFANADSHLYEQVNHWGTAELVYAIEEIKTVQKLIYVSSCSVY-GSGK 134 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVY 151 IDE S NP IYG SK+ GEE V+ N N VI+R VY Sbjct: 135 ELIDENSVVNPKTIYGVSKMRGEEHVSRLGNKMNAVIIRLGNVY 178 >gi|221633720|ref|YP_002522946.1| UDP-glucose 4-epimerase [Thermomicrobium roseum DSM 5159] gi|221157120|gb|ACM06247.1| UDP-glucose 4-epimerase [Thermomicrobium roseum DSM 5159] Length = 329 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 +L+ + A+ F + D +I+ AAYT+V ++ +P N G + +A +P Sbjct: 53 ELIDREAVATCFRRWRFDAVIHLAAYTSVRESVTDPNKYVVHNVGGTIVLLEACLRHDVP 112 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ S+ V+ P+DE PT P N YG +KL E + Y Y Sbjct: 113 YLVFSSSSEVYGEARYLPLDEAHPTEPTNPYGATKLQVEHYLRWYDAAY 161 >gi|302542991|ref|ZP_07295333.1| UDP-glucose 4-epimerase [Streptomyces hygroscopicus ATCC 53653] gi|302460609|gb|EFL23702.1| UDP-glucose 4-epimerase [Streptomyces himastatinicus ATCC 53653] Length = 323 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA + V ++ PE + N G A+ A G+ ++ ST Sbjct: 61 AAKWLDASYDGVLHFAASSQVGESVVNPEKYWVNNVGGTTALLAAMRDAGVRTLVFSSTA 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + PI E S T P N YG +KLA + + A++ V LR A Y + Sbjct: 121 ATYGEPDDVPITEDSATAPTNPYGATKLAVDHMISGECAAHGLAAVSLRYFNVAGAYGAY 180 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A+ RRE ISV D + TP Sbjct: 181 GERHEPESHLIPLVLQVAQGRREAISVFGDDYPTP 215 >gi|5814303|gb|AAD52171.1|AF144879_10 unknown [Leptospira interrogans] Length = 298 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 12/197 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L + F + PD+++N K +P IN+ ++ +G Sbjct: 56 NMDVLNEDELLRLFSNIKPDIVVNCVGIIKQQKLAKDPITVLPINSLLPHRLSNLCKLVG 115 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I ISTD VF+G + E + ++YG+SK GE + + +RT+ + Sbjct: 116 ARLILISTDCVFNG-QKGNYTETDMPDAEDLYGRSKEIGEVRDEPHV---FTVRTSIIGH 171 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 SN+ L L+ + E+ F + + +IA I + +I N L G++H Sbjct: 172 ELNSNYSLVDWFLS-QNGEVRGYKKAFFSGLPSYEIAEIIKTV---IIPNP--KLYGLYH 225 Query: 213 MTADGGPVSWADFAEYI 229 +++D P+S D + Sbjct: 226 ISSD--PISKFDLLSLV 240 >gi|226357061|ref|YP_002786801.1| dTDP-glucose 4,6-dehydratase [Deinococcus deserti VCD115] gi|226319051|gb|ACO47047.1| putative dTDP-glucose 4,6-dehydratase [Deinococcus deserti VCD115] Length = 341 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF----DGL 107 D+I+N AA T VD++ P I N G + + A +GI +ISTD V+ DG Sbjct: 76 DLIVNFAAETHVDQSILGPLIFTDTNVRGTHVLLEVARELGIRMHHISTDEVYGHIPDGH 135 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 D +P +P Y SK A ++ V +Y Y + Sbjct: 136 QSVETDPLAPRSP---YAASKAAADQLVQAYYITYSL 169 >gi|315124875|ref|YP_004066879.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018597|gb|ADT66690.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 324 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL AS F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLASVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|257086425|ref|ZP_05580786.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256994455|gb|EEU81757.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] Length = 329 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 58 LCSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSST 117 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL- 159 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ Sbjct: 118 AATYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVA 165 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 L +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 166 LRYFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|302551995|ref|ZP_07304337.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] gi|302469613|gb|EFL32706.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] Length = 320 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ +PE + N G A+ A + ++ ST Sbjct: 57 AAKWLDSSYDGVLHFAAFSQVGESVAKPEKYWDNNVAGTMALLAAMREADVRTLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 + PI E +PT+P N YG +KLA + + A++ V LR V +G Sbjct: 117 ATYGEPDEVPIVESAPTSPTNPYGATKLAVDHMITGEAAAHGLGAVSLRYFNVAGAYGEH 176 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RR+ ISV + + TP Sbjct: 177 GERHDPESHLIPLVLQVAQGRRDSISVFGEDYATP 211 >gi|217962759|ref|YP_002341335.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|229142008|ref|ZP_04270533.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26] gi|217063564|gb|ACJ77814.1| UDP-glucose 4-epimerase [Bacillus cereus AH187] gi|228641297|gb|EEK97603.1| NAD-dependent epimerase/dehydratase [Bacillus cereus BDRD-ST26] Length = 290 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 18/162 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ GN +SL +Q D +I + K KDF+ + DVI + A Sbjct: 1 MKILITGNTSYAGRSLEKWLLQWPDKYLIEYISLRNEEWKDKDFSLY------DVIFHVA 54 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT-----PI 112 A + + E+ + +N + A+A A + G+ I++ST V+ GL T I Sbjct: 55 AIVHQKEKPEMEELYYRVNRDLTIALANKAKNAGVKQFIFMSTLSVY-GLVGTVGKEVMI 113 Query: 113 DEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVY 151 ++ +P P + YGKSKL E E++ + ILR +Y Sbjct: 114 NKDTPCRPNSFYGKSKLEAEGLLERLQNEDFKVAILRVPMIY 155 >gi|149730447|ref|XP_001491790.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Equus caballus] Length = 414 Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + AA + IY+STD V+ G Sbjct: 152 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDK 211 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 212 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 256 >gi|257052080|ref|YP_003129913.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690843|gb|ACV11180.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 306 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 51/100 (51%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I + AA +V+++ DEP + +N +G + +AA + ++ S+ ++ P Sbjct: 73 DLIFHKAAVVSVERSIDEPAFSHEVNFDGTLTLLEAARRVDARVVFASSAAIYGDPDTLP 132 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I E P +P + YG K A ++ + +Y + Y + A Y Sbjct: 133 ITESDPVDPQSPYGIDKCAADQYLRAYHDLYGLETVALRY 172 >gi|15673961|ref|NP_268136.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis Il1403] gi|12725023|gb|AAK06077.1|AE006428_1 UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis Il1403] gi|326407516|gb|ADZ64587.1| UDP-glucose 4-epimerase [Lactococcus lactis subsp. lactis CV56] Length = 326 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRP------DIDLLKPKDFAS 44 M LV+G G + M ++ DV ++ R P + D+ A Sbjct: 1 MTVLVLGGAGYVGSHAVDMLLKRGYDVAVVDNLVTGHRESVPANVRFYEGDVRDQAFLAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + I++ AY+ V ++ +P + F+ N GA I + + G+ I + ST Sbjct: 61 VFEKENIEGIMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 F ++PI E +P P+N YG+SKL E+ + + YV LR Sbjct: 121 FGIPEKSPISEKTPQKPINPYGESKLIMEKMMKWQSQATDMTYVALR 167 >gi|119478099|ref|ZP_01618178.1| dTDP-4-rhamnose reductase-related protein [marine gamma proteobacterium HTCC2143] gi|119448805|gb|EAW30048.1| dTDP-4-rhamnose reductase-related protein [marine gamma proteobacterium HTCC2143] Length = 290 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 61/282 (21%), Positives = 108/282 (38%), Gaps = 17/282 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +I GQI +L + + +I P + + +S D+++N Sbjct: 1 MKVQIIALKGQIRDALEAQLAIRGHYVAAPGNEISATPPAN--GWQISEDVDIVVNALTL 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + DE + + ++A+A + +P I +ST VFDG S E P Sbjct: 59 ECLQHRPDEAYLDSMV------SLARACEGAHVPMIQLSTGQVFDGGSSRRFKETDMVVP 112 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + G EE + ++++ILR ++S N L ++ ++ IS+ Sbjct: 113 ASQIGAMLSRMEELLRGSCSHHIILRIGPLFSSADGNLLTELMTQFRQGDPISLSSLDNS 172 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RGG 238 P +AR I + L ++ G +H + P S FAE ++ G Sbjct: 173 CPMHTKDLARVISAMIDQLSCGCES--WGTYHYCS-SDPASSHQFAETALAVVSQYAESG 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 P + + + T RP L K+ NT I+ W+ Sbjct: 230 PRPLMLEP-SDERNTDWSRP---ILSSEKILNTFGIKQLPWR 267 >gi|222478606|ref|YP_002564843.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222451508|gb|ACM55773.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 310 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 32/230 (13%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PD------IDLLKPKDFASFF 46 LV G G + L++ + +RV PD DL P D A Sbjct: 8 ALVTGGAGLVGSHLAAQLLDRGATVRVADDLSKGDRDRVPDGAEFVEADLTDPDDVAEA- 66 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFD 105 ++ D++ + AAYT D D+ F N + + +G+ + + S+ V+ Sbjct: 67 VTDDLDIVFHFAAYT--DTNYDDDRELFEANTAMTYNVLERMHEVGVDRLAFTSSSTVYG 124 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSNFLLSM 162 R +++ P P++IYG SKLA E ++++ ++Y + +WV+ +I G + ++ Sbjct: 125 EAPRPTPEDYGPLEPISIYGSSKLADEALISTHAHSYGV--QSWVFRFANIVGPHQRGNV 182 Query: 163 L-----RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 + +L + E+ ++ D S + ++ + I H ++E++D L Sbjct: 183 IPDFIQKLDADPSELEILGDGR-QEKSYMHVSECVDAIQH-VVEHADEDL 230 >gi|299137254|ref|ZP_07030436.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX8] gi|298600659|gb|EFI56815.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX8] Length = 322 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDI---------DLLKPKDFAS 44 M LV G G I ++S++ +Q + V R ++ D+ + Sbjct: 1 MNLLVTGGAGYIGGTVSTILMQAGHRVTVLDNLCHSKRAELPVGAEFVEADIADRPRVEA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 PD +++ AA ++ +PEI F N A+ +A + G ++ ST V Sbjct: 61 LLRELKPDGVLHFAALIEAGESMQKPEIYFRNNTASTLALLEAMHATGTNRLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + TPI+E + P N YG+SKL E+ + Sbjct: 121 YGEPKSTPIEETAALAPTNAYGESKLMVEQMLG 153 >gi|257087746|ref|ZP_05582107.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256995776|gb|EEU83078.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|323481704|gb|ADX81143.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] gi|327535995|gb|AEA94829.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 330 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|78357225|ref|YP_388674.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219630|gb|ABB38979.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 340 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 +SPD ++N AA + VD++ +P + N G + +AA + GI ++ISTD V+ L Sbjct: 76 YSPDAVLNFAAESHVDRSISDPAPFVTTNVLGTQVLMQAARTAGIKRFVHISTDEVYGSL 135 Query: 108 --SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E +P P + Y SK + V ++ Y Sbjct: 136 LPHEAPFTESNPLLPNSPYSASKAGADLMVRAFVETY 172 >gi|312278682|gb|ADQ63339.1| UDP-glucose 4-epimerase, putative [Streptococcus thermophilus ND03] Length = 318 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L +DF +PDV +I+ AAY+ V + ++P F N G + + + G+ Sbjct: 38 LADQDFMRKVFKENPDVDAVIHFAAYSLVAEFMEKPLKYFDNNTSGMVKLLEVMNECGVK 97 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P NP+N YG+SKL E + +Y YV LR Sbjct: 98 YIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR--- 154 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 155 YFNVAGVKPDGSIGEDRGPETHLLPIILQVAQGVREKIIIFGDDYNTP 202 >gi|172059834|ref|YP_001807486.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6] gi|171992351|gb|ACB63270.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6] Length = 321 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 37/197 (18%) Query: 1 MKCLVI-GNNGQIAQSLSSMCVQDVEIIR--VGRP---------------DIDLLK---P 39 M LVI G NG + ++L +QD + V RP D D L P Sbjct: 1 MTHLVITGANGFVGRALCRRALQDGHTVTALVRRPGGCIDGVREWVHGTADFDHLDEAWP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIPCIY 97 D A+ D +I+ AA V + E +P+ AF + N G +A+AA + G+ I Sbjct: 61 ADLAA-------DCVIHLAARVHVMRDESPDPDAAFDATNVVGTLRLAQAARNHGVRRIV 113 Query: 98 I--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 S V +G P+ E +P + YG+SKL E ++A + + V++R VY Sbjct: 114 FASSIKAVGEGDDGAPLSEAVEPDPQDAYGRSKLHAERQLAQFGASAGLDVVVVRPPLVY 173 Query: 152 S-IFGSNFLLSMLRLAK 167 +NFL M +A+ Sbjct: 174 GPAVRANFLRMMDAVAR 190 >gi|256763403|ref|ZP_05503983.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|256684654|gb|EEU24349.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] Length = 330 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|327534703|gb|AEA93537.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 329 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|326402730|ref|YP_004282811.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Acidiphilium multivorum AIU301] gi|325049591|dbj|BAJ79929.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Acidiphilium multivorum AIU301] Length = 298 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIG 92 D+ P + PD ++ A A+ +A + P AF++N +G +A+A A + G Sbjct: 39 DITDPAATETSVRDVRPDACVHLAGIAAIPEAREHPRRAFAVNLDGTLNLARALLAHAPG 98 Query: 93 IPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 I+ + + R+ P+DE +P PLN Y SK A + Sbjct: 99 CQLIHAGSADCYGASFRSGQPLDESAPLAPLNTYAASKAAAD 140 >gi|315153156|gb|EFT97172.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0031] gi|315157406|gb|EFU01423.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0312] Length = 292 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 32 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 91 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 92 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 139 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 140 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 189 >gi|227498816|ref|ZP_03928956.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] gi|226904268|gb|EEH90186.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] Length = 315 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 8/125 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+L P+ F F + D +I+ AA V +E +P S+N G A+ + A + Sbjct: 50 IDILTPQ-FQEFMAARHFDAVIHLAAQIEVASSERDPLRDASLNIGGTLAVLEGARKAHV 108 Query: 94 P-CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ S+ V+ S P+ E +P PL+ YG SK+ E + S++ +VILR Sbjct: 109 SRFVFASSAAVYGHPSEALLPLAEEAPLCPLSPYGLSKVTAENYIRMLAPSFSMEWVILR 168 Query: 147 TAWVY 151 A VY Sbjct: 169 FANVY 173 >gi|76802690|ref|YP_330785.1| nucleoside-diphosphate-sugar epimerase 2 ( UDP-glucose 4-epimerase ) [Natronomonas pharaonis DSM 2160] gi|76558555|emb|CAI50147.1| nucleoside-diphosphate-sugar epimerase 2 (probable UDP-glucose 4-epimerase) [Natronomonas pharaonis DSM 2160] Length = 313 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 5/101 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D++ + AA AVD D+P+ F +N + + + S+G I + S+ V+ R Sbjct: 71 DLVFHLAADKAVDS--DDPDEQFRLNTDLTAGVLERMRSVGCDAIAFTSSSTVYGEAPRP 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++++P P+++YG +KLA E ++ + +++ + AWV+ Sbjct: 129 TPEDYAPLEPISMYGAAKLAEESLLSVHAHSHGM--DAWVF 167 >gi|257387487|ref|YP_003177260.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] gi|257169794|gb|ACV47553.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] Length = 328 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V ++ + P +N +G + AA GI + S+ V+ Sbjct: 81 DYVYHQAAQAGVRQSVENPRKYDEVNVDGTLNLLDAARETGIERFVMASSSSVYGKPRYL 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 P DE PT P++ YG SKLA E V +Y+ Y + A Y +++G +M Sbjct: 141 PYDEEHPTTPVSPYGASKLAAERYVCAYSEVYDLSAVALRYFTVYGPRMRPNM 193 >gi|108760627|ref|YP_631701.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622] gi|108464507|gb|ABF89692.1| UDP-glucose 4-epimerase [Myxococcus xanthus DK 1622] Length = 314 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 ++ ++ + S PDV+ + AA V ++ D+P +N G + +AA G+ Sbjct: 52 IRSREASELIKSEKPDVLCHLAAQMDVRRSVDDPSFDADVNIRGMLNLLEAARVSGVKKV 111 Query: 96 IYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV 150 I+ ST G P E PT P++ YG SK +GE + A Y YV LR A V Sbjct: 112 IFSSTGGAIYGEQDVFPAPESHPTRPISPYGVSKASGELYLGYYRAQYGLPYVALRYANV 171 Query: 151 YS 152 Y Sbjct: 172 YG 173 >gi|22299749|ref|NP_682996.1| UDP-glucose 4-epimerase [Thermosynechococcus elongatus BP-1] gi|22295933|dbj|BAC09758.1| UDP-glucose 4-epimerase [Thermosynechococcus elongatus BP-1] Length = 308 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 RP +D L F ++ +++ AAY V ++ P+ + N GA + +A + Sbjct: 31 RPLLDWL--------FQTYPVTAVMHFAAYIEVGESIHSPDRFYQNNVHGALTLLQAMVA 82 Query: 91 IGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IP I+ ST V+ PI E P P+N YG+SK E+ VA Y Sbjct: 83 AKIPYFIFSSTAAVYGVPPEIPISETCPCAPINPYGRSKWMVEQMVADMGTAY 135 >gi|328767043|gb|EGF77094.1| hypothetical protein BATDEDRAFT_36100 [Batrachochytrium dendrobatidis JAM81] Length = 330 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ +D F SF PD + + A V ++ +P + N G + +A G Sbjct: 52 DIRNKEDLEKAFTSFKPDAVFHFCASIEVGESCIDPLKYYENNVSGTITLLQAMQKHGTK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ ST +F R PI EF T P N YG +KLA E Sbjct: 112 YFVFSSTAALFGMPDRVPIHEFDATVPKNPYGDTKLAVE 150 >gi|297529688|ref|YP_003670963.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] gi|297252940|gb|ADI26386.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] Length = 328 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 16/153 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + +I+ AA + V ++ +EP + N G + + G+ I + ST V+ Sbjct: 61 FRQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG----- 155 + PI E PT P N YG++KLA E+ + +Y + LR V +G Sbjct: 121 GEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGE 180 Query: 156 -----SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++ +R EISV D + TP Sbjct: 181 DHNPETHLIPLILKVPLGQREEISVFGDDYDTP 213 >gi|222099007|ref|YP_002533575.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] gi|221571397|gb|ACM22209.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] Length = 342 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 11/105 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVF 104 F PD+++N AA + VD++ ++PEI N G + A GI + +STD V+ Sbjct: 70 FEEERPDIVVNFAAESHVDRSIEDPEIFLKTNIIGTQVLMDACRKYGIKRFHQVSTDEVY 129 Query: 105 DGLSRTPID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L P+D E SP P + Y SK + + V +Y Y Sbjct: 130 GDL---PLDRPDLKFTEKSPLKPSSPYSASKASADLLVMAYHRTY 171 >gi|221632263|ref|YP_002521484.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] gi|221157013|gb|ACM06140.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] Length = 344 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA T VD++ EP N G + + A +G+ +++STD V+ + Sbjct: 79 DAVVNFAAETHVDRSLLEPAAFIRTNVWGTMVLLEQALRLGVGRFLHVSTDEVYGEVLSG 138 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E P P N Y SK A E V +Y +Y Sbjct: 139 SVSEDEPLRPRNPYAASKAAAEHFVFAYWTSY 170 >gi|294813086|ref|ZP_06771729.1| Putative UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|326441612|ref|ZP_08216346.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294325685|gb|EFG07328.1| Putative UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 319 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AA++ V ++ PE + N G A+ A S + ++ ST Sbjct: 56 AAKWLDPSYDAVLHFAAFSQVGESVAHPEKYWENNVGGTMALLSAMRSARVRTLVFSSTA 115 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG----- 155 + RTPI E PT P N YG SKLA + + + + + Y ++ G Sbjct: 116 ATYGEPVRTPIAESDPTAPTNPYGASKLAVDHMIGGEAAAHGLAAVSLRYFNVAGAHRGQ 175 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L +A RRE I+V D + TP Sbjct: 176 GERHDPETHLIPLLLDVALGRRESIAVYGDDYPTP 210 >gi|289579855|ref|YP_003478321.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] gi|289529408|gb|ADD03759.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] Length = 328 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 18/151 (11%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 EI+ D DLL L+ DVI + AA V K+ +EP+ N G + Sbjct: 61 EIVDGSVTDADLLTS-------LTNQTDVIYHQAAQAGVRKSVEEPDKVNEFNVTGTVNV 113 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +AA + + +Y S+ V+ P DE P P++ YG SKL+ E + Y Y Sbjct: 114 LEAARTNDVDRVVYASSSSVYGKPEYLPYDEAHPNEPVSPYGVSKLSAEHYMRVYNEVYG 173 Query: 144 ILRTAWVY-SIFG---------SNFLLSMLR 164 + + Y +++G SNF+ +R Sbjct: 174 LPTVSLRYFTVYGPRMRPNMAISNFVSRCMR 204 >gi|39997345|ref|NP_953296.1| carbohydrate oxidoreductase [Geobacter sulfurreducens PCA] gi|39984236|gb|AAR35623.1| carbohydrate oxidoreductase, putative [Geobacter sulfurreducens PCA] gi|307634989|gb|ADI85004.2| carbohydrate oxidoreductase, putative [Geobacter sulfurreducens KN400] Length = 304 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+IN A ++P + + NA +A A + G ++ISTD VF G + Sbjct: 75 PDVVINCVGVIKQLPAAEDPVVCIATNALFPHRLAVACKAAGARLVHISTDCVFSG-EKG 133 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E ++ ++YG+SK GE +++ V LRT+ + + L L++ + Sbjct: 134 DYRETDRSDATDLYGRSKFLGEVT----SDHCVTLRTSIIGHELKGGYGLVEWFLSR-KG 188 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + + T ++IAR I + D +L+G++ + ++ P+S + E I Sbjct: 189 PVKGFTNAIYTGFPTIEIARIIEKYI-----ICDMNLKGLYQVASE--PISKYELLELI 240 >gi|86151999|ref|ZP_01070212.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] gi|56783475|emb|CAI38728.1| putative sugar epimerase [Campylobacter jejuni] gi|85841107|gb|EAQ58356.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] Length = 324 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL AS F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLASVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAY 160 >gi|291279523|ref|YP_003496358.1| hypothetical protein DEFDS_1133 [Deferribacter desulfuricans SSM1] gi|290754225|dbj|BAI80602.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 310 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 16/164 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS-----FSPDVIINP 57 LV G +G I + S+ D I +GR +I K F SF S PD I Sbjct: 6 LLVTGASGFIGRHFVSLLSDD-SFIALGRRNIGF---KHFISFDFSKDKSLIFPDDIETV 61 Query: 58 AAYTAVDKAEDEPEIAFSINAEG-AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 + K ++ + F IN + A I A + + IS+ +++ E+ Sbjct: 62 VHFAGCTKTINKDD-YFKINVDATANLIEMAVKNKVKKFVLISSQAAAGSNAKS---EYD 117 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSIFGSNF 158 +NP++IYGKSKL E+KV Y N + +I+R V+ F ++F Sbjct: 118 KSNPVSIYGKSKLLAEKKVLQYKNEIDVLIIRPPAVFGPFDTDF 161 >gi|315161559|gb|EFU05576.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0645] Length = 280 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 20 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 79 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 80 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 127 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 128 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LSQRAELSIFGDDYDTPDG 177 >gi|302341590|ref|YP_003806119.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301638203|gb|ADK83525.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 312 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 23/174 (13%) Query: 1 MKCLVIGNNGQIAQSLS------SMCVQDVEIIRVGRPD----------IDLLKPKDFAS 44 MK L+ G G I ++ V V+ + GRP+ +D+ P+ A Sbjct: 1 MKILLTGGAGFIGSHVAEAFLGQGHAVTIVDDLSSGRPENAPAGAELAVMDIASPQA-AE 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD-Y 102 S DV+ + AA +V + ++P+ +N G + +A G+ I+IS+ Sbjct: 60 LMASGGFDVLCHHAAQISVPFSVEDPQADARVNILGLLNLLEAGRRGGLRRVIFISSGGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 V+ + P DE P PL+ Y SKL GE +A Y N+ + LR A VY Sbjct: 120 VYGEIPDAPADEQRPALPLSPYAVSKLCGETYLAYYAANFGLEALTLRYANVYG 173 >gi|296452603|ref|ZP_06894297.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP08] gi|296880985|ref|ZP_06904931.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP07] gi|296258564|gb|EFH05465.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP08] gi|296428006|gb|EFH13907.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile NAP07] Length = 327 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 11/104 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ + P++ N G + A+ G+ + ISTD V+ L Sbjct: 77 DIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDL--- 133 Query: 111 PID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 PID E SP NP + Y SK + + V+SY Y +L T Sbjct: 134 PIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYGLLTT 177 >gi|226324405|ref|ZP_03799923.1| hypothetical protein COPCOM_02186 [Coprococcus comes ATCC 27758] gi|225206853|gb|EEG89207.1| hypothetical protein COPCOM_02186 [Coprococcus comes ATCC 27758] Length = 651 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 22/114 (19%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 + PDV+ + AA+ V ED P A N G A+AAD G+ + ISTD Sbjct: 364 YRPDVVFHAAAHKHVPLMEDSPNEAIKNNVFGTYKTARAADKYGVKKFVLISTD------ 417 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN 157 NP NI G SK E V +++ YVI+R ++ GSN Sbjct: 418 --------KAVNPTNIMGASKRMCEMIVQTFSKYSRTEYVIVRFG---NVLGSN 460 >gi|316936063|ref|YP_004111045.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris DX-1] gi|315603777|gb|ADU46312.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris DX-1] Length = 327 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Query: 41 DFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +F + P + I++ AA V ++ +P + N A + A GIP ++ Sbjct: 59 EFVGRIMDEHPIEAIVHFAASIVVPESVAKPLAYYGNNTANARTLLDCAIKRGIPHVVFS 118 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ST V+ RTP+DE PT P+N YG+SKL E +A ++ +Y LR Sbjct: 119 STAAVYGEPERTPVDEGDPTQPINPYGRSKLMVEWMLADVAQAHPFSYAALR 170 >gi|116749620|ref|YP_846307.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116698684|gb|ABK17872.1| NAD-dependent epimerase/dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 312 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ AA T V ++ PE+ +N G + +A+ G+ ++ ST G P+ Sbjct: 73 VIHLAANTNVVQSVANPELNLDVNVRGTFNLLRASVEHGVERFVFASTGGAIVGDVTPPV 132 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 E P NP++ YG SKLAGE +++ Y V LR + +Y F Sbjct: 133 HEDMPPNPISPYGASKLAGEGYCSAFWGAYGLPTVSLRFSNIYGPF 178 >gi|225420240|ref|ZP_03762543.1| hypothetical protein CLOSTASPAR_06583 [Clostridium asparagiforme DSM 15981] gi|225041057|gb|EEG51303.1| hypothetical protein CLOSTASPAR_06583 [Clostridium asparagiforme DSM 15981] Length = 298 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVG--RPDI----------DLLKPKDFASFFL 47 M L+IG NG + L S +C E+I +P D+ + Sbjct: 1 MATLIIGGNGLVGTRLVSHLCGMGEEVISFSGHKPSCEVRGCTYVQGDVTEYGTINQILH 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + + I++ AA + D P + N G +AA + G+ +Y+S+ V+ Sbjct: 61 THKVERILHNAAVSHPKLFLDNPYKIYRTNVVGTLTALEAARNYGVSRFVYMSSGAVYGS 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +S + E +P + + YG +K+A EE V +Y + V LR +VY Sbjct: 121 VSLETVPEETPLHSESPYGATKVACEELVRNYGLDSVSLRIGFVYG 166 >gi|213408357|ref|XP_002174949.1| gal10 [Schizosaccharomyces japonicus yFS275] gi|212002996|gb|EEB08656.1| gal10 [Schizosaccharomyces japonicus yFS275] Length = 690 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDL F ++ + +I+ AA+ AV ++ +P + N GA A+ + + G+ Sbjct: 61 IDLHDKAALNKVFDDYAIEGVIHFAAFKAVGESAQKPLEYYENNVGGAVALLEVMSTHGV 120 Query: 94 PCI-YISTDYVFDGLSR------TPIDEFSPTNPLNIYGKSKLAGEEKVA 136 I Y S+ V+ +SR PI+E PT+P++ YGK+K A E +A Sbjct: 121 KTIVYSSSATVYGDVSRFKDHNYLPINEKCPTDPVSPYGKTKYAIENIIA 170 >gi|288963208|ref|YP_003453487.1| UDP-glucose 4-epimerase [Azospirillum sp. B510] gi|288915460|dbj|BAI76943.1| UDP-glucose 4-epimerase [Azospirillum sp. B510] Length = 338 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 23/193 (11%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 A F +++ A V ++ + P + N + A+ +A GI I+ ST Sbjct: 69 LADIFARHGVGTVMHFAGSIVVPESVERPLAYYRNNTVKSHALIEACVEAGIGRFIFSST 128 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVIL----------- 145 V+ R PIDE +PT P+N YG SKL E + A++ YV L Sbjct: 129 AAVYGMPDRLPIDERTPTKPINPYGSSKLMTEWMLRDSAAAHDLRYVALRYFNVAGADPQ 188 Query: 146 -RTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 R+ V + ++ + +R E+ + D + TP R I ++ + +D Sbjct: 189 GRSGQVSKVATHLIKIAAQTVTGQRAELQIFGDDYDTPDGT--CVRDYIHVS----DLAD 242 Query: 205 TSLRGIFHMTADG 217 + + H+ A G Sbjct: 243 AHVAALRHLEAGG 255 >gi|256618651|ref|ZP_05475497.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|257089481|ref|ZP_05583842.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] gi|256598178|gb|EEU17354.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256998293|gb|EEU84813.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] Length = 329 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 36/235 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 M LV+G G I + V+ + G P + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHPSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSM 162 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRY 168 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 169 FNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|311069912|ref|YP_003974835.1| hypothetical protein BATR1942_14910 [Bacillus atrophaeus 1942] gi|310870429|gb|ADP33904.1| hypothetical protein BATR1942_14910 [Bacillus atrophaeus 1942] Length = 309 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +++ AA VD E +N EG + + +GI + + S+ VF Sbjct: 61 DAVVHLAAMVGVDSCRSNGEDVIRVNFEGTKNVTEVCKELGISTLLFSSSSEVFGDSPDF 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 P E S P + YGK+KL EE + + + +R ++++G+ Sbjct: 121 PFTETSQKLPKSAYGKAKLKSEEYLREQASEQLHIRVVRYFNVYGAK 167 >gi|254973886|ref|ZP_05270358.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-66c26] gi|255091271|ref|ZP_05320749.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile CIP 107932] gi|255312930|ref|ZP_05354513.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-76w55] gi|255515689|ref|ZP_05383365.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-97b34] gi|255648783|ref|ZP_05395685.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-37x79] gi|260682003|ref|YP_003213288.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile CD196] gi|260685601|ref|YP_003216734.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile R20291] gi|306518900|ref|ZP_07405247.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile QCD-32g58] gi|260208166|emb|CBA60481.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile CD196] gi|260211617|emb|CBE01850.1| dtdp-glucose 4,6-dehydratase [Clostridium difficile R20291] Length = 327 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 11/104 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ + P++ N G + A+ G+ + ISTD V+ L Sbjct: 77 DIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDL--- 133 Query: 111 PID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 PID E SP NP + Y SK + + V+SY Y +L T Sbjct: 134 PIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYGLLTT 177 >gi|293363761|ref|ZP_06610503.1| UDP-glucose 4-epimerase [Mycoplasma alligatoris A21JP2] gi|292552682|gb|EFF41450.1| UDP-glucose 4-epimerase [Mycoplasma alligatoris A21JP2] Length = 325 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGI 93 D+ KD F D I++ AA V ++ +P F N EG I K + Sbjct: 51 DITNKKDLDELFKKHDFDCIMDFAAKIVVPESVIKPLEYFFNNTEGVRLLIEKVVEKNIK 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILR 146 I+ ST V+ + DE S NP+N YG SKLA E+ + S Y NY ILR Sbjct: 111 NFIFSSTAAVYGQIQSGICDENSFLNPINPYGDSKLAAEKIIQSSAYAYKFNYAILR 167 >gi|307103361|gb|EFN51622.1| hypothetical protein CHLNCDRAFT_140037 [Chlorella variabilis] Length = 311 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 8/112 (7%) Query: 79 EGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 EG G A A ++ P ++ISTD+V+DG S E + P+N YG++K GE +VA Sbjct: 85 EGEGEAAARAVNVPQPVLVHISTDHVYDGGSSF-YREDAELRPVNTYGRTKADGEAEVAL 143 Query: 138 YTNNYVILRTAWVYS------IFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 +VILR + ++ I FL + ++ + D++ TPT Sbjct: 144 RWRRHVILRPSIIFGPPPPNPIRRGQFLQFVDSCLAAQKPSTFFTDEWRTPT 195 >gi|312193947|ref|YP_004014008.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] gi|311225283|gb|ADP78138.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] Length = 308 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 97/245 (39%), Gaps = 50/245 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR----------------------PDIDL 36 M+ LV+G G + L+S DV + G +D+ Sbjct: 1 MRVLVLGGAGMLGHELASALAGRHDVGVTVHGPRPPRRRDRSDPWAGALPANRIFAGLDV 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI-----AFSINAEGAGAIAKAADSI 91 D A F P+ ++N AV + PE A IN +A+ Sbjct: 61 RCQDDLAGLLADFRPEAVVN-----AVGLVKQRPEGRTALPAVEINTVFPHRLARLCRIA 115 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEK---VASYTNNYVILRTA 148 G+ +++S+D VF G R E +P+++YG SKL GE + V + + + L A Sbjct: 116 GVRMVHVSSDCVFSG-RRGRYTEDDQPDPVDVYGMSKLLGEIREAPVVTLRTSIIGLEPA 174 Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 S FL +++ RR I T + ++ AR + ++ L ++ D L Sbjct: 175 GRGSGLVEWFLAQTGQVSGYRRAIY-------TGLTTMEFARVVDRL---LTKHED--LT 222 Query: 209 GIFHM 213 G++H+ Sbjct: 223 GLWHV 227 >gi|110668874|ref|YP_658685.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626621|emb|CAJ53087.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 332 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 + II+ AA T D E F+IN +G + +AA G+ ++ S+ V+ + T Sbjct: 83 ETIIHLAAITGAASTHDRREETFAINYDGTENVLRAAGKFGVKNVVFASSCNVYGRAAET 142 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVY 151 I E + +PLN Y +SKL E + V +Y + LR + Y Sbjct: 143 EITEHTDPDPLNPYAESKLKAESLLRDAVDTYNFDGTALRMSTNY 187 >gi|255654313|ref|ZP_05399722.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-23m63] Length = 327 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 11/104 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ + P++ N G + A+ G+ + ISTD V+ L Sbjct: 77 DIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDL--- 133 Query: 111 PID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 PID E SP NP + Y SK + + V+SY Y +L T Sbjct: 134 PIDRKDLFFTEQSPINPSSPYSASKASADLLVSSYYRTYGLLTT 177 >gi|325265273|ref|ZP_08131998.1| capsular polysaccharide biosynthesis protein Cap5D [Clostridium sp. D5] gi|324029452|gb|EGB90742.1| capsular polysaccharide biosynthesis protein Cap5D [Clostridium sp. D5] Length = 664 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 38/195 (19%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 S F + PD++ + AA+ V ED P A N G +A AAD G+ + ISTD Sbjct: 359 SVFAQYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKVALAADRHGVEKFVLISTD- 417 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNF 158 NP NI G SK E + + N+ YV +R ++ GSN Sbjct: 418 -------------KAVNPTNIMGASKRMCEMIIQVFNNHSKTEYVAVRFG---NVLGSNG 461 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQ--IARAIIQI--AHNLIENSDTSLRG--IFH 212 S++ L K++ E G P + I R + I A +L+ + S +G IF Sbjct: 462 --SVIPLFKKQIEA-------GGPVTVTHPDIIRYFMTIPEAVSLVLQAGASAKGGEIFV 512 Query: 213 MTADGGPVSWADFAE 227 + G PV D A+ Sbjct: 513 LDM-GQPVKIVDLAK 526 >gi|148241305|ref|YP_001226462.1| nucleoside-diphosphate-sugar epimerase [Synechococcus sp. RCC307] gi|147849615|emb|CAK27109.1| Nucleoside-diphosphate-sugar epimerase [Synechococcus sp. RCC307] Length = 320 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 24/188 (12%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-------- 51 MK + G++G + +L SS ++ I + R +D L FF+ ++ Sbjct: 1 MKVAITGSSGFVGSNLVSSFIANSIDFICIDRFPLDPLVVSRPCQFFVDYADITRLVNLL 60 Query: 52 ---DVIINPA--AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF- 104 D +++ A A+ V E + N E + KA+ ++ + IY+S+ V Sbjct: 61 KDVDCVVHLAGRAHKPVQNDESAFQEFKQANVEVLACVVKASQAVSVKRIIYVSSIGVLG 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSIFGSNFL 159 TP +F+ +P +YG SKL E + SY +N +VILR +Y G N Sbjct: 121 SNTPNTPFTDFTSPSPSALYGHSKLEAERFLVSYLSNDFSIDWVILRPPLIY---GPNCP 177 Query: 160 LSMLRLAK 167 +M RL + Sbjct: 178 GNMSRLLR 185 >gi|19113533|ref|NP_596741.1| 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase (predicted) [Schizosaccharomyces pombe 972h-] gi|74582167|sp|O43050|ERG26_SCHPO RecName: Full=Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating gi|2924499|emb|CAA17691.1| 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase (predicted) [Schizosaccharomyces pombe] Length = 340 Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 17/216 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL K D F F P V+I+ A+ + A D I F +N +G I KA + Sbjct: 55 DLTKQGDIERVFEEFHPRVVIHTAS-PVHNLARD---IYFEVNVDGTANIIKACQKFNVD 110 Query: 94 PCIYIST-DYVFDGLSRTPIDEFSPTNPLNI--YGKSKLAGEEKVASYTNNYVILRTAWV 150 +Y S+ VF+G +DE P +++ Y +SK E++V ++ + V Sbjct: 111 ALVYTSSAGVVFNGADLINVDESQPIPEVHMDAYNESKALAEKQVLEASSESLKTAALRV 170 Query: 151 YSIFGSN------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 +FG +LS+L+ + + ++ + F T A A + NL+ ++ Sbjct: 171 AGLFGPGDRQLVPGMLSVLKNGQTKFQLGDNLNLFDF-TYIENAAYAHLLAMDNLLSSNP 229 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T+ +F +T +G + + DFA I W A PY Sbjct: 230 TANGQVFFIT-NGQVIYFWDFARAI-WAHAGHVPPY 263 >gi|255970877|ref|ZP_05421463.1| UDP-glucose 4-epimerase [Enterococcus faecalis T1] gi|255961895|gb|EET94371.1| UDP-glucose 4-epimerase [Enterococcus faecalis T1] Length = 237 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 31 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 90 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 91 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 138 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 139 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 188 >gi|322370659|ref|ZP_08045215.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] gi|320549617|gb|EFW91275.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] Length = 331 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Query: 25 EIIRVGRPDIDLL--KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 EI R+G D++ L + +D L S DV+++ AA + VD D+ E A N G Sbjct: 49 EIHRIGDIDVEFLDVRRRDRLESALDGS-DVVLHLAAASDVDSCRDDEEFALETNVHGTT 107 Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 +A G + + V PI + P+N YG++KL GE + S Sbjct: 108 NVAWFCKRTGAGLAFPFSMAVLGDPEEFPITVDASRRPMNWYGETKLVGERTIES 162 >gi|325107112|ref|YP_004268180.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] gi|324967380|gb|ADY58158.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] Length = 322 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 2/125 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ + PD + + AA +V ++ EP +N G + +AA G Sbjct: 49 EVDICQRDAVRKVLEQERPDAVCHQAAQMSVGRSVQEPSFDAEVNILGFLNVLEAAAETG 108 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ++ S+ V G P E P NP++ YG SK AGE + +T + + A Y Sbjct: 109 VKRIVFASSGGVLYGDVTEPQPETYPANPISPYGISKWAGERYLRFFTAEHGLETVALRY 168 Query: 152 S-IFG 155 S ++G Sbjct: 169 SNVYG 173 >gi|257415685|ref|ZP_05592679.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257157513|gb|EEU87473.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 329 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|253997091|ref|YP_003049155.1| UDP-glucose 4-epimerase [Methylotenera mobilis JLW8] gi|253983770|gb|ACT48628.1| UDP-glucose 4-epimerase [Methylotenera mobilis JLW8] Length = 327 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 16/154 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPDI---------DLLKPKDFASF 45 MK L++G G I + M V + + G D DL Sbjct: 1 MKILLVGGAGYIGSHMLKMLLAAGHQVVTFDNLSSGYRDAVLGGEFIQGDLADTVALDQV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F P+ +++ A+Y V ++ P+I + N + + I+ ST +F Sbjct: 61 FTQHQPEAVMHFASYIQVGESVKRPDIYYQNNVSNTLNLLNTMVKHDVKKFIFSSTAAIF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 PIDE P P+N YGKSK E+ +A Y Sbjct: 121 GEPVAVPIDELHPKQPVNPYGKSKWMIEQALADY 154 >gi|222479501|ref|YP_002565738.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222452403|gb|ACM56668.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 345 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 43/89 (48%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+ + AA + VD E+ ++A+ +N G +A G + + V P Sbjct: 91 DVVCHLAAISGVDDCEENADLAYEVNVTGTNNVAWFCRKTGAALAFPFSMAVLGDPQSFP 150 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 I P +PLN YG++KL GE + ++ + Sbjct: 151 ITADQPRDPLNWYGRTKLLGERAIETFAD 179 >gi|325527157|gb|EGD04558.1| UDP-glucose 4-epimerase [Burkholderia sp. TJI49] Length = 321 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 9/134 (6%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIPCIYI-- 98 A++ D +I+ AA V + E +P+ AF + N G +A+AA + G+ I Sbjct: 57 AAWPADLGADCVIHLAARVHVMRDESPDPDAAFDATNVGGTLRLAEAARNHGVRRIVFAS 116 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS-I 153 S V +G P+ E + +P + YG+SKL E ++A + + VI+R VY Sbjct: 117 SIKAVGEGDGGIPLSEHASPDPQDAYGRSKLRAERQLADFGKTAGLDVVIVRPPLVYGPT 176 Query: 154 FGSNFLLSMLRLAK 167 +NFL M +A+ Sbjct: 177 VRANFLRMMDAIAR 190 >gi|323137040|ref|ZP_08072120.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322397801|gb|EFY00323.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 325 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 7/144 (4%) Query: 1 MKCLV-IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 ++CL+ G++G + L + + + + + R DI +DF S D I + AA Sbjct: 28 VRCLLRYGSSGSVG-FLDDVLTRSPDQLEIRRGDI---IDRDFVSKCCE-GVDTIFHLAA 82 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPT 118 ++ + + P F +N G I + A G+ I+ ST VF R P+DE P Sbjct: 83 RISIPYSYEAPRDCFDVNVTGVLNILEGARRHGVRRVIHTSTSEVFGTAERVPMDETHPL 142 Query: 119 NPLNIYGKSKLAGEEKVASYTNNY 142 + Y SK+A ++ V SY ++ Sbjct: 143 KGQSPYSASKIAADKLVESYVCSF 166 >gi|256854076|ref|ZP_05559441.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300860730|ref|ZP_07106817.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256711019|gb|EEU26062.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300849769|gb|EFK77519.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 330 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|212550155|gb|ACJ26806.1| dTDP-4-dehydrorhamnose reductase (L-QuiNAc synthase) [Salmonella enterica subsp. diarizonae] Length = 289 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 35/248 (14%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGR-----------------PDIDLLKPKDF 42 K L++G NG + SL + E+I R ++D K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGGYEVIGTTRNIVVAEQLEQKLNVKIIDNVDATDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S P++++N A ++ IN+ +A+ + I+ STD Sbjct: 64 ESVVEEHKPNIVLNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHNAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G +++ ++ +++YGKSK GE Y + ++ LRT+ + GSN L Sbjct: 124 IFKGTKGNYVED-DESDAIDLYGKSKFLGE---VGY-DGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+++ F G PT + ++ H + +L G+FH++ D P+S Sbjct: 179 WFLSQKNSVTGFTNAIFSGLPTCYMA------EVIHKYV--LPNNLSGLFHLSVD--PIS 228 Query: 222 WADFAEYI 229 D I Sbjct: 229 KYDLLNII 236 >gi|126436348|ref|YP_001072039.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS] gi|126236148|gb|ABN99548.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. JLS] Length = 355 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLS----RTPIDEFSPTNPLNI 123 P++A +N + + +AA+++ P ++ S++ V+ + + P+ +P NP + Sbjct: 90 PKVARKVNVDATATLVRAAEALPQPPRFVQASSNAVYGARNPHRHKAPVTAETPPNPTEL 149 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 YG KL EE V + + +V+LR V S+ Sbjct: 150 YGAHKLEAEEIVRASSLEWVVLRLGGVLSV 179 >gi|108800725|ref|YP_640922.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS] gi|119869864|ref|YP_939816.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS] gi|108771144|gb|ABG09866.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. MCS] gi|119695953|gb|ABL93026.1| NAD-dependent epimerase/dehydratase [Mycobacterium sp. KMS] Length = 355 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 6/90 (6%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLS----RTPIDEFSPTNPLNI 123 P++A +N + + +AA+++ P ++ S++ V+ + + P+ +P NP + Sbjct: 90 PKVARKVNVDATATLVRAAEALPQPPRFVQASSNAVYGARNPHRHKAPVTAETPPNPTEL 149 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 YG KL EE V + + +V+LR V S+ Sbjct: 150 YGAHKLEAEEIVRASSLEWVVLRLGGVLSV 179 >gi|91204592|emb|CAJ70820.1| similar to UDP-glucose 4-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 310 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 22/174 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII---RVGRPD----------IDLLKPKDFAS 44 MK LV G G IA L + DV I+ GR + +D+ A Sbjct: 1 MKILVTGGAGFIASHLVDNLIAKGHDVVIVDNLSTGREENINPKVRFYKMDICNVAALAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD-Y 102 F PDV+ + AA+ V K+ + P +IN G+ + + + + IY ST Sbjct: 61 IFDKERPDVVNHHAAHADVRKSVEMPAYDANINILGSLNLCQLSMKYQVKKFIYASTGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYS 152 V+ R P+ E SP PL+ YG SK E ++ Y ++ ILR VY Sbjct: 121 VYGEPKRMPVTEESPIEPLSQYGVSKHTVEHYLSVFNKLYHMDFTILRYPNVYG 174 >gi|312900800|ref|ZP_07760095.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] gi|311292085|gb|EFQ70641.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] Length = 320 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|113868851|ref|YP_727340.1| NAD dependent sugar epimerase [Ralstonia eutropha H16] gi|113527627|emb|CAJ93972.1| NAD dependent sugar epimerase [Ralstonia eutropha H16] Length = 360 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 11/115 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ A +F P++I++ AA V ++ EP F++NA+G + +AA ++ Sbjct: 69 DICDYPSLAEAVRAFEPELILHLAAQPLVRRSYREPLSTFAVNAQGTANVLEAARAVKSV 128 Query: 92 -GIPCIYISTDYVFDGLSRT---PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ C I+TD V+ L+R P E P + Y SK A E + SY +Y Sbjct: 129 RGVLC--ITTDKVY--LNREWPWPYRENDPLGGKDPYSASKAAAEMVIQSYAASY 179 >gi|16519870|ref|NP_443990.1| conserved putative nucleotide sugar epimerase/dehydrogenase [Sinorhizobium fredii NGR234] gi|2496715|sp|P55579|Y4NG_RHISN RecName: Full=Uncharacterized protein y4nG gi|2182542|gb|AAB91786.1| conserved putative nucleotide sugar epimerase/dehydrogenase [Sinorhizobium fredii NGR234] Length = 396 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 19/144 (13%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP----A 58 LV G +G + LS ++ +RV DL P F+ L F I++ Sbjct: 52 ALVTGGSGYFGELLSKQLLRQGTYVRV----FDL-NPPGFSHPNLEFLKGTILDRNAVRQ 106 Query: 59 AYTAVDKA---------EDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLS 108 A + +DK E ++ +S+N G I + + GI +Y S+ VF Sbjct: 107 ALSGIDKVFHNVAQVPLAKEKDLFWSVNCGGTQIIVDESVATGIEKFVYTSSSAVFGAPK 166 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE 132 P+ E + NP YG++KLAGE Sbjct: 167 SNPVTEETEPNPAEDYGRAKLAGE 190 >gi|282880642|ref|ZP_06289348.1| NAD-binding domain 4 protein [Prevotella timonensis CRIS 5C-B1] gi|281305537|gb|EFA97591.1| NAD-binding domain 4 protein [Prevotella timonensis CRIS 5C-B1] Length = 331 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 29/176 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD---------------IDLLKPKDFAS 44 M L+ G +G + + S +Q +E+ RP +DL + Sbjct: 1 MNILITGASGFVGSFIVSEALQRGMEVWAAVRPSSSREYLQDKRIHFLTLDLSSTETLVK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTD 101 ++ D +++ A T AED F +N EG + A + +P IYIS+ Sbjct: 61 QLKDYAFDYVVHAAGITKSVHAED----FFKVNTEGTKHLVDALLQLRMPMKRFIYISSL 116 Query: 102 YVFDGLSRT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVY 151 VF + T I+E P YGKSKLA E+ + N+ YVI+R +Y Sbjct: 117 GVFGAIKDTMPYHEINEDDVPKPNTHYGKSKLAAEQYLDRIGNDFPYVIIRPTGIY 172 >gi|257416950|ref|ZP_05593944.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257158778|gb|EEU88738.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 330 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|307290707|ref|ZP_07570612.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] gi|306498236|gb|EFM67748.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] Length = 310 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 58 LCSVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSST 117 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL- 159 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ Sbjct: 118 AATYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVA 165 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 L +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 166 LRYFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|256762081|ref|ZP_05502661.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300860063|ref|ZP_07106151.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256683332|gb|EEU23027.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300850881|gb|EFK78630.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 329 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|288941681|ref|YP_003443921.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] gi|288897053|gb|ADC62889.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] Length = 323 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SR 109 P+ +I+ AAY V ++ +P + N G + +A IP I S+ G+ R Sbjct: 67 PEAVIHFAAYAYVGESVRDPGRYYRNNVAGTLTLLEAMRDHAIPHIVFSSTCATYGIPDR 126 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TPI E P P+N YG SKL E +A + + Sbjct: 127 TPITEDHPQRPINPYGASKLMVERMLADFEQAH 159 >gi|323480311|gb|ADX79750.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] Length = 329 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|256852723|ref|ZP_05558093.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|256711182|gb|EEU26220.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] Length = 329 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|187251448|ref|YP_001875930.1| dehydrogenase family protein [Elusimicrobium minutum Pei191] gi|186971608|gb|ACC98593.1| Dehydrogenase family protein [Elusimicrobium minutum Pei191] Length = 308 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 19/146 (13%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA +V ++ P+++ IN G + +AA + I+ S+ V+ Sbjct: 74 DYVIHLAALVSVAESMHNPQLSLEINIHGTANVLEAARLNKVKRFIFASSSAVYGNNPDA 133 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG---------SN 157 P E + TN + Y KLAG+E YT+ Y VILR +++FG S Sbjct: 134 PYQETAQTNIQSPYALGKLAGDELCQMYTDLYGLETVILR---YFNVFGPGQDADSPYSA 190 Query: 158 FLLSMLRLAKERREISVVCDQFGTPT 183 + + LAKE + ++ D GT T Sbjct: 191 VIAKFIALAKENKSYNIQWD--GTQT 214 >gi|307823714|ref|ZP_07653942.1| UDP-glucose 4-epimerase [Methylobacter tundripaludum SV96] gi|307735008|gb|EFO05857.1| UDP-glucose 4-epimerase [Methylobacter tundripaludum SV96] Length = 337 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F D +++ A++ V ++ +P + N + A S G+ I+ ST +F Sbjct: 66 FREHKFDAVMHFASFIQVGESMQDPAKYYQNNVVNTLNLLNAMRSHGVDKFIFSSTAAIF 125 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TPIDE P P+N YG SKL E+ +A Y Y Sbjct: 126 GEPEYTPIDEAHPKQPINPYGWSKLMVEQALADYDRAY 163 >gi|261878966|ref|ZP_06005393.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] gi|270334420|gb|EFA45206.1| conserved hypothetical protein [Prevotella bergensis DSM 17361] Length = 331 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 14/156 (8%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R+ ++DL K D I++ A T A++ F IN EG + A Sbjct: 44 RIHFLELDLSSEKTLMKQLDGHHFDYIVHAAGVTKCLHADE----FFKINYEGTVNLVHA 99 Query: 88 ADSIGIPC---IYISTDYVFDGL-SRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTN 140 + +P IYIST V+ + + P+ E ++ P YGKSKL E + S N Sbjct: 100 ILKLRMPMKRFIYISTLGVYGAIREQKPLREIEESDIPRPNTAYGKSKLKAERFLDSIGN 159 Query: 141 --NYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 NY++LR VY ++ L M++ K+ + SV Sbjct: 160 DFNYIVLRPTGVYGPREKDYFL-MVKSIKDHVDFSV 194 >gi|257420168|ref|ZP_05597162.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|257161996|gb|EEU91956.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 330 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|59710808|ref|YP_203584.1| UDP-glucose 4-epimerase [Vibrio fischeri ES114] gi|59478909|gb|AAW84696.1| UDP-glucose 4-epimerase [Vibrio fischeri ES114] Length = 335 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ PK + F D +I+ A AV ++ ++P + + N G + +A G+ Sbjct: 58 DIRDPKILETIFAENQIDSVIHFAGLKAVGESVEKPIMYYDNNVSGTLVLVEAMRKAGVN 117 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I + S+ V+ + TPI E PT+ N YG+SKL EE Sbjct: 118 SIVFSSSATVYGDPASTPIREDFPTSATNPYGRSKLMVEE 157 >gi|315026928|gb|EFT38860.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2137] Length = 310 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|294506605|ref|YP_003570663.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] gi|294342933|emb|CBH23711.1| UDP-glucose 4-epimerase [Salinibacter ruber M8] Length = 311 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 AS F D +++ AA V K+ ++P +N G + +A G+ ++ ST Sbjct: 58 ASLFTEHQYDCLVHHAAQMDVRKSVEDPSFDADVNVRGLLNLMEAGIGQGLRRVLFASTG 117 Query: 102 YVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 G TP DE P P++ YG +KLA E+ + Y + Y V LR A VY Sbjct: 118 GAIYGEPEYTPQDEKHPLRPVSPYGVAKLAAEKYLHYYQDQYEVETVSLRYANVYG 173 >gi|251771901|gb|EES52475.1| dTDP-glucose 4,6-dehydratase [Leptospirillum ferrodiazotrophum] Length = 366 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DS 90 D+ PK A FL P +++ AA + VD++ + P + N G + AA + Sbjct: 69 DIRDPKAVAELFLRHRPSGVLHLAAESHVDRSIESPGEFVATNVFGTFVLLDAALRYWER 128 Query: 91 IGIPC----IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G P +++STD V+ LS + P E +P P + Y SK A + V +Y + Y Sbjct: 129 EGRPGDFRFLHVSTDEVYGSLSPSDPPFRETTPYAPNSPYAASKAASDHFVRAYHHTY 186 >gi|237741020|ref|ZP_04571501.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] gi|229431064|gb|EEO41276.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] Length = 329 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A E+RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALEQREKISIYGDDYPTP 215 >gi|323140857|ref|ZP_08075770.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] gi|322414595|gb|EFY05401.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 42 FASFFL-SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 FA + F D +I+ AA + V ++ +P + N EG+ + +A G+ ++ S Sbjct: 57 FAKHIMEQFKIDAVIHFAASSLVGESMTDPAKYYFNNVEGSLHLLEAMRGAGVDRMVFSS 116 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 T V+ PI E S P N+YG++KLA E +A Y + Y + A Y Sbjct: 117 TAAVYGEPEAVPITEDSRLAPTNVYGRTKLAIEGMLADYDHAYDMRYVALRY 168 >gi|315147015|gb|EFT91031.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4244] Length = 319 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|253574886|ref|ZP_04852226.1| UDP-glucose 4-epimerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845932|gb|EES73940.1| UDP-glucose 4-epimerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 328 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I + +++++ Q E++ + G + DL A Sbjct: 1 MAILVTGGAGYIGSHTVAALLEQGREVVVIDNLQTGHREALLGGKLYEGDLRDKALLAKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + +I+ AA + V ++ +P F N G + A D + ++ ST + Sbjct: 61 FAENEIEAVIHFAANSLVGESMKDPVKYFDNNVYGTLCLLDAMDQANVRKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + PI+E PT P N+YG++KL E +A + YV LR Sbjct: 121 GEPEKVPIEESDPTRPTNVYGETKLTMERMMAWFDQVLGIKYVSLR 166 >gi|227354754|ref|ZP_03839172.1| UDP-N-acetylglucosamine 4-epimerase [Proteus mirabilis ATCC 29906] gi|227165197|gb|EEI50025.1| UDP-N-acetylglucosamine 4-epimerase [Proteus mirabilis ATCC 29906] gi|302378450|gb|ADL32285.1| Gne [Proteus mirabilis] Length = 316 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 36/171 (21%) Query: 5 VIGNNGQIAQSLSSMCVQD------VEIIR------------VGRPDIDLLKPKDFASFF 46 +IG +G I LS ++ V+I++ V RP+ LL+P Sbjct: 4 IIGGSGFIGTRLSGQLTKENIEFKIVDIVKSEKYPEKWVFGDVTRPE-SLLEPLK----- 57 Query: 47 LSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 DVIIN AA K P + + +N +GA I A+ + I I ++ Sbjct: 58 ---GSDVIINLAAQ---HKDNVHPISLYYEVNVDGAKNICDVAEQLNIKHIVFTSSVAVY 111 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-----TNNYVILRTAWVY 151 G E +P N YGKSKL E K ++ TN V++R V+ Sbjct: 112 GFVEKETGEDGEFHPFNDYGKSKLEAEHKYETWYKKDNTNTLVVIRPTVVF 162 >gi|126657358|ref|ZP_01728517.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] gi|126621345|gb|EAZ92057.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] Length = 333 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 VE+I D LLK F +S D +++ AA+ V ++ EP+ + N Sbjct: 52 VELIIGDLGDRSLLK-----DIFKQYSIDAVMHFAAFAYVGESIKEPQKYYRNNVANTLT 106 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-- 140 + +A + I + S+ G+++ +PI E P NP+N YG SKL E+ + ++ Sbjct: 107 LLEAMKATSINKLVFSSTCATYGVAQFSPITEQHPQNPINPYGASKLMVEQILKDFSKAY 166 Query: 141 --NYVILR 146 NYV R Sbjct: 167 DLNYVCFR 174 >gi|16126622|ref|NP_421186.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|221235402|ref|YP_002517839.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] gi|13423916|gb|AAK24354.1| UDP-glucose 4-epimerase [Caulobacter crescentus CB15] gi|220964575|gb|ACL95931.1| UDP-glucose 4-epimerase [Caulobacter crescentus NA1000] Length = 327 Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 + F + +P +++ AA V ++ P F N G + +AA G+ ++ ST Sbjct: 60 AVFAAHAPVAVLHFAARIEVGESVKNPGAFFDNNVGGTITLIEAARRAGVNAMVFSSTCA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 F P+ E P PLN YG+SKL E+ +A Y + YV ++A Sbjct: 120 TFGDPVHLPMAEDHPQAPLNPYGRSKLMVEQALADY-DRYVGFKSA 164 >gi|332522716|ref|ZP_08398968.1| NAD dependent epimerase/dehydratase family protein [Streptococcus porcinus str. Jelinkova 176] gi|332313980|gb|EGJ26965.1| NAD dependent epimerase/dehydratase family protein [Streptococcus porcinus str. Jelinkova 176] Length = 282 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 23/209 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP--KDFASFFLSFSP-DVIINPA 58 K L+ G N I S Q +V +D++ P ++F F+P D I + A Sbjct: 3 KVLITGANSYIGTSFEKWLQQSEGEYKVD--TLDMISPTWREF-----DFTPYDCIFHVA 55 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSP 117 A ++ + +P++ +N E +A A G+ I++S+ V+ G + I+ + Sbjct: 56 AIVHKNEKKIDPDLYQKVNTELPIELANLAKEAGVQQFIFLSSMSVY-GSKESIINRATK 114 Query: 118 TNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P YGKSKLA E + + S T N +I+R VY + + +LAK ++ Sbjct: 115 EEPSTYYGKSKLAAEIGLKALESDTFNVLIMRPPMVYGPKATGNYARLSKLAK----VTP 170 Query: 175 VCDQFGTPTSALQIARAI----IQIAHNL 199 + + G S + I + + I HNL Sbjct: 171 IFPKIGNQRSMIYIDNLLEFVRLAIEHNL 199 >gi|326486453|gb|ADZ76281.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni] Length = 324 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL AS F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLASVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNIVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|312110507|ref|YP_003988823.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] gi|311215608|gb|ADP74212.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] Length = 328 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F D +I+ AA + V ++ EP + N G + + + G+ I + ST V+ Sbjct: 61 FRKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNEFGVKQIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGS 156 + PI E PT P N YG++KLA E+ + +Y Y+ LR V +G+ Sbjct: 121 GEPKQIPIVETDPTMPTNTYGETKLAMEKMMKWVDRAYGIRYISLRYFNVAGAYGT 176 >gi|312952423|ref|ZP_07771294.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0102] gi|310629622|gb|EFQ12905.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0102] Length = 292 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 32 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 91 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 92 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 139 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 140 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 189 >gi|292655326|ref|YP_003535223.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] gi|291372530|gb|ADE04757.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] Length = 315 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 24/175 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII---------RVGRPD------IDLLKPKDFASFF 46 + LV G G + L++ +D ++ R PD D+ P D A Sbjct: 9 RVLVTGGAGLVGSHLAAHLSEDNYVVVADDLSKGDREQVPDGVEFVQADMTDPDDVAEA- 67 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFD 105 ++ D++ + AAYT D P F N E + + +G+ I + S+ ++ Sbjct: 68 VTEDLDIVFHFAAYT--DTNYGNPRQLFEENTEMTYNVLERMQEVGVSDIAFTSSSTIYG 125 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSN 157 R ++++P P++IYG SKLA E ++++ ++Y T ++Y +I G N Sbjct: 126 EAPRPTPEDYAPLEPISIYGSSKLADEGLLSTFAHSYDF--TVYMYRFANIVGPN 178 >gi|316935553|ref|YP_004110535.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris DX-1] gi|315603267|gb|ADU45802.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris DX-1] Length = 337 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 29/190 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V + +P + N + ++ AA G+ I+ ST V+ R Sbjct: 68 DAIIHFAGSVIVSDSMRDPLGYYRNNTSTSRSLLSAAVRRGVKKFIFSSTAAVYGNPDRV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFL------- 159 P+ E +PT PL+ YG+SKL E + +Y NYV LR +++ G++ L Sbjct: 128 PVGEDAPTRPLSPYGRSKLMTEIMLHDAAEAYGVNYVALR---YFNVAGADPLGRLGLAT 184 Query: 160 ---LSMLRLAKE-----RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 +L++A E R I V + TP + R I + +L E +L Sbjct: 185 VGATHLLKIAVEAATGQRSRIDVYGTDYPTPDGS--CIRDFIHVT-DLAEAHGAALG--- 238 Query: 212 HMTADGGPVS 221 ++ A GGPV+ Sbjct: 239 YLRAGGGPVT 248 >gi|197334181|ref|YP_002154963.1| UDP-glucose 4-epimerase [Vibrio fischeri MJ11] gi|197315671|gb|ACH65118.1| UDP-glucose 4-epimerase [Vibrio fischeri MJ11] Length = 335 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ PK + F D +I+ A AV ++ ++P + + N G + +A G+ Sbjct: 58 DIRDPKILETIFAENQIDSVIHFAGLKAVGESVEKPIMYYDNNVSGTLVLVEAMRKAGVN 117 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I + S+ V+ + TPI E PT+ N YG+SKL EE Sbjct: 118 SIVFSSSATVYGDPASTPIREDFPTSATNPYGRSKLMVEE 157 >gi|294505715|ref|YP_003569775.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294352121|gb|ADE72444.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 274 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 34/230 (14%) Query: 1 MKCLVIGNNGQIAQSLSS--MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS-------- 50 MK L++G G ++ M + ++ R PKD +L + Sbjct: 1 MKLLILGGKGMAGHVITRYFMLNSNYDVSYTSRD------PKDENGIYLDITNFKRLEET 54 Query: 51 -----PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 PD+IIN + A + P AF IN+ +AK + I+ISTD VF Sbjct: 55 VDAIKPDIIINCIGVLN-EHASNNPMRAFQINSLLPHQLAKLIERYQGKLIHISTDCVFL 113 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G S+ E + ++Y +SK GE N ++ +RT+ + + + L Sbjct: 114 G-SKGDYTENDSPDGTSVYAQSKQLGE----IVDNKHLTIRTSIIGPELKEDGIGLFLWF 168 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 K+ I F + L++A+A+ LIEN+ T G++H+ + Sbjct: 169 MKQEGIIKGYKKVFWNGVTTLELAKAV----EFLIENNVT---GLYHLHS 211 >gi|311404566|gb|ADP94226.1| TunF [Streptomyces chartreusis] Length = 327 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 16/156 (10%) Query: 1 MKCLVIGNNGQIAQ-SLSSMCVQDVEIIRV-----GRPD---------IDLLKPKDFASF 45 M+ LV G G + ++ + E++ V GR + +D+L + Sbjct: 1 MRVLVTGGAGYVGSFTVRRLLAAGHEVVVVDNLSTGRREAVRGCRLHVVDILDIASMGTV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F F P+ +I+ AA + +++ + FS+N G + G+ ++ S+ V+ Sbjct: 61 FEEFHPEAVIHFAALKSSEESLRDINTYFSVNLTGTQNVLALCARTGVERFVFSSSCAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 P+DE +P P + YG++K E +ASY Sbjct: 121 GTPQICPVDETAPVRPESPYGETKYLCERVIASYAQ 156 >gi|315649765|ref|ZP_07902848.1| dTDP-glucose 4,6-dehydratase [Paenibacillus vortex V453] gi|315274739|gb|EFU38120.1| dTDP-glucose 4,6-dehydratase [Paenibacillus vortex V453] Length = 340 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ EPEI + N G + AA G+ + +STD V+ L T Sbjct: 75 DVVVNFAAESHVDRSILEPEIFVNTNVMGTQVLLDAAKKYGVTKFVQVSTDEVYGSLGDT 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK G+ + +Y + Sbjct: 135 GLFSETTPLAPNSPYSASKAGGDLLIRAYHETF 167 >gi|261418019|ref|YP_003251701.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|319767167|ref|YP_004132668.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] gi|261374476|gb|ACX77219.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|317112033|gb|ADU94525.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] Length = 328 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 17/163 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ +DF F + II+ AA + V ++ +EP + N G + + G+ Sbjct: 51 IRDRDFLREVFRQHDIEAIIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQ 110 Query: 96 I-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWV 150 I + ST V+ + PI E PT P N YG++KLA E+ + +Y + LR V Sbjct: 111 IVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNV 170 Query: 151 YSIFG----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 +G ++ + +L++ +R EI + D + TP Sbjct: 171 AGAYGTTIGEDHNPETHLIPLILKVPLGQREEIYIFGDDYDTP 213 >gi|315164287|gb|EFU08304.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1302] Length = 274 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 24 SIFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 83 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 84 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 131 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 132 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 181 >gi|300024231|ref|YP_003756842.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans ATCC 51888] gi|299526052|gb|ADJ24521.1| NAD-dependent epimerase/dehydratase [Hyphomicrobium denitrificans ATCC 51888] Length = 324 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 23/132 (17%) Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNF 158 V DG+ + E +P NP N YG+SK+A E E + + + +LR VY Sbjct: 125 VHDGI----VTEDTPANPTNAYGRSKIAAEALTAELLGGSSTQWTVLRPVLVYGSGVRGN 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL-----RGIFHM 213 + +++RLA + P +A++ R+++ I+ NLI + L R + Sbjct: 181 MATLMRLA---------ASPYPLPFAAMKGRRSLLSIS-NLIAAIEHVLQAEAARDATFI 230 Query: 214 TADGGPVSWADF 225 AD PV+ AD Sbjct: 231 VADSAPVTIADM 242 >gi|300781371|ref|ZP_07091225.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] gi|300533078|gb|EFK54139.1| UDP-glucose 4-epimerase [Corynebacterium genitalium ATCC 33030] Length = 309 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 19/161 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD-------IDLLK----PKDFA 43 M+ LV G G I L V + V GR + ++L++ K A Sbjct: 1 MRTLVTGGAGFIGSHLVDQLVMAGHEVAVLDNLSSGRLENISHQTAVELVEGDVGDKGLA 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY--ISTD 101 +P+VI + AA V K+ ++P + N G +A+AA G+ I S Sbjct: 61 DVVDKLAPEVIFHLAAQIDVRKSVEDPILDAQANILGTINVAEAARKAGVRKIVHTSSGG 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ S P+DE P +P + Y SKLAGE+ + Y + Y Sbjct: 121 SIYGTPSEFPVDESFPVDPHSPYAASKLAGEQYLGIYRHLY 161 >gi|148656517|ref|YP_001276722.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148568627|gb|ABQ90772.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 313 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 19/173 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV------GR--------PDIDLLKP--KDFASF 45 LV G G I L ++ E +RV GR DI+L++ +DF + Sbjct: 3 HVLVTGGAGFIGSHLVEALLRRGERVRVFDNFSTGRHENVKHLHDDIELIEGDLRDFDAV 62 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + + +V+ + AA +V ++ D+P ++N G + AA G+ ++ S+ V Sbjct: 63 RRAVAGVEVVFHQAALASVQRSVDDPMTTNAVNVTGTLHVLMAARDAGVRRVVFASSSSV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 + P E PL+ Y SKLAGE+ +++ Y + A Y ++FG Sbjct: 123 YGDTPTLPKVETQAPQPLSPYAVSKLAGEQYCMAFSVVYGLPSIALRYFNVFG 175 >gi|149912948|ref|ZP_01901482.1| UDP-glucose 4-epimerase [Roseobacter sp. AzwK-3b] gi|149813354|gb|EDM73180.1| UDP-glucose 4-epimerase [Roseobacter sp. AzwK-3b] Length = 327 Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F ++ P+ +++ AA + V ++ EP + + N G+ + +AA G + Sbjct: 51 DLTDRARLDQVFAAYRPEAVLHFAALSQVGESMREPGLYWHNNVAGSLCLFEAAVQAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE S NP+N YG SK A E+ + A++ +VI R Sbjct: 111 KVVFSSTCATYGDQDNVVLDETSDRNPINAYGGSKRAIEDILRDFEAAHGLRHVIFR 167 >gi|311744539|ref|ZP_07718339.1| GDP-mannose 4,6-dehydratase [Aeromicrobium marinum DSM 15272] gi|311312158|gb|EFQ82075.1| GDP-mannose 4,6-dehydratase [Aeromicrobium marinum DSM 15272] Length = 337 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 6/139 (4%) Query: 10 GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 G + LSS+ + V D DLL F FSP + N AA++AV + + Sbjct: 34 GTVRPGLSSIARMGPYLTGVQVVDHDLLDTTGFGDLLSRFSPRAVYNLAAFSAVGASWSD 93 Query: 70 PEIAFSIN----AEGAGAIAKAAD--SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 PE+ N AE + + D S + S+ VF + +DE +P P Sbjct: 94 PELVARTNLVAVAEMLETLLRHRDKNSSDVRFFQASSAEVFGSRVQGALDEETPHRPRTP 153 Query: 124 YGKSKLAGEEKVASYTNNY 142 Y +K A V SY ++ Sbjct: 154 YAVAKSAAHHLVISYREHH 172 >gi|257083962|ref|ZP_05578323.1| UDP-glucose 4-epimerase [Enterococcus faecalis Fly1] gi|256991992|gb|EEU79294.1| UDP-glucose 4-epimerase [Enterococcus faecalis Fly1] Length = 232 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 48 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 107 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 108 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 155 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 156 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 205 >gi|315171223|gb|EFU15240.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1342] Length = 226 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 20 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 79 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 80 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 127 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 128 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 177 >gi|271962806|ref|YP_003337002.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] gi|270505981|gb|ACZ84259.1| UDP-glucose 4-epimerase [Streptosporangium roseum DSM 43021] Length = 321 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 14/185 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDIDLLKPKDFASFFLSFSPDV- 53 MK LV G G I +++ V+ + V G D + F ++ + DV Sbjct: 1 MKLLVTGGAGYIGSVVAAQLVEAGHQVTVLDDLSTGHADA-VPAGARFVEGSVTEAADVL 59 Query: 54 -----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 +++ AA + V ++ + P + ++ N G ++ A + G+ ++ ST + Sbjct: 60 PGMDGVLHFAAKSLVGESVERPGLYWAHNLGGTLSLLDAMRTAGVGRIVFSSTAATYGEP 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 R+P+ E PT P N YG SKLA + + ++ Y + + Y G R+ + Sbjct: 120 ERSPVVETDPTRPTNPYGASKLAVDTALTTFAGMYGLAAVSLRYFNVGGAHTGGDGRVYR 179 Query: 168 ERREI 172 ER + Sbjct: 180 ERHTV 184 >gi|33864169|ref|NP_895729.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9313] gi|33635753|emb|CAE22078.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9313] Length = 340 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + P+V++N AA V + + P N G G I + G+ +Y S+ V Sbjct: 76 LFKAEKPEVVVNLAAQAGVRYSLENPAAYIQANLVGFGHILEGCRHHGVQHLVYASSSSV 135 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNF 158 + G P E P N P+++Y +K A E +Y++ Y + LR VY +G Sbjct: 136 YGGNRNLPFHEQQPVNHPVSLYAATKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRPD 195 Query: 159 LLSML 163 + ML Sbjct: 196 MAPML 200 >gi|283781944|ref|YP_003372699.1| UDP-glucose 4-epimerase [Pirellula staleyi DSM 6068] gi|283440397|gb|ADB18839.1| UDP-glucose 4-epimerase [Pirellula staleyi DSM 6068] Length = 327 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA+ V ++ P + + N G+ + +A + G+ I+ ST +F +T Sbjct: 67 DAVLHYAAFALVGESVGNPAMYYHNNVIGSYHLLEAMRASGVQNLIFSSTTAIFGEPEKT 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E P P+N YG +KL E + Y Y Sbjct: 127 PIAEHFPKQPINPYGFTKLVMERMLDDYAQAY 158 >gi|325689856|gb|EGD31860.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK115] Length = 347 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|300784321|ref|YP_003764612.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] gi|299793835|gb|ADJ44210.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] Length = 326 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 34/243 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDLLK--PKDFASFFL 47 +K +V G G + ++ V+ V+ + G PD ++ + A L Sbjct: 8 LKLVVTGGAGYVGSVCAARLVEAGHQVTVVDDLSTGHADAVHPDARFIEGDAAEVAGSLL 67 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 D +++ AA + V ++ EP + N + + +A G P ++ ST + Sbjct: 68 REGFDGVLHFAAKSLVGESMTEPAKYWEGNVVTSLRLLEAMQEHGTPRLVFSSTAATYGE 127 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFG---- 155 ++PI E +PT P N YG +KLA + + S+ + V LR A Y FG Sbjct: 128 PEQSPIPETAPTRPTNTYGATKLAIDAAITSFAVAHGLAAVSLRYFNVAGAYGAFGERHT 187 Query: 156 --SNFLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 ++ + +L++A RE I + D + TP A+ H +++ +D L + H Sbjct: 188 TETHLIPLVLQVATGDRERIQIFGDDYPTPDHT-----AVRDYIH-VVDLADAHLLALKH 241 Query: 213 MTA 215 TA Sbjct: 242 ATA 244 >gi|312880524|ref|ZP_07740324.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260] gi|310783815|gb|EFQ24213.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260] Length = 301 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 19/202 (9%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 RP +D S PDV++N ++P A ++NA+ I+ + Sbjct: 54 RPHVDAADFDTVIRALASVQPDVVVNCIGLIKQLPLAEDPLTAITVNAQLPHRISLICRA 113 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I I TD VFDG +R E P++ ++YG++K GE +Y + + LRT+ + Sbjct: 114 AKARMIQIGTDCVFDG-TRGGYREDDPSDAKDLYGRTKYLGE---VTYPHC-ITLRTSII 168 Query: 151 YSIFGSNFLLSMLRLAKE---RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 L LA++ R + TP A +A ++ L Sbjct: 169 GHELKGRLSLVEWFLAQKAPVRGYTRALYSGLTTPELARVVADYVL---------PHPEL 219 Query: 208 RGIFHMTADGGPVSWADFAEYI 229 G++H++ D P+S D + Sbjct: 220 NGLYHLSVD--PISKYDLLRLL 239 >gi|323703699|ref|ZP_08115340.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531352|gb|EGB21250.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ F D +++ AAY+ V ++ EP + N G + + S G Sbjct: 48 EVDINDKPSLEQVFQKQKIDAVMHFAAYSLVGESVVEPAKYYHNNVLGTLNLMEVMLSYG 107 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + I+ ST V+ PI E PT P N YG +KLA E + +Y NYV LR Sbjct: 108 VKRIIFSSTAAVYGEPVELPITEEHPTRPTNPYGATKLAVEGMLHWFGQAYGLNYVSLR 166 >gi|288921267|ref|ZP_06415551.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288347357|gb|EFC81650.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 329 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P+ A+ +S D + + AA T V ++ + P F+ N G + A D+ G Sbjct: 50 DLLEPRQLAAAGVSRGFDGVCHLAALTRVRESRETPLRYFAANVTGTINLLAALDA-GTR 108 Query: 95 CIYISTDYVF--------DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NY 142 ++ +VF DG + +PI E P + YG SKLA E+ VA Sbjct: 109 ATGLAPRFVFGSSCAVYGDGGT-SPIPETRAAAPTSPYGASKLAAEQAVAYQAATGRLGA 167 Query: 143 VILRTAWVYSIFGSN 157 V+LR+ V GS+ Sbjct: 168 VVLRSFNVAGAVGSH 182 >gi|307286875|ref|ZP_07566957.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] gi|306502090|gb|EFM71376.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] Length = 310 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SIFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|300811801|ref|ZP_07092272.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497217|gb|EFK32268.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 357 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 17/150 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV+G G I V D ++ + G + +DLL A Sbjct: 29 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDPKAKFYQVDLLDKDAVAD 88 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ Sbjct: 89 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 148 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEE 133 G+ + PI E +P NP+N YG++K+ E+ Sbjct: 149 YGIPEKLPITEETPLNPINPYGETKMMMEK 178 >gi|327469498|gb|EGF14967.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK330] Length = 347 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQEYGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|323703743|ref|ZP_08115382.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531267|gb|EGB21167.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+L +D F D +++ AA++ V ++ +P + N G + +A + Sbjct: 50 DILDKRDLQLVFHQNRIDAVMHFAAFSIVGESVQQPSTYYRNNVAGTLNLLEAMQEHRVN 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 I+ ST V+ PI E T P N YG +KLA EE + +Y YV LR Sbjct: 110 KLIFSSTAAVYGEPKEIPITEDHQTKPTNPYGATKLAVEEMLKWFSQAYGLKYVSLR 166 >gi|307268523|ref|ZP_07549897.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] gi|306515154|gb|EFM83695.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] Length = 320 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|227551782|ref|ZP_03981831.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] gi|227179087|gb|EEI60059.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] Length = 377 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 108 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 109 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 168 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 + +PI E +PTNP N YG+SKL E+ + +Y YV LR Sbjct: 169 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALR 215 >gi|256375600|ref|YP_003099260.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] gi|255919903|gb|ACU35414.1| UDP-glucose 4-epimerase [Actinosynnema mirum DSM 43827] Length = 320 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 34/243 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI-----DLLKPK--DFASFFL 47 MK LV G G + ++ V+ ++ + G D + ++ D L Sbjct: 1 MKLLVTGGAGYVGSVTAARLVESGHEVVVLDDLSTGHADAVPEGAEFVQADIDDAIGDVL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + D I++ AA + V ++ +P + N + + A + G P ++ ST + Sbjct: 61 AGGFDGIVHCAAKSLVGESMVDPAKYWQGNVVTSLKLLDAMRAHGTPRLVFSSTAATYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFG---- 155 + PI E +PT P N YG SKLA + + SY + V LR A Y FG Sbjct: 121 PEQVPILETAPTRPTNTYGASKLAIDHAITSYAAAHGLAAVSLRYFNVAGAYGRFGERHA 180 Query: 156 --SNFLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 ++ + +L++A +RE I V D + PT R I + ++ +D ++ + H Sbjct: 181 VETHLIPLVLQVALGKRESIKVFGDDW--PTDDGTCVRDYIHV----LDLADAHMKALEH 234 Query: 213 MTA 215 TA Sbjct: 235 ATA 237 >gi|15789397|ref|NP_279221.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|169235109|ref|YP_001688309.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Halobacterium salinarum R1] gi|10579717|gb|AAG18701.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|167726175|emb|CAP12948.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Halobacterium salinarum R1] Length = 328 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 19/162 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 C + ++G + L V+D E++ D+D + + A Sbjct: 49 CQNLADDGDGSYRLVEGDVRDAELVEELVADVDY-----------------VYHQAGQAG 91 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL 121 V + ++P +N +G + AA I ++ S+ V+ P DE PT P+ Sbjct: 92 VRPSVEDPRKYNEVNVDGTLNVLDAARKTEIERVVFASSSSVYGKPEYLPYDEVHPTTPV 151 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 + YG SKLA E V +Y+ Y + A Y +++G +M Sbjct: 152 SPYGASKLAAERYVCAYSEVYDLPTVALRYFTVYGPRMRPNM 193 >gi|312143002|ref|YP_003994448.1| dTDP-glucose 4,6-dehydratase [Halanaerobium sp. 'sapolanicus'] gi|311903653|gb|ADQ14094.1| dTDP-glucose 4,6-dehydratase [Halanaerobium sp. 'sapolanicus'] Length = 321 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYV 103 FF +++IN AA + VDK+ EP I N +G + A G+ + ISTD V Sbjct: 69 FFREMEFELVINFAAESHVDKSITEPVIFLESNVKGTQVLLDACKKFGVKKFHQISTDEV 128 Query: 104 FDGL----SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + L E S NP + Y SK A + V SY Y Sbjct: 129 YGSLPLEKKELKFTEQSVLNPSSPYSASKAAADLLVKSYYKTY 171 >gi|55377692|ref|YP_135542.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55230417|gb|AAV45836.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 308 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 6/120 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL P A S D++++ AA VD D P F N++ I + G Sbjct: 53 DGDLTDPGAVAEAITS-DVDLVVHLAASKLVDT--DTPRRQFEDNSDITYNILEQMQEAG 109 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ++ S+ V+ R ++++P P+++YG +KLA E V++Y +++ I +WV+ Sbjct: 110 VENLVFTSSSTVYGEAPRPTPEDYAPLEPISVYGATKLAEESLVSTYAHSHDI--QSWVF 167 >gi|332360353|gb|EGJ38165.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK49] Length = 342 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|332707867|ref|ZP_08427885.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] gi|332353364|gb|EGJ32886.1| nucleoside-diphosphate-sugar epimerase [Lyngbya majuscula 3L] Length = 239 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 23 DVEIIRVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 D E R+GR ++ DLL+ + ++ V A Y A A+ ++ + +N Sbjct: 47 DTEKRRIGRIELFEGDLLQHETIEQA-VAGCEHVYHVAALYRA---AKHPDQLYWDVNVG 102 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G A+ +A G+ ++ ST V G+ P +E SP P +IY ++KLA E+ V Sbjct: 103 GTSAVVEACRQHGVARLLHCSTIGVHGGVEEVPANEQSPFAPSDIYQRTKLAAEQCVQQS 162 Query: 139 TNN---YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI 188 + I+R A +Y G L + L K R I FG+ + L + Sbjct: 163 QSQGLPVTIVRPAGIYGP-GDMRFLKLFTLVKTGRFI-----MFGSGQTLLHL 209 >gi|325694391|gb|EGD36303.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK150] Length = 347 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|312908463|ref|ZP_07767418.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|310625567|gb|EFQ08850.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|315029006|gb|EFT40938.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4000] Length = 319 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|257052193|ref|YP_003130026.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690956|gb|ACV11293.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 332 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 50/106 (47%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D++++ AA + VD D ++A+ N G +A G ++ + V P Sbjct: 79 DIVMHLAAVSGVDDCGDNADLAYETNVVGTHNVAWFCRQTGAALVFPFSMAVLGDPQSFP 138 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 I P +P+N YG++K+ GE+ + +Y + +++GS+ Sbjct: 139 ITVEQPRDPMNWYGRTKVLGEQAIQTYADGAFPAHLFLKSNLYGSH 184 >gi|147900991|ref|NP_001088301.1| TDP-glucose 4,6-dehydratase [Xenopus laevis] gi|54038062|gb|AAH84333.1| LOC495137 protein [Xenopus laevis] Length = 351 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLS 108 +++++ AA T VD + + +N G + AA G +YISTD V+ G Sbjct: 90 NIVLHFAAQTHVDLSFFQSFKFAYVNTYGTNILLNAAHGHGAGVEKFVYISTDEVYGGSL 149 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V S+ + VI R++ VY Sbjct: 150 NEEFDETSPKRPTNPYASSKAAAESFVLSFWERHKFPVVITRSSNVY 196 >gi|307324300|ref|ZP_07603508.1| UDP-glucose 4-epimerase [Streptomyces violaceusniger Tu 4113] gi|306890031|gb|EFN21009.1| UDP-glucose 4-epimerase [Streptomyces violaceusniger Tu 4113] Length = 342 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A +L + D +++ AA++ V ++ PE + N G + A G+ ++ ST Sbjct: 61 AGKWLDPTFDGVLHFAAFSQVGESVVNPEKYWVNNVGGTTELLAAMRDAGVRTLVFSSTA 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + + PI E PT P N YG SKLA + + A++ V LR A Y + Sbjct: 121 ATYGEPDQVPITEDLPTAPTNPYGASKLAVDHMISGECAAHGLAAVSLRYFNVAGAYGAY 180 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G S+ + +L++A+ RRE ISV + + TP Sbjct: 181 GERHDPESHLIPLVLQVAQGRREAISVFGEDYPTP 215 >gi|290580653|ref|YP_003485045.1| UDP-galactose 4-epimerase [Streptococcus mutans NN2025] gi|254997552|dbj|BAH88153.1| UDP-galactose 4-epimerase [Streptococcus mutans NN2025] Length = 333 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F S +PDV +I+ AAY+ V ++ +P F N G + + G+ Sbjct: 53 LADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAW 149 I S+ G+ + PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 YIVFSSTAATYGIPNEIPIKETTPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHSPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|293389039|ref|ZP_06633518.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|312910521|ref|ZP_07769364.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] gi|291081615|gb|EFE18578.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|311289183|gb|EFQ67739.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] Length = 319 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|329577490|gb|EGG58932.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1467] Length = 320 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKRIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|318061251|ref|ZP_07979972.1| UDP-glucose 4-epimerase [Streptomyces sp. SA3_actG] gi|318075766|ref|ZP_07983098.1| UDP-glucose 4-epimerase [Streptomyces sp. SA3_actF] Length = 323 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ L D +++ AA + V ++ ++PE + N G A+ A GI ++ ST Sbjct: 57 AAALLPDGLDGVLHFAASSQVGESVEKPEKYWGNNVGGTRALLDAMREKGIGRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIF 154 + TPI E PT P + YG +KLA + +A + V LR A Y F Sbjct: 117 ATYGEPVNTPIVETDPTIPTSPYGNTKLAVDHMIADECRAHGLAAVSLRYFNVAGAYGDF 176 Query: 155 G------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 G S+ + +L++A+ RR +SV + + TP Sbjct: 177 GERHDPESHLIPIVLQVAQGRRAAVSVFGEDYATP 211 >gi|238019552|ref|ZP_04599978.1| hypothetical protein VEIDISOL_01421 [Veillonella dispar ATCC 17748] gi|237864251|gb|EEP65541.1| hypothetical protein VEIDISOL_01421 [Veillonella dispar ATCC 17748] Length = 329 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA++ V ++ P I + N G+ + ++A + G+ ++ ST V+ PI Sbjct: 69 VMHFAAHSQVGESMVNPAIYYENNVVGSYHLIESARTAGVKHFVFSSTAAVYGEPEVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E +P +P N+YG++KL EE ++ Y+ + YV LR Sbjct: 129 REDAPLHPTNVYGRTKLMIEEMLSDYSAIYGSTYVALR 166 >gi|37520037|ref|NP_923414.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] gi|35211029|dbj|BAC88409.1| dTDP-glucose 4-6-dehydratase [Gloeobacter violaceus PCC 7421] Length = 360 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DS 90 D+ P+ A F P I+N AA + VD++ P+ N +G + +AA Sbjct: 61 DICDPELIAQLLARFRPRYIVNFAAESHVDRSIHSPDAFVKTNVDGVFLLLEAALHHWKQ 120 Query: 91 IGIP------CIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P + +STD V+ LS + E +P P + Y SK AG+ V +Y Y Sbjct: 121 LTQPEVEDFRFLQVSTDEVYGSLSAEESAFSETTPYRPNSPYAASKAAGDHLVRAYHRTY 180 >gi|325696624|gb|EGD38513.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK160] Length = 333 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTSGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|315167711|gb|EFU11728.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1341] Length = 310 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|303247646|ref|ZP_07333916.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] gi|302490918|gb|EFL50815.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans JJ] Length = 297 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 20/156 (12%) Query: 1 MKCLVIGNNGQIAQSLS-----------SMCVQDVEIIRVGRPDIDL------LKPKDF- 42 M+ LV+G G + +L+ + ++ E +R P+ L L+ +D Sbjct: 1 MRILVLGATGMLGHALTFALSRRPGLDVTGAARNPERLRGQAPEAFLARLRGGLEARDIE 60 Query: 43 --ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 A+ + DV+IN +P +NA + + + G I+IST Sbjct: 61 TVAATMDAVRADVVINAVGLIRQLPEGRQPLPCIEVNARLPHQLLELCRARGARLIHIST 120 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 D VFDG +P E P ++YG SK GE + A Sbjct: 121 DCVFDGHKGSPYVEEDPPTARDVYGLSKYLGEVREA 156 >gi|331083202|ref|ZP_08332318.1| hypothetical protein HMPREF0992_01242 [Lachnospiraceae bacterium 6_1_63FAA] gi|330404591|gb|EGG84131.1| hypothetical protein HMPREF0992_01242 [Lachnospiraceae bacterium 6_1_63FAA] Length = 626 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PD++ + AA+ V ED P A N G IAKAA G+ + ISTD Sbjct: 367 TVFEKYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKIAKAASEYGVKRFVLISTD- 425 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G SK E V S+ I +T +V FG+ Sbjct: 426 -------------KAVNPTNIMGASKRLCEMIVQSFDK---ISKTEFVAVRFGN 463 >gi|104781549|ref|YP_608047.1| UDP-glucose 4-epimerase [Pseudomonas entomophila L48] gi|95110536|emb|CAK15244.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Pseudomonas entomophila L48] Length = 320 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 11/153 (7%) Query: 1 MKCLVIGNNGQIAQSL--------SSMCVQDVEIIRVG--RPDIDLLKPKDFASFFLSFS 50 M LV+G G I + + V D R G +D+ + + Sbjct: 1 MNFLVVGGAGYIGSHMVKHLLWANHQVVVADTAPTRPGIHWVQLDIANVHALDTLLAEYR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR 109 D + + A+Y V ++ +P + N + +A GI ++ ST V+ Sbjct: 61 FDAVFHFASYIQVGESVADPGKYYQNNVAATLTLLQAMVRAGIDKLVFSSTAAVYGDPVA 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TPIDE P P+N YG+SK E+ +A + Y Sbjct: 121 TPIDEEHPKAPINPYGRSKWMVEQLLADFDRAY 153 >gi|24379341|ref|NP_721296.1| UDP-galactose 4-epimerase, GalE [Streptococcus mutans UA159] gi|24377266|gb|AAN58602.1|AE014930_4 UDP-galactose 4-epimerase, GalE [Streptococcus mutans UA159] Length = 354 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F S +PDV +I+ AAY+ V ++ +P F N G + + G+ Sbjct: 74 LADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVK 133 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 134 YIVFSSTAATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLR--- 190 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 191 YFNVAGAKPDGSIGEDHSPETHLLPIILQVAQGVREKIMIFGDDYNTP 238 >gi|315156972|gb|EFU00989.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0043] Length = 310 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|333026413|ref|ZP_08454477.1| putative UDP-glucose 4-epimerase [Streptomyces sp. Tu6071] gi|332746265|gb|EGJ76706.1| putative UDP-glucose 4-epimerase [Streptomyces sp. Tu6071] Length = 323 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ L D +++ AA + V ++ ++PE + N G A+ A GI ++ ST Sbjct: 57 AAALLPDGLDGVLHFAASSQVGESVEKPEKYWGNNVGGTRALLDAMREKGIGRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIF 154 + TPI E PT P + YG +KLA + +A + V LR A Y F Sbjct: 117 ATYGEPVNTPIVETDPTIPTSPYGNTKLAVDHMIADECRAHGLAAVSLRYFNVAGAYGDF 176 Query: 155 G------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 G S+ + +L++A+ RR +SV + + TP Sbjct: 177 GERHDPESHLIPIVLQVAQGRRAAVSVFGEDYATP 211 >gi|126665188|ref|ZP_01736171.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter sp. ELB17] gi|126630558|gb|EBA01173.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter sp. ELB17] Length = 289 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/236 (22%), Positives = 90/236 (38%), Gaps = 12/236 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I+N + A++ P+ A+ + A I + +ST Y+FDG +T Sbjct: 52 DLIVNALWLADPESAQEYPDDVKRAALSLPLALGEFARDRNIAMLQLSTCYIFDGRKQTA 111 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +P P+N G + E+ + ++ILRT W F S A R Sbjct: 112 YIASNPGQPVNQLGAWQWECEQGLRGLLTRHIILRTGWSLGRFIRKVQAST--AAGTRLS 169 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + C G P + +AR + I L + + G + G +S + I Sbjct: 170 LPGRC--VGQPLAVTDLARVMRAIIQQL--DCGAEVWGTYQYAGSEG-ISLYELGLAI-- 222 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G P + + P + L C+K+ NT I+ W+ G+ + L Sbjct: 223 -AGLPGIPED--LHLVDEVSGWGQLEPVNTRLVCTKIRNTFGIKQVPWRVGLTDEL 275 >gi|121533488|ref|ZP_01665316.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] gi|121308047|gb|EAX48961.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] Length = 307 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 24/174 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV G G I + + V+ + GR + +D+ P F Sbjct: 1 MKILVTGGAGFIGSHTVDKLIHEGCQVTVVDDLSTGRRENVNAQATFIEMDVCSPVLF-E 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + D +++ AA T+V + D+P+ +N G + + G+ + +++ Sbjct: 60 LFANVKFDGVVHLAAQTSVPVSMDKPDFDCRVNVLGTVNVLEVCRRFGVRRVVLASSAAV 119 Query: 105 --DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 DG++ P+ E + P ++YG SKL E ++ YT + V+LR A VY Sbjct: 120 YGDGVA-VPVREDAKMAPASVYGLSKLTAETYLSMYTRLFGLEGVVLRYANVYG 172 >gi|222054555|ref|YP_002536917.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221563844|gb|ACM19816.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 294 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 15/201 (7%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 VG D D P PDV+IN + +P A +IN+ +A+A Sbjct: 52 VGNLDAD--NPDSVLKTLAQVKPDVVINCIGIIKQLPSAKDPITAITINSLFPHRLAQAC 109 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 + G I+ISTD VF G S+ E + ++YG++K GE + V LRT+ Sbjct: 110 KAAGSRLIHISTDCVFSG-SKGNYTESDVADATDLYGRTKFLGEVDYP----HCVTLRTS 164 Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + L LA+E E++ + T +++AR IA +I N L Sbjct: 165 IIGHELKGCYSLIDWFLAQE-GEVNGYTEAIYTGFPTVEMARI---IADYVIPNP--QLN 218 Query: 209 GIFHMTADGGPVSWADFAEYI 229 G++ ++++ P+S + + + Sbjct: 219 GLYQVSSE--PISKYELLQLV 237 >gi|324993069|gb|EGC24989.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK405] gi|324995625|gb|EGC27537.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK678] gi|327461333|gb|EGF07664.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1] gi|327473972|gb|EGF19385.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK408] gi|327489193|gb|EGF20986.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1058] Length = 333 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|194016409|ref|ZP_03055023.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] gi|194011882|gb|EDW21450.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] Length = 330 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + +++ AA + V ++ +P ++ N GA A+ + + + Sbjct: 51 DLRDHAFLRQVFKRHQIEAVMHFAADSLVGESVTDPLKYYNNNVGGATALLQVMNEFDVK 110 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 I + ST + R PIDE TNP N YG++KLA E+ + +Y YV+LR Sbjct: 111 HIVFSSTAAAYGEPMRVPIDETDETNPTNPYGETKLAIEKMLKWSEQAYGIEYVVLR 167 >gi|88855651|ref|ZP_01130314.1| putative UDP-galactose 4-epimerase [marine actinobacterium PHSC20C1] gi|88814975|gb|EAR24834.1| putative UDP-galactose 4-epimerase [marine actinobacterium PHSC20C1] Length = 336 Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 17/181 (9%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGR------PDIDLLKPKDFASFFLSFSP-- 51 MK LV+G +G I L ++ Q E R PD + A + S Sbjct: 1 MKILVVGGSGFIGTRLLETLHEQGHEFTNFDRHISARFPDRSIAGDVRSAEELTAASAGH 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D IIN AA + +D ++ +N GA A+ AA++ GI I ++ GL + Sbjct: 61 DAIINLAA----EHRDDVSPLSLYTEVNVGGAHALVSAAEANGIQRIVFTSTVALYGLDK 116 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--IFGSNFLLSMLRLAK 167 E S P N YG+SKLA E +++ N A V +FG ++ LAK Sbjct: 117 NNAGEDSIPEPFNEYGRSKLAAEGVFSAWANADAARSLAIVRPSVVFGEGNRGNVYNLAK 176 Query: 168 E 168 + Sbjct: 177 Q 177 >gi|78188649|ref|YP_378987.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3] gi|78170848|gb|ABB27944.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3] Length = 327 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 13/161 (8%) Query: 30 GRPDIDLLKPKD-FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 G+ I++ +D FA +L D + N A T+ + +P+ INA +I +A Sbjct: 54 GKLTINVCDVRDPFAMDYLLQGQDYLFNLAGQTSHMDSMSDPKTDLDINATAQLSILEAC 113 Query: 89 DSIG--IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 I ++ ST ++ P+DE P P+++ G +KLAGE Y N Y I Sbjct: 114 HKTNSDIKIVFASTRQLYGKPDYLPVDEKHPIRPVDVNGINKLAGEWYHLLYNNVYGIRA 173 Query: 147 TAW-VYSIFG---------SNFLLSMLRLAKERREISVVCD 177 A + + +G FL +RL E + I V D Sbjct: 174 CALRLTNTYGPGMRVKDARQTFLGIWVRLLIEGKPIKVFGD 214 >gi|323474309|gb|ADX84915.1| dTDP-D-glucose 4,6-dehydratase [Sulfolobus islandicus REY15A] Length = 313 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV++N AA T VD++ +P+ + N G + +A+ G ++ISTD V+ Sbjct: 67 DVVVNFAAETHVDRSIYKPQDFVTTNVLGVINVLEASRLFGFKYVHISTDEVY---GEEC 123 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y +K + + V +Y Y Sbjct: 124 ADENSPLNPSSPYSAAKASADLFVKAYVRTY 154 >gi|319788851|ref|YP_004090166.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] gi|315450718|gb|ADU24280.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] Length = 339 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 11/117 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+++N AA + VD++ + PEI N G + A GI Sbjct: 58 IDICDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 + +STD V+ L P+D F+ T P++ Y SK + V +Y Y Sbjct: 118 QRYHQVSTDEVYGDL---PLDRPDLFFTETTPIHTSSPYSSSKAGADLLVMAYHRTY 171 >gi|118471043|ref|YP_890363.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium smegmatis str. MC2 155] gi|118172330|gb|ABK73226.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium smegmatis str. MC2 155] Length = 315 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D F P+VI + AA +V ++ D+P ++N G +A+AA G+ ++ S Sbjct: 63 DLTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRKVVHTS 122 Query: 100 T-DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + V+ P E P NP + Y K+AGE + Y N Y Sbjct: 123 SGGSVYGTPPAYPTSEDMPVNPASPYAAGKVAGEVYLNMYRNLY 166 >gi|333024546|ref|ZP_08452610.1| putative polysaccharide biosynthesis protein [Streptomyces sp. Tu6071] gi|332744398|gb|EGJ74839.1| putative polysaccharide biosynthesis protein [Streptomyces sp. Tu6071] Length = 321 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 24/163 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV----EIIRVGRPD---------IDLLKPKDFASFFL 47 M+ LV+G +G + L V + R GRP +DL Sbjct: 34 MRILVVGGSGFVGSVLVRHAVAEGYETHATYRSGRPPAAPGVVAHALDLRDGAAIGRLID 93 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + +P V++N T+ A+ +S+ AEGAG +A+A G +++S+D VF G Sbjct: 94 ATAPHVVVN----TSSGGAD------WSVTAEGAGRLAQAVARHGARLVHVSSDAVFSG- 142 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + +E +P+ YG +K A E V V+ RT+ V Sbjct: 143 ALPAYEECHAPDPVTPYGAAKAAAETAVRLVAPRAVVARTSLV 185 >gi|258646550|ref|ZP_05734019.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403964|gb|EEW97511.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 324 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +I+ AA+ +V + P + N + A + G+ I + S+ F T Sbjct: 67 DAVIHFAAFASVPDSVARPSRYYHNNVSNMLNLLDAMVATGVKYIVFSSSAATFGEPVYT 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PIDE P P+N YG +KL GE+ + Y Y I A+ Y Sbjct: 127 PIDEKHPQKPINPYGMTKLIGEKMLLDYEQAYGIHSCAFRY 167 >gi|217967734|ref|YP_002353240.1| UDP-glucose 4-epimerase [Dictyoglomus turgidum DSM 6724] gi|217336833|gb|ACK42626.1| UDP-glucose 4-epimerase [Dictyoglomus turgidum DSM 6724] Length = 329 Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL K F + D +++ AA + V ++ EP + N G + + I Sbjct: 50 VDLKKMDSLREVFEKYDIDAVMHFAALSTVAESMKEPFKYYENNILGGLNLLELMREYNI 109 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ ST V+ PI E P NP N+YG SKL EE ++ Y Y Sbjct: 110 KYFIFSSTAAVYGEPQVVPIPEDHPKNPTNVYGSSKLMFEEILSWYDEIY 159 >gi|307149756|ref|YP_003890799.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306986556|gb|ADN18434.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 328 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + D +++ AA +V ++ +P ++ N + + GI ++ ST V+ Sbjct: 63 FSEYKFDAVLHFAASISVSESILKPLSYYNNNTCNTLQLLQCCQLFGINQFVFSSTAAVY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLL 160 PI E SPT P+N YG+SKL E + Y YVILR +++ G+ Sbjct: 123 GEPKENPITELSPTEPINPYGRSKLMSEYFIDDYARTSQFRYVILR---YFNVAGAELKA 179 Query: 161 SMLRLAKERREISVVC 176 ++ +++ +S VC Sbjct: 180 NIGPSSQKAEHLSKVC 195 >gi|212550138|gb|ACJ26790.1| dTDP-4-dehydrorhamnose reductase (L-QuiNAc synthase) [Salmonella enterica subsp. salamae] Length = 289 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 35/248 (14%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGR-----------------PDIDLLKPKDF 42 K L++G NG + SL + E++ R ++D K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGGYEVLGTTRNIVVAEQLEQKLNVKIIDNVDATDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S P++++N A ++ IN+ +A+ + I+ STD Sbjct: 64 ESVVEEHKPNIVLNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHNAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G +++ ++ +++YGKSK GE Y + ++ LRT+ + GSN L Sbjct: 124 IFKGTKGNYVED-DESDAIDLYGKSKFLGE---VGY-DGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+++ F G PT + ++ H + +L G+FH++ D P+S Sbjct: 179 WFLSQKNSVTGFTNAIFSGLPTCYMA------EVIHKYV--LPNNLSGLFHLSVD--PIS 228 Query: 222 WADFAEYI 229 D I Sbjct: 229 KYDLLNII 236 >gi|315036036|gb|EFT47968.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0027] Length = 256 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|291532309|emb|CBL05422.1| dTDP-glucose 4,6-dehydratase [Megamonas hypermegale ART12/1] Length = 339 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 11/106 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S PDV++N AA + VD++ + PEI N G + A G I +STD V Sbjct: 69 LFSSEQPDVVVNFAAESHVDRSIENPEIFLQTNVMGTSVLMDACRKYGNIRYHQVSTDEV 128 Query: 104 FDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 + L P+D F+ T PL+ Y SK + + V +Y Y Sbjct: 129 YGDL---PLDRPDLFFTETTPLHTSSPYSASKASADLLVQAYYRTY 171 >gi|87123144|ref|ZP_01078995.1| UDP-glucose 4-epimerase [Synechococcus sp. RS9917] gi|86168864|gb|EAQ70120.1| UDP-glucose 4-epimerase [Synechococcus sp. RS9917] Length = 351 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 3/123 (2%) Query: 19 MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSIN 77 + +E++R D LL+ + F+ + SP + +I+ A AV ++ +P + +N Sbjct: 53 LVTDRLELVRGDLRDAALLE-RMFSGAAAAGSPIEAVIHFAGLKAVGESVAQPLRYWDVN 111 Query: 78 AEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ A+ A D+ G ++ ST V+ P+ E +PTNP++ Y ++KLA E+ + Sbjct: 112 VGGSRALLSAMDAHGCRVLVFSSTSTVYGEPEVFPLTETTPTNPIHPYAQTKLAVEQMLH 171 Query: 137 SYT 139 + + Sbjct: 172 ALS 174 >gi|227518303|ref|ZP_03948352.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] gi|227074246|gb|EEI12209.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0104] Length = 238 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 59 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 119 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 166 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 167 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 216 >gi|315923821|ref|ZP_07920050.1| dTDP-glucose 4,6-dehydratase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622854|gb|EFV02806.1| dTDP-glucose 4,6-dehydratase [Pseudoramibacter alactolyticus ATCC 23263] Length = 343 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 8/136 (5%) Query: 13 AQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 A +LS++ V D R R DI + A+ F PD++IN AA + VD++ ++PE Sbjct: 39 AGNLSTLASVMDNPRFRFVRGDI--CDRQAVAALFEEEHPDIVINFAAESHVDRSIEDPE 96 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGK 126 I N G + A + GI + +STD V+ L D F +P + + Y Sbjct: 97 IFLRTNIIGTSVLMDACRAHGIGRYHQVSTDEVYGDLPLDRPDLFFTEDTPIHTSSPYSA 156 Query: 127 SKLAGEEKVASYTNNY 142 SK + + V +Y Y Sbjct: 157 SKASADLLVLAYHRTY 172 >gi|118443902|ref|YP_877965.1| NAD-dependent epimerase/dehydratase family protein [Clostridium novyi NT] gi|118134358|gb|ABK61402.1| NAD-dependent epimerase/dehydratase family protein [Clostridium novyi NT] Length = 335 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D IDEF P P++ YG +K+A E V SY N Y V++R Sbjct: 135 PCKVVFMSTCMVYDKAKGKGIDEFHPVKPVSPYGGAKIAAENMVLSYYNAYKLPTVVIRP 194 Query: 148 AWVYSIF 154 Y F Sbjct: 195 FNTYGPF 201 >gi|302519777|ref|ZP_07272119.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB78] gi|302428672|gb|EFL00488.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB78] Length = 323 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ L D +++ AA + V ++ ++PE + N G A+ A GI ++ ST Sbjct: 57 AAALLPDGLDGVLHFAASSQVGESVEKPEKYWGNNVGGTRALLDAMREKGIGRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIF 154 + TPI E PT P + YG +KLA + +A + V LR A Y F Sbjct: 117 ATYGEPVNTPIVETDPTIPTSPYGNTKLAVDHMIADECRAHGLAAVSLRYFNVAGAYGDF 176 Query: 155 G------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 G S+ + +L++A+ RR +SV + + TP Sbjct: 177 GERHDPESHLIPIVLQVAQGRRAAVSVFGEDYATP 211 >gi|225872487|ref|YP_002753942.1| NAD dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] gi|225791799|gb|ACO31889.1| NAD dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] Length = 325 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ A+ + KA EP I F + +A G+ +Y S V+ Sbjct: 77 DVVVHLASNPDIAKAATEPSIDFYQGTMLTHQVLEAMRQAGVTRLLYASGSGVYGERGEE 136 Query: 111 PIDEFS-PTNPLNIYGKSKLAGEEKVASY 138 +DE++ P P++ YG SKLAGE +ASY Sbjct: 137 ALDEYAGPFLPISTYGASKLAGEALIASY 165 >gi|149916009|ref|ZP_01904532.1| UDP-glucose 4-epimerase [Roseobacter sp. AzwK-3b] gi|149810083|gb|EDM69931.1| UDP-glucose 4-epimerase [Roseobacter sp. AzwK-3b] Length = 338 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 S+ P+ +I+ A +V ++ +P + + +N G ++ +A I ++ S+ V+ Sbjct: 67 SWVPEAVIHFAGLKSVAESVADPALYYDVNVGGTVSLLRAMAEIDCSKIVFSSSATVYGT 126 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P DE PTNP+N YG++KL E+ + + Sbjct: 127 PEYLPYDEAHPTNPVNPYGRTKLVVEQLLGDW 158 >gi|33864736|ref|NP_896295.1| putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] gi|33632259|emb|CAE06715.1| Putative nucleotide sugar epimerase [Synechococcus sp. WH 8102] Length = 340 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIST 100 + F PDV++N AA V + + P N G G I + + +Y S+ Sbjct: 73 LTALFAEERPDVVVNLAAQAGVRYSLENPAAYIQSNLVGFGHILEGCRHHDVGHLVYASS 132 Query: 101 DYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 V+ G P E P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 133 SSVYGGNRNLPFHERQPVNHPVSLYAASKKANELMAHTYSHLYGVPATGLRFFTVYGPWG 192 Query: 156 SNFLLSML 163 + ML Sbjct: 193 RPDMAPML 200 >gi|116626317|ref|YP_828473.1| UDP-galactose 4-epimerase [Candidatus Solibacter usitatus Ellin6076] gi|116229479|gb|ABJ88188.1| UDP-galactose 4-epimerase [Candidatus Solibacter usitatus Ellin6076] Length = 307 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 3/127 (2%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 G++ + +LS +V R+ +IDL + A+ + +I+ AA+ AV ++ Sbjct: 8 GHDVTVVDNLSKGYRHNVPAERLH--EIDLADTQAIAALLREKKCEAVIHFAAFIAVGES 65 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 EP F+ N G+ ++ A G+ ++ ST V+ + ++PI E P +N YG Sbjct: 66 MREPAKYFTNNVCGSLSLLDAMTQAGVKHLVFSSTAAVYGDVKKSPITEDFPIQAVNPYG 125 Query: 126 KSKLAGE 132 +SK+ E Sbjct: 126 ESKVMVE 132 >gi|119944553|ref|YP_942233.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] gi|119863157|gb|ABM02634.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] Length = 295 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+IN + A +IN+ +A DS I+ STD +FDG Sbjct: 70 PDVVINCIGLIKQHSISKQHVDAVAINSLLPHQLASLCDSHSCKLIHFSTDCIFDGKKGF 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 +E +P + L++YG+SK GE ++ ++ LRT+ + S L L++E Sbjct: 130 YTEEDTP-DALDLYGRSKCLGEVD----SSPHLTLRTSIIGHELDSAVSLVDWFLSQENS 184 Query: 171 EISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 F G PT IAR +I+ ++ SD L G++ ++ D Sbjct: 185 TKGFSKAIFSGLPTCV--IARLLIE---KILPASD--LSGLYQLSVD 224 >gi|15606538|ref|NP_213918.1| nucleotide sugar epimerase [Aquifex aeolicus VF5] gi|2983750|gb|AAC07310.1| nucleotide sugar epimerase [Aquifex aeolicus VF5] Length = 321 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 79/204 (38%), Gaps = 26/204 (12%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F D +IN AA V + P I F+ N G + + G+ I ST + Sbjct: 71 LFQEFEFDAVINEAARAGVRYSIQNPHIYFTTNTLGNLNLLELMKEFGVKKLILASTSSL 130 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGS 156 + G P E P N P++ Y SK A E V +YT +Y VILR VY + G Sbjct: 131 YAG-QPMPFKEELPVNTPISPYAASKKAAE--VTAYTYHYLYGIDVVILRYFTVYGLAGR 187 Query: 157 ------NFLLSMLRL--------AKERREISVVCDQFGTPTSALQI-ARAIIQIAHNLIE 201 NF+ L+ ++R+ + V D AL + II + +N Sbjct: 188 PDMAVFNFIYKTLKGIPIKVYGDGSQKRDFTYVDDVAEATVKALNLKGYEIINVGNNKPR 247 Query: 202 NSDTSLRGIFHMTADGGPVSWADF 225 + I T V + DF Sbjct: 248 ALKELIELIEKYTGKEVKVEYGDF 271 >gi|329766677|ref|ZP_08258220.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136932|gb|EGG41225.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 334 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 2/98 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 LS DVIIN AA T VD++ P+ N G ++ +A+ + ++ISTD ++ Sbjct: 69 LSKDVDVIINFAAETHVDRSISNPKPFIDTNILGTYSLLEASKNNEKLFVHISTDEIYGD 128 Query: 107 LS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L + P EF P N Y +K + + V +Y Y Sbjct: 129 LEIGQKPFTEFDNLKPSNPYSATKASADLLVQAYVRTY 166 >gi|319948424|ref|ZP_08022562.1| UDP-glucose 4-epimerase [Dietzia cinnamea P4] gi|319437906|gb|EFV92888.1| UDP-glucose 4-epimerase [Dietzia cinnamea P4] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 28/210 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRPDIDLLKPKDFASF---FL 47 MK LV G G + +++ ++ +V I+ R G P+ D A+ L Sbjct: 1 MKLLVTGGAGYVGGVCATVLIERGHEVVILDDLSTGNRDGVPEGATFLEGDVAARAGEVL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 S D +++ AA + V ++ ++PE + N + A+ A + G+ ++ ST + Sbjct: 61 DPSFDGVLHFAARSLVGESVEKPEEYWQGNVVTSLALLDAMRAAGVGNLVFSSTAATYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFL 159 + PI E PT P N YG +KLA + + SY + + T A Y G N + Sbjct: 121 PEQVPITEDMPTRPTNTYGATKLAIDHAITSYAVAHGLAATSLRYFNVAGAYHGAGENRV 180 Query: 160 LS------MLRLA-KERREISVVCDQFGTP 182 + +L++A R I V D + TP Sbjct: 181 VETHLIPLVLQVALGHRDHIKVFGDDWPTP 210 >gi|309389681|gb|ADO77561.1| dTDP-glucose 4,6-dehydratase [Halanaerobium praevalens DSM 2228] Length = 319 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL-SR 109 D+++N AA + VD++ +P + N G + A + I ISTD V+ L S+ Sbjct: 74 DLVVNFAAESHVDRSIADPAVFIQNNVLGTQNLLDLALEFEVKKFIQISTDEVYGSLKSQ 133 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E SP NP N Y SK A + V SY Y Sbjct: 134 NKFTELSPLNPSNPYAASKAAADLLVKSYFKTY 166 >gi|256616718|ref|ZP_05473564.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256596245|gb|EEU15421.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] Length = 330 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|313124421|ref|YP_004034680.1| udp-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280984|gb|ADQ61703.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 329 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 17/150 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV+G G I V D ++ + G + +DLL A Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDQKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEE 133 G+ + PI E +P NP+N YG++K+ E+ Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEK 150 >gi|255533524|ref|YP_003093896.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366] gi|255346508|gb|ACU05834.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366] Length = 315 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 21/160 (13%) Query: 2 KCLVIGNNGQIAQSL-----SSMCVQDVEIIRVGRPDIDL-----------LKPKDFASF 45 K LV+G+NGQI L + +V + RPD D+ L+ + + Sbjct: 5 KILVLGSNGQIGTELVTALRKTYSEDNVIACDIRRPDYDIKNSGPFEFVNVLEKETLNTI 64 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F + P + AA + E P++A+ +N G I + A + +Y + Sbjct: 65 FQKYKPTQVYLLAALLSA-TGEQNPKLAWDLNMNGLLNILELAITYKTAKVYWPSSIAVF 123 Query: 106 GLSRTPIDE---FSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +P D+ F +P +YG SKLAGE Y Y Sbjct: 124 G-PNSPKDQTPQFCVMDPNTVYGISKLAGERWCEYYHQKY 162 >gi|307277322|ref|ZP_07558422.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2134] gi|306506000|gb|EFM75170.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2134] Length = 238 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 217 >gi|282848734|ref|ZP_06258129.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294792367|ref|ZP_06757514.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|282581520|gb|EFB86908.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294456266|gb|EFG24629.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 306 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 19/173 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD----------IDLLKPKDFAS 44 M+ V G G I L ++D ++V G + +D+ PK + S Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGHTVQVIDNLYTGNKEFVHSKAQFVELDIRDPKLY-S 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYV 103 F PD I + AA T V + +P + IN G + AA + + + S+ V Sbjct: 60 VLEEFRPDYIFHEAAQTEVSTSMSDPMLDCDINLMGLINLLNAAVKLDVKKFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 + L P++E NP + YG +KL E + Y + + + YS +FG Sbjct: 120 YGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYICYRYSNVFG 172 >gi|226323948|ref|ZP_03799466.1| hypothetical protein COPCOM_01725 [Coprococcus comes ATCC 27758] gi|225207497|gb|EEG89851.1| hypothetical protein COPCOM_01725 [Coprococcus comes ATCC 27758] Length = 332 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYV 103 F PD+++N AA + VD++ + PE+ N +G + A GI + +STD V Sbjct: 69 LFEEEHPDIVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIWRYHQVSTDEV 128 Query: 104 FDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + L D F +P + + Y SK A + V SY Y Sbjct: 129 YGDLPLERPDLFFTEETPIHTSSPYSASKAAADLLVQSYHRTY 171 >gi|160879360|ref|YP_001558328.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] gi|160428026|gb|ABX41589.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] Length = 337 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 10/203 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F+ P +++N AA V + ++PE + N G I +A G+ Sbjct: 72 DLADKQAIDKLFIECKPQIVVNLAAQAGVRYSIEKPETYINSNIIGFFNILEACRHYGVE 131 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTA 148 I+ S+ V+ + P + T+ P+++Y +K + E Y++ Y I LR Sbjct: 132 HLIFASSSSVYGANQKVPFSTYDKTDTPVSLYAATKKSNELMAYPYSHLYGIPTTGLRFF 191 Query: 149 WVYSIFGSNFL--LSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHNLIENSD 204 VY +G + S + E + I + D + T I + I QI N E + Sbjct: 192 TVYGPYGRPDMAYFSFTKSIMESKPIKIFNNGDMYRDFTYIDDIVKGIEQILCNPPEQDE 251 Query: 205 TSLRGIFHMTADGGPVSWADFAE 227 ++ + + PV D E Sbjct: 252 NKIKYKIYNIGNNKPVKLMDCIE 274 >gi|46202280|ref|ZP_00053481.2| COG1087: UDP-glucose 4-epimerase [Magnetospirillum magnetotacticum MS-1] Length = 326 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 5/119 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL + F +I+ A + VD++ +P + N ++ +A +G Sbjct: 51 EVDLLDTEVLVELFRRHDVSAVIHFAGFAYVDESMADPTAYYRTNVVAGLSLLEAMVRVG 110 Query: 93 IPCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I + ST + S PI E P P+N YG++KL E + Y +VILR Sbjct: 111 CRAIVFSSTCATYGTPSSVPIAESEPQIPINPYGETKLVFERALEWYERCHGIRHVILR 169 >gi|256752410|ref|ZP_05493269.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] gi|256748679|gb|EEU61724.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] Length = 316 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 20/173 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK L+ G G I +++ + +++ V+ + G+ + + D Sbjct: 1 MKVLITGGAGFIGSNIADLLIENGYEVVIVDNLSTGKHEFINKKAVFYNKDITDNDLYEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F PD +I+ AA + K+ EP +N G + + + S + IY S+ V+ Sbjct: 61 FEKEKPDYVIHQAAQIDIQKSIKEPVFDAKVNILGTVNLLECSKSYKVKKIIYASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 IDE +P++ YG SK E Y Y ILR A VY I Sbjct: 121 GDPEYLAIDEKHKVDPISYYGISKHTPEHYFEVYRQLYGLKYTILRYANVYGI 173 >gi|114764086|ref|ZP_01443325.1| UDP-glucose 4-epimerase [Pelagibaca bermudensis HTCC2601] gi|114543444|gb|EAU46459.1| UDP-glucose 4-epimerase [Roseovarius sp. HTCC2601] Length = 327 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 + F + P +++ AA + V +A EP + N EG+ + +AA + G + ++ ST Sbjct: 60 AVFAQYQPVAVMHFAALSQVGEAMSEPGRYWRNNVEGSLTLIEAATAAGCLNFVFSSTCA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + +DE +P PLN YG SK A E+ + A+Y VI R Sbjct: 120 TYGEHDNVVLDEGTPQEPLNAYGASKRAVEDILRDFGAAYGLKSVIFR 167 >gi|294780100|ref|ZP_06745475.1| UDP-glucose 4-epimerase [Enterococcus faecalis PC1.1] gi|294452823|gb|EFG21250.1| UDP-glucose 4-epimerase [Enterococcus faecalis PC1.1] Length = 248 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 59 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 119 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 166 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 167 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 216 >gi|147920194|ref|YP_686040.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110621436|emb|CAJ36714.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 309 Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA V ++ ++P N G + AA + I +Y S+ V+ R Sbjct: 68 DAIVHCAAQIFVARSVEDPSFDADNNIFGTINLLDAARNANIRRFVYFSSAAVYGDPLRL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 P+DE P NP++ YG SKL+GE+ ++ Y + TA Sbjct: 128 PVDEEHPQNPMSPYGVSKLSGEKYALAFQKIYGVHTTA 165 >gi|188993277|ref|YP_001905287.1| hypothetical protein xccb100_3882 [Xanthomonas campestris pv. campestris str. B100] gi|167735037|emb|CAP53249.1| galE [Xanthomonas campestris pv. campestris] Length = 410 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 2/107 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ P + A + +I+ AA AV ++ EP F+ N G A+ +A + G+ Sbjct: 84 MDVRAP-ELAELMQRERIEAVIHFAALKAVGESVREPLRYFNNNVTGTLALLRAMRTAGV 142 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 ++ S+ V+ + +PI+E +P +N YG++KL EE + + Sbjct: 143 ANLVFSSSATVYGDENTSPIEERAPLKAINPYGRTKLMMEEMIGDLS 189 >gi|104774538|ref|YP_619518.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514658|ref|YP_813564.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423619|emb|CAI98565.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093973|gb|ABJ59126.1| UDP-galactose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126370|gb|ADY85700.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 329 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 17/150 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV+G G I V D ++ + G + +DLL A Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDPKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEE 133 G+ + PI E +P NP+N YG++K+ E+ Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEK 150 >gi|332360899|gb|EGJ38704.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK355] Length = 333 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRSVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|152983180|ref|YP_001353965.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] gi|151283257|gb|ABR91667.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] Length = 313 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 15/209 (7%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 V DLL ++ F DVI++ AA ++ + ++ ++A + + A A Sbjct: 46 VSHAHTDLLDSEEVGKL-RDFRADVIVHLAA--SIPSSFEDEQVAMTNQSIDANIFNLAK 102 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +S G I+ S+ V++ + P E P +IY +SKL E+ ++ + + +R A Sbjct: 103 ES-GASVIFCSSVSVYEN-RQGPWSESMTLAPCSIYARSKLDSEKLFSTLESGALSIRIA 160 Query: 149 WVYSI---FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS 203 Y + L LR A R +++ + T A IA AI++I N Sbjct: 161 SPYGVVEPIRKGVLFHFLREAVAGRALTLHGEGLRTQDFIHARDIANAILKIVR--FWNK 218 Query: 204 DTSL--RGIFHMTADGGPVSWADFAEYIF 230 DT L RG+ ++ A G PVS + A+ + Sbjct: 219 DTGLAKRGVLNI-ASGAPVSMIELAQLVL 246 >gi|221640108|ref|YP_002526370.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] gi|221160889|gb|ACM01869.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] Length = 328 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + ++ P +++ AA + V ++ +P + +N GA + +A + G+ Sbjct: 52 DLMDRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEATVAAGVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE +P P+N YG SK A EE VA++ + + T + Y Sbjct: 112 NFVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHTIFRY 169 >gi|124024227|ref|YP_001018534.1| nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9303] gi|123964513|gb|ABM79269.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9303] Length = 340 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + P V++N AA V + + P N G G I + G+ +Y S+ V Sbjct: 76 LFKAEKPQVVVNLAAQAGVRYSLENPAAYIQANLVGFGHILEGCRHHGVQHLVYASSSSV 135 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNF 158 + G P E P N P+++Y +K A E +Y++ Y + LR VY +G Sbjct: 136 YGGNRNLPFHEQQPVNHPVSLYAATKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRPD 195 Query: 159 LLSML 163 + ML Sbjct: 196 MAPML 200 >gi|39937051|ref|NP_949327.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris CGA009] gi|39650908|emb|CAE29431.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris CGA009] Length = 337 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 29/194 (14%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 S D II+ A V + +P + N + ++ AA G+ I+ ST V+ Sbjct: 64 SHRVDAIIHFAGSVIVSASMRDPLGYYRNNTSTSRSLLSAATRRGVKNFIFSSTAAVYGN 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFL--- 159 R P+ E +PT PL+ YG+SKL E + +Y NYV LR +++ G++ L Sbjct: 124 PDRIPVGEDAPTRPLSPYGRSKLMTEIMLHDAAEAYGVNYVALR---YFNVAGADPLGRV 180 Query: 160 -------LSMLRLAKE-----RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 ++++A E R I V + PT+ R I + +L E +L Sbjct: 181 GLATEGATHLIKIAVEAATGQRSRIDVYGTDY--PTTDGSCIRDFIHVT-DLAEAHGAAL 237 Query: 208 RGIFHMTADGGPVS 221 ++ A GGPV+ Sbjct: 238 G---YLRAGGGPVT 248 >gi|254825401|ref|ZP_05230402.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-194] gi|293594644|gb|EFG02405.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-194] Length = 327 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSS 117 Query: 102 YVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G S R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 118 AATYGESERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|322385464|ref|ZP_08059108.1| UDP-glucose 4-epimerase [Streptococcus cristatus ATCC 51100] gi|321270202|gb|EFX53118.1| UDP-glucose 4-epimerase [Streptococcus cristatus ATCC 51100] Length = 333 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LTDKDFMRDVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMISLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|257887057|ref|ZP_05666710.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257895622|ref|ZP_05675275.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|293377767|ref|ZP_06623956.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] gi|257823111|gb|EEV50043.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257832187|gb|EEV58608.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|292643767|gb|EFF61888.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] Length = 329 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTP 215 >gi|29375648|ref|NP_814802.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257418903|ref|ZP_05595897.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|29343109|gb|AAO80872.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257160731|gb|EEU90691.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 329 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|324989634|gb|EGC21578.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK353] Length = 286 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I QS V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGQSFKK-YVSSREDVQVDELDVREETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESEYNQVNTQLPYELAQKAKGEGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + ILR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAILRPPMVY 153 >gi|220913879|ref|YP_002489188.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus A6] gi|219860757|gb|ACL41099.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus A6] Length = 321 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 25/160 (15%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDI--------------DLLKPKDFASFF 46 + V G +G++ +S+ + + ++I V R + DLL P + Sbjct: 3 RIFVTGGSGRLGRSVVAGLAEAGHQVISVDRDALPAELLPAGVEQATADLLAPGEALRLL 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PD +I+ AA A ++ + F+ N A A+ AA +G+P I ++ G Sbjct: 63 RDARPDAVIHLAAIAVPFSAPED--VIFATNTRLAFAVISAATELGVPKIITASSPTVLG 120 Query: 107 LSRT--------PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P+DE +P P N Y SKL E+ V + Sbjct: 121 YGSPAGWLPPSFPLDERTPAKPWNAYALSKLIAEQTVQMF 160 >gi|29377255|ref|NP_816409.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|29344721|gb|AAO82479.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] Length = 330 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|126463065|ref|YP_001044179.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] gi|126104729|gb|ABN77407.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] Length = 328 Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + ++ P +++ AA + V ++ +P + +N GA + +A + G+ Sbjct: 52 DLMDRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEATVAAGVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE +P P+N YG SK A EE VA++ + + T + Y Sbjct: 112 NFVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHTIFRY 169 >gi|221201103|ref|ZP_03574143.1| putative epimerase/dehydratase WbiG [Burkholderia multivorans CGD2M] gi|221206445|ref|ZP_03579458.1| putative epimerase/dehydratase WbiG [Burkholderia multivorans CGD2] gi|221173754|gb|EEE06188.1| putative epimerase/dehydratase WbiG [Burkholderia multivorans CGD2] gi|221178953|gb|EEE11360.1| putative epimerase/dehydratase WbiG [Burkholderia multivorans CGD2M] Length = 321 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%) Query: 48 SFSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIP-CIYIST-DYV 103 + + D +++ AA V + E +P+ AF + N G +AKAA G+ +Y S+ + Sbjct: 62 TLAADCVVHLAARVHVMRDESPDPDAAFEATNVAGTLRLAKAARQHGVRRIVYASSIKAM 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI-FGSNF 158 +G TP+ E + P + YG+SKL E ++A + + VI+R VY +NF Sbjct: 122 GEGDGGTPLSEAANPEPQDAYGRSKLRAERQLAQFGAANALDVVIVRPPLVYGPGVRANF 181 Query: 159 LLSMLRLAK 167 L M +A+ Sbjct: 182 LRMMDAVAR 190 >gi|26006984|sp|P96995|GALE_STRMU RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase Length = 333 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F S +PDV +I+ AAY+ V ++ +P F N G + + G+ Sbjct: 53 LADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 YIVFSSTAATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDRAYGIKFVPLR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHSPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|307592115|ref|YP_003899706.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306985760|gb|ADN17640.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 714 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F +S D +++ AAY V ++ +P + N G + +A + + I S+ Sbjct: 72 FSRYSIDAVMHFAAYAYVGESMMDPAKYYRNNVVGTLTLLEAMVAANVKRIVFSSTCATY 131 Query: 106 GLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + P+ E P NP+N YG+SKL E+ +A + Y Sbjct: 132 GVPESIPVTEDQPQNPINPYGRSKLMAEKILADFDRAY 169 >gi|293570640|ref|ZP_06681691.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] gi|291609311|gb|EFF38582.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] Length = 329 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTP 215 >gi|209696435|ref|YP_002264366.1| uridine diphosphate N-acetylgalactosamine 4-epimerase [Aliivibrio salmonicida LFI1238] gi|208010389|emb|CAQ80733.1| uridine diphosphate N-acetylgalactosamine 4-epimerase [Aliivibrio salmonicida LFI1238] Length = 335 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P+ A+ F D +I+ A AV ++ ++P + + N G + +A G+ Sbjct: 58 DIRDPQILATVFAENQIDSVIHFAGLKAVGESVEKPIMYYDNNVSGTLVLVEAMRKAGVN 117 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I + S+ V+ + TPI+E P + N YG+SKL EE Sbjct: 118 SIVFSSSATVYGDPASTPINENFPKSATNPYGRSKLIVEE 157 >gi|332559112|ref|ZP_08413434.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] gi|332276824|gb|EGJ22139.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] Length = 328 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + ++ P +++ AA + V ++ +P + +N GA + +A + G+ Sbjct: 52 DLMDRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEATVAAGVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE +P P+N YG SK A EE VA++ + + T + Y Sbjct: 112 NFVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHTIFRY 169 >gi|319789559|ref|YP_004151192.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] gi|317114061|gb|ADU96551.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] Length = 331 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLS 108 PDV+++ AA + VD++ EP + + N G + AA G+ + ISTD V+ ++ Sbjct: 70 KPDVVVHFAAESHVDRSIVEPTVFVTTNVLGTQNLLDAAVEAGVEKFVNISTDEVYGEIA 129 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE 132 + E SP NP + Y SK A + Sbjct: 130 QGRFTEESPLNPSSPYSASKAAAD 153 >gi|307278669|ref|ZP_07559738.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] gi|306504653|gb|EFM73854.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] Length = 320 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|149050198|gb|EDM02522.1| TDP-glucose 4,6-dehydratase (predicted), isoform CRA_b [Rattus norvegicus] Length = 239 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + A + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|77464223|ref|YP_353727.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] gi|77388641|gb|ABA79826.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] Length = 328 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + ++ P +++ AA + V ++ +P + +N GA + +A + G+ Sbjct: 52 DLMDRASIDAALETWKPVAVMHFAALSLVGESMRDPGTYWRVNVTGALNLLEATVAAGVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE +P P+N YG SK A EE VA++ + + T + Y Sbjct: 112 NFVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMVANFGAAFGLNHTIFRY 169 >gi|56420684|ref|YP_148002.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] gi|56380526|dbj|BAD76434.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] Length = 328 Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 17/163 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ +DF F + +I+ AA + V ++ +EP + N G + + G+ Sbjct: 51 IRDRDFLREVFRQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQ 110 Query: 96 I-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWV 150 I + ST V+ + PI E PT P N YG++KLA E+ + +Y + LR V Sbjct: 111 IVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNV 170 Query: 151 YSIFG----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 +G ++ + +L++ +R EI + D + TP Sbjct: 171 AGAYGTTIGEDHNPETHLIPLILKVPLGQREEIYIFGDDYDTP 213 >gi|239813765|ref|YP_002942675.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus S110] gi|239800342|gb|ACS17409.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus S110] Length = 295 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 34/184 (18%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + L +P+ +++ AA + V A D +++N G + A + +P Sbjct: 33 DLTHDEAIRKEVLEIAPEAVVHLAAISFVGHANDA--AFYAVNVVGTTNLLNAL--VQLP 88 Query: 95 -----CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--------- 140 + S+ ++ +R+PIDE P+N YG SKLA E +Y + Sbjct: 89 ERPDRVLLASSANIYGNTARSPIDETQAPAPVNHYGMSKLAMEYMARTYRDRLNLVITRP 148 Query: 141 ----------NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF------GTPTS 184 N++I + A ++ + L L + +E ++ +VCD + G P Sbjct: 149 FNYTGPGQDANFLIPKLAMHFAARAPSIALGNLDVEREFNDVQMVCDAYLLLLAHGEPGE 208 Query: 185 ALQI 188 A I Sbjct: 209 AYNI 212 >gi|149195577|ref|ZP_01872634.1| hypothetical protein LNTAR_16833 [Lentisphaera araneosa HTCC2155] gi|149141039|gb|EDM29435.1| hypothetical protein LNTAR_16833 [Lentisphaera araneosa HTCC2155] Length = 298 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 29/175 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDI-------------DLLKPKDFASFF 46 K ++IG +G + + + + Q+ E+I V R D+L + Sbjct: 3 KVMIIGGSGCVGEETAKALLKSQNCEVIAVSRGKAAHDAIEGVIYEQGDILDKESILRLL 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYISTDYVF 104 ++ +++ AA + + PE A +N G + +A ++IST V+ Sbjct: 63 QKYAVTHLLHTAALR-TSQCKANPEQAVQVNIIGTANVLEAIREYAKLEHVVFISTAAVY 121 Query: 105 ----DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DG T DE SP LN+Y +KLAGE V SY ++Y +LR +Y Sbjct: 122 KVPKDG---TRPDENSPVEALNLYTSTKLAGEALVESYAHSYGLQCSVLRPQIIY 173 >gi|154687523|ref|YP_001422684.1| hypothetical protein RBAM_031220 [Bacillus amyloliquefaciens FZB42] gi|154353374|gb|ABS75453.1| hypothetical protein RBAM_031220 [Bacillus amyloliquefaciens FZB42] Length = 309 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +++ AA VD E +N EG + + +GI + + S+ VF Sbjct: 61 DAVVHLAAMVGVDSCRSNEEDVIRVNFEGTKNVTEVCGELGISTLLFSSSSEVFGDSPDF 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 P E S P + YGK+KL EE + ++ + +R ++++G Sbjct: 121 PYTETSRKLPKSAYGKAKLQSEEYLREQASDELHIRVVRYFNVYG 165 >gi|119505441|ref|ZP_01627514.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2080] gi|119458719|gb|EAW39821.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2080] Length = 329 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E+I V D+ L+ S L D + + AA + V ++ +P + + N G + Sbjct: 47 EVIEVDIRDLAALR-----SALLHRHFDGVFHFAAKSLVGESGQKPLLYYQNNVSGTANL 101 Query: 85 AKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 + A G C++ ST V+ I E P NP+N+YG++KLA E+ +++ Sbjct: 102 LEVALESGWGHCVFSSTAAVYGSPQARVIAEEHPLNPVNVYGETKLAMEQMLSA 155 >gi|86356222|ref|YP_468114.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] gi|86280324|gb|ABC89387.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] Length = 344 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 80/202 (39%), Gaps = 20/202 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ A+ GI Sbjct: 51 DIADPDILKKIFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSASIRAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTA 148 S+ G +T P+ E +P NP N YG+SKL E + A+Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQQTDLPVKETAPLNPENPYGQSKLMTELMLRDAAAAYDFNYVALRYF 170 Query: 149 WV----------YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 V S G+ L+ + A + SV PT R I + Sbjct: 171 NVAGADPHQRTGQSTSGATHLVKVACEAALGKRDSVHVYGIDYPTHDGTGVRDYIHVT-- 228 Query: 199 LIENSDTSLRGIFHMTADGGPV 220 + +D L+ + H+ D GP+ Sbjct: 229 --DLADAHLKALQHLRRDKGPL 248 >gi|15789923|ref|NP_279747.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|169235644|ref|YP_001688844.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Halobacterium salinarum R1] gi|10580331|gb|AAG19227.1| UDP-glucose 4-epimerase [Halobacterium sp. NRC-1] gi|167726710|emb|CAP13496.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Halobacterium salinarum R1] Length = 314 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P D A ++ D++ + AAYT D ++P F N + + ++G+ Sbjct: 55 DMCDPDDVADV-ITPDVDIVFHFAAYT--DTNYEQPRQLFEENGAMTYNVLERMAAVGVD 111 Query: 95 CIYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ G + P E ++P P+++YG SKLA E +++Y + + I T+WVY Sbjct: 112 RFAFTSSSTVYGEAPMPTPEDYAPLEPISVYGASKLADEGLISTYAHAHGI--TSWVY 167 >gi|163846792|ref|YP_001634836.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222524610|ref|YP_002569081.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668081|gb|ABY34447.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222448489|gb|ACM52755.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 337 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--DSIGIPCIYI 98 +++ +L DV+ N A T+ + P I IN +I +A + GI +Y Sbjct: 70 EYSMNYLVQGQDVLFNLAGQTSHLDSMRNPYIDLDINCRAQLSILEACRKHNPGITVVYA 129 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ST ++ + P+DE +P+++ G +K+AGE Y N Y I Sbjct: 130 STRQIYGKPNYLPVDERHLLHPVDVNGINKMAGEWYHILYNNVYGI 175 >gi|238763334|ref|ZP_04624298.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC 33638] gi|238698433|gb|EEP91186.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC 33638] Length = 293 Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 27/174 (15%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+IN + + A IN+ +A D I+ STD VFDG +T Sbjct: 70 PDVVINCIGLIKQHEIAKQYVPAIKINSLLPHQLAALCDKYEAKYIHFSTDCVFDG--KT 127 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF--LLSMLR-LA 166 + +E N +IYGKSK GE ++ LRT SI G +S++ Sbjct: 128 GLYNELDLPNSTDIYGKSKYLGEVNYGR----HLTLRT----SIIGHELSSAVSLIDWFL 179 Query: 167 KERREISVVCDQF--GTPTS--ALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 K++ E++ G PTS A +A I+ D SL G++H++ D Sbjct: 180 KQQNEVNGFSKAIFSGLPTSYIAKLLAEKIL---------VDNSLTGLYHLSVD 224 >gi|315574085|gb|EFU86276.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0309B] gi|315581775|gb|EFU93966.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0309A] Length = 283 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 23 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 82 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 83 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 139 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 140 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 178 >gi|332361411|gb|EGJ39215.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1056] Length = 347 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMLDPLKYFDNNTAGMVSLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMIETIIRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|158325169|gb|ABW34723.1| UDP-galactose 4-epimerase [Lactococcus garvieae] Length = 329 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AY+ V ++ +P + F+ N GA I + + GI I + ST F +PI Sbjct: 71 LMHFCAYSLVGESMQKPLMYFNNNVGGAQVILETMEKFGIKHIVFSSTAATFGIPEESPI 130 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFG------------- 155 E +P P+N YG+SKL E+ + + YV LR +++ G Sbjct: 131 SEKTPQKPINPYGESKLIMEKMMKWQSEATDMTYVALR---YFNVAGAKHDGTIGEAHKN 187 Query: 156 -SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L+ A +RE I++ D + TP Sbjct: 188 ETHLIPLILQTALGQREFITIYGDDYNTP 216 >gi|117924362|ref|YP_864979.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] gi|117608118|gb|ABK43573.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] Length = 301 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D L+ P F + ++ A +++ ++P+ +++IN E + AIA Sbjct: 44 DPTLIDPDQFLDLYGHVEQIYLL--MAVSSLITCANDPQGSYAINVEASKAIALWCKKHQ 101 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVY 151 IP ++ S+D VF G ++ PT PL YGK K E + ++ + + +R + Y Sbjct: 102 IPLLFTSSDAVFGGQQGLYDEQHIPT-PLVTYGKQKREVEVFLQAHLPHLHTTVRLSKTY 160 Query: 152 SIFGSN--FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 S + L + +R ++++ I DQ P + + A++ + + RG Sbjct: 161 SSNPQDKTLLSAWVRAWQQQQPIMCATDQRFNP---IHVEDAVVGMQQLMAGQH----RG 213 Query: 210 IFHM 213 ++H+ Sbjct: 214 LYHL 217 >gi|295792733|gb|ADG29296.1| putative dTDP-glucose 4,6-dehydratase [Paenibacillus alvei] Length = 341 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ EP+I N G + A+ G+ + +STD V+ L T Sbjct: 75 DVVVNFAAESHVDRSILEPDIFIKTNVLGTQILLDASKKYGVTKFVQVSTDEVYGSLGET 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK G+ V +Y Y Sbjct: 135 GLFAETTPLAPNSPYSASKAGGDLLVRAYHETY 167 >gi|167412347|gb|ABZ79809.1| putative sugar epimerase [Campylobacter jejuni] Length = 212 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL S F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLTSVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|265764204|ref|ZP_06092772.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263256812|gb|EEZ28158.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 298 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 20/188 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-------FLSFSPDV 53 M L G +G + +L S+ +I VG L P+D + L+ DV Sbjct: 1 MNLLFTGASGFLGSNLYSLLKDKYQIRTVG------LTPRDNYTINLVSDVPKLNIKYDV 54 Query: 54 IINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRT 110 +++ A ++ K E+E ++ F +N +G + A ++ GIP I+IST V+ S Sbjct: 55 VLHAAGKAHSIPKTEEEKQLFFDVNLQGTKNLCTALENSGIPKAFIFISTVAVYGCDSGE 114 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 I E P N Y SK+ E+ + A + ILR + + L +M+R Sbjct: 115 NITEEHPLNGTTPYALSKIKAEKYLEGWCAMHNVKLSILRPSLIAGPKPPGNLGAMIRGI 174 Query: 167 KERREISV 174 + + +S+ Sbjct: 175 RNGKYLSI 182 >gi|171185252|ref|YP_001794171.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934464|gb|ACB39725.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] Length = 308 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 28/199 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD---------IDLLKPKDFASF 45 MK LV G G I L V++ V+ + GR + + LK D+A Sbjct: 1 MKVLVTGGAGFIGSHLVDRLVEEGYEVIVVDNLSTGRRENVNPQAWLHVADLKDPDWA-- 58 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 + S DV+ + AA V EP + F N + + A G+ ++ S+ V+ Sbjct: 59 -VGVSADVVFHFAANPEV---RAEPRVHFEENVVATFNVLEWARVSGVKTVVFASSSTVY 114 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLS-- 161 P E P P+++YG +K AGE A+Y Y + A Y+ + G Sbjct: 115 GDARVMPTPEDYPLEPVSVYGAAKAAGEVMCATYARLYGVRCLALRYANVVGPRLRHGAL 174 Query: 162 ---MLRLAKERREISVVCD 177 +++L K+ E+ V+ D Sbjct: 175 YDFLMKLRKKPEELEVLGD 193 >gi|125717843|ref|YP_001034976.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK36] gi|125497760|gb|ABN44426.1| UDP-glucose 4-epimerase, putative [Streptococcus sanguinis SK36] Length = 347 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADKAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|87119541|ref|ZP_01075438.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MED121] gi|86165017|gb|EAQ66285.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MED121] Length = 298 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 28/255 (10%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 DF S LS DV+++ + + EP+ A+ E A KA + +S Sbjct: 57 DFWSLELS-QFDVVLDALSL------DTEPKKAY---LEQILACNKALLGLDTNMFMLSD 106 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 VF GL T DE + G+ E V + N ++LR++W++ +F+ Sbjct: 107 VEVFSGLKGTAYDESELPDSETAKGRQLTQIESAVLNDEVN-IVLRSSWLFGGKDEDFVA 165 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGG 218 ++L K +I + D G PT + R +A +LI+ + G++H + Sbjct: 166 NILTSFKAGEQILLQDDVIGNPTPISDLVR----VAFSLIKQRYYGAKNAGVYHYSC-AE 220 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTK---QYPTKAHRPA---YSCLDCSKLANTH 272 +SW F E + + ++ ++F + +Y ++ A L C K+ N Sbjct: 221 EISWFGFGEAV----SVNATQFNSQLQVFLQPINEYQAESSDLASLRKHSLSCRKIFNHF 276 Query: 273 NIRISTWKEGVRNIL 287 ++ W+ +RN++ Sbjct: 277 GVKQRPWRASLRNLV 291 >gi|301163541|emb|CBW23092.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 638R] Length = 298 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 20/188 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-------FLSFSPDV 53 M L G +G + +L S+ +I VG L P+D + L+ DV Sbjct: 1 MNLLFTGASGFLGSNLYSLLKDKYQIRTVG------LTPRDNYTINLVSDVPKLNIKYDV 54 Query: 54 IINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRT 110 +++ A ++ K E+E ++ F +N +G + A ++ GIP I+IST V+ S Sbjct: 55 VLHAAGKAHSIPKTEEEKQLFFDVNLQGTKNLCTALENSGIPKAFIFISTVAVYGCDSGE 114 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 I E P N Y SK+ E+ + A + ILR + + L +M+R Sbjct: 115 NITEEHPLNGTTPYALSKIKAEKYLEGWCAMHNVKLSILRPSLIAGPNPPGNLGAMIRGI 174 Query: 167 KERREISV 174 + + +S+ Sbjct: 175 RNGKYLSI 182 >gi|294497874|ref|YP_003561574.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294347811|gb|ADE68140.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 316 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F F P +++ AA +V + ++N +G I A G I+ S+ V+ Sbjct: 63 FAEFKPHYVVHQAAQVSVAHSVTNFHHDANVNIQGTINIINACKKHGAEKIIFASSAAVY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVAS--YTNNYVILRTAWVY 151 + TPI PT+P + YG SK EE K+A Y +YVILR + VY Sbjct: 123 GNTNVTPITLTHPTSPASPYGLSKFTSEEYLKLAKQLYDIDYVILRYSNVY 173 >gi|90425911|ref|YP_534281.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisB18] gi|90107925|gb|ABD89962.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisB18] Length = 332 Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 14/83 (16%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR 109 PD +++P AY ++ N A A+ A G+P I + ST V+ R Sbjct: 84 PDSVLHPLAY-------------YANNTVNARALIACAVEHGVPHIVFSSTAAVYGEPDR 130 Query: 110 TPIDEFSPTNPLNIYGKSKLAGE 132 PIDE PT P+N YG+SKL E Sbjct: 131 VPIDEQQPTAPINPYGRSKLMVE 153 >gi|84500647|ref|ZP_00998896.1| UDP-glucose 4-epimerase [Oceanicola batsensis HTCC2597] gi|84391600|gb|EAQ03932.1| UDP-glucose 4-epimerase [Oceanicola batsensis HTCC2597] Length = 327 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 DLL K F S +P +++ AA + V ++ +P + + N EG+ + +AA D+ + Sbjct: 51 DLLDRKRLDEVFASHAPVAVMHFAALSQVGESMKKPGLYWQNNVEGSRNLIEAACDAGCM 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE S P+N YG SK A E+ + A++ +VI R Sbjct: 111 NFVFSSTCATYGDQDNVVLDENSVQLPINAYGASKRAIEDMLRDYGAAFGLRHVIFR 167 >gi|282163533|ref|YP_003355918.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282155847|dbj|BAI60935.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 306 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 5/112 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L S D +I+ AA V ++ ++P N G + AA I +Y S+ + Sbjct: 61 ILMHSADAVIHCAAQIYVSRSMEDPLFDAQNNIIGTLNLLNAARKADIKRFVYFSSAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 R P+DE P PL+ YG SKLAGE+ + Y ++R +YS Sbjct: 121 GDPVRLPVDESHPQEPLSPYGASKLAGEKYALMFHRAYGLPSTVIRPFNIYS 172 >gi|99081322|ref|YP_613476.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] gi|99037602|gb|ABF64214.1| NAD-dependent epimerase/dehydratase [Ruegeria sp. TM1040] Length = 319 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 12/151 (7%) Query: 2 KCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + + L + +D E++ GR D+DL + + + + PD II AA Sbjct: 13 RIFVAGHRGMVGGAVLRRLAEEDCEVVTAGREDLDLTRQQAVMEWMAATRPDAIIMAAAR 72 Query: 61 TAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFS-- 116 KA + + F + N + +A+AA + + +++ + ++ + PI E S Sbjct: 73 VGGIKANSDYPVDFLLQNLQIETNLAEAAHAADVQRFLFLGSSCIYPKFAPQPIPEASLL 132 Query: 117 -----PTNPLNIYGKSKLAGEEKVASYTNNY 142 P+N Y +K+AG + + +Y Y Sbjct: 133 TGALEPSN--EWYAVAKIAGIKLMQAYRQQY 161 >gi|260428865|ref|ZP_05782842.1| UDP-glucose 4-epimerase [Citreicella sp. SE45] gi|260419488|gb|EEX12741.1| UDP-glucose 4-epimerase [Citreicella sp. SE45] Length = 327 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F ++ P +++ AA + V +A EP + N EG+ + +AA + G + Sbjct: 51 DLSDRARLDEVFATYQPVAVMHFAALSQVGEAMSEPGRYWRNNVEGSLTLIEAATAAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ ST + +DE +P PLN YG SK A E Sbjct: 111 NFVFSSTCATYGEHDNVVLDESTPQEPLNAYGASKRAVE 149 >gi|257091018|ref|ZP_05585379.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] gi|256999830|gb|EEU86350.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] Length = 330 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 70 VLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 130 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 177 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 178 ASIGEDH--TPET--HIVPIILQVA--LSQRAELSIFGDDYDTPDG 217 >gi|320157615|ref|YP_004189994.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] gi|87578245|gb|ABD38627.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] gi|319932927|gb|ADV87791.1| probable dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] Length = 290 Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust. Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 32/236 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-------------------PDIDLLKPKD 41 MK L++G G + SL + + +I G +ID+ Sbjct: 1 MKLLILGATGMLGYSLFANLSEQEKITVFGTVRSLKGKENFFDSYKDQIISNIDVYDIHS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV+IN + A INA +A D ++ STD Sbjct: 61 LESAISQVKPDVVINCIGLIKQHSISKQHIDAVKINALLPHELANLCDRFNARLVHFSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G ++ P + ++YGKSK GE SY N++ LRT+ + S+ L Sbjct: 121 CVFTGEKGLYTEDDLP-DARDLYGKSKCLGE---VSY-GNHLTLRTSIIGHELNSSVSLV 175 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L+++ F G PT IA+ +A ++ NS+ L G++H++ D Sbjct: 176 DWFLSQQGSTKGFSKAVFSGLPTC--YIAKL---LAETILPNSE--LNGLYHLSVD 224 >gi|321312938|ref|YP_004205225.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5] gi|320019212|gb|ADV94198.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5] Length = 309 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D +++ AA VD E +N EG + + +GI + + S+ VF Sbjct: 61 DAVVHLAAMVGVDSCRSNEEDVIKVNFEGTKNVTEVCKELGIKTLLFSSSSEVFGDSPDY 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 P E S P + YGK+KL EE + + + +R ++++G Sbjct: 121 PYTESSQKLPKSAYGKAKLKSEEYLKEQASASLHVRVVRYFNVYG 165 >gi|225010971|ref|ZP_03701437.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] gi|225004878|gb|EEG42834.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] Length = 265 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ D + PD IIN D + ++ A +N+ + +S I Sbjct: 35 DVTNITDLENILFKLKPDFIINCIGLLK-DASNNDFSKAIYLNSFLPQWLLSYCNSNEIR 93 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I++STD VF+G +E P N + YGKSKL GE ++N++ +RT+ + Sbjct: 94 LIHVSTDCVFNGNDGNYHEESKP-NANDNYGKSKLLGEYN----SHNHLCIRTSIIGPEL 148 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR----GI 210 +N + K++ E++ + L ++ AII TS++ G+ Sbjct: 149 KNNGVGLFCWFLKQKGEVNGFSKSIWGGVTTLVLSEAII-----------TSIKKDYTGL 197 Query: 211 FHMTADGGPVSWADFAEYI 229 H+T +G +S D I Sbjct: 198 VHLT-NGKTISKFDLLSLI 215 >gi|319947245|ref|ZP_08021478.1| UDP-glucose 4-epimerase [Streptococcus australis ATCC 700641] gi|319746487|gb|EFV98747.1| UDP-glucose 4-epimerase [Streptococcus australis ATCC 700641] Length = 332 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + G+ I S+ G+ Sbjct: 70 DAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYIVFSSTAATYGIPEEI 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P P+N YG+SKL E + +Y YV LR +++ G Sbjct: 130 PILETTPQKPINPYGESKLMMETIMRWADQAYGIKYVPLR---YFNVAGAKPDGSIGEDH 186 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ +RE IS+ D + TP Sbjct: 187 GPETHLLPIVLQVAQGKREKISIFGDDYQTP 217 >gi|253702102|ref|YP_003023291.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251776952|gb|ACT19533.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 292 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 27/155 (17%) Query: 1 MKCLVIGNNGQIAQSLSS-----------------------MCVQDVEIIRVGRPDIDLL 37 MK LV+G G + +L + Q VE I VG +D Sbjct: 1 MKVLVLGATGMLGHTLMTRLSERGDFTVHGTARSREGLDRWFAPQVVERISVG---VDAD 57 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 PDV+IN +P I+ INA +A A + G I+ Sbjct: 58 NFDSILRVLGEVRPDVVINCVGIIKQLPVAKDPVISIGINALFPHRLALACKAAGARLIH 117 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ISTD VF G R E ++ ++YG+SK GE Sbjct: 118 ISTDCVFRG-DRGGYTEDDQSDAEDLYGRSKFLGE 151 >gi|77862423|gb|ABB04490.1| QnlA [Escherichia coli] Length = 295 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 11/169 (6%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 S PDV+IN + + A INA +A+ + I STD VFDG Sbjct: 69 SVDPDVVINCIGLIKQHEISKQHVEAIKINALLPHQLAEVCNKYNAKLIQFSTDCVFDG- 127 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + E N ++YGKSK GE ++ LRT+ + S+ L L+ Sbjct: 128 KKGLYRESDTPNSTDLYGKSKCLGEVNYGK----HLTLRTSIIGHELNSSVSLIDWFLS- 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + E++ + IA+ +A +I N SL+GI+H++A+ Sbjct: 183 QSTEVNGYSKAIFSGLPTCYIAKL---LAEKIIAND--SLKGIYHLSAN 226 >gi|322389795|ref|ZP_08063340.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 903] gi|321143519|gb|EFX38952.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 903] Length = 332 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + G+ I S+ G+ Sbjct: 70 DAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYIVFSSTAATYGIPEEI 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P P+N YG+SKL E + +Y YV LR +++ G Sbjct: 130 PILETTPQKPINPYGESKLMMETIMRWADQAYGIKYVPLR---YFNVAGAKPDGSIGEDH 186 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ +RE IS+ D + TP Sbjct: 187 GPETHLLPIVLQVAQGKREKISIFGDDYKTP 217 >gi|296505690|ref|YP_003667390.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] gi|296326742|gb|ADH09670.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] Length = 318 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D++ + F D +++ AA + VD++ EPE+ S N G + AA + GI Sbjct: 39 VDIVDRQAVNQLFEQEKFDYVVHFAAESHVDRSITEPEVFISTNVLGTQVLLDAAKAFGI 98 Query: 94 -PCIYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L P F +P P + Y SK + + V +Y + Sbjct: 99 TKFVHVSTDEVYGELDFDPTTFFTEETPLQPNSPYSASKASSDLLVRAYHETF 151 >gi|149050199|gb|EDM02523.1| TDP-glucose 4,6-dehydratase (predicted), isoform CRA_c [Rattus norvegicus] Length = 212 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++++ AA T VD + +N G + A + IY+STD V+ G Sbjct: 93 DIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEKFIYVSTDEVYGGSLDQ 152 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 153 EFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 197 >gi|254474410|ref|ZP_05087796.1| UDP-glucose 4-epimerase [Ruegeria sp. R11] gi|214028653|gb|EEB69488.1| UDP-glucose 4-epimerase [Ruegeria sp. R11] Length = 320 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F ++ P +++ AA + V +A EP +S N G+ + +AA + G + ++ ST + Sbjct: 62 FATYEPVAVMHFAALSQVGEAMSEPGRYWSNNVGGSLTLIEAAVAAGCLDFVFSSTCATY 121 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 +DE +P +PLN YG SK A E+ + AS+ VI R Sbjct: 122 GEHDNVVLDESTPQHPLNAYGASKRAVEDILRDFGASHGLRSVIFR 167 >gi|126732873|ref|ZP_01748664.1| UDP-glucose 4-epimerase [Sagittula stellata E-37] gi|126706649|gb|EBA05723.1| UDP-glucose 4-epimerase [Sagittula stellata E-37] Length = 327 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL+ F + P +++ AA + V +A +P + + N G+ + +AA G + Sbjct: 51 DLMDRARLDEVFRKYEPAAVMHFAALSQVGEAMAKPGMYWRNNVCGSLTLIEAAVEAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE +P PLN YG SK A E+ + A+Y +VI R Sbjct: 111 DFVFSSTCATYGEHDNVVLDENTPQEPLNAYGASKRAVEDILRDFGAAYGLRHVIFR 167 >gi|289767387|ref|ZP_06526765.1| polysaccharide biosynthesis protein [Streptomyces lividans TK24] gi|289697586|gb|EFD65015.1| polysaccharide biosynthesis protein [Streptomyces lividans TK24] Length = 295 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 23/194 (11%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLS 48 M LV+G +G + L +S V RP ++DL S Sbjct: 25 MTVLVVGGSGFLGTELVRQASAAGHRVAATFATRPCDGPEATWHEVDLRDGARVEEVVAS 84 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + V+IN ++ +A +++ AEG+ +A A +++S+D VF G S Sbjct: 85 LAHCVVINASSGSA----------DWAVTAEGSVRLAMTAVKYACRLVHVSSDAVFSG-S 133 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K A E + VI RT+ + S + + LA Sbjct: 134 RVHYDESCLPDPVTPYGAAKAAAETGIRLLAPAAVIARTSLIIGGIQSEHVRLVHDLATG 193 Query: 169 RREISVVCDQFGTP 182 R ++ D P Sbjct: 194 SRTGALFTDDVRCP 207 >gi|119718422|ref|YP_925387.1| GDP-mannose 4,6-dehydratase [Nocardioides sp. JS614] gi|119539083|gb|ABL83700.1| GDP-mannose 4,6-dehydratase [Nocardioides sp. JS614] Length = 340 Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N A + V + DEPE G + +A ++GI Sbjct: 64 DLTDAANLIRLLHRIQPDEVYNLAGQSHVGASFDEPEHTAITTGVGPLTLLEAIRTVGID 123 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 C Y ++ G + DE SP PL+ YG +KL +Y Y Sbjct: 124 CRFYQASSSAMYGAATGAQDECSPFRPLSPYGAAKLHAYWSTVTYREGY 172 >gi|327459775|gb|EGF06115.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1057] Length = 333 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEIMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADRAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|289669730|ref|ZP_06490805.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 357 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 5/113 (4%) Query: 31 RPDIDLL--KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 RP+ L + + A ++ D +++ AA AV ++ EP + F+ N G A+ +A Sbjct: 19 RPEFHCLDVRAPELADLMITKRIDAVLHFAALKAVGESVREPLLYFNNNVTGTLALLRAM 78 Query: 89 DSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + C ++ S+ V+ +R+ I+E +P +N YG++KL EE + + Sbjct: 79 RTAKF-CNLVFSSSATVYGDANRSTIEENAPLKAINPYGRTKLMMEEMIGDLS 130 >gi|302836329|ref|XP_002949725.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f. nagariensis] gi|300265084|gb|EFJ49277.1| hypothetical protein VOLCADRAFT_43537 [Volvox carteri f. nagariensis] Length = 227 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 30/244 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEG--AGAIAKAADSIGIPC---IYISTDYVFDGLS 108 ++N AA + E PE+A S+N A + A G+ C I+ STD V+DG S Sbjct: 1 VVNCAAVSQPGVCESSPEVARSVNVPSHLAHCMLDQARRRGL-CATLIHFSTDQVYDG-S 58 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLLSM 162 E P P+N YGK+K E+ S ILR + +Y + + FL + Sbjct: 59 HALWKEGEPCGPVNTYGKTKWEAEQLPES--TPVAILRASIIYGPPPPDPVNRALFLQFV 116 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--V 220 + + + D++ +P + R + ++ IF++ GGP + Sbjct: 117 ASAVRGSQPTAFFEDEWRSPIYVRDLERLVTRLLAPWQHR-------IFNV---GGPERL 166 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S D A + + G Y + T PA +D S+L + + R + ++ Sbjct: 167 SRVDMARQV---ADALGCGYDAILATSTASVNRGVASPADISMDVSRLTDGLHFRTTPFR 223 Query: 281 EGVR 284 E ++ Sbjct: 224 EALK 227 >gi|225873413|ref|YP_002754872.1| NAD dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] gi|225791223|gb|ACO31313.1| NAD dependent epimerase/dehydratase family protein [Acidobacterium capsulatum ATCC 51196] Length = 349 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 7/149 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + D + + AA A D+ +I ++ N + +A A G+P Sbjct: 49 DLRDGARVEQVFAAHRFDAVFHCAAALAHGLHIDKQDI-WTSNVDATRLLAGTAQRHGVP 107 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTA 148 I++ST+ ++ P+ E P P+ IYG+SK AGE+++A N V+LR Sbjct: 108 KFIFLSTNCLWARNLGHPVAEDEPPQPVEIYGESKWAGEKELARIAENGGSMDIVMLRCP 167 Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCD 177 + L + E + + VV D Sbjct: 168 TIIDSGRLGLLAILFEFIHENKTVWVVGD 196 >gi|77862409|gb|ABB04477.1| UDP-2-acetamido-2,6-dideoxy-L-lyxo-4-hexulose reductase [Yersinia kristensenii] Length = 290 Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 27/174 (15%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+IN + + A IN+ +A D I+ STD VFDG +T Sbjct: 67 PDVVINCIGLIKQHEIAKQYVPAIKINSLLPHQLAALCDKYEARYIHFSTDCVFDG--KT 124 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF--LLSMLR-LA 166 + +E N +IYGKSK GE ++ LRT SI G +S++ Sbjct: 125 GLYNELDLPNSTDIYGKSKYLGEVNYGR----HLTLRT----SIIGHELSSAVSLIDWFL 176 Query: 167 KERREISVVCDQF--GTPTS--ALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 K++ E++ G PTS A +A I+ D SL G++H++ D Sbjct: 177 KQQNEVNGFSKAIFSGLPTSYIAKLLAEKIL---------VDNSLTGLYHLSVD 221 >gi|118576196|ref|YP_875939.1| nucleoside-diphosphate-sugar epimerase [Cenarchaeum symbiosum A] gi|118194717|gb|ABK77635.1| nucleoside-diphosphate-sugar epimerase [Cenarchaeum symbiosum A] Length = 299 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 14/165 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------GRPDIDLLKPKDFASFFLSF- 49 MK V G G I ++ + + V GR ++ +D A+ + Sbjct: 1 MKYAVTGGAGFIGGHIARHLLDRGHSVTVIDSNDAVDLEGRVELHRADIRDAAALRRALD 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D + + AA +V ++ E+ +N G + A+ +GI ++ S+ ++ + Sbjct: 61 GTDGVFHQAALVSVQESFSNQELYHQVNVNGTENVLAASLDLGIKTVWASSSSIYGDATS 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVY 151 PI E S +P+ YG++K GE +K AS V LR VY Sbjct: 121 LPIGEDSVRDPVTPYGETKAQGEVLADKYASMGARIVSLRYFNVY 165 >gi|242279503|ref|YP_002991632.1| UDP-glucose 4-epimerase [Desulfovibrio salexigens DSM 2638] gi|242122397|gb|ACS80093.1| UDP-glucose 4-epimerase [Desulfovibrio salexigens DSM 2638] Length = 328 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 44/257 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEI---IRVGRPDI---------DLLKPKDFASF 45 + LV G G I ++ M + DV + + G + DL P+D A Sbjct: 5 LSLLVCGGAGYIGSHMTRMIAEAGHDVTVFDNLSTGHAEALKWGKFVQGDLRNPEDLAKL 64 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F S D + + + V ++ ++P + N G + +A G+ ++ ST V+ Sbjct: 65 FAENSFDAVFHFSGLIVVSESVEKPFEYYDNNVTGTLNLLQAMRKHGVNKFVFSSTAAVY 124 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SIFG 155 I E P PLN YG++KL EE + Y Y + + Y S G Sbjct: 125 GEPVMEMITEDHPLKPLNPYGRTKLQVEEILQDYAVAYGLNSVCFRYFNAAGAHPDSTIG 184 Query: 156 S----------NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 N LLS + E R + + + TP R I I ++ D Sbjct: 185 EAHSPETHLIPNILLSCI---DEGRRLKIFGSDYPTPDGT--CVRDYIHI----LDLCDA 235 Query: 206 SLRGIFHMTADGGPVSW 222 L+ I M ++ G S+ Sbjct: 236 HLKAIGFMDSNKGAHSF 252 >gi|315031673|gb|EFT43605.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0017] Length = 238 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|91201760|emb|CAJ74820.1| Similar to dTDP-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 319 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 22/174 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV G G I +L +++ V+ + G+ + ID+ K Sbjct: 1 MKILVTGGAGFIGSNLVDQLIEEGHRVAVVDDLSTGKEENIHKKAEFYNIDICDAKSLEE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIST-DY 102 F P+++ + AA+ V K+ + P +IN G+ + + ++ + IY ST Sbjct: 61 VFKQIKPEIVNHHAAHANVRKSVETPVYDANINILGSLNLCQLSNKYRVKKFIYASTGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYS 152 V+ + P +E +P PL+ YG SK E + Y N ILR VY Sbjct: 121 VYGEPKQLPANESTPPEPLSHYGVSKHTVEHYLHVFHKLYDLNVTILRYPNVYG 174 >gi|315143284|gb|EFT87300.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2141] Length = 310 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 176 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 177 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 215 >gi|325687949|gb|EGD29969.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK72] Length = 333 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFIRGVFAKHPSIDAVIHFAAFSLVAESMVDPLRYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|301301044|ref|ZP_07207204.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851314|gb|EFK79038.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 331 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AAY+ V ++ +P F N G + + + I ++ ST + L Sbjct: 69 DAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLEVMNEFSIDKIVFSSTAATYGILEEV 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P NP+N YG+SKL E+ + +Y +V LR +++ G Sbjct: 129 PIKETTPQNPINPYGESKLMMEKIMRWADEAYGIKFVPLR---YFNVAGAKPDGSIGEDH 185 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A +R+ + + D + TP Sbjct: 186 MPETHLLPIVLQVAMGKRDKLQIFGDDYNTP 216 >gi|294794174|ref|ZP_06759310.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|294454504|gb|EFG22877.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 306 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 19/173 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD----------IDLLKPKDFAS 44 M+ V G G I L ++D ++V G + +D+ PK + S Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGHTVQVIDNLYTGNKEFVHSKAQFVELDIRDPKLY-S 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYV 103 F PD I + AA T V + +P + IN G + AA + + + S+ V Sbjct: 60 VLEEFRPDYIFHEAAQTEVSTSMSDPMLDCDINLIGLINLLNAAVKLDVKKFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 + L P++E NP + YG +KL E + Y + + + YS +FG Sbjct: 120 YGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYICYRYSNVFG 172 >gi|146276632|ref|YP_001166791.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] gi|145554873|gb|ABP69486.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] Length = 328 Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + + P +++ AA + V ++ +P + +N GA + +A + G+ Sbjct: 52 DLMDRASIDAALEEWKPVAVMHFAALSLVGESMRDPATYWRVNVNGALNLLEATVAQGVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE +P P+N YG SK A EE +A++ ++ + T + Y Sbjct: 112 NFVFSSTCATYGDQDGVVLDEDTPQRPINAYGASKRAIEEMLANFGASFGLNHTIFRY 169 >gi|312877249|ref|ZP_07737217.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] gi|311795963|gb|EFR12324.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] Length = 305 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 23/218 (10%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDAYLDCSINVLGTVNLLDYCAKYKVKKFIFASSAAVYGEPEYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYS----IFGSNFLLSMLRL 165 E P P + YG SKL EE + + +N Y+I R + VY FG ++S+ Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRCSNVYGPRQDPFGEGGVVSIF-- 186 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ER + S FG T + +A +TS+ G F+++ G VS + Sbjct: 187 -CERMQSSKNVIIFGDGTQTRDFIY-VEDVAEANCVALETSVSGTFNLST-GKNVSVNEL 243 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 E + S G S VY+ P + A+SCL Sbjct: 244 FEIL---SGLTGYKKSPVYQ------PKRPGDIAHSCL 272 >gi|257077481|ref|ZP_05571842.1| UDP-glucose 4-epimerase [Enterococcus faecalis JH1] gi|256985511|gb|EEU72813.1| UDP-glucose 4-epimerase [Enterococcus faecalis JH1] Length = 208 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 29 VLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 88 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 89 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 136 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 137 ASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 176 >gi|23008164|ref|ZP_00049723.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Magnetospirillum magnetotacticum MS-1] Length = 308 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 7/136 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGI 93 DL +P + A+ D +++ A PE F S N E +A+AA + Sbjct: 51 DLARPMNMAAALTGA--DAVVHSAGL--AHAMSGAPEDDFRSSNTEATRHLAEAAQRAKV 106 Query: 94 P-CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 +++S+ G S +P+ E P + YG+SKLA E+ +A ++V LR VY Sbjct: 107 GRFVFLSSIRAQSGPSASSPLSETDAPAPTDAYGRSKLAAEQALAEIGLDWVALRPVLVY 166 Query: 152 SIFGSNFLLSMLRLAK 167 + ++LRLA+ Sbjct: 167 GAGVKGNMAALLRLAR 182 >gi|262282500|ref|ZP_06060268.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] gi|262261791|gb|EEY80489.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] Length = 333 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 217 >gi|297585313|ref|YP_003701093.1| NAD-dependent epimerase/dehydratase [Bacillus selenitireducens MLS10] gi|297143770|gb|ADI00528.1| NAD-dependent epimerase/dehydratase [Bacillus selenitireducens MLS10] Length = 282 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 8/137 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G N I S +D + +V + + D K +F+S+ D I++ A Sbjct: 3 RILITGKNSYIGNSFEKWLAKDPQRYKVDKISVRDDSWKKINFSSY------DTILHVAG 56 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + + + + ++ + +N + A IA A G+ ++ G ID+ +PT Sbjct: 57 IAHLSERKVDKDLYYKVNRDLAINIANKAKDEGVKQFIFTSSMSVYGKETGIIDKDTPTM 116 Query: 120 PLNIYGKSKLAGEEKVA 136 P + YGKSKL E ++ Sbjct: 117 PKSNYGKSKLEAERLIS 133 >gi|115350817|ref|YP_772656.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] gi|115280805|gb|ABI86322.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD] Length = 320 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 22/181 (12%) Query: 52 DVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIP-CIYIST-DYVFDGL 107 D +I+ AA V + + +P+ AF + N G +A+AA G+ +Y S+ V + Sbjct: 65 DCVIHLAARVHVMRDDSPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAVGESD 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLSML 163 S P+ E P +P + YG+SKL E+++A + + VI+R VY G + + L Sbjct: 125 SGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAGLDVVIVRPPLVY---GPHVTANFL 181 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAII---QIAHNLIE-NSDTSLRG-IFHMTADGG 218 R+ + V P ++ R+I+ +A L++ +D G FH+ D Sbjct: 182 RM------MDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDA 235 Query: 219 P 219 P Sbjct: 236 P 236 >gi|297581699|ref|ZP_06943621.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae RC385] gi|297534106|gb|EFH72945.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae RC385] Length = 288 Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 32/234 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-----IRVGRPD-------------IDLLKPKDF 42 MK LVIG +G + SL S + + +R + + ID+ Sbjct: 1 MKVLVIGASGMLGYSLFSNLSEKKNLNVFGTVRANQLNEHFQGYETSIFTGIDVDDFSTI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S S P ++N A SIN+ +A D + I+ STD Sbjct: 61 ESVIKSLKPQFVLNCVGLIKQHDVAKNHVAAISINSLLPHKLAALCDMVSAKLIHFSTDC 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF G +E +P + +++YG SK GE + N++ LRT+ + SN L Sbjct: 121 VFTGKQGMYTEETAP-DSVDLYGLSKKLGEVEYG----NHLTLRTSIIGHELNSNLSLID 175 Query: 163 LRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L++E + F G PT I Q+ I +SD + G++H++ Sbjct: 176 WFLSQEGQVKGFTKAIFSGLPTC------YIAQLLSEKIFDSD--INGLYHLSV 221 >gi|237743445|ref|ZP_04573926.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 7_1] gi|229433224|gb|EEO43436.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 7_1] Length = 327 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 51/280 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + + G N +I +L ++VE + ++D L F S +I+ AA + Sbjct: 26 QVVAFGRNEKIGHTLID---ENVEFFKGDIDNLDDL-------FRASQDCSAVIHAAALS 75 Query: 62 AV-DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---RTPIDEFSP 117 V + ED +++N G + + + + +++S+ ++ G DE Sbjct: 76 TVWGRWED----FYNVNVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLNVKEDEAPK 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--------- 168 N LN Y KSK+ E + S NY+I+R ++ I ++ + +L L K+ Sbjct: 132 ENDLNYYIKSKIMAENIIKSSNLNYIIIRPRGLFGIGDTSIIPRLLDLNKKIGIPLFVDG 191 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +++I + C + AL++A +EN+ S R I+++T D P+ + + Sbjct: 192 KQKIDITCVE--NVAYALRLA----------LENNQYS-REIYNITND-EPIEFKEILTL 237 Query: 229 IFWESAERG----------GPYSKVYRIFTKQYPTKAHRP 258 F E G P IF K + K P Sbjct: 238 FFNEMGTEGKYLKWNYNLISPLVSFLEIFYKFFGIKKEPP 277 >gi|194476949|ref|YP_002049128.1| UDP-glucose-4-epimerase [Paulinella chromatophora] gi|171191956|gb|ACB42918.1| UDP-glucose-4-epimerase [Paulinella chromatophora] Length = 350 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 +F S D +I+ A AV ++ P + +N G+ + K + G I S+ Sbjct: 79 NFLFHSSIDAVIHFAGLKAVGESRTNPLDYWGVNVNGSYTLLKVMAAHGCRTIVFSSSAT 138 Query: 104 FDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G R PI E +P P+N YG+SK A E+ +A Sbjct: 139 LYGYPQRVPIPEDAPIAPINPYGQSKAAVEQLLA 172 >gi|296242085|ref|YP_003649572.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM 11486] gi|296094669|gb|ADG90620.1| NAD-dependent epimerase/dehydratase [Thermosphaera aggregans DSM 11486] Length = 335 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 Q+L S VQ V + DL +P+ F + + D++I+ AAY + + Sbjct: 40 QTLLSKNVQPVYM--------DLGRPETFPN--VVKDTDILIHLAAYYTFT---GKKTLY 86 Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + +N + +A+ A G+ IY S+ + P DE +P NP YG+SKL E Sbjct: 87 YKLNVDATKILAEQALKHGVKRFIYCSSTEAIGPVDNPPGDEETPPNPQFDYGRSKLLAE 146 Query: 133 EKVASYTNN---YVILRTAWVY 151 +K+ N Y I+R + +Y Sbjct: 147 QKIKEIAANGLSYTIIRPSGLY 168 >gi|1877424|gb|AAB49738.1| UDP-galactose 4-epimerase [Streptococcus mutans] Length = 333 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F S +PDV +I+ AAY+ V ++ +P F N G + + G+ Sbjct: 53 LADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGE 132 I S+ G+ + PI E +P P+N YG+SKL E Sbjct: 113 YIVFSSTAATYGIPNEIPIKETTPQRPINPYGESKLMME 151 >gi|256956469|ref|ZP_05560640.1| UDP-glucose 4-epimerase [Enterococcus faecalis DS5] gi|256946965|gb|EEU63597.1| UDP-glucose 4-epimerase [Enterococcus faecalis DS5] Length = 173 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 5 VLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 64 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 65 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 112 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 113 ASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 152 >gi|229547302|ref|ZP_04436027.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] gi|229307578|gb|EEN73565.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis TX1322] Length = 185 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 6 VLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 65 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 66 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 113 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 114 ASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 153 >gi|317401450|gb|EFV82082.1| NAD dependent epimerase/dehydratase [Achromobacter xylosoxidans C54] Length = 325 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 13/125 (10%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DIDLL + D +++ AA + +D P AF +N EG + +A Sbjct: 67 DIDLLNDA-------MYGMDGVVHLAAMWLL-HCKDFPRTAFHVNIEGTFNVLEACVRNN 118 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRT 147 I +Y S+ V+ P+ E P N N YG SK+AGE ++ + +YV LR Sbjct: 119 IKRLVYSSSASVYGDAVEVPMTEAHPFNNRNFYGASKIAGEAMCHAFHDRYGLSYVGLRY 178 Query: 148 AWVYS 152 VY Sbjct: 179 MNVYG 183 >gi|302532487|ref|ZP_07284829.1| predicted protein [Streptomyces sp. C] gi|302441382|gb|EFL13198.1| predicted protein [Streptomyces sp. C] Length = 327 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%) Query: 40 KDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIY 97 +D+ L+ + D + + A + ++ +P F +NA + A +G+ +Y Sbjct: 51 RDYGETLLALRNADAVFHLAGNASGTESVADPRRDFHLNALATCNVGNACLELGVRRLVY 110 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +S+ V+ R+PI E PT P YG SKL+GE + S + TA + + G + Sbjct: 111 LSSAIVYGTPRRSPIHEDHPTRPFLPYGASKLSGELTLRS------LHATAGLPVVTGRS 164 Query: 158 FLL 160 F++ Sbjct: 165 FVV 167 >gi|158521859|ref|YP_001529729.1| UDP-glucose 4-epimerase [Desulfococcus oleovorans Hxd3] gi|158510685|gb|ABW67652.1| UDP-glucose 4-epimerase [Desulfococcus oleovorans Hxd3] Length = 337 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 1/101 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F +F+PD +I+ A AV ++ +P ++ N G+ + +A ++ G+ Sbjct: 58 VDMRDRAELDRVFKTFAPDAVIHFACLKAVGESTTDPLTYYANNVAGSVVLFEAMEAAGV 117 Query: 94 PCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 I S+ G T P+ E + P N YG++K EE Sbjct: 118 KNIVFSSSATVYGDPETVPVTEAAAICPCNPYGRTKRMIEE 158 >gi|323341570|ref|ZP_08081806.1| UDP-glucose 4-epimerase [Lactobacillus ruminis ATCC 25644] gi|323091006|gb|EFZ33642.1| UDP-glucose 4-epimerase [Lactobacillus ruminis ATCC 25644] Length = 331 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 40/219 (18%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRVG----------RPDIDL----LKPKDFASF 45 M LV+G G I + ++ + Q +++ V RP+ L K F Sbjct: 1 MAVLVLGGAGYIGSHTVDRLVEQGQDVVVVDSLVTGHKAAVRPEAKFYQGDLADKPFMRK 60 Query: 46 FLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 S +P D +I+ AA++ V ++ +P F N G + + + I S+ Sbjct: 61 VFSENPEIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMHEFNVNYIVFSSTAA 120 Query: 104 FDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG--- 155 G+ + PI E P NP+N YG+SKL E+ + +Y +V LR +++ G Sbjct: 121 TYGIPEKMPIKEDDPQNPINPYGESKLMMEKIMRWADQAYGVKFVALR---YFNVAGAKP 177 Query: 156 -----------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ +RE + + + + TP Sbjct: 178 DGSIGEDHHPETHLLPIVLQVAQGKREKLQIFGNDYNTP 216 >gi|167757833|ref|ZP_02429960.1| hypothetical protein CLOSCI_00164 [Clostridium scindens ATCC 35704] gi|167664487|gb|EDS08617.1| hypothetical protein CLOSCI_00164 [Clostridium scindens ATCC 35704] Length = 353 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+I+N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 78 KLFEEEHPDIIVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIKRYHQVSTDE 137 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK A + V +Y Y Sbjct: 138 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 181 >gi|15610600|ref|NP_217981.1| dTDP-glucose 4,6-dehydratase RMLB [Mycobacterium tuberculosis H37Rv] gi|15843059|ref|NP_338096.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis CDC1551] gi|31794640|ref|NP_857133.1| dTDP-glucose 4,6-dehydratase RmlB1 [Mycobacterium bovis AF2122/97] gi|121639384|ref|YP_979608.1| putative dTDP-glucose 4,6-dehydratase rmlB1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663329|ref|YP_001284852.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148824674|ref|YP_001289428.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis F11] gi|167966769|ref|ZP_02549046.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis H37Ra] gi|215405503|ref|ZP_03417684.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis 02_1987] gi|215428971|ref|ZP_03426890.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|215432434|ref|ZP_03430353.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis EAS054] gi|215447803|ref|ZP_03434555.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T85] gi|218755243|ref|ZP_03534039.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|224991880|ref|YP_002646569.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800509|ref|YP_003033510.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 1435] gi|254234055|ref|ZP_04927380.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis C] gi|254366065|ref|ZP_04982110.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis str. Haarlem] gi|254552568|ref|ZP_05143015.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188519|ref|ZP_05765993.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|260202647|ref|ZP_05770138.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T46] gi|260206835|ref|ZP_05774326.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289445064|ref|ZP_06434808.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289449168|ref|ZP_06438912.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|289555734|ref|ZP_06444944.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 605] gi|289576200|ref|ZP_06456427.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289747297|ref|ZP_06506675.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 02_1987] gi|289752188|ref|ZP_06511566.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|289755597|ref|ZP_06514975.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289759627|ref|ZP_06519005.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis T85] gi|289763646|ref|ZP_06523024.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|294995762|ref|ZP_06801453.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis 210] gi|297636123|ref|ZP_06953903.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 4207] gi|297733123|ref|ZP_06962241.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN R506] gi|306777812|ref|ZP_07416149.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu001] gi|306782530|ref|ZP_07420867.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu002] gi|306786349|ref|ZP_07424671.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu003] gi|306790718|ref|ZP_07429040.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu004] gi|306795247|ref|ZP_07433549.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu005] gi|306799436|ref|ZP_07437738.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu006] gi|306805283|ref|ZP_07441951.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu008] gi|306809468|ref|ZP_07446136.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu007] gi|306969576|ref|ZP_07482237.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu009] gi|306973930|ref|ZP_07486591.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu010] gi|307081639|ref|ZP_07490809.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu011] gi|307086245|ref|ZP_07495358.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu012] gi|313660454|ref|ZP_07817334.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN V2475] gi|81668708|sp|O06329|RMLB_MYCTU RecName: Full=dTDP-glucose 4,6-dehydratase gi|2104387|emb|CAB08730.1| dTDP-GLUCOSE 4,6-DEHYDRATASE RMLB [Mycobacterium tuberculosis H37Rv] gi|13883403|gb|AAK47910.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis CDC1551] gi|31620237|emb|CAD95680.1| PROBABLE DTDP-GLUCOSE 4,6-DEHYDRATASE RMLB1 [Mycobacterium bovis AF2122/97] gi|121495032|emb|CAL73518.1| Probable dTDP-glucose 4,6-dehydratase rmlB1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599584|gb|EAY58688.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis C] gi|134151578|gb|EBA43623.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis str. Haarlem] gi|148507481|gb|ABQ75290.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148723201|gb|ABR07826.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis F11] gi|224774995|dbj|BAH27801.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322012|gb|ACT26615.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 1435] gi|289417983|gb|EFD15223.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289422126|gb|EFD19327.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CPHL_A] gi|289440366|gb|EFD22859.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 605] gi|289540631|gb|EFD45209.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis K85] gi|289687825|gb|EFD55313.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 02_1987] gi|289692775|gb|EFD60204.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis T92] gi|289696184|gb|EFD63613.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289711152|gb|EFD75168.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis GM 1503] gi|289715191|gb|EFD79203.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis T85] gi|308213896|gb|EFO73295.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu001] gi|308324847|gb|EFP13698.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu002] gi|308329101|gb|EFP17952.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu003] gi|308332909|gb|EFP21760.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu004] gi|308336569|gb|EFP25420.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu005] gi|308340444|gb|EFP29295.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu006] gi|308344308|gb|EFP33159.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu007] gi|308348199|gb|EFP37050.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu008] gi|308352923|gb|EFP41774.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu009] gi|308356766|gb|EFP45617.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu010] gi|308360711|gb|EFP49562.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu011] gi|308364326|gb|EFP53177.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis SUMu012] gi|323717948|gb|EGB27137.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis CDC1551A] gi|326905310|gb|EGE52243.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis W-148] gi|328460240|gb|AEB05663.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis KZN 4207] Length = 331 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D +++ AA + VD A D PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTDEVYGDLELDD 131 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 R E +P NP + Y +K + V ++ +Y + T Sbjct: 132 RARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRAT 170 >gi|292493592|ref|YP_003529031.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] gi|291582187|gb|ADE16644.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] Length = 349 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 22/174 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFF----------- 46 MK L+ G G I Q L + + IRV +++ K P F Sbjct: 1 MKALITGATGFIGQHLVATLLPRGNSIRVLVRNVEKAKAIWPTSSLGVFQGDLAESLTLG 60 Query: 47 -LSFSPDVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 L D + + A+ + V D + + + ++ EG G + K A G+ I+IS+ Sbjct: 61 NLCEGVDTVFHLASGSFVEDDDSGEAERLHRKVSVEGTGELLKLAAQAGVKRFIFISSVK 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYS 152 R +DE SP P YG++KLA E V Y + LR VY Sbjct: 121 AMGEGGRECLDEASPAAPQTAYGRAKLAAERVVLEAGRTYGMQVCNLRLPMVYG 174 >gi|228961525|ref|ZP_04123135.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798143|gb|EEM45146.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 318 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 4/113 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D++ + F D +++ AA + VD++ EPE+ S N G + AA + GI Sbjct: 39 VDIVDRQAVNQLFEQEKFDYVVHFAAESHVDRSIAEPEVFISTNVLGTQVLLDAAKAFGI 98 Query: 94 -PCIYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L P F +P P + Y SK + + V +Y + Sbjct: 99 TKFVHVSTDEVYGELDFDPTTFFTEETPLQPNSPYSASKASSDLLVRAYHETF 151 >gi|298247134|ref|ZP_06970939.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297549793|gb|EFH83659.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 327 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 16/148 (10%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII------RVGRPDIDLL--------KPKDFASF 45 MK LV G G I + ++ + + +++ R R I L Sbjct: 1 MKVLVTGGTGYIGSHTVRELTARGYDVVVIDTLERSSRQTIGSLPFYQGSITDDAFLERV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD-YVF 104 F P +I+ AAY A ++ EPE F N G+ ++ + + I S+ VF Sbjct: 61 FAQEKPGAVIHFAAYKAPGESMLEPEKYFRTNVGGSISLLETMARHQVRFIVFSSSCSVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ P+ E +P +P ++YG++KL GE Sbjct: 121 GTPTQLPVTENAPFSPESVYGETKLMGE 148 >gi|315578878|gb|EFU91069.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0630] Length = 251 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 1 MLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 60 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 61 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 108 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D T I I+Q+A L + ++ S+ G + T DG Sbjct: 109 ASIGEDH----TPETHIVPIILQVA--LSQRAELSIFGDDYDTPDG 148 >gi|291333300|gb|ADD93008.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S04-C163] Length = 138 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 6/136 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKP-KDFASFFLSFSP-DVIINP 57 MK LV G+ G + + LS + ++ EII DI L K DF + S DV I+ Sbjct: 1 MKILVTGSEGFLGKILSKKLLLEGHEIIPY---DISLGKDILDFKQLYEDMSNCDVCIHL 57 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AA + AE PE+ IN + + + A+ + + ++ ST + E SP Sbjct: 58 AAIADLYIAEVNPELTLKINVKATEKLIQFANELDVRILFSSTVCAYGNNGEDISTESSP 117 Query: 118 TNPLNIYGKSKLAGEE 133 P IY KSK+ E+ Sbjct: 118 LAPTEIYAKSKVEAEK 133 >gi|217963421|ref|YP_002349099.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290892640|ref|ZP_06555632.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|217332691|gb|ACK38485.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290557700|gb|EFD91222.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|307572004|emb|CAR85183.1| galE [Listeria monocytogenes L99] Length = 327 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII-----RVGRPDI----------DLLKPKDFAS 44 M +V+G G I + ++ + + E++ R G + D+ +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHKKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + D +I+ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 61 VFEKETVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 178 GSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|298386241|ref|ZP_06995797.1| carbohydrate oxidoreductase [Bacteroides sp. 1_1_14] gi|298260618|gb|EFI03486.1| carbohydrate oxidoreductase [Bacteroides sp. 1_1_14] Length = 304 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ A+ D+IIN + ++D P+ A INA + K AD +G Sbjct: 62 VDVTDKDAVANLVRETRSDLIINCIG-VLIKGSKDHPDNAIFINAYFPHLLKKLADEVGA 120 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 I++STD VF G + +E + +IYG+SK GE Sbjct: 121 KLIHVSTDCVFSG-KKGNYNESDFRDADDIYGRSKALGE 158 >gi|227555560|ref|ZP_03985607.1| UDP-glucose 4-epimerase [Enterococcus faecalis HH22] gi|227175308|gb|EEI56280.1| UDP-glucose 4-epimerase [Enterococcus faecalis HH22] Length = 251 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 23 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 82 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG--- 155 + PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 83 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALR---YFNVAGAKK 139 Query: 156 -----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+S+ D + TP Sbjct: 140 DASIGEDHTPETHIVPIILQVALGQRAELSIFGDDYDTP 178 >gi|75907331|ref|YP_321627.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75701056|gb|ABA20732.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] Length = 342 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 70/310 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRV------------GRP--------DIDLLKP 39 MK LV G G + L S+ + + E+I V G P DI + P Sbjct: 1 MKILVTGTEGYLGCLLPSLLIGKGHEVIGVDTGYYKVGWLYNGTPITAKTLNKDIRHITP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D + I++ A + + P I + IN G+ +A A ++G+ +Y+ Sbjct: 61 EDLEGV------EAIVHMAELSNDPTGQLAPNITYDINHIGSVRLANLAKTMGVRRFVYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG 155 S+ V+ + + E SP NP Y + K E V ++ +R A + FG Sbjct: 115 SSCSVYGVATEGDVTEASPVNPQTAYAECKTLVERDVTLLADDDFSPTFMRNA---TAFG 171 Query: 156 SN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAH 197 ++ L ++ LA +EI ++ D GTP AL I +AI+ I H Sbjct: 172 ASPRMRFDIVLNNLAGLAWTTKEIKMISD--GTPWRPLVHALDICKAIVCALEAPRDIVH 229 Query: 198 NLIEN-SDTS----LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 N + N DT+ ++ I + AD P F + G ++ YR+ ++ Sbjct: 230 NQVFNVGDTTNNYRVKEIAQIIADTFPGCKLSFGD---------NGADNRSYRVSFEKIN 280 Query: 253 TKAHRPAYSC 262 T P + C Sbjct: 281 TVL--PGFKC 288 >gi|315930948|gb|EFV09923.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 327] Length = 324 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLTNVFKQEKIDAVVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|114328380|ref|YP_745537.1| GDP-mannose dehydratase family protein [Granulibacter bethesdensis CGDNIH1] gi|114316554|gb|ABI62614.1| GDP-mannose dehydratase family [Granulibacter bethesdensis CGDNIH1] Length = 323 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 8/135 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINP 57 + LV G+ G + L + Q P + D+ + +F PD I+ Sbjct: 11 RILVTGSGGFVGSHLLPILRQSFPQAVFDAPRLSDGFDITDTVALEARIAAFQPDACIHL 70 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSRT--PID 113 AA A P+ A+ +N G+ +A A G +Y+ST ++ R+ P+D Sbjct: 71 AAIAAPVIVRQNPDAAWKVNLHGSLGLANAILKHVPGCVLLYVSTADLYGASFRSGIPLD 130 Query: 114 EFSPTNPLNIYGKSK 128 E +P P+N+YG +K Sbjct: 131 ENAPPAPMNLYGATK 145 >gi|15606348|ref|NP_213727.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] gi|2983546|gb|AAC07120.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] Length = 327 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F F PD +++ AAY V ++ EP + N + + G+ Sbjct: 51 DLADKETLRRVFEEFKPDAVMHFAAYIVVPESVKEPLKYYRNNVVNTINLLEVMQEFGVN 110 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR 146 S+ G+ + P+ E +P NP+N YG++K E + N NYV LR Sbjct: 111 KFVFSSSAAVYGIPESIPVKEDAPLNPINPYGETKATVERILRDLKNSGKDFNYVSLR 168 >gi|163782189|ref|ZP_02177188.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] gi|159882721|gb|EDP76226.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] Length = 332 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F F PD +++ AAY V ++ EP + N + + + G+ Sbjct: 57 DLAYKDKLREVFGEFKPDAVMHFAAYIVVPESVREPLKYYRNNVVNTINLLEVMEEFGVD 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILR 146 I+ S+ V+ + P+ E +P NP+N YG++K E + +N+ YV LR Sbjct: 117 KFIFSSSAAVYGIPEKIPVSEGAPLNPINPYGETKATVERILRDLSNSGKDFRYVSLR 174 >gi|313896221|ref|ZP_07829774.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 137 str. F0430] gi|320529279|ref|ZP_08030369.1| dTDP-glucose 4,6-dehydratase [Selenomonas artemidis F0399] gi|312975020|gb|EFR40482.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 137 str. F0430] gi|320138453|gb|EFW30345.1| dTDP-glucose 4,6-dehydratase [Selenomonas artemidis F0399] Length = 336 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 11/109 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 + F PDV+IN AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 ALFEREKPDVVINFAAESHVDRSIENPEIFLQTNIIGTSILLDACRKYGITRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNYVI 144 V+ L P+D F+ PL+ Y SK + V +Y Y I Sbjct: 128 VYGDL---PLDRPDLFFTEETPLHTSSPYSSSKAGADLLVQAYARTYGI 173 >gi|209528200|ref|ZP_03276669.1| UDP-glucose 4-epimerase [Arthrospira maxima CS-328] gi|284051661|ref|ZP_06381871.1| UDP-glucose 4-epimerase [Arthrospira platensis str. Paraca] gi|209491366|gb|EDZ91752.1| UDP-glucose 4-epimerase [Arthrospira maxima CS-328] Length = 332 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V VE+I+ D LL F S D +++ AAY V ++ PE + N G Sbjct: 49 VLKVELIQGDTNDRLLLD-----QLFSSRKIDAVMHFAAYAYVGESVTNPEKYYRNNVVG 103 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + A +S GI S+ G+ + PI E P NP++ YG SKL E +A + Sbjct: 104 TLTLLGAMNSAGIDKFVFSSTCATYGVPQIIPIPENHPQNPISPYGASKLMVERILADFD 163 Query: 140 NNYVILRTAWVY 151 Y + ++ Y Sbjct: 164 TAYNLRSVSFRY 175 >gi|159042009|ref|YP_001541261.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920844|gb|ABW02271.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 311 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVI + AA V + PE+ F+ N + +A + + ++ S+ V+ Sbjct: 69 DVIFHFAANPEVRVSTVSPEVHFNENVVATFNLLEAMRRMDVREIVFASSSSVYGEPEEI 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLLS--MLR 164 P+ E +PT P+++YG SK A E + +Y+ Y VILR A V + + ++ +++ Sbjct: 129 PVSEDAPTRPVSVYGASKAACENLIHAYSRLYGMKAVILRYANVVGLRLRHGVIYDLIMK 188 Query: 165 LAKERREISVVCD 177 L K+ + V+ D Sbjct: 189 LRKDPTRLEVLGD 201 >gi|7638445|gb|AAF65473.1|AF253311_1 UDP-galactose 4-epimerase [Bradyrhizobium japonicum] Length = 337 Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V + +P + N G++ AA G+ I+ ST V+ R Sbjct: 68 DSIIHFAGSVVVPDSMRDPLGYYRNNTMTTGSLLNAAVKGGVSRFIFSSTAAVYGNPDRV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E +PT PL+ YG SKL E + +++ +YV+LR Sbjct: 128 PVPEIAPTRPLSPYGSSKLMTEIMLHDVASAHGMSYVVLR 167 >gi|325685523|gb|EGD27615.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 329 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 17/150 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M+ LV+G G I V D ++ + G + +DLL A Sbjct: 1 MRILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDQKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEE 133 G+ + PI E +P NP+N YG++K+ E+ Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEK 150 >gi|322370658|ref|ZP_08045214.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] gi|320549616|gb|EFW91274.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] Length = 327 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 ++ +D + L+ S DV+++ AA + V ++ PE+A+ +N +G +A + Sbjct: 57 IRERDRLTDALAGS-DVVVHLAAVSGVKNCDENPELAYEVNVQGTNNVAWFCWRETAALV 115 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + + V P+ SP P+N YG++K+ GE V Sbjct: 116 FPFSVAVLGTPESMPVTVDSPRTPMNWYGRTKVLGERAV 154 >gi|256846409|ref|ZP_05551866.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium sp. 3_1_36A2] gi|256718178|gb|EEU31734.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium sp. 3_1_36A2] Length = 327 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 26/176 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 ++IN G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNINVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L K+ +++I + C + Sbjct: 145 AENIIKSSNLNYMIIRPRGLFGVGDTSIIPRLLELNKKIGIPLFVDGKQKIDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 AL++A +EN+ S R I+++T D P+ + + F E +G Sbjct: 203 VAYALRLA----------LENNQYS-REIYNITND-EPIEFKEILTLFFNEMGTKG 246 >gi|15679777|ref|NP_276895.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622920|gb|AAB86255.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] Length = 336 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +IN AA + VD++ ++PEI N G + +A+ G+ I ISTD V+ + Sbjct: 74 DAVINFAAESHVDRSIEDPEIFIRTNILGTQTLLEASRKHGVERFIQISTDEVYGSAEKG 133 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V +Y Y Sbjct: 134 YFTEETPLAPNSPYSASKASADLMVRAYHRTY 165 >gi|172056419|ref|YP_001812879.1| UDP-glucose 4-epimerase [Exiguobacterium sibiricum 255-15] gi|171988940|gb|ACB59862.1| UDP-glucose 4-epimerase [Exiguobacterium sibiricum 255-15] Length = 332 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII-RVGRPDIDLLKPKD------------FAS 44 M LV+G G I V QDV +I + + + PK + Sbjct: 1 MAVLVVGGAGYIGSHAVYQLVDAGQDVVVIDHLKSGHREAVHPKARFYEGDIRDRAFLDT 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + D +++ AA++ V ++ + P F N G + +A + + I + ST Sbjct: 61 VFEKETIDQVVHFAAFSLVGESMEHPLAYFDNNVYGTQVLLEAMMAHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + + PI E + TNP N YG++KL E+ + +Y NYV LR Sbjct: 121 YGEQEQMPILETATTNPTNAYGETKLMMEKMMRWCETAYGLNYVALR 167 >gi|303237985|ref|ZP_07324528.1| RmlD substrate binding domain protein [Prevotella disiens FB035-09AN] gi|302481775|gb|EFL44827.1| RmlD substrate binding domain protein [Prevotella disiens FB035-09AN] Length = 336 Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 26/201 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLS 108 D +++ A T K D F +N EG A S+ +P +++S+ V+ +S Sbjct: 70 DYVVHAAGATKCLKKAD----FFRVNTEGTRHFINALLSLEMPLERFVFVSSLSVYGAIS 125 Query: 109 RT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSIFGSNFL 159 I+E P YG+SKLA E+ +A+ +N YVILR VY ++ Sbjct: 126 EQMPYKDIEENDEKCPNTAYGESKLAAEKLLATTQHNGKTLPYVILRPTGVYGPREKDYF 185 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 L +AK ++ + F + +IQ +E T RG F DG Sbjct: 186 L----MAKSIQQHTDFAVGFQRQDITFVYVKDLIQAVFLALERGKTG-RGYF--ITDGKV 238 Query: 220 VSWADFAEYIFWESAERGGPY 240 + F+ I AE G P+ Sbjct: 239 YQSSTFSNLI---RAELGNPW 256 >gi|326486494|gb|ADZ76320.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni] Length = 324 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL S F D +++ AA+ V ++ P + N G + I Sbjct: 52 DLLDTFSLTSVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNVMLENNIK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|260436535|ref|ZP_05790505.1| UDP-glucuronate 5'-epimerase [Synechococcus sp. WH 8109] gi|260414409|gb|EEX07705.1| UDP-glucuronate 5'-epimerase [Synechococcus sp. WH 8109] Length = 340 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 6/126 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + P+V++N AA V + + P N G G + + G +Y S+ Sbjct: 75 ALFAAEKPEVVVNLAAQAGVRYSLENPAAYIQSNLVGFGYLLEGCRHHGTKNLVYASSSS 134 Query: 103 VFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSN 157 V+ G P E P N P+++Y SK A E +Y++ Y + LR VY +G Sbjct: 135 VYGGNRNLPFHEQQPVNHPVSLYAASKKANELMAHTYSHLYGLPATGLRFFTVYGPWGRP 194 Query: 158 FLLSML 163 + ML Sbjct: 195 DMAPML 200 >gi|239833692|ref|ZP_04682020.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG 3301] gi|239821755|gb|EEQ93324.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium LMG 3301] Length = 377 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV GN G I + + + +V +G R D+ + Sbjct: 25 MKVLVTGNQGYIGSVMVPVLINAGHEVSGYDIGLYEHCHFEEGGAVMNVPTIRKDVRDVS 84 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + E+ + IN + A+AKAA G+ Sbjct: 85 PRDLEGF------DAVIHLAALSNDPLGNLNEELTYDINHRASVAMAKAAKRAGVGRFLF 138 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+++ + V LR A Y + Sbjct: 139 ASSCSNYGISDADLIDETGDLKPVTAYGRSKVRAEQEIRELADASFCPVYLRPATAYGV 197 >gi|218961552|ref|YP_001741327.1| putative UDP-glucose 4-epimerase [Candidatus Cloacamonas acidaminovorans] gi|167730209|emb|CAO81121.1| putative UDP-glucose 4-epimerase [Candidatus Cloacamonas acidaminovorans] Length = 323 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 10/135 (7%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 ++ R D D D S +F+ D+II+ A T + AE + I + A + Sbjct: 45 QIVRVDYD-----DVTSLLTAFTGVDIIIHNAGKTKANNAEQMFKANLGITEKIIAASNR 99 Query: 87 AADSIGIPCIYISTDYVFD-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVI 144 A+S I IY+S+ ++ P+ E P+ IYGKSKLA EE + Y I Sbjct: 100 IAESQQI--IYLSSQAASRPSINNIPVKEDELGAPITIYGKSKLAAEEVIKQKCKKYYTI 157 Query: 145 LRTAWVYSIFGSNFL 159 +R VY +FL Sbjct: 158 IRPCSVYGCGDKDFL 172 >gi|312867375|ref|ZP_07727584.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] gi|311097076|gb|EFQ55311.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] Length = 332 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 41/220 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------VEIIRVGR-----PDIDL----LKPKDFAS 44 M LV+G G I + V + V+ + G PD L +DF Sbjct: 1 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLVTGHRAAVHPDAVFYQGDLADQDFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 D+ +I+ AAY+ V ++ +P F N G + + G+ I S+ Sbjct: 61 TVFKEHADIYAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG-- 155 G+ PI E +P P+N YG+SKL E + +Y YV LR +++ G Sbjct: 121 ATYGIPEEIPILETTPQKPINPYGESKLMMETIMRWADQAYGIKYVPLR---YFNVAGAK 177 Query: 156 ------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A+ +RE IS+ D + TP Sbjct: 178 PDGSIGEDHGPETHLLPIVLQVAQGKREKISIFGDDYQTP 217 >gi|239809499|gb|ACS26221.1| unknown [uncultured bacterium] Length = 327 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 ++N A++ V ++ EP + N + A G+ ++ ST +F TPI Sbjct: 70 VLNFASFIQVGESVSEPSRYYLNNVGNTLVLLDAMVRHGVKRLVFSSTAAIFGDPQYTPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE P P+N YG+SK E+ + Y N Y Sbjct: 130 DEAHPKQPINPYGRSKWIVEQLLQDYANAY 159 >gi|157415663|ref|YP_001482919.1| hypothetical protein C8J_1344 [Campylobacter jejuni subsp. jejuni 81116] gi|157386627|gb|ABV52942.1| hypothetical protein C8J_1344 [Campylobacter jejuni subsp. jejuni 81116] Length = 324 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDTFSLTNVFKQEKIDAVVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|110668405|ref|YP_658216.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626152|emb|CAJ52607.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 341 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D++ + AAYT + AE P F N++ I + A ++G+ + + S+ V+ R Sbjct: 103 DIVFHLAAYTDTNFAE--PRQLFEENSDMTYNILEQAAAVGVDGVAFTSSSTVYGEAPRP 160 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++++P P+++YG SKLA E +++Y + + T W + Sbjct: 161 TPEDYAPLEPISVYGASKLADEGLLSTYAHTESL--TVWCF 199 >gi|17230319|ref|NP_486867.1| hypothetical protein alr2827 [Nostoc sp. PCC 7120] gi|17131921|dbj|BAB74526.1| alr2827 [Nostoc sp. PCC 7120] Length = 342 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 59/267 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRV------------GRP--------DIDLLKP 39 MK LV G G + L S+ + + E+I V G P DI + P Sbjct: 1 MKILVTGTEGYLGCLLPSLLIGKGHEVIGVDTGYYKVGWLYNGTPVTAKTLNKDIRHITP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D + I++ A + + P I + IN G+ +A A ++G+ +Y+ Sbjct: 61 EDLEGV------EAIVHMAELSNDPTGQLSPNITYDINHIGSVRLANLAKTMGVRRFVYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG 155 S+ V+ + + E SP NP Y + K E V ++ +R A + FG Sbjct: 115 SSCSVYGVATEGDVTEASPVNPQTAYAECKTLVERDVTLLADDDFSPTFMRNA---TAFG 171 Query: 156 SN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAH 197 ++ L ++ LA +EI ++ D GTP AL I +AI+ I H Sbjct: 172 ASPRMRFDIVLNNLAGLAWTTKEIKMISD--GTPWRPLVHALDICKAIVCALEAPRDIVH 229 Query: 198 NLIEN-SDTS----LRGIFHMTADGGP 219 N + N DT+ ++ I + AD P Sbjct: 230 NQVFNVGDTTNNYRVKEIAQIIADTFP 256 >gi|148259045|ref|YP_001233172.1| UDP-glucose 4-epimerase [Acidiphilium cryptum JF-5] gi|326402172|ref|YP_004282253.1| UDP-glucose 4-epimerase [Acidiphilium multivorum AIU301] gi|146400726|gb|ABQ29253.1| UDP-galactose 4-epimerase [Acidiphilium cryptum JF-5] gi|325049033|dbj|BAJ79371.1| UDP-glucose 4-epimerase [Acidiphilium multivorum AIU301] Length = 332 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P+ + F +F D +++ AA AV ++E +P + F +N G + A G+ Sbjct: 59 DIRDPEAMRAAFAAFPVDAVVHFAAKKAVGESEADPLLYFDVNILGTIRLLAAMRDAGVG 118 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 ++ S+ V+ PI E + N+YG++K+ E + + V+ +A Sbjct: 119 RLVFSSSATVYGEPDTCPISETASLRVTNVYGRTKMVMEGMIEDLSRTGVLAASA 173 >gi|46908649|ref|YP_015038.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47092763|ref|ZP_00230548.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|226225025|ref|YP_002759132.1| UDP-glucose 4-epimerase [Listeria monocytogenes Clip81459] gi|254932282|ref|ZP_05265641.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|46881921|gb|AAT05215.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47018851|gb|EAL09599.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|225877487|emb|CAS06201.1| Putative UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583839|gb|EFF95871.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|328465213|gb|EGF36476.1| UDP-glucose 4-epimerase [Listeria monocytogenes 1816] gi|332312907|gb|EGJ26002.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. Scott A] Length = 327 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII-----RVGRPDIDLLKPKDF----------AS 44 M +V+G G I + ++ + + E++ R G + K K + +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F D +I+ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 61 VFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 178 GSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|239834580|ref|ZP_04682908.1| UDP-glucose 4-epimerase [Ochrobactrum intermedium LMG 3301] gi|239822643|gb|EEQ94212.1| UDP-glucose 4-epimerase [Ochrobactrum intermedium LMG 3301] Length = 328 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD-SIGI 93 D L + SF P II+ AA V ++ +P + N G ++ +A+ + G Sbjct: 53 DTLSQDQLVAAITSFDPAAIIHFAASAYVGESVTDPAKYYRNNVGGIQSVLEASRLTGGR 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P I+ S+ + + PI E P+N YG++KL E +A Y+ Y + A Y Sbjct: 113 PVIFSSSCATYGIPNALPIREGEMQRPINPYGRTKLIAEHMLADYSAAYGLPYAALRY 170 >gi|186684947|ref|YP_001868143.1| UDP-glucose 4-epimerase [Nostoc punctiforme PCC 73102] gi|186467399|gb|ACC83200.1| UDP-glucose 4-epimerase [Nostoc punctiforme PCC 73102] Length = 338 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL+ F +++ AA V ++ P ++ N + + +G+ Sbjct: 52 DLVDTGHLYQVFAQHEFSAVLHFAASLIVPESVAHPLDYYANNTRNTLNLLRCCSVMGVN 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILR 146 I+ ST V+ + P+ E +PT P+N YG+SKL E + Y + YVILR Sbjct: 112 KFIFSSTAAVYGEVEENPVTELNPTQPINPYGRSKLMSEWLIQDYAAASSMRYVILR 168 >gi|145219459|ref|YP_001130168.1| NAD-dependent epimerase/dehydratase [Prosthecochloris vibrioformis DSM 265] gi|145205623|gb|ABP36666.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeovibrioides DSM 265] Length = 334 Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A D GI I ++ GL++ DE P +P N YGKSK Sbjct: 83 LYYDVNVQGTRNVLDAMDRKGIKSIVFTSSVAVYGLNKENPDEEHPADPFNHYGKSKWQA 142 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 143 EEVLREWYN 151 >gi|300728189|ref|ZP_07061559.1| NAD dependent epimerase/reductase-related protein [Prevotella bryantii B14] gi|299774551|gb|EFI71173.1| NAD dependent epimerase/reductase-related protein [Prevotella bryantii B14] Length = 309 Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust. Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 30/240 (12%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 + +S S +QD R+ ++DL + + D I++ A T ED Sbjct: 9 VRKSSSRRYLQDE---RIHFIELDLSDKEKLKQQLADTNFDYIVHAAGATKCLHQED--- 62 Query: 72 IAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLSRT----PIDEFSPTNPLNIY 124 + +N EG + KA + +P +Y+S+ VF + I+E +P Y Sbjct: 63 -FYKVNTEGTINLVKAILELKMPLKRLVYLSSLSVFGAVREEQPYHEIEENDVPHPNTAY 121 Query: 125 GKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLLSMLRLAKERREISV--VCDQFG 180 GKSKL E+ + S Y+ILR VY ++ + M + K+ + SV C Sbjct: 122 GKSKLEAEKFLESVNGQLSYIILRPTGVYGPKEKDYFM-MAKSIKQHIDFSVGFKCQDI- 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T L + +A+ Q D G + +DG +F++ + AE G P+ Sbjct: 180 TFIYVLDVVQAVFQAL-------DRGKSGRKYFLSDGKVYQSTEFSDLL---HAEMGKPW 229 >gi|172037276|ref|YP_001803777.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] gi|171698730|gb|ACB51711.1| UDP-glucose 4-epimerase [Cyanothece sp. ATCC 51142] Length = 331 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F +S D +++ AA+ V ++ EP+ + N + +A + I + S+ Sbjct: 68 LFQQYSIDAVMHFAAFAYVGESIKEPQKYYRNNVANTLTLLEAMKAASINKLVFSSTCAT 127 Query: 105 DGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 G+++ +PI E P NP+N YG SKL E+ + ++ NYV R Sbjct: 128 YGVAQFSPITEEHPQNPINPYGASKLMVEQILQDFSKAYDLNYVCFR 174 >gi|291543443|emb|CBL16552.1| GDP-D-mannose dehydratase [Ruminococcus sp. 18P13] Length = 310 Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+D+L+P+ ++ PD I + AA ++V + P++ +N +G + +A + Sbjct: 45 DLDILQPEAVSALLEQLKPDWIFHLAAQSSVALSWKRPQLTVDVNVKGTLNLLEAVRRLA 104 Query: 93 IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK----LAGEEKVASYTNNYVILR 146 + I + + + P+ E +P +P N+Y +K + GE +Y + + +R Sbjct: 105 HQPRVLLIGSGEEYGPVHCCPVGEDTPLHPGNVYAATKACQGMLGEIYAKAYGMDLLCVR 164 >gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 305 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 23/218 (10%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDAYLDCSINVLGTVNLLDYCAKYKVKKFIFASSAAVYGEPEYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYS----IFGSNFLLSMLRL 165 E P P + YG SKL EE + + +N Y+I R + VY FG ++S+ Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRYSNVYGPRQDPFGEGGVVSIF-- 186 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ER + S FG T + +A +TS+ G F+++ G VS + Sbjct: 187 -CERMQSSKNVIIFGDGTQTRDFIY-VEDVAEANCVALETSVSGTFNLST-GKNVSVNEL 243 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 E + S G S VY+ P + A+SCL Sbjct: 244 FEIL---SGLTGYKKSPVYQ------PKRPGDIAHSCL 272 >gi|312898305|ref|ZP_07757695.1| dTDP-glucose 4,6-dehydratase [Megasphaera micronuciformis F0359] gi|310620224|gb|EFQ03794.1| dTDP-glucose 4,6-dehydratase [Megasphaera micronuciformis F0359] Length = 333 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F + PD++IN AA + VD++ + PE N G + A GI Sbjct: 59 DIADRQTIYEIFEQYKPDIVINFAAESHVDRSIENPEAFLRTNIMGTAVLMDACRKYGIQ 118 Query: 95 CIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK A + V +Y Y Sbjct: 119 RYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 >gi|258591068|emb|CBE67363.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [NC10 bacterium 'Dutch sediment'] Length = 306 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 21/173 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV G G I + ++ V+ + G+ + +D+ + Sbjct: 1 MKVLVTGGAGFIGSHVVDALAKEGHDVAVVDDLSKGKREQVHPSARFYQVDIRNRQVLEE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD-Y 102 F + P+V+ + AA + ++ EP S+N G+ + + A + + ++IS+ Sbjct: 61 VFRAERPEVVNHHAAQGNLRRSMTEPSFDASVNIVGSLNLFELALACTVRKFVFISSGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYS 152 V+ R P+DE PT P++ YG SK E+ + + +Y ILR A VY Sbjct: 121 VYGEPQRLPVDERHPTCPMSAYGLSKYTVEQYLRLFDGSGLDYTILRYANVYG 173 >gi|256783507|ref|ZP_05521938.1| polysaccharide biosynthesis protein [Streptomyces lividans TK24] Length = 271 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 23/194 (11%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLS 48 M LV+G +G + L +S V RP ++DL S Sbjct: 1 MTVLVVGGSGFLGTELVRQASAAGHRVAATFATRPCDGPEATWHEVDLRDGARVEEVVAS 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + V+IN ++ +A +++ AEG+ +A A +++S+D VF G S Sbjct: 61 LAHCVVINASSGSA----------DWAVTAEGSVRLAMTAVKYACRLVHVSSDAVFSG-S 109 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K A E + VI RT+ + S + + LA Sbjct: 110 RVHYDESCLPDPVTPYGAAKAAAETGIRLLAPAAVIARTSLIIGGIQSEHVRLVHDLATG 169 Query: 169 RREISVVCDQFGTP 182 R ++ D P Sbjct: 170 SRTGALFTDDVRCP 183 >gi|297200084|ref|ZP_06917481.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] gi|197717212|gb|EDY61246.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] Length = 326 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +++ AA V ++ D+P + N EG + +A + G+P S+ G+ P + Sbjct: 70 VVHLAAKKQVGESVDQPLHYYRENVEGLRVLLEAVTTAGVPSFVFSSSAAVYGMPDVPLV 129 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E +P P++ YG++KLAGE Sbjct: 130 TERTPCAPMSPYGETKLAGE 149 >gi|153001486|ref|YP_001367167.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] gi|151366104|gb|ABS09104.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS185] Length = 326 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 9/138 (6%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 C+ +VE+I D K L DVI + AA A+ + P+ NA+ Sbjct: 48 CLDEVEVICGDIRDPHFCK-------HLCKDIDVIYHLAALIAIPYSYIAPDSYLDTNAK 100 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G I +AA + I+ ST V+ PIDE P P + Y SKLA + S+ Sbjct: 101 GTLNICQAALENNVSRVIHTSTSEVYGTAKYVPIDEQHPLQPQSPYSASKLAADAMAMSF 160 Query: 139 TNNYVI-LRTAWVYSIFG 155 N++ + L A ++ +G Sbjct: 161 HNSFELPLTIARPFNTYG 178 >gi|167586383|ref|ZP_02378771.1| Putative epimerase/dehydratase [Burkholderia ubonensis Bu] Length = 317 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 26/193 (13%) Query: 52 DVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 D +I+ AA V D A D N EG +A+AA +IG +Y+S+ S Sbjct: 64 DTVIHLAARVHVMRDSAVDPAAAYLETNVEGTLRVARAAHAIGARRFVYVSSIKAVGESS 123 Query: 109 --RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSI-FGSNFLLS 161 R P+ E PL+ YG SKL E + ++ + VI+R VY +NF Sbjct: 124 AGRAPLSEVDEPAPLDPYGISKLEAERGLVAFGRDSGMEIVIVRPPLVYGPGVRANFQSL 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH----NLIENSDTSLRG-IFHMTAD 216 M L+K + P A+ R++I + + L+ SD+ G +FH+ AD Sbjct: 184 MRALSK----------RIPLPIGAISARRSLIYVENLANALLVCASDSRAAGQVFHV-AD 232 Query: 217 GGPVSWADFAEYI 229 G ++ + A + Sbjct: 233 GRDLTVTELARSL 245 >gi|220920899|ref|YP_002496200.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219945505|gb|ACL55897.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 319 Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 7/124 (5%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L+ S D I++ AA + +PE A +N +G ++ AA IP + ST V+ Sbjct: 67 LARSCDGIVHLAALVGAPACDADPEQARRLNIDGTRSLVAAAPR-DIPLVVASTCSVYGR 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLL-SM 162 + E PT+PL++Y ++K E V V LR +Y + F + LL + Sbjct: 126 VRAAICTEEEPTSPLSLYAETKAVAERLVTE--RGGVALRFVTLYGVSPRFRWDLLLHTF 183 Query: 163 LRLA 166 LRLA Sbjct: 184 LRLA 187 >gi|220921001|ref|YP_002496302.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219945607|gb|ACL55999.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 368 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 D +I+ AA + + +PE+ SIN G +A AA+ G+ C ++ S+ V+ Sbjct: 70 DSVIDLAALSNDPSGDLDPELTRSINERGRTRVAMAAERAGVRCYLFASSCAVYGAGRGM 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI---FGSNFLLSMLR 164 + E +P +PL +Y ++ EE V + + LR A V+ + + +++ + Sbjct: 130 NLAEDAPLHPLTVYAQTCARAEEAVLARNCAHFTTAALRNATVFGLSPRMRFDLVVNQMT 189 Query: 165 L-AKERREISVVCD 177 L A ER I+V D Sbjct: 190 LDAHERGRITVGGD 203 >gi|78211743|ref|YP_380522.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9605] gi|78196202|gb|ABB33967.1| putative nucleotide sugar epimerase [Synechococcus sp. CC9605] Length = 339 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 6/130 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 + + F+ P V++N AA V + + P N G G + + G +Y Sbjct: 71 QGLMALFVEERPQVVVNLAAQAGVRYSLENPAAYIQSNLVGFGNLLEGCRYHGTQNLVYA 130 Query: 99 STDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSI 153 S+ V+ G P E P N P+++Y SK A E +Y++ Y + LR VY Sbjct: 131 SSSSVYGGNRNLPFHERQPVNHPVSLYAASKKANELMAHTYSHLYGLPATGLRFFTVYGP 190 Query: 154 FGSNFLLSML 163 +G + ML Sbjct: 191 WGRPDMAPML 200 >gi|24212935|ref|NP_710416.1| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] gi|45656108|ref|YP_000194.1| oxidoreductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24193606|gb|AAN47434.1| dTDP-D-glucose 4,6-dehydratase [Leptospira interrogans serovar Lai str. 56601] gi|45599341|gb|AAS68831.1| oxidoreductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 321 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 23/155 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVG---RPDI--DLLKPKDF------------ 42 MKCL+ G G + L + + + +G P+I DL PK + Sbjct: 1 MKCLITGAGGFVGSYLLKELKRSYTDFLGIGIQSGPNITEDLELPKSYRSVVCDIRNLNQ 60 Query: 43 -ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYIS 99 S FSPDVI + AA V KA ++P IN G + ++ S+ + +YIS Sbjct: 61 VCSIIHEFSPDVIFHLAAQPFVPKAVEDPGETLEINIHGTLNLLESLRSLKKKVRFVYIS 120 Query: 100 TDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGE 132 + V+ + S P+ E PLN Y SK E Sbjct: 121 SSDVYGNVPESYLPVTESVVPAPLNPYSSSKYCAE 155 >gi|328496806|dbj|BAK18578.1| UDP-galactose 4-epimerase mutant [synthetic construct] Length = 308 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRV--------GRPDIDLLKPKDFASFFLSFSP 51 M+ +V G G I L V+ E++ V G ++ + KD+ S+ Sbjct: 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDIVQRDTGGSAELHVRDLKDY-SWGAGIKG 59 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV+ + AA V + EP + F+ N + + A G+ ++ S+ V+ Sbjct: 60 DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVI 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P E P P+++YG +K AGE A+Y Sbjct: 120 PTPEEEPYKPISVYGAAKAAGEVMCATY 147 >gi|327267849|ref|XP_003218711.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Anolis carolinensis] Length = 352 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 9/131 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR 109 D++++ AA T VD A + F+ +N G + AA + IY+STD V+ G Sbjct: 90 DIVLHFAAQTHVD-ASFLHSLEFNYVNIYGTYILVGAAYEAKVEKFIYVSTDEVYGGSCD 148 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS--IFGSNFLLSML 163 DE SP P N Y SK E V SY Y +I R++ VY F + + Sbjct: 149 QEFDELSPKKPTNPYASSKAIAECFVQSYWEKYKFPVIITRSSNVYGPHQFPEKVIPKFI 208 Query: 164 RLAKERREISV 174 L ++ R+ + Sbjct: 209 SLLQQNRKCCI 219 >gi|153011731|ref|YP_001372945.1| UDP-glucose 4-epimerase [Ochrobactrum anthropi ATCC 49188] gi|151563619|gb|ABS17116.1| UDP-glucose 4-epimerase [Ochrobactrum anthropi ATCC 49188] Length = 328 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 D L + + +F P II+ AA V ++ +P + N G ++ +A+ G Sbjct: 53 DTLSQEQLIAAIRTFDPAAIIHFAASAYVGESVTDPAKYYRNNVGGIQSVLEASRLTGER 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P I+ S+ + PI E NP+N YG++KL E +A Y+ Y + A Y Sbjct: 113 PVIFSSSCATYGIPDVLPIREGEMQNPINPYGRTKLIAEHMLADYSAAYGMPYAALRY 170 >gi|187251018|ref|YP_001875500.1| UDP-glucose 4-epimerase [Elusimicrobium minutum Pei191] gi|186971178|gb|ACC98163.1| UDP-glucose 4-epimerase [Elusimicrobium minutum Pei191] Length = 324 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K + F F D +++ AA+T V ++ P + N + A GI Sbjct: 51 DLGDKKKLKTVFSKFKIDAVMHFAAFTEVGESVITPAKYYENNVAKVLNLLDAMVESGIN 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ ST F + IDE P NP+N YG++KL E + Y ++Y Sbjct: 111 YFVFSSTAATFGEPVKELIDETHPQNPINPYGRTKLMVENILKDYDHSY 159 >gi|282878383|ref|ZP_06287174.1| NAD-binding domain 4 [Prevotella buccalis ATCC 35310] gi|281299495|gb|EFA91873.1| NAD-binding domain 4 [Prevotella buccalis ATCC 35310] Length = 339 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 59/265 (22%), Positives = 98/265 (36%), Gaps = 39/265 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP---------------DIDLLKPKDFAS 44 M L+ G +G + L +Q +E+ RP ++D + Sbjct: 1 MSILITGASGFVGSHLVDEALQRGMEVWAAVRPSSSRRYLQDERIHFIELDFSSEEKLVQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTD 101 + D +++ A T +D +N EG + A + +P IYIST Sbjct: 61 QLEGHAFDYVVHAAGVTKCVHPDD----FHRVNTEGTQHLVNAILKLKMPIKRFIYISTL 116 Query: 102 YVFDGLSR----TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIFG 155 VF + T I+E P YGKSKL E + + N+ Y+ILR +Y Sbjct: 117 GVFGAIREQKPFTEINEHDTPLPNTAYGKSKLEAERYLDAIGNDFPYIILRPTGIYGPRE 176 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 ++ L + +A+ + Q T L + +A+ D + G + Sbjct: 177 KDYFLMVKSIARHLDFAAGYSRQDITFVYILDVVQAVFLAI-------DRGMSGRKYFLT 229 Query: 216 DGGPVSWADFAEYIFWESAERGGPY 240 DGG F++ I E G P+ Sbjct: 230 DGGVYQSDTFSDLI---RQELGNPW 251 >gi|312905253|ref|ZP_07764372.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0635] gi|310631444|gb|EFQ14727.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0635] Length = 251 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + F+ N G + G+ I + ST + PI Sbjct: 1 MLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAATYGEPKAMPI 60 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LSMLRLAKERRE 171 E +PTNP N YG+SKL E+ I++ W + +G ++ L +A +++ Sbjct: 61 TEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALRYFNVAGAKKD 108 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 S+ D T I I+Q+A L + ++ S+ G + T DG Sbjct: 109 ASIGEDH----TPETHIVPIILQVA--LGQRAELSIFGDDYDTPDG 148 >gi|281424721|ref|ZP_06255634.1| NAD dependent epimerase/reductase-related protein [Prevotella oris F0302] gi|281401091|gb|EFB31922.1| NAD dependent epimerase/reductase-related protein [Prevotella oris F0302] Length = 331 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R+ +++L K+ D +++ A T +D F +N +G + +A Sbjct: 44 RINFIELNLSSQKELEKQLAGHEFDYVVHAAGATKCLHTDD----FFKVNTDGTRYLVQA 99 Query: 88 ADSIGIPC---IYISTDYVFDGLS-RTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTN 140 S+ +P +Y+S+ VF + + P E S + P YGKSKL E+ + S N Sbjct: 100 LLSLKMPIRRFVYLSSLSVFGAIKEQQPYQEISEHDHPRPNTAYGKSKLMAEQYLDSIGN 159 Query: 141 N--YVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + Y+ILR VY ++ L M + K + SV Sbjct: 160 DFPYIILRPTGVYGPREKDYFL-MAKSIKGHTDFSV 194 >gi|193213689|ref|YP_001999642.1| UDP-glucose 4-epimerase [Chlorobaculum parvum NCIB 8327] gi|193087166|gb|ACF12442.1| UDP-glucose 4-epimerase [Chlorobaculum parvum NCIB 8327] Length = 328 Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%) Query: 1 MKCLVIGNNGQIAQSLS------SMCVQDVEIIRVGRPDIDLLKPKDFA----------S 44 MK LVIG G I ++ V + + GR +++L + +F S Sbjct: 1 MKILVIGGAGYIGSHVAREFLDRGYQVTVFDNLSTGR-EMNLFEEAEFVFGDILDTEAVS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYV 103 + D ++ A A ++ +PE + N GA ++ AA + GI C ++ S+ + Sbjct: 60 SVMERGFDGCVHLAGLKAAGESMVKPEKFSTTNICGAVSVINAAAASGIRCFLFSSSAAI 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 F + PIDE P +P N YG +KL E + Y Sbjct: 120 FGNPAYLPIDENHPKDPTNYYGFTKLEIERMLEWY 154 >gi|215413378|ref|ZP_03422062.1| dTDP-glucose 4,6-dehydratase rmlB [Mycobacterium tuberculosis 94_M4241A] gi|298526948|ref|ZP_07014357.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 94_M4241A] gi|298496742|gb|EFI32036.1| dtdp-glucose 4,6-dehydratase rmlb [Mycobacterium tuberculosis 94_M4241A] Length = 331 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D +++ AA + VD A D PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTDEVYGDLELDD 131 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 R E +P NP + Y +K + V ++ +Y + Sbjct: 132 RARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGV 167 >gi|323144766|ref|ZP_08079342.1| dTDP-glucose 4,6-dehydratase [Succinatimonas hippei YIT 12066] gi|322415463|gb|EFY06221.1| dTDP-glucose 4,6-dehydratase [Succinatimonas hippei YIT 12066] Length = 360 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L K S + DVI++ AA + VD++ P+ N EG + KAA + + Sbjct: 60 DILDEKLVVSLIEKYKIDVIVHFAAESHVDRSILGPDAFIKTNIEGTYCLLKAAYKMWVK 119 Query: 95 ---C----IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 C +ISTD VF LS T P E +P P + Y SK + + V ++ + Y Sbjct: 120 DGVCHGHFHHISTDEVFGTLSLTDPPFSEENPYRPNSPYSASKASSDCLVRAFVHTY 176 >gi|257869587|ref|ZP_05649240.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] gi|257803751|gb|EEV32573.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] Length = 329 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 S F + D +I+ AA + V ++ ++P F+ N G + + + I + ST Sbjct: 58 LQSVFEKETIDGLIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKDNNVDHIVFSST 117 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 + ++PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPEQSPITEETPTNPKNPYGESKLMMEKMMRWCDEAYGMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+E+++ D + TP Sbjct: 175 KSDASIGEDHDPETHLVPLILQVALGQRQELAIFGDDYDTP 215 >gi|313126393|ref|YP_004036663.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] gi|312292758|gb|ADQ67218.1| nucleoside-diphosphate-sugar epimerase [Halogeometricum borinquense DSM 11551] Length = 306 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 20/171 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF--FLSFSP-------- 51 + LV G G I +L++ E+I V D+ L P++ +S F+ S Sbjct: 5 RVLVTGGAGFIGSNLANHLADSNEVIAV--DDLHLGTPENLSSAVEFVDASVLDDDLPTE 62 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEG-AGAIAKAADSIGIPCIYISTDYVFDGLS 108 DV+ + AAY++ AE+ A +N EG A+ +A + +Y ST ++ G Sbjct: 63 GIDVLFHLAAYSSYTMAEENKRAATRVNVEGFVNAVEQAREDGCETVVYASTSSIY-GSR 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 P E P Y SKLA E+ + ++Y + LR VY +G Sbjct: 122 TEPSPEDMPVEARTCYEASKLAREQYGEYFHHHYDMTLAGLRFFSVYQGYG 172 >gi|89069787|ref|ZP_01157122.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus HTCC2516] gi|89044588|gb|EAR50704.1| putative sulfolipid biosynthesis protein [Oceanicola granulosus HTCC2516] Length = 283 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 55/227 (24%), Positives = 85/227 (37%), Gaps = 40/227 (17%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 D+P+ N EG A+ +AA G+ +++S+ V+ G P+ E + P +YG+ Sbjct: 76 DDPDGFRRANVEGTAALFEAARKAGVEAAVFLSSRAVY-GPVAGPLTETAECRPDTLYGE 134 Query: 127 SKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL 186 KLAGE+ +A+ LR VY G L + + GT Sbjct: 135 VKLAGEQALAASGLRGASLRATGVYGAPGPGLAHKWEDLFAAFARGEEIAPRIGTEVHGR 194 Query: 187 QIARAIIQI-----AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI-FWESAERGGPY 240 +A A+ A ++ SD L D AE + W AE G Sbjct: 195 DLAAAVRLALERPGAAEVLNVSDLLL----------------DRAELLALW--AEVSGVA 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V P + R Y +D +L R W+ G R +L Sbjct: 237 GRV--------PAASERAGYGEMDTGRL------RARGWRPGGRGLL 269 >gi|310657749|ref|YP_003935470.1| dTDP-glucose 4,6 dehydratase [Clostridium sticklandii DSM 519] gi|308824527|emb|CBH20565.1| dTDP-glucose 4,6 dehydratase, NAD(P)-binding [Clostridium sticklandii] Length = 349 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------------ 91 S F F D+++N AA + VD++ ++PE+ N G A+ A Sbjct: 67 SIFRRFDIDMVVNFAAESHVDRSIEDPEVFLRTNIMGTQALLDIAKDFWKIDLFDKYCKE 126 Query: 92 ---GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + +STD V+ L T + E + NP + Y SK + + V +Y+ Y Sbjct: 127 YKKGVKFVQVSTDEVYGSLGETGLFKETTCLNPNSPYSASKASADMIVRAYSETY 181 >gi|253575948|ref|ZP_04853282.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844742|gb|EES72756.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] Length = 340 Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVI+N AA + VD++ EP+I N G + AA G+ + +STD V+ L T Sbjct: 75 DVIVNFAAESHVDRSILEPDIFVKTNVLGTQVLLDAAKKHGVGKYVQVSTDEVYGSLGET 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK G+ V +Y + Sbjct: 135 GLFTEETPLAPNSPYSASKAGGDLFVRAYHETF 167 >gi|307273942|ref|ZP_07555153.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0855] gi|306509380|gb|EFM78439.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0855] Length = 282 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 32 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 91 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 92 TYGEPKAMPITEEIPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 139 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+A L + ++ S+ G + T DG Sbjct: 140 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVA--LGQRAELSIFGDDYDTPDG 189 >gi|291549980|emb|CBL26242.1| Predicted nucleoside-diphosphate sugar epimerases [Ruminococcus torques L2-14] Length = 397 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S ++ PDV+ + AA+ V ED P A N G A+AAD G+ + ISTD Sbjct: 110 SVMKTYRPDVVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKTARAADKFGVKRFVLISTD- 168 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G SK E + ++ N Y +T +V FG+ Sbjct: 169 -------------KAVNPTNIMGASKRMCEMIIQTF-NRYS--KTEYVAVRFGN 206 >gi|196248608|ref|ZP_03147308.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] gi|196211484|gb|EDY06243.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] Length = 328 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 17/163 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 ++ +DF + F + + +I+ AA + V ++ +EP + N G + + + Sbjct: 51 IRDRDFLRTVFQQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMKEFDVRQ 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWV 150 ++ ST V+ + PI E PT P N YG++KLA E+ + +Y + LR V Sbjct: 111 IVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNV 170 Query: 151 YSIFG----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 +G ++ + +L++ +R EI + D + TP Sbjct: 171 AGAYGTTIGEDHNPETHLIPLILKVPLGQREEIFIFGDDYDTP 213 >gi|86739570|ref|YP_479970.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86566432|gb|ABD10241.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 334 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA- 81 DVE++ DLL P+ A+ +S + + + AA T V ++ +P F N G Sbjct: 43 DVEVVAA-----DLLDPRQLAAAGVSRGFEGVCHLAALTRVRESRLDPVRYFQTNLTGTI 97 Query: 82 ---GAIAKAADSIGIPCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 A+ + A+ G+ ++ ST V+ + I E P +P N YG SK A E ++ Sbjct: 98 NLLAALEEGAEHTGVAPAFVFGSTCAVYGNVDLARIPETCPPDPANPYGTSKFAAERLLS 157 Query: 137 SYTN----NYVILRT 147 VILR+ Sbjct: 158 HQAGTGLLGAVILRS 172 >gi|315151697|gb|EFT95713.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0012] Length = 320 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-LS 161 + PI E +PTNP N YG+SKL E+ I++ W + +G ++ L Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYGMKYVALR 167 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A +++ S+ D TP + I I+Q+ L + ++ S+ G + T DG Sbjct: 168 YFNVAGAKKDASIGEDH--TPET--HIVPIILQVV--LGQRAELSIFGDDYDTPDG 217 >gi|310644248|ref|YP_003949007.1| dtdp-d-glucose 4,6-dehydratase, rfbb [Paenibacillus polymyxa SC2] gi|309249199|gb|ADO58766.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Paenibacillus polymyxa SC2] Length = 339 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ EPE+ N G + AA + + +STD V+ L T Sbjct: 75 DVVVNFAAESHVDRSILEPEVFVKTNVLGTQVLLDAAKKYNVTKFVQVSTDEVYGSLGET 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK G+ V +Y + Sbjct: 135 GLFTEETPLQPNSPYSASKAGGDLLVRAYHETF 167 >gi|261319272|ref|ZP_05958469.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|265986729|ref|ZP_06099286.1| Bme24 [Brucella pinnipedialis M292/94/1] gi|261298495|gb|EEY01992.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|264658926|gb|EEZ29187.1| Bme24 [Brucella pinnipedialis M292/94/1] Length = 355 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 3 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 63 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 116 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 117 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 175 >gi|170698760|ref|ZP_02889824.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] gi|170136317|gb|EDT04581.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria IOP40-10] Length = 321 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 19/160 (11%) Query: 20 CVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINPAAYTAVDKAED-EPEIAF- 74 CV V G D D L P D A+ D +I+ AA V + E +P+ AF Sbjct: 38 CVDGVREWVHGAADFDHLDEGWPADLAA-------DCVIHLAARVHVMRDESPDPDAAFD 90 Query: 75 SINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + N G +A+AA + G+ I S + +G P+ E +P + YG+SKL E Sbjct: 91 ATNVVGTLRLAQAARNHGVRRIVFASSIKAIGEGDDGVPLSEAVEPDPQDAYGRSKLHAE 150 Query: 133 EKVASYTN----NYVILRTAWVYS-IFGSNFLLSMLRLAK 167 ++A + + V++R VY +NFL M +A+ Sbjct: 151 RQLAQFGASAGLDVVVVRPPLVYGPAVRANFLRMMDAVAR 190 >gi|71906901|ref|YP_284488.1| NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] gi|71846522|gb|AAZ46018.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] Length = 284 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-------------------IIRVGRPDIDLLKPKD 41 MK LVIG +G + ++ + + E I ID+ Sbjct: 1 MKALVIGVSGMLGNAMVRVLAEAKEWEVHGTLRSPSAKRFFAPQIAARLHDGIDVDHEDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F P +++N + + D+P A INA +A+ ++ISTD Sbjct: 61 LVEIFDKVRPQLVLNCVGHVKQVETADQPLHAIPINALLPHRLARLCGLTQSRLVHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G SR E + L++YG++KL GE Sbjct: 121 CVFTG-SRGAYRESDFPDALDLYGRTKLLGE 150 >gi|85813533|emb|CAF33039.1| putative apramycin biosynthetic oxidoreductase 1 [Streptoalloteichus tenebrarius] Length = 312 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 27/160 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G G + Q++ + + D E+ VG + P + L D+ AA Sbjct: 1 MRIIVTGAAGYVGQAVLARLLHDGHELTAVGH-RRQVGWPPGVPARHL----DLTDASAA 55 Query: 60 YTAVDKAEDEPEIAFSINAEGAGA--------------------IAKAADSIGIP-CIYI 98 AVD AE +A G+GA +A+ D P +++ Sbjct: 56 RAAVDGAEAVCHLAGLTRVRGSGAAVGPYYRANVVATLNVLDALVARRRDGDDPPRVVFL 115 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 S+ V+ P+ E PT P ++YG +KLA E+ V Y Sbjct: 116 SSGAVYGPTGHAPVPESHPTAPTSVYGATKLAAEQAVGWY 155 >gi|312869708|ref|ZP_07729855.1| UDP-glucose 4-epimerase [Lactobacillus oris PB013-T2-3] gi|311094757|gb|EFQ53054.1| UDP-glucose 4-epimerase [Lactobacillus oris PB013-T2-3] Length = 331 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI----------DLLKPKDFAS 44 M LV G G I + V+ E + V G D D+ K Sbjct: 1 MAILVAGGAGYIGSHMVKNLVEHGEDVVVADNLSTGHRDAINPQAKFYEGDIRDRKFLDQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + +++ AA++ V ++ +P F N G + +A GI I S+ Sbjct: 61 IFENEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHGIKYIVFSSTAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG---- 155 G+ PI E P P+N YG SKL EE +A +Y +V LR +++ G Sbjct: 121 YGVPEHMPIKETDPQKPINPYGLSKLMMEEMMAWADKAYGIKFVALR---YFNVAGAAPD 177 Query: 156 ----------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + +L++A+ +R E+S+ D + TP Sbjct: 178 GTIGEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTP 215 >gi|94986341|ref|YP_605705.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] gi|94556622|gb|ABF46536.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] Length = 334 Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGI 93 DLL + + PD +I+ AA V ++ P + N G+ + +A + + Sbjct: 51 DLLDLEAVKGALEAHKPDAVIHFAALIEVGESMRAPGRYYRNNVVGSLNLLQAIVKTRKV 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILR 146 P ++ ST V+ PI E +P +P ++YG++KL E + ++ Y+ILR Sbjct: 111 PLVFSSTAAVYGTTDAVPIPEDAPLHPESVYGETKLMTERMIHAFHVAHGLPYIILR 167 >gi|306840753|ref|ZP_07473501.1| NAD-dependent epimerase/dehydratase [Brucella sp. BO2] gi|306289259|gb|EFM60506.1| NAD-dependent epimerase/dehydratase [Brucella sp. BO2] Length = 355 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 3 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 63 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 116 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 117 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 175 >gi|284997400|ref|YP_003419167.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] gi|284445295|gb|ADB86797.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus L.D.8.5] Length = 313 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+++N AA T VD++ +P+ + N G + +A+ G ++ISTD V+ Sbjct: 67 DLVVNFAAETHVDRSIYKPQDFVTTNVLGVINVLEASRLYGFKYVHISTDEVY---GEEC 123 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y +K + + V +Y Y Sbjct: 124 ADESSPLNPSSPYSAAKASADLFVKAYVRTY 154 >gi|256960605|ref|ZP_05564776.1| UDP-glucose 4-epimerase [Enterococcus faecalis Merz96] gi|256951101|gb|EEU67733.1| UDP-glucose 4-epimerase [Enterococcus faecalis Merz96] Length = 175 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 33 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 92 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 + PI E +PTNP N YG+SKL E+ + +Y YV LR Sbjct: 93 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALR 140 >gi|158336741|ref|YP_001517915.1| NDP-sugar dehydratase /epimerase [Acaryochloris marina MBIC11017] gi|158306982|gb|ABW28599.1| NDP-sugar dehydratase or epimerase/NAD binding domain 4, putative [Acaryochloris marina MBIC11017] Length = 310 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+L K+ S + P +I+ AA + P A +IN +G I A S+ Sbjct: 53 DILDRKNLNSIIKNIQPHWVIHLAAIHFIPYCNQNPFEASNINIQGTMNILDALRSLDCL 112 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ ST V+ + PI E ++PL+IYG SKLAGE + + Sbjct: 113 EKVLFASTAAVYPN-TNHPIAETVSSSPLDIYGLSKLAGEHLLNEF 157 >gi|325968607|ref|YP_004244799.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323707810|gb|ADY01297.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 310 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 7/119 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL KP+D + D + + AA V + PE F+ N + +A G+ Sbjct: 56 DLKKPED--ALKAVDGVDAVFHFAANPEVRVSTTNPETHFNENVVATFNLLEAMRRRGVK 113 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTA 148 ++ S+ V+ S P+ E +P P+++YG SK A E + +YT Y V+LR A Sbjct: 114 ELVFASSSSVYGEPSEIPVGEDAPIRPVSVYGASKAACENLIHAYTRLYGIRAVVLRYA 172 >gi|222109776|ref|YP_002552040.1| nad-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] gi|221729220|gb|ACM32040.1| NAD-dependent epimerase/dehydratase [Acidovorax ebreus TPSY] Length = 288 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 32/204 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII---RVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ L+ G NG + + ++ + D D L+ + L PD +++ Sbjct: 1 MRILLTGANGFTGRPFAEAARAAGRVVVPLKANLADRDALRHE-----VLETRPDAVVHL 55 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---IPCIYISTDYVFDGLSRTPIDE 114 AA + V A+D +++N G + A ++ + S+ V+ +PIDE Sbjct: 56 AAISFVGHADDG--AFYAVNTVGTCNLLVALAALPNRPQKVLLASSANVYGNCDASPIDE 113 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTN-------------------NYVILRTAWVYSIFG 155 P P+N Y SKLA E +Y N N+VI + ++ Sbjct: 114 TQPPAPVNHYAMSKLAMEHMARTYANRLPLVITRPFNYTGPGQNVNFVIPKLVDHFARKA 173 Query: 156 SNFLLSMLRLAKERREISVVCDQF 179 ++ L L + +E ++ +VC+ + Sbjct: 174 ASIALGNLHVEREFNDVQMVCNAY 197 >gi|225686243|ref|YP_002734215.1| NAD-dependent epimerase/dehydratase [Brucella melitensis ATCC 23457] gi|256043331|ref|ZP_05446266.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str. Rev.1] gi|256111662|ref|ZP_05452652.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str. Ether] gi|260564539|ref|ZP_05835024.1| Bme24 protein [Brucella melitensis bv. 1 str. 16M] gi|16740539|gb|AAL27673.1| Bme24 [Brucella melitensis] gi|225642348|gb|ACO02261.1| NAD-dependent epimerase/dehydratase [Brucella melitensis ATCC 23457] gi|260152182|gb|EEW87275.1| Bme24 protein [Brucella melitensis bv. 1 str. 16M] Length = 353 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 173 >gi|260424903|ref|ZP_05733675.2| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403591|gb|EEW97138.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 320 Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 7/108 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA T V + ++P+ N EG I +AA G+ I+ S+ V+ ++ Sbjct: 38 DAIVHLAAQTMVPASMEDPKKDMEDNIEGTVNILEAARKYGVKRIIFSSSAAVYGDIAPE 97 Query: 111 --PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+ E P P++ YG SK+ E + Y +YVI R A VY Sbjct: 98 CLPVRETEPLRPVSFYGLSKMTCENYIRLYQKAYGLSYVIFRFANVYG 145 >gi|157164925|ref|YP_001467305.1| UDP-glucose 4-epimerase [Campylobacter concisus 13826] gi|112801876|gb|EAT99220.1| UDP-glucose 4-epimerase [Campylobacter concisus 13826] Length = 327 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + F + D II+ AA+ V ++ EP + N + + A + + I+ S Sbjct: 61 DLSEIFANGKFDAIIHFAAFIEVFESMSEPLKYYLNNTANVARVLRYAKTYNVNKFIFSS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 T V+ + E +PTNP+N YG+SKL E+ + Y Sbjct: 121 TAAVYGEPDVAEVSETTPTNPINPYGRSKLMSEQIIKDY 159 >gi|254168150|ref|ZP_04874997.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469] gi|197622916|gb|EDY35484.1| hypothetical protein ABOONEI_767 [Aciduliprofundum boonei T469] Length = 285 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 19/151 (12%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDV------EIIRVGRPDIDLLKPKDFASFFLSFSPD 52 L+ G++GQ+ +S+ + D+ EI+ R ++D+L ++ D Sbjct: 2 ILITGSSGQLGSYLIESIPNSVGLDIRPSKFTEIVGDIRGNLDIL--------LKNYEID 53 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTP 111 II+ AA +V K+ ++P+ N G + + A + IYIS+ V+ P Sbjct: 54 AIIHAAAQVSVVKSVEDPKNDADNNIMGTINLLEYARKYDVEQFIYISSAAVYGEPKYLP 113 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IDE PT P + YG SKL GE Y+ Y Sbjct: 114 IDERHPTGPKSPYGLSKLTGERYSLLYSELY 144 >gi|90422938|ref|YP_531308.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisB18] gi|90104952|gb|ABD86989.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisB18] Length = 337 Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 9/66 (13%) Query: 90 SIGIPC-----IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTN 140 S+ + C I+ ST V+ + P+ E +PT PL+ YG SKL E + A++ Sbjct: 102 SVAVKCGVRRFIFSSTAAVYGNPDQVPVPEHAPTRPLSPYGSSKLMSEIMLHDTAAAHGM 161 Query: 141 NYVILR 146 NYV+LR Sbjct: 162 NYVVLR 167 >gi|254711648|ref|ZP_05173459.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94] gi|256029718|ref|ZP_05443332.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M292/94/1] Length = 353 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 173 >gi|288939982|ref|YP_003442222.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] gi|288895354|gb|ADC61190.1| NAD-dependent epimerase/dehydratase [Allochromatium vinosum DSM 180] Length = 328 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 43 ASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 A F L + D I++ AA T V + ++P + N G +AA G+ ++ Sbjct: 78 ADFLLQCAQGVDCIVHLAANTGVGPSVEDPRLDMDCNVVGTFNALEAARLNGVKRFIFAS 137 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 G PI E P +P++ YG SKLAGE ++Y + + LR VY Sbjct: 138 SGAPAGEVEPPIHEELPPHPVSPYGASKLAGEGYCSAYYRTFGIETICLRFGNVYG 193 >gi|218248089|ref|YP_002373460.1| CDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8801] gi|218168567|gb|ACK67304.1| CDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8801] Length = 386 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFD 105 + PDVI + AA V ++ E ++IN G + +A S+ PC I+I+TD +D Sbjct: 81 QWQPDVIFHLAAQPLVRRSYLESVETWNINVMGTVYVLEALKSLTTPCASIFITTDKCYD 140 Query: 106 GLSRTPIDEFSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 +R + + +PL + Y SK E +AS+ N++ Sbjct: 141 --NREWLYGYRENDPLGGYDPYSSSKAGAELAIASWRNSF 178 >gi|167461464|ref|ZP_02326553.1| dTDP-glucose 4,6-dehydratase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381927|ref|ZP_08055880.1| dTDP-glucose 4 6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154128|gb|EFX46451.1| dTDP-glucose 4 6-dehydratase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 319 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 2/98 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFD 105 + PD I++ AA + VD++ +P++ N G + +AA GI I ISTD V+ Sbjct: 70 FTLKPDAIVHFAAESHVDRSIADPDLFVRTNMLGTQVLLEAAREHGIQKYIQISTDEVYG 129 Query: 106 GLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L T + E +P P + Y SK + + SY Y Sbjct: 130 TLGETGLFTEETPLAPNSPYSASKASADLLARSYYETY 167 >gi|138895729|ref|YP_001126182.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] gi|134267242|gb|ABO67437.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] Length = 328 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 17/163 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 ++ +DF + F + + +I+ AA + V ++ +EP + N G + + + Sbjct: 51 IRDRDFLRTVFQQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMKEFDVRQ 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWV 150 ++ ST V+ + PI E PT P N YG++KLA E+ + +Y + LR V Sbjct: 111 IVFSSTAAVYGEPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNV 170 Query: 151 YSIFG----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 +G ++ + +L++ +R EI + D + TP Sbjct: 171 AGAYGTTIGEDHNPETHLIPLILKVPLGQREEIFIFGDDYDTP 213 >gi|23500184|ref|NP_699624.1| epimerase/dehydratase family protein [Brucella suis 1330] gi|161620504|ref|YP_001594390.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] gi|254699691|ref|ZP_05161519.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|254702827|ref|ZP_05164655.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|254706052|ref|ZP_05167880.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M163/99/10] gi|254712261|ref|ZP_05174072.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1] gi|254715332|ref|ZP_05177143.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1] gi|256015218|ref|YP_003105227.1| epimerase/dehydratase family protein, putative [Brucella microti CCM 4915] gi|256059353|ref|ZP_05449555.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33] gi|256157871|ref|ZP_05455789.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1] gi|256253168|ref|ZP_05458704.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94] gi|260167193|ref|ZP_05754004.1| epimerase/dehydratase family protein, putative [Brucella sp. F5/99] gi|260568260|ref|ZP_05838729.1| Bme24 protein [Brucella suis bv. 4 str. 40] gi|23463785|gb|AAN33629.1| epimerase/dehydratase family protein, putative [Brucella suis 1330] gi|161337315|gb|ABX63619.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] gi|255997878|gb|ACU49565.1| epimerase/dehydratase family protein, putative [Brucella microti CCM 4915] gi|260154925|gb|EEW90006.1| Bme24 protein [Brucella suis bv. 4 str. 40] Length = 353 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 173 >gi|323650613|gb|ADX97409.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis] Length = 318 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 9/108 (8%) Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D++IN AA K P + + +N +GA I A+S+ I I ++ G Sbjct: 61 DIVINLAAE---HKDNVRPINLYYDVNVDGAKNICSVAESLNIKTIIFTSSVAVYGFVEK 117 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSI 153 DE +P N YGKSKL E+ + NN +I+R V+ I Sbjct: 118 DTDENGVYSPFNNYGKSKLEAEKVYNEWFNNNSMKKLIIIRPTVVFGI 165 >gi|313896794|ref|ZP_07830342.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974711|gb|EFR40178.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 137 str. F0430] Length = 329 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F S + +I+ AA + V ++ ++P + F+ N G + +A G+ ++ ST V Sbjct: 61 IFTERSIEAVIHFAANSLVGESMEQPLLYFNNNVYGMQVLLEAMVRHGVDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + R PI E TNP N YG++KL E+ Sbjct: 121 YGEPKRVPIREDDETNPTNAYGETKLTMEK 150 >gi|56477621|ref|YP_159210.1| UDP-glucose 4-epimerase [Aromatoleum aromaticum EbN1] gi|56313664|emb|CAI08309.1| UDP-glucose 4-epimerase, gene: SP1607 [Aromatoleum aromaticum EbN1] Length = 339 Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +ID+ + + F ++ D +I+ AA AV ++ EP + N G A+ +A G Sbjct: 58 EIDVRESDGLKAVFGAYRVDAVIHFAALKAVGESVREPLEYYDNNIGGTIALTRAMAEAG 117 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 + + S+ G R+ PI E +P P N YG++K E+ Sbjct: 118 VYRLVFSSSATVYGDPRSMPIAESAPAAPTNPYGRTKWMTEQ 159 >gi|17989177|ref|NP_541810.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|265989754|ref|ZP_06102311.1| Bme24 [Brucella melitensis bv. 1 str. Rev.1] gi|265993138|ref|ZP_06105695.1| Bme24 [Brucella melitensis bv. 3 str. Ether] gi|265999144|ref|ZP_05465157.2| Bme24 [Brucella melitensis bv. 2 str. 63/9] gi|17985030|gb|AAL54074.1| udp-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|262764008|gb|EEZ10040.1| Bme24 [Brucella melitensis bv. 3 str. Ether] gi|263000423|gb|EEZ13113.1| Bme24 [Brucella melitensis bv. 1 str. Rev.1] gi|263092409|gb|EEZ16662.1| Bme24 [Brucella melitensis bv. 2 str. 63/9] gi|326410595|gb|ADZ67659.1| NAD-dependent epimerase/dehydratase [Brucella melitensis M28] gi|326553887|gb|ADZ88526.1| NAD-dependent epimerase/dehydratase [Brucella melitensis M5-90] Length = 355 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 3 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 63 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 116 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 117 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 175 >gi|306845699|ref|ZP_07478268.1| NAD-dependent epimerase/dehydratase [Brucella sp. BO1] gi|306274020|gb|EFM55847.1| NAD-dependent epimerase/dehydratase [Brucella sp. BO1] Length = 353 Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMKVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 173 >gi|260495347|ref|ZP_05815474.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] gi|260197125|gb|EEW94645.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] Length = 329 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------------GRPDIDL--LKPKDFAS- 44 M LV G G I + ++ E + V R ++L LK ++F + Sbjct: 1 MSILVCGGAGYIGSHIVKYLLEKNEDVVVVDNLITGHVDAVDERAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG------- 155 + PI E T P N YG+SKLA E+ N Y + TA Y ++ G Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L++A +RE IS+ D + TP Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|297570442|ref|YP_003691786.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] gi|296926357|gb|ADH87167.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] Length = 387 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 9/134 (6%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 + E++ + L P+D ++ F P+ I+N A TA+D + P +A+ N G Sbjct: 40 EFELLAPNSKQLSLRDPEDIRAWLQRFRPEFIVN-CAITALDSS---PLLAYETNYLGTI 95 Query: 83 AIAKAADSIGIPCIYISTDYVF-DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----S 137 +A+AA + IP I+ S+ V G + T D T L Y KSKL E +A Sbjct: 96 YLARAALELKIPYIHFSSAAVLPPGENLTEDDHLELTPDLPNYPKSKLLAELALAELHRK 155 Query: 138 YTNNYVILRTAWVY 151 Y +Y +R A VY Sbjct: 156 YGLDYTNIRLAVVY 169 >gi|15895435|ref|NP_348784.1| nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|15025160|gb|AAK80124.1|AE007717_1 Nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|325509581|gb|ADZ21217.1| Nucleoside-diphosphate-sugar epimerase [Clostridium acetobutylicum EA 2018] Length = 332 Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 43/184 (23%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA------------GAI 84 +K KD D+I + AA V ++ D+PE F + G G Sbjct: 56 IKNKDDLDRIFEDKYDIIYHLAASIVVQESIDDPEKTFFNDTVGTFNILERAKKQMFGQH 115 Query: 85 AKAADSIG--------IPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEK 134 K SI PC +++ST V+D T IDE P++ YG SK+A E Sbjct: 116 GKMNGSIWNIDENDEVYPCKVVFMSTCMVYDISGETGIDEQHSVKPVSPYGGSKIAAENM 175 Query: 135 VASYTNNY----VILR-------------TAWVYSIFGSNFL----LSMLRLAKERREIS 173 V SY N Y V++R V SIF NF+ +++ K+ R++ Sbjct: 176 VLSYFNAYKLPAVVIRPFNTYGPFQKSNGEGGVVSIFLKNFIDNKPINIYGSGKQTRDLL 235 Query: 174 VVCD 177 V D Sbjct: 236 FVKD 239 >gi|145593353|ref|YP_001157650.1| UDP-glucose 4-epimerase [Salinispora tropica CNB-440] gi|145302690|gb|ABP53272.1| UDP-galactose 4-epimerase [Salinispora tropica CNB-440] Length = 327 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PD-IDLLKPKDFASFFLS 48 MK LV G G I ++ M + ++ +R G PD ++ P D + ++ Sbjct: 1 MKLLVTGGAGFIGSVVTRMLLDAGHEVVVLDDLRTGHRVAVAPDATHVVAPLDDVAQVVT 60 Query: 49 FSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +++ AA A ++ PE+ + N G+ A+ A G+P ++ ST V+ Sbjct: 61 PQAGFDAVLHLAALIAAGESMVRPELYWHTNVVGSLALLDAVRVAGVPKVVFSSTAAVYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKL 129 PI E + T P N YG +KL Sbjct: 121 NPVELPISETAITAPTNTYGATKL 144 >gi|187935341|ref|YP_001885036.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B str. Eklund 17B] gi|187723494|gb|ACD24715.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B str. Eklund 17B] Length = 334 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Query: 79 EGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 +G G + ++D PC +++ST V+D IDE P P++ YG SK+A E V Sbjct: 119 DGDGWVLDSSDDT-YPCKVVFMSTCMVYDVAEDKGIDESHPVKPVSPYGGSKIAAENMVL 177 Query: 137 SYTNNY----VILRTAWVYSIF 154 SY N Y V++R Y F Sbjct: 178 SYYNAYKLPTVVIRPFNTYGPF 199 >gi|76802963|ref|YP_331058.1| nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase ) [Natronomonas pharaonis DSM 2160] gi|76558828|emb|CAI50422.1| nucleoside-diphosphate-sugar epimerase 1 (probable UDP-glucose 4-epimerase) [Natronomonas pharaonis DSM 2160] Length = 328 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRT 110 DVI + AA V K+ ++P + N +G + +AA + + + S+ V+ Sbjct: 81 DVIYHQAAQAGVRKSVEQPAKVNAYNVDGTVTLLEAARRHDVERVVLASSSSVYGKPEYL 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 P DE PT P++ YG SKLA E+ Y+ Y + Y +++G +M Sbjct: 141 PYDEAHPTTPVSPYGVSKLAAEQYARVYSEVYGLPTVGLRYFTVYGPRMRPNM 193 >gi|317131791|ref|YP_004091105.1| UDP-glucose 4-epimerase [Ethanoligenens harbinense YUAN-3] gi|315469770|gb|ADU26374.1| UDP-glucose 4-epimerase [Ethanoligenens harbinense YUAN-3] Length = 340 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D LLK S F S DV+I+ A AV ++ +P + + N G + +A G Sbjct: 61 DAALLK-----SIFEKHSIDVVIHFAGLKAVGESVQKPLLYYENNIGGVITLCRAMQEAG 115 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 + I S+ G+ +T PI E P + N YG++KL EE Sbjct: 116 VRSIIFSSSATVYGVPKTVPITEDFPLSATNPYGRTKLMTEE 157 >gi|268324701|emb|CBH38289.1| putative UDP-glucose 4-epimerase [uncultured archaeon] Length = 319 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 6/119 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DLL D +FF D + + AA V ++ I N + +A + Sbjct: 55 LDLLH-SDITAFFDGV--DAVWHLAANPEVRLGAEDTWIHLEQNVIATYNVLEAMRLKEV 111 Query: 94 PCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P I + ST V+ P E PT P+++YG SKLAGE +ASY + + + AW+Y Sbjct: 112 PRILFTSTSTVYGEAHILPTPEEYPTIPISLYGASKLAGEAFIASYCHTFEM--QAWLY 168 >gi|225628877|ref|ZP_03786911.1| UDP-glucose 4-epimerase [Brucella ceti str. Cudo] gi|261217062|ref|ZP_05931343.1| NAD dependent epimerase/dehydratase [Brucella ceti M13/05/1] gi|261220275|ref|ZP_05934556.1| Bme24 [Brucella ceti B1/94] gi|261313489|ref|ZP_05952686.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261319932|ref|ZP_05959129.1| epimerase/dehydratase [Brucella ceti M644/93/1] gi|261323312|ref|ZP_05962509.1| Bme24 [Brucella neotomae 5K33] gi|261750156|ref|ZP_05993865.1| NAD dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|261753429|ref|ZP_05997138.1| NAD dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|261756597|ref|ZP_06000306.1| NAD dependent epimerase/dehydratase [Brucella sp. F5/99] gi|265996379|ref|ZP_06108936.1| Bme24 [Brucella ceti M490/95/1] gi|294853752|ref|ZP_06794424.1| UDP-glucose 4-epimerase [Brucella sp. NVSL 07-0026] gi|225616723|gb|EEH13771.1| UDP-glucose 4-epimerase [Brucella ceti str. Cudo] gi|260918859|gb|EEX85512.1| Bme24 [Brucella ceti B1/94] gi|260922151|gb|EEX88719.1| NAD dependent epimerase/dehydratase [Brucella ceti M13/05/1] gi|261292622|gb|EEX96118.1| epimerase/dehydratase [Brucella ceti M644/93/1] gi|261299292|gb|EEY02789.1| Bme24 [Brucella neotomae 5K33] gi|261302515|gb|EEY06012.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736581|gb|EEY24577.1| NAD dependent epimerase/dehydratase [Brucella sp. F5/99] gi|261739909|gb|EEY27835.1| NAD dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|261743182|gb|EEY31108.1| NAD dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|262550676|gb|EEZ06837.1| Bme24 [Brucella ceti M490/95/1] gi|294819407|gb|EFG36407.1| UDP-glucose 4-epimerase [Brucella sp. NVSL 07-0026] Length = 355 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 3 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 63 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 116 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 117 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 175 >gi|159042036|ref|YP_001541288.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920871|gb|ABW02298.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 322 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 18/158 (11%) Query: 1 MKCLVIGNNGQIAQSL---------SSMCV------QDVEIIRVGRPDIDLLKP--KDFA 43 MK LV G G I +L S CV +DV +G +L+K ++ Sbjct: 1 MKVLVTGCGGYIGTTLVPYLMRKGYSIRCVDWLIFGEDVLSHVIGEKGFELVKADAREAG 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 S L+ D +++ AA + P++ + IN E +AK A G+ +++ Sbjct: 61 SEVLN-GVDAVVDLAAIPNDPTGDLVPQLTWQINYEARVRMAKMAKEKGVARYILASSAS 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 G +DE + NPL +Y K+ L E +V N Sbjct: 120 VYGRQSGTVDETATPNPLTVYAKANLQAEREVLPLNGN 157 >gi|119962155|ref|YP_949016.1| UDP-glucose 4-epimerase [Arthrobacter aurescens TC1] gi|119949014|gb|ABM07925.1| putative UDP-glucose 4-epimerase [Arthrobacter aurescens TC1] Length = 334 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 31/180 (17%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDI--------------DLLKPKDFASFF 46 + V G +G++ +S+ + + ++I V R I DLL P + Sbjct: 3 RIFVTGGSGRLGRSVVAGLAEAGHKVISVDRDAIPAELLPAGAEQFTADLLAPGEAERLI 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +PD +I+ AA A ++ + FS N A A+ AA G+P I ++ G Sbjct: 63 RETTPDAVIHLAAIAVPFSAPED--VIFSTNTRLAYAVVSAATDAGVPKIVTASSPTALG 120 Query: 107 LSRT--------PIDEFSPTNPLNIYGKSKLAGEEKVASYTN------NYVILRTAWVYS 152 P++E +P P N Y SKL E+ V + Y R +V S Sbjct: 121 YGSPAGWLPPSFPLNEQTPPKPWNAYALSKLIAEQTVQMFAAAQGNKIRYAAFRPCYVIS 180 >gi|71736169|ref|YP_273230.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556722|gb|AAZ35933.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 360 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYV 103 +F PD+I++ AA V ++ EP F +NA+G + +AA + G+ C ++TD V Sbjct: 82 AFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARLVKSVRGVLC--VTTDKV 139 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E P + Y SK A E + SY +Y Sbjct: 140 YKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASY 179 >gi|61806128|ref|YP_214488.1| GDP-D-mannose dehydratase [Prochlorococcus phage P-SSM2] gi|61374637|gb|AAX44634.1| GDP-D-mannose dehydratase [Prochlorococcus phage P-SSM2] gi|265525340|gb|ACY76137.1| GDP-mannose 4,6-dehydratase [Prochlorococcus phage P-SSM2] Length = 333 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL P + + P I N A + V + + PE +++A G I +A +G+ Sbjct: 56 DLTDPVNVMGVIRAVEPAEIYNLGAQSHVKVSFEMPEYTSNVDALGTLRILEAVRMLGME 115 Query: 95 C---IY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY ST ++ G+ TP+ E +P +P + YG +KL G + +Y +Y Sbjct: 116 KDVRIYQASTSELYGGVLGTPLSETTPFHPRSPYGVAKLYGYWIIKNYRESY 167 >gi|34763593|ref|ZP_00144526.1| Nucleoside-diphosphate-sugar epimerases [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886736|gb|EAA23876.1| Nucleoside-diphosphate-sugar epimerases [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 327 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 26/176 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 ++IN G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNINVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L K+ ++++ + C + Sbjct: 145 AENIIKSSNLNYMIIRPRGLFGVGDTSIIPRLLELNKKIGILLFVDGKQKVDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 AL++A +EN+ S R I+++T D P+ + + F E +G Sbjct: 203 VAYALRLA----------LENNQYS-REIYNITND-EPIEFKEILTLFFNEMGTKG 246 >gi|307544988|ref|YP_003897467.1| UDP-glucose 4-epimerase [Halomonas elongata DSM 2581] gi|307217012|emb|CBV42282.1| UDP-glucose 4-epimerase [Halomonas elongata DSM 2581] Length = 332 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+DLL+ F S D +++ AA + V ++ EP + N + Sbjct: 55 DVDLLE-----RLFREHSFDGVMHFAANSLVGESVTEPSKYYRNNVGNTLGLLDVMVRHD 109 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + I+ ST F R+PIDE P P+N YG SKL E+ ++ Y + Y Sbjct: 110 VRHFIFSSTAATFGEPERSPIDERHPQAPINPYGASKLMVEQVLSDYAHAY 160 >gi|118587025|ref|ZP_01544456.1| dTDP glucose 4, 6-dehydratase [Oenococcus oeni ATCC BAA-1163] gi|118432546|gb|EAV39281.1| dTDP glucose 4, 6-dehydratase [Oenococcus oeni ATCC BAA-1163] Length = 329 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F ++ D ++N AA + VD++ PEI N EG + + A GI + +STD V Sbjct: 71 LFKTYDFDAVVNFAAESHVDRSILHPEIFVQTNVEGTVNLLQTARKYGIKKYLQVSTDEV 130 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + L + +E SP P + Y SK A + + ++ Y Sbjct: 131 YGSLGKEGYFNEESPLAPNSPYSASKAAADLETRAFYETY 170 >gi|289647537|ref|ZP_06478880.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. aesculi str. 2250] Length = 360 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYV 103 +F PD+I++ AA V ++ EP F +NA+G + +AA + G+ C ++TD V Sbjct: 82 AFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARLVKSVRGVLC--VTTDKV 139 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E P + Y SK A E + SY +Y Sbjct: 140 YKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASY 179 >gi|227819571|ref|YP_002823542.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] gi|227338570|gb|ACP22789.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] Length = 353 Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIR-----VG---------RPDIDLLK 38 MK LV G+ G I + M +Q D ++ R G D+ ++ Sbjct: 1 MKVLVTGHKGYIGSVMVPMLLQAGHSVTGYDSDLYRRCSFDAGGDQASVPCIHKDVRDVQ 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D II+ AA + ++ +P++ + IN +G+ +AKAA G+ + Sbjct: 61 PRDLEGF------DAIIHLAALSNDPLSDLDPDVTYEINHKGSVRLAKAAKEAGVSRFLL 114 Query: 99 STDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 ++ G + I E NP+ YG SK+ E ++ ++ V R A Y + Sbjct: 115 ASSCSNYGQAGDEIVAETGELNPVTAYGWSKVLSERDISELADSSFSPVYFRPATAYGL 173 >gi|254168016|ref|ZP_04874864.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469] gi|289595956|ref|YP_003482652.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] gi|197623059|gb|EDY35626.1| hypothetical protein ABOONEI_163 [Aciduliprofundum boonei T469] gi|289533743|gb|ADD08090.1| NAD-dependent epimerase/dehydratase [Aciduliprofundum boonei T469] Length = 285 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 19/151 (12%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDV------EIIRVGRPDIDLLKPKDFASFFLSFSPD 52 L+ G++GQ+ +S+ + D+ EI+ R ++D+L ++ D Sbjct: 2 ILITGSSGQLGSYLIESIPNSVGLDIRPSKFTEIVGDIRGNLDIL--------LKNYEID 53 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTP 111 II+ AA +V K+ ++P+ N G + + A + IYIS+ V+ P Sbjct: 54 AIIHAAAQVSVVKSVEDPKNDADNNIMGTINLLEYARKYDVEQFIYISSAAVYGEPKYLP 113 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IDE PT P + YG SKL GE Y+ Y Sbjct: 114 IDERHPTGPKSPYGLSKLTGERYSLLYSELY 144 >gi|330873331|gb|EGH07480.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967160|gb|EGH67420.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYV 103 +F PD+I++ AA V ++ EP F +NA+G + +AA + G+ C ++TD V Sbjct: 82 AFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARLVKSVRGVLC--VTTDKV 139 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E P + Y SK A E + SY +Y Sbjct: 140 YKNNEWAWPYRENDPLGGKDPYSASKAAAEMIIQSYGASY 179 >gi|169351041|ref|ZP_02867979.1| hypothetical protein CLOSPI_01819 [Clostridium spiroforme DSM 1552] gi|169292103|gb|EDS74236.1| hypothetical protein CLOSPI_01819 [Clostridium spiroforme DSM 1552] Length = 631 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 18/118 (15%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 K S F F PD++ + AA+ V ED P A N G + KAAD I I Sbjct: 357 KRVDSLFKRFRPDIVYHAAAHKHVPLMEDSPNEAVKNNVFGTLNVVKAADKYNTKRFILI 416 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 STD NP N+ G +K E V SY +T +V FG+ Sbjct: 417 STD--------------KAVNPTNVMGATKRICEMIVQSYNKKS---KTEFVAVRFGN 457 >gi|148998730|ref|ZP_01826168.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP11-BS70] gi|307068481|ref|YP_003877447.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae AP200] gi|147755424|gb|EDK62473.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP11-BS70] gi|306410018|gb|ADM85445.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae AP200] Length = 233 Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ S+ D ++ A T V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKSYLEENQIDAALHCAGETVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|297250197|ref|ZP_06933888.1| UDP-glucose 4-epimerase [Brucella abortus bv. 5 str. B3196] gi|297172971|gb|EFH32345.1| UDP-glucose 4-epimerase [Brucella abortus bv. 5 str. B3196] Length = 353 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 3 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 63 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 116 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 117 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 175 >gi|238063704|ref|ZP_04608413.1| nucleoside-diphosphate-sugar epimerase [Micromonospora sp. ATCC 39149] gi|237885515|gb|EEP74343.1| nucleoside-diphosphate-sugar epimerase [Micromonospora sp. ATCC 39149] Length = 310 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++I+ AA +++K++ +P + IN G + AA G+ ++ S+ V+ + Sbjct: 74 DLVIHLAA-VSINKSQADPYESIDINMVGNHNVFAAAADHGVRRLVFASSASVYGDPKKL 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+ E P NPL Y SK AGE+ +A Y N++ LR VY Sbjct: 133 PMHEDDPLNPLTPYCISKRAGEDLLAYYQRSRGLNWIALRFFNVYG 178 >gi|28870079|ref|NP_792698.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato str. DC3000] gi|28853325|gb|AAO56393.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato str. DC3000] Length = 342 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ F + + +++ A AV ++ EP F N G+ + +A G+ Sbjct: 57 DVRSKATLHRLFTRYPVEAVVHCAGLKAVGESVREPLRYFDTNVSGSVNLCQAMAEAGVF 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNN 141 ++ S+ V+ R P+DE P P N YG SKL E + S ++ Sbjct: 117 DLLFSSSATVYGDCERMPLDENCPLGLPTNPYGHSKLMAEHVMKSVAHS 165 >gi|148263747|ref|YP_001230453.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146397247|gb|ABQ25880.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 309 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 5/107 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY-VFDGLSRT 110 +V+ + AA ++ D P + IN G I +AA GI I S+ +F L Sbjct: 68 EVVFHLAASVGNKRSIDHPILDAEINVIGTLKILEAARKFGIRKIVASSSAGIFGELKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 PI E P P + YG +KL E++ SY Y V LR VY + Sbjct: 128 PIKEDHPVEPDSPYGSTKLCMEKECLSYAKLYDLEAVCLRYFNVYGL 174 >gi|282165387|ref|YP_003357772.1| dTDP-glucose 4,6-dehydratase [Methanocella paludicola SANAE] gi|282157701|dbj|BAI62789.1| dTDP-glucose 4,6-dehydratase [Methanocella paludicola SANAE] Length = 319 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D IIN AA T VD++ D N +G + +AA I + ISTD V+ + Sbjct: 74 DEIINFAAETHVDRSIDSASDFLESNVKGVYTMLEAARKYDIKKLLQISTDEVYGSIQDG 133 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E S NP N Y +K AG+ SY N Y Sbjct: 134 SFYETSNINPSNPYSAAKAAGDLLARSYYNTY 165 >gi|269962282|ref|ZP_06176634.1| hypothetical protein VME_30180 [Vibrio harveyi 1DA3] gi|269832985|gb|EEZ87092.1| hypothetical protein VME_30180 [Vibrio harveyi 1DA3] Length = 547 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%) Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 A + + IP +++ST VFD P F N + YGK K+ E+ + Sbjct: 67 AAWLGEHCKQRNIPYLFVSTAMVFDATKNGPYGIFEERNTQDEYGKYKVRCEDAIWQTNP 126 Query: 141 NYVILRTAWV--YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 + +I R W + G+N L + R +E I+ + + A A +Q Sbjct: 127 DAMIARIGWQLHHQAEGNNMLAHLDRQHEENGVITASTAWYPATSHMDDTALAFLQ---- 182 Query: 199 LIENSDTSLRGIFHMTAD 216 LIE ++ G++H+ ++ Sbjct: 183 LIERNEA---GLYHLDSN 197 >gi|146342067|ref|YP_001207115.1| UDP-glucose 4-epimerase [Bradyrhizobium sp. ORS278] gi|146194873|emb|CAL78898.1| UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose 4-epimerase) (Galactowaldenase) [Bradyrhizobium sp. ORS278] Length = 337 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V ++ +P + + N ++ AA G+ I+ ST V+ ++ Sbjct: 68 DSIIHFAGSVVVPESVRDPLLYYRNNTMTTRSLLNAAVKRGVSRFIFSSTAAVYGNPAQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E +PT P + YG SKL E + A+Y NY +LR Sbjct: 128 PVPETAPTRPTSPYGSSKLMAEIMLHDTAAAYELNYAVLR 167 >gi|282848995|ref|ZP_06258384.1| UDP-glucose 4-epimerase [Veillonella parvula ATCC 17745] gi|282581270|gb|EFB86664.1| UDP-glucose 4-epimerase [Veillonella parvula ATCC 17745] Length = 329 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA++ V ++ P I + N G+ + ++A + GI ++ ST V+ PI Sbjct: 69 VMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIKHFVFSSTAAVYGEPKVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL EE ++ Y+ + YV LR Sbjct: 129 REDAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYVALR 166 >gi|229578477|ref|YP_002836875.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|229582930|ref|YP_002841329.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] gi|228009191|gb|ACP44953.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.G.57.14] gi|228013646|gb|ACP49407.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus Y.N.15.51] Length = 316 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +V+IN AA + VD++ +P+ + N G + +AA ++ISTD V+ Sbjct: 69 EVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRFNFNYVHISTDEVY---GEEC 125 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 126 GDENSPLNPSSPYSASKASADLFVKSYVRTY 156 >gi|148557917|ref|YP_001257418.1| putative epimerase/dehydratase family protein [Brucella ovis ATCC 25840] gi|148369202|gb|ABQ62074.1| putative epimerase/dehydratase family protein [Brucella ovis ATCC 25840] Length = 326 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+ K+A + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLRPATAYGV 173 >gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 328 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDY 102 + F PD +I+ AA V + D P + +N G + +AA +IG+ ++ S+ Sbjct: 75 AIFTQELPDAVIHLAAAAGVRPSIDNPLLYEEVNVRGTMNLLEAAKAIGVRLFLFASSSS 134 Query: 103 VFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYS 152 V+ + P E P NP++ Y +K AGE +Y + Y I LR VY Sbjct: 135 VYGNNPKVPFAEADPVDNPISPYAATKKAGELICHTYHHLYDINIACLRFFTVYG 189 >gi|163844601|ref|YP_001622256.1| hypothetical protein BSUIS_B0436 [Brucella suis ATCC 23445] gi|163675324|gb|ABY39434.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 353 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG-------------------RPDIDLLK 38 MK LV G+ G I + M + +V +G R D+ + Sbjct: 1 MKVLVTGSQGYIGSVMVPMLIDAGHEVSGYDIGLYEHCLFKEGGTVMNVPTIRKDVRDVS 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P+D F D +I+ AA + ++ ++IN + A+AKAA G+ Sbjct: 61 PRDLEGF------DAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKLAGVGRFLF 114 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 ++ G+S IDE P+ YG+SK+ E+++ + V LR A Y + Sbjct: 115 ASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADAIFCPVYLRPATAYGV 173 >gi|91773971|ref|YP_566663.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91712986|gb|ABE52913.1| NAD-dependent sugar epimerase [Methanococcoides burtonii DSM 6242] Length = 299 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 8/137 (5%) Query: 8 NNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N I + SS +DV E + V + DI +D S +S + DVII+ AA +V ++ Sbjct: 25 NEVTILDNYSSPTRKDVPEGVSVIKADI-----RDDISEHMS-NTDVIIHTAAQISVVRS 78 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +EP N G + + A I +Y S+ + + PI E P PL+ YG Sbjct: 79 MNEPFFDAQNNIMGTLNLLEEARHANIERFVYFSSAATYGNPLKVPIGETHPQEPLSPYG 138 Query: 126 KSKLAGEEKVASYTNNY 142 SKLAGE+ Y Y Sbjct: 139 ASKLAGEKYCIMYNKAY 155 >gi|296270880|ref|YP_003653512.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] gi|296093667|gb|ADG89619.1| NAD-dependent epimerase/dehydratase [Thermobispora bispora DSM 43833] Length = 303 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 21/173 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP--------DIDLLKP--KDFAS 44 M+ LV G G I +L + D V+ + GR +ID+ P +D A+ Sbjct: 1 MRALVTGGAGFIGSNLVDRLLADGHEVLVVDDLSSGRHRNPAAELHEIDVRDPALQDLAA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 + P+VI + AA +V K+ +P +N EG + +AA G +Y S+ V Sbjct: 61 ---RWRPEVICHLAAQISVRKSVADPVHDARVNVEGTINVLEAARRSGARKVVYASSVAV 117 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 + P+ + +P + Y SKL GE +A+Y Y + T V S ++G Sbjct: 118 YGRPKELPVPGDATPDPRSPYAASKLGGELYLATYRALYGLEYTTLVLSNVYG 170 >gi|260589774|ref|ZP_05855687.1| putative epimerase/dehydratase WbiI [Blautia hansenii DSM 20583] gi|260540014|gb|EEX20583.1| putative epimerase/dehydratase WbiI [Blautia hansenii DSM 20583] Length = 632 Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PD++ + AA+ V ED P A N G AKAA G+ + ISTD Sbjct: 373 TVFEKYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKTAKAASEYGVKRFVLISTD- 431 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G SK E V S+ I +T +V FG+ Sbjct: 432 -------------KAVNPTNIMGASKRLCEMIVQSFDK---ISKTEFVAVRFGN 469 >gi|310829412|ref|YP_003961769.1| dTDP-glucose 4 [Eubacterium limosum KIST612] gi|308741146|gb|ADO38806.1| dTDP-glucose 4 [Eubacterium limosum KIST612] Length = 368 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 16/116 (13%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------- 91 F D+++N AA + VD++ + PEI N G + AA ++ Sbjct: 68 GDLFQKHHFDLVVNFAAESHVDRSIENPEIFVQTNVMGTQVLLDAAKNLWQTGKDENGYP 127 Query: 92 ----GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + +STD V+ L +T + E +P P + Y SK + V +Y N + Sbjct: 128 TYREGVKYLQVSTDEVYGALGKTGMFTETTPIQPNSPYSSSKAGADLLVRAYGNTF 183 >gi|256965530|ref|ZP_05569701.1| UDP-glucose 4-epimerase [Enterococcus faecalis HIP11704] gi|256956026|gb|EEU72658.1| UDP-glucose 4-epimerase [Enterococcus faecalis HIP11704] Length = 173 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 + PI E +PTNP N YG+SKL E+ + +Y YV LR Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALR 167 >gi|254387500|ref|ZP_05002739.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294815114|ref|ZP_06773757.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|197701226|gb|EDY47038.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294327713|gb|EFG09356.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L + F F PD +I+ AA + + + + + +N G + G+ Sbjct: 49 VDILDTEALRRVFQGFRPDAVIHFAALKSSEASLRDITTYYRVNVTGTQNVLGLCAETGV 108 Query: 94 PCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 S+ G + P+DE +P P + YG+SK E +ASY Sbjct: 109 GRFVFSSSCAVYGTPQICPVDESAPVRPESPYGESKYLCERMIASY 154 >gi|259502704|ref|ZP_05745606.1| UDP-glucose 4-epimerase [Lactobacillus antri DSM 16041] gi|259169349|gb|EEW53844.1| UDP-glucose 4-epimerase [Lactobacillus antri DSM 16041] Length = 331 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +++ AA++ V ++ +P F N G + +A GI I S+ G+ PI Sbjct: 70 VVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHGIKYIVFSSTAATYGVPEHMPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG------------- 155 E P P+N YG SKL EE +A +Y +V LR +++ G Sbjct: 130 KETDPQKPINPYGLSKLMMEEMMAWADKAYGIKFVALR---YFNVAGAAPDGTIGEDHGP 186 Query: 156 -SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + +L++A+ +R E+S+ D + TP Sbjct: 187 ETHLVPIILQVAQGKRDELSIFGDDYNTP 215 >gi|254853520|ref|ZP_05242868.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-503] gi|300765024|ref|ZP_07075012.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N1-017] gi|258606893|gb|EEW19501.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-503] gi|300514324|gb|EFK41383.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N1-017] Length = 327 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|326443476|ref|ZP_08218210.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 316 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L + F F PD +I+ AA + + + + + +N G + G+ Sbjct: 38 VDILDTEALRRVFQGFRPDAVIHFAALKSSEASLRDITTYYRVNVTGTQNVLGLCAETGV 97 Query: 94 PCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 S+ G + P+DE +P P + YG+SK E +ASY Sbjct: 98 GRFVFSSSCAVYGTPQICPVDESAPVRPESPYGESKYLCERMIASY 143 >gi|169351147|ref|ZP_02868085.1| hypothetical protein CLOSPI_01926 [Clostridium spiroforme DSM 1552] gi|169292209|gb|EDS74342.1| hypothetical protein CLOSPI_01926 [Clostridium spiroforme DSM 1552] Length = 581 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 18/118 (15%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 K S F F PD++ + AA+ V ED P A N G + KAAD I I Sbjct: 306 KRVDSLFKRFRPDIVYHAAAHKHVPLMEDSPNEAVKNNVFGTLNVVKAADKYNTKRFILI 365 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 STD NP N+ G +K E V SY +T +V FG+ Sbjct: 366 STD--------------KAVNPTNVMGATKRICEMIVQSYNKKS---KTEFVAVRFGN 406 >gi|10800781|emb|CAC12984.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter xylinus] Length = 349 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 15/128 (11%) Query: 30 GRPDIDLLKPKDFASF---FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 GR +++ D AS F FSPD +++ AA + VD++ D P S N G + + Sbjct: 50 GRYRLEVANIIDAASMERIFAEFSPDAVMHLAAESHVDRSIDGPGTFVSTNIVGTYTLLE 109 Query: 87 AADSI----------GIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEK 134 AA +ISTD VF L P E +P +P + Y SK + + Sbjct: 110 AARKWWARQDAERRKAFRFHHISTDEVFGALQPGDPPFTERTPYDPRSPYSASKASSDHL 169 Query: 135 VASYTNNY 142 V ++ + Y Sbjct: 170 VRAWYHTY 177 >gi|116491429|ref|YP_810973.1| dTDP-glucose 4,6-dehydratase [Oenococcus oeni PSU-1] gi|290891009|ref|ZP_06554073.1| hypothetical protein AWRIB429_1463 [Oenococcus oeni AWRIB429] gi|116092154|gb|ABJ57308.1| dTDP-glucose 4,6-dehydratase [Oenococcus oeni PSU-1] gi|290479408|gb|EFD88068.1| hypothetical protein AWRIB429_1463 [Oenococcus oeni AWRIB429] Length = 329 Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F ++ D ++N AA + VD++ PEI N EG + + A GI + +STD V Sbjct: 71 LFKTYDFDAVVNFAAESHVDRSILHPEIFVQTNVEGTVNLLQTARKYGIKKYLQVSTDEV 130 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + L + +E SP P + Y SK A + + ++ Y Sbjct: 131 YGSLGKEGYFNEESPLAPNSPYSASKAAADLETRAFYETY 170 >gi|256027579|ref|ZP_05441413.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] gi|289765538|ref|ZP_06524916.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] gi|289717093|gb|EFD81105.1| UDP-glucose 4-epimerase [Fusobacterium sp. D11] Length = 329 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------------GRPDIDL--LKPKDFAS- 44 M LV G G I + ++ E + V R ++L LK ++F + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDNLITGHVDAVDERAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG------- 155 + PI E T P N YG+SKLA E+ N Y + TA Y ++ G Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L++A +RE IS+ D + TP Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|148657755|ref|YP_001277960.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148569865|gb|ABQ92010.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 321 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADS 90 D+ P A +P+ + + AA + ++ D P + N EG A+ + A Sbjct: 54 DIEDPYSVARAVERAAPERVYHLAAQSYPSESWDAPVVTMRTNVEGTINLLEAVRRYAPR 113 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + S +Y + TPI E PT PL+ YG SK+A Y NY Sbjct: 114 ARVHIAGTSAEYGWVRPEETPIRETHPTRPLSPYGVSKVAAGLSGLQYAANY 165 >gi|150397833|ref|YP_001328300.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150029348|gb|ABR61465.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 301 Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 4/129 (3%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 +PE N EG+ + + A + G+ C+++S+ + + + E SP P +YG+ Sbjct: 91 QDPEGFRRANLEGSVRLFEEARTAGVRRCVFLSSRAAYGDTAPPVVAETSPVAPDTLYGQ 150 Query: 127 SKLAGEEKVASYTNNYVI---LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 KLA E + S T ++ + LR VY G L + V D+ GT Sbjct: 151 VKLAAENALKSMTGHHFVTANLRITGVYGPAGEGRQHKWSDLFADYLAGRTVPDRIGTEV 210 Query: 184 SALQIARAI 192 +A+A+ Sbjct: 211 HGDDVAKAV 219 >gi|318042925|ref|ZP_07974881.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CB0101] Length = 362 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSI 91 +DL P+ A + PD++++ AA + VD++ D P N G + +A A Sbjct: 63 VDLADPQATAEAVRAADPDLVMHLAAESHVDRSIDGPAAFIESNVSGTFNLLQAVRAHWE 122 Query: 92 GIPCI--------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E +P +P + Y SK A + V+++ + Y Sbjct: 123 QLPAARRERFRFHHISTDEVFGSLGPTGRFSETTPYDPRSPYSASKAASDHLVSAWHHTY 182 >gi|225376951|ref|ZP_03754172.1| hypothetical protein ROSEINA2194_02593 [Roseburia inulinivorans DSM 16841] gi|225211272|gb|EEG93626.1| hypothetical protein ROSEINA2194_02593 [Roseburia inulinivorans DSM 16841] Length = 620 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 62/244 (25%), Positives = 97/244 (39%), Gaps = 47/244 (19%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 +R P++DL+ K F + P+++ + AA+ V ED P A N Sbjct: 336 LRRNYPELDLVVLIASVRNTKRMDLIFDKYRPEIVYHAAAHKHVPLMEDSPNEAVKNNVL 395 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + +AAD + + ISTD NP NI G +K E + +Y Sbjct: 396 GTWKVVQAADKYNVKRFVMISTD--------------KAVNPTNIMGATKRICEMIIQTY 441 Query: 139 TN----NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQ--IARAI 192 N YV +R ++ GSN S++ L K++ E G P + I R Sbjct: 442 NNRSKTEYVAVRFG---NVLGSNG--SVIPLFKKQIEA-------GGPVTVTHPDIIRYF 489 Query: 193 IQI--AHNLIENSDTSLRG--IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT 248 + I A +L+ + +G IF + G PV D A + S + P + +FT Sbjct: 490 MTIPEAVSLVLQAGAYAKGGEIFVLDM-GEPVKIVDLARNLILLSGHK--PDEDIQIVFT 546 Query: 249 KQYP 252 P Sbjct: 547 GLRP 550 >gi|114799522|ref|YP_759918.1| UDP-glucose 4-epimerase [Hyphomonas neptunium ATCC 15444] gi|114739696|gb|ABI77821.1| UDP-glucose 4-epimerase [Hyphomonas neptunium ATCC 15444] Length = 335 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 2/122 (1%) Query: 25 EIIRVGRP-DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +++R G+ + DL P D + F + PD + + AA T V ++ EP + N Sbjct: 41 DLVRWGKLIEGDLNSPGDIEAAFSAIKPDAVAHFAASTLVGESVTEPGKYYRNNTFTTLN 100 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + A I S+ G ++T + E P NP+N YG SKL E+ +A + + + Sbjct: 101 VLDAMQRHNTRAIIFSSTCAIFGHAQTEFLAEDHPKNPINPYGMSKLMVEQMLAGFDHAH 160 Query: 143 VI 144 I Sbjct: 161 GI 162 >gi|262198589|ref|YP_003269798.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262081936|gb|ACY17905.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 264 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 4/150 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G + +L + E I R + + SF +PDV+ + A Sbjct: 1 MRALVTGARGTVGSALRPVLEAAGHEFIAWDRSQVPIDDYHAMESFVRDVAPDVVYHLAI 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + +DE A+ +N E +A +G+ ++ ST VF + P S + Sbjct: 61 ASQPTGRDDE---AWLVNYEWPSEVAWITRILGVRLVFTSTVMVFSDDASGPFTRNSVPD 117 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 + YG K E++V + I+R W Sbjct: 118 AASGYGYEKRRAEDRVRHQNPDARIVRLGW 147 >gi|114769909|ref|ZP_01447519.1| probable UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] gi|114549614|gb|EAU52496.1| probable UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] Length = 324 Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust. Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 45/233 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVGRPDID------LLKPKDFA--- 43 MK L+IG G I L+ ++ D+ + V P I+ +K D + Sbjct: 1 MKILIIGAAGMIGMRLARSIIKNDFNGEIHDITLFDVIPPKIENHKNSYKIKTGDISDPN 60 Query: 44 --SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-----GAIAKAADSIGI--- 93 S ++ PD+I + AA + D AE+ E + INA+G G K S G Sbjct: 61 IISELINQKPDIIYHLAAIVSGD-AEENFEKGWDINAKGTWHLLEGIRKKFLTSNGSYKP 119 Query: 94 PCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTA 148 IY S+ VF G + I D+FSP NP YG KL GE + Y+ + V LR Sbjct: 120 KFIYASSLAVFSGPYPSAINDDFSP-NPETSYGAQKLVGEILINEYSRKGFLDGVALRLP 178 Query: 149 WVYSIFG------SNFLLSMLRLAKERREISV-----VCDQFGTPTSALQIAR 190 + G S+F S++R E + +C F +P SA++ R Sbjct: 179 TIVVRPGKPNKAASSFYSSIIREPLNGIEAILPVPENLCHWFASPLSAIRFLR 231 >gi|257052194|ref|YP_003130027.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690957|gb|ACV11294.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 315 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA T D E ++N EG + AA + + ++ S+ + + T Sbjct: 73 DTVIHLAAITGAASTHDRREETMAVNLEGTENVVTAARKLDVGNLVFASSCNNYGRAATT 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 IDE + +PLN Y ++K+A E+ VA + + Sbjct: 133 DIDETTEPDPLNPYAEAKVAAEDAVADFAD 162 >gi|222148124|ref|YP_002549081.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4] gi|221735112|gb|ACM36075.1| UDP-glucose 4-epimerase [Agrobacterium vitis S4] Length = 324 Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 1/105 (0%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDG 106 + P+ +++ AA+ AV ++ +P ++ N G+ + A G+ I + ST + Sbjct: 64 QYQPECVMHFAAFAAVGESVTDPAKYYNNNIHGSVCLLDAMRRNGVDTIVFSSTCATYGE 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E +P +P+N YG SKL E+ + Y + Y + A Y Sbjct: 124 VKSLPIVEEAPQSPVNPYGFSKLVIEQALKDYGHAYGLKWVAMRY 168 >gi|310779467|ref|YP_003967800.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309748790|gb|ADO83452.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 329 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 +L K F D +++ AAY+ V ++ ++P + N G+ + K G+ Sbjct: 51 NLADEKFMDKVFQENKIDAVMHFAAYSLVGESVEKPLKYYENNVYGSLCLLKTMKKFGVN 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + PI E T P N YG+SKLA E+ + +Y N+++LR Sbjct: 111 KIVFSSTAATYGEPENIPILETDKTEPTNPYGESKLAVEKMLKWCEKAYGINHIVLR 167 >gi|291567581|dbj|BAI89853.1| UDP-glucose 4-epimerase [Arthrospira platensis NIES-39] Length = 332 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 6/132 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V VE+I D LL F S D +++ AAY V ++ PE + N G Sbjct: 49 VLKVELIEGDTNDRLLLD-----QLFSSRKIDAVMHFAAYAYVGESVTNPEKYYRNNVVG 103 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + A +S GI S+ G+ + PI E P NP++ YG SKL E +A + Sbjct: 104 TLTLLAAMNSAGIDKFVFSSTCATYGVPQIIPIPENHPQNPISPYGASKLMVERILADFD 163 Query: 140 NNYVILRTAWVY 151 Y + ++ Y Sbjct: 164 AAYNLRSVSFRY 175 >gi|312115797|ref|YP_004013393.1| dTDP-glucose 4,6-dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311220926|gb|ADP72294.1| dTDP-glucose 4,6-dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 354 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 11/106 (10%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPC--------IY 97 +F PD IN AA T VD++ D P N G + +AA + +P ++ Sbjct: 71 TFDPDGFINLAAETHVDRSIDGPVAFIDTNINGTFRLLQAAQAHVERLPTDRRARFRFLH 130 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L T E +P +P + Y SK A + V+++ + Y Sbjct: 131 VSTDEVYGSLGETGKFHEATPYDPRSPYSASKAASDHLVSAWGHTY 176 >gi|237743174|ref|ZP_04573655.1| UDP-glucose 4-epimerase [Fusobacterium sp. 7_1] gi|229433470|gb|EEO43682.1| UDP-glucose 4-epimerase [Fusobacterium sp. 7_1] Length = 329 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------------GRPDIDL--LKPKDFAS- 44 M LV G G I + ++ E + V R ++L LK ++F + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDNLITGHVDAVDERAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG------- 155 + PI E T P N YG+SKLA E+ N Y + TA Y ++ G Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L++A +RE IS+ D + TP Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|284164514|ref|YP_003402793.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284014169|gb|ADB60120.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 322 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 ++ VG DI + +D + + DV+++ AA + VD + ++A+ +N +G Sbjct: 45 QVSSVGDVDIQHVDIRDRRALEETLEGADVVLHLAALSGVDDCDSNRDLAYEVNVQGTNN 104 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 +A G ++ + PI P +P+N YG++K+ GE V + Sbjct: 105 VAWFCRQTGAGLVFPFSMASIGDPQSFPITVDHPRDPMNWYGRTKVLGERAVET 158 >gi|147677416|ref|YP_001211631.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] gi|146273513|dbj|BAF59262.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] Length = 323 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 A +L ++ DV+ R R DI D + PD I+N AA + VD++ P Sbjct: 38 AGNLKNLEGLDVDRHRFVRGDI---ADPDVVNELAGERPDAIVNFAAESHVDRSISNPSP 94 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLA 130 N +G + +AA GI I +STD V+ L +E SP P + Y SK A Sbjct: 95 FIDSNVKGVQVLLEAARRFGIKKFIQVSTDEVYGSLGPDGAFNENSPLAPNSPYSASKAA 154 Query: 131 GEEKVASYTNNY 142 + +Y Y Sbjct: 155 ADLLCRAYYKTY 166 >gi|322516474|ref|ZP_08069394.1| UDP-glucose 4-epimerase [Streptococcus vestibularis ATCC 49124] gi|322125020|gb|EFX96429.1| UDP-glucose 4-epimerase [Streptococcus vestibularis ATCC 49124] Length = 186 Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 7/117 (5%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L +DF +PDV +I+ AAY+ V ++ ++P F N G + + + + Sbjct: 53 LADQDFMRKVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNECDVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 I S+ G+ PI E +P NP+N YG+SKL E + +Y YV LR Sbjct: 113 YIVFSSTAATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLR 169 >gi|256833082|ref|YP_003161809.1| NAD-dependent epimerase/dehydratase [Jonesia denitrificans DSM 20603] gi|256686613|gb|ACV09506.1| NAD-dependent epimerase/dehydratase [Jonesia denitrificans DSM 20603] Length = 341 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 17/149 (11%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M V+ NN A+ S E +R D D+L P L DV+++ A Sbjct: 35 MTSAVMTNNFIYARRGSREDSVWDHFEFVRGDVRDRDVLFP-------LVKDSDVVVHLA 87 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE---- 114 A + D + + P++ N G A+ +A G+ ++STD VF L P+D Sbjct: 88 AESHNDWSLENPDLFVDTNVMGTLAVLEAVRHYGVRLHHVSTDEVFGDL---PLDSGVFT 144 Query: 115 -FSPTNPLNIYGKSKLAGEEKVASYTNNY 142 SP P + Y SK + V ++T ++ Sbjct: 145 ATSPYRPSSPYSASKAGADHLVRAWTRSF 173 >gi|311741402|ref|ZP_07715226.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303572|gb|EFQ79651.1| UDP-glucose 4-epimerase [Corynebacterium pseudogenitalium ATCC 33035] Length = 320 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 23/172 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD--------------IDLLKPK 40 MK LV G G I L + V++ + V GR + D ++ Sbjct: 8 MKTLVTGGAGFIGSHLVDLLVENGHEVVVLDNFSHGRMENLVDAQASGKVVVVEDDIRTV 67 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 DF + F P+VI + AA V K+ EP N +A AA G+ I ++ Sbjct: 68 DFPALFKEHKPEVIFSLAAQIDVRKSVAEPLTDADSNISAVIRMATAAKDCGVRRIVHTS 127 Query: 101 D--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 ++ P+ E +P +P + Y SK+AGE + S++ Y L TA++ Sbjct: 128 SGGAIYGEPDSFPVSEKTPVDPKSPYAVSKVAGELYLKSFSYLYG-LETAFI 178 >gi|218885245|ref|YP_002434566.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756199|gb|ACL07098.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 356 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DLL + F S D +++ +A + V ++ EP + ++ N G + A G+ Sbjct: 60 DLLDRQTLRRVFAEHSFDAVMHFSARSLVGESVREPALYYANNVTGTLNLLDAMREAGVL 119 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ I E P P+N YG SKL E +A + Y + A Y Sbjct: 120 RLVFSSTAAVYGNPVTERIAETHPLAPVNPYGASKLMVERMLADHATAYGLRSVALRY 177 >gi|90420406|ref|ZP_01228313.1| possible NAD-dependent epimerase/dehydratase [Aurantimonas manganoxydans SI85-9A1] gi|90335134|gb|EAS48887.1| possible NAD-dependent epimerase/dehydratase [Aurantimonas manganoxydans SI85-9A1] Length = 308 Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 27/188 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDID--LLKPKDFASFFLSFSPD--- 52 M+ L+ G++G + + L + D+ ++R G P D P + A + +PD Sbjct: 1 MRILLTGSSGFVGRHLKAALAADGHDIVVLRRGGPGGDGVFAAPANLAD--IETTPDWPR 58 Query: 53 --------VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 NP TA ++N +G A+A+ A G+ +++ST V Sbjct: 59 GIDAVAHLAAANPGRGTADAADL---AALAAVNRDGTAALARRAAQEGVRRMVFVSTANV 115 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFL 159 P+DE SP P + Y +SK GE + ++ +LR V+ G + Sbjct: 116 HAAFP-DPVDEASPIAPQSAYARSKHEGERAFWQGLSGSATTGCVLRPVPVFGPGGRGGI 174 Query: 160 LSMLRLAK 167 ++ +LA+ Sbjct: 175 AALAKLAR 182 >gi|289435738|ref|YP_003465610.1| UDP-glucose 4-epimerase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171982|emb|CBH28528.1| UDP-glucose 4-epimerase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 328 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 24/167 (14%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ KDF +S F + D +++ AA + V ++ +EP + N G + + + G+ Sbjct: 52 IRDKDFLSSVFERETVDGVMHFAASSLVGESMEEPLKYLNNNVYGTQILLEVMEQFGVKN 111 Query: 96 IYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV 150 I S+ G + PI E PTNP + YG +KL E+ + +Y YV LR Sbjct: 112 IVFSSSAATYGEPEQVPIIESMPTNPESTYGDTKLIMEKMMKWCDKAYGMKYVALR---Y 168 Query: 151 YSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G S+ + +L++A +RE +++ D + TP Sbjct: 169 FNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|213966894|ref|ZP_03395044.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato T1] gi|301381576|ref|ZP_07229994.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato Max13] gi|302061668|ref|ZP_07253209.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato K40] gi|302134353|ref|ZP_07260343.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928216|gb|EEB61761.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. tomato T1] Length = 342 Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ F + + +++ A AV ++ EP F N G+ + +A G+ Sbjct: 57 DVRSKATLHRLFTRYPVEAVVHCAGLKAVGESVREPLRYFDTNVSGSVNLCQAMAEAGVF 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNN 141 ++ S+ V+ R P+DE P P N YG SKL E + S ++ Sbjct: 117 DLLFSSSATVYGDCERMPLDENCPLGLPTNPYGHSKLMAEHVMKSVAHS 165 >gi|331015366|gb|EGH95422.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 342 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ F + + +++ A AV ++ EP F N G+ + +A G+ Sbjct: 57 DVRSKATLHRLFTRYPVEAVVHCAGLKAVGESVREPLRYFDTNVSGSVNLCQAMAEAGVF 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNN 141 ++ S+ V+ R P+DE P P N YG SKL E + S ++ Sbjct: 117 DLLFSSSATVYGDCERMPLDENCPLGLPTNPYGHSKLMAEHVMKSVAHS 165 >gi|237738924|ref|ZP_04569405.1| UDP-glucose 4-epimerase [Fusobacterium sp. 2_1_31] gi|294781832|ref|ZP_06747164.1| UDP-glucose 4-epimerase [Fusobacterium sp. 1_1_41FAA] gi|229424027|gb|EEO39074.1| UDP-glucose 4-epimerase [Fusobacterium sp. 2_1_31] gi|294481643|gb|EFG29412.1| UDP-glucose 4-epimerase [Fusobacterium sp. 1_1_41FAA] Length = 329 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLKVMKAHNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|85858248|ref|YP_460450.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] gi|85721339|gb|ABC76282.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] Length = 331 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Query: 30 GRPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 GR ++ +L + +F P+ +++ AA V+++ EP + N + + A Sbjct: 44 GRLEVGELADTRRLDEVLQAFRPEAVLHFAASIQVEESVREPLRYYRNNVANSLNLLDAM 103 Query: 89 DSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + + IY ST V+ R P+DE P NP+N YG SK+ E Sbjct: 104 ERHDVRNLIYSSTAAVYGIPERMPVDESLPLNPINPYGASKVMME 148 >gi|240170408|ref|ZP_04749067.1| RmlD substrate binding domain-containing protein [Mycobacterium kansasii ATCC 12478] Length = 365 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 17/114 (14%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLSRTP 111 I++P +Y +P +A +N EG + +AA S P +++ S+ V+ SR P Sbjct: 85 IVSPPSYR-------DPRLARKVNVEGTRNLLRAAQSRSDPPLFVFASSAAVYG--SRNP 135 Query: 112 ------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 I +P NP++ YG+ K+ E + Y ILR V S GS L Sbjct: 136 HRQPERITAATPVNPIDQYGQDKVLAEAALTQSGLPYAILRLGGVISPDGSANL 189 >gi|160876223|ref|YP_001555539.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|160861745|gb|ABX50279.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS195] gi|315268412|gb|ADT95265.1| NAD-dependent epimerase/dehydratase [Shewanella baltica OS678] Length = 326 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 9/138 (6%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 C+ +VE+I D K L DVI + AA A+ + P+ NA+ Sbjct: 48 CLDEVEVICGDIRDPHFCK-------HLCKDIDVIYHLAALIAIPYSYIAPDSYLDTNAK 100 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G I +AA + I+ ST V+ PIDE P P + Y SK+A + S+ Sbjct: 101 GTLNICQAALENNVSRVIHTSTSEVYGTAKYVPIDEQHPLQPQSPYSASKMAADAMAMSF 160 Query: 139 TNNYVI-LRTAWVYSIFG 155 N++ + L A ++ +G Sbjct: 161 HNSFELPLTIARPFNTYG 178 >gi|227544138|ref|ZP_03974187.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300909842|ref|ZP_07127303.1| probable dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] gi|62422042|gb|AAX82603.1| putative dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri] gi|227185885|gb|EEI65956.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300893707|gb|EFK87066.1| probable dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] Length = 166 Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 14/116 (12%) Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + K ++ VV DQFG PT +A + N + + D GI+ + +G SW + Sbjct: 49 VVKGHDKLIVVNDQFGRPTWTRTLAEFM-----NYLVDQDQPF-GIYQLPNEGT-CSWYE 101 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 FA I P + + YP KA+RP +S L K +T I WK Sbjct: 102 FATEILKNKGVEVAP------VDSSAYPAKAYRPRHSVLSLKKAKDT-GFEIMDWK 150 >gi|332715748|ref|YP_004443214.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] gi|325062433|gb|ADY66123.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] Length = 356 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 10/125 (8%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DI ++P D F D +I+ AA + + PEI + IN G+ A+AA G Sbjct: 55 DIRDIQPSDMEGF------DAVIHLAALSNDPLSNLNPEITYEINYRGSVRAARAAKQAG 108 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTA 148 + I+ S+ + ++E + P++ YG SK+ E ++AS + + V +R A Sbjct: 109 VKRFIFASSCSNYGAAGEGLVNETAELKPVSAYGTSKVLAEREIASLASPGFSPVYMRPA 168 Query: 149 WVYSI 153 Y + Sbjct: 169 TAYGL 173 >gi|269986679|gb|EEZ92959.1| NAD-dependent epimerase/dehydratase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 321 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--- 108 D IIN AA + VD + + S N G I + GI ISTD V+ LS Sbjct: 74 DAIINFAAESHVDNSIKNSSLFISSNIVGVHNILETVRKTGIRFHQISTDEVYGSLSLNS 133 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +E S NP N Y +K A + V +Y N Y Sbjct: 134 KEKFNENSKYNPRNPYSATKAAADFLVRAYYNTY 167 >gi|269797101|ref|YP_003311001.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] gi|269093730|gb|ACZ23721.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] Length = 306 Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 19/173 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD----------IDLLKPKDFAS 44 M+ V G G I L ++D ++V G + +D+ PK S Sbjct: 1 MRITVTGGAGFIGSHLVDRLIEDGHTVQVIDNLYTGNKEFVHSKAQFVELDIRDPK-LYS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYV 103 F PD I + AA T V + +P + IN G + A + + + S+ V Sbjct: 60 VLEEFRPDYIFHEAAQTEVSTSMRDPMLDCDINLMGLINLLNTAVKLDVKKFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 + L P++E NP + YG +KL E + Y + + + YS +FG Sbjct: 120 YGNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYICYRYSNVFG 172 >gi|159903825|ref|YP_001551169.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9211] gi|159889001|gb|ABX09215.1| Putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9211] Length = 345 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 11/134 (8%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 ++G D+D L+ FL SP V++N AA V + + P + N G I + Sbjct: 69 KIGLEDMDSLR-----ELFLEKSPSVVVNLAAQAGVRYSIENPSAYLNSNLVGFFNILEL 123 Query: 88 ADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI- 144 + IY S+ V+ G P E P N P++ Y +K + E SY++ Y I Sbjct: 124 CRHHSVENLIYASSSSVYGGNRNLPFVETQPVNHPVSFYAATKKSNELMAHSYSHLYKIP 183 Query: 145 ---LRTAWVYSIFG 155 LR VY +G Sbjct: 184 ATGLRFFTVYGPWG 197 >gi|296242301|ref|YP_003649788.1| dTDP-glucose 4,6-dehydratase [Thermosphaera aggregans DSM 11486] gi|296094885|gb|ADG90836.1| dTDP-glucose 4,6-dehydratase [Thermosphaera aggregans DSM 11486] Length = 335 Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 F D I+N AA T VD++ + P N G I + + + + +++STD V+ Sbjct: 72 EFQADAIVNFAAETHVDRSINNPAPFLQTNIYGVFTILEVSRRLDVNRLLHMSTDEVYGD 131 Query: 107 LS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L DE P NP + Y SK +G+ + SY Y Sbjct: 132 LYGVEGEADEKWPLNPSSPYSASKASGDLLIKSYGRTY 169 >gi|257052157|ref|YP_003129990.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690920|gb|ACV11257.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 327 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D + + AA V + ++P +N +G + A GI +++ G+ R+ Sbjct: 81 DYVYHQAAQAGVRPSVEDPRKYDEVNVDGTLNLLDACRDTGIERFVMASSSSVYGIPRSL 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 P +E PT P++ YG SKLA E +Y+ Y + A Y +++G +M Sbjct: 141 PYEETHPTTPVSPYGASKLAAERYAMAYSQVYDLSAVALRYFTVYGPRMRPNM 193 >gi|198422632|ref|XP_002129353.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 325 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 10/105 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYISTDYVFDGLS 108 D +I+ AA EPE+A +N EG + A +P IY ST + + Sbjct: 85 DAVIHLAAIVGYPACSKEPEVARQVNVEGTRNVVNAL----LPHQRVIYASTGSCYGAVD 140 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 T +E +P +P+ +YG++K GE+ V + V LR A V+ + Sbjct: 141 GTCTEE-TPISPITLYGETKAEGEKLVRA--KGGVGLRLATVFGV 182 >gi|328471286|gb|EGF42186.1| UDP-glucose 4-epimerase [Listeria monocytogenes 220] Length = 330 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|269964533|ref|ZP_06178772.1| hypothetical protein VMC_02020 [Vibrio alginolyticus 40B] gi|269830660|gb|EEZ84880.1| hypothetical protein VMC_02020 [Vibrio alginolyticus 40B] Length = 547 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%) Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 A + + IP +++ST VFD P F N + YGK K+ E+ + Sbjct: 67 AAWLGEHCKQRNIPYLFVSTAMVFDATKNGPYGIFEERNTQDDYGKYKVRCEDAIWQANP 126 Query: 141 NYVILRTAWV--YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN 198 + +I R W + G+N L + R +E I+ + + A A +Q Sbjct: 127 DAMIARIGWQLHHQAEGNNMLAHLDRQYEENGVITASTAWYPATSHMDDTALAFLQ---- 182 Query: 199 LIENSDTSLRGIFHMTAD 216 LIE ++ G++H+ ++ Sbjct: 183 LIERNEA---GLYHLDSN 197 >gi|255038347|ref|YP_003088968.1| CDP-glucose 4,6-dehydratase [Dyadobacter fermentans DSM 18053] gi|254951103|gb|ACT95803.1| CDP-glucose 4,6-dehydratase [Dyadobacter fermentans DSM 18053] Length = 359 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVF 104 +SFSPD + + AA V + + P F +NA G + A + PC I+I+TD V+ Sbjct: 80 ISFSPDFVFHLAAQPLVRLSYEIPAETFDVNAVGTANVLDAIRFLDKPCAGIFITTDKVY 139 Query: 105 DGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + P E + Y SK E ++SY N++ Sbjct: 140 ENQEWQYPYRENDRLGGYDPYSASKACAELIISSYRNSF 178 >gi|77463729|ref|YP_353233.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] gi|77388147|gb|ABA79332.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides 2.4.1] Length = 330 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 4/134 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G S ++ + +R G P + D+ P + + +I+ AA Sbjct: 19 CKALARAGHRPVSFDNLSTGHADAVRFG-PLVQGDVRDPNAVEAALRAHGAKAVIHFAAS 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ +P + N G + + + G+ I S+ G R PI E +P Sbjct: 78 AYVGESMADPAKYYDNNVGGMIGLVQGCRAAGVSRIVFSSSCATYGTPDRLPIRETTPQR 137 Query: 120 PLNIYGKSKLAGEE 133 P+N YG++KL GEE Sbjct: 138 PINPYGRTKLIGEE 151 >gi|50120973|ref|YP_050140.1| putative NAD dependent epimerase/dehydratase [Pectobacterium atrosepticum SCRI1043] gi|49611499|emb|CAG74947.1| putative NAD dependent epimerase/dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 342 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 50 SPDVIINPAAYTAVDKAEDEP------EIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 +PD++ N A + ++P + +IN EGA +A A GI IY+S+ Sbjct: 61 TPDILHNVEAVIDLAGLSNDPAAQISSTLTHAINYEGACHLANTAKKAGIQRYIYMSSAS 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 V+ TP DE + P ++Y + KL E ++ T + +ILR A V+ + Sbjct: 121 VYGRSGSTPADEETECQPQSLYAELKLNVERELLRLRDTTFHPIILRNATVFGL 174 >gi|14520521|ref|NP_125996.1| UDP-glucose 4-epimerase [Pyrococcus abyssi GE5] gi|5457737|emb|CAB49227.1| galE-1 UDP-glucose 4-epimerase) [Pyrococcus abyssi GE5] Length = 307 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 4/124 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 S D + + AA +V+++ +P +N G I +A I+ S+ V+ + Sbjct: 66 SADYVFHEAAQISVEESVKDPVFTEEVNVIGTINILRALSEGNGKLIFASSAAVYGEPTS 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLLSMLRL 165 PI E P NP++ YG SK++GE + Y VILR VY S+ ++ + Sbjct: 126 LPIREDHPLNPISPYGVSKVSGEHYCKVFYQLYGVPTVILRYFNVYGPRQSSAYAGVISI 185 Query: 166 AKER 169 ER Sbjct: 186 FMER 189 >gi|317130294|ref|YP_004096576.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315475242|gb|ADU31845.1| NAD-dependent epimerase/dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 316 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + S F +S D+ + A V + D+P F+ + G + + + Sbjct: 57 DIKDEQLLDSLFSKYSFDICYHLGASINVQDSIDDPRTTFNNDTVGTFYVMEQCRKHLVK 116 Query: 95 CIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +++ST V+D L T I E PT P + Y +K+A E V SY Y V++R Sbjct: 117 VVFMSTCMVYDRCLDETGITEQHPTKPASPYAGAKIAAENMVLSYFFAYDLPVVVVRPFN 176 Query: 150 VYSIF 154 Y F Sbjct: 177 TYGPF 181 >gi|55379799|ref|YP_137649.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232524|gb|AAV47943.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 310 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA T + + F+IN +G + AA +G+ ++ S+ V+ + T Sbjct: 72 DRVIHLAAITGASSTHERRDETFAINYDGTENVLTAAGKLGVDHVVFASSCNVYGRATST 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 IDE +P+N Y ++KL E + Y + + TA Sbjct: 132 DIDETVDPDPINPYAETKLQSETLLQEYCEEFDMTGTA 169 >gi|299142062|ref|ZP_07035196.1| NAD dependent epimerase/reductase-related protein [Prevotella oris C735] gi|298576524|gb|EFI48396.1| NAD dependent epimerase/reductase-related protein [Prevotella oris C735] Length = 332 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 14/156 (8%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R+ +++L K+ D +++ A T +D F +N +G + +A Sbjct: 45 RINFIELNLSSQKELEKQLAGHEFDYVVHAAGATKCLHTDD----FFKVNTDGTRHLVQA 100 Query: 88 ADSIGIPC---IYISTDYVFDGLS-RTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTN 140 ++ +P +Y+S+ VF + + P E S + P YGKSKL E+ + S N Sbjct: 101 LLALKMPIRRFVYLSSLSVFGAIKEQQPYQEISEHDHPRPNTAYGKSKLMAEQYLDSIGN 160 Query: 141 N--YVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + Y+ILR VY ++ L M + K + SV Sbjct: 161 DFPYIILRPTGVYGPREKDYFL-MAKSIKGHTDFSV 195 >gi|298491815|ref|YP_003721992.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708] gi|298233733|gb|ADI64869.1| NAD-dependent epimerase/dehydratase ['Nostoc azollae' 0708] Length = 347 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 54/245 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVG-------------RPDIDLLKP 39 MK LV G G + L S+ + D +VG DI + P Sbjct: 1 MKILVTGTEGYLGSLLPSLLIAKGHEVSGLDTGFYKVGWLYNGTNITAKTLNKDIRNIIP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D D I++ A + + P I + IN G+ +A A +G+ +Y+ Sbjct: 61 EDLEGV------DAIVHMAELSNDPAGQLAPHITYEINHLGSVHLANLAKRMGVRRFLYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG 155 S+ V+ S + E SP NP Y + K E + ++ +R A + FG Sbjct: 115 SSCSVYGVASEGDVTEESPVNPQTAYAECKTLVERDIKPLADDDFSPTFMRNA---TAFG 171 Query: 156 SN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAH 197 ++ L ++ LA +EI + D GTP AL I +AII I H Sbjct: 172 ASPRMRFDIVLNNLSGLAWTTKEIKMTSD--GTPWRPLVHALDICQAIICALEAPRDIVH 229 Query: 198 NLIEN 202 N + N Sbjct: 230 NQVFN 234 >gi|291230305|ref|XP_002735108.1| PREDICTED: TDP-glucose 4,6-dehydratase-like [Saccoglossus kowalevskii] Length = 353 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 22/168 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQD------VEIIR---------VGRPDIDLLKPK--DFASFF 46 LV G G + +L M ++D +I R G P++ ++K D A Sbjct: 47 LVTGGAGYLGSTLVPMLLRDGYKVTVYDIFRWGINSLLPLAGDPNLHIIKGDVCDEAHLV 106 Query: 47 -LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + + DVII+ AA + EP+ A +IN I K S IY ST + Sbjct: 107 KVMENVDVIIHLAAVVGYPACDKEPDKACAINVGATETITKNLQSYQ-KLIYASTGSCY- 164 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 G E +P PL +YG +K GEE V + V LR A V+ + Sbjct: 165 GAVDGICSEDTPICPLTLYGSTKAKGEELVCNVGG--VGLRLATVFGV 210 >gi|148508229|gb|ABQ76016.1| GalE2 [uncultured haloarchaeon] Length = 328 Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRTPI 112 + + AA V ++ +P IN EG I AA D+ + S+ V+ P Sbjct: 83 VYHQAAQAGVRQSVSDPRKYDEINVEGTLNILDAARDTETERVVLASSSSVYGRPEYLPY 142 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 DE PT P++ YG SKLA E +Y+ Y + A Y +++G +M Sbjct: 143 DESHPTTPVSPYGASKLAAERYACAYSEVYDLPAVALRYFTVYGPRMRPNM 193 >gi|229584492|ref|YP_002842993.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] gi|228019541|gb|ACP54948.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.16.27] Length = 316 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +V+IN AA + VD++ +P+ + N G + +AA ++ISTD V+ Sbjct: 69 EVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRFNFNYVHISTDEVY---GEEC 125 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V SY Y Sbjct: 126 GDEDSPLNPSSPYSASKASADLFVKSYVRTY 156 >gi|291296150|ref|YP_003507548.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279] gi|290471109|gb|ADD28528.1| NAD-dependent epimerase/dehydratase [Meiothermus ruber DSM 1279] Length = 319 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 19/159 (11%) Query: 2 KCLVIGNNGQIAQSL----------SSMCVQDVEIIRVGRP-------DIDLLKPKDFAS 44 + LV G GQ+ L + D+ G P +D Sbjct: 3 RVLVTGALGQVGSELIPALRGLYGSEEVLATDIRRAPPGHPALEGPYEQLDCTNGPALLE 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 FF+ V+ + AA + +AE EP++A+ +N EG + +AA +G S+ F Sbjct: 63 FFVRHRVGVVYHLAAILSA-RAEAEPQLAWQVNIEGLHNVLEAARQVGAQVFVPSSIAAF 121 Query: 105 D-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 R P + + P +YG +K+AGE Y + + Sbjct: 122 GPSTPRDPTPQDTLQRPNTLYGVTKVAGELLCDYYAHRF 160 >gi|85858957|ref|YP_461159.1| L-threonine 3-dehydrogenase [Syntrophus aciditrophicus SB] gi|85722048|gb|ABC76991.1| L-threonine 3-dehydrogenase [Syntrophus aciditrophicus SB] Length = 347 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 23/163 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG---RPDIDLLKPKDFASFFL-------- 47 + LV G GQI L+ Q + +++ G RPD +LL+ + SF + Sbjct: 24 RILVTGATGQIGSELALALRQAYGEAKVVAAGHRRRPDAELLESGPYCSFDVRDGETLQR 83 Query: 48 ---SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + D I + A+ + AE P+ A+ IN +G + + A G + S+ F Sbjct: 84 IVQEYRIDTIFHLASLLSA-AAEKNPQSAWEINMKGLTNVLETARISGCAVFFPSSIGAF 142 Query: 105 DG---LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 L TP + + P +YG +KLAGE Y +++ + Sbjct: 143 GPGTPLENTP--QLTIQRPATLYGITKLAGELLCDYYFHHFGV 183 >gi|33862359|ref|NP_893919.1| UDP-glucose-4-epimerase [Prochlorococcus marinus str. MIT 9313] gi|33640472|emb|CAE20261.1| Possible UDP-glucose-4-epimerase [Prochlorococcus marinus str. MIT 9313] Length = 308 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 19/161 (11%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-------- 51 MK +V+G +G I L ++ Q ++ + R L+ PK L P Sbjct: 1 MKAVVVGASGFIGSHLVDALLAQGSQVRALSRHLPGLITPKAQDHPGLVLHPLDMADRLG 60 Query: 52 --------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 ++I + A+ + + P +IN GA + +A+ +GI +++S+ Sbjct: 61 LEKALVGSEIIFHLASGSLPQSSNRNPREDININVLGALNLLEASLEVGIQKFVFVSSGG 120 Query: 103 VFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + PI E PT+P+ YG +KLA E+ V+ Y + Y Sbjct: 121 TVYGIPKQVPIAENHPTDPICSYGITKLAIEKYVSLYRHLY 161 >gi|153854430|ref|ZP_01995708.1| hypothetical protein DORLON_01703 [Dorea longicatena DSM 13814] gi|149752956|gb|EDM62887.1| hypothetical protein DORLON_01703 [Dorea longicatena DSM 13814] Length = 342 Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 68 KLFEEEKPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK A + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 >gi|257898211|ref|ZP_05677864.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] gi|257836123|gb|EEV61197.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] Length = 329 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +PT+P N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITENTPTDPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTP 215 >gi|239917106|ref|YP_002956664.1| UDP-galactose 4-epimerase [Micrococcus luteus NCTC 2665] gi|281414431|ref|ZP_06246173.1| UDP-glucose 4-epimerase [Micrococcus luteus NCTC 2665] gi|239838313|gb|ACS30110.1| UDP-galactose 4-epimerase [Micrococcus luteus NCTC 2665] Length = 333 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 10/159 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M C+V+ + ++ + DV +R D+ + A+F S + +++ A + Sbjct: 38 MDCVVVDD---LSTGHAEFVPSDVPFLRG-----DICETAALAAFMRSHNVGGVVHVAGF 89 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTN 119 + + P I + N +G ++ +A +++G + S+ G TP + E + T+ Sbjct: 90 KFAGVSVERPLITYRANVQGVVSVLEAMEAVGARLMVFSSSAATYGSPTTPLVTEDTETH 149 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSN 157 P + YG+SKL GE +A + T+ Y ++ GS Sbjct: 150 PESPYGESKLIGEWLMADQARATGLRHTSLRYFNVVGSG 188 >gi|262067188|ref|ZP_06026800.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] gi|291379091|gb|EFE86609.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] Length = 329 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLKVMKAHNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAESMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAHPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|262066210|ref|ZP_06025822.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium periodonticum ATCC 33693] gi|291380066|gb|EFE87584.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium periodonticum ATCC 33693] Length = 327 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 41/249 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + + G N +I ++L S ++VE + ++D L + S +I+ AA + Sbjct: 26 QVVAFGRNEKIGKTLIS---ENVEFFKGDIDNLDDL-------YKASQDCSAVIHAAALS 75 Query: 62 AV-DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSP 117 V + ED +++N G I + + + +++S+ ++ G DE Sbjct: 76 TVWGRWED----FYNVNVIGTKNIVQVCEEKKLKLVFVSSPSIYAGAKDQLDVKEDEAPK 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--------- 168 N LN Y KSK+ E + S NY+I+R ++ + ++ + +L L K+ Sbjct: 132 ENDLNYYIKSKIMAENIIKSSNLNYMIIRPRGLFGVGDTSIIPRLLDLNKKMGIPLFVDG 191 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 ++++ + C + +L++A +EN + S R I+++T +G P+ + + Sbjct: 192 KQKVDITCVE--NVAYSLRLA----------LENKEHS-REIYNIT-NGEPIEFKEILTL 237 Query: 229 IFWESAERG 237 F E G Sbjct: 238 FFNEMGTEG 246 >gi|255021511|ref|ZP_05293555.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC 51756] gi|254969039|gb|EET26557.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus caldus ATCC 51756] Length = 336 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + D F DV++N AA V + + P N G + + G+ Sbjct: 63 LDIAQRDDLHRLFTGSRFDVVVNLAAQAGVRYSLEHPHSYADSNLLGFVNLLEGCRHQGV 122 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 ++ S+ V+ SR P E P + P+++Y +K AGE SY + Y I LR Sbjct: 123 DHLLFASSSSVYGANSRLPYSEHDPVDHPVSLYAATKRAGELMAHSYAHLYDIPVTGLRF 182 Query: 148 AWVYSIFG 155 VY +G Sbjct: 183 FTVYGPWG 190 >gi|91228023|ref|ZP_01262108.1| dTDP-4-dehydrorhamnose reductase [Vibrio alginolyticus 12G01] gi|91188252|gb|EAS74551.1| dTDP-4-dehydrorhamnose reductase [Vibrio alginolyticus 12G01] Length = 547 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 9/140 (6%) Query: 79 EGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 E A + + IP +++ST VFD P F N + YGK K+ E+ + Sbjct: 65 EWAAWLGEQCKRHNIPYLFVSTAMVFDATKNGPYGIFEERNTQDDYGKYKVRCEDAIWQA 124 Query: 139 TNNYVILRTAWV--YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 + ++ R W + G+N L + R +E I+ + + A A +Q Sbjct: 125 NPDAMVARIGWQLHHQAEGNNMLAHLDRQYEEYGVITASTAWYPATSHMDDTALAFLQ-- 182 Query: 197 HNLIENSDTSLRGIFHMTAD 216 LIE ++ G++H+ ++ Sbjct: 183 --LIERNEA---GLYHLDSN 197 >gi|70732422|ref|YP_262184.1| hypothetical protein PFL_5105 [Pseudomonas fluorescens Pf-5] gi|68346721|gb|AAY94327.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 285 Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 14/197 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L A+ PDV+IN ++P A INA +A+ Sbjct: 53 VDVLDQDALATVLAKVRPDVVINCVGLIKQLADANDPLTALPINAMLPHRLARLCALAHA 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++STD VF G ++ E ++ ++YGKSK GE + + LRT+ + Sbjct: 113 RLIHVSTDCVFSG-NKGGYLESDISDAEDLYGKSKYIGELHDEPHA---ITLRTSIIGHE 168 Query: 154 FGSNFLLSMLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 GS+ L L+++ F G PT L + H LRG++H Sbjct: 169 LGSSNALVDWFLSQQGCVKGFSKAIFSGLPTVELARVMKDYVLPH-------PQLRGLYH 221 Query: 213 MTADGGPVSWADFAEYI 229 + A PV+ D + Sbjct: 222 VAA--APVNKLDLLRMV 236 >gi|314937479|ref|ZP_07844812.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|314942138|ref|ZP_07848992.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|314947522|ref|ZP_07850937.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] gi|314951509|ref|ZP_07854558.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|314992599|ref|ZP_07858017.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|314995466|ref|ZP_07860566.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313590300|gb|EFR69145.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313592891|gb|EFR71736.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|313596349|gb|EFR75194.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|313599061|gb|EFR77906.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|313643120|gb|EFS07700.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|313646072|gb|EFS10652.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] Length = 377 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 108 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 109 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 168 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + +PI E +P NP N YG+SKL E+ + +Y YV LR Sbjct: 169 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALR 215 >gi|307299314|ref|ZP_07579115.1| NAD-dependent epimerase/dehydratase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915110|gb|EFN45496.1| NAD-dependent epimerase/dehydratase [Thermotogales bacterium mesG1.Ag.4.2] Length = 314 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F+ P V+ + AA +V ++ EPE +N G+ + K A G+ Sbjct: 53 DITDQEMMERVFMLHRPTVLFHLAAQISVSRSVREPEEDAMVNIIGSLRLLKIAAKYGLK 112 Query: 95 -CIYISTDYVF--DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRT 147 I+ ST D + R P DE PL+ YG +K A E + +++ Y +LR Sbjct: 113 KVIFSSTGGAIYGDDVKRIPTDEEELPKPLSPYGIAKYATENYLRFFSSELGIKYTVLRY 172 Query: 148 AWVY 151 A VY Sbjct: 173 ANVY 176 >gi|299140198|ref|ZP_07033365.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298597836|gb|EFI54007.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 351 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 5/103 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 A F + + + AA A D +D + +S N +G +A+AA + G+ I+IST Sbjct: 59 LARTFAEHKFEAVFHCAAMLAHDVQDDN--LLWSSNVDGTRLVAEAALAAGVTRFIFIST 116 Query: 101 DYVF-DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ++ +GL+R ++ P P+ +YG SKLA E+++ S + + Sbjct: 117 NCLWGEGLAREVTEQEVPA-PVELYGHSKLAAEKQLDSLRSEH 158 >gi|251780451|ref|ZP_04823371.1| NAD dependent epimerase/dehydratase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084766|gb|EES50656.1| NAD dependent epimerase/dehydratase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 334 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 74 FSINAE--GAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 F N E G G I ++++ PC +++ST V+D IDE P P++ YG SK+ Sbjct: 112 FGKNGEMDGDGWIVDSSEN-NHPCKVVFMSTCMVYDVADDKGIDENHPAKPISPYGGSKI 170 Query: 130 AGEEKVASYTNNY----VILRTAWVYSIF 154 A E V SY N Y V++R Y F Sbjct: 171 AAENMVLSYYNAYKLPTVVIRPFNTYGPF 199 >gi|241765551|ref|ZP_04763511.1| UDP-glucose 4-epimerase [Acidovorax delafieldii 2AN] gi|241364640|gb|EER59678.1| UDP-glucose 4-epimerase [Acidovorax delafieldii 2AN] Length = 329 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ A+Y V ++ +P + N + A G+ ++ ST VF + Sbjct: 68 DAVMHFASYIQVGESVTDPAKYYLNNVANTIGLLNAMRDHGVARFVFSSTAAVFGEPQYS 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P+N YG++K E+ +A Y Y Sbjct: 128 PIDERHPRQPINPYGRTKWMVEQALADYDRAY 159 >gi|257060584|ref|YP_003138472.1| CDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8802] gi|256590750|gb|ACV01637.1| CDP-glucose 4,6-dehydratase [Cyanothece sp. PCC 8802] Length = 386 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFD 105 + PD+I + AA V ++ E ++IN G + +A S+ PC I+I+TD +D Sbjct: 81 QWQPDIIFHLAAQPLVRRSYLESVETWNINVMGTVYVLEALKSLTTPCASIFITTDKCYD 140 Query: 106 GLSRTPIDEFSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 +R + + +PL + Y SK E +AS+ N++ Sbjct: 141 --NREWLYGYRENDPLGGYDPYSSSKAGAELAIASWRNSF 178 >gi|33594891|ref|NP_882534.1| dTDP-glucose 4,6-dehydratase [Bordetella parapertussis 12822] gi|33599166|ref|NP_886726.1| dTDP-glucose 4,6-dehydratase [Bordetella bronchiseptica RB50] gi|33564967|emb|CAE39914.1| dTDP-glucose 4,6-dehydratase [Bordetella parapertussis] gi|33575212|emb|CAE30675.1| dTDP-glucose 4,6-dehydratase [Bordetella bronchiseptica RB50] Length = 353 Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS----------IGIPCIYIST 100 P I+N AA + VD+A P+ N G A+ +AA + +++ST Sbjct: 74 PRAIVNFAAESHVDRAIRAPDAFVQTNVVGTFALLEAARAYCAEQDDAAAAAFRFLHVST 133 Query: 101 DYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D V+ L+ P E P P N Y SK A + V SY + Y Sbjct: 134 DEVYGSLAPQAAPFTETHPYQPNNPYSASKAASDHMVRSYRHTY 177 >gi|325522000|gb|EGD00687.1| UDP-glucose 4-epimerase [Burkholderia sp. TJI49] Length = 329 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ AA V ++ P+ +++N G + A G+ I +S+ G+ Sbjct: 66 PDVVIHFAALAYVGESVLVPDRYYTVNVTGTCTLLNAMREAGVGRIVMSSSCATYGIPDA 125 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E +P P+N YG +K A E A + Y Sbjct: 126 LPISERTPQQPINPYGFTKYAMERMAADFERAY 158 >gi|159491675|ref|XP_001703785.1| predicted protein [Chlamydomonas reinhardtii] gi|158270466|gb|EDO96311.1| predicted protein [Chlamydomonas reinhardtii] Length = 333 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 10/127 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADS 90 +DL + F ++N AA + E P+ A ++N + + A+ Sbjct: 53 VDLSTGEGLTQAFEQTPFHAVVNCAAISQPALCETAPDTARAVNVPTHLVDCLLRQEAER 112 Query: 91 IGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VI 144 G+ I+ISTD VFDG SR E N +N+YGKSK E+ + T + I Sbjct: 113 GGLRALLIHISTDQVFDG-SRAHWKEDEAGNQVNVYGKSKYEAEQHILVRTWGHPYPVAI 171 Query: 145 LRTAWVY 151 LR++ +Y Sbjct: 172 LRSSIIY 178 >gi|19705152|ref|NP_602647.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713089|gb|AAL93946.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 328 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 36/207 (17%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 +++N G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 86 YNVNVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 145 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L K+ ++++ + C + Sbjct: 146 AENIIKSSKLNYMIIRPRGLFGVGDTSIIPRLLELNKKIGIPLFVDGKQKVDITCVE--N 203 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG---- 237 AL++A +EN+ S R I+++T D P+ + + F E G Sbjct: 204 VAYALRLA----------LENNQYS-RKIYNITND-EPIEFKEILTLFFNEMGTEGKYLK 251 Query: 238 ------GPYSKVYRIFTKQYPTKAHRP 258 P IF K + K P Sbjct: 252 WNYNLISPLVSFLEIFYKLFRIKKEPP 278 >gi|284049269|ref|YP_003399608.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] gi|283953490|gb|ADB48293.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] Length = 329 Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 V++I D + LK + D +++ AA + V ++ P + N G Sbjct: 45 VQLIEGDIHDFNFLK-----HILGEYEIDGVLHFAASSQVGESMVNPGKYYYNNVAGTLG 99 Query: 84 IAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + A G+ ++ ST V+ R PI E P P N+YG++KL E+ + Y++ Y Sbjct: 100 LLDAMREAGVEQLVFSSTAAVYGEPDRVPITEDMPLQPTNVYGRTKLMIEKMMEDYSHAY 159 Query: 143 VILRTAWVY 151 + A Y Sbjct: 160 GLRYVALRY 168 >gi|238567033|ref|XP_002386157.1| hypothetical protein MPER_15717 [Moniliophthora perniciosa FA553] gi|215437289|gb|EEB87087.1| hypothetical protein MPER_15717 [Moniliophthora perniciosa FA553] Length = 68 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 33/59 (55%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S F F P+ II+ AA D AE +PE +NAE +A A ++G +YISTD+ Sbjct: 5 SKFKEFKPNWIIHCAAERRPDVAEKDPEATRRLNAEVPAHLASLAKTLGSWIVYISTDF 63 >gi|322418957|ref|YP_004198180.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] gi|320125344|gb|ADW12904.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] Length = 327 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N EG + +A + +Y S+ V+ P+ E P N N YG Sbjct: 96 KDYPRTAFHVNIEGTFNVLEACVRNNVRRLVYSSSASVYGDAVEVPMTEEHPFNNRNFYG 155 Query: 126 KSKLAGEEKVASYTN----NYVILRTAWVYS 152 +K+AGE +Y + +YV LR VY Sbjct: 156 ATKIAGEAMCRAYHDRYGLDYVGLRYMNVYG 186 >gi|255305246|ref|ZP_05349418.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile ATCC 43255] Length = 525 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 11/104 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ + P++ N G + A+ G+ + ISTD V+ L Sbjct: 275 DIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDL--- 331 Query: 111 PID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 PID E S NP + Y SK + + V+SY Y +L T Sbjct: 332 PIDRKDLFFTEQSSINPSSPYSASKASADLLVSSYYRTYGLLTT 375 >gi|189218496|ref|YP_001939137.1| nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] gi|189185354|gb|ACD82539.1| Nucleoside-diphosphate-sugar epimerase [Methylacidiphilum infernorum V4] Length = 348 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DLL K + F F PD +I+ AA V + +P N G I + GI Sbjct: 67 VDLLDKKAVEALFFDFEPDCVIHYAAQAGVRYSLVDPYAYAQSNVSGVVPILECCRKKGI 126 Query: 94 PCIYISTDYVFDGLSR-TPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 +++ G++R P P + PL+IY +K A E SY++ + I LR Sbjct: 127 GHFLLASSSSVYGMNRLIPFKVNHPADHPLSIYAATKKAAELIAHSYSHLFAIPVSCLRF 186 Query: 148 AWVYSIFG 155 VY +G Sbjct: 187 FTVYGPWG 194 >gi|115345655|ref|YP_771836.1| dTDP-glucose 4,6-dehydratase [Roseobacter denitrificans OCh 114] gi|115292976|gb|ABI93428.1| dTDP-glucose 4,6-dehydratase [Roseobacter denitrificans OCh 114] Length = 358 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 9/106 (8%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIY 97 F S PD +++ AA + VD++ D P N G + +AA S G + Sbjct: 68 FASHKPDAVMHLAAESHVDRSIDGPGDFIETNITGTYHLLEAARSFWTAQGKPEGFRFHH 127 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD VF L T E +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVFGSLGATGQFTETTPYDPRSPYSASKAASDHLVRAWAETY 173 >gi|77165632|ref|YP_344157.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC 19707] gi|254434382|ref|ZP_05047890.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus oceani AFC27] gi|76883946|gb|ABA58627.1| NAD-dependent epimerase/dehydratase [Nitrosococcus oceani ATCC 19707] gi|207090715|gb|EDZ67986.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Nitrosococcus oceani AFC27] Length = 349 Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 22/185 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID---------LLK--PKDFASFF--- 46 MK LV G G I + L + + E IR+ +++ LL+ DFA+ Sbjct: 1 MKVLVTGATGFIGRHLVAALLSRKETIRILARNVEQAEAIWSPGLLEVVRGDFANALTLG 60 Query: 47 -LSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 L D++ + A+ + DK + + + EG + + A G+ I++S+ Sbjct: 61 DLCEGVDIVFHLASGSFAENDKTGEAEWLHQKVAVEGTKELLRRAARAGVKRFIFVSSVK 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSNF 158 + +DE SP P + YG+ KLA E V Y + LR VY G Sbjct: 121 AMGEGGSSHLDEASPELPQSAYGRGKLAAERAVLEAGRTYGMHVCNLRLPMVYGSDGKGN 180 Query: 159 LLSML 163 L M+ Sbjct: 181 LPRMM 185 >gi|253574439|ref|ZP_04851780.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846144|gb|EES74151.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 329 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F PD +I+ AA T+V ++ P N G + + G+ ++ S+ V+ Sbjct: 61 FAEERPDAVIHLAAQTSVRRSLQNPTADAETNILGTIQLLEQCIRFGVRRIVFASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 PI E PL+ YG SK E + S++ Y ILR A VY + Sbjct: 121 GNPDHLPIKESQRPEPLSFYGVSKRVSEMYIQSFSERYGLEYSILRYANVYGV 173 >gi|192288553|ref|YP_001989158.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris TIE-1] gi|192282302|gb|ACE98682.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris TIE-1] Length = 353 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 13 AQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 A +L S+ V D R R DI ++ F FSPDV+++ AA + VD++ D P Sbjct: 39 AGNLDSLAPVSDDPRFRFVRADI--VEQGTMRLLFEEFSPDVVMHLAAESHVDRSIDGPG 96 Query: 72 IAFSINAEGAGAIAK----------AADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNP 120 N G ++ + AA G +ISTD VF L + E +P P Sbjct: 97 DFIQTNIVGTYSLLQAALAHWRSLPAARKSGFRFHHISTDEVFGSLGAEGLFREDTPYQP 156 Query: 121 LNIYGKSKLAGEEKVASYTNNY 142 + Y SK + V ++ + Y Sbjct: 157 KSPYSASKAGSDHLVRAWHHTY 178 >gi|121727021|ref|ZP_01680212.1| UDP-N-acetylglucosamine 2-epimerase [Vibrio cholerae V52] gi|20502740|gb|AAM22596.1|AF390573_9 dTDP-4-dehydrorhamnose reductase [Vibrio cholerae O37] gi|121630532|gb|EAX62922.1| UDP-N-acetylglucosamine 2-epimerase [Vibrio cholerae V52] Length = 290 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 38/239 (15%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQD-VEIIRVGRP-----------------DIDLLKPKD 41 MK L++G G + SL +++ D E+ R DID+ D Sbjct: 1 MKILIVGTTGMLGYSLFTNLSEHDGYEVFGTVRNILGKEKFFEEYLDNLIFDIDV---ND 57 Query: 42 FASFFL---SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 F+ + PDV+IN + A IN+ IA+ D I I+ Sbjct: 58 FSRLKFAIETIKPDVVINCIGLIKQHDISKQHINAIEINSLLPHKIAQVCDGISAKLIHF 117 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 STD VF G + I+ P + +IYGKSK GE ++ LRT+ + ++ Sbjct: 118 STDCVFSGKTGKYIEADIP-DATDIYGKSKCLGEVNYGK----HLTLRTSIIGHELNTSV 172 Query: 159 LLSMLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L L + + F G PT IA +I+ ++ N L G+FH++ D Sbjct: 173 SLIDWFLTQNNKVNGFSKAVFSGLPTC--YIANILIKY---ILPNK--QLNGLFHLSVD 224 >gi|163847195|ref|YP_001635239.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525035|ref|YP_002569506.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668484|gb|ABY34850.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222448914|gb|ACM53180.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 337 Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%) Query: 2 KCLVIGN--NGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+ N NG+ A +L+ + DVE++ ++D+ + + A I+ A Sbjct: 29 RVVVVDNLVNGKRA-NLAHLADADVELV-----EVDIRQREVIARLVQGVE---IVYHLA 79 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPT 118 V + +P +NA G + A +P +Y+S+ V+ P+ E PT Sbjct: 80 CLGVRHSLHDPFENHDVNATGTLILLDLARRADVPRFVYVSSSEVYGTARWVPMTEEHPT 139 Query: 119 NPLNIYGKSKLAGEEKVASYTNNY 142 P+ +YG KLAGE ++ +Y Sbjct: 140 YPMTVYGGGKLAGECYTRAFWESY 163 >gi|258404445|ref|YP_003197187.1| dTDP-glucose 4,6-dehydratase [Desulfohalobium retbaense DSM 5692] gi|257796672|gb|ACV67609.1| dTDP-glucose 4,6-dehydratase [Desulfohalobium retbaense DSM 5692] Length = 339 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P+ ++ + ++N AA + VD++ D+P + N +G + +A+ G+ Sbjct: 62 DIADPEAMQRILETYDIEAVVNFAAESHVDRSIDDPAPFVTTNVQGTQVLLEASRRHGLK 121 Query: 95 -CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L E +P P + Y SK A + V +Y Y Sbjct: 122 RFVHVSTDEVYGSLGPEGKFTEDTPLAPNSPYSASKAAADLLVRAYVMTY 171 >gi|148259523|ref|YP_001233650.1| NAD-dependent epimerase/dehydratase [Acidiphilium cryptum JF-5] gi|146401204|gb|ABQ29731.1| NAD-dependent epimerase/dehydratase [Acidiphilium cryptum JF-5] Length = 298 Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIG 92 D+ P + PD ++ A A+ +A + P AF++N +G +A+A A + G Sbjct: 39 DITDPAATETSVRDVRPDACVHLAGIAAIPEAREHPRRAFAVNLDGTLNLARALLAHAPG 98 Query: 93 IPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 I+ + + R+ +DE +P PLN Y SK A + Sbjct: 99 CQLIHAGSADCYGASFRSGQALDESAPLAPLNTYAASKAAAD 140 >gi|282856404|ref|ZP_06265683.1| dTDP-glucose 4,6-dehydratase [Pyramidobacter piscolens W5455] gi|282585775|gb|EFB91064.1| dTDP-glucose 4,6-dehydratase [Pyramidobacter piscolens W5455] Length = 336 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 + F + PDVI+N AA + VD++ +P + N G G + A GI + +STD Sbjct: 68 ALFERYRPDVIVNFAAESHVDRSILDPGLFLRTNVLGTGVLMDACRKYGIARFHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ PL+ Y SK + + V +Y + Sbjct: 128 VYGDL---PLDRPDLFFTERTPLHASSPYSASKASSDLLVLAYCRTF 171 >gi|221639597|ref|YP_002525859.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] gi|221160378|gb|ACM01358.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides KD131] Length = 330 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 4/134 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G S ++ + +R G P + D+ P + + +I+ AA Sbjct: 19 CKALARAGHRPVSFDNLSTGHADAVRFG-PLVQGDVRDPHAVEAALRAHGATAVIHFAAS 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ +P + N G + + + G+ I S+ G R PI E +P Sbjct: 78 AYVGESMADPAKYYDNNVGGMIGLVQGCRAAGVSRIVFSSSCATYGTPDRLPIRETTPQR 137 Query: 120 PLNIYGKSKLAGEE 133 P+N YG++KL GEE Sbjct: 138 PINPYGRTKLIGEE 151 >gi|307595124|ref|YP_003901441.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307550325|gb|ADN50390.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 324 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 29/203 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ L+ G G I L+ V+ DV +I + D++ LK F+ + N Sbjct: 2 MRVLITGGAGFIGSFLTEKLVERGFDVIVIDNLSSGDLNRLKEVIDRVKFVRDDLKSLGN 61 Query: 57 PAAYTAVDK------------AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 P + VD + EP+I F N + + + G+ +Y S+ V Sbjct: 62 PGVFQGVDTVFHLAANPEVRISVTEPKIHFDENVLATFNVLELSRKYGVKTVVYASSSTV 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFL 159 + P E P P+++YG +K AGE +Y Y V LR A +I G Sbjct: 122 YGDAKTIPTPEDHPIQPISVYGAAKAAGEIMCGTYARLYGINCVTLRYA---NIVGPRLR 178 Query: 160 LS-----MLRLAKERREISVVCD 177 +++L + E+ V+ D Sbjct: 179 HGVIYDLLMKLKRNPSELEVLGD 201 >gi|255523726|ref|ZP_05390692.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] gi|296186730|ref|ZP_06855132.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] gi|255512595|gb|EET88869.1| NAD-dependent epimerase/dehydratase [Clostridium carboxidivorans P7] gi|296048767|gb|EFG88199.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] Length = 335 Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D + IDE P P++ YG SK+A E V SY N Y V++R Sbjct: 134 PCKVVFMSTCMVYDVAAEAGIDEKHPVKPVSPYGGSKIAAENMVLSYYNAYKLPTVVIRP 193 Query: 148 AWVYSIF 154 Y F Sbjct: 194 FNTYGPF 200 >gi|317055131|ref|YP_004103598.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] gi|315447400|gb|ADU20964.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 7] Length = 342 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+++N AA + VD++ + PEI N G + A GI Sbjct: 58 IDICDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + V +Y Y Sbjct: 118 QRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYHRTY 171 >gi|294784373|ref|ZP_06749664.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_27] gi|294487945|gb|EFG35300.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_27] Length = 329 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|259417238|ref|ZP_05741157.1| UDP-glucose 4-epimerase [Silicibacter sp. TrichCH4B] gi|259346144|gb|EEW57958.1| UDP-glucose 4-epimerase [Silicibacter sp. TrichCH4B] Length = 327 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F + P +++ AA + V +A EP ++ N G+ + +AA + G + Sbjct: 51 DLTDRTRLDEVFARYQPVAVMHFAALSQVGEAMSEPGRYWANNVGGSLCLIEAAVAAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + +DE +P PLN YG SK A E+ Sbjct: 111 DFVFSSTCATYGEHDNVVLDENTPQQPLNAYGASKRAVED 150 >gi|256846664|ref|ZP_05552120.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_36A2] gi|256717884|gb|EEU31441.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_36A2] Length = 329 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVNK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|92118499|ref|YP_578228.1| UDP-glucose 4-epimerase [Nitrobacter hamburgensis X14] gi|91801393|gb|ABE63768.1| UDP-galactose 4-epimerase [Nitrobacter hamburgensis X14] Length = 349 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 44/263 (16%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P+ + F S+ +++ AA ++V ++ +P+ ++ N G A+ A G Sbjct: 54 DVRDPRQLQAVFQSYDFSAVMHFAASSSVGESVTDPQKYYANNVGGTLALLSAMRGAGSG 113 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-S 152 ++ ST V+ E +P P+N YGKSKL EE ++ Y Y + + Y + Sbjct: 114 RLVFSSTGAVYGNAG----SESAPRFPVNPYGKSKLMIEEILSDYRQAYDLNSVCFRYFN 169 Query: 153 IFGSN---------------FLLSMLRLAKERREISVVCDQFGTPTSA--------LQIA 189 G++ +M+ L E + + D + TP + Sbjct: 170 ASGADACGAIGECRDPETHLIPRAMMALQGEIPDFGIFGDDYDTPDGTAVRDYIHVTDLV 229 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 A +Q + L+ +RG++++ G S ++ IF E+ SK+ R++ Sbjct: 230 SAHVQAVNMLM----GGMRGVYNLGTGVG-YSVSEVLSAIFAEAG------SKMPRVY-- 276 Query: 250 QYPTKAHRPAYSCLDCSKLANTH 272 YP + P+ D S +A H Sbjct: 277 -YPRRPGDPSVLIAD-SSVARMH 297 >gi|126462558|ref|YP_001043672.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] gi|126104222|gb|ABN76900.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17029] Length = 330 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 4/134 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G S ++ + +R G P + D+ P + + +I+ AA Sbjct: 19 CKALARAGHRPVSFDNLSTGHADAVRFG-PLVQGDVRDPHAVEAALRAHGATAVIHFAAS 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ +P + N G + + + G+ I S+ G R PI E +P Sbjct: 78 AYVGESMADPAKYYDNNVGGMIGLVQGCRAAGVSRIVFSSSCATYGTPDRLPIRETTPQR 137 Query: 120 PLNIYGKSKLAGEE 133 P+N YG++KL GEE Sbjct: 138 PINPYGRTKLIGEE 151 >gi|302873798|ref|YP_003842431.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307689961|ref|ZP_07632407.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302576655|gb|ADL50667.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 317 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 21/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEII---RVGRPDIDLLKPK---------DFASFFL 47 MK L+ G G IA ++ V+ D +++ + ++ + PK ++ + L Sbjct: 1 MKILITGGAGFIASHIADRLVELDYDVVIFDNLSSGKVENINPKCKFYKGDITNYEAMKL 60 Query: 48 SFS---PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F P+V+I+ AA V + P IN G + + + IY S+ V Sbjct: 61 VFDIERPEVVIHHAAQIDVQTSLKNPAFDAQINIIGTINVLECCRETKVRKIIYPSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 + P+DE P P++ YG SK + +Y+ Y I R A VY Sbjct: 121 YGNPKYLPVDENHPVEPISFYGISKHTPCHYIKAYSELYNIKYTIFRYANVY 172 >gi|163859121|ref|YP_001633419.1| dTDP-glucose 4,6-dehydratase [Bordetella petrii DSM 12804] gi|163262849|emb|CAP45152.1| dTDP-glucose 4,6-dehydratase [Bordetella petrii] Length = 353 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGIPC--- 95 A+ + P ++N AA + VD+A P+ N G + +A ++G P Sbjct: 66 AALLQAHQPRAVLNFAAESHVDRAIRGPDAFIHTNVTGTFQLLEAVRAYWQALGEPARTG 125 Query: 96 ---IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L P E P P N Y SK AG+ V +Y + Y Sbjct: 126 FRYLQVSTDEVYGSLGPQDPPFAEGDPYRPNNPYSASKAAGDHLVRAYWHTY 177 >gi|156740921|ref|YP_001431050.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156232249|gb|ABU57032.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 334 Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 8/121 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADS 90 D+ P +PD + + AA + ++ D P + N EG A+ + A Sbjct: 67 DIEDPYSVMRAVERAAPDRVYHLAAQSYPSESWDAPIVTMRTNVEGTINVLEAVRRHAPR 126 Query: 91 IGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK----LAGEEKVASYTNNYVILR 146 + S +Y + TPI E PT PL+ YG SK L+G + A+Y + V+ R Sbjct: 127 ARVHLAGTSAEYGWVQPEDTPIPETHPTRPLSPYGVSKVAAGLSGLQYAANYGMHVVVTR 186 Query: 147 T 147 + Sbjct: 187 S 187 >gi|254991686|ref|ZP_05273876.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-064] gi|255522277|ref|ZP_05389514.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J1-175] Length = 327 Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +++ AA + V ++ + P + + N G + + + G+ I S+ Sbjct: 58 LSSVFEKEKVDGVVHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|325680888|ref|ZP_08160425.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 8] gi|324107352|gb|EGC01631.1| dTDP-glucose 4,6-dehydratase [Ruminococcus albus 8] Length = 342 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+++N AA + VD++ + PEI N G + A GI Sbjct: 58 IDICDREAIYKLFEEEKPDIVVNFAAESHVDRSIENPEIFLQTNILGTQVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + V +Y Y Sbjct: 118 QRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYHRTY 171 >gi|239981702|ref|ZP_04704226.1| putative UDP-glucose 4-epimerase [Streptomyces albus J1074] gi|291453563|ref|ZP_06592953.1| UDP-glucose 4-epimerase [Streptomyces albus J1074] gi|291356512|gb|EFE83414.1| UDP-glucose 4-epimerase [Streptomyces albus J1074] Length = 334 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ +L + D +++ AA++ V ++ +PE + N G A+ A G+ ++ ST Sbjct: 58 AARWLDPTYDGVLHFAAFSQVGESVVDPEKYWVNNVGGTTALLAAMREAGVRRLVFSSTA 117 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG-- 155 + P+ E PT P + YG SKLA + ++ + + + LR V +G Sbjct: 118 ATYGEPVSVPLTETDPTAPTSPYGASKLAVDHMISGECHAHGLAAASLRYFNVAGAYGGC 177 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A+ RRE ISV + + TP Sbjct: 178 GERHDPESHLIPLVLQVAQGRREAISVYGEDYPTP 212 >gi|332365416|gb|EGJ43177.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK355] Length = 286 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E + +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYKQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEILGDRVITKET 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 +P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QESPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|325688832|gb|EGD30840.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK115] Length = 286 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKK-YVSSREDVQVDELDVRGEAWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKGEGVKQFIFMSSMSVYGEVLGDRVITKET 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|292493301|ref|YP_003528740.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] gi|291581896|gb|ADE16353.1| NAD-dependent epimerase/dehydratase [Nitrosococcus halophilus Nc4] Length = 329 Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 21/184 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--------GRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G G I L+ C++ + +R+ + DL++ + S + Sbjct: 1 MKVLITGGTGFIGTRLALKCLEKGDKVRLLGQVNNAAEEGNRDLVERQGGEIVIGSVTDK 60 Query: 53 VIINPA--------AYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDY 102 +I+ A A + P+ F +N G + +A+ + ++ ST Sbjct: 61 DVIDKAIEGVEIVYHLAAAQHEANVPDQHFWEVNVAGTRNLLEASRKDNVKRFVHGSTIG 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--VILRTAWVYSIFGSNFLL 160 V+ IDE +P P NIYG +K GE+ V SY + VI+R + Y G LL Sbjct: 121 VYGAAMEGEIDEDTPLQPDNIYGITKREGEKLVLSYKDRLPVVIIRISETYGP-GDRRLL 179 Query: 161 SMLR 164 +L+ Sbjct: 180 KLLK 183 >gi|257884317|ref|ZP_05663970.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|293567428|ref|ZP_06678775.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|294620737|ref|ZP_06699944.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] gi|257820155|gb|EEV47303.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|291589825|gb|EFF21626.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|291599717|gb|EFF30727.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] Length = 329 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +P NP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTP 215 >gi|116250375|ref|YP_766213.1| hypothetical protein RL0604 [Rhizobium leguminosarum bv. viciae 3841] gi|115255023|emb|CAK06097.1| putative UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [Rhizobium leguminosarum bv. viciae 3841] Length = 357 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ A+ GI Sbjct: 64 DVADPDILKKVFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSASVKAGIR 123 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G +T P+ E +P NP N YG+SKL E + A+Y NYV LR Sbjct: 124 NFVFSSTAAVYGQQKTDLPVKETAPLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 181 >gi|327460022|gb|EGF06361.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK1] Length = 286 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 KERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|251792406|ref|YP_003007132.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] gi|247533799|gb|ACS97045.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] Length = 349 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 35/177 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 M+ L+ G G I +L +Q DV ++ V + +D+ Sbjct: 1 MQILITGGAGFIGSALIRYLIQTTDVRVVNVDKLTYAANLASLETISDNPRYIFEQLDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------- 88 A F+ + PD +++ AA + VD++ D P N G ++ +AA Sbjct: 61 DSNALARLFMQYQPDCVVHLAAESHVDRSIDGPSAFIQSNIVGTYSLLEAARHYYYTLSA 120 Query: 89 -DSIGIPCIYISTDYVF-DGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ D T + E SP P + Y SK + + V ++ Y Sbjct: 121 EKQAAFRFLHVSTDEVYGDTAGETTLSTETSPYAPSSPYSASKASADHLVRAWHRTY 177 >gi|108805895|ref|YP_645832.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] gi|108767138|gb|ABG06020.1| NAD-dependent epimerase/dehydratase [Rubrobacter xylanophilus DSM 9941] Length = 306 Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 3/116 (2%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A F F P+ + + AA V ++ EP+ +N G + +A G+ ++ ST Sbjct: 57 AGVFEDFRPEAVSHQAAQMDVRRSVAEPDFDAEVNVIGTVRLLEACVRGGVRRVVFASTG 116 Query: 102 YVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 G P E P P++ YG SKLAGE + Y Y + A YS ++G Sbjct: 117 GAIYGEQEEFPATERHPQYPISPYGVSKLAGERYLHYYNAQYGLPYAALRYSNVYG 172 >gi|126739304|ref|ZP_01754997.1| NAD-dependent epimerase/dehydratase family protein [Roseobacter sp. SK209-2-6] gi|126719404|gb|EBA16113.1| NAD-dependent epimerase/dehydratase family protein [Roseobacter sp. SK209-2-6] Length = 342 Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 17/163 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--------DLLKPKDFASFFLSFSPDV 53 K LV G++G I +L S +R R DI D+L P + AS + + Sbjct: 22 KILVTGSSGLIGTALCSTFESLGHEVR--RFDITDTNGGFGDVLSPANLASAMVDCTG-- 77 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSRTP 111 +++ AA + V +++PE + N G + A ++ I+ S+ V+ + P Sbjct: 78 VVHLAAVSRVIWGQEDPEGCYLTNVIGTQNVIDQLRASALQPWLIFGSSREVYGQSNLLP 137 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVY 151 + E +P P+N Y +SK+A E+ V + +LR + VY Sbjct: 138 VTENTPLRPMNDYARSKVAAEKAVQRVGEDGFRTAVLRFSTVY 180 >gi|260459639|ref|ZP_05807893.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] gi|259034441|gb|EEW35698.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum WSM2075] Length = 335 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 26/159 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPAA 59 M+ ++ G +G + + L+ V D E + V D++K D A + + F + +PA+ Sbjct: 1 MRHVIFGGDGFVGRHLAPKLVADGEEVVVA----DIVK-SDLAHYRNVRFVTCDVTDPAS 55 Query: 60 YTAVD-KAED------------------EPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 AV KA D + F +N G I +A D G P ++ + Sbjct: 56 VAAVGLKAGDMVYNLSAKMLSPIQVRAKRHDFFFPVNFNGTEHIMQAMDRAGAPKLVHYT 115 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 TD ++ P+ E P PL YG SK EE A + Sbjct: 116 TDMIYGHTVTQPMTEDHPVAPLGEYGWSKQKTEELAAVW 154 >gi|241203009|ref|YP_002974105.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856899|gb|ACS54566.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 344 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ A+ GI Sbjct: 51 DVADPDILKKVFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSASVKAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G +T P+ E +P NP N YG+SKL E + A+Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQKTDLPVKETAPLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 168 >gi|328944713|gb|EGG38874.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK1087] Length = 286 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRVITKNT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|330507807|ref|YP_004384235.1| NAD-dependent nucleotide sugar epimerase [Methanosaeta concilii GP-6] gi|328928615|gb|AEB68417.1| NAD-dependent nucleotide sugar epimerase [Methanosaeta concilii GP-6] Length = 318 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 19/164 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V + +P IN G I +AA G+ +Y S+ ++ + Sbjct: 78 DCVFHLAAQAGVRASVKDPIKVHEINTMGTLNILQAALDCGVKRLVYASSSSIYGKVKYL 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY----------SIFGS 156 P DE P P++ YG SKL EE ++ Y V LR VY SIF + Sbjct: 138 PFDESHPRVPVSPYGLSKLMAEEYCRIFSEIYGLETVSLRYFTVYGPRMRPDLAISIFAN 197 Query: 157 NFL----LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 L L + ++ R+ + + D A++ R + I Sbjct: 198 RALQDLPLEIFGPGEKTRDFTYIDDVVCANALAMKCNRGVFNIG 241 >gi|320335561|ref|YP_004172272.1| dTDP-glucose 4,6-dehydratase [Deinococcus maricopensis DSM 21211] gi|319756850|gb|ADV68607.1| dTDP-glucose 4,6-dehydratase [Deinococcus maricopensis DSM 21211] Length = 340 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-- 104 L ++I+N AA T VD++ P + N G + + A +GI +ISTD V+ Sbjct: 71 LEHQTELIVNFAAETHVDQSIAGPLVFTDTNVRGTHVLLEVARELGIRFHHISTDEVYGH 130 Query: 105 --DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D T D P +P Y SK A ++ V +Y Y Sbjct: 131 IEDQHQSTEEDPLLPRSP---YAASKAAADQLVQAYHITY 167 >gi|126696737|ref|YP_001091623.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9301] gi|126543780|gb|ABO18022.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9301] Length = 344 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 6/116 (5%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + P +++N AA V + + PE N G I +A S + IY S+ V+ Sbjct: 81 FEKYRPKIVVNLAAQAGVRYSLENPEAYIKSNLVGFFNILEACKSFDVENFIYASSSSVY 140 Query: 105 DGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 G + P E +N P+++Y +K + E SY++ Y I LR VY +G Sbjct: 141 GGNKKVPFKENDSSNHPISLYAATKRSNELMAHSYSHLYDIPSIGLRFFTVYGPWG 196 >gi|170288108|ref|YP_001738346.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|33413324|emb|CAD67949.1| putative dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|170175611|gb|ACB08663.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] Length = 342 Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVF 104 F PDV+IN AA + VD++ + P+I N G + A+ + + +STD V+ Sbjct: 70 FEEEKPDVVINFAAESHVDRSIESPDIFLKTNILGTQVLLDASRKYNVKRFHQVSTDEVY 129 Query: 105 DGL----SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L S E SP P + Y SK + + V +Y Y Sbjct: 130 GDLPLDRSDLKFTESSPLRPSSPYSASKASADLLVLAYHRTY 171 >gi|2326950|gb|AAB66648.1| rhamnose biosynthesis protein [Mycobacterium tuberculosis] Length = 329 Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 14/105 (13%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D +++ AA + VD A D PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTDEVYGDLELDD 131 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 R E +P NP + Y +K + +L AWV S+ Sbjct: 132 RARFTESTPYNPSSPYSATKAGAD-----------MLVRAWVRSL 165 >gi|329113801|ref|ZP_08242572.1| dTDP-glucose 4,6-dehydratase [Acetobacter pomorum DM001] gi|326696811|gb|EGE48481.1| dTDP-glucose 4,6-dehydratase [Acetobacter pomorum DM001] Length = 352 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--------- 95 F SF PD +++ AA + VD++ D P + N G ++ +AA + Sbjct: 68 LFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMTLDKEAQEAFR 127 Query: 96 -IYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK + + V ++ + + Sbjct: 128 FHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTF 177 >gi|294791315|ref|ZP_06756472.1| dTDP-glucose 4,6-dehydratase [Scardovia inopinata F0304] gi|294457786|gb|EFG26140.1| dTDP-glucose 4,6-dehydratase [Scardovia inopinata F0304] Length = 400 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D A +P+ N G + +AA G+ ++STD VF L Sbjct: 134 DAIVHFAAESHNDNAIYDPDPVMKTNIMGTFTMLQAARRYGVRFHHVSTDEVFGDLPLDS 193 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +EF SP P + Y SK A + V S+ Y + T Sbjct: 194 QEEFTEDSPYRPSSPYAASKAASDHLVRSWVRTYGLQAT 232 >gi|332366517|gb|EGJ44263.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1059] Length = 347 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + + Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECSVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|310817082|ref|YP_003965046.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] gi|308755817|gb|ADO43746.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] Length = 349 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F +PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DIRDAAALEAVFARHAPDAVMHLAAESHVDRSIDGPGAFVETNVMGTYTLLQAARAYWEG 116 Query: 92 -----GIPCIYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD VF L P +F +P +P + Y SK A + V ++ Y Sbjct: 117 RGKPEGFRFHHISTDEVFGSLPHDPAVKFTEDTPYDPRSPYSASKAASDHLVRAWHETY 175 >gi|206900269|ref|YP_002251066.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] gi|206739372|gb|ACI18430.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] Length = 329 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DL + F + D I++ AA + V ++ EP + N G + + Sbjct: 49 NVDLKEKNLLKGVFEKYEIDAIMHFAALSTVGESMREPFKYYENNILGGLNLLELMKDHN 108 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 I I+ ST V+ PI E P NP N+YG SKL EE + Y Y I Sbjct: 109 IKYFIFSSTAAVYGEPQVIPIPEDHPKNPTNVYGSSKLMFEEILNWYDRIYGI 161 >gi|69246798|ref|ZP_00604127.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257878551|ref|ZP_05658204.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257883186|ref|ZP_05662839.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257889251|ref|ZP_05668904.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257894691|ref|ZP_05674344.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|258615922|ref|ZP_05713692.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|260560137|ref|ZP_05832315.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|261208165|ref|ZP_05922839.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289566214|ref|ZP_06446647.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|293559382|ref|ZP_06675923.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] gi|294614216|ref|ZP_06694135.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|294618872|ref|ZP_06698384.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|68195089|gb|EAN09550.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257812779|gb|EEV41537.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257818844|gb|EEV46172.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257825611|gb|EEV52237.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257831070|gb|EEV57677.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|260073972|gb|EEW62296.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|260077599|gb|EEW65316.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289161992|gb|EFD09859.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|291592875|gb|EFF24465.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|291594872|gb|EFF26237.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|291606667|gb|EFF36060.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] Length = 329 Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K+F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +P NP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTP 215 >gi|320529981|ref|ZP_08031057.1| UDP-glucose 4-epimerase [Selenomonas artemidis F0399] gi|320137778|gb|EFW29684.1| UDP-glucose 4-epimerase [Selenomonas artemidis F0399] Length = 331 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + +A G+ ++ ST V Sbjct: 63 IFTERSIEAVLHFAANSLVGESMEQPLLYFNNNVYGMQVLLEAMVRHGVDKIVFSSTAAV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + R PI E TNP N YG++KL E+ Sbjct: 123 YGEPKRVPIREDDETNPTNAYGETKLTMEK 152 >gi|258620604|ref|ZP_05715641.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM573] gi|258587119|gb|EEW11831.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM573] Length = 290 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 32/236 (13%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQD-VEIIRVGRP-----------------DIDLLKPKD 41 MK L++G G + SL +++ D E+ R DID+ Sbjct: 1 MKILIVGTTGMLGYSLFTNLSDHDGYEVFGTVRNILGKEKFFEEYLDNLIFDIDVNDFSR 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S + PDV+IN A IN+ IA+ D + I+ STD Sbjct: 61 LKSAIETIKPDVVINCIGLIKQHDISKRHINAIEINSLLPHKIAQVCDGVSAKLIHFSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G I+ P + +IYGKSK GE ++ LRT+ + ++ L Sbjct: 121 CVFSGKEGKYIETDIP-DATDIYGKSKCLGEVNYGG----HLTLRTSIIGHELNTSVSLI 175 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L + + F G PT IA +I+ ++ N L G+FH++ D Sbjct: 176 DWFLTQNNKVNGFSKAVFSGLPTC--YIANILIKY---ILPNK--QLNGLFHLSVD 224 >gi|254282060|ref|ZP_04957028.1| UDP-glucose 4-epimerase [gamma proteobacterium NOR51-B] gi|219678263|gb|EED34612.1| UDP-glucose 4-epimerase [gamma proteobacterium NOR51-B] Length = 330 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 Q E++ V D+ L+ F I + AA + V ++++E + + N + Sbjct: 40 ATQGQEVVEVDLKDLPALRAALAGREFHG-----IFHFAAKSLVGESDEEALLYYQNNVD 94 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + + A G C++ ST V+ IDE P P+N+YG++KLA E + Sbjct: 95 GTSNLLRVALENGWHRCVFSSTAAVYGNPVTATIDEDHPKAPINVYGETKLAMENLLEGV 154 Query: 139 TNN 141 N+ Sbjct: 155 CNS 157 >gi|56790851|gb|AAW30158.1| GalE [Lactobacillus rhamnosus] Length = 331 Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N G + +A + GI ++ ST + + Sbjct: 68 DGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E P P N YG+SKLA E+ + +Y YV LR Sbjct: 128 PIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKYVALR 167 >gi|324992619|gb|EGC24540.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK405] gi|327488612|gb|EGF20412.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK1058] Length = 286 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKGEGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|227545148|ref|ZP_03975197.1| UDP-galactose 4-epimerase [Lactobacillus reuteri CF48-3A] gi|227184880|gb|EEI64951.1| UDP-galactose 4-epimerase [Lactobacillus reuteri CF48-3A] Length = 331 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +++ AA++ V ++ +P F N G + +A I I S+ G+ PI Sbjct: 70 VVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAATYGVPEHMPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG------------- 155 E P NP+N YG SKL EE +A +Y +V LR +++ G Sbjct: 130 KETDPQNPINPYGLSKLMMEEMMAWADKAYGIKFVALR---YFNVAGAAPDGTIGEDHGP 186 Query: 156 -SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + +L++A+ +R E+S+ D + TP Sbjct: 187 ETHLVPIILQVAQGKRDELSIFGDDYNTP 215 >gi|110799171|ref|YP_695359.1| capsular polysaccharide biosynthesis protein [Clostridium perfringens ATCC 13124] gi|110673818|gb|ABG82805.1| capsular polysaccharide biosynthesis protein [Clostridium perfringens ATCC 13124] Length = 614 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 23/135 (17%) Query: 23 DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 D+E+I D LK F + PD+I + AA+ V E+ PE A N G Sbjct: 333 DLEVIIASIRDKSRLK-----KIFDKYKPDLIFHAAAHKHVPLMENNPEEAIKNNVLGTL 387 Query: 83 AIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +A+ AD + ++ISTD NP NI G +K GE + + Sbjct: 388 NVAECADEFNLEKFVFISTD--------------KAVNPTNIMGATKRIGEMIIQAMNE- 432 Query: 142 YVILRTAWVYSIFGS 156 + +T +V FG+ Sbjct: 433 --VSKTDFVAVRFGN 445 >gi|329926761|ref|ZP_08281169.1| UDP-glucose 4-epimerase [Paenibacillus sp. HGF5] gi|328938961|gb|EGG35329.1| UDP-glucose 4-epimerase [Paenibacillus sp. HGF5] Length = 329 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F D +I+ AA + V ++ +P + N G + +A + G+ Sbjct: 50 DLRDKALLKQLFSENDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVR 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST + + PI+E T P N+YG++KL E ++ + YV LR Sbjct: 110 KIVFSSTAATYGEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFN 169 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGTP 182 + G S+ + +L+ A K+R ISV D + TP Sbjct: 170 AAGSHASGKIGEDHRPESHLIPLVLQTALKQRASISVFGDDYATP 214 >gi|241207014|ref|YP_002978110.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860904|gb|ACS58571.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 327 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G I + ++ + +R G P I +L FSPD +I+ A Sbjct: 19 CKALSRAGMIPVTYDNLSTGHADSVRWG-PLIRAELADAAALRRTLAEFSPDCVIHCGAN 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ D P + N G+ + +A I I S+ G+ + PI E SP + Sbjct: 78 AYVGESVDMPRKYYRNNVVGSLTLLEACLDQEIDRIVFSSSCATYGVPASLPIREESPQH 137 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P+N YG++KL E + + Y I A Y Sbjct: 138 PVNPYGRTKLIFEMALEDFAAAYGIRFAALRY 169 >gi|254302366|ref|ZP_04969724.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322558|gb|EDK87808.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 329 Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust. Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------------GRPDIDL--LKPKDFAS- 44 M LV G G I + ++ E + V R ++L LK ++F + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDERAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG------- 155 + PI E T P N YG+SKLA E+ N Y + TA Y ++ G Sbjct: 121 YGEAENMPILETDKTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAHPSGEI 180 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L++A +RE I++ D + TP Sbjct: 181 GEAHTCETHLIPLILQVALGQREKIAIYGDDYPTP 215 >gi|167646677|ref|YP_001684340.1| CDP-glucose 4,6-dehydratase [Caulobacter sp. K31] gi|167349107|gb|ABZ71842.1| CDP-glucose 4,6-dehydratase [Caulobacter sp. K31] Length = 366 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 3/112 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P A+ L F+P V+++ AA V ++ DEP F+ N G + A + P Sbjct: 68 DVRDPHAVAAAVLDFTPSVVLHMAAQPLVRRSYDEPRETFATNLMGTVNLLDAVRRLPRP 127 Query: 95 C--IYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 + ++TD V++ L P E + Y SK E V +Y Y+ Sbjct: 128 ATTLIVTTDKVYENLEHGQPYREGDRLGGRDPYSASKACAELAVRAYFAAYL 179 >gi|110668556|ref|YP_658367.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626303|emb|CAJ52761.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 305 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDF--------ASFFLSFSP-- 51 + LV G G I +L++ + E+I V D+ L P + AS P Sbjct: 5 RVLVTGGAGFIGSNLANHLAETNEVIAV--DDLHLGTPSNLDETVEFVNASVLEDDLPTA 62 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEG-AGAIAKAADSIGIPCIYISTDYVFDGLS 108 DV+ + AAY++ E+ + A +N EG + +A + +Y ST ++ G Sbjct: 63 DIDVVFHLAAYSSYTMVEENKQTATRVNVEGFVNTVEQAREDGCQTVVYASTSSIY-GSR 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 P E P Y SKLA E + N+Y + LR VY +G Sbjct: 122 TNPSPEDLPVEARTCYEASKLARETYAEYFNNHYDMTLAGLRFFSVYQGYG 172 >gi|99079857|ref|YP_612011.1| UDP-galactose 4-epimerase [Ruegeria sp. TM1040] gi|99036137|gb|ABF62749.1| UDP-galactose 4-epimerase [Ruegeria sp. TM1040] Length = 327 Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F + P +++ AA + V +A EP ++ N G+ + +AA + G + Sbjct: 51 DLTDRGRLDEVFAQYKPVAVMHFAALSQVGEAMSEPGRYWANNVGGSLCLIEAAVAAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + +DE +P PLN YG SK A E+ Sbjct: 111 DFVFSSTCATYGEHDNVVLDENTPQQPLNAYGASKRAVED 150 >gi|294793488|ref|ZP_06758625.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|294455058|gb|EFG23430.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 329 Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PI 112 +++ AA++ V ++ P I + N G+ + ++A + GI S+ G + PI Sbjct: 69 VMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIKHFVFSSTAAVHGEPKVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL EE ++ Y+ + YV LR Sbjct: 129 REDAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYVALR 166 >gi|325697297|gb|EGD39183.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK160] Length = 286 Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKK-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E + +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYKQVNTQLPYELAQKAKGEGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 EERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|332558582|ref|ZP_08412904.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] gi|332276294|gb|EGJ21609.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides WS8N] Length = 330 Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 4/134 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G S ++ + +R G P + D+ P + + +I+ AA Sbjct: 19 CKALARAGHRPVSFDNLSTGHADAVRFG-PLVQGDVRDPSAVEAALRAHGATAVIHFAAS 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ +P + N G + + + G+ I S+ G R PI E +P Sbjct: 78 AYVGESMADPAKYYDNNVGGMIGLVQGCRAAGVSRIVFSSSCATYGTPDRLPIRETTPQR 137 Query: 120 PLNIYGKSKLAGEE 133 P+N YG++KL GEE Sbjct: 138 PINPYGRTKLIGEE 151 >gi|19705399|ref|NP_602894.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713390|gb|AAL94193.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 329 Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNNNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|327467907|gb|EGF13397.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK330] Length = 286 Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|332709243|ref|ZP_08429207.1| UDP-glucose 4-epimerase [Lyngbya majuscula 3L] gi|332351968|gb|EGJ31544.1| UDP-glucose 4-epimerase [Lyngbya majuscula 3L] Length = 318 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 ++ + DI KP+DF + F + D I + AA +V + +P A N A+ + Sbjct: 47 LKFLQKDISTCKPEDFITKFTN-KIDGIAHLAATPSVTASWLQPLEAHHNNLSATIAVIE 105 Query: 87 AADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----N 141 ++ IP ++ S+ V+ ++ PI E T+P++ YG KL E+ + + + Sbjct: 106 LCKTLNIPKLVFASSAAVYGNPTQVPISENQQTSPISPYGLQKLVSEQYASLFAKQIDFS 165 Query: 142 YVILRTAWVYSIFG 155 +V LR +++FG Sbjct: 166 FVGLR---FFNVFG 176 >gi|296328346|ref|ZP_06870873.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154525|gb|EFG95315.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 329 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNNNVDK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|261405466|ref|YP_003241707.1| UDP-glucose 4-epimerase [Paenibacillus sp. Y412MC10] gi|261281929|gb|ACX63900.1| UDP-glucose 4-epimerase [Paenibacillus sp. Y412MC10] Length = 329 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F D +I+ AA + V ++ +P + N G + +A + G+ Sbjct: 50 DLRDKALLKQLFSDNDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVR 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST + + PI+E T P N+YG++KL E ++ + YV LR Sbjct: 110 KIVFSSTAATYGEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFN 169 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGTP 182 + G S+ + +L+ A K+R ISV D + TP Sbjct: 170 AAGSHASGKIGEDHRPESHLIPLVLQTALKQRASISVFGDDYATP 214 >gi|156933363|ref|YP_001437279.1| hypothetical protein ESA_01176 [Cronobacter sakazakii ATCC BAA-894] gi|156531617|gb|ABU76443.1| hypothetical protein ESA_01176 [Cronobacter sakazakii ATCC BAA-894] Length = 331 Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 33/69 (47%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N EG + A D I I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVEGTRNVLDAMDKHNIKNIIFTSSVAVYGLNKKNPDENHPVDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWFN 148 >gi|325295553|ref|YP_004282067.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066001|gb|ADY74008.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 327 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 7/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F F PD +++ AA+ V ++ EP + N + + G+ Sbjct: 50 DLEDKNTLDVIFKEFRPDAVMHFAAFIEVAQSLREPLKYYKNNTVNTINLLEVMLKNGVN 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 I+ ST V+ + PI E P P+N YG+SK A EKV SY YV LR Sbjct: 110 KFIFSSTAAVYGNPEKVPIPEIEPIKPINPYGQSK-AFVEKVLQDFDKSYGLKYVSLR 166 >gi|332982139|ref|YP_004463580.1| NAD-dependent epimerase/dehydratase [Mahella australiensis 50-1 BON] gi|332699817|gb|AEE96758.1| NAD-dependent epimerase/dehydratase [Mahella australiensis 50-1 BON] Length = 314 Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD---GLS 108 D+ + AA V + D+P F +A G I + +++ST V+D S Sbjct: 73 DICYHLAASINVQDSIDDPAATFHNDAVGTFNILEQCRKHHTKMVFMSTCMVYDKANASS 132 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 IDE PT P + Y +K+AGE V SY Sbjct: 133 GKAIDEHHPTKPASPYAGAKIAGENMVLSY 162 >gi|300909179|ref|ZP_07126640.1| UDP-glucose 4-epimerase [Lactobacillus reuteri SD2112] gi|300893044|gb|EFK86403.1| UDP-glucose 4-epimerase [Lactobacillus reuteri SD2112] Length = 338 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +++ AA++ V ++ +P F N G + +A I I S+ G+ PI Sbjct: 77 VVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAATYGVPEHMPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG------------- 155 E P NP+N YG SKL EE +A +Y +V LR +++ G Sbjct: 137 KETDPQNPINPYGLSKLMMEEMMAWADKAYGIKFVALR---YFNVAGAAPDGTIGEDHGP 193 Query: 156 -SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + +L++A+ +R E+S+ D + TP Sbjct: 194 ETHLVPIILQVAQGKRDELSIFGDDYNTP 222 >gi|240144699|ref|ZP_04743300.1| putative epimerase/dehydratase WbiI [Roseburia intestinalis L1-82] gi|257203218|gb|EEV01503.1| putative epimerase/dehydratase WbiI [Roseburia intestinalis L1-82] Length = 622 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 48/265 (18%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 ++V PD+DL+ F ++ P++I + AA+ V E+ P A N Sbjct: 338 LKVKFPDLDLVVLIGSVRNTNRMNWIFETYHPEIIYHAAAHKHVPLMEESPNEAIKNNVL 397 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G I +AAD + + ISTD NP NI G SK E + +Y Sbjct: 398 GTWKIVQAADRYHVKRFVMISTD--------------KAVNPTNIMGASKRICEMIIQTY 443 Query: 139 TN----NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL--QIARAI 192 YV +R ++ GSN S++ L K++ E G P + I R Sbjct: 444 NKRSETEYVAVRFG---NVLGSNG--SVIPLFKKQIE-------RGGPVTVTDPNIVRYF 491 Query: 193 IQI--AHNLIENSDTSLRG--IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT 248 + I A +L+ + +G IF + G PV D A+ + S + P + +FT Sbjct: 492 MTIPEAVSLVLQAGAYAKGGEIFVLDM-GEPVKILDLAKNLILLSGHK--PDEDIQIVFT 548 Query: 249 KQYPTKAHRPAYSCLDCSKLANTHN 273 P + +D L +T N Sbjct: 549 GLRPGEKLYEE-MLMDEEGLQDTEN 572 >gi|157803929|ref|YP_001492478.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia canadensis str. McKiel] gi|157785192|gb|ABV73693.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia canadensis str. McKiel] Length = 284 Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 19/178 (10%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F F PD++IN +P A IN+ +A D +G I+ISTD Sbjct: 61 FVKAFNKIKPDIVINCIGLVKQLVDVGDPLKALPINSLLPHRLAGLCDLVGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G + E + ++YG+SKL GE Y N + LRT+ + N L+ Sbjct: 121 CVFSG-KKGNYKESDFPDCYDLYGRSKLLGE---VDYPNA-ITLRTSIIGHELAGNRSLT 175 Query: 162 MLRLAKERR----EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L+ E E ++ G PT +++AR I + LRG++H+ + Sbjct: 176 NWFLSAEGSVKGFEKAIYS---GFPT--VELARIIRDFVL-----PNKELRGLYHVAS 223 >gi|258542880|ref|YP_003188313.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256633958|dbj|BAH99933.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256637018|dbj|BAI02987.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-03] gi|256640070|dbj|BAI06032.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-07] gi|256643127|dbj|BAI09082.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-22] gi|256646182|dbj|BAI12130.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-26] gi|256649234|dbj|BAI15175.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-32] gi|256652221|dbj|BAI18155.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655278|dbj|BAI21205.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--------- 95 F SF PD +++ AA + VD++ D P + N G ++ +AA + Sbjct: 68 LFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMGLDKEAQQAFR 127 Query: 96 -IYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK + + V ++ + + Sbjct: 128 FHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTF 177 >gi|327472168|gb|EGF17605.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK408] Length = 286 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I QS V E ++V D+ + + KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGQSFKR-YVSLREDVQVDELDVRGETWREKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 EERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|289578903|ref|YP_003477530.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] gi|289528616|gb|ADD02968.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] Length = 329 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDFA-SF 45 M LV G G I + +++++ + E++ V G+ I L+ + F Sbjct: 1 MAILVCGGAGYIGSHTVAALLNRKEEVVVVDNLVKGHKKSVLGGKLYIGDLRDEAFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + +I+ AA++ V ++ +EP + N G ++ KA + ++ ST V+ Sbjct: 61 FKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMKKHNVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 R PI E TNP + YG++KLA E+ + +Y YV LR Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALR 166 >gi|34762698|ref|ZP_00143689.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887655|gb|EAA24733.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 323 Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 18/164 (10%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 LK ++F + F + D +I+ AA++ V ++ EP F N G + K + + Sbjct: 52 LKDEEFLNRVFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVNK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SI 153 ++ ST + PI E T P N YG+SKLA E+ N Y + TA Y ++ Sbjct: 112 IVFSSTAATYGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNV 171 Query: 154 FG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 G ++ + +L++A +RE IS+ D + TP Sbjct: 172 AGAYPSGEIGEAHTCETHLIPLILQVALGQREKISIYGDDYPTP 215 >gi|315641214|ref|ZP_07896291.1| UDP-glucose 4-epimerase [Enterococcus italicus DSM 15952] gi|315482981|gb|EFU73500.1| UDP-glucose 4-epimerase [Enterococcus italicus DSM 15952] Length = 348 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA + V ++ ++P FS N G + + + ++ ST + Sbjct: 87 DGILHFAASSLVGESVEKPLKYFSNNVTGMEILLEVMHESNVKKIVFSSTAATYGEPEVV 146 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 147 PISETNPTNPTNPYGESKLMMEKMMKWCDGAYGMKYVALR---YFNVAGAKQDASIGEDH 203 Query: 156 ---SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R E+ + D + TP Sbjct: 204 TPETHLVPIILQVALGQREELKIFGDDYDTP 234 >gi|258543634|ref|YP_003189067.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256634712|dbj|BAI00688.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01] gi|256637768|dbj|BAI03737.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-03] gi|256640822|dbj|BAI06784.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-07] gi|256643877|dbj|BAI09832.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-22] gi|256646932|dbj|BAI12880.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-26] gi|256649985|dbj|BAI15926.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-32] gi|256652975|dbj|BAI18909.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656029|dbj|BAI21956.1| dTDP-glucose 4,6-dehydratase [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--------- 95 F SF PD +++ AA + VD++ D P + N G ++ +AA + Sbjct: 68 LFNSFKPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSMLEAARKYWMGLDKEAQQAFR 127 Query: 96 -IYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK + + V ++ + + Sbjct: 128 FHHISTDEVFGALGPNDPPFTETTPYDPRSPYSASKASSDHLVRAWYHTF 177 >gi|297545125|ref|YP_003677427.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842900|gb|ADH61416.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 329 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDFA-SF 45 M LV G G I + +++++ + E++ V G+ I L+ + F Sbjct: 1 MAILVCGGAGYIGSHTVAALLNRKEEVVVVDNLVKGHKKSVLGGKLYIGDLRDEAFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + +I+ AA++ V ++ +EP + N G ++ KA + ++ ST V+ Sbjct: 61 FKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMKKHNVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 R PI E TNP + YG++KLA E+ + +Y YV LR Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALR 166 >gi|241205937|ref|YP_002977033.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859827|gb|ACS57494.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 338 Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%) Query: 31 RPDIDLLKPKD-FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 RP I +L+ + + L+ PD++I+ AA V + + PE N EG+ I + A Sbjct: 56 RPVISMLEDRPALEAAVLAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGSWNIMEIAR 115 Query: 90 SIGIPCIYI-STDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRT 147 + I + + ST ++ + P E + PL IY +K + E SY + + I T Sbjct: 116 RVEIRHLMLASTSSIYGANATVPFHETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTT 175 Query: 148 AW-VYSIFG 155 A+ ++++G Sbjct: 176 AFRFFTVYG 184 >gi|152993516|ref|YP_001359237.1| UDP-glucose 4-epimerase [Sulfurovum sp. NBC37-1] gi|151425377|dbj|BAF72880.1| UDP-glucose 4-epimerase [Sulfurovum sp. NBC37-1] Length = 346 Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ D + F D +I+ A AV ++ ++P + N G A+ K G Sbjct: 68 DIRNKADLRAVFNEHKIDAVIHFAGLKAVGESVEQPLRYYDNNVYGTVALCKVMQEHGCK 127 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I + S+ V+ + TPI E PT+ N YG+SKL EE Sbjct: 128 SIIFSSSATVYGDPATTPITENFPTSATNPYGRSKLFIEE 167 >gi|313905441|ref|ZP_07838806.1| UDP-glucose 4-epimerase [Eubacterium cellulosolvens 6] gi|313469764|gb|EFR65101.1| UDP-glucose 4-epimerase [Eubacterium cellulosolvens 6] Length = 324 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL D + F + + + + AAY V ++ +EPE + N + K S G Sbjct: 50 DLANHIDIEAAFEKYDIEAVFHFAAYAYVGESVEEPEKYYYNNVVNTLNLLKVMRSHGCN 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ ST + + PI E P NP+N YG +KL E Y Y Sbjct: 110 KIIFSSTCATYGEPEKVPITEDMPQNPINPYGVTKLTVERIFKDYAKAY 158 >gi|160893015|ref|ZP_02073803.1| hypothetical protein CLOL250_00553 [Clostridium sp. L2-50] gi|156865098|gb|EDO58529.1| hypothetical protein CLOL250_00553 [Clostridium sp. L2-50] Length = 341 Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 5/103 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYV 103 F PD+I+N AA + VD++ + P+I N G + A GI + +STD V Sbjct: 71 LFEEEKPDIIVNFAAESHVDRSIENPDIFLKTNIMGTAVLMDACRKYGIERYHQVSTDEV 130 Query: 104 FDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + L D F +P + + Y SK A + V +Y Y Sbjct: 131 YGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 173 >gi|289644283|ref|ZP_06476369.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289505895|gb|EFD26908.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 323 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 42/214 (19%) Query: 1 MKCLVIGN----NGQIAQSLSSMCVQDVEIIRVGR------PDIDLLKPKDFASFF---- 46 M+ LV G G + +L++ Q ++R GR P ++++ D F Sbjct: 1 MRVLVTGAAGFVGGAVTDTLAAAGHQVTSLVRSGRSCPPFAPGVEVVA-ADLVDFHELEL 59 Query: 47 --LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI-------AKAADSIGIPCIY 97 L D + + AA T V ++ +P F++N G + KAA + + + Sbjct: 60 ARLDRGFDAVCHLAALTRVRESRYDPLRYFAVNVTGTANLLRLLERGTKAAGTAPV-VVL 118 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSI 153 ST V+ PI E +P P + YG SKLA E+ V A+ V+LR+ V Sbjct: 119 GSTCAVYGTPEIQPIPESTPPAPTHPYGASKLAAEQLVVHQAATGGIGAVVLRSFNVAGA 178 Query: 154 FG-------SNFLLSMLRLAKERREISVVCDQFG 180 G S + + L +A R C+ FG Sbjct: 179 AGRHADNDQSRIIPAALAVAAGR------CESFG 206 >gi|260220299|emb|CBA27698.1| Protein capI [Curvibacter putative symbiont of Hydra magnipapillata] Length = 215 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 3/125 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ D F F P +++ AA V + P+ N G G I + GI Sbjct: 60 IDVAHAHDINEVFEDFKPARLVHLAAQAGVRYSIQNPKAYLDSNLVGFGNILEGCRHNGI 119 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-V 150 +Y S+ V+ G + P E N P+++Y +K A E +Y++ + + T Sbjct: 120 EHLVYASSSSVYGGNTNMPFSEHDSVNHPVSLYAATKKANELMAHTYSHLFRLPTTGLRF 179 Query: 151 YSIFG 155 ++++G Sbjct: 180 FTVYG 184 >gi|227827278|ref|YP_002829057.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] gi|227459073|gb|ACP37759.1| NAD-dependent epimerase/dehydratase [Sulfolobus islandicus M.14.25] Length = 316 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +V+IN AA + VD++ +P+ + N G + +AA ++ISTD V+ Sbjct: 69 EVVINFAAESHVDRSIYKPQDFVTTNVLGTINVLEAARRFNFNYVHISTDEVY---GEEC 125 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE SP NP + Y SK + + V +Y Y Sbjct: 126 GDESSPLNPSSPYSASKASADLFVKAYVRTY 156 >gi|229817053|ref|ZP_04447335.1| hypothetical protein BIFANG_02308 [Bifidobacterium angulatum DSM 20098] gi|229784842|gb|EEP20956.1| hypothetical protein BIFANG_02308 [Bifidobacterium angulatum DSM 20098] Length = 333 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F +PD+ +I+ AA++ V ++ EP F N G + + G+ Sbjct: 53 LADQEFMRGVFRENPDIDAVIHFAAFSLVAESMKEPLKYFDNNTAGMVKLLEVMKEFGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I S+ G+ + PI E P P+N YG+SKL E+ I+R W Sbjct: 113 KIVFSSTAATYGIPEKMPIREDDPQKPINPYGESKLMMEK----------IMR--WCDQA 160 Query: 154 FGSNFL-LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 +G F+ L +A + + S+ D G T L I ++Q+A Sbjct: 161 YGIKFVALRYFNVAGAKPDGSIGEDH-GPETHLLPI---VLQVAQ 201 >gi|223939653|ref|ZP_03631527.1| UDP-glucose 4-epimerase [bacterium Ellin514] gi|223891704|gb|EEF58191.1| UDP-glucose 4-epimerase [bacterium Ellin514] Length = 323 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 17/180 (9%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 +G P+ K D + LS P+ I++ AA T V ++ +P F N + AA Sbjct: 49 LGHPE----KENDLRNAVLSTKPEAILHFAASTLVGESMTDPGKYFHNNVCNGLTLLNAA 104 Query: 89 DSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 G+ ++ ST + + P+ E P P+N YG+SKL E+ + Y + + Sbjct: 105 VEAGVKKFVFSSTCATYGPPDKVPMTEDLPQRPINPYGESKLMFEKMLNWYHQVHKLEFV 164 Query: 148 AWVY-------SIFGSNFLLS---MLRLAKERREISVVCDQFGT--PTSALQIARAIIQI 195 A+ Y FG + + + + K S CD +GT PT R I I Sbjct: 165 AFRYFNAAGASEQFGEHHRIETHLIPNILKVPLGQSKQCDIYGTDYPTPDGTCIRDYIHI 224 >gi|153803532|ref|ZP_01958118.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-3] gi|124120926|gb|EAY39669.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-3] Length = 290 Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 38/239 (15%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQD-VEIIRVGRP-----------------DIDLLKPKD 41 MK L++G G + SL +++ D E+ R DID+ D Sbjct: 1 MKILIVGTTGMLGYSLFTNLSEHDGYEVFGTVRNILGKEKFFEEYLDNLIFDIDV---ND 57 Query: 42 FASFFL---SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 F+ + PDV+IN + A IN+ IA+ D + I+ Sbjct: 58 FSRLKFAIETIKPDVVINCIGLIKQHDISKQHINAIEINSLLPHKIAQVCDGVSAKLIHF 117 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 STD VF G + I+ P + +IYGKSK GE ++ LRT+ + ++ Sbjct: 118 STDCVFSGKTGKYIEADIP-DATDIYGKSKCLGEVNYGK----HLTLRTSIIGHELNTSV 172 Query: 159 LLSMLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 L L + + F G PT IA +I+ ++ N L G+FH++ D Sbjct: 173 SLIDWFLTQNNKVNGFSKAVFSGLPTC--YIANILIKY---ILPNK--QLNGLFHLSVD 224 >gi|326792042|ref|YP_004309863.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] gi|326542806|gb|ADZ84665.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] Length = 330 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 24/179 (13%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRVGRPD---------------IDLLKPKDFAS 44 MK LV+G G I + ++ + +++I + + +D+ Sbjct: 1 MKILVVGGAGYIGSHAVKQLTENQIDVIVIDSLETGHIESVPSNVPFYQVDIRNKSAVKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 D +I+ AA + V ++ P ++ N G ++ +A G+ I + ST Sbjct: 61 ILEKEKVDGVIHFAANSLVGESMSNPLKYYNNNVGGTESLLEALVETGVKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNF 158 + ++ PI E T P N YG++KLA E+ + ++ NYV LR +++ G++F Sbjct: 121 YGEIATMPITEDMTTCPTNTYGETKLAIEKMLKWTHGAHNLNYVCLR---YFNVAGADF 176 >gi|256111559|ref|ZP_05452554.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 3 str. Ether] gi|265993034|ref|ZP_06105591.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 3 str. Ether] gi|262763904|gb|EEZ09936.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 3 str. Ether] Length = 328 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|254695599|ref|ZP_05157427.1| UDP-glucose 4-epimerase [Brucella abortus bv. 3 str. Tulya] gi|261215999|ref|ZP_05930280.1| UDP-glucose 4-epimerase [Brucella abortus bv. 3 str. Tulya] gi|260917606|gb|EEX84467.1| UDP-glucose 4-epimerase [Brucella abortus bv. 3 str. Tulya] Length = 328 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGECEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|254415758|ref|ZP_05029516.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] gi|196177464|gb|EDX72470.1| NAD dependent epimerase/dehydratase family [Microcoleus chthonoplastes PCC 7420] Length = 325 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 12/124 (9%) Query: 52 DVIINPAAYTAV---DKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGL 107 D +I+ AA + D + E E +N EG + K + G+ ++IS+ L Sbjct: 68 DSVIHLAARVHIWHEDTLDSEAEF-LKVNFEGTANLVKQSIQAGVKHFMFISSIGAMATL 126 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTN-NYVILRTAWVYSIFGSNFLLSML 163 S P+ E SP P YG+SKL E+ ++AS ++ + ILR VY GS +M Sbjct: 127 SDHPLTETSPCQPDTPYGRSKLQAEQALIELASQSSMTWTILRPTLVY---GSGNPGNME 183 Query: 164 RLAK 167 RL K Sbjct: 184 RLIK 187 >gi|159036396|ref|YP_001535649.1| UDP-glucose 4-epimerase [Salinispora arenicola CNS-205] gi|157915231|gb|ABV96658.1| UDP-glucose 4-epimerase [Salinispora arenicola CNS-205] Length = 327 Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 15/144 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PD-IDLLKPKDFASFFLS 48 MK LV G G I ++ M + ++ +R G P+ ++ P D + ++ Sbjct: 1 MKLLVTGGAGFIGSVVTRMLLDAGHEVVVLDDLRTGHQVAVAPEATHVVAPLDDVARVVT 60 Query: 49 FSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +++ AA A ++ PE+ + N G+ A+ +A + G+P ++ ST V+ Sbjct: 61 PEAGFDGVLHFAALIAAGESMVRPELYWHANVVGSLALLEAVRAAGVPKVVFSSTAAVYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKL 129 PI E + T P N YG +KL Sbjct: 121 NPVELPISESAVTAPTNTYGATKL 144 >gi|226364967|ref|YP_002782750.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] gi|226243457|dbj|BAH53805.1| putative UDP-glucose 4-epimerase [Rhodococcus opacus B4] Length = 558 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 27/190 (14%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ + PE + N + +A S G ++ ST + Sbjct: 66 DGVLHFAARSLVGESVETPETYWQANVVKTLTLLEAMRSSGSGRLVFSSTAATYGSPDSV 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LR---TAWVYSIFGSNFL---- 159 PI E +PT P N YG +KLA + + SY + + + LR A Y+ G N + Sbjct: 126 PITEDAPTRPTNPYGATKLAIDHAITSYAHAHGLAACSLRYFNVAGAYAGLGENRVVETH 185 Query: 160 ---LSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQI-----AHNL-IENSDTSLR 208 L + A R EISV FGT PT R I I AH L +E+S Sbjct: 186 LIPLVLQVAAGHRDEISV----FGTDWPTPDGTAVRDYIHIRDLAEAHVLALESSRPGTH 241 Query: 209 GIFHMTADGG 218 I+++ G Sbjct: 242 RIYNLGTGAG 251 >gi|148241258|ref|YP_001226415.1| UDP-glucose 4-epimerase [Synechococcus sp. RCC307] gi|147849568|emb|CAK27062.1| UDP-glucose 4-epimerase [Synechococcus sp. RCC307] Length = 337 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL PK L+ D +++ A AV ++ ++P + + +N G+ + +A + G Sbjct: 59 DLRDPKAVERA-LAHDVDAVVHFAGLKAVGESVEQPLLYWDVNLTGSRVLLEAMTAAGCR 117 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + S+ G+ PI E +P P N YG++K A E+ +A Sbjct: 118 TLVFSSSATVYGIPDHVPIPETAPVQPNNPYGRTKAAVEQMLA 160 >gi|114319325|ref|YP_741008.1| UDP-galactose 4-epimerase [Alkalilimnicola ehrlichii MLHE-1] gi|114225719|gb|ABI55518.1| UDP-galactose 4-epimerase [Alkalilimnicola ehrlichii MLHE-1] Length = 331 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 25/198 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL A + D +++ AA+T V ++ +P + N + +A G+ Sbjct: 50 DLADTAQLAETLARHAFDAVLHFAAHTVVPESLSDPLRYYGNNTRNTWQLLQACHEAGVK 109 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 S+ G+ T P+ E +P P+N YG SK+ E + A+ YV LR Sbjct: 110 RFVFSSTAAVYGMPETMPVAEDAPLAPINPYGASKMMSERMLMDLGAASDLRYVCLRYFN 169 Query: 150 VYSIFGSNFL-------LSMLRLAKE----RRE-ISVVCDQFGTPTSAL--------QIA 189 V S L ++++A E RR+ ++V + TP +A Sbjct: 170 VAGAEPSGRLGQATPQATHLIKVACEAAVGRRDGVTVFGTDYATPDGTCVRDFIHVEDLA 229 Query: 190 RAIIQIAHNLIENSDTSL 207 RA IQ +L++ D+ + Sbjct: 230 RAHIQALSHLVDGGDSQV 247 >gi|302525548|ref|ZP_07277890.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] gi|302434443|gb|EFL06259.1| UDP-glucose 4-epimerase [Streptomyces sp. AA4] Length = 326 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 15/146 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ +P + N + + +A G P ++ ST + + Sbjct: 72 DGVLHFAAKSLVGESMADPAKYWEGNVVTSLRLLEAMKKHGTPRLVFSSTAATYGEPDVS 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFG------SN 157 PI E +PT P N YG +KLA + + S+ + V LR A Y +G ++ Sbjct: 132 PIPETAPTQPTNTYGATKLAIDHAITSFARAHGIAAVSLRYFNVAGAYGAYGERHATETH 191 Query: 158 FLLSMLRLAK-ERREISVVCDQFGTP 182 + +L++A +R IS+ D + TP Sbjct: 192 LIPLVLQVATGDREHISIYGDDYPTP 217 >gi|126178653|ref|YP_001046618.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125861447|gb|ABN56636.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 310 Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V ++ P+ N + +A + G+P ++ ST V+ + Sbjct: 71 DRVYHIAADPDVRQSAVTPDSQIRNNIVATHRVLEAMRAHGVPELVFTSTSTVYGDAAVI 130 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P E ++P P+++YG +KLA E ++SY +++ + T+WVY Sbjct: 131 PTPETYTPLEPISVYGATKLACEALISSYCHSFEM--TSWVY 170 >gi|238926895|ref|ZP_04658655.1| dTDP-glucose 4,6-dehydratase [Selenomonas flueggei ATCC 43531] gi|238885427|gb|EEQ49065.1| dTDP-glucose 4,6-dehydratase [Selenomonas flueggei ATCC 43531] Length = 335 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 SFF PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 SFFEQEHPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSILLDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ PL+ Sbjct: 128 VYGDL---PLDRPDLLFTEETPLH 148 >gi|163760279|ref|ZP_02167362.1| NDP-glucose 4,6-dehydratase [Hoeflea phototrophica DFL-43] gi|162282678|gb|EDQ32966.1| NDP-glucose 4,6-dehydratase [Hoeflea phototrophica DFL-43] Length = 337 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 22/151 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------------DLLKPKDFAS 44 MK ++ G +G + + L+ + D E + + DI D+ +P+D + Sbjct: 1 MKHVIFGGDGFVGRHLAKQLIADGEQVVIA--DIVNENLDFYRDAEIIHCDVTRPEDISK 58 Query: 45 FFLSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 L+ + D++ N +A + + E + +N +G I +A D G ++ +TD Sbjct: 59 VPLT-ADDMVYNLSAKMLSPLQVRAKRHEFFYPVNYDGTKNIIEAMDKAGANRLVHFTTD 117 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ P+ E P PL YG+SKL E Sbjct: 118 MIYGHTLTFPMTEEHPQAPLGEYGQSKLDTE 148 >gi|90962478|ref|YP_536394.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] gi|90821672|gb|ABE00311.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] Length = 330 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + +PD+ +I+ AA++ V ++ +P F N G + + + I Sbjct: 52 LADKDFMRKVFTENPDIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMNEFDIK 111 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E P P+N YG+SKL E+ + +Y +V LR Sbjct: 112 YIVFSSTAATYGIPEKMPIYEDDPQLPINPYGESKLMMEKIMRWADEAYGIKFVALR--- 168 Query: 150 VYSIFG--------------SNFLLSMLRLAK-ERREISVVCDQFGTP 182 +++ G ++ L +L++A ER ++ + D + TP Sbjct: 169 YFNVAGAKPDGSIGEDHHPETHLLPIVLQVAMGEREKLQIFGDDYNTP 216 >gi|148260217|ref|YP_001234344.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] gi|146401898|gb|ABQ30425.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] Length = 351 Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD----SIGIPC------ 95 F + PD++++ AA + VD++ D P N G + +AA ++ P Sbjct: 69 FEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRF 128 Query: 96 IYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK A + V ++ + Y Sbjct: 129 HHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTY 177 >gi|328946030|gb|EGG40176.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK1087] Length = 278 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LANKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADQAYGIKFVALR 183 >gi|219848448|ref|YP_002462881.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219542707|gb|ACL24445.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 346 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKS 127 P++A+ N EG + AAD+ + ++ Y GLS P+ E SP NP ++Y ++ Sbjct: 105 PQVAWRYNFEGTKRVFAAADAAQVERFVFASTYSNYGLSSNGEPVTEDSPLNPQSLYAET 164 Query: 128 KLAGEEKV----ASYTNNYVILRTAWVYSI 153 K+A E+ + T ++ R A ++ I Sbjct: 165 KIAAEQYLRNDTGGATTTPILFRFATLFGI 194 >gi|60418015|dbj|BAD90655.1| polysaccharide synthesis enzyme [Acetobacter tropicalis] Length = 288 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSI 91 + F +F P +++ AA + VD++ D P + N G ++ +A AD Sbjct: 1 MSRLFETFRPHAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSLLEAARKYWLTLDKADRE 60 Query: 92 GIPCIYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK + + V ++ + Y Sbjct: 61 AFRFHHISTDEVFGALEPNDPPFTETTPYDPRSPYSASKASSDHLVRAWFHTY 113 >gi|36958615|gb|AAQ87083.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] Length = 328 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++PD +I+ AA V ++ +P + N G ++ A G+ Sbjct: 54 DILDSAHLIEVIEHYAPDAVIHFAASAYVGESVADPAKYYHNNVCGTLSLLDACRRTGLG 113 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ + PIDE + P+N YG++KL E ++ Y +YV LR Sbjct: 114 KVIFSSSCATYGVPAALPIDEATRQEPINPYGRTKLIAERMLSDYAAAFGLSYVALR 170 >gi|324990821|gb|EGC22756.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK353] Length = 347 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + + Sbjct: 67 LADKDFMRGVFAKHPSIDAVIHFAAFSLVAESMADPLKYFDNNTAGMVSLLEVMQECSVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQKPINPYGESKLMMETIMRWADRAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ +RE I+V D + TP Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDTP 231 >gi|317968541|ref|ZP_07969931.1| UDP-glucose 4-epimerase [Synechococcus sp. CB0205] Length = 342 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ A AV ++ +P + + +N G+ + A + G I S+ GL Sbjct: 79 DAVVHFAGLKAVGESVAKPLLYWDVNVSGSRELLAAMRACGCRTIVFSSSATLYGLPEVV 138 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 PI E +P P+N YG++K A E+ +A + R A Sbjct: 139 PICETAPIKPINPYGQTKAAVEQMLADIATSEAGWRIA 176 >gi|300728275|ref|ZP_07061643.1| Cap5D [Prevotella bryantii B14] gi|299774510|gb|EFI71134.1| Cap5D [Prevotella bryantii B14] Length = 632 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 S F SF PD + + AAY V ED P I N G IA + G+ + ISTD Sbjct: 365 SIFASFRPDYVFHAAAYKHVPMMEDNPCICVQNNVGGTKIIADLSVKYGVKKFVMISTD- 423 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G SK E SY + T +V + FG+ Sbjct: 424 -------------KAVNPTNVMGCSKRICEIYTQSYNK---VSSTEFVTTRFGN 461 >gi|222055228|ref|YP_002537590.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221564517|gb|ACM20489.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 281 Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 23/168 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------------------IDLLKPKDF 42 M+ L++G +G + L E+ R D +D+ + Sbjct: 1 MRILILGGDGMLGHQLLKHLQPRHEVKVTLRQDLGTYSSLGMFTSENAYDGVDVRSLERL 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F P+ IIN E + INA +A IG I++STD Sbjct: 61 VEVLSDFRPEAIINAVGIVKQRPDAKESIPSLEINALLPHRLAVLCKGIGARLIHLSTDC 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 VF G + + E ++ ++YGK+K GE + N + LRT+ + Sbjct: 121 VFSGKKGSYL-ESDLSDAEDLYGKTKFLGE----VHDTNCLTLRTSII 163 >gi|322516421|ref|ZP_08069346.1| UDP-glucose 4-epimerase [Streptococcus vestibularis ATCC 49124] gi|322125154|gb|EFX96547.1| UDP-glucose 4-epimerase [Streptococcus vestibularis ATCC 49124] Length = 186 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L +DF +PDV +I+ AAY+ V ++ ++P F N G + + + + Sbjct: 53 LSDQDFMRKVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNECDVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 I S+ G+ PI E +P P+N YG+SKL E + +Y YV LR Sbjct: 113 YIVFSSTAATYGIPEEIPILEITPQKPINPYGESKLMMETIMKWSDQAYGIKYVPLR 169 >gi|227891754|ref|ZP_04009559.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] gi|227866413|gb|EEJ73834.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] Length = 331 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + + I I S+ G+ Sbjct: 69 DAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLEVMNEFSIDKIVFSSTAATYGIPEEV 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P NP+N YG+SKL E+ + +Y +V LR +++ G Sbjct: 129 PIKETTPQNPINPYGESKLMMEKIMRWADKAYGIKFVPLR---YFNVAGAKPDGSIGEDH 185 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A +R+ + + D + TP Sbjct: 186 MPETHLLPIVLQVAMGKRDKLQIFGDNYNTP 216 >gi|220910530|ref|YP_002485841.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] gi|219867141|gb|ACL47480.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] Length = 350 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 22/160 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKP---------------KDFAS 44 MK LV G G I L+ + +Q E++ V D K KD Sbjct: 1 MKILVTGTEGYIGSLLAPLLMQRGHEVLGV---DTGFYKAGWLYNGTALTAKTLNKDIRQ 57 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 L PDV I++ A + + P+I + IN +G+ +A+ A + GI +Y+S+ Sbjct: 58 ISLEDLPDVDAIVHMAELSNDPTGQLFPQITYEINHQGSVRLAQLAKAAGIRRFVYMSSC 117 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 V+ + + E SP NP Y K K+ E + + ++ Sbjct: 118 SVYGVATGGEVTEASPVNPQTDYAKCKVLVERDLQAMADD 157 >gi|291540687|emb|CBL13798.1| Predicted nucleoside-diphosphate sugar epimerases [Roseburia intestinalis XB6B4] Length = 622 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 48/265 (18%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 ++V PD+DL+ F ++ P++I + AA+ V E+ P A N Sbjct: 338 LKVKFPDLDLVVLIGSVRNTNRMNWIFETYHPEIIYHAAAHKHVPLMEESPNEAIKNNVL 397 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G I +AAD + + ISTD NP NI G SK E + +Y Sbjct: 398 GTWKIVQAADRYHVKRFVMISTD--------------KAVNPTNIMGASKRICEMIIQTY 443 Query: 139 TN----NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL--QIARAI 192 YV +R ++ GSN S++ L K++ E G P + I R Sbjct: 444 NKRSETEYVAVRFG---NVLGSNG--SVIPLFKKQIE-------RGGPVTVTDPNIVRYF 491 Query: 193 IQI--AHNLIENSDTSLRG--IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT 248 + I A +L+ + +G IF + G PV D A+ + S + P + +FT Sbjct: 492 MTIPEAVSLVLQAGAYAKGGEIFVLDM-GEPVKILDLAKNLILLSGHK--PDEDIQIVFT 548 Query: 249 KQYPTKAHRPAYSCLDCSKLANTHN 273 P + +D L +T N Sbjct: 549 GLRPGEKLYEE-MLMDEEGLQDTEN 572 >gi|260893801|ref|YP_003239898.1| NAD-dependent epimerase/dehydratase [Ammonifex degensii KC4] gi|260865942|gb|ACX53048.1| NAD-dependent epimerase/dehydratase [Ammonifex degensii KC4] Length = 310 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVIINPAAYTAV 63 ++ +G + ++C E I G P L L F P+ +I+ AA T Sbjct: 19 LLQRSGHEVAVVDNLCTGRRERIPPGVPFYLLDLASSPLEEPFRCERPEAVIHLAAQTVA 78 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + P N G + +A+ G+ +Y S+ V+ P+DE P PL+ Sbjct: 79 PLSLVRPVADAEANVLGTIRLLEASVKAGVQRIVYTSSAAVYGDPLYLPVDEKHPICPLS 138 Query: 123 IYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 YG SK A E + +Y Y V+LR A VY Sbjct: 139 PYGASKYAAEVYLFTYRRLYGIVPVVLRLANVY 171 >gi|167412395|gb|ABZ79851.1| unknown [Campylobacter jejuni] gi|167412423|gb|ABZ79874.1| unknown [Campylobacter jejuni] Length = 324 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D +++ AA+ V ++ P + N G + A + Sbjct: 52 DLLDIFSLTNVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNIVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TP+DE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPVDEKHPQNPINTYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|291546735|emb|CBL19843.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. SR1/5] Length = 344 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 68 KLFEEEHPDIVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIQRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|325001195|ref|ZP_08122307.1| UDP-glucose 4-epimerase [Pseudonocardia sp. P1] Length = 322 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ ++PE ++ N + + +A +P ++ ST + + Sbjct: 66 DGVLHFAARSLVGESVEKPEKYWNGNVVASFRLLEAIREHAVPRLVFSSTAATYGEPEQV 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +PT P N YG SKLA + + SY + + T+ Y Sbjct: 126 PITETAPTRPTNPYGASKLAIDHMITSYAAAHGLAATSLRY 166 >gi|320102461|ref|YP_004178052.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319749743|gb|ADV61503.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 309 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 27/163 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---------------------P 39 M+ LV G G + +L M ++ +RV +DLLK Sbjct: 1 MRILVTGGAGYVGSTLVPMLLEQGHKVRV----LDLLKFGGHGLLPCCQHRGFELIRGDI 56 Query: 40 KDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 D A+ + D II+ AA + EP++A + N EG + + +Y Sbjct: 57 GDDATVKTAIQGVDAIIHLAAVVGYPACKKEPQVALATNVEGTRTLLRHRVK-SQAFLYA 115 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ST ++ + E +P P+ +YG++K A E+ V N+ Sbjct: 116 STGSIYGTVPDYICREDTPKTPITLYGETKAAAEDMVMEAGNS 158 >gi|307748304|gb|ADN91574.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni M1] Length = 324 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D +++ AA+ V ++ PE + N G + A + Sbjct: 52 DLLDIFSLTNVFKQEKIDALVHFAAFAYVGESVVNPEKYYQNNVVGTINLLNAMLENNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + TPIDE NP+N YG++KL E+ A Y Y + + Y Sbjct: 112 DIVFSSTCATYGEPQYTPIDEKHSQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|301300506|ref|ZP_07206704.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851906|gb|EFK79592.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 330 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + +PD+ +I+ AA++ V ++ +P F N G + + + I Sbjct: 52 LADKDFMRKVFTENPDIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMNEFDIK 111 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E P P+N YG+SKL E+ + +Y +V LR Sbjct: 112 YIVFSSTAATYGIPEKMPIYEDDPQLPINPYGESKLMMEKIMRWADEAYGIKFVALR--- 168 Query: 150 VYSIFG--------------SNFLLSMLRLAK-ERREISVVCDQFGTP 182 +++ G ++ L +L++A ER ++ + D + TP Sbjct: 169 YFNVAGAKPDGSIGEDHHPETHLLPIVLQVAMGEREKLQIFGDDYNTP 216 >gi|327463485|gb|EGF09804.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK1057] Length = 286 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKRY-VSSREDVQVDELDVCGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESVYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRIITKDT 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPNSFYGKSKLAAEQLLAGLESEGFKLAVLRPPMVY 153 >gi|188590600|ref|YP_001920196.1| putative UDP-glucose 4-epimerase [Clostridium botulinum E3 str. Alaska E43] gi|188500881|gb|ACD54017.1| NAD dependent epimerase/dehydratase family [Clostridium botulinum E3 str. Alaska E43] Length = 334 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 74 FSINAE--GAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 F N E G G I ++++ PC +++ST V+D IDE P P++ YG SK+ Sbjct: 112 FGKNGEMDGDGWIVDSSEN-NHPCKVVFMSTCMVYDVADDKGIDENHPAKPISPYGGSKI 170 Query: 130 AGEEKVASYTNNY----VILRTAWVYSIF 154 A E V SY N Y V++R Y F Sbjct: 171 AAENIVLSYYNAYKLPTVVIRPFNTYGPF 199 >gi|150388144|ref|YP_001318193.1| UDP-glucose 4-epimerase [Alkaliphilus metalliredigens QYMF] gi|149948006|gb|ABR46534.1| UDP-glucose 4-epimerase [Alkaliphilus metalliredigens QYMF] Length = 329 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII---------RVGRP------DIDLLKPKDFAS 44 M LV G G I + ++ ++ + VE+I R P DL K A Sbjct: 1 MAVLVCGGAGYIGSHTVLALLKEKVEVIVLDNLSKGHREALPSEVKLYQGDLRDEKLLAG 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F+ D +I+ AA + V ++ + P + N G+ ++ KA G+ ++ ST V Sbjct: 61 IFIDNEIDGVIHFAADSLVGESVEAPLKYYENNVYGSLSLLKAMAKHGVKKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 + PI E S T P N YG++KLA E + ++ +V+LR Sbjct: 121 YGEPREVPIVEESLTLPTNPYGETKLAVERMLKWAQEAHGIEFVVLR 167 >gi|229541582|ref|ZP_04430642.1| UDP-glucose 4-epimerase [Bacillus coagulans 36D1] gi|229326002|gb|EEN91677.1| UDP-glucose 4-epimerase [Bacillus coagulans 36D1] Length = 331 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D II+ AA + V ++ ++P F N G + + +P I + ST + Sbjct: 68 DAIIHFAANSLVGESMEQPLKYFDNNVYGTQIVLEMMKEFHVPHIVFSSTAATYGEPEHV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E PT P N YG++KL E+ + +Y YV LR Sbjct: 128 PITETMPTVPTNTYGETKLTMEKMMKWCEKAYGIKYVALR 167 >gi|167644109|ref|YP_001681772.1| UDP-glucose 4-epimerase [Caulobacter sp. K31] gi|167346539|gb|ABZ69274.1| UDP-glucose 4-epimerase [Caulobacter sp. K31] Length = 324 Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F P +I+ AA+ V + EP ++ N G + +AA G+ ++ ST + Sbjct: 63 FAKHRPVAVIHFAAFIEVGFSVTEPGAFYANNVGGTLTLIEAARRAGVDKLVFSSTCATY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 P+DE P PLN YG+SKL E+ Sbjct: 123 GAPVYVPMDEKHPQAPLNPYGRSKLMVEQ 151 >gi|300214231|gb|ADJ78647.1| UDP-glucose 4-epimerase [Lactobacillus salivarius CECT 5713] Length = 331 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + + I I S+ G+ Sbjct: 69 DAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLEVMNEFSIDKIVFSSTAATYGIPEEV 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P NP+N YG+SKL E+ + +Y +V LR +++ G Sbjct: 129 PIKETTPQNPINPYGESKLMMEKIMRWADKAYGIKFVPLR---YFNVAGAKPDGSIGEDH 185 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A +R+ + + D + TP Sbjct: 186 MPETHLLPIVLQVAMGKRDKLQIFGDDYNTP 216 >gi|284043010|ref|YP_003393350.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283947231|gb|ADB49975.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 312 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 62/250 (24%), Positives = 97/250 (38%), Gaps = 36/250 (14%) Query: 1 MKCLVIGNNG--------QIAQSLSSMCVQDVEIIRVGRPDI------DLLKPKDFASFF 46 M+ LV G +G Q+ + + C D PD D+L P ++ Sbjct: 1 MRVLVTGGSGFIGSHVVDQLHAAGHTPCSFDRRPSPFHAPDEVETVIGDILDPAALSAAM 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF- 104 D +++ AA V + +P A ++N+ G + +AA I +Y ST +V+ Sbjct: 61 EGC--DAVLHLAAAADVGEVAKDPAGAEALNSRGTFNVLEAARGQAIEHVLYASTIWVYS 118 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI--------------LRTAWV 150 DG SR ++ P ++Y +KLAGE SY Y + R A V Sbjct: 119 DGASRRVDEDEQLALPSHLYTATKLAGEAYCRSYAALYGVRTTILRFGIPYGPRARPAAV 178 Query: 151 YSIFGSNFL----LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 F L L++ + R V D ALQ R +NL+ + D S Sbjct: 179 VPAFVERALAGEPLTIAGDGAQSRRFVYVEDLAEGAVRALQPCREDSCRVYNLVSDRDVS 238 Query: 207 LRGIFHMTAD 216 +R I + D Sbjct: 239 IREIAEVVRD 248 >gi|227891470|ref|ZP_04009275.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] gi|227866617|gb|EEJ74038.1| UDP-glucose 4-epimerase [Lactobacillus salivarius ATCC 11741] Length = 330 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + +PD+ +I+ AA++ V ++ +P F N G + + + I Sbjct: 52 LADKDFMRKVFTENPDIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMNEFDIK 111 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E P P+N YG+SKL E+ + +Y +V LR Sbjct: 112 YIVFSSTAATYGIPEKMPIYEDDPQLPINPYGESKLMMEKIMRWADEAYGIKFVALR--- 168 Query: 150 VYSIFG--------------SNFLLSMLRLAK-ERREISVVCDQFGTP 182 +++ G ++ L +L++A ER ++ + D + TP Sbjct: 169 YFNVAGAKPDGSIGEDHHPETHLLPIVLQVAMGEREKLQIFGDDYNTP 216 >gi|227820019|ref|YP_002823990.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] gi|227339018|gb|ACP23237.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] Length = 327 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++PD +I+ AA V ++ +P + N G ++ A G+ Sbjct: 53 DILDSAHLIEVIEHYAPDAVIHFAASAYVGESVADPAKYYHNNVCGTLSLLDACRRTGLG 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + S+ G+ + PIDE + P+N YG++KL E ++ Y +YV LR Sbjct: 113 KVIFSSSCATYGVPAALPIDEATRQEPINPYGRTKLIAERMLSDYAAAFGLSYVALR 169 >gi|196230981|ref|ZP_03129841.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] gi|196224811|gb|EDY19321.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] Length = 292 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 13/173 (7%) Query: 5 VIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA- 62 ++G +G + + + Q V + R D+D + P ++N A YT Sbjct: 7 ILGASGYVGGAYQRLLESQGVPFRALPRTDLDYYNVDTLTAALKEAKPAFLVNCAGYTGK 66 Query: 63 --VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-------DGLSRTPID 113 VD E NA G + +A ++ G P ++S+ +F GL T Sbjct: 67 PNVDACELHKTECLLGNAILPGVLRQACEATGTPWGHVSSGCIFTGRRPDGGGLRETDAP 126 Query: 114 EFS-PTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSNFLLSMLR 164 FS TN + Y SK GEE +A N ++ LR + N+L ++R Sbjct: 127 NFSFRTNNCSFYSGSKALGEEVLAGADNCFIWRLRIPFNEVDSPRNYLTKLMR 179 >gi|157694215|ref|YP_001488677.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] gi|157682973|gb|ABV64117.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] Length = 330 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + + +++ AA + V ++ +P + N GA A+ + + + Sbjct: 51 DLRDHAFLRQVFKTHQIEAVMHFAADSLVGESVTDPLKYYDNNVGGATALLQVMNEFDVK 110 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 I + ST + R PI E TNP N YG++KLA E+ + +Y YV+LR Sbjct: 111 HIVFSSTAAAYGEPKRVPIVETDETNPTNPYGETKLAIEKMLKWSEEAYGIEYVVLR 167 >gi|194334552|ref|YP_002016412.1| NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] gi|194312370|gb|ACF46765.1| NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A D G+ I ++ GL++ DE P +P N YGKSK Sbjct: 77 LYYDVNVQGTKNVLDAMDRKGLRSIVFTSSVAVYGLNKENPDEEHPADPFNHYGKSKWKA 136 Query: 132 EE 133 EE Sbjct: 137 EE 138 >gi|326403403|ref|YP_004283484.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325050264|dbj|BAJ80602.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 356 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD----SIGIPC------ 95 F + PD++++ AA + VD++ D P N G + +AA ++ P Sbjct: 74 FEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRF 133 Query: 96 IYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK A + V ++ + Y Sbjct: 134 HHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTY 182 >gi|254699787|ref|ZP_05161615.1| UDP-glucose 4-epimerase [Brucella suis bv. 5 str. 513] gi|261750257|ref|ZP_05993966.1| UDP-glucose 4-epimerase [Brucella suis bv. 5 str. 513] gi|261740010|gb|EEY27936.1| UDP-glucose 4-epimerase [Brucella suis bv. 5 str. 513] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|253566802|ref|ZP_04844254.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251944365|gb|EES84854.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N + + + P+ A INA + K +D +G I+ISTD VF G + Sbjct: 64 PDFILNCIG-VLIRGSREHPDNAILINAWFPHLLKKLSDEVGAKLIHISTDCVFSG-KKG 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 E + ++YG+SK GE Sbjct: 122 NYSETDIRDADDVYGRSKALGE 143 >gi|125654613|ref|YP_001033807.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides 2.4.1] gi|77386273|gb|ABA81702.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides 2.4.1] Length = 346 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + A F + PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DIRDAEAMARIFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYWVG 116 Query: 92 -----GIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD VF L T E +P P + Y SK A + V ++ Y Sbjct: 117 QGKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETY 173 >gi|254303314|ref|ZP_04970672.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323506|gb|EDK88756.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 327 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 43/249 (17%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 + G N +I ++L ++VE + DID + F +F +I+ AA + Sbjct: 27 VVAFGRNEKIGKTLID---KNVEFFK---GDID-----NLDDLFKAFQDCSAVIHAAALS 75 Query: 62 AV-DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSP 117 V + ED +++N G + + + + +++S+ ++ G DE Sbjct: 76 TVWGRWED----FYNVNVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPK 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--------- 168 N LN Y KSK+ E + S NY+I+R ++ I ++ + +L L K+ Sbjct: 132 ENDLNYYIKSKIMAENIIKSSKLNYMIIRPRGLFGIGDTSIIPRLLELNKKIGIPLFVDG 191 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 ++++ + C + AL++A +EN+ S R I+++T D P+ + Sbjct: 192 KQKVDITCVE--NVAYALRLA----------LENNQYS-RQIYNITND-EPIEFKKILTL 237 Query: 229 IFWESAERG 237 F E G Sbjct: 238 FFNEIGTEG 246 >gi|327401553|ref|YP_004342392.1| UDP-glucose 4-epimerase [Archaeoglobus veneficus SNP6] gi|327317061|gb|AEA47677.1| UDP-glucose 4-epimerase [Archaeoglobus veneficus SNP6] Length = 306 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AA V + P+ + N + +A +G+ I ++ G + TP E P Sbjct: 72 AANPDVRIGSENPQAIYDNNVLATYRLLEAMRKVGVGRIVFTSTSTVYGEAPTPTPEDYP 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 T P++IYG SK+A E +ASY + + + +W+Y Sbjct: 132 TIPISIYGASKVACEALIASYCHTFEM--QSWIY 163 >gi|300114910|ref|YP_003761485.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus watsonii C-113] gi|299540847|gb|ADJ29164.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus watsonii C-113] Length = 358 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ + + A F + P+ +++ AA + VD++ D P N G + +AA Sbjct: 61 DICQRESMAQIFARYQPEAVLHLAAESHVDRSIDSPAAFIDTNVTGTYILLEAALEYWRK 120 Query: 89 ----DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++STD VF L T + E SP P + Y SK A + V ++ + Y Sbjct: 121 LAKSAQARFRFHHVSTDEVFGSLGATGLFREDSPYQPNSPYAASKAASDHLVRAWHHTY 179 >gi|281355249|ref|ZP_06241743.1| UDP-glucose 4-epimerase [Victivallis vadensis ATCC BAA-548] gi|281318129|gb|EFB02149.1| UDP-glucose 4-epimerase [Victivallis vadensis ATCC BAA-548] Length = 324 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 13/108 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N +A AA G+ ++ ST F Sbjct: 69 DAIMHFAAFSLVGESMKDPSKYFRNNIANGINLADAAVESGVKMFVFSSTAATFGQPESI 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 PI EF P+N YG+SKL E+ IL+ W + I+G N+ Sbjct: 129 PIKEFDRQIPINPYGESKLCFEK----------ILK--WYHEIYGINY 164 >gi|256157771|ref|ZP_05455689.1| UDP-glucose 4-epimerase [Brucella ceti M490/95/1] gi|256253261|ref|ZP_05458797.1| UDP-glucose 4-epimerase [Brucella ceti B1/94] gi|261220377|ref|ZP_05934658.1| UDP-glucose 4-epimerase [Brucella ceti B1/94] gi|265996274|ref|ZP_06108831.1| UDP-glucose 4-epimerase [Brucella ceti M490/95/1] gi|260918961|gb|EEX85614.1| UDP-glucose 4-epimerase [Brucella ceti B1/94] gi|262550571|gb|EEZ06732.1| UDP-glucose 4-epimerase [Brucella ceti M490/95/1] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|330991299|ref|ZP_08315250.1| dTDP-glucose 4-6-dehydratase 1 [Gluconacetobacter sp. SXCC-1] gi|329761318|gb|EGG77811.1| dTDP-glucose 4-6-dehydratase 1 [Gluconacetobacter sp. SXCC-1] Length = 336 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---- 91 +L F + PD +++ AA + VD++ D P + N G + +AA Sbjct: 44 ILDATAMQHLFETHQPDAVMHLAAESHVDRSIDGPGVFMQTNVMGTYTLLEAAHRYWKGL 103 Query: 92 ------GIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L P E +P +P + Y SK A + V ++ + Y Sbjct: 104 DGNRRKAFRFHHISTDEVFGHLELGDPPFTETTPYDPRSPYSASKAASDHIVRAWYHTY 162 >gi|303325447|ref|ZP_07355890.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] gi|302863363|gb|EFL86294.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] Length = 325 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSR 109 D + N A T+ + +P INA+ +I +A A + G+ ++ T ++ Sbjct: 77 DFLFNLAGQTSHMDSMSDPFTDLEINAKAQLSILEACRAHNPGVKIVFAGTRQIYGRPDH 136 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 P+DE P P++I G K+AGE Y N Y + T Sbjct: 137 LPVDEDHPIRPVDINGIHKVAGEWYHLLYNNVYGLRST 174 >gi|241708787|ref|XP_002413344.1| dtdp-glucose 4-6-dehydratase, putative [Ixodes scapularis] gi|215507158|gb|EEC16652.1| dtdp-glucose 4-6-dehydratase, putative [Ixodes scapularis] Length = 377 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA +PE+A S+N G + ++ +Y ST + + Sbjct: 132 DTVVHLAAVVGYPACSRDPELAMSVNVHGTQVLLRSLQP-HQRLVYASTGSCYGAVPEGL 190 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 E +P +PL++YG++K E V V LR A V+ + Sbjct: 191 CTEETPISPLSLYGRTKAEAERDV--LDRGGVALRLATVFGV 230 >gi|261409577|ref|YP_003245818.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] gi|261286040|gb|ACX68011.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] Length = 341 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ + F +V++N AA + VD++ EPE+ + N G + AA + Sbjct: 59 DIANKEAVEQIFEQHQIEVVVNFAAESHVDRSILEPEVFVNTNVLGTQVLLDAAKKHNVT 118 Query: 94 PCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L T + E +P P + Y SK G+ V +Y + Sbjct: 119 KFVQVSTDEVYGSLGETGLFTEETPLAPNSPYSASKAGGDLLVRAYHETF 168 >gi|260435778|ref|ZP_05789748.1| UDP-glucose 4-epimerase [Synechococcus sp. WH 8109] gi|260413652|gb|EEX06948.1| UDP-glucose 4-epimerase [Synechococcus sp. WH 8109] Length = 353 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +I+ A AV ++ ++P + + +N G+ + A D+ + S+ G T Sbjct: 87 DAVIHFAGLKAVGESVEKPLLYWDVNVSGSRTLLAAMDAHACRTLVFSSSATVYGYPETV 146 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG SK A E+ +A Sbjct: 147 PIPESAPIHPINPYGFSKAAVEQMLA 172 >gi|17989075|ref|NP_541708.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|256043432|ref|ZP_05446365.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. Rev.1] gi|260564637|ref|ZP_05835122.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|265989858|ref|ZP_06102415.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. Rev.1] gi|17984919|gb|AAL53972.1| udp-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|260152280|gb|EEW87373.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. 16M] gi|263000527|gb|EEZ13217.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 1 str. Rev.1] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|326402836|ref|YP_004282917.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325049697|dbj|BAJ80035.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 331 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD----SIGIPC------ 95 F + PD++++ AA + VD++ D P N G + +AA ++ P Sbjct: 49 FEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRF 108 Query: 96 IYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK A + V ++ + Y Sbjct: 109 HHISTDEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTY 157 >gi|303254624|ref|ZP_07340726.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS455] gi|303258813|ref|ZP_07344793.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP-BS293] gi|303261975|ref|ZP_07347921.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP14-BS292] gi|303263838|ref|ZP_07349760.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS397] gi|303265627|ref|ZP_07351526.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS457] gi|303268736|ref|ZP_07354525.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS458] gi|301802559|emb|CBW35320.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae INV200] gi|302598336|gb|EFL65380.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS455] gi|302637058|gb|EFL67547.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP14-BS292] gi|302640314|gb|EFL70769.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP-BS293] gi|302641692|gb|EFL72050.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS458] gi|302644754|gb|EFL75002.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS457] gi|302646876|gb|EFL77101.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae BS397] Length = 233 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|254431537|ref|ZP_05045240.1| dTDP-glucose 4,6-dehydratase [Cyanobium sp. PCC 7001] gi|197625990|gb|EDY38549.1| dTDP-glucose 4,6-dehydratase [Cyanobium sp. PCC 7001] Length = 367 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--- 90 +DL P+ A+ PD++++ AA + VD++ + P + N G + +A + Sbjct: 74 VDLTDPEATAAAVRQADPDLVMHLAAESHVDRSIEGPGAFIASNVSGTFHLLQAVRAHHE 133 Query: 91 -------IGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L T E +P +P + Y SK A + V+++ + Y Sbjct: 134 GLNEGRRAAFRFHHISTDEVFGSLGETGRFSETTPYDPRSPYSASKAASDHLVSAWHHTY 193 >gi|218960972|ref|YP_001740747.1| NAD-dependent epimerase/dehydratase family protein [Candidatus Cloacamonas acidaminovorans] gi|167729629|emb|CAO80541.1| NAD-dependent epimerase/dehydratase family protein [Candidatus Cloacamonas acidaminovorans] Length = 325 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRT 110 DVI + AA A+ + PE N +G I +AA G+ I + ST V+ Sbjct: 72 DVIFHLAALIAIPYSYIAPESYIETNVKGTLNICQAAKDNGVKRILVTSTSEVYGTAQYV 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+ + S+ N++ Sbjct: 132 PIDEKHPLQPQSPYSASKIGADAIAMSFYNSF 163 >gi|146302959|ref|YP_001190275.1| NAD-dependent epimerase/dehydratase [Metallosphaera sedula DSM 5348] gi|145701209|gb|ABP94351.1| NAD-dependent epimerase/dehydratase [Metallosphaera sedula DSM 5348] Length = 306 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%) Query: 56 NPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 NP T+++ E+ E ++ ++NA + A S I+ S+ V+ G ++TP Sbjct: 69 NPDVRTSMENIEEHFERDVKATLNA-----LESARKSDCKFFIFFSSSTVY-GEAKTPTP 122 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 E + TNP++ YG KL GEE Y+ NY I Sbjct: 123 ETAETNPISNYGLFKLMGEEMTRFYSQNYGI 153 >gi|23500290|ref|NP_699730.1| UDP-glucose 4-epimerase [Brucella suis 1330] gi|62317594|ref|YP_223447.1| GalE-2, UDP-glucose 4-epimerase [Brucella abortus bv. 1 str. 9-941] gi|83269577|ref|YP_418868.1| NAD-dependent epimerase/dehydratase [Brucella melitensis biovar Abortus 2308] gi|161620606|ref|YP_001594492.1| UDP-glucose 4-epimerase [Brucella canis ATCC 23365] gi|189022849|ref|YP_001932590.1| UDP-glucose 4-epimerase [Brucella abortus S19] gi|225628977|ref|ZP_03787011.1| UDP-glucose 4-epimerase [Brucella ceti str. Cudo] gi|237817145|ref|ZP_04596137.1| UDP-glucose 4-epimerase [Brucella abortus str. 2308 A] gi|254691094|ref|ZP_05154348.1| UDP-glucose 4-epimerase [Brucella abortus bv. 6 str. 870] gi|254698879|ref|ZP_05160707.1| UDP-glucose 4-epimerase [Brucella abortus bv. 2 str. 86/8/59] gi|254702921|ref|ZP_05164749.1| UDP-glucose 4-epimerase [Brucella suis bv. 3 str. 686] gi|254705957|ref|ZP_05167785.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M163/99/10] gi|254711743|ref|ZP_05173554.1| UDP-glucose 4-epimerase [Brucella pinnipedialis B2/94] gi|254712357|ref|ZP_05174168.1| UDP-glucose 4-epimerase [Brucella ceti M644/93/1] gi|254715429|ref|ZP_05177240.1| UDP-glucose 4-epimerase [Brucella ceti M13/05/1] gi|254732325|ref|ZP_05190903.1| UDP-glucose 4-epimerase [Brucella abortus bv. 4 str. 292] gi|256015322|ref|YP_003105331.1| UDP-glucose 4-epimerase [Brucella microti CCM 4915] gi|256029625|ref|ZP_05443239.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M292/94/1] gi|256059257|ref|ZP_05449462.1| UDP-glucose 4-epimerase [Brucella neotomae 5K33] gi|256256280|ref|ZP_05461816.1| UDP-glucose 4-epimerase [Brucella abortus bv. 9 str. C68] gi|260167287|ref|ZP_05754098.1| UDP-glucose 4-epimerase [Brucella sp. F5/99] gi|260544832|ref|ZP_05820653.1| UDP-glucose 4-epimerase [Brucella abortus NCTC 8038] gi|260568166|ref|ZP_05838635.1| UDP-glucose 4-epimerase [Brucella suis bv. 4 str. 40] gi|260756689|ref|ZP_05869037.1| UDP-glucose 4-epimerase [Brucella abortus bv. 6 str. 870] gi|260760120|ref|ZP_05872468.1| UDP-glucose 4-epimerase [Brucella abortus bv. 4 str. 292] gi|260763358|ref|ZP_05875690.1| UDP-glucose 4-epimerase [Brucella abortus bv. 2 str. 86/8/59] gi|260882506|ref|ZP_05894120.1| UDP-glucose 4-epimerase [Brucella abortus bv. 9 str. C68] gi|261217163|ref|ZP_05931444.1| UDP-glucose 4-epimerase [Brucella ceti M13/05/1] gi|261313388|ref|ZP_05952585.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M163/99/10] gi|261319374|ref|ZP_05958571.1| UDP-glucose 4-epimerase [Brucella pinnipedialis B2/94] gi|261320034|ref|ZP_05959231.1| UDP-glucose 4-epimerase [Brucella ceti M644/93/1] gi|261323209|ref|ZP_05962406.1| UDP-glucose 4-epimerase [Brucella neotomae 5K33] gi|261753529|ref|ZP_05997238.1| UDP-glucose 4-epimerase [Brucella suis bv. 3 str. 686] gi|261756699|ref|ZP_06000408.1| UDP-glucose 4-epimerase [Brucella sp. F5/99] gi|265986626|ref|ZP_06099183.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M292/94/1] gi|297249637|ref|ZP_06933338.1| UDP-glucose 4-epimerase [Brucella abortus bv. 5 str. B3196] gi|23463900|gb|AAN33735.1| UDP-glucose 4-epimerase [Brucella suis 1330] gi|62197787|gb|AAX76086.1| GalE-2, UDP-glucose 4-epimerase [Brucella abortus bv. 1 str. 9-941] gi|82939851|emb|CAJ12860.1| NAD binding site:NAD-dependent epimerase/dehydratase:UDP-glucose 4-epimerase [Brucella melitensis biovar Abortus 2308] gi|161337417|gb|ABX63721.1| UDP-glucose 4-epimerase [Brucella canis ATCC 23365] gi|189021423|gb|ACD74144.1| UDP-glucose 4-epimerase [Brucella abortus S19] gi|225616823|gb|EEH13871.1| UDP-glucose 4-epimerase [Brucella ceti str. Cudo] gi|237787958|gb|EEP62174.1| UDP-glucose 4-epimerase [Brucella abortus str. 2308 A] gi|255997982|gb|ACU49669.1| UDP-glucose 4-epimerase [Brucella microti CCM 4915] gi|260098103|gb|EEW81977.1| UDP-glucose 4-epimerase [Brucella abortus NCTC 8038] gi|260154831|gb|EEW89912.1| UDP-glucose 4-epimerase [Brucella suis bv. 4 str. 40] gi|260670438|gb|EEX57378.1| UDP-glucose 4-epimerase [Brucella abortus bv. 4 str. 292] gi|260673779|gb|EEX60600.1| UDP-glucose 4-epimerase [Brucella abortus bv. 2 str. 86/8/59] gi|260676797|gb|EEX63618.1| UDP-glucose 4-epimerase [Brucella abortus bv. 6 str. 870] gi|260872034|gb|EEX79103.1| UDP-glucose 4-epimerase [Brucella abortus bv. 9 str. C68] gi|260922252|gb|EEX88820.1| UDP-glucose 4-epimerase [Brucella ceti M13/05/1] gi|261292724|gb|EEX96220.1| UDP-glucose 4-epimerase [Brucella ceti M644/93/1] gi|261298597|gb|EEY02094.1| UDP-glucose 4-epimerase [Brucella pinnipedialis B2/94] gi|261299189|gb|EEY02686.1| UDP-glucose 4-epimerase [Brucella neotomae 5K33] gi|261302414|gb|EEY05911.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M163/99/10] gi|261736683|gb|EEY24679.1| UDP-glucose 4-epimerase [Brucella sp. F5/99] gi|261743282|gb|EEY31208.1| UDP-glucose 4-epimerase [Brucella suis bv. 3 str. 686] gi|264658823|gb|EEZ29084.1| UDP-glucose 4-epimerase [Brucella pinnipedialis M292/94/1] gi|297173506|gb|EFH32870.1| UDP-glucose 4-epimerase [Brucella abortus bv. 5 str. B3196] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|145350279|ref|XP_001419540.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579772|gb|ABO97833.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 347 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 GN G + ++L M + +R R D+ +++ D A + D + + AA V ++ Sbjct: 45 GNAGAV-EALRRMAPKGS--LRAVRGDLGVVEDVDAAFGNTNMPVDAVFHFAAIAYVGES 101 Query: 67 EDEPEIAFS---INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +P +S N + +A D + IY ST + + + PI E +PT P+N Sbjct: 102 MADPVRYYSNITTNTVNLLRVMQAKDVRKM--IYSSTCATYGNVEKLPITESTPTRPINP 159 Query: 124 YGKSKLAGEEKVASY 138 YGKSKL E + Y Sbjct: 160 YGKSKLYAENAIKDY 174 >gi|288800362|ref|ZP_06405820.1| NAD dependent epimerase/reductase-related protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332575|gb|EFC71055.1| NAD dependent epimerase/reductase-related protein [Prevotella sp. oral taxon 299 str. F0039] Length = 342 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 13/133 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R+ ++DL + + + D +I+ A T +D F +N EG + A Sbjct: 55 RIRFIELDLSNEETLKKQLANTTFDYVIHAAGATKCINKDD----FFKVNTEGTKNLVNA 110 Query: 88 ADSIGIPC---IYISTDYVFDGL-SRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTN 140 ++ +P I+IS+ V+ + + P E T+ P Y +SKLA EE + S N Sbjct: 111 LIALKMPLKRFIFISSLSVYGPVHEQQPYKEICETDVPVPNTAYAESKLAAEEYINSIGN 170 Query: 141 N--YVILRTAWVY 151 N Y+ILR VY Sbjct: 171 NFPYIILRPTGVY 183 >gi|255261298|ref|ZP_05340640.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255263265|ref|ZP_05342607.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255103633|gb|EET46307.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] gi|255105600|gb|EET48274.1| UDP-glucose 4-epimerase [Thalassiobium sp. R2A62] Length = 327 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL F ++ P+ +++ AA + V ++ P + N G+ + +AA + G Sbjct: 51 DLLDRAALDQVFAAYQPEAVMHFAALSQVGESMVHPGKYWRNNVVGSLTLIEAAVAAGCN 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ ST + +DE P +P+N YG SK A E+ +A+Y Sbjct: 111 RFVFSSTCATYGDQDNVLLDENCPQDPINAYGASKRAIEDILANY 155 >gi|296137820|ref|YP_003645063.1| NAD-dependent epimerase/dehydratase [Tsukamurella paurometabola DSM 20162] gi|296025954|gb|ADG76724.1| NAD-dependent epimerase/dehydratase [Tsukamurella paurometabola DSM 20162] Length = 338 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 42/224 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--------- 51 MK LV G+ G + + V +++ D+ L FA L +P Sbjct: 1 MKVLVTGHQGYLGTVM-------VPLLQAEGHDVVGLDSGLFADCTLGATPPEPPDIAVD 53 Query: 52 ------------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 D +I+ AA + +P+I + IN + +A+ A G+ +Y Sbjct: 54 LRDVTEEQLAGFDAVIHLAALSNDPLGALDPQITYDINHHASSRLARLAKQAGVARFLYA 113 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYS--- 152 ST V+ +DE +P PL Y +SK+ E+ A+ ++ V LR A + Sbjct: 114 STCSVYGAAGDGLVDEDAPLRPLTPYAESKVRVEDDAAAIADSGFAPVFLRNATAFGFSP 173 Query: 153 -IFGSNFLLSMLRLAKERREISVVCDQFGTP----TSALQIARA 191 + L +++ A E+ V+ D GTP A IARA Sbjct: 174 RLRADIVLNNLVGYATLTGEVKVLSD--GTPWRPLVHAQDIARA 215 >gi|225686334|ref|YP_002734306.1| UDP-glucose 4-epimerase [Brucella melitensis ATCC 23457] gi|256262530|ref|ZP_05465062.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 2 str. 63/9] gi|225642439|gb|ACO02352.1| UDP-glucose 4-epimerase [Brucella melitensis ATCC 23457] gi|263092308|gb|EEZ16561.1| UDP-glucose 4-epimerase [Brucella melitensis bv. 2 str. 63/9] gi|326410698|gb|ADZ67762.1| UDP-glucose 4-epimerase [Brucella melitensis M28] gi|326553990|gb|ADZ88629.1| UDP-glucose 4-epimerase [Brucella melitensis M5-90] Length = 328 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|187469770|gb|AAI66991.1| Tgds protein [Rattus norvegicus] Length = 227 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 IY+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 10 IYVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVY 69 >gi|126464816|ref|YP_001041792.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332561400|ref|ZP_08415715.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides WS8N] gi|126106631|gb|ABN79156.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides ATCC 17029] gi|332274199|gb|EGJ19516.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides WS8N] Length = 346 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + A F + PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DIRDAEAMARVFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYWVG 116 Query: 92 -----GIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD VF L T E +P P + Y SK A + V ++ Y Sbjct: 117 QGRPEGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETY 173 >gi|90961359|ref|YP_535275.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] gi|90820553|gb|ABD99192.1| UDP-glucose 4-epimerase [Lactobacillus salivarius UCC118] Length = 331 Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + + I I S+ G+ Sbjct: 69 DAVIHFAAYSLVAESMKKPLKYFDNNTAGMVKLLEVMNEFSIDKIVFSSTAATYGIPEEV 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E +P NP+N YG+SKL E+ + +Y +V LR +++ G Sbjct: 129 PIKETTPQNPINPYGESKLMMEKIMRWADEAYGIKFVPLR---YFNVAGAKPDGSIGEDH 185 Query: 156 ---SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ L +L++A +R+ + + D + TP Sbjct: 186 MPETHLLPIVLQVAMGKRDKLQIFGDDYNTP 216 >gi|319646515|ref|ZP_08000744.1| hypothetical protein HMPREF1012_01780 [Bacillus sp. BT1B_CT2] gi|317391103|gb|EFV71901.1| hypothetical protein HMPREF1012_01780 [Bacillus sp. BT1B_CT2] Length = 328 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA + V ++ ++PEI F N + A + A G+ ++ ST V+ + Sbjct: 68 DAVIHFAAKSLVSESIEKPEIYFRENTLKSCAFFETAIKEGVNNIVFSSTAAVYGIPEKA 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P +P+N YG+SKL E+ Sbjct: 128 PIKEAAPLSPVNPYGESKLMIEK 150 >gi|83719796|ref|YP_442027.1| epimerase/dehydratase [Burkholderia thailandensis E264] gi|83653621|gb|ABC37684.1| epimerase/dehydratase [Burkholderia thailandensis E264] Length = 332 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 28/188 (14%) Query: 48 SFSPDVIINPAAYTAV--DKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYIST-DY 102 S DV+++ AA V D+ D P+ AF N +A+AA G +++S+ Sbjct: 64 SLQADVVVHLAARVHVMRDRVLD-PDTAFRTSNVAATLRVARAARQQGARRFVFLSSIKA 122 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNF 158 + + P+ E S P + YG+SKL E + + + VI+R VY Sbjct: 123 IAEADGGAPLREDSIPAPQDAYGRSKLEAERALEQLRDGASFDTVIIRPPLVYGPEVRAN 182 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAII-------QIAHNLIENSDTSLRGIF 211 LS++R V P A++ R+++ + H IE + +++G F Sbjct: 183 FLSLMR---------AVAQGVPLPLGAVRARRSMVYVDNLADAVMHCAIEPA--AMQGCF 231 Query: 212 HMTADGGP 219 H+ DG P Sbjct: 232 HVADDGAP 239 >gi|146280069|ref|YP_001170226.1| hypothetical protein Rsph17025_4069 [Rhodobacter sphaeroides ATCC 17025] gi|145558310|gb|ABP72921.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] Length = 363 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PI 112 +++ A +V+++ ++P + F+ N GA ++ A + G+ + S+ G + T P+ Sbjct: 79 VVHLAGRKSVNESAEDPLLYFAENLSGAVSLMTAMRNCGVSRLVFSSSATVYGAAETLPV 138 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV 135 DE +PT + YG++KL EE + Sbjct: 139 DETAPTRVTSPYGRTKLMIEEMI 161 >gi|221634576|ref|YP_002523264.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides KD131] gi|221163449|gb|ACM04411.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sphaeroides KD131] Length = 346 Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + A F + PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DIRDAEAMARVFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYWVG 116 Query: 92 -----GIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD VF L T E +P P + Y SK A + V ++ Y Sbjct: 117 QGKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETY 173 >gi|182684810|ref|YP_001836557.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae CGSP14] gi|182630144|gb|ACB91092.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae CGSP14] gi|332201278|gb|EGJ15349.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA47901] Length = 233 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|167903934|ref|ZP_02491139.1| NAD-dependent epimerase/dehydratase [Burkholderia pseudomallei NCTC 13177] gi|217421096|ref|ZP_03452601.1| putative epimerase/dehydratase WbiG [Burkholderia pseudomallei 576] gi|217396508|gb|EEC36525.1| putative epimerase/dehydratase WbiG [Burkholderia pseudomallei 576] Length = 319 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 39/245 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRPDID-------LLKPKDFASFFLSFSP- 51 + +V G NG + +++S + ++ V RP L +DFA P Sbjct: 3 RVIVTGANGFVGRAVSRALIAGGHVVTGLVRRPGACVEGVWEWLYDGQDFAGLDGEVWPE 62 Query: 52 -DVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF--- 104 D +++ AA + D A D + + N +G +A+AA G+ +++S+ Sbjct: 63 TDCVVHLAARAHMLNDTAADLDAVYRATNVDGTLRVAEAARRNGVRRFVFVSSIKALAET 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI-FGSNFL 159 DG S P+ E P P + YG+SK E+ + + + + VI+R VY +NFL Sbjct: 123 DGGS--PLGEQDPARPEDAYGRSKREAEQVLRQFADSSGLDVVIVRPPLVYGPEVRANFL 180 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH--NLIENSDTSLR---GIFHMT 214 R + V P A+ R+++ I + + I + T R G FH+ Sbjct: 181 ----------RMMDAVWRGVPLPLGAISARRSLVYIDNLADAILHCATDPRAAHGCFHVA 230 Query: 215 ADGGP 219 D P Sbjct: 231 DDDAP 235 >gi|18312971|ref|NP_559638.1| UDP-glucose 4-epimerase (galE-1) [Pyrobaculum aerophilum str. IM2] gi|18160469|gb|AAL63820.1| UDP-glucose 4-epimerase (galE-1) [Pyrobaculum aerophilum str. IM2] Length = 314 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 LK D+ + DV+ + AA V + EP + F+ N + + A G+ Sbjct: 52 LKESDWG---VGIRGDVVFHFAANPEVRLSTTEPVVHFNENVLATFNVLEWARQTGVKSV 108 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ S+ V+ P E +P P+++YG +K AGE A+Y Y Sbjct: 109 IFASSSTVYGDAEVIPTPEEAPYKPISVYGAAKAAGEVMCATYARLY 155 >gi|90425660|ref|YP_534030.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB18] gi|90107674|gb|ABD89711.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB18] Length = 344 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 13/121 (10%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDK--AEDEPEIAFSINA-----EGA----G 82 +D+ A F + P +I+ AA + VD+ A P I +IN E A G Sbjct: 59 LDICDAAAMAGVFATHQPRGVIHLAAESHVDRSIASAAPFITTNINGTFVLLEAARAYHG 118 Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 A+A AAD G ++STD V+ L T + E +P +P + Y SK A + V ++ + Sbjct: 119 ALA-AADRDGFKFHHVSTDEVYGALGETGVFKEDTPYSPNSPYSASKAASDHLVNAWLHT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|312868235|ref|ZP_07728435.1| NAD dependent epimerase/dehydratase family protein [Streptococcus parasanguinis F0405] gi|311095980|gb|EFQ54224.1| NAD dependent epimerase/dehydratase family protein [Streptococcus parasanguinis F0405] Length = 332 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D II+ A+ + +IA+ IN G + + A G+ ++ G + Sbjct: 72 DTIIHLASLVGEPSCVVDKDIAYDINVRGTRNLVECAVKKGVKNFIFASSCSVYGFGKDK 131 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSI 153 DE S NP++ Y + KL E+ + +Y + N +ILR V+ + Sbjct: 132 FDEHSIPNPVDYYAELKLLSEKDLLNYKDKLNIIILRFCTVFGL 175 >gi|291534668|emb|CBL07780.1| Predicted nucleoside-diphosphate sugar epimerases [Roseburia intestinalis M50/1] Length = 622 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 48/265 (18%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 ++V PD+DL+ F ++ P++I + AA+ V E+ P A N Sbjct: 338 LKVKFPDLDLVVLIGSVRNTNRMNWIFETYHPEIIYHAAAHKHVPLMEESPNEAIKNNVL 397 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G I +AAD + + ISTD NP NI G SK E + +Y Sbjct: 398 GTWKIVQAADRYHVKRFVMISTD--------------KAVNPTNIMGASKRICEMIIQTY 443 Query: 139 TN----NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL--QIARAI 192 YV +R ++ GSN S++ L K++ E G P + I R Sbjct: 444 NKRSETEYVAVRFG---NVLGSNG--SVIPLFKKQIE-------RGGPVTVTDPNIVRYF 491 Query: 193 IQI--AHNLIENSDTSLRG--IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT 248 + I A +L+ + +G IF + G PV D A + S + P + +FT Sbjct: 492 MTIPEAVSLVLQAGAYAKGGEIFVLDM-GEPVKILDLARNLILLSGHK--PDEDIQIVFT 548 Query: 249 KQYPTKAHRPAYSCLDCSKLANTHN 273 P + +D L +T N Sbjct: 549 GLRPGEKLYEE-MLMDEEGLQDTEN 572 >gi|298230062|ref|ZP_06963743.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254725|ref|ZP_06978311.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503593|ref|YP_003725533.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae TCH8431/19A] gi|298239188|gb|ADI70319.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae TCH8431/19A] gi|327390029|gb|EGE88374.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae GA04375] Length = 239 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGRNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|148252644|ref|YP_001237229.1| dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] gi|146404817|gb|ABQ33323.1| dTDP-glucose 4,6-dehydratase [Bradyrhizobium sp. BTAi1] Length = 348 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 15/122 (12%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA------------ 81 +D+ + + F SF+PD II+ AA T VD++ D P+ N G Sbjct: 57 VDICERQKVEQAFASFAPDAIIHLAAETHVDRSIDGPDHFIQTNLVGTFTLLEVARRYLN 116 Query: 82 GAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTN 140 GA AD I++STD VF L + E + +P + Y SK + ++ Sbjct: 117 GAGRAKADQFRF--IHVSTDEVFGSLGEEGLFTETTAYDPSSPYSASKAGSDHLARAWHR 174 Query: 141 NY 142 Y Sbjct: 175 TY 176 >gi|303247703|ref|ZP_07333973.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] gi|302490975|gb|EFL50872.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] Length = 293 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%) Query: 5 VIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDF---ASFFLSFSPDVIINP--- 57 +IG + QI +++ +++ +V R + L + +DF A+ ++ P P Sbjct: 8 IIGGDSQIGRAIGAALRACEVPCRVTTRRERPLQEGEDFLDLAAETFAWQPREQGGPDAV 67 Query: 58 ----AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 A T+++ PE + IN + + + + G I ST+ VFDG + P Sbjct: 68 AFVCAGATSLEFCRTNPEASRRINVDQTMILVRTLAASGYRPILFSTNMVFDGTAVLPTP 127 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 + +PT PL+ YG+ K E V +ILR Sbjct: 128 Q-TPTCPLSEYGRQKRDVERLVQDQIPGALILR 159 >gi|254513948|ref|ZP_05126009.1| UDP-glucose 4-epimerase [gamma proteobacterium NOR5-3] gi|219676191|gb|EED32556.1| UDP-glucose 4-epimerase [gamma proteobacterium NOR5-3] Length = 343 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 10/141 (7%) Query: 3 CLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV 53 CL G L + C ++ +E I RP++ D+ + + PD Sbjct: 21 CLAFSEAGYQVSLLDNFCNSSPVVLERLEHIMGYRPELHEADVRDEQAVQRVLEATKPDA 80 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ A AV ++ ++P + N G ++ +A S G+ ++ S+ V+ + PI Sbjct: 81 VVHFAGLKAVGESVEQPLHYYDNNVSGTLSLLRAMQSSGVKQLVFSSSATVYGDPASVPI 140 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL E+ Sbjct: 141 TEDFPRSATNPYGRSKLIVED 161 >gi|170732208|ref|YP_001764155.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia MC0-3] gi|169815450|gb|ACA90033.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia MC0-3] Length = 321 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 49 FSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIPCIYI--STDYVF 104 + D +I+ AA V + E +P+ AF + N G +A AA G+ I S V Sbjct: 63 LTADCVIHLAARVHVMRDESPDPDAAFDATNVAGTLRLADAARHHGVRRIVFASSIKAVG 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS-IFGSNFL 159 +G P+ E +P + YG+SKL E ++A + + V++R VY +NFL Sbjct: 123 EGDGGVPLSETFEPHPQDAYGRSKLRAERQLAQFGASVGLDVVVVRPPLVYGPAVRANFL 182 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 R + V P A+ R+II + Sbjct: 183 ----------RMMDAVARGMPLPLGAVSARRSIIYV 208 >gi|260222038|emb|CBA31203.1| hypothetical protein Csp_C27370 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 297 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 28/174 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP--KDFASFFLS-FSPDVIINP- 57 K LV G G + + + VQ + V +DL P D + D ++ Sbjct: 33 KILVTGGTGAVGKYIVDDLVQHGYTVGV----LDLAAPARSDVTHHAVDVLQLDAVLQAM 88 Query: 58 AAYTAV-------DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-- 108 A Y AV D + F +N G+ + +AA GI + ++ G + Sbjct: 89 AGYDAVMHVAGIPHPLNDPAKRVFDVNVNGSFNVLEAAAQHGIAKVVFTSSESTMGFAFA 148 Query: 109 -------RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 P+DE P P + YG SK+ E+ +YT Y V LR WV+ Sbjct: 149 AHRLAPLYIPVDEAHPARPQDPYGLSKVVSEQICKTYTERYGMRTVCLRMPWVW 202 >gi|111657034|ref|ZP_01407833.1| hypothetical protein SpneT_02001735 [Streptococcus pneumoniae TIGR4] Length = 244 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 57 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 116 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 117 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 173 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 174 --DWKYVIF 180 >gi|13488052|ref|NP_085598.1| hypothetical protein mll9007 [Mesorhizobium loti MAFF303099] gi|14027847|dbj|BAB54439.1| mll9007 [Mesorhizobium loti MAFF303099] Length = 349 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN----PA 58 LV G +G + L+ ++ +RV DL P F+ L F I++ Sbjct: 5 ALVTGGSGYFGELLTKQLLEQGTHVRV----FDLNFP-GFSHPNLEFFKGTILDRNAVKQ 59 Query: 59 AYTAVDKA---------EDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLS 108 A + V K + ++ +SIN +G +A + + G+ IY S+ VF Sbjct: 60 AVSGVKKVFHNVAQVPLAKDVDLFWSINKDGTQILADESVAAGVVKLIYTSSSAVFGVPK 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE 132 P+ E + TNP YG++KLAGE Sbjct: 120 ANPVTENTVTNPAEDYGRAKLAGE 143 >gi|167618967|ref|ZP_02387598.1| epimerase/dehydratase [Burkholderia thailandensis Bt4] gi|257138211|ref|ZP_05586473.1| epimerase/dehydratase [Burkholderia thailandensis E264] Length = 330 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 28/188 (14%) Query: 48 SFSPDVIINPAAYTAV--DKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYIST-DY 102 S DV+++ AA V D+ D P+ AF N +A+AA G +++S+ Sbjct: 62 SLQADVVVHLAARVHVMRDRVLD-PDTAFRTSNVAATLRVARAARQQGARRFVFLSSIKA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNF 158 + + P+ E S P + YG+SKL E + + + VI+R VY Sbjct: 121 IAEADGGAPLREDSIPAPQDAYGRSKLEAERALEQLRDGASFDTVIIRPPLVYGPEVRAN 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAII-------QIAHNLIENSDTSLRGIF 211 LS++R V P A++ R+++ + H IE + +++G F Sbjct: 181 FLSLMR---------AVAQGVPLPLGAVRARRSMVYVDNLADAVMHCAIEPA--AMQGCF 229 Query: 212 HMTADGGP 219 H+ DG P Sbjct: 230 HVADDGAP 237 >gi|291521041|emb|CBK79334.1| dTDP-glucose 4,6-dehydratase [Coprococcus catus GD/7] Length = 339 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 QLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTAVLMDACRKYGIQRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|259503869|ref|ZP_05746771.1| dTDP-glucose 4,6-dehydratase [Lactobacillus antri DSM 16041] gi|259168170|gb|EEW52665.1| dTDP-glucose 4,6-dehydratase [Lactobacillus antri DSM 16041] Length = 327 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 F+ D I+N AA + VD++ PE+ N +G A+ A G+ + +STD V+ Sbjct: 72 EFNIDHIVNFAAESHVDRSILHPEVFVETNVQGTLALLDVAKREGVEKFLQVSTDEVYGT 131 Query: 107 LSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L T E SP P + Y SK + + V +Y Y Sbjct: 132 LGATGYFTEESPLQPNSPYSASKASADMMVRAYYETY 168 >gi|238753093|ref|ZP_04614544.1| NAD dependent sugar epimerase [Yersinia rohdei ATCC 43380] gi|238708681|gb|EEQ00948.1| NAD dependent sugar epimerase [Yersinia rohdei ATCC 43380] Length = 360 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYVF 104 F PD+I++ AA V ++ EP F +NA+G + +AA + G+ C I+TD V+ Sbjct: 83 FEPDLILHLAAQPLVRRSYREPVSTFLVNAQGTAHVLEAARMVKSVKGVLC--ITTDKVY 140 Query: 105 DGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E P + Y SK A E + S+ +Y Sbjct: 141 KNNEWPWPYRENDPLGGKDPYSASKAAAEMIIQSFAASY 179 >gi|311746580|ref|ZP_07720365.1| DNTP-hexose dehydratase-epimerase [Algoriphagus sp. PR1] gi|126575482|gb|EAZ79814.1| DNTP-hexose dehydratase-epimerase [Algoriphagus sp. PR1] Length = 297 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 20/238 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 MK L+ G +G + +S E+I +GR + L D ++ P +++I+ A Sbjct: 1 MKYLLTGASGFLGNYISKKLPG--EVISLGRSGNNELIC-DLSNKVPDLVPVEMVIHSAG 57 Query: 60 YTA-VDKAEDEPEIAFSINAEGAGAIAKAADSI-GIP--CIYISTDYVFDGLSRTPIDEF 115 + + K E+E + + +N +G + K + + +P ++IST V+ I+E Sbjct: 58 HAHRIPKNEEEEQQFWKVNFDGTKNLTKGLEKLETLPETFVFISTVAVYGLEQGELINES 117 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + NP + YGKSKL E + + N VILR + G N ++ + K R+ Sbjct: 118 TQENPQSPYGKSKLEAELFLTDWAEKNKVNLVILRLPLIAG--GENTPGNLGAMIKAIRK 175 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 G ++ +A I + NL+ S G+F++T DG S A+ Y+ Sbjct: 176 NYYFRVGEGKARKSMVLAEDIGTLIPNLVGKS-----GVFNLT-DGKHPSLAELDTYL 227 >gi|53713135|ref|YP_099127.1| putative reductase [Bacteroides fragilis YCH46] gi|60681401|ref|YP_211545.1| putative LPS biosynthesis related reductase [Bacteroides fragilis NCTC 9343] gi|11023522|gb|AAG26479.1|AF285774_19 putative reductase [Bacteroides fragilis] gi|52216000|dbj|BAD48593.1| putative reductase [Bacteroides fragilis YCH46] gi|60492835|emb|CAH07609.1| putative LPS biosynthesis related reductase [Bacteroides fragilis NCTC 9343] Length = 287 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N + + + P+ A INA + K +D +G I+ISTD VF G + Sbjct: 64 PDFILNCIG-VLIRGSREHPDNAILINAWFPHLLKKLSDEVGAKLIHISTDCVFSG-KKG 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 E + ++YG+SK GE Sbjct: 122 NYSETDFRDADDVYGRSKALGE 143 >gi|186681551|ref|YP_001864747.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] gi|186464003|gb|ACC79804.1| NAD-dependent epimerase/dehydratase [Nostoc punctiforme PCC 73102] Length = 342 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 42/239 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVG-RPDIDLLKPKDFASFFLSFSP 51 MK LV G G + L + ++ D +VG + + + PK + +P Sbjct: 1 MKILVTGTEGYLGSLLPPLLIERGHEVIGLDTGFYKVGWLYNANGVTPKTLNKDIRNITP 60 Query: 52 D------VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 D I++ A + + P I + IN G+ +A A ++G+ +Y+S+ V+ Sbjct: 61 DDLEGVEAIVHMAELSNDPAGQLAPNITYEINHVGSVRLASLAKAMGVRRFVYMSSCSVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSN---- 157 + + E SP NP Y + K E V ++ +R A + FG++ Sbjct: 121 GVATAGDVTEESPINPQTAYAECKTLVERDVTPLADDDFSPTFMRNA---TAFGASPRMR 177 Query: 158 ---FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAHNLIEN 202 L ++ LA ++I + D GTP AL I +AI+ I HN I N Sbjct: 178 FDIVLNNLAGLAWTSKQIKMTSD--GTPWRPLVHALDICKAIVCALEAPRDIVHNQIFN 234 >gi|301162857|emb|CBW22404.1| putative LPS biosynthesis related reductase [Bacteroides fragilis 638R] Length = 287 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N + + + P+ A INA + K +D +G I+ISTD VF G + Sbjct: 64 PDFILNCIG-VLIRGSREHPDNAILINAWFPHLLKKLSDEVGAKLIHISTDCVFSG-KKG 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 E + ++YG+SK GE Sbjct: 122 NYSETDFRDADDVYGRSKALGE 143 >gi|218244935|ref|YP_002370306.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8801] gi|218165413|gb|ACK64150.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8801] Length = 337 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F S S + +++ A + V ++ P+ + N + +A + + + S+ Sbjct: 68 LFSSHSIEAVMHFAGFGYVGESIQHPQKYYRNNVANTLTLLEAMNQASVNKLVFSSTCAT 127 Query: 105 DGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+++T PI E P P+N YGKSKL E + ++ Y Sbjct: 128 YGIAQTFPITEKHPQQPINTYGKSKLMVERMLKDFSQAY 166 >gi|110932073|gb|ABH02996.1| SpaM [Spirochaeta aurantia] Length = 320 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 13/136 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D II+ AA + + ++ EPEI + E ++ A ++G I+ S+ V+ Sbjct: 73 DRIIHLAANSDIRRSALEPEIELNKTFETTVSLLAVAAALGCNEFIFASSSAVYGDWPGQ 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLLSML--- 163 + E +P P++ YG +KLA E +A+ +N ILR + ++ GS +L Sbjct: 133 RLSELTPCRPISYYGAAKLASEAFIAAAVHNQPLAACILR---LPNVIGSGMTHGVLVDF 189 Query: 164 --RLAKERREISVVCD 177 +L ++ R +S++ D Sbjct: 190 VEKLRRDPRVLSILGD 205 >gi|76787113|ref|YP_329170.1| UDP-glucose 4-epimerase [Streptococcus agalactiae A909] gi|77406169|ref|ZP_00783240.1| UDP-glucose 4-epimerase [Streptococcus agalactiae H36B] gi|76562170|gb|ABA44754.1| UDP-glucose 4-epimerase [Streptococcus agalactiae A909] gi|77175209|gb|EAO78007.1| UDP-glucose 4-epimerase [Streptococcus agalactiae H36B] Length = 331 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-S 108 S D +I+ AAY+ V ++ ++P F+ N G + + I I S+ G+ + Sbjct: 68 SIDTVIHFAAYSLVAESMEQPLKYFNNNTAGMINLLEVMTEFAIKFIVFSSTAATYGIPN 127 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E +P P+N YG+SKL E + A+Y +V LR Sbjct: 128 DIPIKEITPQRPINPYGESKLMMETIMKWADAAYGVKFVPLR 169 >gi|325571101|ref|ZP_08146673.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] gi|325156186|gb|EGC68372.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] Length = 343 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 S F + D +I+ AA + V ++ ++P F+ N G + + + I + ST Sbjct: 69 LQSVFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKEHQVKHIVFSST 128 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGS 156 + +PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G+ Sbjct: 129 AATYGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKYVALR---YFNVAGA 185 Query: 157 N-------------FLLSMLRLAK--ERREISVVCDQFGTP 182 L+ ++ A +R+E+++ + + TP Sbjct: 186 KSDASIGEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTP 226 >gi|52079688|ref|YP_078479.1| putative UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52785050|ref|YP_090879.1| hypothetical protein BLi01280 [Bacillus licheniformis ATCC 14580] gi|52002899|gb|AAU22841.1| putative UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52347552|gb|AAU40186.1| putative protein [Bacillus licheniformis ATCC 14580] Length = 328 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA + V ++ ++PEI F N + A + A G+ ++ ST V+ + Sbjct: 68 DAVIHFAAKSLVSESIEKPEIYFRENTLKSCAFFETAIKEGVNNIVFSSTAAVYGIPEKA 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P +P+N YG+SKL E+ Sbjct: 128 PIKEAAPLSPVNPYGESKLMIEK 150 >gi|42523176|ref|NP_968556.1| UDP-glucose 4-epimerase [Bdellovibrio bacteriovorus HD100] gi|39575381|emb|CAE79549.1| probable UDP-glucose 4-epimerase [Bdellovibrio bacteriovorus HD100] Length = 327 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 21/162 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-----------------GRPDIDLLKPKDFAS 44 K LV G +G I L+ + V + +R R DI+++ Sbjct: 4 KVLVTGADGFIGSHLTELLVSEGYSVRALVNYNSFNSWGWLDSSAVRSDIEVVSGDIRDP 63 Query: 45 FF---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIST 100 F ++ D I + AA A+ + P+ N G I KAA G+ ++ ST Sbjct: 64 FLCRDITKGMDAIFHLAALIAIPYSYVAPQSYVETNVTGTLNICKAALDNGVAKVVHTST 123 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ PIDE P P + Y SK+A + S+ N++ Sbjct: 124 SEVYGTAQYVPIDEKHPLQPQSPYSASKIASDAMAMSFFNSF 165 >gi|33594840|ref|NP_882483.1| NAD dependent epimerase/dehydratase family protein [Bordetella parapertussis 12822] gi|33599113|ref|NP_886673.1| NAD dependent epimerase/dehydratase family protein [Bordetella bronchiseptica RB50] gi|33564916|emb|CAE39862.1| NAD dependent epimerase/dehydratase family protein [Bordetella parapertussis] gi|33575159|emb|CAE30622.1| NAD dependent epimerase/dehydratase family protein [Bordetella bronchiseptica RB50] Length = 325 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N EG + +A + +Y S+ V+ P+ E P N N YG Sbjct: 93 KDFPRTAFHVNIEGTFNVLEACVRNNVKRLVYSSSASVYGDAVEVPMTEEHPFNNRNFYG 152 Query: 126 KSKLAGEEKVASYTN----NYVILRTAWVYS 152 SK+AGE ++ + +YV LR VY Sbjct: 153 ASKIAGEAMCHAFHDRYGLSYVGLRYMNVYG 183 >gi|319653274|ref|ZP_08007376.1| LPS biosynthesis like reductase [Bacillus sp. 2_A_57_CT2] gi|317395195|gb|EFV75931.1| LPS biosynthesis like reductase [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 13/167 (7%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PDVIIN + AE ++AF +N+ + K A+ I+ISTD VF G ++ Sbjct: 59 KPDVIINCIGILN-EFAEKNQKLAFQVNSLLPHQLVKFAERYNGKVIHISTDCVFLG-TK 116 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 E + ++Y +SK GE ++ ++ +RT+ + + + L K++ Sbjct: 117 GNYSENDIPDGTSVYAESKQLGE----IISDTHLTIRTSIIGPELKGSGIGLFLWFMKQK 172 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 I + + + L++A+AI + ++ G++H++ D Sbjct: 173 GNIKGYKEVYWNGVTTLELAKAIDWMIKQ-------NITGLYHLSCD 212 >gi|312868781|ref|ZP_07728972.1| dTDP-glucose 4,6-dehydratase [Lactobacillus oris PB013-T2-3] gi|311095680|gb|EFQ53933.1| dTDP-glucose 4,6-dehydratase [Lactobacillus oris PB013-T2-3] Length = 327 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 F+ D I+N AA + VD++ PE+ N +G A+ A G+ + +STD V+ Sbjct: 72 EFNIDHIVNFAAESHVDRSILHPEVFVETNVQGTLALLDVAKREGVEKFLQVSTDEVYGT 131 Query: 107 LSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L T E SP P + Y SK + + V +Y Y Sbjct: 132 LGATGYFTEESPLQPNSPYSASKASADMMVRAYYETY 168 >gi|302187362|ref|ZP_07264035.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. syringae 642] Length = 342 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 2/105 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ F +++ A AV ++ EP F N G+ + +A G+ Sbjct: 57 DVRSKATLHRLFARHPVKAVVHCAGLKAVGESVREPLRYFETNVSGSVNLCQAMAEAGVF 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVAS 137 ++ S+ V+ R P+DE SP P N YG SKL E + S Sbjct: 117 DLLFSSSATVYGECERMPLDENSPPGLPTNPYGHSKLMAEHVMQS 161 >gi|91203723|emb|CAJ71376.1| similar to UDPglucose 4-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 309 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 19/165 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-------RPDIDLL--KPKDFASFFLSFSP 51 ++ LV+G NG I L + + +RV R +DL+ + DF + L Sbjct: 5 LRALVLGGNGFIGSHLVDRLLVEGHYVRVFDRYEERYRRPLDLVDYRNGDFGNRGLLVDA 64 Query: 52 ----DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 D + + + T + D+P S N + + + + GI ++IS+ G Sbjct: 65 LQEMDTVFHLISTTLPKTSNDDPAFDVSSNVVESIFLLEQCVAAGIKKIVFISSGGAIYG 124 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 +T PI E SPT PL YG +KLA E+ + Y +YV+LR Sbjct: 125 NPKTLPIAEDSPTEPLCSYGITKLANEKYLGLFSYLYGLDYVVLR 169 >gi|225859630|ref|YP_002741140.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose4-epimerase) [Streptococcus pneumoniae 70585] gi|225721245|gb|ACO17099.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose4-epimerase) [Streptococcus pneumoniae 70585] Length = 233 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|187934855|ref|YP_001887437.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B str. Eklund 17B] gi|187723008|gb|ACD24229.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum B str. Eklund 17B] Length = 339 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ K F +PD+++N AA + VD++ + PEI N G + A GI Sbjct: 58 IDIADRKAVYDMFKKENPDIVVNFAAESHVDRSIENPEIFLKTNIMGTAVLMDACIKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L PID F+ P++ Sbjct: 118 KRYHQVSTDEVYGDL---PIDRPDLFFTEETPIH 148 >gi|325261287|ref|ZP_08128025.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. D5] gi|324032741|gb|EGB94018.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. D5] Length = 342 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+I+N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 68 KLFEEEHPDMIVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGITRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVMAYYRTY 171 >gi|260662864|ref|ZP_05863758.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] gi|260552945|gb|EEX25944.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] Length = 310 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + DV++N AA + VD++ ++P S N G + A + Sbjct: 59 DIRDAATVSEVLATHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAQVR 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE--EKVASYT--NNYVILRTAWV 150 + +STD V+ + +DE +P P + Y +K + + A +T + VI R+A Sbjct: 119 LVQVSTDEVYGSIVAGRVDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANN 178 Query: 151 Y 151 Y Sbjct: 179 Y 179 >gi|260578871|ref|ZP_05846777.1| UDP-glucose 4-epimerase [Corynebacterium jeikeium ATCC 43734] gi|258603018|gb|EEW16289.1| UDP-glucose 4-epimerase [Corynebacterium jeikeium ATCC 43734] Length = 309 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 21/159 (13%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P+I + N + + G+ ++ ST + + PI Sbjct: 50 VMHFAARSLVGESVEKPDIYWHHNVGTSLYLLDQMREHGVQNLVFSSTAATYGEPEQVPI 109 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS---- 161 E PT P N YG SKLA + + SY N Y + T A Y G N + Sbjct: 110 TEDMPTAPTNPYGASKLAIDHMITSYANAYGLAATSLRYFNVAGAYGDIGENHKVETHLI 169 Query: 162 --MLRLAKERRE-ISVVCDQFGT--PTSALQIARAIIQI 195 +L++A RE IS+ FGT PT+ R I I Sbjct: 170 PLVLQVALGHREHISI----FGTDYPTTDGTAVRDYIHI 204 >gi|257867696|ref|ZP_05647349.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257874023|ref|ZP_05653676.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257876602|ref|ZP_05656255.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] gi|257801779|gb|EEV30682.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257808187|gb|EEV37009.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257810768|gb|EEV39588.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] Length = 332 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 S F + D +I+ AA + V ++ ++P F+ N G + + + I + ST Sbjct: 58 LQSVFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKEHQVKHIVFSST 117 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 + +PI E +PTNP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L+ A +R+E+++ + + TP Sbjct: 175 KSDASIGEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTP 215 >gi|257057960|ref|YP_003135848.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8802] gi|256588126|gb|ACU99012.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 8802] Length = 337 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F S S + +++ A + V ++ P+ + N + +A + + + S+ Sbjct: 68 LFSSHSIEAVMHFAGFGYVGESIQHPQKYYRNNVANTLTLLEAMNQASVNKLVFSSTCAT 127 Query: 105 DGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+++T PI E P P+N YGKSKL E + ++ Y Sbjct: 128 YGIAQTFPITEKHPQQPINTYGKSKLMVERMLKDFSQAY 166 >gi|15898578|ref|NP_343183.1| dTDP-glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus P2] gi|284174229|ref|ZP_06388198.1| dTDP-glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus 98/2] gi|13815027|gb|AAK41973.1| dTDP-Glucose 4,6-dehydratase (rfbB-3) [Sulfolobus solfataricus P2] gi|261603038|gb|ACX92641.1| NAD-dependent epimerase/dehydratase [Sulfolobus solfataricus 98/2] Length = 312 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+++N AA T VD++ P+ + N G + +AA ++ISTD V+ Sbjct: 65 DIVVNFAAETHVDRSIYRPQDFVTTNVLGVVNLLEAARKYDFKYVHISTDEVY---GEEC 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 DE SP P + Y SK + + V +Y Y I Sbjct: 122 ADEDSPLQPSSPYSASKASADLFVKAYVRTYGI 154 >gi|323351727|ref|ZP_08087381.1| UDP-glucose 4-epimerase [Streptococcus sanguinis VMC66] gi|322122213|gb|EFX93939.1| UDP-glucose 4-epimerase [Streptococcus sanguinis VMC66] Length = 347 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 25/167 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 67 LADKDFMRSVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMISLLEVMQECGVK 126 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 127 NIVFSSTAATYGIPEEVPILETTPQRPINPYGESKLMMETIMRWADQAYGIKFVALR--- 183 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGT 181 +++ G ++ L +L++A+ +RE I+V D + T Sbjct: 184 YFNVAGAKPDGSIGEDHGPETHLLPIVLQVAQGKREKIAVFGDDYDT 230 >gi|315645840|ref|ZP_07898961.1| UDP-glucose 4-epimerase [Paenibacillus vortex V453] gi|315278601|gb|EFU41915.1| UDP-glucose 4-epimerase [Paenibacillus vortex V453] Length = 329 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F D +I+ AA + V ++ +P + N G + +A + G+ Sbjct: 50 DLRDKTLLNQLFSENDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVR 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST + + PI+E T P N+YG++KL E ++ + YV LR Sbjct: 110 KIVFSSTAATYGEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFN 169 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGTP 182 + G S+ + +L+ A K+R ISV D + TP Sbjct: 170 AAGSHASGSIGEDHRPESHLIPLVLQTALKQRPSISVFGDDYSTP 214 >gi|134045537|ref|YP_001097023.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C5] gi|132663162|gb|ABO34808.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C5] Length = 296 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 31/176 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---------------RVGRPDIDLLKPKDF 42 MK LV G G I + + ++ DV I+ + DI L K D Sbjct: 1 MKILVTGGAGFIGSHIVDILIENGHDVSILDNLSTGNEKNLNTSAKFINGDI-LDKTLDL 59 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD- 101 + F + +I+ AA V+K+ P +N G I + G+ I S+ Sbjct: 60 SGF------ECVIHEAAQINVNKSLSAPMFDAEVNILGTVNILEKMKKYGVKKIIYSSSG 113 Query: 102 -YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 V+ P+DE P PL+ YG SK EE + Y Y ILR + VY Sbjct: 114 GAVYGEPEYLPVDENHPIKPLSPYGSSKFCAEEYIELYNRLYGIEYCILRYSNVYG 169 >gi|83589532|ref|YP_429541.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] gi|83572446|gb|ABC18998.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] Length = 337 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DLL + F PD +++ AA+ V ++ +P + N +G + G+ Sbjct: 51 DLLDAAKLEAVIRDFRPDAVMHFAAHIVVPESVAQPLKYYINNVQGTLNLLACMQKSGVN 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 I+ S+ V+ R P+ E +P +P+N YG SK Sbjct: 111 KLIFSSSAAVYGIPERIPVPEEAPLHPINPYGHSK 145 >gi|256963884|ref|ZP_05568055.1| UDP-glucose 4-epimerase [Enterococcus faecalis HIP11704] gi|256954380|gb|EEU71012.1| UDP-glucose 4-epimerase [Enterococcus faecalis HIP11704] Length = 173 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + PI E PTNP N YG+SKL E+ + +Y YV LR Sbjct: 120 TYGEPKAMPITEEIPTNPKNPYGESKLMMEKIMKWCDKAYGMKYVALR 167 >gi|282864493|ref|ZP_06273548.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] gi|282560432|gb|EFB65979.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] Length = 317 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSP 51 M+ LV+G+ G + + S D ++R GR D+ + A S +P Sbjct: 1 MRVLVLGHTGYLGGHVAGSPALPPDTVLLRSGRSSGAELRVDLARVGVDALAGILESAAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAG----AIAKAADSIGIPCIYISTDYVFDGL 107 D +IN A D E +NA G A+ +AA + + + +Y G Sbjct: 61 DAVINCAGAVGGDAVE-----LAEVNARGPAVLCAALRRAAPGARLVHLGSAAEY-GPGA 114 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 + E + P++ YG +KLAG VAS + V+LR Sbjct: 115 EGVRVTESAAARPVSPYGATKLAGTVAVASSGLDAVVLR 153 >gi|237741266|ref|ZP_04571747.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium sp. 4_1_13] gi|294784528|ref|ZP_06749817.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_27] gi|229430798|gb|EEO41010.1| nucleoside-diphosphate-sugar epimerase [Fusobacterium sp. 4_1_13] gi|294487744|gb|EFG35103.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_27] Length = 327 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 27/181 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 ++IN G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNINVLGTKNVVQVCEEKILKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNHYIKSKII 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L K+ ++++ + C + Sbjct: 145 AENIIKSSNLNYMIIRPRGLFGVGDTSIIPRLLELNKKIGIPLFVDGKQKVDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 AL++A +EN+ S R I+++T D P+ + + +F+ E G Y Sbjct: 203 VAYALRLA----------LENNQYS-REIYNITND-EPIEFKEILT-LFFNEMETKGKYL 249 Query: 242 K 242 K Sbjct: 250 K 250 >gi|53713860|ref|YP_099852.1| putative reductase [Bacteroides fragilis YCH46] gi|52216725|dbj|BAD49318.1| putative reductase [Bacteroides fragilis YCH46] Length = 285 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N + + + P+ A INA + K +D +G I+ISTD VF G + Sbjct: 64 PDFILNCIG-VLIRGSREHPDNAILINAWFPHLLKKLSDEVGAKLIHISTDCVFSG-KKG 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 E + ++YG+SK GE Sbjct: 122 NYSETDFRDADDVYGRSKALGE 143 >gi|15901695|ref|NP_346299.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae TIGR4] gi|148989660|ref|ZP_01820992.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP6-BS73] gi|149006478|ref|ZP_01830177.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP18-BS74] gi|14973370|gb|AAK75939.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae TIGR4] gi|147761776|gb|EDK68739.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP18-BS74] gi|147924977|gb|EDK76059.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP6-BS73] gi|332199888|gb|EGJ13963.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA41317] Length = 233 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|295398886|ref|ZP_06808868.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] gi|294978352|gb|EFG53948.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] Length = 328 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 16/152 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F D +I+ AA + V ++ EP + N G + + + + I + ST V+ Sbjct: 61 FRKHEIDAVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNESSVKQIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----- 155 + PI E PT P N YG++KLA E+ + +Y Y+ LR V +G Sbjct: 121 GEPKQIPIVETDPTMPTNTYGETKLAVEKMMKWVEQAYGIRYISLRYFNVAGAYGTLIGE 180 Query: 156 -----SNFLLSMLRLA-KERREISVVCDQFGT 181 ++ + +L++ +R EI + D + T Sbjct: 181 DHDPETHLIPLILKVPLGQRDEIHIFGDDYDT 212 >gi|300774922|ref|ZP_07084785.1| dTDP-glucose 4,6-dehydratase [Chryseobacterium gleum ATCC 35910] gi|300506737|gb|EFK37872.1| dTDP-glucose 4,6-dehydratase [Chryseobacterium gleum ATCC 35910] Length = 359 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 18/126 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---------- 84 D+ KP++ F + PD +++ AA + VD++ +P + N G + Sbjct: 60 DITKPEELRRIFEKYKPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWTL 119 Query: 85 ------AKAADSIGIPCIY-ISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVA 136 + D Y +STD V+ L T E +P +P + Y SK A + V Sbjct: 120 NPDHTHGRFPDEKRTNLFYHVSTDEVYGSLGETGFFLETTPYDPQSPYSASKAASDHLVR 179 Query: 137 SYTNNY 142 +Y N Y Sbjct: 180 AYGNTY 185 >gi|72180965|ref|XP_784659.1| PREDICTED: similar to HrEpiB [Strongylocentrotus purpuratus] gi|115713387|ref|XP_001204176.1| PREDICTED: similar to HrEpiB [Strongylocentrotus purpuratus] Length = 328 Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 + +I+ AA E +PE A IN EG I IY ST + ++ T Sbjct: 88 NAVIHLAAIVGYPACEKDPEEARQINEEGTANIVNNLRP-DQRLIYASTGSCYGAVNGTC 146 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +E +P +PL +YG +K GEE S V LR A V+ I Sbjct: 147 TEE-TPISPLTLYGSTKAKGEELTRSVGG--VGLRLATVFGI 185 >gi|328883006|emb|CCA56245.1| UDP-glucose 4-epimerase [Streptomyces venezuelae ATCC 10712] Length = 329 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 21/192 (10%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ +L S D +++ AAY+ V ++ PE + N G A+ A + G+ ++ ST Sbjct: 57 AARWLDGSYDAVLHFAAYSQVGESVTRPEKYWENNVGGTMALLAAMRAAGVRRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR---TAWVYSIF 154 + + PI E + T P + YG SKLA + + A++ + V LR A Y Sbjct: 117 ATYGEPASVPITETAATAPTSPYGASKLAVDHMIGGECAAHGLSAVSLRYFNVAGAYGSL 176 Query: 155 G------SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 G S+ + +L++A +R ISV + + TP R I +A + ++ L Sbjct: 177 GERHAPESHLVPLVLQVALGDREAISVYGEDYPTPDG--TCVRDYIHVA----DLAEAHL 230 Query: 208 RGIFHMTADGGP 219 + MTA G P Sbjct: 231 LALDAMTAGGVP 242 >gi|189219879|ref|YP_001940520.1| UDP-glucose 4-epimerase [Methylacidiphilum infernorum V4] gi|189186737|gb|ACD83922.1| UDP-glucose 4-epimerase [Methylacidiphilum infernorum V4] Length = 321 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + S F S P+ +I+ AA V ++ + P + F N + A + Sbjct: 51 DLADRELLFSVFDSERPEAVIHFAAKALVSESMNSPSLYFRNNVAFGINLLDALVKFEVK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ ST V+ +++ PIDE P +P N YG+SKL E+ + Y Sbjct: 111 RIVFSSTCSVYGCVNKIPIDENVPVHPENPYGESKLLFEKMLEWY 155 >gi|152991939|ref|YP_001357660.1| NAD-dependent epimerase/dehydratase [Sulfurovum sp. NBC37-1] gi|151423800|dbj|BAF71303.1| NAD-dependent epimerase/dehydratase [Sulfurovum sp. NBC37-1] Length = 299 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K + S PD +I+ AA + V E + + +N G I ++ + Sbjct: 51 DITKKEQIDKVIASVKPDYVIHIAAISFV--GESNASLIYDVNVIGTENILQSLRDNSVK 108 Query: 95 ---CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWV 150 I S+ V+ + +DE P+N YG SKL+ E ++Y N++ VI+ + Sbjct: 109 PEKVILASSATVYGNQGKEVLDESMCPQPVNHYGCSKLSMEHMASNYFNDFDVIITRPFN 168 Query: 151 YSIFG--SNFLLSML--RLAKERREISV 174 Y+ G S+FL+ + K ++EI + Sbjct: 169 YTGIGQESHFLIPKIVDHFKKGKKEIEL 196 >gi|90418131|ref|ZP_01226043.1| NAD-dependent epimerase/dehydratase [Aurantimonas manganoxydans SI85-9A1] gi|90337803|gb|EAS51454.1| NAD-dependent epimerase/dehydratase [Aurantimonas manganoxydans SI85-9A1] Length = 337 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 26/159 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPAA 59 MK ++ G +G + + L+ V D E + V D++K D + F + +PAA Sbjct: 1 MKHVLFGGDGFVGRHLAQKLVADGESVLVA----DIVK-SDLPHYAQCEFLHTDVTDPAA 55 Query: 60 YTAVDKAEDE-------------------PEIAFSINAEGAGAIAKAADSIG-IPCIYIS 99 AV A D+ + + +N G I +A G ++ + Sbjct: 56 VRAVPIAADDMVYNLSAKMLSPIMPRAKRHDFFYPVNYHGTKHIMEAMGEAGATKLVHFT 115 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 TD ++ P+ E P +PL YG+SKL E A + Sbjct: 116 TDMIYGHTQVYPMTEEHPVSPLGEYGQSKLDTEHLAAEW 154 >gi|331695737|ref|YP_004331976.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] gi|326950426|gb|AEA24123.1| UDP-glucose 4-epimerase [Pseudonocardia dioxanivorans CB1190] Length = 319 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ A+ F +F PDV+ + AA V ++ EP + N G+ + AA G Sbjct: 54 LDVRDGAGVAAAFTAFRPDVVFHLAAQIDVRRSMTEPAFDAATNVLGSVNVFDAARLAGA 113 Query: 94 PCIYIST--DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRT 147 + ++ ++ S P E P PL+ YG SK EE A ++ + V LR Sbjct: 114 RRVVNTSTGGAIYGETSTVPTPETEPARPLSAYGLSKRTAEEYGAWFRRAHGLDVVTLRY 173 Query: 148 AWVYS 152 VY Sbjct: 174 GNVYG 178 >gi|148993325|ref|ZP_01822865.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP9-BS68] gi|221232603|ref|YP_002511757.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae ATCC 700669] gi|147928092|gb|EDK79111.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP9-BS68] gi|220675065|emb|CAR69643.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae ATCC 700669] gi|301794830|emb|CBW37286.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae INV104] gi|332072691|gb|EGI83174.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA17570] gi|332200423|gb|EGJ14496.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA47368] Length = 233 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|58039515|ref|YP_191479.1| dTDP-glucose 4,6-dehydratase [Gluconobacter oxydans 621H] gi|58001929|gb|AAW60823.1| dTDP-glucose 4,6-dehydratase [Gluconobacter oxydans 621H] Length = 351 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 12/114 (10%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIG---- 92 + F + PD +++ AA + VD++ D P + N G ++ +AA +++G Sbjct: 64 EMQRLFEEYRPDAVMHLAAESHVDRSIDGPGVFIQTNVVGTYSLLEAARKYWNTLGDAEK 123 Query: 93 --IPCIYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L + P E +P +P + Y SK + + V ++ + Y Sbjct: 124 KAFRFHHISTDEVFGHLEPNDPPFTETTPYDPRSPYSASKASSDHLVRAWFHTY 177 >gi|241206871|ref|YP_002977967.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860761|gb|ACS58428.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 327 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E +R G + D+ P I++ AA Sbjct: 20 CLDLANKGYTPVVFDNFSNGHREFVRWGPAEEGDIRDRTRLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKYIVEQALADY-DQYRSLRS 165 >gi|225570131|ref|ZP_03779156.1| hypothetical protein CLOHYLEM_06227 [Clostridium hylemonae DSM 15053] gi|225160926|gb|EEG73545.1| hypothetical protein CLOHYLEM_06227 [Clostridium hylemonae DSM 15053] Length = 635 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 22/114 (19%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 + P+V+ + AA+ V ED P A N G A+AAD G+ + ISTD Sbjct: 351 YRPNVVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKTARAADKFGVEKFVLISTD------ 404 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSN 157 NP NI G SK E + +Y YV +R ++ GSN Sbjct: 405 --------KAVNPTNIMGASKRLCEMIIQTYNRYSKTEYVAVRFG---NVLGSN 447 >gi|255976250|ref|ZP_05426836.1| UDP-galactose-4-epimerase [Enterococcus faecalis T2] gi|255969122|gb|EET99744.1| UDP-galactose-4-epimerase [Enterococcus faecalis T2] Length = 159 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + PI E +PTNP N YG+SKL EK+ + +N Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLM-MEKIMKWCDN 157 >gi|125719001|ref|YP_001036134.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK36] gi|125498918|gb|ABN45584.1| UDP-glucose 4-epimerase, putative [Streptococcus sanguinis SK36] gi|324995852|gb|EGC27763.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis SK678] Length = 286 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+SF DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGETWKEKDFSSF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E ++ +N + +A+ A G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESEYNQVNTQLPYELAQKAKREGVKQFIFMSSMSVYGEVLGDRVITKDT 115 Query: 117 PTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVY 151 P + YGKSKLA E+ ++ S +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLTELESEDFKLAVLRPPMVY 153 >gi|60682071|ref|YP_212215.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] gi|60493505|emb|CAH08292.1| putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] Length = 298 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 8/139 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L G +G + +L S+ +I VG R + + D + + DV+++ Sbjct: 1 MKLLFTGASGFLGSNLYSLLKDKYQIRTVGLTSRDNYTINLVSDVPKLNIKY--DVVLHA 58 Query: 58 AAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDE 114 A ++ K E+E ++ F +N +G + A ++ GIP I+IST V+ S I E Sbjct: 59 AGKAHSIPKTEEEKQLFFDVNLQGTKNLCTALENSGIPKAFIFISTVAVYGCDSGENITE 118 Query: 115 FSPTNPLNIYGKSKLAGEE 133 N Y SK+ E+ Sbjct: 119 EHSLNGTTPYALSKIKAEK 137 >gi|303229527|ref|ZP_07316315.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-134-V-Col7a] gi|302515652|gb|EFL57606.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-134-V-Col7a] Length = 329 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 I++ AA++ V ++ P I + N G+ + ++A G+ ++ ST V+ PI Sbjct: 69 IMHFAAHSQVGESMINPSIYYENNVVGSYRLIESARQAGVQYFVFSSTAAVYGEPEEVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 E + P N+YG++KL EE + A Y + YV LR Sbjct: 129 VETAKLQPTNVYGRTKLMIEEMLYDYSAIYGSTYVALR 166 >gi|74317792|ref|YP_315532.1| UDP-galactose 4-epimerase [Thiobacillus denitrificans ATCC 25259] gi|74057287|gb|AAZ97727.1| UDP-glucose 4-epimerase [Thiobacillus denitrificans ATCC 25259] Length = 336 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 7/140 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRV-GRP----DIDLLKPKDFASFFLSFSPDVI 54 ++CL G++ + +LS+ + +E + R+ G+P D+ F + D + Sbjct: 18 VECLAAGHDVVVFDNLSNSSEKSLERVARIAGKPVSFVRGDIRDRHALRKLFAEHAVDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPID 113 ++ A AV ++ + P + N G+ A+ + +G+ I + S+ V+ R PI Sbjct: 78 VHFAGLKAVGESVEHPLRYYDNNIGGSIALFETMAEVGLKTIVFSSSATVYGDPVRVPIT 137 Query: 114 EFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL EE Sbjct: 138 EDFPLSATNPYGRSKLFIEE 157 >gi|304321003|ref|YP_003854646.1| UDP-glucose 4-epimerase [Parvularcula bermudensis HTCC2503] gi|303299905|gb|ADM09504.1| UDP-glucose 4-epimerase [Parvularcula bermudensis HTCC2503] Length = 327 Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F + P +I AA V + E P ++ N G + +A G+ + S+ Sbjct: 61 FAAHRPAAVIQFAASIEVGEGEANPLKFWNNNVGGTVTLLEAMAGAGVTALVFSSTCATY 120 Query: 106 GL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 G+ R PI E P P ++YG++KLA E+ +A+ Sbjct: 121 GIPDRMPIGESEPQRPFSVYGETKLAVEKALAA 153 >gi|262195081|ref|YP_003266290.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262078428|gb|ACY14397.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 331 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRTPI 112 II+ AA T+V ++ ++P IN G + + A G+ + + S+ V+ P+ Sbjct: 86 IIHLAAQTSVVRSVEQPLHDIRINYAGTAQVLEYARHRGVAKVVLASSAAVYGDTEELPV 145 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 E PT PL+ YG +KL E+ + Y+ + + TA ++++G Sbjct: 146 RETLPTRPLSPYGANKLGSEQLLYYYSAVHGVGTTALRFFNVYG 189 >gi|302523923|ref|ZP_07276265.1| epimerase/dehydratase [Streptomyces sp. AA4] gi|302432818|gb|EFL04634.1| epimerase/dehydratase [Streptomyces sp. AA4] Length = 342 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%) Query: 16 LSSMCVQDVEIIRVGRPDIDL--LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 L S CV E+ +DL ++P+ A F D +I+ AA + +PEI Sbjct: 34 LYSTCVLGPEVTDPKAVSVDLRDVRPEHVAGF------DAVIHLAALSNDPLGALDPEIT 87 Query: 74 FSINAEGAGAIAKAADSIGI-PCIYISTDYVF-----DGLSRTPIDEFSPTNPLNIYGKS 127 ++IN + +A+ A G+ +Y ST V+ DGL ++E +P P+ Y +S Sbjct: 88 YAINHRASTRLAQLAKDAGVRRFLYASTCSVYGASGNDGL----VNEDAPLRPVTPYAES 143 Query: 128 KLAGEEKVASYTNNY---VILRTAWVY 151 K+ E+ + +N V LR A + Sbjct: 144 KVRVEDDLVGLADNDFSPVFLRNATAF 170 >gi|255974817|ref|ZP_05425403.1| UDP-galactose-4-epimerase [Enterococcus faecalis T2] gi|255967689|gb|EET98311.1| UDP-galactose-4-epimerase [Enterococcus faecalis T2] Length = 160 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDY 102 S F S + +++ AA + V ++ ++P + F+ N G + G+ I + ST Sbjct: 60 SVFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + PI E +PTNP N YG+SKL EK+ + +N Sbjct: 120 TYGEPKAMPITEETPTNPKNPYGESKLM-MEKIMKWCDN 157 >gi|168187551|ref|ZP_02622186.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum C str. Eklund] gi|169294549|gb|EDS76682.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum C str. Eklund] Length = 335 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 +++ST V+D IDE P P++ YG +K+A E V SY N Y V++R Sbjct: 138 VVFMSTCMVYDKAEEKGIDELHPVKPVSPYGGAKIAAENMVLSYYNAYRLPTVVIRPFNT 197 Query: 151 YSIF 154 Y F Sbjct: 198 YGPF 201 >gi|68536175|ref|YP_250880.1| hypothetical protein jk1098 [Corynebacterium jeikeium K411] gi|68263774|emb|CAI37262.1| galE [Corynebacterium jeikeium K411] Length = 344 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 21/159 (13%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P+I + N + + G+ ++ ST + + PI Sbjct: 85 VMHFAARSLVGESVEKPDIYWHHNVGTSLYLLDQMREHGVQNLVFSSTAATYGEPEQVPI 144 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS---- 161 E PT P N YG SKLA + + SY N Y + T A Y G N + Sbjct: 145 TEDMPTAPTNPYGASKLAIDHMITSYANAYGLAATSLRYFNVAGAYGDIGENHKVETHLI 204 Query: 162 --MLRLAKERRE-ISVVCDQFGT--PTSALQIARAIIQI 195 +L++A RE IS+ FGT PT+ R I I Sbjct: 205 PLVLQVALGHREHISI----FGTDYPTADGTAVRDYIHI 239 >gi|313892813|ref|ZP_07826394.1| UDP-glucose 4-epimerase [Veillonella sp. oral taxon 158 str. F0412] gi|313442744|gb|EFR61155.1| UDP-glucose 4-epimerase [Veillonella sp. oral taxon 158 str. F0412] Length = 329 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA++ V ++ P I + N G+ + ++A + G+ ++ ST V+ PI Sbjct: 69 VMHFAAHSQVGESMVNPAIYYENNVVGSYHLIESARAAGVKHFVFSSTAAVYGEPEVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL EE ++ Y+ + YV LR Sbjct: 129 REGAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYVALR 166 >gi|318040899|ref|ZP_07972855.1| NDP-sugar dehydratase or epimerase, putative [Synechococcus sp. CB0101] Length = 324 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 22/152 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD------------IDLLKPKDFASFFLS 48 + LV G +G I ++ ++ D E++ + D +D+L + F Sbjct: 4 RFLVTGGSGFIGTNIVQKLIELDHEVLNLSIDDPKNFDHNHLFKRVDILDKSNLEKSFYE 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAADSIGIPCIYISTDYVFD 105 F P+ +I+ AA T +D + +S N +G I DS+ IY S+ VFD Sbjct: 64 FQPEYVIHLAAKTDLDG---KTLSDYSANIDGVQNIINCVNNCDSVE-KVIYTSSRLVFD 119 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 +S P+ N IYG+SK+ GE V S Sbjct: 120 -ISHKPVHNLD-YNASTIYGQSKVKGELAVLS 149 >gi|221124296|ref|XP_002160856.1| PREDICTED: similar to Probable UDP-glucose 4-epimerase [Hydra magnipapillata] Length = 294 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ D F F P +++ AA V + P+ N G G I + GI Sbjct: 60 IDVAHAHDINEVFEDFKPARLVHLAAQAGVRYSIQNPKAYLDSNLVGFGNILEGCRHNGI 119 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 +Y S+ V+ G + P E N P+++Y +K A E +Y++ + + LR Sbjct: 120 EHLVYASSSSVYGGNTNMPFSEHDSVNHPVSLYAATKKANELMAHTYSHLFRLPTTGLRF 179 Query: 148 AWVYSIFG 155 VY +G Sbjct: 180 FTVYGPWG 187 >gi|254282748|ref|ZP_04957716.1| RmlD substrate binding domain superfamily protein [gamma proteobacterium NOR51-B] gi|219678951|gb|EED35300.1| RmlD substrate binding domain superfamily protein [gamma proteobacterium NOR51-B] Length = 293 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 10/202 (4%) Query: 83 AIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IA+A DS +++S+ V+ G + P E + +++ G+ E ++ Sbjct: 84 GIARATDS---HLLFLSSARVYSGQLQRPYKETDEPDAIDVSGRLLCEAEAILSDSQARV 140 Query: 143 VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL-IE 201 + +R ++S S +L +ER+ + G P ++AR + I + + Sbjct: 141 LTVRLGAIFSGRRSTRFTQLLDSIRERKPVLSSDQMRGNPVHTAEVARVVAGILDQVSVG 200 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +DT G++H + G +A F+E + A + +S R ++ P P Sbjct: 201 AADT---GLYHYCSLGDTGYYA-FSEAVI-ACASQFDEFSTA-REMLREIPEDEVTPFNR 254 Query: 262 CLDCSKLANTHNIRISTWKEGV 283 LDC+++ I+ W++ V Sbjct: 255 SLDCNRIRFQFGIQQLPWRDFV 276 >gi|120609737|ref|YP_969415.1| UDP-galactose 4-epimerase [Acidovorax citrulli AAC00-1] gi|120588201|gb|ABM31641.1| UDP-galactose 4-epimerase [Acidovorax citrulli AAC00-1] Length = 338 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 10/144 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGR-----PDI---DLLKPKDFASFFLSFSPDV 53 C+ + G L + C ++ RVGR PD+ D+ A F S D Sbjct: 16 CVALAEAGLPFLILDNFCNSRRSVLERVGRITGRVPDLVEGDVRDEGLLARIFAEHSIDA 75 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +I+ AA AV ++ EP + N G A+ +A + ++ S+ V+ + PI Sbjct: 76 VIHFAALKAVGESVREPLSYYDNNVAGTVALLRAMRKADVRTLVFSSSATVYGEPASLPI 135 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA 136 E P + N YG+SKL E+ +A Sbjct: 136 REDFPLSATNPYGQSKLMMEQVLA 159 >gi|88799032|ref|ZP_01114613.1| probable nucleotide sugar dehydratase [Reinekea sp. MED297] gi|88778259|gb|EAR09453.1| probable nucleotide sugar dehydratase [Reinekea sp. MED297] Length = 321 Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA A+ + P+ N +G I +AA G+ I+ ST V+ Sbjct: 68 DWVFHLAALIAIPYSYTAPDSYVDTNVKGTLNICQAALHNGVEQVIHTSTSEVYGTAQYV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK++G+ S+ N + Sbjct: 128 PIDEQHPLQPQSPYSASKMSGDHMALSFFNAF 159 >gi|225025805|ref|ZP_03714997.1| hypothetical protein EUBHAL_00030 [Eubacterium hallii DSM 3353] gi|224956889|gb|EEG38098.1| hypothetical protein EUBHAL_00030 [Eubacterium hallii DSM 3353] Length = 339 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 68 KLFEEEHPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|209551573|ref|YP_002283490.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537329|gb|ACI57264.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 327 Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 4/152 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G + + ++ + +R G P I DL FSPD +I+ A Sbjct: 19 CKTLSRAGMVPVTYDNLSTGHADSVRWG-PLIRADLADAATLRRTLAEFSPDCVIHCGAN 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ + P + N G+ + +A I I S+ G+ + PI E +P + Sbjct: 78 AYVGESVEMPRKYYRNNVVGSLTLLEACLDQDIDRIVFSSSCATYGVPASLPIREETPQH 137 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P+N YG++KL E + + Y I A Y Sbjct: 138 PVNPYGRTKLIFEMALEDFAAAYGIRFAALRY 169 >gi|312880559|ref|ZP_07740359.1| UDP-galactose 4-epimerase [Aminomonas paucivorans DSM 12260] gi|310783850|gb|EFQ24248.1| UDP-galactose 4-epimerase [Aminomonas paucivorans DSM 12260] Length = 326 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL P F + + +++ AA + V ++ +PE + +N G + + G+ Sbjct: 49 DLRDPAFLEGVFSRYPVEGVLHFAARSLVGESMSDPEGYYDVNLRGTLNLLATMRAHGVR 108 Query: 95 CIYIS-TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +S T V+ + PI E +P P N YG++KL E + Y + Y Sbjct: 109 RFVLSSTAAVYGDPTEQPISEEAPKVPTNTYGETKLFLEGALRRYRDAY 157 >gi|227892776|ref|ZP_04010581.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] gi|227865417|gb|EEJ72838.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] Length = 330 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 29/159 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL----------LKPK------DFAS 44 MK LVIG G I S V+ E++R G + L + PK D Sbjct: 1 MKVLVIGGAGYIG----SHAVR--ELVREGNDVVVLDALYTGHRKAVDPKAKFYQGDIED 54 Query: 45 FFL------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 FL D +++ AAY+ V ++ +P + N G ++ KA + G + Sbjct: 55 TFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLKAMNDAGTKYLVF 114 Query: 99 STDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 S+ G+ + PI E +P NP+N YG++K+ E+ +A Sbjct: 115 SSSAATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMA 153 >gi|149024991|ref|ZP_01836371.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP23-BS72] gi|147929484|gb|EDK80479.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP23-BS72] Length = 233 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHYAGEIVVSESIENPSKYFTANVAGMDQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTVSLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|239941877|ref|ZP_04693814.1| putative UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] gi|239988340|ref|ZP_04709004.1| putative UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 11379] gi|291445325|ref|ZP_06584715.1| UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] gi|291348272|gb|EFE75176.1| UDP-glucose 4-epimerase [Streptomyces roseosporus NRRL 15998] Length = 332 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ L S D +++ AA++ V ++ PE + N G A+ A G+ ++ ST Sbjct: 66 AARHLDPSYDGVLHFAAFSQVGESVVNPEKYWVNNVGGTTALLAAMREHGVRTLVFSSTA 125 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + +PI E PT P + YG SKLA + ++ + V LR V +G Sbjct: 126 ATYGEPVSSPITETDPTAPTSPYGASKLAVDHMISGEATAHGLAAVSLRYFNVAGAYGSC 185 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE I+V D + TP Sbjct: 186 GERHDPESHLIPLVLQVALGKRESINVYGDDYPTP 220 >gi|166031257|ref|ZP_02234086.1| hypothetical protein DORFOR_00944 [Dorea formicigenerans ATCC 27755] gi|166029104|gb|EDR47861.1| hypothetical protein DORFOR_00944 [Dorea formicigenerans ATCC 27755] Length = 343 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ N +G + A GI + +STD Sbjct: 68 KLFEEEHPDMVVNFAAESHVDRSIENPEVFLDTNIKGTAVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|255099389|ref|ZP_05328366.1| dTDP-glucose 4,6-dehydratase [Clostridium difficile QCD-63q42] Length = 327 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ + P++ N G + A+ G+ + ISTD V+ L Sbjct: 77 DIVVNFAAESHVDRSVENPDLFIKTNIIGTQVLLDASIKYGVKRYHQISTDEVYGDL--- 133 Query: 111 PID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 PID E S NP + Y SK + + V SY Y +L T Sbjct: 134 PIDRKDLFFTEQSSINPSSPYSASKASADLLVNSYYRTYGLLTT 177 >gi|311746708|ref|ZP_07720493.1| Cap5D protein [Algoriphagus sp. PR1] gi|126578382|gb|EAZ82546.1| Cap5D protein [Algoriphagus sp. PR1] Length = 636 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 19/127 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ K F SF P V+ + AAY V E+ PE A N G +A + + Sbjct: 350 DVRNKKKMKEVFRSFKPQVVFHAAAYKHVPMMENYPEEAVHANVMGTKILADLSVLTQVD 409 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAW 149 +++STD NP N+ G SK E V + N+ T + Sbjct: 410 KFVFVSTD--------------KAVNPTNVMGASKRTAEMYVQALNEYLERNHKKYHTKF 455 Query: 150 VYSIFGS 156 + + FG+ Sbjct: 456 ITTRFGN 462 >gi|33637043|gb|AAQ23681.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 337 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVI+N AA + VD++ +P+I N G A+ A + I + ISTD V+ L T Sbjct: 76 DVIVNFAAESHVDRSITDPDIFVKTNVLGTQALLDVAKANHIKKYVQISTDEVYGTLGET 135 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK G+ V +Y Y Sbjct: 136 GYFTEETPLAPNSPYSASKAGGDLLVRAYHETY 168 >gi|187778646|ref|ZP_02995119.1| hypothetical protein CLOSPO_02241 [Clostridium sporogenes ATCC 15579] gi|187772271|gb|EDU36073.1| hypothetical protein CLOSPO_02241 [Clostridium sporogenes ATCC 15579] Length = 326 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F+ D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFVQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEHNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTGPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|83647522|ref|YP_435957.1| nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] gi|83635565|gb|ABC31532.1| Nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] Length = 326 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 L+ DV+ N AA + + P+ +N G I + A G+ ++ ST V+ Sbjct: 68 LTKGVDVVFNLAALIGIPYSYTAPDTYVDVNIRGTVNICQGARLNGVGRLVHASTSEVYG 127 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+ E S+ N + Sbjct: 128 TAKYAPIDEKHPLQPQSPYSASKIGAESMALSFHNAF 164 >gi|15668384|ref|NP_247180.1| UDP-glucose 4-epimerase GalE [Methanocaldococcus jannaschii DSM 2661] gi|2494668|sp|Q57664|GALE_METJA RecName: Full=Putative UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1590951|gb|AAB98196.1| UDP-glucose 4-epimerase (galE) [Methanocaldococcus jannaschii DSM 2661] Length = 305 Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 6/122 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 ++ KD +V+I+ AA V + + P IN G I + I I Sbjct: 51 IRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKI 110 Query: 97 YI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWV 150 S V+ + P+DE P NPL+ YG SK GEE + Y Y ILR + V Sbjct: 111 VFASSGGAVYGEPNYLPVDENHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170 Query: 151 YS 152 Y Sbjct: 171 YG 172 >gi|254819211|ref|ZP_05224212.1| dTDP-glucose 4,6-dehydratase [Mycobacterium intracellulare ATCC 13950] Length = 331 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA + VD A + PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALEGPEPFLHTNVVGTFTILEAVRRYGVRLHHISTDEVYGDLELDD 131 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 F +P NP + Y +K A + V ++ +Y + T Sbjct: 132 PQRFTEATPYNPSSPYSATKAAADMLVRAWVRSYGVRAT 170 >gi|254501827|ref|ZP_05113978.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] gi|222437898|gb|EEE44577.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] Length = 297 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 21/170 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSF------SPDV 53 M L+ G GQ+ + ++S QD I +GR D+ + K F + L + D Sbjct: 1 MDILITGATGQLGRFIASRLRQDGHQISCLGRTPSDIPEDK-FVKWDLDDRKITLPAADA 59 Query: 54 IIN------PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 +I+ P Y D D+P N EG A+ +AA + G C+++S+ V+ G Sbjct: 60 LIHCALSHVPGKYR--DGEGDDPHGFIDRNVEGTQALFQAAKAAGAAQCVFLSSRAVYAG 117 Query: 107 LSRTPI-DEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYS 152 S + E SP +P + YGK K AGE E ++ ++R VY Sbjct: 118 ASEWGVLTEDSPVDPDSFYGKVKYAGELALEVLSDANFKGTVIRATGVYG 167 >gi|254246136|ref|ZP_04939457.1| Nucleoside-diphosphate-sugar epimerase [Burkholderia cenocepacia PC184] gi|124870912|gb|EAY62628.1| Nucleoside-diphosphate-sugar epimerase [Burkholderia cenocepacia PC184] Length = 321 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 49 FSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIPCIYI--STDYVF 104 + D +I+ AA V + E +P+ AF + N G +A AA G+ I S V Sbjct: 63 LAADCVIHLAARVHVMRDESPDPDAAFDATNVAGTLRLADAARHHGVRRIVFASSIKAVG 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS-IFGSNFL 159 +G P+ E +P + YG+SKL E ++A + + V++R VY +NFL Sbjct: 123 EGDGGIPLSEAFEPDPQDAYGRSKLRAERQLAQFGASVGLDVVVVRPPLVYGPAVRANFL 182 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 R + V P A+ R+II + Sbjct: 183 ----------RMMDAVARGMPLPLGAVSARRSIIYV 208 >gi|25028369|ref|NP_738423.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259507426|ref|ZP_05750326.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|23493654|dbj|BAC18623.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] gi|259164991|gb|EEW49545.1| UDP-glucose 4-epimerase [Corynebacterium efficiens YS-314] Length = 328 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 32/230 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRPDIDLL---KPKDFASFFL 47 MK LV G G + +++ V+ DV +I R P L +D A L Sbjct: 1 MKLLVTGGAGYVGSVCAAVLVERGHDVTVIDNFTTGNREAVPASATLVEGDVRDVADEVL 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + D +++ AA + V ++ D P + N + + A + G+ ++ ST + Sbjct: 61 AAGGFDGVVHFAARSLVGESVDHPADYWQHNMVTSLTLLDAMRAHGVDNLVFSSTAATYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSN- 157 + PI E PT P N YG SKLA + + SY Y + T A Y G N Sbjct: 121 EPEQVPITEDMPTAPTNPYGASKLAIDYAITSYARAYGLGATSLRYFNVAGAYGNIGENR 180 Query: 158 -----FLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 + +L++A RE I + D + PT+ R I I H+L E Sbjct: 181 EVETHLIPLVLQVALGHREKIFMFGDDW--PTADGTAVRDYIHI-HDLAE 227 >gi|310780550|ref|YP_003968882.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309749873|gb|ADO84534.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 323 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 22/168 (13%) Query: 1 MKCLVIGNNGQIAQS--------------LSSMCVQDVEII--RVGRPDIDLLKPKDFAS 44 M+ LV G G I L ++ +E++ R DL + + + Sbjct: 1 MRVLVTGGAGYIGSHAVVELLDGGYEVIILDNLETGHIELVDSRAKFYKADLREKESLRN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F DV++N AAY V ++ EP + N G + + + I + ST V Sbjct: 61 VFKKEKIDVVMNFAAYIKVGESVTEPNKYYENNTGGVLNLLEIMKEFNVKNIVFSSTAAV 120 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + +S + E + P+N YG SK EE + ++Y NYVI R Sbjct: 121 YGEVSGDDLVSESFDSQPINPYGMSKFMAEEIIKDSASAYNMNYVIFR 168 >gi|254517911|ref|ZP_05129967.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. 7_2_43FAA] gi|226911660|gb|EEH96861.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. 7_2_43FAA] Length = 349 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 10/109 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---------GIP 94 S F + D +++ AA + VD++ EPE+ N G + A + G+ Sbjct: 69 SLFEKYEIDYVVHFAAESHVDRSIKEPEVFAKTNVLGTVNLLSCAKNAWETEDGWRKGVK 128 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P +P + Y SK + V +Y + Y Sbjct: 129 FLHVSTDEVYGSLGETGYFMETTPLDPHSPYSASKAGSDMMVKAYGDTY 177 >gi|212640484|ref|YP_002317004.1| UDP-glucose 4-epimerase [Anoxybacillus flavithermus WK1] gi|212561964|gb|ACJ35019.1| UDP-glucose 4-epimerase [Anoxybacillus flavithermus WK1] Length = 338 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + D +++ AA + V ++ EP + N + + + G+ Sbjct: 64 DLGDRATLVRIFEKYPIDAVMHFAANSLVGESVAEPMKYYKNNVAATLTLLETMMAYGVK 123 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 I+ ST V+ + I E PTNP+N YG+SKL E +A +Y YV+LR Sbjct: 124 RFIFSSTAAVYGIPNVDVITEQCPTNPINPYGRSKLMIEHMLADFASAYDLRYVVLR 180 >gi|154483768|ref|ZP_02026216.1| hypothetical protein EUBVEN_01472 [Eubacterium ventriosum ATCC 27560] gi|149735259|gb|EDM51145.1| hypothetical protein EUBVEN_01472 [Eubacterium ventriosum ATCC 27560] Length = 339 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ F PD+++N AA + VD++ + PE+ + N G + A GI Sbjct: 58 IDICDRDAIYGLFEEEHPDMVVNFAAESHVDRSIENPEVFLNTNILGTAVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + V +Y Y Sbjct: 118 KRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|295398753|ref|ZP_06808766.1| capsular polysaccharide biosynthesis protein Cap5N [Aerococcus viridans ATCC 11563] gi|294973006|gb|EFG48820.1| capsular polysaccharide biosynthesis protein Cap5N [Aerococcus viridans ATCC 11563] Length = 282 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 14/139 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPA- 58 + L+ G N I S Q E +V + + + K D++ + D I++ A Sbjct: 3 RILITGQNSYIGTSFEEWVAQWPEDYKVDKISLRDNRWKSDDWSQY------DSILHVAG 56 Query: 59 -AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFS 116 A+ + DK+ ++ + +S+N + +A A + G+ I++S+ VF G + IDE + Sbjct: 57 IAHNSSDKSLED--LYYSVNRDLTEEVALKAKNDGVNHFIFLSSIIVF-GTKKECIDENT 113 Query: 117 PTNPLNIYGKSKLAGEEKV 135 +P N YG SKL E+++ Sbjct: 114 IPDPDNFYGDSKLQAEQRL 132 >gi|256848123|ref|ZP_05553567.1| UDP-glucose 4-epimerase [Lactobacillus coleohominis 101-4-CHN] gi|256715183|gb|EEU30160.1| UDP-glucose 4-epimerase [Lactobacillus coleohominis 101-4-CHN] Length = 331 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 23/157 (14%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 FL+ +++ AA++ V ++ EP F N G + +A GI I S+ Sbjct: 62 FLNEDIKAVVHFAAFSIVPESMSEPLKYFDNNTGGMITLLEAMRDFGIKYIVFSSTAATY 121 Query: 106 GL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG----- 155 G+ PI E P+N YG SKL E +A +Y +V LR +++ G Sbjct: 122 GIPEHMPIKETDSQKPINPYGLSKLMMEHMMAWADKAYGIKFVALR---YFNVAGAAPDG 178 Query: 156 ---------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + ++++A+ +R E+S+ D + TP Sbjct: 179 TIGEDHGPETHLVPIIMQVAQGKRPELSIFGDDYNTP 215 >gi|116247601|gb|ABJ90171.1| MoeS5 [Streptomyces ghanaensis ATCC 14672] Length = 282 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 30/227 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPD---------IDLLKPKDFASFFLS 48 M+ LV+G +G + + V DV RP+ DL P Sbjct: 1 MRVLVVGGSGFLGYEVLRRAVAAGWDVAATYRTRPEELPPVTWYRADLRDPGRMGEVLAR 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P +IN ++ A +++ A+GA +A A G +++S+D VF G Sbjct: 61 TRPAAVINASSGHA----------DWAVTADGAARLALEAARAGCRLVHVSSDAVFSGAD 110 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 +E P +P++ YG +K A E V ++RT+ + S ++ LA Sbjct: 111 VHYPEEALP-DPVSPYGAAKAAAETAVRVAVPEAAVVRTSLIVGHNRSAHEEAVHALAAG 169 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 RR + D P +A A+++IA SD S G+FH+ Sbjct: 170 RRAGVLFTDDVRCPVHVDDLASALLEIA-----ASDGS--GVFHVAG 209 >gi|294787276|ref|ZP_06752529.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens F0305] gi|315227166|ref|ZP_07868953.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens DSM 10105] gi|294484632|gb|EFG32267.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens F0305] gi|315119616|gb|EFT82749.1| dTDP-glucose 4,6-dehydratase [Parascardovia denticolens DSM 10105] Length = 401 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 + I++ AA + D+A +PE S N G + +AA I +ISTD V+ L S Sbjct: 135 EAIVHFAAESHNDRAIADPEPFISTNVVGTYRLLEAARVNKIRFHHISTDEVYGDLPLDS 194 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 R E SP P + Y SK A ++ V ++ Y Sbjct: 195 REKFSEVSPYRPSSPYSASKAASDQLVMAWQRTY 228 >gi|292492406|ref|YP_003527845.1| UDP-glucose 4-epimerase [Nitrosococcus halophilus Nc4] gi|291581001|gb|ADE15458.1| UDP-glucose 4-epimerase [Nitrosococcus halophilus Nc4] Length = 329 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 15/143 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 S + D +++ AA+T V ++ P ++ N + + + G+ S+ Sbjct: 62 SLLKEYQVDTVMHFAAHTVVPESVANPLKYYANNTCHTRNLLECCTAAGVKYFIFSSTAA 121 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGE---EKVASYTN-NYVILRTAWVYSIFGSNF 158 G TP + E +PT P+N YG SKL E ++ +N NYVILR +++ GS+ Sbjct: 122 TYGTPSTPLVTEDTPTAPINPYGTSKLMSEWMLRDLSQASNLNYVILR---YFNVAGSD- 177 Query: 159 LLSMLRLAKERRE----ISVVCD 177 R+ + RE I V C+ Sbjct: 178 --PTGRIGQSTREATLLIKVACE 198 >gi|284165444|ref|YP_003403723.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284015099|gb|ADB61050.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 353 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 8/111 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA V + D P +N EG + +AA + ++ ST ++ L Sbjct: 107 DVVVHMAAMAGVQRTLDNPVDTLEVNVEGTRTVLEAAVEASVDRVLFTSTSEMYGDLFEP 166 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSN 157 P E P P Y +K E V SY Y ILR ++++G N Sbjct: 167 PYREDGPIAPKTNYAVAKAVNERYVKSYCEAAGIPYTILR---YFNVYGPN 214 >gi|160890545|ref|ZP_02071548.1| hypothetical protein BACUNI_02987 [Bacteroides uniformis ATCC 8492] gi|156860277|gb|EDO53708.1| hypothetical protein BACUNI_02987 [Bacteroides uniformis ATCC 8492] Length = 347 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA + G+ + +STD Sbjct: 87 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALATGVQHVVALSTD--------- 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 138 -----KACAPINLYGATKLTS-DKLFTAANN 162 >gi|107021964|ref|YP_620291.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU 1054] gi|116688908|ref|YP_834531.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia HI2424] gi|105892153|gb|ABF75318.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU 1054] gi|116646997|gb|ABK07638.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia HI2424] Length = 321 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 19/156 (12%) Query: 49 FSPDVIINPAAYTAVDKAED-EPEIAF-SINAEGAGAIAKAADSIGIPCIYI--STDYVF 104 + D +I+ AA V + E +P+ AF + N G +A AA G+ I S V Sbjct: 63 LTADCMIHLAARVHVMRDESPDPDAAFDATNVAGTLRLADAARHHGVRRIVFASSIKAVG 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS-IFGSNFL 159 +G P+ E +P + YG+SKL E ++A + + V++R VY +NFL Sbjct: 123 EGDGGVPLSETFEPHPQDAYGRSKLRAERQLAQFGASVGLDVVVVRPPLVYGPAVRANFL 182 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 R + V P A+ R+II + Sbjct: 183 ----------RMMDAVARGMPLPLGAVSARRSIIYV 208 >gi|302872024|ref|YP_003840660.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302574883|gb|ADL42674.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 305 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDVWLDCSINVLGTVNLLEYCVKYKVKKFIFASSAAVYGEPKYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 E P P + YG SKL EE V + +N YVI R + VY Sbjct: 129 ENHPLRPESFYGLSKLTSEEYVRMFAHNFNFEYVIFRYSNVY 170 >gi|326778813|ref|ZP_08238078.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] gi|326659146|gb|EGE43992.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] Length = 332 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ L S D +++ AA++ V ++ PE + N G A+ A G+ ++ ST Sbjct: 66 AARHLDPSYDGVLHFAAFSQVGESVLNPEKYWVNNVGGTTALLAAMREHGVRTLVFSSTA 125 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + +PI E PT P + YG SKLA + ++ + V LR V +G Sbjct: 126 ATYGEPVSSPITETDPTAPTSPYGASKLAVDHMISGEATAHGLAAVSLRYFNVAGAYGSC 185 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE I+V D + TP Sbjct: 186 GERHDPESHLIPLVLQVALGKRESINVYGDDYPTP 220 >gi|294497805|ref|YP_003561505.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] gi|294347742|gb|ADE68071.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] Length = 326 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 20/163 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFASFFLS 48 LVIG G I L V+ E++ + R ID L KD S F + Sbjct: 3 LVIGGAGYIGSHLVKELVKTNEVVVLDNLSTGHRWAIDEKAVFVEGNLGNEKDLESVFTN 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 D +++ AA + V ++ +P + N + + + I+ ST + Sbjct: 63 HKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQTMMKHNVKKFIFSSTAATYGIP 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 S I E + TNP+N YG+SKL E+ +A +Y YV+LR Sbjct: 123 SVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVLR 165 >gi|256851512|ref|ZP_05556901.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260660935|ref|ZP_05861850.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|282932276|ref|ZP_06337714.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|297206325|ref|ZP_06923720.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] gi|256616574|gb|EEU21762.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260548657|gb|EEX24632.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|281303590|gb|EFA95754.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|297149451|gb|EFH29749.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] Length = 331 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Query: 40 KDF---ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 +DF +S F D I++ AA++ V ++ P F N G + +A + GI Sbjct: 53 RDFQFLSSVFSQEKVDGIVHFAAFSVVPESMKNPLKYFDNNTCGMVTLLEAMNQFGIKRI 112 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + + PI E P P N YG+SKLA E+ Sbjct: 113 VFSSTAATYGEPKQIPIKETDPQLPTNAYGESKLAMEK 150 >gi|114565797|ref|YP_752951.1| nucleoside-diphosphate-sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336732|gb|ABI67580.1| nucleoside-diphosphate-sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 310 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 +K +D + D++ + AA V + D+P + + G + + I + Sbjct: 57 IKDRDTLKQVFAGGFDLVYHLAASINVQDSIDDPRTTYENDVTGTFNVLEECRRQNIKML 116 Query: 97 YISTDYVFD-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 ++ST V++ L T I E P P + Y SKLAGE SY Y V++R Y Sbjct: 117 FMSTCMVYERSLDETGITEEHPVKPASPYAASKLAGEALTLSYYYAYGLPTVVVRPFNTY 176 Query: 152 SIF 154 F Sbjct: 177 GPF 179 >gi|284046863|ref|YP_003397203.1| UDP-glucose 4-epimerase [Conexibacter woesei DSM 14684] gi|283951084|gb|ADB53828.1| UDP-glucose 4-epimerase [Conexibacter woesei DSM 14684] Length = 328 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++ AAY V ++ PEI + N G+ + + G+ ++ ST V+ Sbjct: 67 DGALHFAAYALVAESVARPEIYYRNNVLGSLNLLDGLRAAGVQRLVFSSTCAVYGEPEVV 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 P+DE +PT P+N YG SKLA + +A Sbjct: 127 PMDETTPTRPVNSYGASKLAVDGMIA 152 >gi|307728802|ref|YP_003906026.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] gi|307583337|gb|ADN56735.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] Length = 303 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 8/150 (5%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ P++ + PD I++ AA + V D+P + +N G + +A + Sbjct: 51 RLRLDITSPENCRRVIETVRPDYIVHLAAISFV--GHDDPLDFYRVNVLGTLNLLEACAA 108 Query: 91 IG-IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 G P + S+ V+ ++ IDE P P+N Y SK A E V ++ + IL Sbjct: 109 TGHTPRKALIASSANVYGNVTSDAIDESFPLTPVNHYAASKAAMETMVHTWFDRLPILIV 168 Query: 148 -AWVYSIFG--SNFLLSMLRLAKERREISV 174 + Y+ G SNFL+ + RRE S+ Sbjct: 169 RPFNYTGRGQASNFLVPKIVEHFARREPSI 198 >gi|300313692|ref|YP_003777784.1| UDP-glucose 4-epimerase [Herbaspirillum seropedicae SmR1] gi|226726335|gb|ACO81756.1| GalE [Herbaspirillum seropedicae SmR1] gi|300076477|gb|ADJ65876.1| UDP-glucose 4-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 336 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + S F + +I+ A AV ++ ++P + + N G + +A + G+ Sbjct: 58 DIRNREQLESVLREFKCEAVIHFAGLKAVGESVEQPLMYYDNNVVGTVRLLEAMQATGVK 117 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 I + S+ V+ P+DE P + N YG+SK+ E+ + Y Sbjct: 118 TIVFSSSATVYGDPQYLPLDEAHPLSASNPYGRSKIVIEDMLRDY 162 >gi|218134414|ref|ZP_03463218.1| hypothetical protein BACPEC_02317 [Bacteroides pectinophilus ATCC 43243] gi|217989799|gb|EEC55810.1| hypothetical protein BACPEC_02317 [Bacteroides pectinophilus ATCC 43243] Length = 339 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 + F PDV++N AA + VD++ +P I N G G + A GI + +STD Sbjct: 68 ALFEKEKPDVVVNFAAESHVDRSITDPGIFLQTNIIGTGVLLDACRIYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ PL+ Y SK + + V +Y Y Sbjct: 128 VYGDL---PLDRPDLFFTEETPLHTSSPYSASKASADLLVMAYHRTY 171 >gi|87311330|ref|ZP_01093451.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] gi|87285910|gb|EAQ77823.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] Length = 348 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 72/202 (35%), Gaps = 42/202 (20%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+D +K F + ++N A+ E +P +A+ IN E + + Sbjct: 74 DVDGMK-----RLFDKYQFRAVLNCGGCCALKSCELDPSMAWRINFESVRNLLTVLEGSD 128 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA---- 148 + +S D V+ E PT+P+ IYGK+ A E + +LR + Sbjct: 129 TRLVQLSIDLVYSDKLGGGYLEHEPTDPVTIYGKTMAAAENLIQLERPESAVLRISLPMG 188 Query: 149 -----------WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 W+ S F N + ++ D+ TPT + R I + Sbjct: 189 VSFNGHAGAIDWIQSRFMKN------------KPATLYYDEIRTPTYTDCMNRVIDDVLG 236 Query: 198 NLIENSDTSLRGIFHMTADGGP 219 L GIFH GGP Sbjct: 237 R-------DLAGIFHA---GGP 248 >gi|297526866|ref|YP_003668890.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255782|gb|ADI31991.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 319 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ + AA V + P+I F+ N + +A + ++ S+ V+ Sbjct: 77 DVVFHYAANPEVRVSTTNPDIHFNENVVATFNLLEAMRKKDVRRLVFASSSSVYGEPEEI 136 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 P+DE +P P+++YG SK A E + +Y+ Y V+LR A V Sbjct: 137 PVDEGAPIRPVSVYGASKAACEALIHAYSRLYGIKSVVLRYANV 180 >gi|282900187|ref|ZP_06308143.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] gi|281194936|gb|EFA69877.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] Length = 341 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 95/245 (38%), Gaps = 54/245 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--------DVEIIRVG-------------RPDIDLLKP 39 MK LV G G + L + + D +VG DI + P Sbjct: 1 MKILVTGTEGYLGSLLPPLLIAKGHKVIGVDTGFYKVGWLYNGTEITVKTLNKDIRNINP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D D I++ A + + P I + IN G+ +A A ++G+ +Y+ Sbjct: 61 EDLEGV------DAIVHKAELSNDPTGQLAPHITYDINHLGSVRLANLAKTMGVRRFVYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG 155 S+ V+ + + E SP NP Y + K E + ++ +R A + FG Sbjct: 115 SSCSVYGIATDGDVTEESPVNPQTAYAECKTLVERDIKLLADDDFSPTFMRNA---TAFG 171 Query: 156 SN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAH 197 ++ L ++ LA +EI + D GTP AL I +AI+ I H Sbjct: 172 ASPRMRFDIVLNNLAGLAWTTKEIKMTSD--GTPWRPLVHALDICKAIVCVLEAPRDIIH 229 Query: 198 NLIEN 202 N + N Sbjct: 230 NQVFN 234 >gi|157736917|ref|YP_001489600.1| NAD-dependent epimerase/dehydratase family protein [Arcobacter butzleri RM4018] gi|157698771|gb|ABV66931.1| NAD-dependent epimerase/dehydratase family protein [Arcobacter butzleri RM4018] Length = 335 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N G + +A + IY S+ V+ + P+ E P N N YG Sbjct: 103 KDFPRTAFDVNISGTFNVLEACVKHKVKKLIYSSSASVYGDAVQVPMTEDHPFNNKNFYG 162 Query: 126 KSKLAGEEKVASYTNNY----VILRTAWVYS 152 +K+AGE +Y + Y V LR VY Sbjct: 163 ATKIAGEAMCTAYNDRYGLEIVGLRYMNVYG 193 >gi|222481362|ref|YP_002567598.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222454738|gb|ACM59001.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 315 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 4/105 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D + + AA ++V A +P A +N + A G ++ S+ V+ S P Sbjct: 81 DYVFHLAAISSVPGAMADPPRALDVNVSATADLLDLATDAGARVVFASSAAVYGDPSSVP 140 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 I E +P YG SKLAG+ V Y + + V LR VY Sbjct: 141 IGETDAKDPREPYGVSKLAGDHLVRGYADWKDLDTVALRLFNVYG 185 >gi|51473527|ref|YP_067284.1| dTDP-4-keto-L-rhamnose reductase. [Rickettsia typhi str. Wilmington] gi|51459839|gb|AAU03802.1| dTDP-4-keto-L-rhamnose reductase [Rickettsia typhi str. Wilmington] Length = 284 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ QD ++ R ++D+ Sbjct: 1 MKILILGVTGMLGNSMFRFLTQDSKFDVCATARNNAATLYFSKDLTNKLITNVDVANHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +PDV+IN ++P IN+ +A IG I+ISTD Sbjct: 61 LVEVLNKINPDVVINCIGLVKQLADVNDPLKVLPINSLLPHRLANLCGLIGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G R +E + ++YG+SK GE Sbjct: 121 CVFSG-KRGNYNESDFPDCDDLYGRSKFLGE 150 >gi|238026322|ref|YP_002910553.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Burkholderia glumae BGR1] gi|237875516|gb|ACR27849.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase, putative [Burkholderia glumae BGR1] Length = 297 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 5/113 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DLL + + + PDV+I+ AA V A + + N G + A S G Sbjct: 47 DLLDREAMGALMAACRPDVVIHLAAIAFV--AHGDVGAVYQTNIMGTRNLLDAITSAGCQ 104 Query: 94 --PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + S+ V+ R IDE P NP N Y SKLA E A +++ I Sbjct: 105 PRAVLVASSANVYGNTDRGVIDESVPPNPANDYAISKLATERVAALWSDRLPI 157 >gi|14277912|pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site gi|14277913|pdb|1HZJ|B Chain B, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site gi|1119217|gb|AAB86498.1| UDP-galactose-4-epimerase [Homo sapiens] gi|2947219|gb|AAC39645.1| UDP-galactose 4' epimerase [Homo sapiens] gi|1585500|prf||2201313A UDP galactose 4'-epimerase Length = 348 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNVVLLR 184 >gi|300215090|gb|ADJ79506.1| UDP-glucose 4-epimerase [Lactobacillus salivarius CECT 5713] Length = 308 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + +PD+ +I+ AA++ V ++ +P F N G + + + I Sbjct: 52 LADKDFMRKVFTENPDIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMNEFDIK 111 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E P P+N YG+SKL E+ + +Y +V LR Sbjct: 112 YIVFSSTAATYGIPEKMPIYEDDPQLPINPYGESKLMMEKIMRWADEAYGIKFVALR--- 168 Query: 150 VYSIFG--------------SNFLLSMLRLAK-ERREISVVCDQFGTP 182 +++ G ++ L +L++A ER ++ + D + TP Sbjct: 169 YFNVAGAKPDGSIGEDHHPETHLLPIVLQVAMGEREKLQIFGDDYNTP 216 >gi|107104558|ref|ZP_01368476.1| hypothetical protein PaerPA_01005636 [Pseudomonas aeruginosa PACS2] Length = 304 Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97 Query: 95 C--IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ G + PI E +P N Y SKLA E Sbjct: 98 GTFLYISSGDVYGQVGEAALPIHEELIPHPRNPYAVSKLAAE 139 >gi|237739462|ref|ZP_04569943.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 2_1_31] gi|229423070|gb|EEO38117.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 2_1_31] Length = 327 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 26/176 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 +++N G I + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNVNVIGTKNIVQVCEEKKLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + + +Y+I+R ++ I ++ + +L L K+ +++I + C + Sbjct: 145 AENIIKASNLDYIIIRPRGLFGIGDTSIIPRLLELNKKMGIPLFVDGKQKIDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 +L++A +EN + S R I+++T +G P+ + + F E G Sbjct: 203 VAYSLRLA----------LENKEHS-REIYNIT-NGEPIEFKEILTLFFNEMGTEG 246 >gi|159186327|ref|NP_355862.2| NAD-dependent epimerase/dehydratase [Agrobacterium tumefaciens str. C58] gi|159141461|gb|AAK88647.2| NAD-dependent epimerase/dehydratase [Agrobacterium tumefaciens str. C58] Length = 356 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DI + P D F D +I+ AA + + PEI + IN G+ A+AA G Sbjct: 55 DIRDITPADMEGF------DAVIHLAALSNDPLSNLNPEITYEINYRGSVRAAQAAKQAG 108 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTA 148 + I+ S+ + ++E + P++ YG SK+ E ++AS + + V +R A Sbjct: 109 VKRFIFASSCSNYGAAGEGLVNETAELKPVSAYGTSKVLAEREIASLASPGFSPVYMRPA 168 Query: 149 WVYSI 153 Y + Sbjct: 169 TAYGL 173 >gi|330873337|gb|EGH07486.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 298 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMATELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYI-STDYVFDGLSR 109 ++++ AA V E + +N G + +A D+ G C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAAEAFYQVNLIGTRNLLEAIDACGKAPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLL 160 +DE +P P N Y SKLA E +AS + + + TA ++ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLA-MEYMASLWHARLPIVTARPFNYTGVGQAENFLL 178 >gi|210608814|ref|ZP_03288010.1| hypothetical protein CLONEX_00189 [Clostridium nexile DSM 1787] gi|210152880|gb|EEA83886.1| hypothetical protein CLONEX_00189 [Clostridium nexile DSM 1787] Length = 633 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 22/123 (17%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K S + PD++ + AA+ V ED P A N G A+AAD G+ + I Sbjct: 342 KRIESVMELYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTYKTARAADKYGVKKFVLI 401 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE---EKVASYTNN-YVILRTAWVYSIF 154 STD NP NI G SK E + + Y+N +V +R ++ Sbjct: 402 STD--------------KAVNPTNIMGASKRMCEMIIQTFSRYSNTEFVAVRFG---NVL 444 Query: 155 GSN 157 GSN Sbjct: 445 GSN 447 >gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 342 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ +P I N +G + AA G+ I ISTD V+ L T Sbjct: 77 DAVVNFAAESHVDRSIADPGIFIKTNVQGTQVLLDAAKKYGVKKYIQISTDEVYGTLGET 136 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V +Y Y Sbjct: 137 GYFTETTPLAPNSPYSASKAGADLLVRAYHETY 169 >gi|284929423|ref|YP_003421945.1| UDP-galactose 4-epimerase [cyanobacterium UCYN-A] gi|284809867|gb|ADB95564.1| UDP-galactose 4-epimerase [cyanobacterium UCYN-A] Length = 330 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 6/132 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V DVE+I +G + LL K FA+ + +++ AA+ AV ++ P + N G Sbjct: 47 VLDVELI-IGDTNDRLLLDKIFATRNIC----AVMHFAAFLAVGESVHHPATYYKNNVVG 101 Query: 81 AGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A S I I+ ST ++ + PI E P NPLN Y SK E+ + + Sbjct: 102 TLTLLEAMVSANINKLIFSSTCSIYGISNNIPITENHPNNPLNPYASSKYMVEQILKDFD 161 Query: 140 NNYVILRTAWVY 151 Y + + Y Sbjct: 162 QAYNLKSVVFRY 173 >gi|209545108|ref|YP_002277337.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|209532785|gb|ACI52722.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 356 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ + F + PD +++ AA + VD++ D P + N G + A Sbjct: 58 DITDGAAMRAVFAAHQPDAVMHLAAESHVDRSIDGPGVFVQTNVVGTYTLLDTAREYWSG 117 Query: 89 -DSIGIPCI---YISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D+ G ++STD VF L P E +P +P + Y SK A + V ++ + Y Sbjct: 118 LDAAGRAAFRFHHVSTDEVFGTLQPGDAPFTESTPYDPRSPYSASKAASDHLVRAWQHTY 177 >gi|78188495|ref|YP_378833.1| UDP-glucose 4-epimerase [Chlorobium chlorochromatii CaD3] gi|78170694|gb|ABB27790.1| UDP-galactose 4-epimerase [Chlorobium chlorochromatii CaD3] Length = 325 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 2/105 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+L P + ++ D I AA A ++ P+ N GA I A + G+ Sbjct: 51 DILHPAQLHAV-MAEGFDGCIYLAALKAAGQSMLHPDAYAEANIGGAINILNQAAATGLG 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 I+ S+ V+ + PIDE PT P N YG +KLA E+ +A Y Sbjct: 110 TIIFSSSAAVYGSPNYLPIDEAHPTAPENFYGYTKLAIEQLLAWY 154 >gi|308070305|ref|YP_003871910.1| UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] gi|305859584|gb|ADM71372.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] Length = 329 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + F S D +I+ AA + V ++ P + N G ++ +A G+ Sbjct: 50 DLRDKELLSKLFSENSIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMKDAGVR 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST + + PI+E T P N+YG++KL E ++ + YV LR Sbjct: 110 RIVFSSTAATYGEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYVSLRYFN 169 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGTP 182 A G S+ + +L+ A K+R I+V + + TP Sbjct: 170 AAGAHESGKIGEDHRPESHLIPLVLQTALKQRPHIAVFGEDYATP 214 >gi|317050407|ref|YP_004111523.1| GDP-mannose 4,6-dehydratase [Desulfurispirillum indicum S5] gi|316945491|gb|ADU64967.1| GDP-mannose 4,6-dehydratase [Desulfurispirillum indicum S5] Length = 344 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI- 91 + DL+ + PD + N A + V + D+P SI GA + +A I Sbjct: 58 EYDLIDQANAIQLIGRLRPDEVYNLGAQSFVGVSFDQPIATASITGIGAVHLLEAIRIID 117 Query: 92 -GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 GI ST +F + P DE +P P + YG +KL +Y +Y I Sbjct: 118 PGIRYYQASTSEMFGKVQAVPQDELTPFYPRSPYGAAKLYAHWMTVNYRESYGIF 172 >gi|224541188|ref|ZP_03681727.1| hypothetical protein CATMIT_00341 [Catenibacterium mitsuokai DSM 15897] gi|224525833|gb|EEF94938.1| hypothetical protein CATMIT_00341 [Catenibacterium mitsuokai DSM 15897] Length = 635 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 16/116 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F P+V+ + AA+ V ED P A N G + +AAD + + ISTD Sbjct: 372 ALFNELRPEVVYHAAAHKHVPLMEDSPNEAIKNNVFGTLNVVRAADKYHVKRFVQISTD- 430 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSN 157 NP NI G SK E + +Y+ + + TA + ++ GSN Sbjct: 431 -------------KAVNPTNIMGASKRMCEMIIQAYSRHSRTVFTAVRFGNVLGSN 473 >gi|300854186|ref|YP_003779170.1| putative nucleoside-diphosphate-sugar epimerase [Clostridium ljungdahlii DSM 13528] gi|300434301|gb|ADK14068.1| predicted nucleoside-diphosphate-sugar epimerase [Clostridium ljungdahlii DSM 13528] Length = 336 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC ++ ST V+D + IDE P P++ YG SK+A E V SY N Y V++R Sbjct: 135 PCKVVFTSTCMVYDVSGQEGIDEKHPVKPVSPYGGSKIAAENMVLSYYNAYKLPTVVVRP 194 Query: 148 AWVYSIF 154 Y F Sbjct: 195 FNTYGPF 201 >gi|261416357|ref|YP_003250040.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372813|gb|ACX75558.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326993|gb|ADL26194.1| dTDP-4-dehydrorhamnose reductase-like protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 359 Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 7/169 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D + + F F +I+ + A+ E +P + +N A A Sbjct: 62 VDAEETERLGELFEKFRFGTVIDASGNCALKACECDPARSRLLNYSQGVDAATFAARYNA 121 Query: 94 PCIYISTDYVFDGLSRT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 I IS D VF G +T P E P +P++ YGK + E+ + + + VILR Sbjct: 122 TLIRISADMVFSGDEKTKPNRPYVETDPKDPIHNYGKHQAEAEDAITAIKPDVVILRVPL 181 Query: 150 V--YSIFGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI 195 Y+ G + + + R ++ D+F P S + R + I Sbjct: 182 PMDYAPGGCAGAIDWITYRFRPGRPATLFTDEFRNPLSGPDLCRTVQYI 230 >gi|317132490|ref|YP_004091804.1| dTDP-glucose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] gi|315470469|gb|ADU27073.1| dTDP-glucose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] Length = 339 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + P I N G G + A+ +G+ + ISTD Sbjct: 68 DLFRKEKPDMVVNFAAESHVDRSIENPGIFLQTNILGTGVLMDASREVGVQRYHQISTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ PL+ Y SK + +Y + Sbjct: 128 VYGDL---PLDRPDLMFTEETPLHTSSPYSSSKAGADLLALAYHRTF 171 >gi|144973|gb|AAA23297.1| ORF3 [Corynebacterium diphtheriae] gi|144977|gb|AAA23300.1| open reading frame [Corynebacterium diphtheriae PW8] Length = 328 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 22/188 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDIDLLKP-------KDFASFFL 47 MK LV G G + S++ ++ V+ + G D L KD A L Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGATFVEGDIKDVAENVL 60 Query: 48 SF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 S S D +++ AA + V ++ ++P+ + N A+ A + I S+ G Sbjct: 61 SSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIVFSSTAATYG 120 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLR 164 T PI E +PT+P N YG +KL+ + + SY + Y T+ Y ++ G+ L+ Sbjct: 121 EPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGAYGLVG--- 177 Query: 165 LAKERREI 172 E REI Sbjct: 178 ---ENREI 182 >gi|270297040|ref|ZP_06203239.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. D20] gi|270273027|gb|EFA18890.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. D20] Length = 340 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA + G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALATGVQHVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|313472413|ref|ZP_07812905.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|239529717|gb|EEQ68718.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] Length = 334 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K +S F D I++ AA++ V ++ P F N G + +A GI Sbjct: 51 DIRDFKFLSSVFSQEKVDGIVHFAAFSVVPESMKNPLKYFDNNTCGMVTLLEAMKQFGIK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + + PI E P P N YG+SKLA E+ Sbjct: 111 RIVFSSTAATYGEPKQIPIKETDPQIPTNAYGESKLAMEK 150 >gi|38234000|ref|NP_939767.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae NCTC 13129] gi|38605712|sp|P33119|GALE_CORDI RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|38200262|emb|CAE49946.1| UDP-glucose 4-epimerase [Corynebacterium diphtheriae] Length = 328 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 22/188 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDIDLLKP-------KDFASFFL 47 MK LV G G + S++ ++ V+ + G D L KD A L Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGATFVEGDIKDVADNVL 60 Query: 48 SF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 S S D +++ AA + V ++ ++P+ + N A+ A + I S+ G Sbjct: 61 SSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVRNIVFSSTAATYG 120 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLR 164 T PI E +PT+P N YG +KL+ + + SY + Y T+ Y ++ G+ L+ Sbjct: 121 EPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGAYGLVG--- 177 Query: 165 LAKERREI 172 E REI Sbjct: 178 ---ENREI 182 >gi|194335038|ref|YP_002016898.1| UDP-glucose 4-epimerase [Prosthecochloris aestuarii DSM 271] gi|194312856|gb|ACF47251.1| UDP-glucose 4-epimerase [Prosthecochloris aestuarii DSM 271] Length = 321 Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 18/155 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDI---------DLLKPKDFAS 44 MK LVIG G I ++ + + V R ++ D+++P D Sbjct: 1 MKILVIGGAGYIGSHVARAFLDSGYSVTVFDNLATGARENLFEEAQFIHGDIMQP-DHLR 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYV 103 ++ D ++ AA A ++ +P + N G I A GI I+ S+ V Sbjct: 60 KAMAHGFDACVHLAALKAAGQSMTDPGSYATANICGTVNILNALVEAGIQTLIFSSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 F S PIDE P NP N YG +KL E +A Y Sbjct: 120 FGSPSFLPIDEDHPKNPENFYGFTKLEIERLLAWY 154 >gi|325169023|ref|YP_004285769.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] gi|325052898|dbj|BAJ83232.1| dTDP-glucose 4,6-dehydratase [Acidiphilium multivorum AIU301] Length = 352 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD----SIGIPC------ 95 F + PD++++ AA + VD++ D P N G + +AA ++ P Sbjct: 70 FEAHRPDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRF 129 Query: 96 IYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L P E +P +P + Y SK A + V ++ + Y Sbjct: 130 HHISTDEVFGALEPGDPPFTETTPYDPRSPYAASKAASDHLVRAWQHTY 178 >gi|317130376|ref|YP_004096658.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] gi|315475324|gb|ADU31927.1| dTDP-glucose 4,6-dehydratase [Bacillus cellulosilyticus DSM 2522] Length = 332 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + +F S D +++ AA + VD++ +PE+ N G + AA + Sbjct: 61 LDIADREKVMKYFESEKFDFVVHFAAESHVDRSITDPEVFVRTNVMGTQVLLDAAKEHSV 120 Query: 94 -PCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L P E +P P + Y SK A + V SY + Sbjct: 121 SKFLHVSTDEVYGELDFNPNTFFTEDTPLQPNSPYSASKAASDLLVRSYHETF 173 >gi|261821814|ref|YP_003259920.1| NAD-dependent epimerase/dehydratase [Pectobacterium wasabiae WPP163] gi|261605827|gb|ACX88313.1| NAD-dependent epimerase/dehydratase [Pectobacterium wasabiae WPP163] Length = 342 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 10/114 (8%) Query: 50 SPDVIINPAAYTAVDKAEDEPE------IAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 +PD++ N A + ++P + +IN EGA +A A GI IY+S+ Sbjct: 61 TPDILHNVEAVIDLAGLSNDPAAQISSALTHAINYEGACHLANTAKKAGIQRYIYMSSAS 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVYSI 153 V+ T DE + +P ++Y + KL E ++ T + VILR A V+ + Sbjct: 121 VYGRSGSTSADEETECHPQSLYAELKLNVERELLRLRDTTFHPVILRNATVFGL 174 >gi|311898005|dbj|BAJ30413.1| putative UDP-glucose 4-epimerase [Kitasatospora setae KM-6054] Length = 319 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ L S D +++ AA + V ++ +PE + N G+ + A G+ ++ ST Sbjct: 56 AAEVLDPSFDGVLHFAASSQVGESVADPEKYWRNNVAGSLELVTAMRKAGVGTLVFSSTA 115 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIF 154 V+ PI E + T+P N YG +KLA + + S + V LR A Y F Sbjct: 116 AVYGEPEEVPIKETARTSPTNTYGATKLAVDHLITSEATAHGLAAVSLRYFNVAGAYGRF 175 Query: 155 G-----SNFLLSMLRLAK--ERREISVVCDQFGTP 182 G + L+ ++ A +R +I+V D + TP Sbjct: 176 GERHEPESHLIPLVFQAALGQRPDIAVFGDDYPTP 210 >gi|169627607|ref|YP_001701256.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium abscessus ATCC 19977] gi|169239574|emb|CAM60602.1| Probable UDP-glucose 4-epimerase GalE1 [Mycobacterium abscessus] Length = 310 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY--I 98 D + +SP+VI + AA V + +P+ S+N G +A+AA G+ I Sbjct: 61 DLDAVVAEYSPEVIFHLAAQIDVRHSVADPQFDSSVNVVGTVRLAEAARKAGVRKIVHTS 120 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S ++ + P E PT+P + Y K+AGE + ++ + Y Sbjct: 121 SGGSIYGTPKQIPTSETVPTDPHSPYAAGKVAGEIYLNTFRHLY 164 >gi|330967166|gb|EGH67426.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 298 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 19/175 (10%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMATELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYI-STDYVFDGLSR 109 ++++ AA V E + +N G + +A D+ G C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAAEAFYQVNLIGTRNLLEAIDACGKAPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLL 160 +DE +P P N Y SKLA E +AS + + + TA ++ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLA-MEYMASLWHARLPIVTARPFNYTGVGQAENFLL 178 >gi|319783042|ref|YP_004142518.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168930|gb|ADV12468.1| NAD-dependent epimerase/dehydratase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 335 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 18/155 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE------IIRVGRP--------DIDLLKPKDFASFF 46 M+ ++ G +G + + L+ V D E I++ P D+ P A+ Sbjct: 1 MRHMIFGGDGFVGRHLAPKLVADGEEVVVADIVKSDLPHYRSVRFIQCDVTDPASVAAIG 60 Query: 47 LSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 L + D++ N +A + + + F +N G I +A D G ++ +TD + Sbjct: 61 LK-ADDMVYNLSAKMLSPIQVRAKRHDFFFPVNFHGTEHIMQAMDGAGASKLVHYTTDMI 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + P+ E P PL YG SK EE A + Sbjct: 120 YGHTVTQPMTEEHPVAPLGEYGWSKQKTEELAAEW 154 >gi|162149148|ref|YP_001603609.1| dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|161787725|emb|CAP57321.1| putative dTDP-glucose 4,6-dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 341 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 12/111 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DSIGIPCI 96 + F + PD +++ AA + VD++ D P + N G + A D+ G Sbjct: 52 AVFAAHQPDAVMHLAAESHVDRSIDGPGVFVQTNVVGTYTLLDTAREYWSGLDAAGRAAF 111 Query: 97 ---YISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++STD VF L P E +P +P + Y SK A + V ++ + Y Sbjct: 112 RFHHVSTDEVFGTLQPGDAPFTESTPYDPRSPYSASKAASDHLVRAWQHTY 162 >gi|33591368|ref|NP_879012.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis Tohama I] gi|33571010|emb|CAE40489.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis Tohama I] gi|332380769|gb|AEE65616.1| dTDP-glucose 4,6-dehydratase [Bordetella pertussis CS] Length = 353 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS----------IGIPCIYIST 100 P I+N AA + VD+A P+ N G + +AA + +++ST Sbjct: 74 PRAIVNFAAESHVDRAIRAPDAFVQTNVVGTFTLLEAARAYCTEQDAAAAAAFRFLHVST 133 Query: 101 DYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D V+ L+ P E P P N Y SK A + V SY + Y Sbjct: 134 DEVYGSLAPQAAPFTETHPYQPNNPYSASKAASDHMVRSYRHTY 177 >gi|191637548|ref|YP_001986714.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Lactobacillus casei BL23] gi|227534349|ref|ZP_03964398.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239629595|ref|ZP_04672626.1| UDP-glucose 4-epimerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065713|ref|YP_003787736.1| UDP-glucose 4-epimerase [Lactobacillus casei str. Zhang] gi|6225406|sp|O84903|GALE_LACCA RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|3201657|gb|AAC19329.1| UDP-galactose 4-epimerase [Lactobacillus casei] gi|190711850|emb|CAQ65856.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Lactobacillus casei BL23] gi|195928078|gb|ACG55695.1| GalE [Lactobacillus casei] gi|227187966|gb|EEI68033.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239528281|gb|EEQ67282.1| UDP-glucose 4-epimerase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438120|gb|ADK17886.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Lactobacillus casei str. Zhang] gi|327381594|gb|AEA53070.1| UDP-glucose 4-epimerase [Lactobacillus casei LC2W] gi|327384760|gb|AEA56234.1| UDP-glucose 4-epimerase [Lactobacillus casei BD-II] Length = 331 Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N G + +A + GI ++ ST + + Sbjct: 68 DGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E P P N YG+SKLA E+ + +Y +V LR Sbjct: 128 PIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALR 167 >gi|319650316|ref|ZP_08004460.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] gi|317397995|gb|EFV78689.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] Length = 324 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYVF 104 FL+ PD +I+ AA +V + P++ N G + A I+ ST ++ Sbjct: 77 FLAEKPDYVIHQAAQVSVSNSLIHPKLDGESNIIGTINLLNACVRHQTKKFIFASTAALY 136 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 + IDE P +P++ YG SKL E + +++ +Y ILR + VY + Sbjct: 137 GNPNYLSIDEEHPVSPISFYGLSKLNAESYIKLFSDLYGLSYTILRYSNVYGM 189 >gi|317478957|ref|ZP_07938103.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. 4_1_36] gi|316904866|gb|EFV26674.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. 4_1_36] Length = 340 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA + G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALATGVQHVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|297582745|ref|YP_003698525.1| UDP-glucose 4-epimerase [Bacillus selenitireducens MLS10] gi|297141202|gb|ADH97959.1| UDP-glucose 4-epimerase [Bacillus selenitireducens MLS10] Length = 333 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 23/168 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F S + + +++ AA + V + +EP + N GA + K G+ Sbjct: 51 DLRDEEALERVFNSHNIESVMHFAADSLVGVSMNEPLAYYDNNVYGALCLLKKMKKHGVK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAW 149 ++ ST + PI E TNP N YG++KLA E + ++ YV+LR Sbjct: 111 RIVFSSTAATYGEPDEVPITEEMATNPTNPYGETKLAIERMMKWADEAHEIRYVVLR--- 167 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ + +L++A +RE I V D + TP Sbjct: 168 YFNVAGAHPEKDIGEDHRPETHLIPIILQVALGQREKIMVFGDDYDTP 215 >gi|284047953|ref|YP_003398292.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus fermentans DSM 20731] gi|283952174|gb|ADB46977.1| dTDP-glucose 4,6-dehydratase [Acidaminococcus fermentans DSM 20731] Length = 339 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ PEI N G + A GI + +STD Sbjct: 68 GLFEEEHPDIVVNFAAESHVDRSILNPEIFLETNIIGTSVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ T P++ Y SK + V +Y Y Sbjct: 128 VYGDL---PLDRPDLFFTETTPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|262277577|ref|ZP_06055370.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HIMB114] gi|262224680|gb|EEY75139.1| NAD-dependent epimerase/dehydratase [alpha proteobacterium HIMB114] Length = 312 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 15/192 (7%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 +F SF VII AA E + A+ IN + I S I +T+ Sbjct: 66 NFLESFG--VIIPLAALVGAPICEANQKAAYEINTKSIQHIVNNISS-NTKIILPNTNSG 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 + DE SP NP++IYGKSK+ E V S+ N+ + LR A V+ + L +L Sbjct: 123 YGIGGSKYCDESSPLNPISIYGKSKVESERIVMSHKNS-ISLRLATVFGM-SQRMRLDLL 180 Query: 164 -----RLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 A E+ + +F L +ARA IEN D +F++ + Sbjct: 181 VNHFVSEAINDNEVEIFEGKFMRNYVYILDVARAFCY----CIENFDKMKNNVFNLGLED 236 Query: 218 GPVSWADFAEYI 229 +S D A I Sbjct: 237 VNLSKIDLANEI 248 >gi|20559811|gb|AAM27586.1|AF498403_5 ORF_5; similar to NAD dependent epimerase/dehydratase f [Pseudomonas aeruginosa] Length = 326 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ + AA A+ + P+ N +G I +AA G+ ++ ST V+ Sbjct: 73 DVVFHLAALIAIPYSYVAPDSYLETNVKGVLNICQAALENGVQRVVHTSTSEVYGTAQYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + S+ N + Sbjct: 133 PIDEKHPLQPQSPYSASKIAADAMAMSFFNAF 164 >gi|295703182|ref|YP_003596257.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] gi|294800841|gb|ADF37907.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] Length = 326 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 20/163 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFASFFLS 48 LVIG G I L V+ E++ + R ID L KD S F + Sbjct: 3 LVIGGAGYIGSHLVKELVKTNEVVVLDNLSTGHRWAIDEKAVFVEGNLGNEKDLESVFAN 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 D +++ AA + V ++ +P + N + + + I+ ST + Sbjct: 63 HKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQTMMKHNVKKFIFSSTAATYGIP 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 S I E + TNP+N YG+SKL E+ +A +Y YV+LR Sbjct: 123 SVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVLR 165 >gi|116249844|ref|YP_765682.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) [Rhizobium leguminosarum bv. viciae 3841] gi|115254492|emb|CAK05566.1| putative UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) [Rhizobium leguminosarum bv. viciae 3841] Length = 327 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 4/152 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C + G I + ++ + +R G P I +L FSPD +I+ A Sbjct: 19 CKALSRAGMIPVTYDNLSTGHADSVRWG-PLIRAELADAAALRRTLAEFSPDCVIHCGAN 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 V ++ + P + N G+ + +A I I S+ G+ + PI E SP + Sbjct: 78 AYVGESVEMPRKYYRNNVVGSLTLLEACLDQDIDRIVFSSSCATYGVPASLPIREESPQH 137 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P+N YG++KL E + + Y I A Y Sbjct: 138 PVNPYGRTKLIFEMALEDFAAAYGIRFAALRY 169 >gi|78222698|ref|YP_384445.1| UDP-galactose 4-epimerase [Geobacter metallireducens GS-15] gi|78193953|gb|ABB31720.1| UDP-galactose 4-epimerase [Geobacter metallireducens GS-15] Length = 330 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F F PD +++ AA V+++ P + + N G + G+ Sbjct: 50 DLEDRALLEKVFREFRPDAVMHFAASIQVEESVRRPLLYYGNNTAGTLNLLDVMVRTGVR 109 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 C ++ ST V+ P+ E +P P+N YG SK E+ +A Sbjct: 110 CLVHSSTAAVYGIPDVVPVAETAPLAPINPYGSSKAMVEKILA 152 >gi|120555542|ref|YP_959893.1| dTDP-glucose 4,6-dehydratase [Marinobacter aquaeolei VT8] gi|120325391|gb|ABM19706.1| dTDP-glucose 4,6-dehydratase [Marinobacter aquaeolei VT8] Length = 360 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 10/119 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA--------GAIA 85 ID+ A + P I++ AA + VD++ EPE N G G Sbjct: 56 IDIRDAAAVAGVLERYHPRAILHFAAESHVDRSIKEPEAFLQTNVMGTFNLLNSALGIWN 115 Query: 86 KAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + S +++STD V+ L RT E P P + Y SK A + V ++ + Y Sbjct: 116 QDGQSERFRFLHVSTDEVYGSLGRTDPAFSEKHPYQPNSPYSASKAASDHLVRAWHHTY 174 >gi|184155877|ref|YP_001844217.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] gi|183227221|dbj|BAG27737.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] Length = 310 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + DV++N AA + VD++ ++P S N G + A + Sbjct: 59 DIRDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRARVR 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE--EKVASYT--NNYVILRTAWV 150 + +STD V+ ++ DE +P P + Y +K + + A +T + VI R+A Sbjct: 119 LVQVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANN 178 Query: 151 Y 151 Y Sbjct: 179 Y 179 >gi|170692123|ref|ZP_02883287.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M] gi|170143407|gb|EDT11571.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M] Length = 303 Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 8/150 (5%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ P++ + PD I++ AA + V D+P + +N G + +A + Sbjct: 51 RLRLDITSPENCRHVMETVRPDYIVHLAAISFV--GHDDPLDFYRVNVIGTLNLLEACAA 108 Query: 91 IG-IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL-R 146 G P + S+ V+ ++ IDE P P+N Y SK A E V ++ IL Sbjct: 109 TGHTPRKVLIASSANVYGNVTSDAIDESFPLTPVNHYAASKAAMETMVHTWFERLPILIA 168 Query: 147 TAWVYSIFG--SNFLLSMLRLAKERREISV 174 + Y+ G SNFL+ + RRE S+ Sbjct: 169 RPFNYTGRGQASNFLVPKIVEHFARREPSI 198 >gi|312134989|ref|YP_004002327.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] gi|311775040|gb|ADQ04527.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] Length = 305 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDVYLDCSINVLGTVNLLEYCVKYKVKKFIFASSAAVYGEPKYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 E P P + YG SKL EE + + +N YVI R + VY Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIRMFAHNFNFGYVIFRYSNVY 170 >gi|56118217|ref|NP_001008217.1| UDP-glucose 4-epimerase [Homo sapiens] gi|56237023|ref|NP_000394.2| UDP-glucose 4-epimerase [Homo sapiens] gi|189083684|ref|NP_001121093.1| UDP-glucose 4-epimerase [Homo sapiens] gi|68056598|sp|Q14376|GALE_HUMAN RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|8569511|pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ gi|8569512|pdb|1EK6|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase Complexed With Nadh And Udp-Glucose gi|8569513|pdb|1EK6|B Chain B, Structure Of Human Udp-Galactose 4-Epimerase Complexed With Nadh And Udp-Glucose gi|4581414|emb|CAB40159.1| UDP-galactose-4-epimerase [Homo sapiens] gi|12654859|gb|AAH01273.1| UDP-galactose-4-epimerase [Homo sapiens] gi|34194613|gb|AAH50685.2| UDP-galactose-4-epimerase [Homo sapiens] gi|77819933|gb|ABB04109.1| UDP galactose 4'-epimerase [Homo sapiens] gi|77819935|gb|ABB04110.1| UDP galactose 4'-epimerase [Homo sapiens] gi|123981700|gb|ABM82679.1| UDP-galactose-4-epimerase [synthetic construct] gi|123996517|gb|ABM85860.1| UDP-galactose-4-epimerase [synthetic construct] gi|189067311|dbj|BAG37021.1| unnamed protein product [Homo sapiens] Length = 348 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|320100841|ref|YP_004176433.1| NAD-dependent epimerase/dehydratase [Desulfurococcus mucosus DSM 2162] gi|319753193|gb|ADV64951.1| NAD-dependent epimerase/dehydratase [Desulfurococcus mucosus DSM 2162] Length = 321 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 11/121 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA---ADSI 91 DL++ ++ F D++ + AA V + EP I F N + +A +D Sbjct: 59 DLVREGEWVKAFRDV--DIVFHYAANPEVRVSTVEPRIHFDNNVVATFNVLEAMRVSDVK 116 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 GI ++ S+ V+ S P E P P+++YG SKLA E + +Y Y +ILR Sbjct: 117 GI--VFASSSTVYGEPSVIPTPEDHPLKPISVYGASKLASEALIQAYCELYGFKALILRY 174 Query: 148 A 148 A Sbjct: 175 A 175 >gi|308071020|ref|YP_003872625.1| dTDP-glucose 4,6-dehydratase [Paenibacillus polymyxa E681] gi|305860299|gb|ADM72087.1| dTDP-glucose 4,6-dehydratase [Paenibacillus polymyxa E681] Length = 339 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ EPE+ N G + AA + + +STD V+ L T Sbjct: 75 DVVVNFAAESHVDRSILEPEVFVKTNVLGTQVLLDAAKKYNVTKFVQVSTDEVYGSLGET 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK + V +Y + Sbjct: 135 GLFTEETPLQPNSPYSASKAGSDLLVRAYHETF 167 >gi|238854922|ref|ZP_04645252.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|282931634|ref|ZP_06337127.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|238832712|gb|EEQ25019.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|281304245|gb|EFA96354.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 331 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K +S F D I++ AA++ V ++ P F N G + +A GI Sbjct: 51 DIRDFKFLSSVFSQEKVDGIVHFAAFSVVPESMKNPLKYFDNNTCGMVTLLEAMKQFGIK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + + PI E P P N YG+SKLA E+ Sbjct: 111 RIVFSSTAATYGEPKQIPIKETDPQIPTNAYGESKLAMEK 150 >gi|182438163|ref|YP_001825882.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466679|dbj|BAG21199.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 332 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 A+ L S D +++ AA++ V ++ PE + N G A+ A G+ ++ ST Sbjct: 66 AARHLDPSYDGVLHFAAFSQVGESVVNPEKYWVNNVGGTTALLAAMREHGVRTLVFSSTA 125 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-- 155 + +PI E PT P + YG SKLA + ++ + V LR V +G Sbjct: 126 ATYGEPVSSPITETDPTAPTSPYGASKLAVDHMISGEATAHGLAAVSLRYFNVAGAYGSC 185 Query: 156 -------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L +A +RE I+V D + TP Sbjct: 186 GERHDPESHLIPLVLHVALGKRESINVYGDDYPTP 220 >gi|332245005|ref|XP_003271653.1| PREDICTED: UDP-glucose 4-epimerase-like [Nomascus leucogenys] Length = 356 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + S G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKSHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|262384771|ref|ZP_06077903.1| NAD-dependent epimerase/dehydratase [Bacteroides sp. 2_1_33B] gi|262293487|gb|EEY81423.1| NAD-dependent epimerase/dehydratase [Bacteroides sp. 2_1_33B] Length = 279 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 24/172 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------------GRPDI-----DLLKP 39 MK L+ G G I L ++ + V GR D DLL Sbjct: 1 MKILITGGAGFIGSHLCDALLERGHRLTVVDNLVLGRKENISHLLGRADFEFIEEDLLHV 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI- 98 + + F + D++ + AA + + K +P++ + + + + GI ++ Sbjct: 61 EAMRTIFKNKKFDMVYHLAANSDIQKGGKDPKVDYDLTFNTTFHVLQYLKEFGIRKLFFA 120 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 ST ++ S + + P P++ YG KLA E +++++ Y+I W+ Sbjct: 121 STSAIYGETSDVLNENYGPLCPVSNYGAGKLASEAFISAFSATYLI--QTWI 170 >gi|260664208|ref|ZP_05865061.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|260562094|gb|EEX28063.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] Length = 331 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K +S F D I++ AA++ V ++ P F N G + +A GI Sbjct: 51 DIRDFKFLSSVFSQEKVDGIVHFAAFSVVPESMKNPLKYFDNNTCGMVTLLEAMKQFGIK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + + PI E P P N YG+SKLA E+ Sbjct: 111 RIVFSSTAATYGEPKQIPIKETDPQIPTNAYGESKLAMEK 150 >gi|229553677|ref|ZP_04442402.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus LMS2-1] gi|258538817|ref|YP_003173316.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus Lc 705] gi|229312954|gb|EEN78927.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus LMS2-1] gi|257150493|emb|CAR89465.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus Lc 705] Length = 331 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N G + +A + GI ++ ST + + Sbjct: 68 DGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E P P N YG+SKLA E+ + +Y +V LR Sbjct: 128 PIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALR 167 >gi|119615495|gb|EAW95089.1| UDP-galactose-4-epimerase, isoform CRA_d [Homo sapiens] Length = 343 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|116494213|ref|YP_805947.1| UDP-glucose 4-epimerase [Lactobacillus casei ATCC 334] gi|116104363|gb|ABJ69505.1| UDP-galactose 4-epimerase [Lactobacillus casei ATCC 334] Length = 331 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N G + +A + GI ++ ST + + Sbjct: 68 DGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E P P N YG+SKLA E+ + +Y +V LR Sbjct: 128 PIKETDPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALR 167 >gi|293553960|ref|ZP_06674564.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] gi|291601886|gb|EFF32134.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] Length = 329 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDL----LKPKDFASF 45 M LV+G G I VQ V+ + G PD ++ K F Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKVFLRS 60 Query: 46 FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 P + +I+ AA + V ++ ++P + F+ N G + + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + +PI E +P NP N YG+SKL E+ + +Y YV LR +++ G Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 ++ + +L++A +R+ ++V D + TP Sbjct: 178 ASIGEDHTPETHLVPIILKVALGQRKALAVYGDDYDTP 215 >gi|289582075|ref|YP_003480541.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] gi|289531628|gb|ADD05979.1| NAD-dependent epimerase/dehydratase [Natrialba magadii ATCC 43099] Length = 296 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 29/176 (16%) Query: 1 MKCLVIGNNGQIAQSLS---SMCVQDVEIIRVGRPD----------IDLLKPKDFASFFL 47 MK +V G G + L + DV + + RP DL L Sbjct: 1 MKIVVTGATGGVGSWLVDHFAAAGHDVLGLDLDRPPRERENATFLAADLTDQGQAWDAIL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 SF PD +++ + A+ + EP+ F N + +AA G ++ S++ ++ Sbjct: 61 SFDPDAVVH---FAAIPRVGIEPDAETFLTNVTSTYHVLEAAGQAGADVVWASSESIYGA 117 Query: 107 LSRT--------PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWV 150 + P+DE P P + Y SKL GE+ A + + +R +WV Sbjct: 118 VFAAEPWLPEYFPVDEDHPRRPEDPYATSKLVGEDIAAMTARKHDVSVTSIRPSWV 173 >gi|148252622|ref|YP_001237207.1| putative sugar nucleotide epimerase/dehydratase [Bradyrhizobium sp. BTAi1] gi|146404795|gb|ABQ33301.1| putative sugar nucleotide epimerase/dehydratase [Bradyrhizobium sp. BTAi1] Length = 345 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 46/229 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL-----------------LKPKDFA 43 MK L+ GN G + ++ ++ +R RPD L L +D Sbjct: 1 MKILITGNLGYVGPAV-------IKYLRQQRPDATLHGFDNAYFAHCLTGAPRLPERDLD 53 Query: 44 SFFLSFSPDVIINPAAYTAV--------DKAEDEPE-IAFSINAEGAGAIAKAADSIGIP 94 F +V ++ +Y AV D ++ E + F IN +IAKAA + G+ Sbjct: 54 EQFYGDVRNVGLDLRSYDAVVQLAAISNDPMGNQFEAVTFDINQGSTVSIAKAAAAAGVK 113 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 ++ S+ V+ P E P NP+ Y KSK+ E ++AS N V+ + + Sbjct: 114 NFVFASSCSVYGVAEGAPRKESDPLNPITAYAKSKIGAERELASIDTNMVVTSLRFATAC 173 Query: 154 FGSNFLLSMLRL------AKERREISVVCDQFGTPTSAL----QIARAI 192 S+ L L L A + +ISV+ D GTP L +ARAI Sbjct: 174 GMSDRLRLDLVLNDFVACALSQGKISVLSD--GTPWRPLIDVADMARAI 220 >gi|94986909|ref|YP_594842.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] gi|94731158|emb|CAJ54520.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] Length = 330 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 4/117 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L S F PD +I+ AA + V ++ P F N G + + + + Sbjct: 50 DILDLSRLQSVFHKHKPDGVIHFAAKSIVSESVSNPGYYFRNNVTGTLNLLETIYNSKVK 109 Query: 95 CIYIS-TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 I +S T V+ + PI E P P+ YG SKL E + S+ Y + +WV Sbjct: 110 YIVVSGTCAVYGQPEQMPIHEDMPKLPVTTYGVSKLVMESMLKSFEAAYGL---SWV 163 >gi|317151833|ref|YP_004119881.1| UDP-glucose 4-epimerase [Desulfovibrio aespoeensis Aspo-2] gi|316942084|gb|ADU61135.1| UDP-glucose 4-epimerase [Desulfovibrio aespoeensis Aspo-2] Length = 323 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVF 104 F ++ P+ +I+ AAY V ++ ++P ++ N G + +A D +P ++ S+ V+ Sbjct: 64 FATYRPEGVIHFAAYCYVGESVEDPGKYYANNVAGTLTLLEAMRDHKVVPIVFSSSCAVY 123 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 PI E P P+N YG SK E + + Sbjct: 124 GAARIVPITEDHPQWPVNPYGWSKFMVERMLEDF 157 >gi|254787087|ref|YP_003074516.1| UDP-glucose 4-epimerase [Teredinibacter turnerae T7901] gi|237687307|gb|ACR14571.1| UDP-glucose 4-epimerase [Teredinibacter turnerae T7901] Length = 339 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 13/121 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F +S D +I+ A AV ++ P + N G A+ + ++ G+ ++ S+ V Sbjct: 68 IFSEYSIDAVIHFAGLKAVGESTQIPLRYYHTNLGGTVALCEVMEAFGVSRLLFSSSATV 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 + + PI E PT+ N YG+SKL EE ILR A + G+++ + +L Sbjct: 128 YGDPASAPILETFPTSATNPYGRSKLMVEE----------ILRDAC--RVPGNDWRVGLL 175 Query: 164 R 164 R Sbjct: 176 R 176 >gi|162148305|ref|YP_001602766.1| UDP-glucuronate 5'-epimerase (UDP-glucuronic aci epimerase) [Gluconacetobacter diazotrophicus PAl 5] gi|209542940|ref|YP_002275169.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter diazotrophicus PAl 5] gi|161786882|emb|CAP56465.1| putative UDP-glucuronate 5'-epimerase (UDP-glucuronic aci epimerase) [Gluconacetobacter diazotrophicus PAl 5] gi|209530617|gb|ACI50554.1| NAD-dependent epimerase/dehydratase [Gluconacetobacter diazotrophicus PAl 5] Length = 332 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR 109 PD++I+ AA V + + P S N G + +A ++G+ + ST V+ + Sbjct: 77 PDIVIHLAAQAGVRYSLENPGAYISANIVGTHNLLEAIKTLGVRHFVLASTSSVYGASAE 136 Query: 110 TPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 +P E N PL++YG +K A EE S+ + Y + TA ++++G Sbjct: 137 SPFTEDQACNHPLSLYGATKKACEEIGHSHAHLYGLPITACRFFTVYG 184 >gi|56202562|emb|CAI23157.1| UDP-galactose-4-epimerase [Homo sapiens] Length = 194 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP-LNIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|315636095|ref|ZP_07891351.1| NAD dependent epimerase/dehydratase [Arcobacter butzleri JV22] gi|315479615|gb|EFU70292.1| NAD dependent epimerase/dehydratase [Arcobacter butzleri JV22] Length = 335 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N G + +A + IY S+ V+ + P+ E P N N YG Sbjct: 103 KDFPRTAFDVNIAGTFNVLEACVKHKVKKLIYSSSASVYGDAVQVPMTEDHPFNNKNFYG 162 Query: 126 KSKLAGEEKVASYTNNY----VILRTAWVYS 152 +K+AGE +Y + Y V LR VY Sbjct: 163 ATKIAGEAMCTAYNDRYGLEIVGLRYMNVYG 193 >gi|227513959|ref|ZP_03944008.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] gi|227087670|gb|EEI22982.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] Length = 310 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + DV++N AA + VD++ ++P S N G + A + Sbjct: 59 DIRDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRARVR 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE--EKVASYT--NNYVILRTAWV 150 + +STD V+ ++ DE +P P + Y +K + + A +T + VI R+A Sbjct: 119 LVQVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANN 178 Query: 151 Y 151 Y Sbjct: 179 Y 179 >gi|307709775|ref|ZP_07646226.1| UDP-glucose 4-epimerase [Streptococcus mitis SK564] gi|307619477|gb|EFN98602.1| UDP-glucose 4-epimerase [Streptococcus mitis SK564] Length = 332 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++++ F ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELNVYDASAFKTYLEENKIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|307265739|ref|ZP_07547291.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919253|gb|EFN49475.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] Length = 329 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + +I+ AA++ V ++ EP + N G ++ KA + ++ ST V+ Sbjct: 61 FTENEIEAVIDFAAFSLVGESVSEPFKYYENNVCGTLSLLKAMKKHNVGKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 R PI E TNP + YG++KLA E+ + +Y YV LR Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALR 166 >gi|206601948|gb|EDZ38430.1| DTDP-glucose 4,6-dehydratase [Leptospirillum sp. Group II '5-way CG'] Length = 357 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 12/106 (11%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------AADSIGIPCIYI 98 FSP + + AA + VD++ + P I N EG ++ + +++ +++ Sbjct: 73 FSPTAVFHFAAESHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFNSLASSEKGRFRFVHV 132 Query: 99 STDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 STD VF LS + P +E +P P + Y SK A + V ++ + Y Sbjct: 133 STDEVFGSLSPSDPPFNEKTPYAPNSPYAASKAASDHFVRAWFHTY 178 >gi|15922289|ref|NP_377958.1| dTDP-glucose 4,6-dehydratase [Sulfolobus tokodaii str. 7] gi|15623078|dbj|BAB67067.1| 320aa long hypothetical dTDP-glucose 4,6-dehydratase [Sulfolobus tokodaii str. 7] Length = 320 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 10/110 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 ++LK K+ AS +V++N AA T VD++ +P+ + N G + +AA Sbjct: 59 NILKEKESAS-------NVVVNFAAETHVDRSIYKPQDFVTTNVIGVVNLLEAARKYDFN 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ++ISTD V+ DE SP P + Y SK + + V +Y Y I Sbjct: 112 YVHISTDEVY---GEECGDEDSPLKPSSPYSASKASADLFVKAYVRTYGI 158 >gi|299783469|gb|ADJ41467.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum CECT 5716] Length = 310 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + DV++N AA + VD++ ++P S N G + A + Sbjct: 59 DIRDAATVSEVLXTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAXVR 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE--EKVASYT--NNYVILRTAWV 150 + +STD V+ + DE +P P + Y +K + + A +T + VI R+A Sbjct: 119 LVQVSTDEVYGSIXAGRXDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANN 178 Query: 151 Y 151 Y Sbjct: 179 Y 179 >gi|118616617|ref|YP_904949.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium ulcerans Agy99] gi|183981102|ref|YP_001849393.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium marinum M] gi|118568727|gb|ABL03478.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium ulcerans Agy99] gi|183174428|gb|ACC39538.1| dTDP-glucose-4,6-dehydratase, RmlB [Mycobacterium marinum M] Length = 331 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 D +++ AA + VD A D PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALDNPEPFVHTNVLGTFTILEAVRRHGVRLHHISTDEVYGDLELHD 131 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 P E +P NP + Y +K + V ++ +Y + T Sbjct: 132 PARFTEATPYNPSSPYSATKAGADMLVRAWVRSYGVAAT 170 >gi|303231127|ref|ZP_07317867.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-049-V-Sch6] gi|302514258|gb|EFL56260.1| UDP-glucose 4-epimerase [Veillonella atypica ACS-049-V-Sch6] Length = 329 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 I++ AA++ V ++ P I + N G+ + ++A G+ ++ ST V+ PI Sbjct: 69 IMHFAAHSQVGESMINPSIYYENNVVGSYRLIESARQAGVQHFVFSSTAAVYGEPEVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL EE + Y+ + YV LR Sbjct: 129 VETAKLQPTNVYGRTKLMIEEMLHDYSSIYGSTYVALR 166 >gi|303275656|ref|XP_003057122.1| predicted protein [Micromonas pusilla CCMP1545] gi|226461474|gb|EEH58767.1| predicted protein [Micromonas pusilla CCMP1545] Length = 339 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 12/138 (8%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAI 84 +RV DI + P++ F P DV+++ AA V +A ++P + + ++ + G + Sbjct: 52 LRVVEADIGI--PEELERAFDPRYPIDVVMHFAAIAFVGEAMEKPLLYYHNVTSNTVGVL 109 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---- 140 +Y ST + PI E +PT P+N YG+SKL E V + Sbjct: 110 EAMKRHKVKRLVYSSTCATYGNPDVMPITEKTPTAPINAYGRSKLYSENAVRDHAKSDPG 169 Query: 141 -NYVILRTAWVYSIFGSN 157 + ILR +++FG++ Sbjct: 170 FDAAILR---YFNVFGAD 184 >gi|298528456|ref|ZP_07015860.1| dTDP-glucose 4,6-dehydratase [Desulfonatronospira thiodismutans ASO3-1] gi|298512108|gb|EFI36010.1| dTDP-glucose 4,6-dehydratase [Desulfonatronospira thiodismutans ASO3-1] Length = 339 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 +S DVI+N AA + VD++ +EP + N +G + +A+ GI I +STD V+ L Sbjct: 75 YSIDVIVNFAAESHVDRSINEPGMFIQSNTQGTYNLLEASRQAGIKKFIQVSTDEVYGSL 134 Query: 108 S-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E SP P + Y SK + + ++ Y Sbjct: 135 GPQGSFKEDSPLAPNSPYAASKASADLLCRAFFKTY 170 >gi|218884406|ref|YP_002428788.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis 1221n] gi|218766022|gb|ACL11421.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis 1221n] Length = 307 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--------------VEIIRVGRPDIDLLKPKDFASFF 46 M+ LV G G I + L S V+ VE R+ D+ + Sbjct: 1 MRILVTGGGGFIGRFLVSDLVKKGYDAIVVDRGPSPFVEHQRIKYYVGDVTNVIQINNIM 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 PDV+I+ AA A D E EP A +N E + + + + GI +++S+ V+ Sbjct: 61 AKHKPDVVIHLAALLA-DTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSASVYH 119 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + P+ E P++ YG +K AGE Sbjct: 120 PDTPEPVREEDAGKPVSYYGVTKYAGE 146 >gi|15896213|ref|NP_349562.1| UDP-galactose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|15026014|gb|AAK80902.1|AE007793_2 UDP-galactose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|325510368|gb|ADZ22004.1| UDP-galactose 4-epimerase [Clostridium acetobutylicum EA 2018] Length = 329 Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 II+ AA + V ++ ++P + F+ N G + ++ I I + ST V+ + PI Sbjct: 70 IIHFAANSLVGESMEKPLLYFNNNVYGMQILLESMVKHNIKNIVFSSTAAVYGEPKKIPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 E TNP N YG++KL E+ + +Y NYV LR Sbjct: 130 LESDDTNPTNTYGETKLTMEKMMKWSSKAYGINYVALR 167 >gi|330820892|ref|YP_004349754.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] gi|327372887|gb|AEA64242.1| NAD-dependent epimerase/dehydratase [Burkholderia gladioli BSR3] Length = 319 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 8/135 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL P PD +I+ AA V A+ +P + +N G + A D++ Sbjct: 61 DLLDPAALREAVAEARPDAVIHLAALAHV--ADSDPSDLYLVNVVGTRNLLAALDTLDAR 118 Query: 95 --CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWV 150 C+ +++ G +R IDE P +P N Y SKLA E ++ +++ + Sbjct: 119 PRCVLLASSANIYGNARVESIDESVPPDPANDYAVSKLAMEYAARLWSERLPIVIARPFN 178 Query: 151 YSIFGS--NFLLSML 163 Y+ G NFLL L Sbjct: 179 YTGVGQRENFLLPKL 193 >gi|254561221|ref|YP_003068316.1| UDP-glucose 4-epimerase [Methylobacterium extorquens DM4] gi|254268499|emb|CAX24456.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens DM4] Length = 307 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + A+ D +++ A E + S N E +A AA + Sbjct: 51 DLARPMNMAAALTGV--DAVVHSAGLAHAMSGAPEDDFRNS-NTEATRKLADAAQRARVG 107 Query: 95 -CIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +++S+ G S P+ E P + YG+SKLA EE +A ++V LR VY Sbjct: 108 RFVFLSSIRAQAGSSAPAPLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYG 167 Query: 153 IFGSNFLLSMLRLAK 167 + ++L+LA+ Sbjct: 168 AGVKGNMAALLKLAR 182 >gi|296125191|ref|YP_003632443.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM 12563] gi|296017007|gb|ADG70244.1| NAD-dependent epimerase/dehydratase [Brachyspira murdochii DSM 12563] Length = 276 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 11/124 (8%) Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I I+I+TD VFDGL + +E N L+ YGKSK GE + +ILRT+ + Sbjct: 105 NIKFIHITTDCVFDGL-KGKYNELDEHNALDEYGKSKSLGEPRGKC-----MILRTSIIG 158 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 N L +++ + ++ + F + Q A QI N + D +F Sbjct: 159 EEIHKNASLICWAKSQKGKSVNGFLNHFWNGITTKQYATICEQIIENNLYEED-----LF 213 Query: 212 HMTA 215 H+ + Sbjct: 214 HIHS 217 >gi|157164630|ref|YP_001467375.1| hypothetical protein CCC13826_0539 [Campylobacter concisus 13826] gi|112802005|gb|EAT99349.1| putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Campylobacter concisus 13826] Length = 328 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N G + +A + IY S+ V+ P+ E P N N YG Sbjct: 96 KDFPRTAFDVNIAGTFNVLEACVKHKVKKLIYSSSASVYGDAVEVPMKETHPFNNKNFYG 155 Query: 126 KSKLAGEEKVASYTNNY 142 +K+AGE +Y + Y Sbjct: 156 ATKIAGEAMCTAYNDRY 172 >gi|281421529|ref|ZP_06252528.1| NAD dependent epimerase/reductase-related protein [Prevotella copri DSM 18205] gi|281404601|gb|EFB35281.1| NAD dependent epimerase/reductase-related protein [Prevotella copri DSM 18205] Length = 331 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGLS 108 D I++ A T AED + +N EG + + +P +++S+ +F + Sbjct: 68 DYIVHAAGATKCLHAED----FYKVNTEGTKHLVNVLLRLQMPIRRFVFVSSLSIFGAIR 123 Query: 109 R----TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLL 160 I E P YGKSKL E + S NN Y+ILR VY ++ L Sbjct: 124 EEQPYQEISEHDTPKPNTAYGKSKLEAERYLDSIGNNFPYIILRPTGVYGPREKDYFL 181 >gi|149277562|ref|ZP_01883703.1| putative capsular polysaccharide biosynthesis protein [Pedobacter sp. BAL39] gi|149231795|gb|EDM37173.1| putative capsular polysaccharide biosynthesis protein [Pedobacter sp. BAL39] Length = 653 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 15/108 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ K S F ++ P + + AAY V ED P A N G IA + G+ Sbjct: 344 DVKDEKRMESLFETYRPHYVYHAAAYKHVPLMEDNPAEAIKTNVIGTKVIADKSVKYGVQ 403 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + ISTD NP N+ G SK E V S N+ Sbjct: 404 KFVMISTD--------------KAVNPTNVMGASKRIAEIYVQSLNNS 437 >gi|332671702|ref|YP_004454710.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484] gi|332340740|gb|AEE47323.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484] Length = 320 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%) Query: 112 IDEFSPTNP----LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + E SP P +N+Y ++K E VA Y + +LR V+ + + L +LRLA Sbjct: 121 LTEDSPVPPDHEQINVYSRTKRISERVVAQYPGAWSVLRPRAVFGVGDTVLLPRILRLA- 179 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 ER + V+ + G P + + + AH + E + + G +H+T Sbjct: 180 ERGALPVLEPRDG-PRVRVDLT-DVHTAAHYVTEAVERGVTGTYHLT 224 >gi|149375104|ref|ZP_01892876.1| UDP-glucose 4-epimerase [Marinobacter algicola DG893] gi|149360468|gb|EDM48920.1| UDP-glucose 4-epimerase [Marinobacter algicola DG893] Length = 327 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + A F + +++ AA V ++ + P + N + KA + +P Sbjct: 50 DLADEQAIADLFSQHRFEAVLHFAANIVVPESVENPLKYYRNNTRNTLNLLKAVEEHQVP 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 ++ ST V+ T + E P P+N YG SK+ E + A+ + NYVILR Sbjct: 110 YMVFSSTAAVYGMPEETVLTEDLPLAPINPYGASKMMSERMIMDLAAASSLNYVILR--- 166 Query: 150 VYSIFGSN 157 +++ G+N Sbjct: 167 YFNVAGAN 174 >gi|296108815|ref|YP_003615764.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] gi|295433629|gb|ADG12800.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus infernus ME] Length = 299 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 + II+ AA V + ++P +N G + + A IY S+ V+ P Sbjct: 61 EAIIHHAAQINVRHSVEKPRYDADVNVLGTINLLELARKADAKFIYASSMAVYGNPKYLP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 +DE +P++ YG SK GE + Y N Y ILR + VY Sbjct: 121 VDENHEIDPISPYGLSKYCGELYIKLYNNLYGLEYSILRYSNVYG 165 >gi|56202561|emb|CAI23156.1| UDP-galactose-4-epimerase [Homo sapiens] Length = 195 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP-LNIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|114777824|ref|ZP_01452755.1| hypothetical protein SPV1_00210 [Mariprofundus ferrooxydans PV-1] gi|114551815|gb|EAU54355.1| hypothetical protein SPV1_00210 [Mariprofundus ferrooxydans PV-1] Length = 620 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 15/88 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F SF PD++ N AAY V E+ P N G +A A + G+ + ISTD Sbjct: 355 FESFRPDIVFNAAAYKHVPLVEENPVEGIKTNVLGTCQLADLAVAYGVKKFVQISTD--- 411 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP N+ G SK E Sbjct: 412 -----------KAVNPTNVMGASKRTAE 428 >gi|238787745|ref|ZP_04631542.1| NAD dependent sugar epimerase [Yersinia frederiksenii ATCC 33641] gi|238724088|gb|EEQ15731.1| NAD dependent sugar epimerase [Yersinia frederiksenii ATCC 33641] Length = 360 Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYV 103 +F P++I++ AA V ++ EP F NA+G I +AA ++ G+ C I+TD V Sbjct: 82 TFKPELILHLAAQPLVRRSYREPVSTFLTNAQGTAHILEAARTVKSVKGVLC--ITTDKV 139 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E P + Y SK A E + S+ +Y Sbjct: 140 YKNNEWPWPYRENDPLGGKDPYSASKAAAEMIIQSFAASY 179 >gi|218530267|ref|YP_002421083.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] gi|218522570|gb|ACK83155.1| NAD-dependent epimerase/dehydratase [Methylobacterium chloromethanicum CM4] Length = 307 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + A+ D +++ A E + S N E +A AA + Sbjct: 51 DLARPMNMAAALTGV--DAVVHSAGLAHAMSGAPEDDFRNS-NTEATRKLADAAQRARVG 107 Query: 95 -CIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +++S+ G S P+ E P + YG+SKLA EE +A ++V LR VY Sbjct: 108 RFVFLSSIRAQAGSSAPVPLSEADAPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYG 167 Query: 153 IFGSNFLLSMLRLAK 167 + ++L+LA+ Sbjct: 168 AGVKGNMAALLKLAR 182 >gi|117620829|ref|YP_858588.1| CDP-glucose 4,6-dehydratase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562236|gb|ABK39184.1| CDP-glucose 4,6-dehydratase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 355 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 6/140 (4%) Query: 25 EIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 E+ ++ R I D+ P F L P+V+ + AA + V EP F N G+ Sbjct: 57 EVAKICRHHICDICVPGQFGPLILESQPEVVFHLAAQSLVRGGYAEPARTFETNLMGSVY 116 Query: 84 I---AKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +++DS+ + ++TD V+ L S P E + Y SK A E + SY Sbjct: 117 LLDALRSSDSVK-SVVMVTTDKVYSNLESIWPYRETDRLGGHDPYSASKAASELVITSYR 175 Query: 140 NNYVILRTAWVYSIFGSNFL 159 + ++ R V + N + Sbjct: 176 DAFLAARGVAVATARAGNVI 195 >gi|86748722|ref|YP_485218.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris HaA2] gi|86571750|gb|ABD06307.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris HaA2] Length = 337 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V ++ +P + N + + AA + G+ I+ ST V+ RT Sbjct: 68 DAIIHFAGSVIVSESMRDPLGYYRNNTMTSRNLLSAAVTCGVNNFIFSSTAAVYGNPDRT 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E +PT PL+ YG SKL E + ++ NYV LR Sbjct: 128 PVPEEAPTRPLSPYGCSKLMTEIMLHDTASANGMNYVALR 167 >gi|92113845|ref|YP_573773.1| UDP-galactose 4-epimerase [Chromohalobacter salexigens DSM 3043] gi|91796935|gb|ABE59074.1| UDP-galactose 4-epimerase [Chromohalobacter salexigens DSM 3043] Length = 373 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F F +++ A +V ++ EP F N G + +A + G+ ++ S+ V+ Sbjct: 69 FADFEISDVLHFAGLKSVGESVSEPLAYFENNVAGTITLCQAMTAAGVYRLVFSSSATVY 128 Query: 105 DGLSRTPIDEFSPT-NPLNIYGKSKLAGEE 133 +R P+ E +PT P N YG SKL EE Sbjct: 129 GDATRMPLSENAPTGQPTNAYGHSKLMVEE 158 >gi|323525013|ref|YP_004227166.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001] gi|323382015|gb|ADX54106.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001] Length = 303 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 8/150 (5%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ P++ + PD I++ AA + V D+P + +N G + +A + Sbjct: 51 RLRLDITSPENCRRVIEAVRPDYIVHLAAISFV--GHDDPLDFYRVNVIGTLNLLEACAA 108 Query: 91 IG-IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 G P + S+ V+ ++ IDE P P+N Y SK A E V ++ + IL Sbjct: 109 TGHTPRKVLIASSANVYGNVTSDAIDETFPLTPVNHYAASKAAMETMVHTWFDRLPILIV 168 Query: 148 -AWVYSIFG--SNFLLSMLRLAKERREISV 174 + Y+ G SNFL+ + RRE S+ Sbjct: 169 RPFNYTGRGQASNFLVPKIVEHFARREPSI 198 >gi|297567132|ref|YP_003686104.1| dTDP-glucose 4,6-dehydratase [Meiothermus silvanus DSM 9946] gi|296851581|gb|ADH64596.1| dTDP-glucose 4,6-dehydratase [Meiothermus silvanus DSM 9946] Length = 331 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ +P N EG + + A G+ +++STD V+ L+ T Sbjct: 70 DAVVNFAAESHVDRSLLDPRPFVKTNVEGTLVLLEEARRAGVRRFLHVSTDEVYGDLAGT 129 Query: 111 PID--EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E P P + Y SK A E V SY +Y Sbjct: 130 LHHSLEADPMRPRSPYAASKAAAEHLVYSYGISY 163 >gi|261349836|ref|ZP_05975253.1| dTDP-glucose 4,6-dehydratase [Methanobrevibacter smithii DSM 2374] gi|288860620|gb|EFC92918.1| dTDP-glucose 4,6-dehydratase [Methanobrevibacter smithii DSM 2374] Length = 334 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +IN AA + VD++ +PEI N G + AA G+ + ISTD V+ L T Sbjct: 75 DYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVEKYVQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 E +P P + Y SK + + V +Y Sbjct: 135 GYFTETTPLQPNSPYSASKASADLVVRAY 163 >gi|126459499|ref|YP_001055777.1| NAD-dependent epimerase/dehydratase [Pyrobaculum calidifontis JCM 11548] gi|301015788|pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase gi|312207847|pdb|3KO8|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase gi|126249220|gb|ABO08311.1| NAD-dependent epimerase/dehydratase [Pyrobaculum calidifontis JCM 11548] Length = 312 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 15/152 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRV-----GR-------PDIDLLKPKDFASFFL 47 M+ +V G G I L V+ E++ V GR ++ + KD+ S+ Sbjct: 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDY-SWGA 59 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 DV+ + AA V + EP + F+ N + + A G+ ++ S+ V+ Sbjct: 60 GIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGD 119 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P E P P+++YG +K AGE A+Y Sbjct: 120 ADVIPTPEEEPYKPISVYGAAKAAGEVMCATY 151 >gi|126178137|ref|YP_001046102.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] gi|125860931|gb|ABN56120.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] Length = 320 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P S F D +++ AA + VD++ ++ + N G + +AA S G+ Sbjct: 59 DICDPGVVGSVFREHPIDAVVHFAAESHVDRSIEDASVFVRTNVLGTHVLLEAALSHGVG 118 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRT 147 I++STD V+ + E NP + Y SK A + SY T+N ++ T Sbjct: 119 RFIHVSTDEVYGSIKSGSFRETDNLNPSSPYSASKAASDLLARSYYITHNLPVIVT 174 >gi|23464836|ref|NP_695439.1| dTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] gi|23325420|gb|AAN24075.1| dTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] Length = 347 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 88 DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 147 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y I T Sbjct: 148 PAKFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIRAT 186 >gi|332716884|ref|YP_004444350.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] gi|325063569|gb|ADY67259.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] Length = 327 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 5/160 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL++ G ++ E +R G D+ F P+ +++ AA Sbjct: 19 CLLLSERGYEPVVFDNLSNGHEEFVRWGPFEQGDIRDRARLDEVFARHQPEAVLHFAALI 78 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 V ++ +P + N G+ + AA G+ S+ GL + PIDE P Sbjct: 79 EVGESVKQPVAFYDNNVIGSLNLLSAAIDAGVTAFVFSSTCATYGLPEQVPIDETHRQAP 138 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWV--YSIFGSNF 158 +N YG++K E+ + Y+ Y LR+ + ++ G++F Sbjct: 139 INPYGRTKWVVEQALKDYS-TYKGLRSVMLRYFNAAGADF 177 >gi|319901774|ref|YP_004161502.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides helcogenes P 36-108] gi|319416805|gb|ADV43916.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides helcogenes P 36-108] Length = 340 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA + G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALATGVHHVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|147839168|emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera] Length = 368 Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 29/125 (23%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK---AADSIGIPCIYISTDYVFDGL 107 P V++N AA + E +P A SIN ++ K + + I++STD Sbjct: 100 PHVVVNCAAISVPRSCEMDPAAAMSINV--PSSLVKWLLSFEESNTLLIHLSTDQGLINP 157 Query: 108 SRTPIDEF------------------------SPTNPLNIYGKSKLAGEEKVASYTNNYV 143 + T + EF T P+N+YGKSK+A E+ +++ +NY Sbjct: 158 TETFMREFWIQIDTDMADHPVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYA 217 Query: 144 ILRTA 148 ILR++ Sbjct: 218 ILRSS 222 >gi|320332783|ref|YP_004169494.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM 21211] gi|319754072|gb|ADV65829.1| NAD-dependent epimerase/dehydratase [Deinococcus maricopensis DSM 21211] Length = 357 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 49/257 (19%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DI + P D D +++ A + + P I + IN G+ +A+ A + G Sbjct: 54 DIRHITPDDLRGV------DAVVHMAELSNDPLGQLLPNITYDINHLGSLRLARMAKAAG 107 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTA 148 + +Y+S+ V+ + +DE S NP Y K+ E + + ++ LR A Sbjct: 108 VRRFVYMSSCSVYGVAEGSDVDETSAVNPQTAYADCKVLVERDLRALADDTFSPTYLRNA 167 Query: 149 WVYSIFGSN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAII---- 193 + FG++ L ++ LA EI + D GTP A IARAI+ Sbjct: 168 ---TAFGASPRMRFDIVLNNLAGLAYTTGEIRMTSD--GTPWRPLVHASDIARAIVCVLQ 222 Query: 194 ---QIAHNLIEN-SDTS----LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR 245 ++ HN + N DT+ +R I + A P F E G ++ YR Sbjct: 223 APLEVVHNEVFNVGDTAQNYRVRDIAQIIAGAFPGCQLSFGE---------NGSDNRSYR 273 Query: 246 IFTKQYPTKAHRPAYSC 262 + ++ T+ P + C Sbjct: 274 VSFEKINTRL--PGFRC 288 >gi|296274091|ref|YP_003656722.1| NAD-dependent epimerase/dehydratase [Arcobacter nitrofigilis DSM 7299] gi|296098265|gb|ADG94215.1| NAD-dependent epimerase/dehydratase [Arcobacter nitrofigilis DSM 7299] Length = 327 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N G + +A + IY S+ V+ + P+ E P N N YG Sbjct: 95 KDFPRTAFDVNIAGTFNVLEACVKHKVKKLIYSSSASVYGDAVQVPMTEDHPFNNKNFYG 154 Query: 126 KSKLAGEEKVASYTNNY----VILRTAWVYS 152 +K+AGE +Y + Y V LR VY Sbjct: 155 ATKIAGEAMCTAYNDRYGLEIVGLRYMNVYG 185 >gi|220905212|ref|YP_002480524.1| UDP-glucose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869511|gb|ACL49846.1| UDP-glucose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 328 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 47/255 (18%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII---------RVGRPDI------DLLKPKDFAS 44 M LV G G I + ++ S+ + E++ R PD D+ + + Sbjct: 1 MPILVCGGAGYIGSHNVRSLLARGEEVVVIDNFFTGHRASLPDGVTLYEGDIRQGELLDR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-----ADSIGIPCIYIS 99 F D +++ AA + V ++ ++P F N G ++ +A D I ++ S Sbjct: 61 IFSEHRVDAVLHFAASSLVGESMEQPLKYFHNNVHGMQSLLEAMVRNHVDKI----VFSS 116 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR-----TAWV 150 + V+ PI E + +P N YG+SKL E + ++ +V LR AW Sbjct: 117 SAAVYGEQDNVPISEDAALSPTNPYGESKLIMERMMHWVGKAHGIRFVSLRYFNVGGAWP 176 Query: 151 YSIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 I G S+ + +L++ RRE +++ + + TP I+ +++ + Sbjct: 177 GGIIGEDHRPESHLIPLILQVPLGRRETVTIFGNDYPTPDG------TCIRDYIGVMDLA 230 Query: 204 DTSLRGIFHMTADGG 218 D +R + ++ A GG Sbjct: 231 DAHMRALDYLRAGGG 245 >gi|119947059|ref|YP_944739.1| nucleoside-diphosphate-sugar epimerase [Psychromonas ingrahamii 37] gi|119865663|gb|ABM05140.1| Nucleoside-diphosphate-sugar epimerase [Psychromonas ingrahamii 37] Length = 508 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 25/173 (14%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGR-------PDIDLLKPKDFASFF--LSFS 50 MK ++ G+ G + + L + + + VE+I++GR P +K D AS F + Sbjct: 1 MKIVLTGSTGFLGKELLTKLANEPVELIQIGRNEYNKNNPHYIYIKGLDSASQFNLAIYK 60 Query: 51 PDVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 DV+I+ AA + D + + E +N+ G +A+ A G+ I+IS+ V Sbjct: 61 CDVVIHCAARVHIMDDDSANPLEDFREVNSHGTLNLAQQAADAGVKRFIFISSIKVNGES 120 Query: 108 SRT-----PIDEFSPTNPLNIYGKSKLAGE---EKVASYTN-NYVILRTAWVY 151 + T P +F PT+P YG SK E K+A T VI+R VY Sbjct: 121 TETVAPFKPDTDFVPTDP---YGLSKYEAEVGLRKIAEQTGMEVVIIRPTLVY 170 >gi|152984520|ref|YP_001347351.1| NAD-dependent epimerase/dehydratase [Pseudomonas aeruginosa PA7] gi|150959678|gb|ABR81703.1| NAD-dependent epimerase/dehydratase [Pseudomonas aeruginosa PA7] Length = 326 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ + AA A+ + P+ N +G I +AA G+ ++ ST V+ Sbjct: 73 DVVFHLAALIAIPYSYVAPDSYLETNVKGVINICQAALENGVQRVVHTSTSEVYGTAQYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + S+ N + Sbjct: 133 PIDEKHPLQPQSPYSASKIAADAMAMSFFNAF 164 >gi|156743036|ref|YP_001433165.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234364|gb|ABU59147.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 350 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 30/177 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-----------VEIIRVGRPDIDL---------LKPK 40 M+ LV G+ G I L+ M ++ E G P +D+ ++ Sbjct: 1 MRVLVTGHKGYIGTVLTPMLLERGYEVLGLDSDLFEECTFGAPPVDVPEIRKDIRDVEAD 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 D A D I++ A + + +P++ + IN + +A A GI I+ S Sbjct: 61 DLAGV------DAIMHLAGLSNDPLGDLDPQLTYEINYLASVRLAMLAKQAGITRFIFSS 114 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSI 153 + + +DE SP NP+ YG+SK+ E+ +A + + LR A Y + Sbjct: 115 SCSTYGAAGDEMLDETSPFNPVTPYGRSKVLVEQDLAKLADADFSPTYLRNATAYGV 171 >gi|148984319|ref|ZP_01817614.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP3-BS71] gi|147923608|gb|EDK74721.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP3-BS71] gi|301800647|emb|CBW33291.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae OXC141] Length = 233 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ + D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKVYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|124515992|gb|EAY57501.1| DTDP-glucose 4,6-dehydratase [Leptospirillum rubarum] Length = 357 Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 12/106 (11%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPC--------IYI 98 FSP + + AA + VD++ + P I N EG ++ + + +P +++ Sbjct: 73 FSPAAVFHFAAESHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFDALPSNEKGRFRFLHV 132 Query: 99 STDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 STD VF LS + P +E +P P + Y SK A + V ++ + Y Sbjct: 133 STDEVFGSLSPSDPPFNERTPYAPNSPYAASKAASDHFVRAWFHTY 178 >gi|330837204|ref|YP_004411845.1| dTDP-glucose 4,6-dehydratase [Spirochaeta coccoides DSM 17374] gi|329749107|gb|AEC02463.1| dTDP-glucose 4,6-dehydratase [Spirochaeta coccoides DSM 17374] Length = 339 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 S F + D+++N AA + VD++ +P I N G G + A+ + G+ + +STD Sbjct: 68 SLFQHENFDMVVNFAAESHVDRSILDPGIFLQTNVMGTGVLLDASRAWGVKRFHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ PL+ Y SK A + V +Y Y Sbjct: 128 VYGDL---PLDRPELLFTEETPLHASSPYSASKAAADLLVLAYHRTY 171 >gi|296392318|ref|ZP_06881793.1| oxidoreductase Rmd [Pseudomonas aeruginosa PAb1] Length = 304 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97 Query: 95 C--IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ ++ PI E +P N Y SKLA E Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAE 139 >gi|240138623|ref|YP_002963095.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens AM1] gi|240008592|gb|ACS39818.1| putative UDP-glucose 4-epimerase [Methylobacterium extorquens AM1] Length = 307 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + A+ D +++ A E + S N E +A AA + Sbjct: 51 DLARPMNMAAALTGV--DAVVHSAGLAHAMSGAPEDDFRNS-NTEATRKLADAAQRARVG 107 Query: 95 -CIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +++S+ G S P+ E P + YG+SKLA EE +A ++V LR VY Sbjct: 108 RFVFLSSIRAQAGSSAPAPLSEADTPEPTDPYGRSKLAAEEALAETGLDWVALRPVLVYG 167 Query: 153 IFGSNFLLSMLRLAK 167 + ++L+LA+ Sbjct: 168 AGVKGNMAALLKLAR 182 >gi|261346800|ref|ZP_05974444.1| UDP-N-acetylglucosamine 4-epimerase [Providencia rustigianii DSM 4541] gi|282565198|gb|EFB70733.1| UDP-N-acetylglucosamine 4-epimerase [Providencia rustigianii DSM 4541] Length = 315 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 17/140 (12%) Query: 5 VIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDI--------DLLKPKDFASFFLSFSPDV 53 +IG +G I LS+ D +I+ + + + D+ KP+ DV Sbjct: 4 IIGGSGFIGTRLSNQLKSQNIDFKIVDIEKSEAHPEKWEFGDVTKPETLIEPLKG--SDV 61 Query: 54 IINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 IIN +A K P + + +N +GA + AD +GI I ++ G Sbjct: 62 IIN---LSAKHKDNVHPISLYYDVNVDGAKNVCNVADQLGIKHIVFTSSVAVYGFVEKET 118 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E +P N YGKSKL E Sbjct: 119 GEDGEYHPFNHYGKSKLEAE 138 >gi|215697943|dbj|BAG92142.1| unnamed protein product [Oryza sativa Japonica Group] Length = 172 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 15/173 (8%) Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLLSMLRLAKERREISVVC 176 +YGKSK+A E+ + +NY ILR++ +Y + S + M + + +++ Sbjct: 1 MYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFN 60 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSWADFAEYIFWESA 234 D+F P + ++ + + + + + + + GGP VS AE + + Sbjct: 61 DEFRCPVYVKDMVDVVLSLTKSWLADG----KAVQVLLNVGGPDRVSRLQMAESV---AD 113 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RG +S + + P +D +KL I+ ++++GVR L Sbjct: 114 VRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISFQDGVRATL 166 >gi|124021831|ref|YP_001016138.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9303] gi|123962117|gb|ABM76873.1| dTDP-D-glucose 4,6-dehydratase [Prochlorococcus marinus str. MIT 9303] Length = 364 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--- 90 +DL P + PD++ + AA + VD++ + P I F N EG + ++ S Sbjct: 72 VDLSDPLSTQAAVCEADPDLVFHLAAESHVDRSINNPRIFFESNVEGTFNLLESLRSHYA 131 Query: 91 -------IGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ISTD VF L + E SP P + Y +K A + V ++ + Y Sbjct: 132 ELSKERRARFRLLHISTDEVFGSLGDQGFFCETSPYQPRSPYSATKAASDHLVQAWIHTY 191 >gi|123966533|ref|YP_001011614.1| putative GDP-D-mannose dehydratase [Prochlorococcus marinus str. MIT 9515] gi|123200899|gb|ABM72507.1| putative GDP-D-mannose dehydratase [Prochlorococcus marinus str. MIT 9515] Length = 322 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 DL+ A F F PD+I N AA + V + D P +NA GA + AA ++ Sbjct: 58 DLIDQNSLADAFRHFKPDLIFNLAAQSHVRLSFDMPGFTAQVNAVGALNVFTAAKENCEG 117 Query: 94 PCIYISTDYVFDGLSRTPID---EFSPTNPLNIYGKSKL 129 IY ++ G S P + E +P +P++ YG SKL Sbjct: 118 ARIYQASSSEMFGTSVDPDNYQRETTPMHPVSPYGCSKL 156 >gi|324008902|gb|EGB78121.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 57-2] Length = 331 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 18/150 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR------PDI----DLLKPKDFASFFLSFSPD 52 L+IG +G + L + D I + + P+I D+ + + F Sbjct: 5 VLLIGTSGFVGTRLLETAIADFNIKNLDKQQSHFYPEITQIGDVRDQQALDQALVGFDTV 64 Query: 53 VIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 V++ A + +D + + +N +G + A + G+ I ++ GL++ Sbjct: 65 VLL------AAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKH 118 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 DE P +P N YGKSK EE + + N Sbjct: 119 NPDENHPHDPFNHYGKSKWQAEEVLREWYN 148 >gi|325105946|ref|YP_004275600.1| NAD-dependent epimerase/dehydratase [Pedobacter saltans DSM 12145] gi|324974794|gb|ADY53778.1| NAD-dependent epimerase/dehydratase [Pedobacter saltans DSM 12145] Length = 298 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL--KPKDFASFFLSFSPDVIINPAA 59 K L+ G++G + +S+ S+ + E+I +GR D+L K+ S L ++ VI + Sbjct: 3 KILLTGSSGFLGKSIQSVLHSNFELITLGRSKSDILCDISKEIPS--LPYADLVIHSAGK 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAAD---SIGIPCIYISTDYVFDGLSRTPIDEFS 116 V K E E + + +N +G + + + S+ ++IS+ V+ T I E Sbjct: 61 AHIVPKTEAEKQAFYDVNVKGTENLLRGLELSSSLPKSFVFISSVAVYGQDKGTLIKEEH 120 Query: 117 PTNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSN 157 + YG+SK+ E+ V + N VI + + G+N Sbjct: 121 TLKAKDPYGQSKIEAEQIVQEWCEQNNVICAILRLPLLVGAN 162 >gi|294791630|ref|ZP_06756778.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|294456860|gb|EFG25222.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 329 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA++ V ++ P I + N G+ + ++A + GI ++ ST V+ PI Sbjct: 69 VMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIKHFVFSSTAAVYGEPKVVPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL E+ ++ Y+ + YV LR Sbjct: 129 CEDAQLQPTNVYGRTKLMIEKMLSDYSSIYGSTYVALR 166 >gi|199596970|ref|ZP_03210403.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus HN001] gi|258507649|ref|YP_003170400.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus GG] gi|199592103|gb|EDZ00177.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus HN001] gi|257147576|emb|CAR86549.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus GG] gi|259648998|dbj|BAI41160.1| UDP-glucose 4-epimerase [Lactobacillus rhamnosus GG] Length = 331 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA++ V ++ +P F N G + +A + GI ++ ST + + Sbjct: 68 DGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 PI E P P N YG+SKLA E+ + +Y +V LR Sbjct: 128 PIKETDPQVPTNPYGESKLAMEKIMHWADIAYGLKFVALR 167 >gi|192292879|ref|YP_001993484.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris TIE-1] gi|192286628|gb|ACF03009.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris TIE-1] Length = 337 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 28/145 (19%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVY 151 I+ ST V+ R P+ E +PT PL+ YG+SKL E + +Y YV LR + Sbjct: 113 IFSSTAAVYGNPDRIPVGEDAPTRPLSPYGRSKLMTEIMLHDAAEAYGVKYVALR---YF 169 Query: 152 SIFGSNFL----------LSMLRLAKE-----RREISVVCDQFGTPTSALQIARAIIQIA 196 ++ G++ L ++++A E R I V + TP + R I + Sbjct: 170 NVAGADPLGRVGLATEGATHLIKIAAEAATGQRSRIDVYGTDYPTPDGSC--IRDFIHVT 227 Query: 197 HNLIENSDTSLRGIFHMTADGGPVS 221 +L E +L ++ A GGPV+ Sbjct: 228 -DLAEAHGAALG---YLRAGGGPVT 248 >gi|148643369|ref|YP_001273882.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Methanobrevibacter smithii ATCC 35061] gi|148552386|gb|ABQ87514.1| dTDP-D-glucose 4,6-dehydratase, RfbB [Methanobrevibacter smithii ATCC 35061] Length = 336 Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +IN AA + VD++ +PEI N G + AA G+ + ISTD V+ L T Sbjct: 75 DYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVEKYVQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 E +P P + Y SK + + V +Y Sbjct: 135 GYFTETTPLQPNSPYSASKASADLVVRAY 163 >gi|323350670|ref|ZP_08086331.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis VMC66] gi|322123090|gb|EFX94781.1| capsular polysaccharide biosynthesis protein Cap5N [Streptococcus sanguinis VMC66] Length = 286 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 15/158 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G I +S V E ++V D+ + K KDF+ F DVI++ AA Sbjct: 3 RILITGEGSYIGRSFKR-YVSSREDVQVDELDVRGEAWKEKDFSPF------DVILHLAA 55 Query: 60 YTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 + E E + +N + +A+ A+ G+ I++S+ V+ + L I + + Sbjct: 56 IVHISNPSKEMESEYKQVNTQLPYELAQKANREGVKQFIFMSSMSVYGEVLGDRVITKET 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 P + YGKSKLA E+ +A + +LR VY Sbjct: 116 QERPDSFYGKSKLAAEQLLAELESEDFKLAVLRPPMVY 153 >gi|254478573|ref|ZP_05091947.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035502|gb|EEB76202.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 172 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 20/167 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK LV G G I ++ + +++ V+ + G+ + + D Sbjct: 1 MKVLVTGGAGFIGSHIADLLIENGYEVVIVDNLSTGKEEFINKKAIFYKKYITDDDLYEI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAADSIGIPCIYISTDY 102 F PD +I+ +A V K D P +N G + + +D + C S+ Sbjct: 61 FERERPDYVIHQSAQIDVQKLIDNPVFDAKVNILGTVNLLECCRKSDVKKVVCA--SSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 V+ PIDE NP++ YG SK E Y+ Y + T + Sbjct: 119 VYGNPEYLPIDEKHKVNPISYYGVSKHTPEHYFEVYSQLYGLKYTIY 165 >gi|222478917|ref|YP_002565154.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222451819|gb|ACM56084.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 300 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 ++ D++ D PIDE +PT P + YG SK+ GEE A Y V LR +WV Sbjct: 119 VFSEADWLPDAF---PIDEETPTEPEDPYGLSKVVGEEIAARVARRYGVSAVSLRASWV 174 >gi|156743027|ref|YP_001433156.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234355|gb|ABU59138.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 314 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 +VI + A +V ++ D+P ++N G + AA G ++ S+ V+ Sbjct: 70 EVIFHQGALASVQRSVDDPITTNAVNVTGTLHVLTAARDAGAHRVVFASSSSVYGDTPTL 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 P E +PL+ Y SKLAGE+ ++++ Y + A Y ++FG Sbjct: 130 PKVETQAPHPLSPYAVSKLAGEQYCMAFSSVYGLPAIALRYFNVFG 175 >gi|294783491|ref|ZP_06748815.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 1_1_41FAA] gi|294480369|gb|EFG28146.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 1_1_41FAA] Length = 327 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 26/176 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 +++N G I + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNVNVIGTKNIVQVCEEKKLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + + +Y+I+R ++ I ++ + +L L K+ +++I + C + Sbjct: 145 AENIIKASNLDYMIIRPRGLFGIGDTSIIPRLLELNKKMGIPLFVDGKQKIDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 +L++A +EN + S R I+++T +G P+ + + F E G Sbjct: 203 VAYSLRLA----------LENKEHS-REIYNIT-NGEPIEFKEILTLFFNEMGTEG 246 >gi|261855245|ref|YP_003262528.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] gi|261835714|gb|ACX95481.1| NAD-dependent epimerase/dehydratase [Halothiobacillus neapolitanus c2] Length = 334 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ + AA A+ + P+ N G + +AA G+ I+ ST V+ Sbjct: 81 DVVFHLAALIAIPYSYIAPDSYVDTNVRGTLNVCQAALDAGVKRVIHTSTSEVYGTARYV 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 PIDE P P + Y SK+ + S+ N++ + L A ++ +G Sbjct: 141 PIDEKHPLQPQSPYSASKIGADAIAQSFQNSFSLPLTVARPFNTYG 186 >gi|166366027|ref|YP_001658300.1| dTDP-glucose 4,6-dehydratase [Microcystis aeruginosa NIES-843] gi|166088400|dbj|BAG03108.1| dTDP-glucose 4,6-dehydratase [Microcystis aeruginosa NIES-843] Length = 262 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 9/128 (7%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC- 95 L D A P V I+ AA +V + EP+ F+ +G D++ + Sbjct: 8 LPSPDLAILIEQLQPQVCIHCAARASVPLSVSEPKADFT---DGVVVTFNLLDALRLHAP 64 Query: 96 ----IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR-TAWV 150 IY+S+ V+ P++E NP++ YG KL E+ + Y +L T + Sbjct: 65 QCRVIYLSSAAVYGNHKTLPVNESHSLNPISPYGYHKLICEQLCREFFQVYGLLTATVRI 124 Query: 151 YSIFGSNF 158 +S +G Sbjct: 125 FSAYGPGL 132 >gi|86748687|ref|YP_485183.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] gi|86571715|gb|ABD06272.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris HaA2] Length = 353 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 11/105 (10%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIPCIYI 98 FSPDV+++ AA + VD++ D P N G + +AA G +I Sbjct: 74 FSPDVVMHLAAESHVDRSIDGPAEFIQTNVVGTFVLLQAALAHWRALPADRKAGFRFHHI 133 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 STD VF L T DE + P + Y SK + V ++ + Y Sbjct: 134 STDEVFGSLGPTGYFDEQTAYQPNSPYSASKAGSDHLVRAWHHTY 178 >gi|68536982|ref|YP_251687.1| dTDP-glucose-4,6-dehydratase [Corynebacterium jeikeium K411] gi|68264581|emb|CAI38069.1| dTDP-glucose-4,6-dehydratase [Corynebacterium jeikeium K411] Length = 378 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 +P+ FA+ ++ I++ AA + D + P I N EG +A+AA +G+ + Sbjct: 101 EPQQFAADRVA-----IVHFAAESHNDNSLATPAIFARSNVEGTLNVAQAAADLGVRLHH 155 Query: 98 ISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASY 138 ISTD VF L+ + F +P NP + Y SK A + V ++ Sbjct: 156 ISTDEVFGDLALDDPNRFTVDTPYNPSSPYSASKAAADHFVRAF 199 >gi|300709849|ref|YP_003735663.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] gi|299123532|gb|ADJ13871.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] Length = 305 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 19/171 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF-----------LSF 49 + LV G G I +L++ +D ++I + D L P++ S L Sbjct: 4 QRVLVTGGAGFIGSTLANHLAEDNDVIAI--DDCYLGTPENLDSAVEFHESSVLEDDLPT 61 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEG-AGAIAKAADSIGIPCIYISTDYVFDGLS 108 DV+ + AA ++ EDEP +N EG + +A + +Y ST ++ G Sbjct: 62 DVDVVFHLAALSSYAMHEDEPTRGARVNVEGFVNTVEQAREDGCDTVVYASTSSIY-GNQ 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 P E P Y SKLA E + N+Y + LR VY +G Sbjct: 121 TEPSPEDMPVEVNTGYEASKLARERYAEYFANHYDMSMAGLRFFSVYQGYG 171 >gi|255088205|ref|XP_002506025.1| predicted protein [Micromonas sp. RCC299] gi|226521296|gb|ACO67283.1| predicted protein [Micromonas sp. RCC299] Length = 359 Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF---SINAEGAGAIAKAAD 89 D DL +D F D +I+ AA V ++ +P + ++N G + D Sbjct: 77 DGDLGVQRDLERAFGKHKVDAVIHFAAIAYVGESVAQPLAYYRNVTVNTIGLLEAMRRHD 136 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVI 144 + +Y ST + PI E +PT P+N YGKSKL E+ VA+ + I Sbjct: 137 VRKL--VYSSTCATYGNPDELPITEKTPTVPINPYGKSKLYAEDAIRDFAVANKDFDAAI 194 Query: 145 LRTAWVYSIFGSN 157 LR +++FGS+ Sbjct: 195 LR---YFNVFGSD 204 >gi|303238677|ref|ZP_07325210.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] gi|302593796|gb|EFL63511.1| dTDP-glucose 4,6-dehydratase [Acetivibrio cellulolyticus CD2] Length = 339 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ K + F PD+++N AA + VD++ + P++ + G + A GI Sbjct: 58 VDIRDRKAIYNLFEEEHPDMVVNFAAESHVDRSIENPKVFLDTSINGTAVMMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L P+D F+ PL + Y SK + V SY Y Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFTEETPLYTSSPYSSSKAGADLLVLSYHRTY 171 >gi|257126483|ref|YP_003164597.1| NAD-dependent epimerase/dehydratase [Leptotrichia buccalis C-1013-b] gi|257050422|gb|ACV39606.1| NAD-dependent epimerase/dehydratase [Leptotrichia buccalis C-1013-b] Length = 327 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 28/186 (15%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID----EFSPTNPLNIYGKSKL 129 + +N G I + + G+ +++S+ ++ G ++ +D E N LN Y KSK+ Sbjct: 85 YKVNVLGTRNIVEICEKQGLKLVFVSSPSIYAG-AKDQLDVKENEAPKDNNLNFYIKSKI 143 Query: 130 AGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFG 180 E + + NY+I+R ++ I ++ + +L L K+ ++++ V C + Sbjct: 144 MAENIIKNSKLNYMIIRPRGLFGIGDTSIIPRLLDLNKKMGIPLFADGKQKVDVTCVE-- 201 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 AL++A +EN S R +++T D P+ + + F E G Sbjct: 202 NVAYALRLA----------LENEKYS-RQTYNITND-EPIEFKEILTLFFNEMGTEGKYL 249 Query: 241 SKVYRI 246 YR+ Sbjct: 250 KWNYRL 255 >gi|148557998|ref|YP_001257509.1| UDP-glucose 4-epimerase [Brucella ovis ATCC 25840] gi|148369283|gb|ABQ62155.1| UDP-glucose 4-epimerase [Brucella ovis ATCC 25840] Length = 328 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVETMEKYVPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG++KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGRTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|194431526|ref|ZP_03063818.1| UDP-N-acetylglucosamine 4-epimerase [Shigella dysenteriae 1012] gi|194420351|gb|EDX36428.1| UDP-N-acetylglucosamine 4-epimerase [Shigella dysenteriae 1012] Length = 268 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 17 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKQNPDENHPHDPFNHYGKSKWQA 76 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 77 EEVLREWYN 85 >gi|91976088|ref|YP_568747.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisB5] gi|91682544|gb|ABE38846.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisB5] Length = 337 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V + +P + N + + AA + G+ I+ ST V+ RT Sbjct: 68 DAIIHFAGSVIVADSMRDPLAYYRNNTMTSRNLLSAAVTCGVKNFIFSSTAAVYGNPDRT 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E +PT PL+ YG SKL E + ++ NYV LR Sbjct: 128 PVPEEAPTRPLSPYGCSKLMTEIMLHDTASACGMNYVALR 167 >gi|296535670|ref|ZP_06897845.1| UDP-glucuronate 5'-epimerase [Roseomonas cervicalis ATCC 49957] gi|296263994|gb|EFH10444.1| UDP-glucuronate 5'-epimerase [Roseomonas cervicalis ATCC 49957] Length = 344 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ +P A+ + PD +++ AA V + D P S N +G + +AA + Sbjct: 73 LDIAEPGALAAVWAEARPDYVMHLAAQAGVRYSLDHPRAYTSANVDGFLEVLEAARHHPV 132 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 IY S+ V+ ++ P E P+++Y +K A E +Y + Y + LR Sbjct: 133 RHLIYASSSSVYGANTKVPFQERDAVEQPVSLYAATKRANELMAQTYAHLYRLPVTGLRF 192 Query: 148 AWVYSIFG 155 VY G Sbjct: 193 FTVYGPLG 200 >gi|238919226|ref|YP_002932741.1| UDP-N-acetylglucosamine 4-epimerase [Edwardsiella ictaluri 93-146] gi|16648662|gb|AAL25633.1| UDP-glucose 4-epimerase [Edwardsiella ictaluri 93-146] gi|238868795|gb|ACR68506.1| UDP-N-acetylglucosamine 4-epimerase [Edwardsiella ictaluri 93-146] Length = 323 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 17/144 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR------PDI----DLLKPKDFASFFLSF 49 MK +IG +G I L++ + VE V + P+ D+ KP+ Sbjct: 1 MKLAIIGGSGFIGTRLATQLKNNNVEFTIVDKRNSETFPECWQYGDVTKPESLEEPLKG- 59 Query: 50 SPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 DVIIN AA K P + + +N +GA + A+ + I I ++ G Sbjct: 60 -ADVIINLAAE---HKDNVHPISLYYDVNVQGAKNVCDVAEKLNIQHIVFTSSVAVYGFV 115 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE 132 E NP N YGKSKL E Sbjct: 116 EKETGEDGKYNPFNDYGKSKLEAE 139 >gi|148256949|ref|YP_001241534.1| UDP-galactose 4-epimerase [Bradyrhizobium sp. BTAi1] gi|146409122|gb|ABQ37628.1| UDP-galactose 4-epimerase [Bradyrhizobium sp. BTAi1] Length = 337 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D II+ A V ++ +P + + N ++ AA G+ I+ ST V+ + Sbjct: 68 DSIIHFAGSVVVPESVRDPLLYYRNNTMTTRSLLNAAVKRGVSRFIFSSTAAVYGNPEQV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E +PT P + YG SKL E + ++ NYV+LR Sbjct: 128 PVTETAPTRPTSPYGTSKLMAEIMLHDVATAHELNYVVLR 167 >gi|331268533|ref|YP_004395025.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] gi|329125083|gb|AEB75028.1| UDP-glucose 4-epimerase [Clostridium botulinum BKT015925] Length = 333 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 17/164 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + +I+ AAY+ V ++ + P F N + +A + G+ Sbjct: 55 DLQNQTLLNQIFTENDIESVIDFAAYSLVGESVENPLKYFDNNIVSTINLLEAMKNHGVK 114 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR--- 146 I S+ G ++ PI E TNP N YG+SKLA E+ + +Y Y ILR Sbjct: 115 NIVFSSTAATYGEPKSIPIKESDDTNPTNPYGESKLAVEKILKWCDKAYGIKYTILRYFN 174 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGT 181 A + G S+ + +L++A K+R +I + D + T Sbjct: 175 AAGAHINGQIGEDHRPESHLIPIILQVALKQRDKIMIFGDDYAT 218 >gi|189347364|ref|YP_001943893.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] gi|189341511|gb|ACD90914.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] Length = 330 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A D GI I ++ GL++ DE +P N YGKSK Sbjct: 79 LYYDVNVQGTKNVLDAMDHKGIKSIIFTSSVAVYGLNKKISDETHQADPFNHYGKSKWEA 138 Query: 132 EE 133 EE Sbjct: 139 EE 140 >gi|298377500|ref|ZP_06987452.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] gi|298265519|gb|EFI07180.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] Length = 654 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 368 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 427 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 428 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 459 >gi|89075610|ref|ZP_01162011.1| putative UDP-glucose 4-epimerase [Photobacterium sp. SKA34] gi|89048617|gb|EAR54190.1| putative UDP-glucose 4-epimerase [Photobacterium sp. SKA34] Length = 339 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 30/160 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---------------IRVGR-PDIDLLKP----- 39 M+ LV G G I S CVQ +E +GR ++ +KP Sbjct: 1 MRVLVTGGMGYIG---SHTCVQMIEAGMTPIIVDNLYNSKETVLGRIENLTGIKPAFYQG 57 Query: 40 --KDFA---SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 +D A S F+ D +I+ A AV ++ ++P + N G + +A + G+ Sbjct: 58 DIRDRAFLDSVFVENEIDAVIHFAGLKAVGESVEKPLEYYDNNVHGTLMLVEAMRAAGVN 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I+ S+ V+ + PI E PT+ N YG+SKL EE Sbjct: 118 ALIFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEE 157 >gi|83855397|ref|ZP_00948927.1| UDP-glucose 4-epimerase [Sulfitobacter sp. NAS-14.1] gi|83843240|gb|EAP82407.1| UDP-glucose 4-epimerase [Sulfitobacter sp. NAS-14.1] Length = 327 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + F + P +++ AA + V + +P + N EG+ + +A + G Sbjct: 51 DLLNRAEIDAAFEQYQPVAVMHFAALSQVGDSMKQPGTYWRNNVEGSLNLIEATVAAGCK 110 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE S +P+N YG SK A E+ + A+Y VI R Sbjct: 111 HFVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIEDILRDFEAAYGLQSVIFR 167 >gi|117924078|ref|YP_864695.1| UDP-galactose 4-epimerase [Magnetococcus sp. MC-1] gi|117607834|gb|ABK43289.1| UDP-galactose 4-epimerase [Magnetococcus sp. MC-1] Length = 337 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 A F + P +I+ A V ++ +P + + N + A + + G I S+ Sbjct: 58 LAGLFAQYQPQAVIHLAGRAYVGESMTDPALYYRNNVQAALVLLECMRQYGCKNIIFSSS 117 Query: 102 YVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G R PI E +P+N YG+SKL E + Y Sbjct: 118 CATYGEHRQMPITEAMSQHPINPYGRSKLMFEWMLQDY 155 >gi|325577346|ref|ZP_08147794.1| UDP-glucose 4-epimerase [Haemophilus parainfluenzae ATCC 33392] gi|325160670|gb|EGC72792.1| UDP-glucose 4-epimerase [Haemophilus parainfluenzae ATCC 33392] Length = 301 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 12/181 (6%) Query: 47 LSFSPDVIINPAAYTAVD-KAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYVF 104 L+ + DV+I+ AA ++ K DE E F +N + + +A DS IY S+ V Sbjct: 41 LNKNADVLIHLAAKSSDSYKTSDEKEY-FEVNRDLTIKLFQAFLDSKIKDFIYFSSAKVI 99 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLL 160 + + E +P NP+++YG+SK A EE + ++ +I+R V+ L+ Sbjct: 100 TDNAADCLTEETPLNPMSVYGRSKKAAEEYLLAHKLPEGKRLLIIRPCLVHGEGNHGNLI 159 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 ++ +L K + + F S L I I I L + + TS G++++ AD P+ Sbjct: 160 ALYKLVK--KGLPWFFAVFENKRSFLHIDNLIYCIDKLLEDRNITS--GVYNI-ADDQPI 214 Query: 221 S 221 S Sbjct: 215 S 215 >gi|229000003|ref|ZP_04159574.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] gi|229007522|ref|ZP_04165117.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] gi|228753660|gb|EEM03103.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock1-4] gi|228759687|gb|EEM08662.1| UDP-glucose 4-epimerase [Bacillus mycoides Rock3-17] Length = 330 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K F F + D +++ AA + V + ++P ++ N GA + + D I Sbjct: 53 LRDKSFLRDIFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKIDK 112 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR---- 146 I+ ST + + I E +PTNP N YG++KLA E+ + Y+ Y I R Sbjct: 113 FIFSSTAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKIFRYFNV 172 Query: 147 -TAWVYSIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 A I G ++ + +L++A +RE I + D + TP Sbjct: 173 AGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTP 216 >gi|148241183|ref|YP_001226340.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RCC307] gi|147849493|emb|CAK26987.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RCC307] Length = 361 Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 11/103 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIP--------CIYIST 100 PD++++ AA + VD++ D P S N G A+ +AA S G+ +IST Sbjct: 85 PDLVMHLAAESHVDRSIDGPGAFISSNVNGTFALLQAARSHWEGLSEERRSRFRFHHIST 144 Query: 101 DYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D VF L T E +P +P + Y SK A + V ++ + Y Sbjct: 145 DEVFGSLGATGRFSESTPYDPRSPYSASKAASDHLVNAWHHTY 187 >gi|327542941|gb|EGF29391.1| NAD-dependent epimerase/dehydratase [Rhodopirellula baltica WH47] Length = 290 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 14/127 (11%) Query: 54 IINPAAYTA---VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 +IN A YT VD E NA G + A + GIP ++S+ ++ G R Sbjct: 54 LINSAGYTGKPNVDACEIHKSECLDGNAIFPGTVRSACEHTGIPWGHVSSGCIYTG-RRP 112 Query: 111 PIDEFSPTNPLNI---------YGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSNFLL 160 D F+ +P N Y +K GEE +A N YV LR + + N+L Sbjct: 113 DGDGFTEADPPNFSFRTNNCSWYSGTKALGEEVLADADNAYVWRLRIPFNHQDSPRNYLS 172 Query: 161 SMLRLAK 167 ++R + Sbjct: 173 KLVRYER 179 >gi|194397707|ref|YP_002038457.1| NAD dependent epimerase/dehydratase family protein [Streptococcus pneumoniae G54] gi|194357374|gb|ACF55822.1| NAD dependent epimerase/dehydratase family protein [Streptococcus pneumoniae G54] Length = 233 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLXENQIDAVLHYTGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|209884469|ref|YP_002288326.1| UDP-glucose 4-epimerase [Oligotropha carboxidovorans OM5] gi|209872665|gb|ACI92461.1| UDP-glucose 4-epimerase [Oligotropha carboxidovorans OM5] Length = 330 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ + P+ E +PT PL+ YG SKL E + +Y NYV+LR Sbjct: 113 IFSSTAAVYGNPDQIPVPEIAPTRPLSPYGSSKLMTEIMLHDVATAYGLNYVVLR 167 >gi|161527634|ref|YP_001581460.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338935|gb|ABX12022.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 314 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII-----------------RVGRPDIDLLKPKDFA 43 +K L+ G NG I L+ + +I +V +D+ K+ Sbjct: 4 VKVLLTGANGFIGSHLADYLYNNYDIFLAVREFSNISNINHLKDKVNLSKLDITNFKEIQ 63 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STD 101 + PDV+I+ A T+ K+ ++P +N++ ++ + + C +I ST Sbjct: 64 NLLNEIKPDVVIHLAGETSHSKSFEDPIHDVEVNSKSTLYFLESIRKLQLKCTFILGSTF 123 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V P++E S P IY ++L+ E Y Y Sbjct: 124 IVIGKPISLPVNEKSVCIPTTIYATNRLSSEHFCKIYHQVY 164 >gi|152986904|ref|YP_001351555.1| oxidoreductase Rmd [Pseudomonas aeruginosa PA7] gi|150962062|gb|ABR84087.1| NAD-dependent epimerase/dehydratase family protein [Pseudomonas aeruginosa PA7] Length = 303 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 6/134 (4%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NG + + L D+ + P DL P+ S+ PD +I+ A T Sbjct: 6 LVTGLNGFVGRHLRQRIESHDLPWSLLPHPAFDLAVPESLESWRCEM-PDAVIHLAGQTF 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRT--PIDEFSPT 118 V + +P F +N G ++ +A G +YIS+ V+ + PI E Sbjct: 65 VPDSFLDPRRTFEVNFLGTLSLLQALKRNGFAGTFLYISSGDVYGQVPEAALPIHEEFLP 124 Query: 119 NPLNIYGKSKLAGE 132 P N Y SKLA E Sbjct: 125 RPRNPYAVSKLAAE 138 >gi|119615489|gb|EAW95083.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615490|gb|EAW95084.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615492|gb|EAW95086.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615496|gb|EAW95090.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615497|gb|EAW95091.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615498|gb|EAW95092.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] gi|119615499|gb|EAW95093.1| UDP-galactose-4-epimerase, isoform CRA_a [Homo sapiens] Length = 303 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F +S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELTGRSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|15600647|ref|NP_254141.1| oxidoreductase Rmd [Pseudomonas aeruginosa PAO1] gi|218894556|ref|YP_002443426.1| oxidoreductase Rmd [Pseudomonas aeruginosa LESB58] gi|254237862|ref|ZP_04931185.1| oxidoreductase Rmd [Pseudomonas aeruginosa C3719] gi|9951785|gb|AAG08839.1|AE004958_9 oxidoreductase Rmd [Pseudomonas aeruginosa PAO1] gi|126169793|gb|EAZ55304.1| oxidoreductase Rmd [Pseudomonas aeruginosa C3719] gi|218774785|emb|CAW30603.1| oxidoreductase Rmd [Pseudomonas aeruginosa LESB58] Length = 304 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97 Query: 95 C--IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ ++ PI E +P N Y SKLA E Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAE 139 >gi|312863422|ref|ZP_07723660.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] gi|311100958|gb|EFQ59163.1| UDP-glucose 4-epimerase [Streptococcus vestibularis F0396] Length = 333 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L ++F +PDV +I+ AAY+ V ++ ++P F N G + + + + Sbjct: 53 LADQEFMRKVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLIEVMNECDVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y YV LR Sbjct: 113 YIVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMKWSDQAYGIKYVPLR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G ++ L +L++A+ RE I + D + TP Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTP 217 >gi|145592309|ref|YP_001154311.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] gi|145284077|gb|ABP51659.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] Length = 314 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV+ + AA V + EP + F+ N + + A G+ ++ S+ V+ Sbjct: 64 DVVFHFAANPEVRISTTEPSVHFNENVLATFNVLEWARQTGVRTVVFASSSTVYGDAQVL 123 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 P E P P+++YG +K AGE +Y Y I Sbjct: 124 PTPEEEPLRPISVYGAAKAAGEIMCGTYARLYGI 157 >gi|169601778|ref|XP_001794311.1| hypothetical protein SNOG_03763 [Phaeosphaeria nodorum SN15] gi|111067848|gb|EAT88968.1| hypothetical protein SNOG_03763 [Phaeosphaeria nodorum SN15] Length = 323 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 21/145 (14%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII------NPAAYTAVDKA 66 AQ+ +S+ R+G P +D ++ D F S ++ P AY + Sbjct: 58 AQAFNSLSCH----FRIGEPFMDEIRTPDAVVHFAGTSIPILQLPYPSNPPKAYPQPMRL 113 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---------RTPIDEFSP 117 D F IN G+ I ++A +GI I +++ G++ P+ E SP Sbjct: 114 PDNE--TFRINTMGSYNIIESACKLGIKKIILASSITTYGVTYAEGDVDYPHFPLTETSP 171 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNY 142 T P+++Y SK+ E AS+ + Sbjct: 172 TEPMDVYATSKVCMERIAASFAKRF 196 >gi|45657997|ref|YP_002083.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601238|gb|AAS70720.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 320 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 11/111 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRT 110 + +I+ A A D +D P+ AF N G + AA + IY ST +V+ Sbjct: 72 EYVIHCAGMNAQDATKD-PQKAFEFNGHVTGRLMDAAIKNHSFKFIYFSTAHVYGNPLVG 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 + E SP + Y +S LAGE +V+ A + IFG N LS Sbjct: 131 NVSEASPLTNEHPYAQSNLAGEREVSD---------RAVLGKIFGVNLRLS 172 >gi|331695723|ref|YP_004331962.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] gi|326950412|gb|AEA24109.1| dTDP-glucose 4,6-dehydratase [Pseudonocardia dioxanivorans CB1190] Length = 335 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 75 SINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 +NA G + K+A + +P +Y+ST V+ + P+ E + P +YG SKLAGE Sbjct: 98 GVNATGTLGLLKSARAADVPRFVYVSTSEVYGSAPQVPMSEDNLALPTTVYGASKLAGEC 157 Query: 134 KVASYTNNY 142 ++ Y Sbjct: 158 YTRAFHRTY 166 >gi|269797722|ref|YP_003311622.1| UDP-glucose 4-epimerase [Veillonella parvula DSM 2008] gi|269094351|gb|ACZ24342.1| UDP-glucose 4-epimerase [Veillonella parvula DSM 2008] Length = 329 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA++ V ++ P I + N G+ + ++A + GI ++ ST V+ PI Sbjct: 69 VMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIKHFVFSSTAAVYGEPKVAPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILR 146 E + P N+YG++KL E+ ++ Y+ + YV LR Sbjct: 129 CEDAQLQPTNVYGRTKLMIEKMLSDYSSIYGSTYVALR 166 >gi|297197640|ref|ZP_06915037.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] gi|197715762|gb|EDY59796.1| UDP-glucose 4-epimerase [Streptomyces sviceus ATCC 29083] Length = 340 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 24/177 (13%) Query: 30 GRP-----DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 GRP +D+ A F + D +I+ AA+ AV ++ P + N G A+ Sbjct: 51 GRPLAAAYRVDVRDRLALAQVFTTHQVDAVIHFAAHKAVGESVALPVEYYDTNVGGTCAL 110 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGE---EKVASYTN 140 + + S+ G +RT P+ E SP P N Y ++KL E E V ++ Sbjct: 111 LSVMHEHAVRRLVFSSSCSVYGDARTVPLTEQSPVAPTNPYARTKLTCERILEDVCAHLT 170 Query: 141 NYVILRTAWVYSI--------------FGSNFLLSMLRLAKERRE-ISVVCDQFGTP 182 + +L + + +N + + ++A RRE +SV D + TP Sbjct: 171 DMKVLALRYFNPVGAHPGGLLGEDPQGIPNNVMPYVAQVAVGRRERLSVFGDDYPTP 227 >gi|254243006|ref|ZP_04936328.1| oxidoreductase Rmd [Pseudomonas aeruginosa 2192] gi|126196384|gb|EAZ60447.1| oxidoreductase Rmd [Pseudomonas aeruginosa 2192] Length = 304 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97 Query: 95 C--IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ ++ PI E +P N Y SKLA E Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAE 139 >gi|83941921|ref|ZP_00954383.1| UDP-glucose 4-epimerase [Sulfitobacter sp. EE-36] gi|83847741|gb|EAP85616.1| UDP-glucose 4-epimerase [Sulfitobacter sp. EE-36] Length = 327 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + F + P +++ AA + V + +P + N EG+ + +A + G Sbjct: 51 DLLNRAEIDAAFEQYQPVAVMHFAALSQVGDSMKQPGTYWRNNVEGSLNLIEATVAAGCK 110 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE S +P+N YG SK A E+ + A+Y VI R Sbjct: 111 HFVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIEDILRDFEAAYGLQSVIFR 167 >gi|307728831|ref|YP_003906055.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] gi|307583366|gb|ADN56764.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003] Length = 323 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 24/183 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQD----VEIIRVG----RPDIDLLKPK-DFAS----FFLSFS 50 LV G NG + ++L + + ++R G R + ++P DFA+ + + + Sbjct: 5 LVTGANGFVGRALIRLLLDTGHTVAGLVRRGGQLERGVNEWIEPSADFAAIEAGWPAALA 64 Query: 51 PDVIINPAAYTAV-DKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYIST-DYVFDG 106 D +++ AA V + +P AF + N EG +A+AA G+ +++S+ V + Sbjct: 65 ADCVVHLAARVHVMHEVSADPGAAFHATNVEGTLRVARAAWQHGVRRFVFVSSIKAVAET 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLSM 162 + P+ E P + YG+SKLA E+ +A Y + VI+R VY G + Sbjct: 125 DNGRPLTEDDAPAPEDPYGRSKLAAEQALARYARETGLDLVIVRPPLVY---GPGVRANF 181 Query: 163 LRL 165 LRL Sbjct: 182 LRL 184 >gi|261188648|ref|XP_002620738.1| UDP-glucose 4-epimerase [Ajellomyces dermatitidis SLH14081] gi|239593096|gb|EEQ75677.1| UDP-glucose 4-epimerase [Ajellomyces dermatitidis SLH14081] gi|239606250|gb|EEQ83237.1| UDP-glucose 4-epimerase [Ajellomyces dermatitidis ER-3] gi|327355970|gb|EGE84827.1| UDP-glucose 4-epimerase [Ajellomyces dermatitidis ATCC 18188] Length = 373 Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 11/135 (8%) Query: 17 SSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RPD ID+ D F PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEAINRIELICGKRPDFVKIDITNEADLDKAFEQH-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + +A + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYYVNVYGSICLLRAMKRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTNN 141 +K A E + + N+ Sbjct: 159 TKFAVETAITDFINS 173 >gi|332091798|gb|EGI96877.1| UDP-N-acetylglucosamine 4-epimerase [Shigella dysenteriae 155-74] Length = 331 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKQNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|239933212|ref|ZP_04690165.1| NDP-hexose 4-ketoreductase [Streptomyces ghanaensis ATCC 14672] gi|291441556|ref|ZP_06580946.1| NDP-hexose 4-ketoreductase [Streptomyces ghanaensis ATCC 14672] gi|291344451|gb|EFE71407.1| NDP-hexose 4-ketoreductase [Streptomyces ghanaensis ATCC 14672] Length = 300 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 21/160 (13%) Query: 1 MKCLVIGN----NGQIAQSLSSMCVQDVEIIRVGRP-----DIDLL--KPKDFASFFLSF 49 M+ LV+G G +A+ L ++ ++ GR +DL +P+ A S Sbjct: 1 MRILVLGTTGYLGGHVAERLRAL--PGTRVLAGGRSPAAEVTVDLASDRPRHLAKALASA 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFD-G 106 +PD ++N A T D +NA G + A + G +++ + + G Sbjct: 59 APDAVVNCAGATGGDAV-----TLAEVNARGPAVLCAALREAAPGARLVHLGSAAEYGPG 113 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 + E + T P YG +KLAG V + + V+LR Sbjct: 114 APGVRVAESAATRPAGPYGATKLAGTVAVTASGLDAVVLR 153 >gi|222445612|ref|ZP_03608127.1| hypothetical protein METSMIALI_01252 [Methanobrevibacter smithii DSM 2375] gi|222435177|gb|EEE42342.1| hypothetical protein METSMIALI_01252 [Methanobrevibacter smithii DSM 2375] Length = 334 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +IN AA + VD++ +PEI N G + AA G+ + ISTD V+ L T Sbjct: 75 DYVINFAAESHVDRSISDPEIFIKSNVLGTQVLLNAAKEYGVEKYVQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 E +P P + Y SK + + V +Y Sbjct: 135 GYFTETTPLQPNSPYSASKASADLVVRAY 163 >gi|114567456|ref|YP_754610.1| UDP-glucose 4-epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338391|gb|ABI69239.1| UDP-glucose 4-epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 302 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 24/173 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDIDLLKPKDF-----------A 43 MK L+ G G IA + + + ++ + GR ++LL P+ + A Sbjct: 1 MKILLTGGAGFIASHICDRLISEGHEVVVIDNLSTGR--LELLNPRAYFYQLDLCDPAIA 58 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 F P+++I+ AA +V +++ P N G+ + + + IY S+ Sbjct: 59 LVFQIEKPELVIHHAAQVSVSNSQENPVFDAVNNIIGSLNLYENCRQYKVKKIIYASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 ++ IDE P PL+ YG SK E + Y + ILR A VY Sbjct: 119 IYGEPLYLGIDEKHPVKPLSFYGLSKYLAEIYLRYYAGLFGLKFTILRYANVY 171 >gi|116053604|ref|YP_793931.1| oxidoreductase Rmd [Pseudomonas aeruginosa UCBPP-PA14] gi|313111607|ref|ZP_07797406.1| oxidoreductase Rmd [Pseudomonas aeruginosa 39016] gi|115588825|gb|ABJ14840.1| oxidoreductase Rmd [Pseudomonas aeruginosa UCBPP-PA14] gi|310883908|gb|EFQ42502.1| oxidoreductase Rmd [Pseudomonas aeruginosa 39016] Length = 304 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97 Query: 95 C--IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ ++ PI E +P N Y SKLA E Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAE 139 >gi|294827921|ref|NP_711815.2| UDP-glucose 4-epimerase [Leptospira interrogans serovar Lai str. 56601] gi|289450970|gb|ADC93887.1| UDP-glucose 4-epimerase [Leptospira interrogans serovar Canicola] gi|293385766|gb|AAN48833.2| UDP-glucose 4-epimerase [Leptospira interrogans serovar Lai str. 56601] Length = 317 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 11/111 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRT 110 + +I+ A A D +D P+ AF N G + AA + IY ST +V+ Sbjct: 69 EYVIHCAGMNAQDATKD-PQKAFEFNGHVTGRLMDAAIKNHSFKFIYFSTAHVYGNPLVG 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 + E SP + Y +S LAGE +V+ A + IFG N LS Sbjct: 128 NVSEASPLTNEHPYAQSNLAGEREVSD---------RAVLGKIFGVNLRLS 169 >gi|159186050|ref|NP_356484.2| UDP-glucose 4-epimerase [Agrobacterium tumefaciens str. C58] gi|159141184|gb|AAK89269.2| UDP-glucose 4-epimerase [Agrobacterium tumefaciens str. C58] Length = 328 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 5/160 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL++ G ++ E +R G D+ F P+ +++ AA Sbjct: 20 CLLLSERGYEPVVFDNLSNGHEEFVRWGPFEQGDIRDRARLDEVFAKHRPEAVLHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 V ++ +P + N G+ + AA G+ S+ GL + PIDE P Sbjct: 80 EVGESVKQPVAFYDNNVIGSLNLLSAAIDAGVTSFVFSSTCATYGLPEQVPIDETHRQAP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWV--YSIFGSNF 158 +N YG++K E+ + Y+ Y LR+ + ++ G++F Sbjct: 140 INPYGRTKWVVEQALKDYS-TYEGLRSVMLRYFNAAGADF 178 >gi|325268342|ref|ZP_08134975.1| NAD-dependent epimerase [Prevotella multiformis DSM 16608] gi|324989484|gb|EGC21434.1| NAD-dependent epimerase [Prevotella multiformis DSM 16608] Length = 329 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 12/116 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL- 107 D +++ A T ED F +N +G + +A +G P +++S+ +F + Sbjct: 69 DYVVHAAGVTKCLDKED----FFRVNRDGTRKLVQALQELGQPLERFVFLSSLSIFGAIR 124 Query: 108 SRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 + P E PT+ P YGKSKL E + S + VILR VY ++ L Sbjct: 125 EQQPYGEIEPTDTPRPNTAYGKSKLEAEASIPS-SFPCVILRPTGVYGPREKDYFL 179 >gi|315038810|ref|YP_004032378.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325957251|ref|YP_004292663.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|312276943|gb|ADQ59583.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325333816|gb|ADZ07724.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|327183973|gb|AEA32420.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1118] Length = 330 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 23/156 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVG-RPDIDLLKPK------DFASFFL 47 MK LVIG G I V++ ++ + G R +D PK D FL Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVD---PKAKFYQGDIEDTFL 57 Query: 48 ------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 D +++ AAY+ V ++ +P + N G ++ KA + G + S+ Sbjct: 58 VSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVAGMISLLKAMNDAGTKYLVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ + PI E +P NP+N YG++K+ E+ +A Sbjct: 118 AATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMA 153 >gi|260596016|ref|YP_003208587.1| dTDP-glucose 4,6-dehydratase [Cronobacter turicensis z3032] gi|260215193|emb|CBA27031.1| dTDP-glucose 4,6-dehydratase [Cronobacter turicensis z3032] Length = 365 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 16/129 (12%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + F F PDV+++ AA + VD++ D P N G + +A Sbjct: 62 RFAFEQVDICDAQSLDRLFTQFKPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 121 Query: 88 ----------ADSIGIPCIYISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEE 133 A+ +ISTD V+ L +D+F +P P + Y SK + Sbjct: 122 ARRYWSELADAEKTAFRFHHISTDEVYGDLH--GLDDFFTETTPYAPSSPYSASKAGSDH 179 Query: 134 KVASYTNNY 142 V ++ Y Sbjct: 180 LVRAWRRTY 188 >gi|296328293|ref|ZP_06870822.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154597|gb|EFG95385.1| DTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 328 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 26/176 (14%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 +++N G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 86 YNVNVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 145 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L K+ ++++ + C + Sbjct: 146 AENIIKSSKLNYMIIRPRGLFGVGDTSIIPRLLELNKKIGIPLFVDGKQKVDITCVE--N 203 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 AL++A +EN+ S R I+++T D P+ + F E G Sbjct: 204 VAYALRLA----------LENNQYS-RQIYNITND-EPIEFKKILTLFFNEIGTEG 247 >gi|264676244|ref|YP_003276150.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni CNB-2] gi|299533420|ref|ZP_07046802.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni S44] gi|262206756|gb|ACY30854.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni CNB-2] gi|298718626|gb|EFI59601.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni S44] Length = 336 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DL + A F +P +++ AA V + D+P+ N G G I + Sbjct: 60 ELDLADRQGMADLFAEAAPSKVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNILQGCRKHQ 119 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW- 149 + +Y S+ V+ G +R P E + P++ Y +K A E SY + Y I T Sbjct: 120 VEHLVYASSSSVYGGNTRMPFAESDAVDHPISYYAATKKANELMAHSYAHLYGIPTTGLR 179 Query: 150 VYSIFG 155 ++++G Sbjct: 180 FFTVYG 185 >gi|256390665|ref|YP_003112229.1| UDP-glucose 4-epimerase [Catenulispora acidiphila DSM 44928] gi|256356891|gb|ACU70388.1| UDP-glucose 4-epimerase [Catenulispora acidiphila DSM 44928] Length = 323 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 21/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 M+ LVIG G + S++ V+ V+ + G D D+L + Sbjct: 1 MRLLVIGGAGYVGSVTSAVLVEAGHEVTVVDDLSTGHRDAVPAGAAFRHADVLDQRQLGD 60 Query: 45 FFLSFSP----DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIS 99 + D I++ AA + V ++ EP F N + +A GI I + S Sbjct: 61 VLREVAAGGPIDAILHFAARSLVGESVVEPARYFRHNITTTANLLEAMRDHGIGTIVFSS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 T + TPI E PT P N YG SKLA ++ + Y I + Y Sbjct: 121 TAACYGEPDATPITEDMPTVPTNPYGASKLAADQMLTFAAPAYGIAAVSLRY 172 >gi|255657910|ref|ZP_05403319.1| dTDP-glucose 4,6-dehydratase [Mitsuokella multacida DSM 20544] gi|260850102|gb|EEX70109.1| dTDP-glucose 4,6-dehydratase [Mitsuokella multacida DSM 20544] Length = 347 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 16/146 (10%) Query: 10 GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 G + S+M ++ + IR D+ + F PD+++N AA + VD++ + Sbjct: 39 GNLETLESAMEKKNFKFIRA-----DIADRRAVYRIFEQEKPDIVVNFAAESHVDRSIEN 93 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRTPIDE----FSPTNPLNI- 123 PEI N G + A GI + +STD V+ L P+D F+ L Sbjct: 94 PEIFLQTNVIGTSVLLDACRKYGIDRYHQVSTDEVYGDL---PLDRPDLFFTEETNLKTS 150 Query: 124 --YGKSKLAGEEKVASYTNNYVILRT 147 Y SK + V +Y Y I T Sbjct: 151 SPYSASKAGADLLVMAYHRTYKIPTT 176 >gi|254373155|ref|ZP_04988644.1| hypothetical protein FTCG_00737 [Francisella tularensis subsp. novicida GA99-3549] gi|151570882|gb|EDN36536.1| hypothetical protein FTCG_00737 [Francisella novicida GA99-3549] Length = 319 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 14/168 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K V G+NG + +++ + +D +++I R D+DLLK FF D I AA Sbjct: 3 KIFVAGHNGMVGSAITRLLSKDKTIQVITRNRKDLDLLKQNQVYDFFQREKIDEIYLAAA 62 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDE--- 114 A ++ P N I +A I +++ + ++ L++ PI E Sbjct: 63 KVGGIHANNQYPADFIYENLIIEANIIHSAHMANIQKLLFLGSSCIYPKLAKQPISEEAL 122 Query: 115 ----FSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSN 157 PTN Y +K+AG + SY Y R+ +++G N Sbjct: 123 LTGTLEPTNE--PYAIAKIAGIKLCESYNRQYARDYRSVMPTNLYGIN 168 >gi|32442215|gb|AAP82176.1| UDP glucose 4-epimerase [Streptococcus agalactiae] Length = 330 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 33/201 (16%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L K F +PDV +I+ AA++ V ++ + P F N G + + + I Sbjct: 53 LSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I S+ G+ + PI E +P NP+N YG+SKL E I++ W Sbjct: 113 NIVFSSTAATYGIPEQVPILETAPQNPINPYGESKLMME----------TIMK--WADQA 160 Query: 154 FGSNFL-LSMLRLAKERREISVVCDQFGTPTSA-----LQIARAI---IQIAHNLIENSD 204 +G F+ L +A ++ + S+ D P + LQ+A+ + I I + D Sbjct: 161 YGIKFVALRYFNVAGDKPDGSIGEDH--KPETHLLPIILQVAQGVRDKIMILEDDSHTPD 218 Query: 205 -TSLRGIFHMTADGGPVSWAD 224 T++R H P W D Sbjct: 219 GTNVRDYVH------PFDWPD 233 >gi|125974819|ref|YP_001038729.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum ATCC 27405] gi|125715044|gb|ABN53536.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum ATCC 27405] Length = 614 Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PDV+ + AA+ V ED P A N G +A+ AD G + ISTD Sbjct: 352 NIFKKYRPDVVFHAAAHKHVPLMEDNPTEAIKNNVFGTLNVAECADKYGTKRFVLISTD- 410 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G +K E + + N +T +V FG+ Sbjct: 411 -------------KAVNPTNIMGATKRIAEMIIQAMNENS---KTEFVAVRFGN 448 >gi|256004922|ref|ZP_05429895.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum DSM 2360] gi|281418726|ref|ZP_06249745.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum JW20] gi|255991102|gb|EEU01211.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum DSM 2360] gi|281407810|gb|EFB38069.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum JW20] gi|316941941|gb|ADU75975.1| polysaccharide biosynthesis protein CapD [Clostridium thermocellum DSM 1313] Length = 614 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PDV+ + AA+ V ED P A N G +A+ AD G + ISTD Sbjct: 352 NIFKKYRPDVVFHAAAHKHVPLMEDNPTEAIKNNVFGTLNVAECADKYGTKRFVLISTD- 410 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G +K E + + N +T +V FG+ Sbjct: 411 -------------KAVNPTNIMGATKRIAEMIIQAMNENS---KTEFVAVRFGN 448 >gi|253575887|ref|ZP_04853221.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844681|gb|EES72695.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. oral taxon 786 str. D14] Length = 315 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F + D+ + A V + D+P F+ + G I + +++ST Sbjct: 64 LEELFAAHQFDICYHLGASINVQDSIDDPRTTFNNDTVGTFYILEQCRRYNTKVVFMSTC 123 Query: 102 YVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 V+D + T I E PT P + Y +K+A E V SY Y V++R Y F Sbjct: 124 MVYDRCTDETGITELHPTKPASPYAGAKVAAENMVLSYYYAYGLPTVVIRPFNTYGPF 181 >gi|119871524|ref|YP_929531.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] gi|119672932|gb|ABL87188.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] Length = 300 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 36/182 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK---------------DFASF 45 M+ L+ G G I +L+ + + E+ RP KP+ D A+ Sbjct: 1 MRILIFGGLGFIGANLAE-ALSEYELYVAHRPGSREAKPQVARFVAQYATLLEYTDPATA 59 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYISTDYV 103 F P V+IN V + + + NAE + AA G ++ S V Sbjct: 60 FEKTRPHVVIN-----LVGQYYGRSQELWQANAEFPRLLCDAARRAGWRGKVVHFSAATV 114 Query: 104 FDGLSRTPIDEFSPTNPLNIYG--------KSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 R P+ L+++G +SK AGEE VA+ N++VI+R A VY F Sbjct: 115 -----RGPVGAIIEEEELHLHGVVPDNDFDRSKAAGEEAVANCFNDWVIVRPALVYGRFN 169 Query: 156 SN 157 ++ Sbjct: 170 TH 171 >gi|296135271|ref|YP_003642513.1| UDP-glucose 4-epimerase [Thiomonas intermedia K12] gi|295795393|gb|ADG30183.1| UDP-glucose 4-epimerase [Thiomonas intermedia K12] Length = 340 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 10/141 (7%) Query: 3 CLVIGNNGQIAQSLSSMC------VQDVEIIRVGRP---DIDLLKPKDFASFFLSFSPDV 53 C+V+ G I ++C + VE I RP D+ + F D Sbjct: 20 CVVLIEAGYIPVVYDNLCNSSVESLARVERITGKRPAFVQADIRDAARLDAVFAQHKIDA 79 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + +A + I+ S+ V+ + TPI Sbjct: 80 VIHFAGLKAVGESVEKPLMYYDNNVGGTVVLLEAMQRAKVHNLIFSSSATVYGDPASTPI 139 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL EE Sbjct: 140 REDFPLSATNAYGRSKLMIEE 160 >gi|53713858|ref|YP_099850.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis YCH46] gi|52216723|dbj|BAD49316.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis YCH46] Length = 298 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--DVIINPA 58 MK L G +G + +++ + + I VG D K D A F+ DV+++ A Sbjct: 1 MKLLFTGASGFLGRNIYQLLEKTYVIKTVGLTSQDDYKI-DIARNIPVFTEVFDVVLHAA 59 Query: 59 AYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDEF 115 ++ K +E ++ F +N +G + A ++ GIP I+IST V+ S I E Sbjct: 60 GKAHSIPKTGEEKQLFFDVNLQGTKNLCTALENSGIPKAFIFISTVAVYGCDSGENITEE 119 Query: 116 SPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 P N Y SK+ E+ + A + ILR + + L +M+R + + Sbjct: 120 HPLNGTTPYALSKIKAEKYLEGWCAMHNVKLSILRPSLIAGPNPPGNLGAMIRGIRNGKY 179 Query: 172 ISV 174 +S+ Sbjct: 180 LSI 182 >gi|2494670|sp|Q59745|EXOB_RHILT RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1360122|emb|CAA65359.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum] Length = 327 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E +R G + D+ P I++ AA Sbjct: 20 CLDLANKGYRPVVFDNFSNGHREFVRWGPAEEGDIRDRARLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKYIVEQALADY-DQYGSLRS 165 >gi|150007080|ref|YP_001301823.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Parabacteroides distasonis ATCC 8503] gi|149935504|gb|ABR42201.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Parabacteroides distasonis ATCC 8503] Length = 654 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 368 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 427 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 428 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 459 >gi|116253418|ref|YP_769256.1| UDP-glucuronate 5'-epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115258066|emb|CAK09166.1| putative UDP-glucuronate 5'-epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 338 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 21/204 (10%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFD 105 L+ PD++I+ AA V + + PE N EG+ I + A + I + + ST ++ Sbjct: 73 LAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGSWNILEIARRVEIRHLMLASTSSIYG 132 Query: 106 GLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG-------S 156 + P E + PL IY +K + E SY + + I TA+ ++++G + Sbjct: 133 ANATVPFRETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYGPWGRPDMA 192 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA------HNLIENSDT---SL 207 F + LA + EI + T + AI++++ N +EN+ S Sbjct: 193 LFKFTKNMLAGQPIEIYGEGNMSRDFTYIDDLIEAIVRLSAVVPSEENRLENTAVETLSR 252 Query: 208 RGIFHMTADGG--PVSWADFAEYI 229 + F + GG PVS DF E + Sbjct: 253 QAPFRVVNIGGGQPVSLMDFVETV 276 >gi|312877746|ref|ZP_07737698.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor lactoaceticus 6A] gi|311795465|gb|EFR11842.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor lactoaceticus 6A] Length = 352 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 10/107 (9%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---------GIPCI 96 F + DV++N AA + VD++ +P I N G + A + G I Sbjct: 72 FEEYEIDVVVNFAAESHVDRSIIDPHIFIKTNVLGTQTLLDVAKNFWYKNGKWTDGKRFI 131 Query: 97 YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 132 QISTDEVYGSLGETGYFTEKTPLDPHSPYSASKAAADLIVKAYFDTY 178 >gi|301311257|ref|ZP_07217185.1| Cap5D [Bacteroides sp. 20_3] gi|300830831|gb|EFK61473.1| Cap5D [Bacteroides sp. 20_3] Length = 654 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 368 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 427 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 428 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 459 >gi|300710894|ref|YP_003736708.1| GDP-mannose 4,6-dehydratase [Halalkalicoccus jeotgali B3] gi|299124577|gb|ADJ14916.1| GDP-mannose 4,6-dehydratase [Halalkalicoccus jeotgali B3] Length = 359 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 2/113 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL PD I N A + V + D+P+ +NA G + +A G+ Sbjct: 69 DLTDGSSIRRVIREVEPDEIYNLGAQSHVAVSYDQPDYTAEVNALGTLRVLEAIRETGVD 128 Query: 95 CIY--ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 + ST +F + TP DE + +P + Y +KL +Y + Y I Sbjct: 129 ARFYQASTSELFGNATETPQDESTRFDPESPYASAKLYAHHITKNYRDAYDIF 181 >gi|167524601|ref|XP_001746636.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774906|gb|EDQ88532.1| predicted protein [Monosiga brevicollis MX1] Length = 327 Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GL 107 D I++ AA T VD++ N G + +AA +++STD V+ G Sbjct: 90 DTILHFAAQTHVDRSFANSFSFTHNNMLGTHVMLEAAKLF----VHVSTDEVYGETVPGE 145 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 R +++ SP NP N Y SK A E V +Y +Y Sbjct: 146 DRHFLEKISPLNPTNPYAASKAAAEMMVKAYQKSY 180 >gi|262381074|ref|ZP_06074212.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296251|gb|EEY84181.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 646 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 360 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 419 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 420 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 451 >gi|271499807|ref|YP_003332832.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] gi|270343362|gb|ACZ76127.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech586] Length = 354 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCI------- 96 F +F PD +++ AA + VD++ D P N G + +AA +P + Sbjct: 69 FTTFQPDAVMHLAAESHVDRSIDGPSAFIETNITGTYTLLEAARQYWSALPQVRKEAFRF 128 Query: 97 -YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD V+ L T E +P P + Y SK A + V ++ Y Sbjct: 129 HHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAASDHLVRAWLRTY 177 >gi|256840237|ref|ZP_05545745.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737509|gb|EEU50835.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 649 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 363 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 422 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 423 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 454 >gi|255015295|ref|ZP_05287421.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Bacteroides sp. 2_1_7] Length = 649 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G IA AA S G+ Sbjct: 363 DVRNPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAVRTNVFGTRVIADAAVSYGVE 422 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 423 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 454 >gi|305679689|ref|ZP_07402499.1| dTDP-glucose 4,6-dehydratase [Corynebacterium matruchotii ATCC 14266] gi|305660309|gb|EFM49806.1| dTDP-glucose 4,6-dehydratase [Corynebacterium matruchotii ATCC 14266] Length = 361 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AA T VD + +P N G A+ +A YISTD VF L T Sbjct: 97 DVVVHFAAETHVDASLRDPAAFVHSNVVGTFALLEAIRKYDTRLHYISTDEVFGDLELTD 156 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 F SP NP + Y +K + V ++ ++ I Sbjct: 157 SRRFTETSPYNPSSPYSATKAGADHLVRAWIRSFNI 192 >gi|257056728|ref|YP_003134560.1| UDP-galactose 4-epimerase [Saccharomonospora viridis DSM 43017] gi|256586600|gb|ACU97733.1| UDP-galactose 4-epimerase [Saccharomonospora viridis DSM 43017] Length = 321 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 + AS L+ D +++ AA + V ++ +P + N + + +A + G+ ++ S Sbjct: 54 EVASTLLAEGFDGVLHFAAKSLVGESMQDPGAYWRGNVLTSLRLLEAMRTHGVQRLVFSS 113 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 T + TPI E +PT P N YG +KLA + + SY + Sbjct: 114 TAATYGEPETTPIPETAPTAPTNTYGATKLAIDHAITSYARAH 156 >gi|134098355|ref|YP_001104016.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|291006943|ref|ZP_06564916.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|133910978|emb|CAM01091.1| UDP-glucose 4-epimerase [Saccharopolyspora erythraea NRRL 2338] Length = 320 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 27/198 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR----PDIDLLKPKDFASF---FL 47 MK LV G G + ++ ++ V+ + G PD D A L Sbjct: 1 MKLLVTGGAGYVGSVCAARLLEAGHEVVVVDDLSTGHADAIPDGCKFVEADIAEAAGDLL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + S D +++ AA + V ++ EP + N + + +A G P ++ ST + Sbjct: 61 ADSFDGVLHFAAKSLVGESMQEPFKYWHGNVVTSLRLLEAVREHGTPRLVFSSTAATYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFGSNFL 159 PI E +PT P N YG +KLA + ++SY + V LR A + FG Sbjct: 121 PENVPITEDAPTRPTNTYGATKLAIDHAISSYAAAHGLAAVSLRYFNVAGAHGAFGERHT 180 Query: 160 LS------MLRLAKERRE 171 + +L++A +RE Sbjct: 181 VETHLIPIVLQVALGQRE 198 >gi|50954306|ref|YP_061594.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950788|gb|AAT88489.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 301 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 20/149 (13%) Query: 2 KCLVIGNNGQIAQSLSSM----------CVQDVEIIRVGRPDIDLLKPK--DFASFFLS- 48 + LV+G G + +++S+ V+D+ ++ GR D L D S L Sbjct: 4 RVLVLGATGMLGSTVASILRRSGHDVTGTVRDLALVPAGRRDRHRLFDAFADDPSGLLEG 63 Query: 49 -FSPDVIINPAA----YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 S D +IN + D A D A INAE A+A+AA + I I+TD V Sbjct: 64 LSSGDYVINCIGLIKHHLRDDDAGDRYN-AIKINAELPYALARAAGERNVRVIQIATDCV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + G + DE + + ++YG+SK GE Sbjct: 123 YSGQT-GRYDETTAHDATDVYGQSKSLGE 150 >gi|78043738|ref|YP_359403.1| UDP-glucose 4-epimerase [Carboxydothermus hydrogenoformans Z-2901] gi|77995853|gb|ABB14752.1| UDP-glucose 4-epimerase [Carboxydothermus hydrogenoformans Z-2901] Length = 327 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 F + +I+ AA + V ++ +PE F N ++ K + ++ ST Sbjct: 59 EIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 V+ + PI E P P N+YG SKL E+ + Y NYV LR Sbjct: 119 VYGEPEKWPITEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLR 166 >gi|317504446|ref|ZP_07962425.1| NAD-dependent epimerase [Prevotella salivae DSM 15606] gi|315664434|gb|EFV04122.1| NAD-dependent epimerase [Prevotella salivae DSM 15606] Length = 331 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 13/142 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R+ +++L KD D +++ A T A+D + IN +G + +A Sbjct: 44 RIHFIELNLSSEKDLEKQLAGHEFDYVVHAAGVTKCLHADD----FYKINTDGTRHLVEA 99 Query: 88 ADSIGIPC---IYISTDYVFDGLS-RTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTN 140 ++ +P IY+S+ V+ + + P E + + P YGKSKL E + N Sbjct: 100 LLALHMPIRRFIYLSSLSVYGAIKEQQPYHEITEDDHPKPNTAYGKSKLMAEAYLERVGN 159 Query: 141 N--YVILRTAWVYSIFGSNFLL 160 + Y+ILR VY ++ L Sbjct: 160 DFPYIILRPTGVYGPRERDYFL 181 >gi|302346103|ref|YP_003814456.1| RmlD substrate binding domain protein [Prevotella melaninogenica ATCC 25845] gi|302149767|gb|ADK96029.1| RmlD substrate binding domain protein [Prevotella melaninogenica ATCC 25845] Length = 329 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 12 IAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 + ++ S +QD + I + +D LK + F D +++ A T ED Sbjct: 32 VRRTSSREYLQDERIHFIELDFSSVDKLKEQLSGHQF-----DYVVHAAGVTKCLNKED- 85 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL-SRTPIDEFSPTN---PLN 122 F +N +G +A ++ P +++S+ +F + + P E PT+ P Sbjct: 86 ---FFRVNRDGTRNFVEALQALNQPLERFVFLSSLSIFGAIREQQPYKEIEPTDTPQPNT 142 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 YGKSKL E+ + S + Y+ILR VY ++ L Sbjct: 143 AYGKSKLEAEQLLPS-SFPYIILRPTGVYGPREKDYFL 179 >gi|294675733|ref|YP_003576348.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] gi|294474553|gb|ADE83941.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] Length = 353 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 11/104 (10%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGIPCIY----ISTD 101 PD +++ AA + VD++ D P + N G + +AA + G P + ISTD Sbjct: 76 QPDAVMHLAAESHVDRSIDGPGVFIETNVMGTYQMLQAARQHWEGRGRPGTFRFHHISTD 135 Query: 102 YVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 VF L P +F +P +P + Y SK + V ++ Y Sbjct: 136 EVFGSLPHDPQVKFTEDTPYDPRSPYSASKAGSDHLVRAWHETY 179 >gi|220909164|ref|YP_002484475.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] gi|219865775|gb|ACL46114.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] Length = 353 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL A+ F + + AA T+ ++ P +S N + + + Sbjct: 52 DLADRNRLAATFTQHKITAVFHFAARTSAPESVQHPLEYYSNNTCNTLTLLQLCQRFAVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I+ ST V+ + P+ E +PT P+N YG+SKL E + Y YVILR Sbjct: 112 QFIFSSTAAVYGEPEQNPVSETAPTLPINPYGRSKLMSEWLIQDYAAASEMRYVILR 168 >gi|149278974|ref|ZP_01885108.1| NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149230253|gb|EDM35638.1| NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 316 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 21/160 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-----DVEIIRVGRPDIDL-----------LKPKDFASF 45 K LV+G+NGQI L + + +V + RPD D+ L+ + Sbjct: 4 KILVLGSNGQIGTELVTALRKTYGEDNVVACDIRRPDYDIKNSGPFEFVNVLEKDILNNI 63 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F + P + AA + E P++A+ +N G I A + +Y + Sbjct: 64 FQKYKPTQVYLLAALLSA-TGEQNPKLAWDLNMNGLLNILDLAITYKTAKVYWPSSIAVF 122 Query: 106 GLSRTPID---EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +P D ++ +P +YG SKLAGE Y + Sbjct: 123 G-PNSPKDHTPQYCVMDPNTVYGISKLAGERWCEYYNQKF 161 >gi|125995247|dbj|BAF47162.1| hypothetical protein [Gloeothece sp. KO68DGA] Length = 301 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 36/302 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC---VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + +++G++G I +L + V ++E+I PD DL K D S L+ D Sbjct: 13 RVIILGHSGFIGSNLFRVYNHYVPEIEVIGRSLPDFDLTKESDVIS--LANLCDQQTAIV 70 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 +A+ + + AFS N + + + + + IY S+ V+ + + T I E + Sbjct: 71 MCSAIKRQLGDTLDAFSQNVKMVSNLCRLLNKYPVKRLIYFSSAAVYGEDIHNTNITEKT 130 Query: 117 PTNPLNIYGKSKLAGE-------EKVASYTNNYVILRTAWVYSIFGSNFLLS---MLRLA 166 P NP + YG +K E KV + V LR A +Y S S +R A Sbjct: 131 PVNPTSYYGGAKYTSEFLLRKQFSKVPE--TSLVCLRPATIYGPGDSGSAYSPSGFIRSA 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + I++ D GT ++++ LI N GI ++ + G S+ D Sbjct: 189 LNQDTITLWGD--GTELREFLFIEDVVKLVDKLIFN---EYDGILNLVS-GKSYSFRDIL 242 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH-NIRISTWKEGVRN 285 + I G + K+ I + TK +C D ++L ++ KEG++ Sbjct: 243 DLI--------GHHLKIKLITNSRSRTK--EKVDNCFDNNQLTEIFPEFTFTSLKEGIKQ 292 Query: 286 IL 287 + Sbjct: 293 TI 294 >gi|108999125|ref|XP_001104086.1| PREDICTED: UDP-glucose 4-epimerase-like isoform 2 [Macaca mulatta] gi|108999128|ref|XP_001104169.1| PREDICTED: UDP-glucose 4-epimerase-like isoform 3 [Macaca mulatta] gi|108999131|ref|XP_001104253.1| PREDICTED: UDP-glucose 4-epimerase-like isoform 4 [Macaca mulatta] Length = 348 Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELAGCSVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|126178155|ref|YP_001046120.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125860949|gb|ABN56138.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 333 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V + ++P +NA G + +A+ G+ I S+ V+ + Sbjct: 98 DYVFHEAAQAGVRISVEDPIKPHEVNATGTLNLLEASRDSGVKKIINASSSSVYGTVEYL 157 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 P DE P P++ YG SKLA EE ++ Y + + Y +++G Sbjct: 158 PFDEDHPRRPVSPYGVSKLAAEEYCRVFSELYGLKSVSLRYFTVYG 203 >gi|242777735|ref|XP_002479094.1| UDP-glucose 4-epimerase [Talaromyces stipitatus ATCC 10500] gi|218722713|gb|EED22131.1| UDP-glucose 4-epimerase [Talaromyces stipitatus ATCC 10500] Length = 372 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S+ V +E+I +P+ D+ P F F ++ PD+ +I+ AA AV ++ ++P Sbjct: 40 SAEVVNRIELICGKKPEFVQADITDPTAFDKVFTAY-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G + ++ + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYLVNVYGTINLLRSMQKHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K A E + + N Sbjct: 159 TKFAVETAITDFIN 172 >gi|67970160|dbj|BAE01424.1| unnamed protein product [Macaca fascicularis] Length = 348 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 9/146 (6%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 G + +SL VQ++ V ++D+L F S +I+ A AV ++ Sbjct: 41 GGGSLPESLRR--VQELAGCSVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESV 98 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYG 125 +P + +N G + + + G+ ++ S+ V+ P+DE PT N YG Sbjct: 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 Query: 126 KSKLAGEEKV-----ASYTNNYVILR 146 KSK EE + A T N V+LR Sbjct: 159 KSKFFIEEMIRDLCQADKTWNAVLLR 184 >gi|22298001|ref|NP_681248.1| dTDP-glucose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] gi|22294179|dbj|BAC08010.1| dTDP-glucose 4,6-dehydratase [Thermosynechococcus elongatus BP-1] Length = 359 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIP--------CIY 97 SF PD +I+ AA + VD++ + P+ N G + + + +P I+ Sbjct: 72 SFQPDAVIHFAAESHVDRSINSPQDFIQTNVVGTANLLEEVKTYWQQLPPGAQERFRFIH 131 Query: 98 ISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L P E +P P + Y SK A + V +Y + Y Sbjct: 132 ISTDEVYGSLGPEDPPFREDTPYAPNSPYAASKAASDHLVRAYHHTY 178 >gi|76787748|ref|YP_330477.1| UDP-glucose 4-epimerase [Streptococcus agalactiae A909] gi|77405023|ref|ZP_00782123.1| UDP-glucose 4-epimerase [Streptococcus agalactiae H36B] gi|77407866|ref|ZP_00784618.1| UDP-glucose 4-epimerase [Streptococcus agalactiae COH1] gi|76562805|gb|ABA45389.1| UDP-glucose 4-epimerase [Streptococcus agalactiae A909] gi|77173511|gb|EAO76628.1| UDP-glucose 4-epimerase [Streptococcus agalactiae COH1] gi|77176317|gb|EAO79086.1| UDP-glucose 4-epimerase [Streptococcus agalactiae H36B] Length = 331 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L K F +PDV +I+ AA++ V ++ + P F N G + + + I Sbjct: 53 LSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E +P NP+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEQVPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKE-RREISVVCDQFGTP 182 +++ G ++ L +L++A+ R +I + D + TP Sbjct: 170 YFNVAGDKPDGSIGEDHKPETHLLPIILQVAQGVRDKIMIFGDDYNTP 217 >gi|303244409|ref|ZP_07330745.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] gi|302485304|gb|EFL48232.1| NAD-dependent epimerase/dehydratase [Methanothermococcus okinawensis IH1] Length = 324 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 6/107 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLSR 109 DV+I+ AA V + ++P +IN G + + + I S V+ Sbjct: 88 DVVIHHAAQINVRTSVEKPVYDGNINILGTINLLEKIRQYDVKKIIFASSGGAVYGEPHY 147 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+DE P PL YG SK GEE + Y NY ILR A V+ Sbjct: 148 MPVDEKHPVAPLCPYGMSKYCGEEYIKLYNRLYGLNYTILRYANVFG 194 >gi|228993934|ref|ZP_04153836.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] gi|228765732|gb|EEM14384.1| UDP-glucose 4-epimerase [Bacillus pseudomycoides DSM 12442] Length = 330 Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 37 LKPKDFA-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K F F + D +++ AA + V + ++P ++ N GA + + D I Sbjct: 53 LRDKSFLRDVFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKIDK 112 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR---- 146 I+ ST + + I E +PTNP N YG++KLA E+ + Y+ Y I R Sbjct: 113 FIFSSTAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKIFRYFNV 172 Query: 147 -TAWVYSIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 A I G ++ + +L++A +RE I + D + TP Sbjct: 173 AGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTP 216 >gi|288801841|ref|ZP_06407283.1| NAD dependent epimerase/reductase-related protein [Prevotella melaninogenica D18] gi|288335883|gb|EFC74316.1| NAD dependent epimerase/reductase-related protein [Prevotella melaninogenica D18] Length = 329 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 12 IAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 + ++ S +QD + I + +D LK + F D +++ A T ED Sbjct: 32 VRRTSSREYLQDERIHFIELDFSSVDKLKEQLSGHQF-----DYVVHAAGVTKCLNKED- 85 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL-SRTPIDEFSPTN---PLN 122 F +N +G +A ++ P +++S+ +F + + P E PT+ P Sbjct: 86 ---FFRVNRDGTRNFVEALQALNQPLERFVFLSSLSIFGAIREQQPYKEIEPTDTPQPNT 142 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 YGKSKL E+ + S + Y+ILR VY ++ L Sbjct: 143 AYGKSKLEAEQLLPS-SFPYIILRPTGVYGPREKDYFL 179 >gi|85813787|emb|CAF31840.1| putative NDP-heptose/hexose dehydrogenase [Streptomyces hygroscopicus subsp. hygroscopicus] Length = 319 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + +D + PE + N + + + + G+ ++ ST + R Sbjct: 66 DGVVHLAARSLIDDSVRRPERYWRGNTQQSLVLLDGMLAAGVGRIVFSSTAATYGQPERV 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E +PT P N YG SKLA + +A Y + Sbjct: 126 PIPEDAPTRPTNPYGASKLAVDVALADYARAH 157 >gi|294055511|ref|YP_003549169.1| NAD-dependent epimerase/dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293614844|gb|ADE54999.1| NAD-dependent epimerase/dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 320 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 19/146 (13%) Query: 1 MKCLVIGNNGQIAQSLSS-----MCVQDVE-IIRVGRPDI----DLLKPKDFASFFLSFS 50 MK ++G +G + L S VQ+++ V DI D+ +PK F+ F Sbjct: 1 MKICIVGGSGFVGTRLISNLKLDHAVQNLDKAASVTHADISEIADVREPKTFSGKFKGMD 60 Query: 51 PDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 V++ A + +D + + +N +G I D+ G+ + ++ G++ Sbjct: 61 AVVLL------AAEHRDDVTPTSLYYDVNVQGMKHILAEMDASGVKTMVFTSSVAIYGMN 114 Query: 109 R-TPIDEFSPTNPLNIYGKSKLAGEE 133 + +P +E S P N YGKSK EE Sbjct: 115 QASPPEESSSVAPFNHYGKSKWEAEE 140 >gi|253565820|ref|ZP_04843275.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251946099|gb|EES86506.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 298 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 12/184 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDIDLLKPKDFASFFLSFSPDVIINP 57 M L G +G + +L S+ +I VG R + + D + + DV+++ Sbjct: 1 MNLLFTGASGFLGSNLYSLLKDKYQIRTVGLTSRDNYTINLVSDVPKLNIKY--DVVLHA 58 Query: 58 AAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDE 114 A ++ K +E ++ F +N +G + A ++ GIP I+IST V+ S I E Sbjct: 59 AGKAHSIPKTGEEKQLFFDVNLQGTKNLCTALENSGIPKAFIFISTVAVYGCDSGENITE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P N Y SK+ E+ + A + ILR + + L +M+R + + Sbjct: 119 EHPLNGTTPYALSKIKAEKYLEGWCAMHNVKLSILRPSLIAGPNPPGNLGAMIRGIRNGK 178 Query: 171 EISV 174 +S+ Sbjct: 179 YLSI 182 >gi|218690100|ref|YP_002398312.1| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli ED1a] gi|218427664|emb|CAR08573.2| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli ED1a] Length = 331 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|148259628|ref|YP_001233755.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] gi|146401309|gb|ABQ29836.1| dTDP-glucose 4,6-dehydratase [Acidiphilium cryptum JF-5] Length = 356 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 12/104 (11%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD----SIGIPC------IYIST 100 PD++++ AA + VD++ D P N G + +AA ++ P +IST Sbjct: 79 PDIVMHLAAESHVDRSIDGPRDFIDTNITGTFVLLEAARAWFATLDEPARRRFRFHHIST 138 Query: 101 DYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D VF L + P E +P +P + Y SK A + V ++ + Y Sbjct: 139 DEVFGALEQGDPPFTETTPYDPRSPYAASKAASDHLVRAWRHTY 182 >gi|7239105|gb|AAC72282.2| oxidoreductase Rmd [Pseudomonas aeruginosa PAO1] Length = 313 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+P + PD +I+ A T V +A +P IN G + +A + G Sbjct: 48 DLLEPDSLGDLWPEL-PDAVIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 106 Query: 95 C--IYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 +YIS+ V+ ++ PI E +P N Y SKLA E Sbjct: 107 GTFLYISSGDVYGQVAEAALPIHEELIPHPRNPYAVSKLAAE 148 >gi|54025750|ref|YP_119992.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] gi|54017258|dbj|BAD58628.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] Length = 326 Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 15/146 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ + PE + N + +A G ++ ST V+ + Sbjct: 66 DGVLHFAAQSLVGESVERPEKYWHGNVVKTLELLEAMRHTGTGRLVFSSTAAVYGEPEQV 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS-- 161 PI E +PT P N YG +KLA + + SY + + T A Y G N ++ Sbjct: 126 PITEDAPTRPTNPYGATKLAIDHAITSYAIAHGLAATSLRYFNVAGAYGGLGENRVVETH 185 Query: 162 ----MLRLAKERRE-ISVVCDQFGTP 182 +L++A RE ISV + TP Sbjct: 186 LIPLVLQVALGHRESISVYGTDWPTP 211 >gi|301050011|ref|ZP_07196926.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 185-1] gi|300298235|gb|EFJ54620.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 185-1] gi|323187814|gb|EFZ73112.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli RN587/1] Length = 331 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|22538061|ref|NP_688912.1| UDP-glucose 4-epimerase [Streptococcus agalactiae 2603V/R] gi|25011949|ref|NP_736344.1| UDP-glucose 4-epimerase [Streptococcus agalactiae NEM316] gi|76799241|ref|ZP_00781414.1| UDP-glucose 4-epimerase [Streptococcus agalactiae 18RS21] gi|77412192|ref|ZP_00788513.1| UDP-glucose 4-epimerase [Streptococcus agalactiae CJB111] gi|22534965|gb|AAN00785.1|AE014278_12 UDP-glucose 4-epimerase [Streptococcus agalactiae 2603V/R] gi|24413491|emb|CAD47569.1| Unknown [Streptococcus agalactiae NEM316] gi|76585410|gb|EAO61995.1| UDP-glucose 4-epimerase [Streptococcus agalactiae 18RS21] gi|77161769|gb|EAO72759.1| UDP-glucose 4-epimerase [Streptococcus agalactiae CJB111] gi|319745899|gb|EFV98186.1| UDP-glucose 4-epimerase [Streptococcus agalactiae ATCC 13813] Length = 331 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L K F +PDV +I+ AA++ V ++ + P F N G + + + I Sbjct: 53 LSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E +P NP+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEQVPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKE-RREISVVCDQFGTP 182 +++ G ++ L +L++A+ R +I + D + TP Sbjct: 170 YFNVAGDKPDGSIGEDHKPETHLLPIILQVAQGVRDKIMIFGDDYNTP 217 >gi|320185809|gb|EFW60563.1| UDP-glucose 4-epimerase [Shigella flexneri CDC 796-83] Length = 331 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|223998907|ref|XP_002289126.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974334|gb|EED92663.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 331 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVII+ AA ++ E E A+ IN KA P +Y+STD V++G ++ Sbjct: 117 DVIIHLAALSSPFYCESHAEEAWKINCPVELLSLKA------PIMYMSTDQVYEG-TKQF 169 Query: 112 IDEFSPTNPLNIYGKSKLAGE 132 E T P+N+YG++KLA E Sbjct: 170 YGENDETVPVNMYGRTKLAFE 190 >gi|15888939|ref|NP_354620.1| NAD dependent epimerase/dehydratase family protein [Agrobacterium tumefaciens str. C58] gi|15156716|gb|AAK87405.1| NAD dependent epimerase/dehydratase family protein [Agrobacterium tumefaciens str. C58] Length = 296 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 20/161 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK-PKDFASFFL---SFS-PDVII 55 M+ ++ G++G++ +++ S ++ + R DFA L +F D +I Sbjct: 1 MRIVLTGSSGRVGRAIFSALAGRHDVTGIDRSPFSTTHIVDDFADESLLRRAFERADAVI 60 Query: 56 NPAAYTA-----VDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL-- 107 + AA A V AE + IN +GA +A+AA + G+P ++ ST ++ Sbjct: 61 HTAALHAPHVGCVPNAEFQ-----RINVDGARMVAEAAMATGVPRLVFTSTTALYGHAVS 115 Query: 108 --SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 S T IDE +P P +IY ++KL E + ++ +R Sbjct: 116 SGSCTFIDEDTPPQPKSIYHRTKLEAEHLLEEMAGPHLAVR 156 >gi|158312644|ref|YP_001505152.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158108049|gb|ABW10246.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 342 Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P++ + +N +G+ +AK A G+ +Y+S+ V+ + + + E SP NP Y + K Sbjct: 85 PDVTYKVNHQGSVRLAKLAKQAGVQRFVYMSSCSVYGVATGSDVTETSPVNPQTPYAECK 144 Query: 129 LAGEEKVASYTNNY---VILRTAWVYS----IFGSNFLLSMLRLAKERREISVVCDQFGT 181 + E VA ++ LR A Y + L ++ +A EI++ D GT Sbjct: 145 VYVERDVAPLADDTFSPTFLRNATAYGASPRMRFDIVLNNLAGVAWTTNEIAMTSD--GT 202 Query: 182 P----TSALQIARAI 192 P L IA+AI Sbjct: 203 PWRPLVHGLDIAKAI 217 >gi|310643492|ref|YP_003948250.1| udp-glucose 4-epimerase, gale [Paenibacillus polymyxa SC2] gi|309248442|gb|ADO58009.1| UDP-glucose 4-epimerase, galE [Paenibacillus polymyxa SC2] Length = 329 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL + + F + D +I+ AA + V ++ P + N G ++ +A G+ Sbjct: 50 DLRDKELLSKLFSENNIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMKDAGVS 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--- 146 ++ ST + + PI+E T P N+YG++KL E ++ + YV LR Sbjct: 110 KIVFSSTAATYGEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYVSLRYFN 169 Query: 147 --TAWVYSIFG------SNFLLSMLRLA-KERREISVVCDQFGTP 182 A G S+ + +L+ A K+R I+V + + TP Sbjct: 170 AAGAHESGKIGEDHRPESHLIPLVLQTALKQRPHIAVFGEDYATP 214 >gi|310827640|ref|YP_003959997.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] gi|308739374|gb|ADO37034.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] Length = 330 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYV 103 FL D +++ A + V ++ ++P + N G + ++ + I I+ ST Sbjct: 61 LFLRHEVDCVMHFCANSLVGESMEKPIEYYDNNVYGTLCLLRSMVNNDIKHFIFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + R PIDE +P +P N YG++KLA E+ + +Y +Y + R Sbjct: 121 YGEPERLPIDEDTPKHPTNTYGETKLAVEKMLHWMEVAYGLHYKVFR 167 >gi|159037932|ref|YP_001537185.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] gi|157916767|gb|ABV98194.1| dTDP-glucose 4,6-dehydratase [Salinispora arenicola CNS-205] Length = 357 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA + VD++ D NA G ++ +AA ++G+P +++STD V+ + Sbjct: 81 DAILHFAAESHVDRSVDGGATFVRTNALGTQSVLEAAVAVGVPRVVHVSTDEVYGSIEHG 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 E P P + Y SK + + SY Sbjct: 141 AWTETWPLLPNSPYAASKASADLIARSY 168 >gi|258543053|ref|YP_003188486.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256634131|dbj|BAI00107.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-01] gi|256637191|dbj|BAI03160.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-03] gi|256640243|dbj|BAI06205.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-07] gi|256643300|dbj|BAI09255.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-22] gi|256646355|dbj|BAI12303.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-26] gi|256649408|dbj|BAI15349.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-32] gi|256652394|dbj|BAI18328.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655452|dbj|BAI21379.1| 3-beta-hydroxy-delta(5)-steroid dehydrogenase [Acetobacter pasteurianus IFO 3283-12] Length = 317 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 18/102 (17%) Query: 52 DVIIN-PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 DV+IN A T+V + + ++N EGAG +A+ A +P +++ + G S T Sbjct: 74 DVVINLVAVLTSVKQQTLQ-----AVNVEGAGRVARIAAEANVP-VFVQMSAL--GASET 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 + E YGKS+ AGE+ V Y + VI+R + ++ Sbjct: 126 ALSE---------YGKSRAAGEKIVRQYRPDAVIIRPSVIFG 158 >gi|189347265|ref|YP_001943794.1| UDP-glucose 4-epimerase [Chlorobium limicola DSM 245] gi|189341412|gb|ACD90815.1| UDP-glucose 4-epimerase [Chlorobium limicola DSM 245] Length = 330 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+++P+ A +S D ++ AA A ++ PE N G I AA ++ + Sbjct: 51 DIMRPEQLAGV-MSAGFDGCVHLAALKAAGQSMLYPEQYAQANLVGTINILNAAVAVSLN 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 I+ S+ VF PIDE P P N YG +KL E +A Y Sbjct: 110 ALIFSSSAAVFGNPVYLPIDEEHPKEPENFYGFTKLEIERLLAWY 154 >gi|170769796|ref|ZP_02904249.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia albertii TW07627] gi|170121410|gb|EDS90341.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia albertii TW07627] Length = 331 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|168183753|ref|ZP_02618417.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|237795514|ref|YP_002863066.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|182673138|gb|EDT85099.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|229260862|gb|ACQ51895.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 307 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P ++N G I + + +Y S+ V+ PIDE Sbjct: 76 IDVQKSITNPIFDSNVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPEYLPIDEKHGIR 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRVFSNLNNLDFTILRYANVYGI 173 >gi|170743902|ref|YP_001772557.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] gi|168198176|gb|ACA20123.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] Length = 350 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IG 92 D+ +P+ A+ F F P+ +++ AA + VD++ P N G + +AA + G Sbjct: 58 DICEPERVAALFAEFRPEAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHHAG 117 Query: 93 IPC--------IYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +++STD V+ L E S +P + Y SK A + ++ Y Sbjct: 118 LPADGQARFRFLHVSTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETY 176 >gi|153954706|ref|YP_001395471.1| nucleoside-diphosphate-sugar epimerase [Clostridium kluyveri DSM 555] gi|219855173|ref|YP_002472295.1| hypothetical protein CKR_1830 [Clostridium kluyveri NBRC 12016] gi|146347564|gb|EDK34100.1| Predicted nucleoside-diphosphate-sugar epimerase [Clostridium kluyveri DSM 555] gi|219568897|dbj|BAH06881.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 335 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 26/129 (20%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------------------DSI 91 D+I + AA V + D+PE F + G I + A + Sbjct: 72 DIIYHLAASINVQDSIDDPETTFFNDTLGTFNILEKARYQMFGKRGRMDGNSWVLDPNED 131 Query: 92 GIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 PC +++ST V+D I E P P++ YG SK+A E V SY N Y V++ Sbjct: 132 TYPCKIVFMSTCMVYDVSKDEGISETHPVKPVSPYGGSKIAAENMVLSYYNAYKLPAVVI 191 Query: 146 RTAWVYSIF 154 R Y F Sbjct: 192 RPFNTYGSF 200 >gi|15604200|ref|NP_220715.1| hypothetical protein RP332 [Rickettsia prowazekii str. Madrid E] gi|3860892|emb|CAA14792.1| unknown [Rickettsia prowazekii] gi|292571939|gb|ADE29854.1| dTDP-4-dehydrorhamnose reductase [Rickettsia prowazekii Rp22] Length = 284 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-----------------IDLLKPKD 41 MK L++G G + S+ QD + R + +D+ Sbjct: 1 MKILILGVTGMLGNSMFRFLTQDSKFNVCATARSNAASLYFSKDLTNKLITNVDVENHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +PDV+IN ++P A IN+ +A IG I+ISTD Sbjct: 61 LVEVLNKTNPDVVINCIGLVKQLADVNDPLKALPINSLLPHRLANLCGLIGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G R E + ++YG+SK GE Sbjct: 121 CVFSG-KRGNYKESDFPDCNDLYGRSKFLGE 150 >gi|300896475|ref|ZP_07115001.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 198-1] gi|300359656|gb|EFJ75526.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 198-1] Length = 331 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|256842328|ref|ZP_05547832.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256736212|gb|EEU49542.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 636 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 27/149 (18%) Query: 21 VQDVEIIRVGR-PDI-------DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 + DV ++ R PDI D+ + F PD + + AAY V ED PE Sbjct: 333 LHDVRLMMARRWPDIESYTVVSDICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEE 392 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + N +G IA A G + +STD NP N+ G SK Sbjct: 393 SVRNNVDGTRVIADLAVKYGTRKFVMVSTD--------------KAVNPTNVMGCSKRIC 438 Query: 132 EEKVASY----TNNYVILRTAWVYSIFGS 156 E V S + V RT +V + FG+ Sbjct: 439 EIYVQSLDQAIKDGKVRGRTQFVTTRFGN 467 >gi|229823335|ref|ZP_04449404.1| hypothetical protein GCWU000282_00633 [Catonella morbi ATCC 51271] gi|229787110|gb|EEP23224.1| hypothetical protein GCWU000282_00633 [Catonella morbi ATCC 51271] Length = 627 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 15/97 (15%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + P ++ + AA+ V E P+ A N G +AKA D G+P + ISTD Sbjct: 374 FQDYQPAIVYHAAAHKHVPMMERNPKEALKNNIHGTYNVAKAVDQAGVPKMVMISTD--- 430 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP N+ G +K E V + Sbjct: 431 -----------KAVNPPNVMGATKRVAELIVTGFNKT 456 >gi|229819694|ref|YP_002881220.1| UDP-glucose 4-epimerase [Beutenbergia cavernae DSM 12333] gi|229565607|gb|ACQ79458.1| UDP-glucose 4-epimerase [Beutenbergia cavernae DSM 12333] Length = 318 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 27/209 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ------------DVEIIRVGRPDIDLL---KPKDFASF 45 M+ +V+G G I ++ + + + RV ++ LL D A Sbjct: 1 MRVVVVGGAGYIGAHVTRLLLDRGDDVVVVDNLSTGDAARVEGAELHLLTVTSGDDAALA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + D +++ AA +V+++ +P + N G + A G+ + S+ Sbjct: 61 EVLGGSDAVVHFAARKSVEESVHDPVAYYRDNVVGVTTVLAAMRDAGVGGLVFSSSAAVY 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGS-------- 156 G + + E + P+N YG+SK+ GE V+ Y I + Y ++ G+ Sbjct: 121 GEASGVVSESADLRPINPYGRSKVVGEWAVSDAAAAYRIRALSLRYFNVAGAADPSLRDH 180 Query: 157 ---NFLLSMLRLAKERREISVVCDQFGTP 182 N + + A++ R +SV D + TP Sbjct: 181 GARNLVPIAVEHARQGRPVSVFGDGYDTP 209 >gi|120401241|ref|YP_951070.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii PYR-1] gi|119954059|gb|ABM11064.1| NAD-dependent epimerase/dehydratase [Mycobacterium vanbaalenii PYR-1] Length = 342 Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 32/176 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--------- 51 MK LV G+ G + + V +++ D+ L F L +P Sbjct: 1 MKVLVTGHQGYLGTVM-------VPVLQAAGHDVTGLDSGLFEQCVLGPAPLDPPGIEQD 53 Query: 52 ------------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 D +++ AA + PEI ++IN G+ +A+ A G+ +Y Sbjct: 54 LRDVSVTQLAGFDAVVHLAALSNDPLGALAPEITYAINHRGSVRLARLAKEAGVRRFLYA 113 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVY 151 ST V+ ++E + PL Y +SK+ E+ VA+ +++ V LR A + Sbjct: 114 STCSVYGAADDGLVNEDTALRPLTPYAESKVRVEDDVAAIADDWFSPVFLRNATAF 169 >gi|291525901|emb|CBK91488.1| dTDP-glucose 4,6-dehydratase [Eubacterium rectale DSM 17629] Length = 339 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + P++ N G + A GI + +STD Sbjct: 68 KLFEEEHPDIVVNFAAESHVDRSIENPQVFLDTNIIGTSVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK A + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFHEDTPIHTSSPYSSSKAAADLLVLAYHRTY 171 >gi|167580865|ref|ZP_02373739.1| epimerase/dehydratase [Burkholderia thailandensis TXDOH] Length = 330 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 28/187 (14%) Query: 49 FSPDVIINPAAYTAV--DKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYIST-DYV 103 DV+++ AA V D+ D P+ AF N +A+AA G +++S+ + Sbjct: 63 LQADVVVHLAARVHVMRDRVLD-PDTAFRTSNVAATLRVARAARQQGARRFVFLSSIKAI 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFL 159 + P+ E S P + YG+SKL E + + + VI+R VY Sbjct: 122 AEADGGAPLREDSIPAPQDAYGRSKLEAERALEQLRDGASFDTVIIRPPLVYGPEVRANF 181 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAII-------QIAHNLIENSDTSLRGIFH 212 LS++R V P A++ R+++ + H IE + +++G FH Sbjct: 182 LSLMR---------AVAQGVPLPLGAVRARRSMVYVDNLADAVMHCAIEPA--AMQGCFH 230 Query: 213 MTADGGP 219 + DG P Sbjct: 231 VADDGAP 237 >gi|77414245|ref|ZP_00790406.1| UDP-glucose 4-epimerase [Streptococcus agalactiae 515] gi|77159697|gb|EAO70847.1| UDP-glucose 4-epimerase [Streptococcus agalactiae 515] Length = 331 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 25/168 (14%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L K F +PDV +I+ AA++ V ++ + P F N G + + + I Sbjct: 53 LSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 I S+ G+ + PI E +P NP+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEQVPILETAPQNPINPYGESKLMMETIMKWADQAYGIKFVALR--- 169 Query: 150 VYSIFG--------------SNFLLSMLRLAKE-RREISVVCDQFGTP 182 +++ G ++ L +L++A+ R +I + D + TP Sbjct: 170 YFNVAGDKPDGSIGEDHKPETHLLPIILQVAQGVRDKIMIFGDDYNTP 217 >gi|15802522|ref|NP_288548.1| putative UDP-galactose 4-epimerase [Escherichia coli O157:H7 EDL933] gi|15832101|ref|NP_310874.1| UDP-galactose 4-epimerase [Escherichia coli O157:H7 str. Sakai] gi|168750449|ref|ZP_02775471.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4113] gi|168757586|ref|ZP_02782593.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4401] gi|168761784|ref|ZP_02786791.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4501] gi|168769795|ref|ZP_02794802.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4486] gi|168775509|ref|ZP_02800516.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4196] gi|168782326|ref|ZP_02807333.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4076] gi|168788711|ref|ZP_02813718.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC869] gi|168799076|ref|ZP_02824083.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC508] gi|170019631|ref|YP_001724585.1| NAD-dependent epimerase/dehydratase [Escherichia coli ATCC 8739] gi|170683772|ref|YP_001743099.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli SMS-3-5] gi|188492182|ref|ZP_02999452.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 53638] gi|195938235|ref|ZP_03083617.1| NAD-dependent epimerase/dehydratase [Escherichia coli O157:H7 str. EC4024] gi|208817187|ref|ZP_03258279.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4045] gi|208819781|ref|ZP_03260101.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4042] gi|209398311|ref|YP_002271284.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4115] gi|215487265|ref|YP_002329696.1| putative UDP-galactose 4-epimerase [Escherichia coli O127:H6 str. E2348/69] gi|217329508|ref|ZP_03445587.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. TW14588] gi|218554610|ref|YP_002387523.1| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli IAI1] gi|218695665|ref|YP_002403332.1| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli 55989] gi|254793826|ref|YP_003078663.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. TW14359] gi|261225112|ref|ZP_05939393.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. FRIK2000] gi|261257543|ref|ZP_05950076.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. FRIK966] gi|291283282|ref|YP_003500100.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O55:H7 str. CB9615] gi|293446397|ref|ZP_06662819.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli B088] gi|300816667|ref|ZP_07096888.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 107-1] gi|300821852|ref|ZP_07101997.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 119-7] gi|300920282|ref|ZP_07136727.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 115-1] gi|301021287|ref|ZP_07185318.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 69-1] gi|312967274|ref|ZP_07781490.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 2362-75] gi|331683726|ref|ZP_08384322.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli H299] gi|33301137|sp|Q8X7P7|GNE_ECO57 RecName: Full=UDP-N-acetylglucosamine 4-epimerase; AltName: Full=UDP-GlcNAc 4-epimerase gi|12516233|gb|AAG57102.1|AE005430_2 putative UDP-galactose 4-epimerase [Escherichia coli O157:H7 str. EDL933] gi|18266396|gb|AAL67550.1|AF461121_1 UDP-GlcNAc 4-epimerase Gne [Escherichia coli] gi|13362315|dbj|BAB36270.1| putative UDP-galactose 4-epimerase [Escherichia coli O157:H7 str. Sakai] gi|37528721|gb|AAO37706.1| UDP-GlcNAc C4-epimerase [Escherichia coli] gi|168986308|dbj|BAG11848.1| putative UDP-galactose 4-epimerase [Escherichia coli O55:H7] gi|168986367|dbj|BAG11906.1| putative UDP-galactose 4-epimerase [Escherichia coli O55:H7] gi|168986424|dbj|BAG11962.1| putative UDP-galactose 4-epimerase [Escherichia coli O55:H6] gi|169754559|gb|ACA77258.1| NAD-dependent epimerase/dehydratase [Escherichia coli ATCC 8739] gi|170521490|gb|ACB19668.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli SMS-3-5] gi|187768958|gb|EDU32802.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4196] gi|188015355|gb|EDU53477.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4113] gi|188487381|gb|EDU62484.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 53638] gi|189000146|gb|EDU69132.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4076] gi|189355501|gb|EDU73920.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4401] gi|189361270|gb|EDU79689.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4486] gi|189367804|gb|EDU86220.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4501] gi|189371550|gb|EDU89966.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC869] gi|189378385|gb|EDU96801.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC508] gi|208730806|gb|EDZ79496.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4045] gi|208739904|gb|EDZ87586.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4042] gi|209159711|gb|ACI37144.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. EC4115] gi|215265337|emb|CAS09732.1| putative UDP-galactose 4-epimerase [Escherichia coli O127:H6 str. E2348/69] gi|217317276|gb|EEC25705.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. TW14588] gi|218352397|emb|CAU98171.1| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli 55989] gi|218361378|emb|CAQ98965.1| UDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase) [Escherichia coli IAI1] gi|254593226|gb|ACT72587.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. TW14359] gi|290763155|gb|ADD57116.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O55:H7 str. CB9615] gi|291323227|gb|EFE62655.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli B088] gi|300398213|gb|EFJ81751.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 69-1] gi|300412703|gb|EFJ96013.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 115-1] gi|300525694|gb|EFK46763.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 119-7] gi|300530897|gb|EFK51959.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 107-1] gi|312288082|gb|EFR15986.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 2362-75] gi|320191792|gb|EFW66440.1| UDP-glucose 4-epimerase [Escherichia coli O157:H7 str. EC1212] gi|320641390|gb|EFX10839.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. G5101] gi|320646760|gb|EFX15641.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H- str. 493-89] gi|320652039|gb|EFX20386.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H- str. H 2687] gi|320657463|gb|EFX25261.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663279|gb|EFX30584.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O55:H7 str. USDA 5905] gi|320668116|gb|EFX34991.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli O157:H7 str. LSU-61] gi|323936937|gb|EGB33220.1| NAD dependent epimerase/dehydratase [Escherichia coli E1520] gi|325497861|gb|EGC95720.1| putative UDP-galactose 4-epimerase [Escherichia fergusonii ECD227] gi|326338398|gb|EGD62226.1| UDP-glucose 4-epimerase [Escherichia coli O157:H7 str. 1044] gi|326347079|gb|EGD70812.1| UDP-glucose 4-epimerase [Escherichia coli O157:H7 str. 1125] gi|331078678|gb|EGI49880.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli H299] gi|332092419|gb|EGI97492.1| UDP-N-acetylglucosamine 4-epimerase [Shigella boydii 5216-82] Length = 331 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|320450036|ref|YP_004202132.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] gi|320150205|gb|ADW21583.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] Length = 310 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 22/177 (12%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEI-----IRVGRPD----------IDLLKPKDFAS 44 M+ LV G G I ++ S+ + VE+ + GR + +DL + Sbjct: 1 MRVLVTGGAGFIGSHIAESLVREGVEVAVLDNLSTGRRENVPKGIYFYKVDLRDKESLER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P + + AA +V + D P + F +N G+ + +A G ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVDNPTLDFEVNLLGSLNLLEAMRKWGAEKMVFASTGGA 120 Query: 104 FDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 G +E P P + Y SK + E +++Y NY + WV +G+ + Sbjct: 121 IYGEVPEGERAEETWPPKPKSPYAASKASFEHYLSAYGQNYGL---KWVSLRYGNVY 174 >gi|260576535|ref|ZP_05844524.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] gi|259021258|gb|EEW24565.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] Length = 346 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 9/108 (8%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPC 95 + F PD +++ AA + VD++ D P S N G + +AA + G Sbjct: 66 AVFARHRPDAVMHLAAESHVDRSIDGPGDFISTNITGTYTLLEAARAFWTAAGRPAGFRF 125 Query: 96 IYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L T E +P P + Y SK A + V +++ Y Sbjct: 126 HHISTDEVFGTLGPTGQFTEDTPYAPNSPYAASKAASDHLVRAWSETY 173 >gi|260579327|ref|ZP_05847209.1| dTDP-glucose 4,6-dehydratase [Corynebacterium jeikeium ATCC 43734] gi|258602456|gb|EEW15751.1| dTDP-glucose 4,6-dehydratase [Corynebacterium jeikeium ATCC 43734] Length = 366 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 I++ AA + D + P I N EG +A+AA +G+ +ISTD VF L+ Sbjct: 99 AIVHFAAESHNDNSLATPAIFARSNVEGTLNVAQAAADLGVRLHHISTDEVFGDLALDDP 158 Query: 113 DEF---SPTNPLNIYGKSKLAGEEKVASY 138 + F +P NP + Y SK A + V ++ Sbjct: 159 NRFTVDTPYNPSSPYSASKAAADHFVRAF 187 >gi|110668875|ref|YP_658686.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626622|emb|CAJ53088.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 329 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 40/87 (45%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D++++ AA + VD E ++A+ +N G +A G + + V P Sbjct: 75 DIVLHLAAVSGVDDCETNADLAYEVNVTGTTNVAWFCRKTGAALAFPFSMAVLGDPESFP 134 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASY 138 I +P+N YG++KL GE V + Sbjct: 135 ISVDDGRDPMNWYGRTKLIGERLVEEF 161 >gi|227529528|ref|ZP_03959577.1| UDP-galactose 4-epimerase [Lactobacillus vaginalis ATCC 49540] gi|227350613|gb|EEJ40904.1| UDP-galactose 4-epimerase [Lactobacillus vaginalis ATCC 49540] Length = 331 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 23/151 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 + +++ AA++ V ++ +P F N G + +A I I S+ G+ Sbjct: 68 EAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMRDHNIKYIVFSSTAATYGVPEHM 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG----------- 155 PI E P NP+N YG SKL E+ + +Y +V LR +++ G Sbjct: 128 PIKETDPQNPINPYGLSKLMMEKMMHWADKAYGIKFVALR---YFNVAGAAPDGTIGEDH 184 Query: 156 ---SNFLLSMLRLAK-ERREISVVCDQFGTP 182 ++ + +L++A+ +R+E+S+ D + TP Sbjct: 185 GPETHLVPIILQVAQGKRKELSIFGDDYNTP 215 >gi|506333|dbj|BAA05020.1| HrEpiB [Halocynthia roretzi] Length = 241 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA +PE+A ++N G I K G +Y ST + ++ Sbjct: 92 DAIVHLAAIVGYPACSKDPELAKNVNVTGTKNITKNLKQ-GQRLVYASTGSCYGAVTGM- 149 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 E +P +PL +YG +K GE+ V V LR A V+ I Sbjct: 150 CTEDTPISPLTLYGSTKADGEKLVRDVGG--VGLRLATVFGI 189 >gi|163845658|ref|YP_001633702.1| UDP-glucose 4-epimerase [Chloroflexus aurantiacus J-10-fl] gi|222523363|ref|YP_002567833.1| UDP-glucose 4-epimerase [Chloroflexus sp. Y-400-fl] gi|163666947|gb|ABY33313.1| UDP-glucose 4-epimerase [Chloroflexus aurantiacus J-10-fl] gi|222447242|gb|ACM51508.1| UDP-glucose 4-epimerase [Chloroflexus sp. Y-400-fl] Length = 327 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 30/153 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------------------DLLK 38 M+ LV G G I S+ E+IR G I DL Sbjct: 1 MRILVTGGAGYIGSITSA------ELIRAGHEVIVIDNLYQGHRAAVPPEATFIQADLAN 54 Query: 39 PKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 ++ + F ++ D I++ A+YT V ++ ++P + N AG + + A + G+ I Sbjct: 55 RQELSEIFAAYPGIDGIMHFASYTLVGESMEKPMLYLRDNVTNAGNLLEVAIAAGVRRFI 114 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 ST +FD R PI E P + YG+SK Sbjct: 115 LSSTANLFDQPERIPIAEHERIVPGSPYGESKF 147 >gi|15678659|ref|NP_275774.1| UDP-glucose 4-epimerase [Methanothermobacter thermautotrophicus str. Delta H] gi|2621713|gb|AAB85137.1| UDP-glucose 4-epimerase [Methanothermobacter thermautotrophicus str. Delta H] Length = 325 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + D +++ AA+T V ++ +P + N + + G+ I+ ST V+ Sbjct: 60 FETHDVDAVMHFAAFTDVGESVLKPGRYYHNNVVNTINLLDSMVDHGVRDFIFSSTCAVY 119 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 PI E P NP++ YG+SKL EE + Y + NYV LR Sbjct: 120 GNPMEIPISEEHPLNPISPYGRSKLMVEEILGDYRDAYGLNYVSLR 165 >gi|88810773|ref|ZP_01126030.1| hypothetical protein NB231_16873 [Nitrococcus mobilis Nb-231] gi|88792403|gb|EAR23513.1| hypothetical protein NB231_16873 [Nitrococcus mobilis Nb-231] Length = 285 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 4/135 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+L A +PD++IN K P INA +A+ Sbjct: 53 IDVLDQDALAEAQSHANPDLVINCVGLIKQRKEAKNPLRVLPINAMLPHRLARLCALTDA 112 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I++STD VF G S E ++ ++YGKSK GE + + + LRT+ + Sbjct: 113 RLIHVSTDCVFSGGS-GRYAEADRSDAEDLYGKSKFIGELHDSPHA---ITLRTSIIGHE 168 Query: 154 FGSNFLLSMLRLAKE 168 SN L L++E Sbjct: 169 LSSNHALVDWFLSQE 183 >gi|330448351|ref|ZP_08311999.1| UDP-glucose 4-epimerase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492542|dbj|GAA06496.1| UDP-glucose 4-epimerase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 339 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 30/163 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI---------------IRVGR-PDIDLLKP----- 39 M+ LV G G I S CVQ +E +GR ++ +KP Sbjct: 1 MRVLVTGGMGYIG---SHTCVQMIEAGMTPIIVDNLYNSKETVLGRIENLTGVKPAFYKG 57 Query: 40 --KDFA---SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 +D A S F D +I+ A AV ++ ++P + N G + +A + G+ Sbjct: 58 DIRDRAFLDSVFAENEIDAVIHFAGLKAVGESVEKPLEYYDNNVHGTLVLVEAMRAAGVN 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 I+ S+ V+ + PI E PT+ N YG+SKL EE +A Sbjct: 118 ALIFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLA 160 >gi|288870331|ref|ZP_06409716.1| putative epimerase/dehydratase WbiI [Clostridium hathewayi DSM 13479] gi|288867578|gb|EFC99876.1| putative epimerase/dehydratase WbiI [Clostridium hathewayi DSM 13479] Length = 622 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 101/263 (38%), Gaps = 58/263 (22%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAY 60 N +I Q L C P++DL+ S F ++ PDV+ + AA+ Sbjct: 327 NAYEIQQELKRNC-----------PELDLVTLIGSVRNTNRLNSVFETYRPDVVYHAAAH 375 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V ED P A N G A+AA G + ISTD N Sbjct: 376 KHVPLMEDSPNEAIKNNVIGTYKTARAAMKYGTKHFVLISTD--------------KAVN 421 Query: 120 PLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P NI G SK E + + + +V +R ++ GSN S++ L K++ E Sbjct: 422 PTNIMGASKRLCEMVIQMCNSKSSTEFVAVRFG---NVLGSNG--SVIPLFKKQIE---- 472 Query: 176 CDQFGTPTSAL--QIARAIIQI--AHNLIENSDTSLRG--IFHMTADGGPVSWADFAEYI 229 G P + I R + I A +L+ + +G IF + G PV D AE + Sbjct: 473 ---NGGPVTVTDPDIIRYFMTIPEAVSLVLQAGAYAKGGEIFVLNM-GEPVKILDMAENL 528 Query: 230 FWESAERGGPYSKVYRIFTKQYP 252 S PY + +FT P Sbjct: 529 IRLSGYE--PYKDIDIVFTGLRP 549 >gi|238750660|ref|ZP_04612159.1| dTDP-glucose 4,6-dehydratase [Yersinia rohdei ATCC 43380] gi|238711050|gb|EEQ03269.1| dTDP-glucose 4,6-dehydratase [Yersinia rohdei ATCC 43380] Length = 339 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 42 VDICSRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQ 101 Query: 94 PC----------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 102 PLSAEAKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 161 Query: 142 Y 142 Y Sbjct: 162 Y 162 >gi|323489096|ref|ZP_08094330.1| dTDP-4-dehydrorhamnose reductase [Planococcus donghaensis MPA1U2] gi|323397219|gb|EGA90031.1| dTDP-4-dehydrorhamnose reductase [Planococcus donghaensis MPA1U2] Length = 338 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 4/113 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + + F I++ AA + VD++ EPEI N G + +AA I Sbjct: 59 IDIADRQAIDALFEKIDFTYIVHFAAESHVDRSIAEPEIFIRTNVLGTQVLLEAAKRANI 118 Query: 94 -PCIYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L P F +P P + Y SK + + V +Y Y Sbjct: 119 KKFVHVSTDEVYGELEFDPTTFFTEETPLQPSSPYSASKASSDLLVRAYYETY 171 >gi|253578779|ref|ZP_04856050.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849722|gb|EES77681.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 339 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ ++P I N G + A GI + +STD Sbjct: 68 KLFEEEHPDIVVNFAAESHVDRSIEDPGIFLQTNIIGTSVLMDACRKYGIQRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK A + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAAADLLVLAYHRTY 171 >gi|296126695|ref|YP_003633947.1| UDP-glucose 4-epimerase [Brachyspira murdochii DSM 12563] gi|296018511|gb|ADG71748.1| UDP-glucose 4-epimerase [Brachyspira murdochii DSM 12563] Length = 330 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 20/124 (16%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP------EIAFSINAEGAGAIAK 86 D DLL F S D +++ AY V ++ P ++ SIN A AK Sbjct: 54 DSDLLD-----KIFKSHDIDSVMHLCAYIEVGESVQNPAKYYQNNVSNSINLLNAMLKAK 108 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NY 142 + I+ ST V+ + P++E S P N YG SKLA E+ ++ YT NY Sbjct: 109 VKN-----FIFSSTAAVYGEPEKIPLEEDSRKEPTNPYGDSKLALEKILSWYTKAYDFNY 163 Query: 143 VILR 146 V LR Sbjct: 164 VALR 167 >gi|254486776|ref|ZP_05099981.1| UDP-glucose 4-epimerase [Roseobacter sp. GAI101] gi|214043645|gb|EEB84283.1| UDP-glucose 4-epimerase [Roseobacter sp. GAI101] Length = 327 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 +LL + F + P +++ AA + V + +P + + N EG+ + +AA G + Sbjct: 51 NLLNRDQIDAAFAQYQPVAVMHFAALSQVGDSMTQPGLYWRNNVEGSLNLIEAAAEAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + +DE S +P+N YG SK A E+ Sbjct: 111 NFVFSSTCATYGDQDNVVLDENSAQHPINAYGASKRAIED 150 >gi|33602695|ref|NP_890255.1| hypothetical protein BB3720 [Bordetella bronchiseptica RB50] gi|33577137|emb|CAE35694.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 294 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 +++S+ V+ +DE +P PL G+S L E + ++ V+LR A +Y G Sbjct: 104 LFVSSSAVYGEHDGQWVDEHTPPGPLGFNGRSLLEAERSLGAWPGQAVVLRLAGLYGP-G 162 Query: 156 SNFLLSMLRLAKER 169 LL LR + R Sbjct: 163 RLQLLERLRAGQAR 176 >gi|308049731|ref|YP_003913297.1| short-chain dehydrogenase/reductase SDR [Ferrimonas balearica DSM 9799] gi|307631921|gb|ADN76223.1| short-chain dehydrogenase/reductase SDR [Ferrimonas balearica DSM 9799] Length = 201 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 5/67 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----PDIDLLKPKDFASFFLSFSP-DVII 55 MK L+IG +G I Q+++ D E+IRVG +DL +P + F P D II Sbjct: 1 MKVLLIGASGTIGQAVTDALSSDCEVIRVGHRSGDHQVDLSQPDQLRALFADVGPVDAII 60 Query: 56 NPAAYTA 62 + A + Sbjct: 61 STAGQAS 67 >gi|302547825|ref|ZP_07300167.1| LigA protein [Streptomyces hygroscopicus ATCC 53653] gi|302465443|gb|EFL28536.1| LigA protein [Streptomyces himastatinicus ATCC 53653] Length = 317 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 8/115 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SR 109 D++++ AA A E ++N EGA + +AA G P +++S+ V+D R Sbjct: 63 DLVVHCAAAVGDPMAGSAAEAEMRAVNVEGAARLLRAAG--GRPVVWVSSASVYDPRPGR 120 Query: 110 TPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 + E P + LN YG++K AGE + V+LR VY G +L+ L Sbjct: 121 GRVGEDHPVSGQLNAYGRTKAAGER--LALEAGAVVLRPRAVYGA-GDPYLVPRL 172 >gi|271963039|ref|YP_003337235.1| UDP-galactose 4-epimerase [Streptosporangium roseum DSM 43021] gi|270506214|gb|ACZ84492.1| UDP-galactose 4-epimerase [Streptosporangium roseum DSM 43021] Length = 293 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 21/159 (13%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRV----GRPDI-------DLLKPKDFASFFLSF 49 + LV G+ G+ +S+ +++ E+I V G P + DL + F Sbjct: 3 RTLVTGSAGRFGRSVVTALAEAGHEVIGVDTAPGTPSVAAAVLPADLTDLGEAFGVMSRF 62 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-- 107 PD +++ AA D F +N + A + + A +G+ I I++ G Sbjct: 63 RPDAVVHLAAIATPFSRTDS--FTFRVNTQLAFNVCETATGVGVERIVIASSPTVIGYGT 120 Query: 108 -----SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 S PIDE P P N Y SKL E+ + ++ Sbjct: 121 AGWTPSYLPIDEDHPVAPWNAYSLSKLVAEQVMGTFARG 159 >gi|48477613|ref|YP_023319.1| UDP-glucose 4-epimerase [Picrophilus torridus DSM 9790] gi|48430261|gb|AAT43126.1| UDP-glucose 4-epimerase [Picrophilus torridus DSM 9790] Length = 309 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 31/251 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFA-------SFFLSF 49 K L+ G G I ++ V D ++ + D D L K+F + + Sbjct: 5 KILITGGAGFIGSNMVERLVNDNDVTVIDFTDNIKYIKDFLHNKNFHFINNDLLKYEIKD 64 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLS 108 D+II+ AA + V ++P + F+ N + + + I+ S+ V+ S Sbjct: 65 KFDIIIHLAANSDVRSGSNDPMLDFNENVVLTQNLLEYMRRYDVNEMIFSSSSTVYGEAS 124 Query: 109 RTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLS----- 161 P E + P P++ YG SKLA E +++Y++ Y I + + ++ + G N Sbjct: 125 IMPTPESYGPCMPISSYGASKLANEAFISAYSHYYGIKASMFRFANVVGKNSTHGVIHDF 184 Query: 162 MLRLAKERREISVVCDQFGTP-TSALQIARAI--IQIAHNLIENSDTSLRGIFHMTADGG 218 +++L E+ ++ D GT S + ++ I + + H I+ +D G + G Sbjct: 185 IMKLKNNPNELEILGD--GTQRKSYIHVSDCINAMLLIHERIQKTDVINLG------NHG 236 Query: 219 PVSWADFAEYI 229 S A+Y+ Sbjct: 237 TTSVKTIADYV 247 >gi|187733487|ref|YP_001879836.1| UDP-N-acetylglucosamine 4-epimerase [Shigella boydii CDC 3083-94] gi|187430479|gb|ACD09753.1| UDP-N-acetylglucosamine 4-epimerase [Shigella boydii CDC 3083-94] Length = 331 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|254467979|ref|ZP_05081385.1| UDP-glucose 4-epimerase [beta proteobacterium KB13] gi|207086789|gb|EDZ64072.1| UDP-glucose 4-epimerase [beta proteobacterium KB13] Length = 329 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 70/144 (48%), Gaps = 7/144 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII--RVGRP----DIDLLKPKDFASFFLSFSPDVI 54 +K L+ G++ + +LS+ ++++ I ++ +P + +L F F+ D + Sbjct: 18 VKTLIHGHDVVVVDNLSNSNLKNIHNIQSKISKPFHFIEDTILNDGAMDEIFNEFNFDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPID 113 ++ A ++ ++ + E F N +G+ + A + I+ S+ V+ ++R+PI Sbjct: 78 LHFAGLKSITESFAKKEHYFENNVQGSNILRVLAKKYNVNKFIFSSSANVYGTVNRSPIK 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVAS 137 E NP + YGK+K E + S Sbjct: 138 ETDNLNPESPYGKTKQHFENDLIS 161 >gi|162451720|ref|YP_001614087.1| hypothetical protein sce3447 [Sorangium cellulosum 'So ce 56'] gi|161162302|emb|CAN93607.1| galE1 [Sorangium cellulosum 'So ce 56'] Length = 338 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D I+ A AV ++ ++P + N G + KA D+ G ++ S+ V+ R Sbjct: 77 DATIHFAGLKAVGESVEKPLSYYENNVAGTVCLLKALDARGARKLVFSSSATVYGDPERV 136 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 P+DE S P N YG+SK E+ Sbjct: 137 PLDEGSRLGPTNPYGQSKFMVEQ 159 >gi|212550167|gb|ACJ26817.1| dTDP-4-dehydrorhamnose reductase (L-QuiNAc synthase) [Salmonella enterica subsp. arizonae] Length = 291 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 24/178 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS------------- 48 K L+IG NG + SL + E +G D K K F F + Sbjct: 4 KILIIGANGMLGSSLLRFYSKLSEYDVLGTVRNDEAKLKVFKQGFTNIISNVELSNLDII 63 Query: 49 ------FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F PD + N A + ++ S+N+ +A+ + I+ STD Sbjct: 64 NKIIADFHPDYVFNCVGIIKQLNAAKDYLVSISVNSLLPHQLAQICSRHNVKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 VF G+ + + P + ++YGKSK GE ++ LRT+ + SN L Sbjct: 124 VFSGIHGSYCETDVP-DASDLYGKSKQLGEIDYGG----HLTLRTSIIGHELSSNHSL 176 >gi|163797707|ref|ZP_02191655.1| nucleoside-diphosphate-sugar epimerase [alpha proteobacterium BAL199] gi|159177055|gb|EDP61618.1| nucleoside-diphosphate-sugar epimerase [alpha proteobacterium BAL199] Length = 332 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 2/138 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYT 61 C + G L ++ ++R G +I D+ S F PD +++ AA Sbjct: 18 CKALACTGHEPVVLDNLSQGHRSLVRWGPLEIGDIADASCLDSVFRRHRPDAVMHFAAVA 77 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD-YVFDGLSRTPIDEFSPTNP 120 +V ++ P + + N G + A G+P + S+ ++ PI E P Sbjct: 78 SVGESVGNPGLYYRNNVGGTLNLLDAMRRNGVPTLVFSSSCAIYGSPDAGPIREDQSPKP 137 Query: 121 LNIYGKSKLAGEEKVASY 138 +N YG SKL E ++ + Sbjct: 138 VNPYGASKLMAERILSDF 155 >gi|124486241|ref|YP_001030857.1| hypothetical protein Mlab_1424 [Methanocorpusculum labreanum Z] gi|124363782|gb|ABN07590.1| CDP-glucose 4,6-dehydratase [Methanocorpusculum labreanum Z] Length = 361 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 7/113 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + S PD I + AA V K+ P F N G+ + A S+G P Sbjct: 65 DIRDQSTLTKYIQSVQPDCIFHLAAQPLVRKSYANPVDTFDTNVMGSIYLMDAVRSLGKP 124 Query: 95 C--IYISTDYVFDGLSRTPIDEFSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 C + I++D ++ + + + + T+P+ + Y SK E VASY ++ Sbjct: 125 CSVVMITSDKCYENVGKA--EGYVETDPMGGHDPYSASKGCAELAVASYRRSF 175 >gi|77165802|ref|YP_344327.1| UDP-glucose 4-epimerase [Nitrosococcus oceani ATCC 19707] gi|254434861|ref|ZP_05048369.1| UDP-glucose 4-epimerase [Nitrosococcus oceani AFC27] gi|76884116|gb|ABA58797.1| UDP-galactose 4-epimerase [Nitrosococcus oceani ATCC 19707] gi|207091194|gb|EDZ68465.1| UDP-glucose 4-epimerase [Nitrosococcus oceani AFC27] Length = 338 Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + +S D +++ AAYT V ++ +P ++ N + + + G+ S+ Sbjct: 62 TLLKEYSVDTVMHFAAYTIVPESVADPLKYYANNTCHTHNLLECCAAAGVKHFIFSSTAA 121 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 G+ TP + E +PT P+N YG SKL E + + NYV LR Sbjct: 122 TYGIPSTPLVTEDTPTIPVNPYGTSKLMSEWMLRDLSQASSLNYVTLR 169 >gi|329667673|gb|AEB93621.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ AAY+ V ++ +P + N G ++ +A D + + S+ G+ +T Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAMDDAKVKYLVFSSSAATYGIPKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 PI E +P +P+N YG++K+ EK+ + +N Sbjct: 128 PITEDTPLDPINPYGETKMM-MEKIMHWADN 157 >gi|328947796|ref|YP_004365133.1| UDP-glucose 4-epimerase [Treponema succinifaciens DSM 2489] gi|328448120|gb|AEB13836.1| UDP-glucose 4-epimerase [Treponema succinifaciens DSM 2489] Length = 326 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 28/160 (17%) Query: 1 MKCLVIGNNGQIA-----------------QSLSSMCVQDV----EIIRVGRPDIDLLKP 39 MK LVIG G I +LSS +Q++ E I D+L P Sbjct: 1 MKVLVIGGAGYIGSHVVKELMAKNHEVTVFDNLSSGLIQNLFKKNEFIAG-----DILHP 55 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 +D F + D I+ AA+ A ++ PE N G I AA + + ++ Sbjct: 56 EDLDKAF-ARGFDAFIHLAAFKAAGESMIFPEKYSINNINGTLNILNAAVAHNCLNMVFS 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 S+ F PIDE P NP N YG +KL EE + Y Sbjct: 115 SSAATFGEPQYLPIDENHPKNPENYYGFTKLKIEEFMGWY 154 >gi|251779542|ref|ZP_04822462.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083857|gb|EES49747.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 339 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+I+N AA + VD++ + PEI N G + A GI Sbjct: 58 IDIADREAVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIMGTAVLMDACMKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L PID F+ P++ Sbjct: 118 KRYHQVSTDEVYGDL---PIDRPDLFFTEETPIH 148 >gi|161502749|ref|YP_001569861.1| hypothetical protein SARI_00799 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864096|gb|ABX20719.1| hypothetical protein SARI_00799 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 291 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 24/178 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS------------- 48 K L+IG NG + SL + E +G D K K F F + Sbjct: 4 KILIIGANGMLGSSLLRFYSKLSEYDVLGTVRNDEAKLKVFKQGFTNIISNVELSNLDII 63 Query: 49 ------FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F PD + N A + ++ S+N+ +A+ + I+ STD Sbjct: 64 NKIIADFHPDYVFNCVGIIKQLNAAKDYLVSISVNSLLPHQLAQICSRHNVKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 VF G+ + + P + ++YGKSK GE ++ LRT+ + SN L Sbjct: 124 VFSGIHGSYCETDVP-DASDLYGKSKQLGEIDYGG----HLTLRTSIIGHELSSNHSL 176 >gi|161527676|ref|YP_001581502.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338977|gb|ABX12064.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 308 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++I+ AA + ++ + P+ IN EG+ + +A + I S+ V+ + Sbjct: 69 DLVIHLAAKIDILQSIEHPDQTHKINVEGSLNLLRACVKNNVKNFIAASSAAVYGNPKQI 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSN 157 P+ EF+ NP++ YG K+A E + ++ N Y I LR VY + SN Sbjct: 129 PVTEFTIPNPVSPYGADKIALEFYLRAFCNAYGINGIALRFFNVYGLGQSN 179 >gi|294675382|ref|YP_003575998.1| NAD-binding domain 4 protein [Prevotella ruminicola 23] gi|294472034|gb|ADE81423.1| NAD-binding domain 4 protein [Prevotella ruminicola 23] Length = 331 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 13/109 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL- 107 D +++ A T +D F IN EG + A +G+P +++S+ +F + Sbjct: 68 DYVVHAAGVTKCLDKQD----FFRINTEGTKNLVDALVEVGMPLKRLVFVSSLSIFGAIR 123 Query: 108 SRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNN--YVILRTAWVY 151 + P E T+ P YG+SKLA E+ + + Y+I+R VY Sbjct: 124 EQQPYQEIKETDTPQPNTAYGRSKLAAEQYLEQMASRVPYIIVRPTGVY 172 >gi|261880225|ref|ZP_06006652.1| NAD-dependent epimerase/dehydratase [Prevotella bergensis DSM 17361] gi|270333058|gb|EFA43844.1| NAD-dependent epimerase/dehydratase [Prevotella bergensis DSM 17361] Length = 311 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 3/117 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D++ + AA + + K +P++ +++ + + Sbjct: 56 DLLNMESMHKIFSKGKFDMVYHLAANSDIQKGGSDPQVDYALTFNTTFNVLMLMKEFQVK 115 Query: 95 CIYIS-TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 ++ S T +F +EF P P++ YG KLA E +++++N Y I W+ Sbjct: 116 KLFFSSTSAIFGEAIGKLNEEFGPLRPVSNYGAGKLASEAFISAFSNTYNI--KTWI 170 >gi|237751163|ref|ZP_04581643.1| UDP-glucose 4-epimerase [Helicobacter bilis ATCC 43879] gi|229373608|gb|EEO23999.1| UDP-glucose 4-epimerase [Helicobacter bilis ATCC 43879] Length = 374 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL S F ++ +++ AA+ V ++ +P + N + + ++ + Sbjct: 100 DLSDKATLDSIFSTYQIQAVMHFAAFAYVGESVKDPSKYYYNNIANSLNLLESMRKANVK 159 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I+ ST + PI E P NP+N YG SKL E + +++ NYVILR Sbjct: 160 NIIFSSTCATYGHPLHLPITESHPQNPINPYGYSKLVVENMLKDFSHAYGINYVILR 216 >gi|168183156|ref|ZP_02617820.1| UDP-glucose 4-epimerase [Clostridium botulinum Bf] gi|237796215|ref|YP_002863767.1| UDP-glucose 4-epimerase [Clostridium botulinum Ba4 str. 657] gi|182673724|gb|EDT85685.1| UDP-glucose 4-epimerase [Clostridium botulinum Bf] gi|229262749|gb|ACQ53782.1| UDP-glucose 4-epimerase [Clostridium botulinum Ba4 str. 657] Length = 326 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVYGTLSLLETMKEHNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|94264687|ref|ZP_01288468.1| UDP-glucose 4-epimerase [delta proteobacterium MLMS-1] gi|93454853|gb|EAT05100.1| UDP-glucose 4-epimerase [delta proteobacterium MLMS-1] Length = 346 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P+ A F +I+ A AV ++ +P + N G + +A + G+ Sbjct: 58 DINDPELLAELFARHQISAVIHFAGLKAVGESVAQPLAYYHTNVGGTVNLCRAMAAAGVF 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEE 133 ++ S+ V+ + P+ E PT P N YG+SKL EE Sbjct: 118 RLVFSSSATVYGEQQQMPLTEDCPTGKPTNPYGRSKLMIEE 158 >gi|123440570|ref|YP_001004564.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087531|emb|CAL10312.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 355 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 58 VDICDRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQ 117 Query: 94 PC----------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 PLDAKKKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|41410323|ref|NP_963159.1| RmlB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118466831|ref|YP_883541.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium 104] gi|254776838|ref|ZP_05218354.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium subsp. avium ATCC 25291] gi|41399157|gb|AAS06775.1| RmlB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118168118|gb|ABK69015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium avium 104] Length = 331 Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA + VD A PE N G I +A G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALAGPEPFLHTNVVGTFTILEAVRRHGVRLHHISTDEVYGDLELDD 131 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + F +P NP + Y +K A + V ++ +Y + T Sbjct: 132 PNRFTESTPYNPSSPYSATKAAADMLVRAWVRSYGVRAT 170 >gi|261403713|ref|YP_003247937.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] gi|261370706|gb|ACX73455.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius M7] Length = 304 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD--YVFDGLSR 109 +V+I+ AA V + + P +N G I + I I ++ V+ + Sbjct: 66 EVVIHQAAQINVRNSVENPVYDADVNILGTINILEMMRKYDINKIIFASSGGAVYGEPNY 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYS 152 P+DE P NPL+ YG SK GEE + Y Y ILR + VY Sbjct: 126 LPVDENHPINPLSPYGLSKYVGEEYIQLYNRLYGTEYAILRYSNVYG 172 >gi|189345976|ref|YP_001942505.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] gi|189340123|gb|ACD89526.1| NAD-dependent epimerase/dehydratase [Chlorobium limicola DSM 245] Length = 333 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 20/158 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE----IIRVGRPDIDLLKP----------KDFASFF 46 MK LV G +G I L+ C Q+ ++R G I L+ +D A+ Sbjct: 1 MKVLVTGASGFIGSHLAGRCGQEGHQVRALVRKGNAAIPRLQEQGITVIEGDIRDAAAVH 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--DSIGIPCIYISTDYVF 104 + II AA A D E P+ IN G +A+AA + +G +Y+S+ VF Sbjct: 61 RAAEGCDIIVHAAAVASDWGE--PQDFIDINIGGTRNVAEAALRNRVG-RLVYLSSIEVF 117 Query: 105 DGLSRTPIDEFSPTNPLNI-YGKSKLAGEEKVASYTNN 141 D + IDE +P + N Y +K+A + Y Sbjct: 118 DHVKSERIDEQTPFHQRNQPYPDTKIAATRLIGEYAEK 155 >gi|170746490|ref|YP_001752750.1| UDP-glucose 4-epimerase [Methylobacterium radiotolerans JCM 2831] gi|170653012|gb|ACB22067.1| UDP-glucose 4-epimerase [Methylobacterium radiotolerans JCM 2831] Length = 330 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L D + + AA V + +P + N ++ +AA G+ I+ ST V+ Sbjct: 63 ILQHRIDALAHFAAKIVVPDSVADPLGYYLANTVKTRSLIEAAVRAGVKHVIFSSTAAVY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 TP+ E P NP+N YG+SKL E + A++ +YV+LR Sbjct: 123 GEPDVTPVPEDLPLNPINPYGRSKLMSEWMIADAAAAHGFSYVVLR 168 >gi|114571302|ref|YP_757982.1| UDP-galactose 4-epimerase [Maricaulis maris MCS10] gi|114341764|gb|ABI67044.1| UDP-galactose 4-epimerase [Maricaulis maris MCS10] Length = 330 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F ++P +++ AA T V++ E P + N G A+ +A G ++ ST + Sbjct: 61 FGDYTPVAVMHFAANTEVEEGEQAPLAFWDNNVGGVIALLQAMRRAGCDRLVFSSTCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILR 146 + + P+ E P+N+YG++KLA E +A + Y LR Sbjct: 121 GMIEQFPLTEDRLQLPVNVYGRTKLAVEHMLADVSRTEGLRYAALR 166 >gi|33593391|ref|NP_881035.1| hypothetical protein BP2404 [Bordetella pertussis Tohama I] gi|33572747|emb|CAE42675.1| conserved hypothetical protein [Bordetella pertussis Tohama I] gi|332382800|gb|AEE67647.1| hypothetical protein BPTD_2361 [Bordetella pertussis CS] Length = 294 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P A PD + Y A D P I +G + A D+ + Sbjct: 49 DLTQPATLAGL-----PDGLTQ-VVYLPAPGAHD-PARYREIFVDGLRHLRDALDTAALR 101 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +++S+ V+ +DE +P PL G+S L E + ++ V+LR A +Y Sbjct: 102 RTLFVSSSAVYGEHDGQWVDEHTPPGPLGFNGRSLLEAERSLDAWPGQAVVLRLAGLYGP 161 Query: 154 FGSNFLLSMLRLAKER 169 G LL LR + R Sbjct: 162 -GRLQLLERLRAGQAR 176 >gi|295400932|ref|ZP_06810907.1| dTDP-glucose 4,6-dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|294976934|gb|EFG52537.1| dTDP-glucose 4,6-dehydratase [Geobacillus thermoglucosidasius C56-YS93] Length = 340 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ +P I N +G + AA G+ I ISTD V+ L T Sbjct: 75 DAVVNFAAESHVDRSIVDPGIFVKTNVQGTQVLLDAAKKYGVKKYIQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V +Y Y Sbjct: 135 GYFTETTPLAPNSPYSASKACADLLVRAYHETY 167 >gi|254419668|ref|ZP_05033392.1| UDP-glucose 4-epimerase [Brevundimonas sp. BAL3] gi|196185845|gb|EDX80821.1| UDP-glucose 4-epimerase [Brevundimonas sp. BAL3] Length = 336 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 4/102 (3%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 +I+ A V ++ +P + IN G A+ A G+ I S+ G +D Sbjct: 67 VIHFAGLIEVGRSSADPAPFWDINVNGVAAVLWAMRETGVRRIVFSSTAAVYGQPAGAVD 126 Query: 114 E----FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 E +PT P+N YG KLA E +A++ Y + A Y Sbjct: 127 ERLSESAPTLPINPYGDGKLAAELMIAAHARAYGLEGVALRY 168 >gi|54401435|gb|AAV34516.1| UDP-GlcNAc 4-epimerase [Salmonella enterica subsp. salamae serovar Greenside] Length = 331 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 31/62 (50%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNGVKNIIFTSSVAVYGLNKKNPDETHPHDPFNHYGKSKWQA 139 Query: 132 EE 133 EE Sbjct: 140 EE 141 >gi|260887356|ref|ZP_05898619.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|330838668|ref|YP_004413248.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|260862894|gb|EEX77394.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|329746432|gb|AEB99788.1| dTDP-glucose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] Length = 335 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 + F + PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 ALFRAEQPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSVLMDACREYGISRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ PL+ Sbjct: 128 VYGDL---PLDRPDLFFTEETPLH 148 >gi|194337308|ref|YP_002019102.1| UDP-glucose 4-epimerase [Pelodictyon phaeoclathratiforme BU-1] gi|194309785|gb|ACF44485.1| UDP-glucose 4-epimerase [Pelodictyon phaeoclathratiforme BU-1] Length = 325 Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 2/105 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+++P+ + ++ D ++ AA A ++ PE N G I A G+ Sbjct: 51 DIMRPEQLRAV-MAEGFDGCVHLAALKAAGQSMLNPEAYAEANIAGTINILNQASEAGLS 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P I+ S+ V+ PIDE P P N YG +KL E + Y Sbjct: 110 PIIFSSSAAVYGSPQYLPIDEVHPKEPENFYGFTKLEIERLLGWY 154 >gi|312866097|ref|ZP_07726318.1| UDP-glucose 4-epimerase [Streptococcus downei F0415] gi|311098501|gb|EFQ56724.1| UDP-glucose 4-epimerase [Streptococcus downei F0415] Length = 333 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 36/222 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG----------RPDIDL----LKPKDFAS 44 M LV+G G I + VQ E++ V P L + F Sbjct: 1 MAILVLGGAGYIGSHMVDYLVQKGQEEVVVVDSLVTGHRAAVHPAAKFYQGDLADQTFMR 60 Query: 45 FFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S +PD+ +I+ AA++ V ++ ++P F N G + + + I I S+ Sbjct: 61 QVFSENPDLDAVIHFAAFSLVAESMEKPLKYFDNNTAGMIKLLEVMNEFNIKHIVFSSTA 120 Query: 103 VFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL-L 160 G+ PI E +P P+N YG+SKL E I++ W +G F+ L Sbjct: 121 ATYGIPEEIPIKETTPQKPINPYGESKLMME----------TIMK--WSDQAYGIKFVSL 168 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 +A + + S+ D G T L I I+Q+A + E Sbjct: 169 RYFNVAGAKPDGSIGEDH-GPETHLLPI---ILQVAQGVREK 206 >gi|221069655|ref|ZP_03545760.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni KF-1] gi|220714678|gb|EED70046.1| NAD-dependent epimerase/dehydratase [Comamonas testosteroni KF-1] Length = 336 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 3/126 (2%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DL + + A F +P +++ AA V + D+P+ N G G + + Sbjct: 60 ELDLAERQGMADLFAKVAPGKVLHLAAQAGVRYSIDQPDDYTDSNLLGFGNVLQGCRKHQ 119 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW- 149 I +Y S+ V+ G ++ P E + P++ Y +K A E SY + Y I T Sbjct: 120 IEHLVYASSSSVYGGNTKMPFAESDAVDHPISYYAATKKANELMAHSYAHLYGIPTTGLR 179 Query: 150 VYSIFG 155 ++++G Sbjct: 180 FFTVYG 185 >gi|86355730|ref|YP_467622.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] gi|86279832|gb|ABC88895.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] Length = 327 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 FSPD +I+ A V ++ + P + N G+ + +A I I S+ G+ Sbjct: 66 FSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLEACLDQEIDKIVFSSSCATYGVP 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E SP P+N YG++KL E + + Y I A Y Sbjct: 126 ASLPIREESPQQPVNPYGRTKLIFEMALEDFAAAYGICFAALRY 169 >gi|55379503|ref|YP_137353.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232228|gb|AAV47647.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 297 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 16/130 (12%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + + F PD +++ AA A ++ F N + AA G Sbjct: 51 VDVTEGVEVRDLFSEVDPDAVVHWAALPAPERHAGT--RVFDTNVSATYNVIDAAGRAGA 108 Query: 94 PCIYISTDYVFDGLS---------RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---- 140 ++ S++ + GL+ PIDE PT P + YG SK+AGEE T Sbjct: 109 DVVWASSESAY-GLAFAEETPLPAYLPIDESHPTAPEDPYGTSKVAGEEVAKMVTRRDGV 167 Query: 141 NYVILRTAWV 150 + +R +W+ Sbjct: 168 DVASIRPSWI 177 >gi|13540890|ref|NP_110578.1| UDP-glucose 4-epimerase [Thermoplasma volcanium GSS1] gi|14324272|dbj|BAB59200.1| NDP-sugar epimerase [Thermoplasma volcanium GSS1] Length = 312 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 17/158 (10%) Query: 32 PDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 P+ +K KD + + D++++ AA + V P + +N EG ++ + Sbjct: 50 PNFKFIK-KDILNGIDGYHYDIVVHLAADSDVRNGSSNPALDMKVNVEGTISVLEMMRKS 108 Query: 92 GIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VI 144 I I ++ G ++ TP + + P P++ YG SKLA E +++Y + Y ++ Sbjct: 109 DIKDILFASSSTVYGEAKVIPTP-ENYGPLLPISSYGASKLAAEAFISAYASYYGFNALL 167 Query: 145 LRTAWVYSIFGSNFLLSML-----RLAKERREISVVCD 177 R A ++ G N ++ +L ++E+ V+ D Sbjct: 168 FRFA---NVVGKNSTHGVIFDFINKLKNNKKELEVLGD 202 >gi|332286077|ref|YP_004417988.1| hypothetical protein PT7_2824 [Pusillimonas sp. T7-7] gi|330430030|gb|AEC21364.1| hypothetical protein PT7_2824 [Pusillimonas sp. T7-7] Length = 323 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 28/164 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII----RVGRPDI-----------DLLKPKDF 42 M+ LV+G++G I L + D EII R G PD D+L PK F Sbjct: 1 MRILVLGSSGFIGARLVRELARKLPDAEIIASDLRAGAPDTSLPGNIKFVVGDILDPKLF 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-----IY 97 ++ F D + + AA VD AE E IN A+ + D+ + ++ Sbjct: 61 SNLF-EHRIDAVFHLAAALTVD-AESSFERGMDINVH---ALIRLLDACRLQVDTPKFLF 115 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 S+ F G +D++ P YG K+ GE+ + Y+ Sbjct: 116 ASSVSTFGGELPETVDDYVRQTPQTSYGTHKVIGEQLINDYSRR 159 >gi|157151274|ref|YP_001450225.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] gi|157076068|gb|ABV10751.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] Length = 333 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 25/167 (14%) Query: 37 LKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 L KDF + P D +I+ AA++ V ++ +P F N G ++ + G+ Sbjct: 53 LADKDFMRDVFAKHPSIDAVIHFAAFSLVAESMVDPLKYFDNNTAGMVSLLEVMQECGVK 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAW 149 I S+ G+ PI E +P P+N YG+SKL E + +Y +V LR Sbjct: 113 NIVFSSTAATYGIPEEIPILETTPQKPINPYGESKLMMETIMHWADRAYGIKFVALR--- 169 Query: 150 VYSIFGSN-------------FLLSM-LRLAKERRE-ISVVCDQFGT 181 +++ G+ LLS+ L++A+ +R+ I+V D + T Sbjct: 170 YFNVAGAKPDGSIGEDHGPETHLLSIVLQVAQGKRDKIAVFGDDYDT 216 >gi|92116849|ref|YP_576578.1| UDP-glucose 4-epimerase [Nitrobacter hamburgensis X14] gi|91799743|gb|ABE62118.1| UDP-galactose 4-epimerase [Nitrobacter hamburgensis X14] Length = 336 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ R P+ E +PT PL+ YG SKL E + ++ NYV+LR Sbjct: 113 IFSSTAAVYGNPDRMPVPEDAPTRPLSPYGSSKLMSEIMLHDVATAHGLNYVVLR 167 >gi|194436098|ref|ZP_03068200.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 101-1] gi|301026311|ref|ZP_07189764.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 196-1] gi|194424826|gb|EDX40811.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli 101-1] gi|299879741|gb|EFI87952.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 196-1] gi|323972808|gb|EGB68007.1| NAD dependent epimerase/dehydratase [Escherichia coli TA007] Length = 331 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMERNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|227889617|ref|ZP_04007422.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|227849760|gb|EEJ59846.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] Length = 330 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 2/91 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ AAY+ V ++ +P + N G ++ +A D + + S+ G+ +T Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAMDDAKVKYLVFSSSAATYGIPKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 PI E +P +P+N YG++K+ EK+ + +N Sbjct: 128 PITEDTPLDPINPYGETKMM-MEKIMHWADN 157 >gi|91205525|ref|YP_537880.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii RML369-C] gi|91069069|gb|ABE04791.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii RML369-C] Length = 284 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ +D+++ R P++D+ Sbjct: 1 MKILILGATGMLGNSMVRFLSTDKDLDVYATSRSSSAHSYFSKDLANKIVPNVDVENYDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 P+++IN ++P A IN+ +A + +G I+ISTD Sbjct: 61 LVEVLNKIKPNIVINCIGLVKQLADANDPLKALPINSLLPHRLAGLCELVGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G + E + ++YG+SK GE Sbjct: 121 CVFSG-KKGNYKESDFPDCYDLYGRSKFLGE 150 >gi|89097009|ref|ZP_01169900.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] gi|89088389|gb|EAR67499.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] Length = 329 Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRVG----------RPDIDL----LKPKDF-AS 44 M LV+G G I + ++ + Q+ E + V PD ++ K+F S Sbjct: 1 MSILVLGGAGYIGSHAVYQLIDQNYEAVVVDSLETGHREAVHPDAKFYQGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F S D +++ AA + V ++ + P F+ N G + + + + I S+ Sbjct: 61 VFEKESIDGVLHFAANSLVGESMENPLKYFNNNVYGTQVLLEVMNEFDVKNIVFSSTAAT 120 Query: 105 DGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 G +T PI E NP N YG++KL E+ + A++ YV LR Sbjct: 121 YGEQKTMPITEEMSANPTNAYGETKLTMEKIMKWCEAAHDLKYVSLR 167 >gi|225012753|ref|ZP_03703188.1| UDP-glucose 4-epimerase [Flavobacteria bacterium MS024-2A] gi|225003286|gb|EEG41261.1| UDP-glucose 4-epimerase [Flavobacteria bacterium MS024-2A] Length = 339 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 25/161 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFAS-------FFLSFS-- 50 MK LV G G I ++ + +Q E+I V D LK D FF +F Sbjct: 1 MKILVTGGLGYIGSHVTVLLLQKGYEVISVDNLDNSSLKVLDGIESITGNRPFFEAFDVR 60 Query: 51 ------------PDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 P++ +I+ AA+ AV ++ + P + N G I K IP I Sbjct: 61 NEDQMSLLFDKFPEIDGVIHFAAHKAVGESVENPLKYYENNISGLVQILKPVIQKSIPFI 120 Query: 97 YISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVA 136 + S+ V+ + PID E S + YG +K GE+ +A Sbjct: 121 FSSSCTVYGQADQMPIDEEVSLKKAFSPYGNTKQIGEQIIA 161 >gi|307153797|ref|YP_003889181.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306984025|gb|ADN15906.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 342 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V VE+I+ D LL F +S +++ AAY V ++ P + + N G Sbjct: 49 VLQVELIQGDISDRALLD-----DLFKRYSIAAVMHFAAYIFVGESVTNPAMYYRNNVVG 103 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A + + I S+ G+ + P+ E P NP+N YG +KL E+ +A + Sbjct: 104 TLTLLEAMVAANVKKIVFSSTCATYGVPQFMPLTEDHPQNPINPYGHTKLMVEKILADFD 163 Query: 140 NNYVILRTAWVY 151 + Y + + Y Sbjct: 164 HAYGLKSVCFRY 175 >gi|170761307|ref|YP_001788095.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] gi|169408296|gb|ACA56707.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] Length = 326 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVYGTLSLLETMKEHNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLRWAEMAYNIKYVVLR 166 >gi|83594905|ref|YP_428657.1| UDP-glucuronate 5'-epimerase [Rhodospirillum rubrum ATCC 11170] gi|83577819|gb|ABC24370.1| UDP-glucuronate 5'-epimerase [Rhodospirillum rubrum ATCC 11170] Length = 335 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + F + P +I+ AA V + + P N G ++ + G+ Sbjct: 60 LDLADEAGVDAVFRAARPRRVIHLAAQAGVRYSVENPRAYLESNLMGTFSVLEGCRKTGV 119 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-V 150 ++ ST V+ P E P + PL Y +K A E SY N Y + TA Sbjct: 120 EHLVFASTSSVYGANKTQPFSEHQPADHPLTFYAATKRATEMMAHSYANIYQLPSTALRF 179 Query: 151 YSIFG 155 ++++G Sbjct: 180 FTVYG 184 >gi|325685366|gb|EGD27473.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 345 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDICDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF 115 + +STD V+ LS D F Sbjct: 118 KRYHQVSTDEVYGDLSLDRPDLF 140 >gi|222528109|ref|YP_002571991.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor bescii DSM 6725] gi|222454956|gb|ACM59218.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor bescii DSM 6725] Length = 318 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 2/110 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D++ F ++ D +IN AA + VD++ +P+I N G + + GI Sbjct: 59 DIVDRSKVEEVFKNYQIDYVINFAAESHVDRSIKDPDIFVKTNVLGTQVLLDVSRKFGIK 118 Query: 94 PCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I ISTD V+ L E SP P + Y SK + V +Y Y Sbjct: 119 KFIQISTDEVYGSLGPEGYFTEESPLAPNSPYSASKAGADMLVRAYFKTY 168 >gi|167765916|ref|ZP_02437969.1| hypothetical protein CLOSS21_00407 [Clostridium sp. SS2/1] gi|317498844|ref|ZP_07957130.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 5_1_63FAA] gi|167712414|gb|EDS22993.1| hypothetical protein CLOSS21_00407 [Clostridium sp. SS2/1] gi|291559814|emb|CBL38614.1| dTDP-glucose 4,6-dehydratase [butyrate-producing bacterium SSC/2] gi|316893872|gb|EFV16068.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae bacterium 5_1_63FAA] Length = 340 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 32/151 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG----RPDIDLLKP-------------- 39 MK LV G G I + V D EI+ + +++ LKP Sbjct: 1 MKILVTGGAGFIGGNFVHHMVNKYPDYEIVNLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 40 --KDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 ++F F D+++N AA + VD++ ++P I N EG + AA G+ Sbjct: 61 ADREFIMDLFEKEKFDIVVNFAAESHVDRSIEDPSIFVKTNVEGTVVLLDAAKKYGVKRY 120 Query: 97 Y-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ T PL+ Sbjct: 121 HQVSTDEVYGDL---PLDRPDLFFTETTPLH 148 >gi|153938971|ref|YP_001391393.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|152934867|gb|ABS40365.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. Langeland] gi|295319423|gb|ADF99800.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum F str. 230613] Length = 307 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P ++N G I + + +Y S+ V+ PIDE Sbjct: 76 IDVQKSITNPIFDSNVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPEYLPIDEGHGIR 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRVFSNLNNLDFTILRYANVYGI 173 >gi|56965580|ref|YP_177314.1| UDP-glucose 4-epimerase [Bacillus clausii KSM-K16] gi|56911826|dbj|BAD66353.1| UDP-glucose 4-epimerase [Bacillus clausii KSM-K16] Length = 338 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 ++++ +V DI+LL + F + + +I+ A AV ++ ++P + N Sbjct: 44 IEEITSKKVKTYDINLLDSSRLETVFAENNIEAVIHFAGLKAVGESVEKPLHYYETNIGS 103 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEE---KVA 136 + K + G+ + S+ GL + PI+E +P +N YG +K+ E+ +A Sbjct: 104 TIQLCKTMEKYGVYKLVFSSSATVYGLPEQVPIEENAPLKAVNPYGNTKIIIEDMLRDLA 163 Query: 137 SYTNNYVI 144 + NN+ I Sbjct: 164 TSNNNWRI 171 >gi|83955937|ref|ZP_00964448.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] gi|83839701|gb|EAP78879.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] Length = 345 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F + PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DICDREALDRIFTTHQPDAVMHLAAESHVDRSIDGPGAFIQTNVTGTYTLLEAARAYWQG 116 Query: 92 -----GIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD V+ L T E +P +P + Y SK A + V ++ Y Sbjct: 117 AGKPDGFRFHHISTDEVYGSLGPTGQFTEDTPYDPRSPYSASKAASDHLVRAWGETY 173 >gi|329963091|ref|ZP_08300871.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] gi|328529132|gb|EGF56062.1| NAD dependent epimerase/dehydratase family protein [Bacteroides fluxus YIT 12057] Length = 284 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P+VIIN + +++ P+ A INA + K AD + ++ISTD VF G + Sbjct: 61 QPEVIINCIG-VLIKGSKEHPDNAILINAYFPHLLKKLADEVDAKLVHISTDCVFSG-KK 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGE 132 E + ++YG+SK GE Sbjct: 119 GGYTEEDFRDADDVYGRSKALGE 141 >gi|119026525|ref|YP_910370.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium adolescentis ATCC 15703] gi|118766109|dbj|BAF40288.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 340 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + PE N EG + +A GI ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y I T Sbjct: 141 PAKFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIRAT 179 >gi|116254383|ref|YP_770221.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] gi|115259031|emb|CAK10141.1| putative UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. viciae 3841] Length = 327 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ P I++ AA Sbjct: 20 CLDLANKGYTPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKYIVEQALADY-DQYRSLRS 165 >gi|27753572|dbj|BAC55206.1| dTDP-glucose 4,6-dehydratase [Streptomyces sp. TP-A0274] Length = 334 Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D+++N AA + VD++ + + N G + +A G P +++STD V+ + Sbjct: 69 DLVVNFAAESHVDRSIADADEFVHSNVLGVQTLMRACLDAGTPRVVHVSTDEVYGSIDTG 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 DE +P NP + Y +K G+ Sbjct: 129 SWDETAPLNPNSPYAAAKAGGD 150 >gi|326803104|ref|YP_004320922.1| UDP-glucose 4-epimerase [Aerococcus urinae ACS-120-V-Col10a] gi|326650364|gb|AEA00547.1| UDP-glucose 4-epimerase [Aerococcus urinae ACS-120-V-Col10a] Length = 337 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%) Query: 24 VEIIRVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 +E I RP ++L F S D +I+ AA+ AV ++ ++P + N G Sbjct: 44 IEKIAGKRPTFYQANILDGNALRQIFEKESIDAVIHYAAFKAVGESVEKPIDYYHNNMGG 103 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + K G+ +Y S+ V+ + +P+ E PT+ N YG SK+ GE+ Sbjct: 104 LLQVLKVMKEFGVKEFVYSSSATVYGMNNVSPLTEDLPTSATNPYGYSKVMGEQ 157 >gi|238927347|ref|ZP_04659107.1| UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] gi|238884629|gb|EEQ48267.1| UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] Length = 329 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 + +I+ AA + V ++ ++P + F+ N G + +A GI ++ ST V+ R Sbjct: 68 EAVIHFAANSLVGESVEKPLLYFNNNVYGMQVLLEAMVRHGIDKIVFSSTAAVYGEPKRV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE--KVASYTNN--YVILR 146 PI E T+P N YG++KL E+ K S N YV LR Sbjct: 128 PIHEDDETHPTNPYGETKLTMEKMMKWVSRANGVRYVSLR 167 >gi|147676776|ref|YP_001210991.1| UDP-glucose 4-epimerase [Pelotomaculum thermopropionicum SI] gi|146272873|dbj|BAF58622.1| UDP-glucose 4-epimerase [Pelotomaculum thermopropionicum SI] Length = 328 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 VQ E++ D +LL+ F + + +++ AA + V ++ P + N Sbjct: 40 AVQGAELVAGDTADRELLR-----GLFRKYGIEAVMHFAASSLVGESVRRPSEYYYNNVV 94 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ A G+ I+ ST V+ PI E P NP N YG +KLA E + Y Sbjct: 95 KGLSLMDAMVEAGVRFLIFSSTAAVYGEPREVPITEAHPANPTNPYGATKLAVEGAMRWY 154 Query: 139 TNNY 142 Y Sbjct: 155 GEAY 158 >gi|304437349|ref|ZP_07397308.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369605|gb|EFM23271.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 329 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 + +I+ AA + V ++ ++P + F+ N G + +A GI ++ ST V+ R Sbjct: 68 EAVIHFAANSLVGESVEKPLLYFNNNVYGMQVLLEAMVRHGIDKIVFSSTAAVYGEPKRV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE--KVASYTNN--YVILR 146 PI E T+P N YG++KL E+ K S N YV LR Sbjct: 128 PIHEDDETHPTNPYGETKLTMEKMMKWVSRANGVRYVSLR 167 >gi|297531513|ref|YP_003672788.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] gi|297254765|gb|ADI28211.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] Length = 340 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL+ S F S + +I+ A AV ++ P + + N G + G+ Sbjct: 58 DLLERDALESVFAKHSIEAVIHFAGLKAVGESVAVPLLYYHNNITGTLVLLDVMRQYGVK 117 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEE 133 I S+ G+ R PI E P P N YG++K EE Sbjct: 118 NIVFSSSATVYGMPERVPIREDFPLRPTNPYGRTKWMIEE 157 >gi|289167213|ref|YP_003445480.1| UDP-galactose 4-epimerase [Streptococcus mitis B6] gi|288906778|emb|CBJ21612.1| UDP-galactose 4-epimerase [Streptococcus mitis B6] Length = 332 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKQLDVYDASALKTYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|225020237|ref|ZP_03709429.1| hypothetical protein CORMATOL_00240 [Corynebacterium matruchotii ATCC 33806] gi|224946981|gb|EEG28190.1| hypothetical protein CORMATOL_00240 [Corynebacterium matruchotii ATCC 33806] Length = 334 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 + DV+++ AA T VD + +P N G A+ +A YISTD VF L Sbjct: 68 TSDVVVHFAAETHVDASLRDPAAFVHSNVVGTFALLEAIRKYDTRLHYISTDEVFGDLEL 127 Query: 110 TP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 T E SP NP + Y +K + V ++ ++ I Sbjct: 128 TDPRRFTETSPYNPSSPYSATKAGADHLVRAWIRSFNI 165 >gi|220910181|ref|YP_002485492.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] gi|219866792|gb|ACL47131.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] Length = 329 Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 3/124 (2%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 V+DV +++ DI+ D F + +++ AAY V ++ P + N Sbjct: 42 LVEDVLQVKLIGGDINDRALLD--QIFAQHQIEAVMHFAAYAYVGESVTNPAKYYRNNVA 99 Query: 80 GAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + +A + G+ ++ ST + + PI E P NP+N YG SKL E + + Sbjct: 100 GTLTLLEAMVAAGVSKLVFSSTCATYGVPQQLPIPETHPQNPINPYGMSKLMVEAMLTDF 159 Query: 139 TNNY 142 + Y Sbjct: 160 DHAY 163 >gi|329963038|ref|ZP_08300818.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides fluxus YIT 12057] gi|328529079|gb|EGF56009.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides fluxus YIT 12057] Length = 340 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALVTGVKHVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|325969351|ref|YP_004245543.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323708554|gb|ADY02041.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 321 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 35/206 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIR------VGR-PDI---------DLLKPKD 41 M+ L+ G G I L+ V+ DV +I +GR D+ DL P D Sbjct: 1 MRVLITGGAGFIGSFLTEKLVESGFDVIVIDNLSSGDLGRLSDVIDRIRFVKDDLKNPSD 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 +F + D + + AA V + EP F N + + + GI +Y S+ Sbjct: 61 PEAFQ---NVDTVFHLAANPEVRISVTEPRTHFDENILVTFNVLELSRKYGIKNIVYASS 117 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS 156 V+ P E P P++IYG +K AGE +Y Y V LR A +I G Sbjct: 118 STVYGDARVIPTPEDHPIQPISIYGAAKAAGEVMCGTYARLYGMNCVALRYA---NIVGP 174 Query: 157 NFLLS-----MLRLAKERREISVVCD 177 +++L K E+ V+ D Sbjct: 175 RLRHGVIYDLLMKLRKNPEELEVLGD 200 >gi|302495919|ref|XP_003009973.1| UDP-glucose 4-epimerase [Arthroderma benhamiae CBS 112371] gi|291173495|gb|EFE29328.1| UDP-glucose 4-epimerase [Arthroderma benhamiae CBS 112371] Length = 380 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDRVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTNN 141 K+A E + N+ Sbjct: 160 KVAIESAITDMVNS 173 >gi|284163764|ref|YP_003402043.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284013419|gb|ADB59370.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 309 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 27/175 (15%) Query: 3 CLVIGNNGQIAQ-SLSSMCVQDVEIIRVG--RPD----------IDLLKPKDFASFFLSF 49 +V G G + + + + V+++ V RPD +DL + D Sbjct: 18 AIVTGATGDVGSWVVDRLADRGVDVVGVDFDRPDGVRANVDFRGVDLTEGVDTWETIAEV 77 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-- 107 PD +++ AA + D E+ F N A + +AA GI ++ S+ + L Sbjct: 78 DPDAVVHLAALS--DPLENPSTRLFENNVTSAYNVLQAAGREGIDVVWSSSQATYGALFA 135 Query: 108 ------SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYS 152 PIDE P + YG SK+ GEE S Y I +R A ++S Sbjct: 136 ESTWTPDYLPIDEAHDRRPEDAYGLSKVCGEEIAKSMARRYEISVATIRPATIFS 190 >gi|291298419|ref|YP_003509697.1| UDP-glucose 4-epimerase [Stackebrandtia nassauensis DSM 44728] gi|290567639|gb|ADD40604.1| UDP-glucose 4-epimerase [Stackebrandtia nassauensis DSM 44728] Length = 321 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 13/157 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDF---------ASFFLS 48 MK LV G G + +++M ++ +V ++ + D P A+ L Sbjct: 1 MKYLVTGGAGYVGSVVATMLLEAGHEVVVLDDLSTNGDTGIPAGATVVRGRIHEAAEVLD 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 S D +++ A Y A ++ +P+I + +N G ++ A + G+ ++ S+ V+ Sbjct: 61 DSFDGVLHFAGYIANGESMAKPDIYWDVNVVGTLSLLNAMHAAGVRSLVFSSSASVYGNP 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 S P E + T P + YG +KLA + + +Y + I Sbjct: 121 SELPATENAITRPTSTYGANKLAADYAITNYCTAFDI 157 >gi|284989030|ref|YP_003407584.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] gi|284062275|gb|ADB73213.1| UDP-glucose 4-epimerase [Geodermatophilus obscurus DSM 43160] Length = 325 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +++ AA V+++ + P + N EG + +AA G+ I+ S+ V+ + Sbjct: 69 VVHVAAKKQVEESVNRPLYYYRENVEGLRVLLEAATDAGVGSFIFSSSAAVYGSPDVDVV 128 Query: 113 DEFSPTNPLNIYGKSKLAGE---EKVASYTN-NYVILRTAWVYSIFG-----------SN 157 DE +P P+N YG +K GE E+V++ T YV LR +++ G SN Sbjct: 129 DEDTPCLPVNPYGTTKYVGERMVEEVSAATGLRYVNLR---YFNVAGAGTPELTDRGVSN 185 Query: 158 FLLSMLRLAKERREISVVCDQFGTP 182 + + + +R+ + D + TP Sbjct: 186 LVPMVFQRLAQRQAPRIFGDDYATP 210 >gi|122934726|gb|ABM68331.1| RmlB [Geobacillus tepidamans] Length = 339 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ +P + N +G + AA G+ I ISTD V+ L T Sbjct: 75 DAVVNFAAESHVDRSITDPGVFVRTNIQGTQVLLDAAKKYGVKKYIQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V +Y Y Sbjct: 135 GYFTETTPLAPNSPYSASKASADFLVRAYHETY 167 >gi|15903725|ref|NP_359275.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae R6] gi|116515575|ref|YP_817098.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae D39] gi|15459357|gb|AAL00486.1| UDP-galactose 4-epimerase, truncation [Streptococcus pneumoniae R6] gi|116076151|gb|ABJ53871.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae D39] Length = 233 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHYTGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P+ E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|126668406|ref|ZP_01739363.1| UDP-glucose 4-epimerase [Marinobacter sp. ELB17] gi|126627115|gb|EAZ97755.1| UDP-glucose 4-epimerase [Marinobacter sp. ELB17] Length = 329 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + F + +++ AA V ++ P ++ N + +A D IP Sbjct: 50 DLADAEAIDAVFSQHQFEAVLHFAANIVVPESVSNPLKYYANNTRNTLNLLQAVDRHQIP 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 ++ ST V+ +T + E P P+N YG SK+ E + A+ + NYVILR Sbjct: 110 YMVFSSTAAVYGTPEQTVLTEDLPLVPINPYGASKMMSERMIMDLAAASSLNYVILR--- 166 Query: 150 VYSIFGSN 157 +++ G+N Sbjct: 167 YFNVAGAN 174 >gi|116326942|ref|YP_796662.1| NDP-sugar dehydratase or epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332393|ref|YP_802111.1| NDP-sugar dehydratase or epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116119686|gb|ABJ77729.1| NDP-sugar dehydratase or epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116126082|gb|ABJ77353.1| NDP-sugar dehydratase or epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 322 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 16/177 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G +G + L V++ +I +GR F S F+ + D+ +P ++ Sbjct: 11 VLVTGGSGSLGLVLLPELVKNYRVICIGRKLSSFPDSIRFHSNFVFYEVDLENDPE-FSI 69 Query: 63 VDKAEDEPEIAFSINAEGAGA--------------IAKAADSIGIPCIYISTDYVFDGLS 108 +K E +A ++ + + + A+ S ++ S+ V+ G S Sbjct: 70 NEKPEFIIHLAGKVSGQASSLEEYKRGNELSTQKILRFASKSRTTKILFSSSSSVY-GFS 128 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P+ E S N Y SK+ E V N +VILR A +Y G +FL +L+L Sbjct: 129 NQPVTETSVLNGNTFYAISKIECESLVRKSKNPFVILRIASIYGPTGKSFLNKLLKL 185 >gi|14590287|ref|NP_142353.1| UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] gi|3256770|dbj|BAA29453.1| 318aa long hypothetical UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] Length = 318 Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 23/134 (17%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 ++DVEI+ D+D A F L+ +P+V I + PE+ + N Sbjct: 57 MRDVEIVSKAVKDVD-------AVFHLAANPEVRIGSQS----------PELLYETNVLI 99 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASY 138 + A + G+ ++ S+ V+ P ++++P P+++YG +KLA E ++ Y Sbjct: 100 TYNLLNAVRNSGVKYLVFTSSSTVYGDAKVIPTPEDYAPLEPISVYGAAKLAAEALISGY 159 Query: 139 TNNY----VILRTA 148 + + +I+R A Sbjct: 160 AHTFDFRALIIRLA 173 >gi|291542775|emb|CBL15885.1| UDP-galactose 4-epimerase [Ruminococcus bromii L2-63] Length = 330 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AA + V ++ P + N G + ++ + GI ++ ST + RT Sbjct: 69 DAVIHFAANSLVGESMTNPLKYYDNNLNGTKVLLQSMVAHGIDKIVFSSTAATYGEPERT 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 PI E PTNP N YG++K + E Sbjct: 129 PILETDPTNPTNCYGETKKSME 150 >gi|312194517|ref|YP_004014578.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] gi|311225853|gb|ADP78708.1| NAD-dependent epimerase/dehydratase [Frankia sp. EuI1c] Length = 341 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 41/225 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG------------------RPDIDLLKP 39 MK LV G G + L+ ++ DV + G R D+ + Sbjct: 1 MKVLVTGTEGYLGSLLAPELLRAGHDVVGLDTGYYNQGWLYRGPDRAPYTLRKDLRHVTA 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D A D +++ A + E PE+ + IN +G+ +A A G+ +Y+ Sbjct: 61 EDLAGV------DAVVHLAELSNDPLGELAPEVTYKINHQGSVRLALLAKRAGVGRFVYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYS--- 152 S+ V+ + + E SP NP Y + K+ E VA ++ LR A Y Sbjct: 115 SSCSVYGVATGGDVTETSPVNPRTAYAECKVMVERDVAPLADDSFSPTFLRNATAYGASP 174 Query: 153 -IFGSNFLLSMLRLAKERREISVVCDQFGTP----TSALQIARAI 192 + L ++ +A EI++ D GTP L IA+AI Sbjct: 175 RMRFDIVLNNLCGVAWTVGEIAMTSD--GTPWRPLVHGLDIAKAI 217 >gi|52082093|ref|YP_080884.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787483|ref|YP_093312.1| hypothetical protein BLi03803 [Bacillus licheniformis ATCC 14580] gi|319647961|ref|ZP_08002179.1| hypothetical protein HMPREF1012_03218 [Bacillus sp. BT1B_CT2] gi|52005304|gb|AAU25246.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52349985|gb|AAU42619.1| putative protein [Bacillus licheniformis ATCC 14580] gi|317390302|gb|EFV71111.1| hypothetical protein HMPREF1012_03218 [Bacillus sp. BT1B_CT2] Length = 309 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ KP + S PD I++ AA +V ++ + +IN G+ I KAA + Sbjct: 53 DITKP-EVIDVIKSIDPDYIVHLAAQVSVAESVSDFLNDENINIRGSLHIIKAAGECNVK 111 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVAS--YTNNYVILRTAW 149 ++ S+ V+ P+D TNP + YG +KL E K+A Y Y ILR + Sbjct: 112 KIVFASSAAVYGNPDYLPVDTRHQTNPGSPYGLTKLTVENYLKLAYDLYGTEYCILRYSN 171 Query: 150 VY 151 VY Sbjct: 172 VY 173 >gi|332159800|ref|YP_004296377.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607661|emb|CBY29159.1| dTDP-glucose 4,6-dehydratase [Yersinia enterocolitica subsp. palearctica Y11] gi|325664030|gb|ADZ40674.1| dTDP-D-glucose-4,6-dehydratase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863551|emb|CBX73666.1| dTDP-glucose 4,6-dehydratase [Yersinia enterocolitica W22703] Length = 355 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 58 VDICDRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQ 117 Query: 94 PC----------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 PLDAEKKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|323343559|ref|ZP_08083786.1| NAD-dependent epimerase [Prevotella oralis ATCC 33269] gi|323095378|gb|EFZ37952.1| NAD-dependent epimerase [Prevotella oralis ATCC 33269] Length = 333 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 21/180 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSF---SPDVIINP 57 K LV G G I + ++ D+E+ RP + +D F+ S D +I Sbjct: 4 KILVTGATGFIGSFIVEEALKRDMEVWAAVRPSSSKIYLQDSRIRFIELDLSSRDRLIEQ 63 Query: 58 AAYTAVDKAED--------EPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDG 106 A+ D E F +N +G + +A + +P IYIS+ V+ Sbjct: 64 LAHEQFDYVVHAAGVTKCLHKEDFFDVNTKGTENLVEALLYLEMPIRRFIYISSLSVYGA 123 Query: 107 LSRTP----IDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLL 160 + I E P YGKSKL E+ + S N+ Y++LR VY ++LL Sbjct: 124 ICENKPYREIREDDTPKPNTAYGKSKLEAEKYLDSIGNDFPYIVLRPTGVYGPREKDYLL 183 >gi|229087736|ref|ZP_04219859.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-44] gi|228695571|gb|EEL48433.1| UDP-glucose 4-epimerase [Bacillus cereus Rock3-44] Length = 337 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 18/164 (10%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K F F + D +++ AA + V + ++P ++ N GA + + D I Sbjct: 60 LRDKSFLRDVFKQETIDAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKIDK 119 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR---- 146 I+ ST + + I E +PTNP N YG++KLA E+ + Y+ Y + R Sbjct: 120 FIFSSTAATYGDVDVELISEETPTNPTNTYGETKLAIEKMLHWYSQASNLKYKVFRYFNV 179 Query: 147 -TAWVYSIFG------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 A I G ++ + +L++A +RE I + D + TP Sbjct: 180 AGATPSGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTP 223 >gi|226950191|ref|YP_002805282.1| UDP-glucose 4-epimerase [Clostridium botulinum A2 str. Kyoto] gi|226841716|gb|ACO84382.1| UDP-glucose 4-epimerase [Clostridium botulinum A2 str. Kyoto] Length = 326 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|116754266|ref|YP_843384.1| dTDP-glucose 4,6-dehydratase [Methanosaeta thermophila PT] gi|116665717|gb|ABK14744.1| dTDP-glucose 4,6-dehydratase [Methanosaeta thermophila PT] Length = 344 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +D D ++N AA T VD++ +P N G + +AA + + ++I Sbjct: 64 RDLVDGLFRDGLDAVVNFAAETHVDRSILDPSPFIDTNVRGTQVLLEAARNHDVGRFVHI 123 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 STD V+ ++ E SP P + Y SK A + +Y +Y + Sbjct: 124 STDEVYGSVTEGRFTEDSPLRPNSPYAASKAAADLLCRAYHISYGV 169 >gi|114704447|ref|ZP_01437355.1| UDP-glucose 4-epimerase [Fulvimarina pelagi HTCC2506] gi|114539232|gb|EAU42352.1| UDP-glucose 4-epimerase [Fulvimarina pelagi HTCC2506] Length = 316 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 22/193 (11%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDL----LKPKDFASF----FLSFSP 51 +K LV G +G + + L + + ++I + R L P D A+ P Sbjct: 9 LKILVSGASGFVGRLLVPELALAGHQVIALVRSGTSLPGKVAAPTDLATLPADALSGHGP 68 Query: 52 -DVIINPAAYTAVDKAE----DEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFD 105 D I+ AA D++E DE + N +G A+AKAA + IP +++ST V Sbjct: 69 FDAAIHLAALNP-DRSERTSRDETAL-LRANRDGTVALAKAAATAKIPHFVFLSTANVH- 125 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEK---VASYTN-NYVILRTAWVYSIFGSNFLLS 161 G PI E SP P Y +SK A E+ VA+ T +LR A VY G + + Sbjct: 126 GPGNAPIVETSPLRPTTPYARSKAAAEQALADVAAATGIRLTVLRPAPVYGPGGRGMIAA 185 Query: 162 MLRLAKERREISV 174 + RLA R + + Sbjct: 186 LQRLAASRLPVPL 198 >gi|329115759|ref|ZP_08244476.1| UDP-glucose 4-epimerase [Streptococcus parauberis NCFD 2020] gi|326906164|gb|EGE53078.1| UDP-glucose 4-epimerase [Streptococcus parauberis NCFD 2020] Length = 331 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ + P F N G + + + G+ I S+ G+ Sbjct: 70 DAVIHFAAYSLVGESMENPLKYFDNNTVGMVKLLEVMNECGVKNIVFSSTAATYGIPEEM 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 PI E + P+N YG+SKL E+ +A +Y +V LR Sbjct: 130 PIKESTAQKPINPYGESKLMMEKIMAWCDQAYGIKFVALR 169 >gi|223999833|ref|XP_002289589.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974797|gb|EED93126.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 387 Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVII+ AA ++ E E A+ IN KA P +Y+STD V++G ++ Sbjct: 117 DVIIHLAALSSPFYCESHAEEAWKINCPVELLSLKA------PIMYMSTDQVYEG-TKQF 169 Query: 112 IDEFSPTNPLNIYGKSKLAGE 132 E T P+N+YG++KLA E Sbjct: 170 YGENDETVPVNVYGRTKLAFE 190 >gi|307594590|ref|YP_003900907.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307549791|gb|ADN49856.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 318 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 13/136 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V + P + F N + +A + ++ S+ V+ Sbjct: 73 DAVFHFAANPEVRVSSISPRVHFEENVVATFNLLEAMREYKVKEMVFASSSSVYGEPEEI 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLLS----- 161 P+DE +P P+++YG SK A E + +Y+ Y VILR A +I G Sbjct: 133 PVDENAPVRPVSVYGASKAACENLIHAYSKLYGIRAVILRYA---NIIGPRLRHGVIYDL 189 Query: 162 MLRLAKERREISVVCD 177 +++L K E+ V+ D Sbjct: 190 LMKLKKNLDELEVLGD 205 >gi|258651992|ref|YP_003201148.1| UDP-glucose 4-epimerase [Nakamurella multipartita DSM 44233] gi|258555217|gb|ACV78159.1| UDP-glucose 4-epimerase [Nakamurella multipartita DSM 44233] Length = 320 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 14/144 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEII-----RVGRPD-----IDLLKP--KDFASFFL 47 MK LV+G G + ++ + + Q +++ G D +D ++ Sbjct: 1 MKALVVGGAGYVGSVVTRLLLAQGHQVVVLDDCSTGHADSIPAGVDFIEADITTAGGVLA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDG 106 D +++ AA + V ++ P + + N G A+ A +P ++ ST + Sbjct: 61 GAGFDAVLHFAAKSLVGESVGHPSLYWRTNVSGTRALLDAITEHRVPTLVFSSTAATYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLA 130 PI E +PT P N YG +KLA Sbjct: 121 PDAVPITEDAPTRPTNTYGATKLA 144 >gi|254464282|ref|ZP_05077693.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium Y4I] gi|206685190|gb|EDZ45672.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium Y4I] Length = 327 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + P +++ AA + V +A EP ++ N G+ + +AA + G + ++ ST + Sbjct: 62 FAKYRPAAVMHFAALSQVGEAMSEPGRYWANNTGGSLNLVEAAVAAGCLDFVFSSTCATY 121 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 +DE +P PLN YG SK A E+ Sbjct: 122 GEHDNVVLDENTPQLPLNAYGASKRAVED 150 >gi|317062353|ref|ZP_07926838.1| UDP-N-acetylglucosamine 4,6-dehydratase [Fusobacterium ulcerans ATCC 49185] gi|313688029|gb|EFS24864.1| UDP-N-acetylglucosamine 4,6-dehydratase [Fusobacterium ulcerans ATCC 49185] Length = 583 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 32/140 (22%) Query: 32 PDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 P+++L+ + K F + P+++ + AA+ V E PE A N G + Sbjct: 306 PNLELISEICNVREKKKLEILFEKYRPNIVFHAAAHKHVPLMEHNPEEAIKNNIFGTKNV 365 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE------EKVAS 137 A+ AD + + ISTD NP N+ G SK A E KVA Sbjct: 366 AECADKYRVERMVLISTD--------------KAVNPTNLMGASKRACELVIQHMNKVAK 411 Query: 138 YTNNYVILRTAWVYSIFGSN 157 +T Y+ +R ++ GSN Sbjct: 412 HT-KYMAVRFG---NVLGSN 427 >gi|218129993|ref|ZP_03458797.1| hypothetical protein BACEGG_01576 [Bacteroides eggerthii DSM 20697] gi|217987851|gb|EEC54177.1| hypothetical protein BACEGG_01576 [Bacteroides eggerthii DSM 20697] Length = 298 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 17/156 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD-----FASFFLSFSP--DV 53 M+ L G++G + S+ S+ ++ VG L P D A F+ D+ Sbjct: 1 MRLLFTGSSGFLGNSIYSLLKNMYDVTTVG------LMPGDNYTINIAKEIPVFNEVYDI 54 Query: 54 IINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRT 110 +++ A ++ K E+E ++ F +N +G + A + GIP I++ST V+ Sbjct: 55 VLHAAGKAHSIPKTEEEKQLFFDVNLQGTKNLCTALERTGIPKAFIFVSTVAVYGCDFGE 114 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVIL 145 I E P N Y SK EE + + + N V+L Sbjct: 115 NITEEHPLNGKTPYAMSKRLAEEFLQEWCSKNEVVL 150 >gi|213964483|ref|ZP_03392683.1| UDP-glucose 4-epimerase [Corynebacterium amycolatum SK46] gi|213952676|gb|EEB64058.1| UDP-glucose 4-epimerase [Corynebacterium amycolatum SK46] Length = 327 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII-------RVGRPDIDLLKPKDFA----SFF 46 MK LV G G + S++ + +V I+ R P+ L D Sbjct: 1 MKLLVTGGAGYVGSVCSAVLISLGHNVTILDNFSVGNRDAVPEGATLVEGDVEDKAYEVL 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 S S D +++ AA + V ++ + P + N + A G ++ ST + Sbjct: 61 SSDSFDGVVHFAAKSLVGESVEVPSDYWHNNVGQTLKLLDAMRDTGTNNLVFSSTAATYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 +TPI E PT P N YG +KLA + +ASY Y I T+ Y Sbjct: 121 EPEKTPITEDMPTAPTNPYGATKLAMDYAIASYAKAYNIGATSLRY 166 >gi|171184963|ref|YP_001793882.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934175|gb|ACB39436.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] Length = 311 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 11/150 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + + D + + AA V + EP + F N + + A G+ Sbjct: 51 DLKEP----GWGVGLRADAVFHFAANPEVRVSTTEPRVHFEENVVATFNVLEWARVSGVR 106 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS- 152 ++ S+ V+ P E P P+++YG +K AGE A+Y Y + A Y+ Sbjct: 107 MVVFASSSTVYGDARVMPTPEDYPLEPVSVYGTAKAAGEVMCATYARLYGVRCLALRYAN 166 Query: 153 IFGSNFLLS-----MLRLAKERREISVVCD 177 + G +++L K+ E+ V+ D Sbjct: 167 VVGPRLRHGALYDFLMKLRKKPEELEVLGD 196 >gi|86742620|ref|YP_483020.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] gi|86569482|gb|ABD13291.1| NAD-dependent epimerase/dehydratase [Frankia sp. CcI3] Length = 342 Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust. Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 48/242 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR--------------------PDIDLLKP 39 MK LV G G + L+ ++D E+I V D+ L Sbjct: 1 MKVLVTGTEGYLGCLLAPELLRDGHEVIGVDTGYYKYGWLYRGVDRTPLTLDKDLRHLTV 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 +DFA D +++ A + P++ + +N G+ +AK A G+ +Y+ Sbjct: 61 EDFAGV------DAVVHMAELSNDPLGALAPDVTYKVNHVGSVRLAKLAKQAGVERFVYM 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG 155 S+ V+ + + E SP NP Y + K+ E VA ++ LR A Y Sbjct: 115 SSCSVYGVATGVDVTEASPVNPQTPYAECKVYVERDVAPLADDTFSPTFLRNATAYGASP 174 Query: 156 SN----FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAI-------IQIAHNLI 200 L ++ +A EI++ D GTP L IA+AI I HN I Sbjct: 175 RQRFDIVLNNLAGVAWTTGEIAMTSD--GTPWRPLVHGLDIAKAIRLVLTAPRDIVHNQI 232 Query: 201 EN 202 N Sbjct: 233 FN 234 >gi|307710776|ref|ZP_07647204.1| UDP-glucose 4-epimerase [Streptococcus mitis SK321] gi|307617382|gb|EFN96554.1| UDP-glucose 4-epimerase [Streptococcus mitis SK321] Length = 332 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKQLDVYDASALKTYLEENKIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --NWKYVIF 169 >gi|269120996|ref|YP_003309173.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] gi|268614874|gb|ACZ09242.1| NAD-dependent epimerase/dehydratase [Sebaldella termitidis ATCC 33386] Length = 304 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 ++ ST V+ P E + T PL+ YG SKL GEE + Y+ NYVILR A VY Sbjct: 115 VFSSTAAVYGIPEEVPSREANKTAPLSPYGLSKLTGEEYIKMYSRLFGVNYVILRYANVY 174 >gi|304314128|ref|YP_003849275.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] gi|302587587|gb|ADL57962.1| predicted dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] Length = 336 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV++N AA + VD++ ++P I N G + +A+ G+ I ISTD V+ Sbjct: 74 DVVVNFAAESHVDRSIEDPGIFIRTNVMGTQTLLEASRRQGVERFIQISTDEVYGSTEEG 133 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + +Y Y Sbjct: 134 YFTEETPLAPNSPYSASKASADLIARAYNRTY 165 >gi|300853732|ref|YP_003778716.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] gi|300433847|gb|ADK13614.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 22/124 (17%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F + D +IN AA + VD++ +PE+ N G A+ A + Sbjct: 60 DICDREKLQQLFQKYDIDYVINFAAESHVDRSIRDPEVFVKTNVLGTVALLDTAKNAWTV 119 Query: 92 ------GIPCIYISTDYVFDGL-------SRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + +STD V+ L +TP+D SP Y SK + + V +Y Sbjct: 120 EDGFKEGKKYLQVSTDEVYGSLGKEGYFTEKTPLDSHSP------YSSSKASADLMVKAY 173 Query: 139 TNNY 142 + Y Sbjct: 174 FDTY 177 >gi|295695515|ref|YP_003588753.1| UDP-glucose 4-epimerase [Bacillus tusciae DSM 2912] gi|295411117|gb|ADG05609.1| UDP-glucose 4-epimerase [Bacillus tusciae DSM 2912] Length = 327 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS-TDYVFDGLSRTPIDEFS 116 AA + V ++ PE+ FS N A +A G+ I +S T V+ R PI E Sbjct: 78 AAKSVVAESVRHPEVYFSENVAKGIAFFRALCEAGVSRIVLSSTAAVYGNPERVPIPEEH 137 Query: 117 PTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 P P+N YG SK+ E+ + ++ +V LR Sbjct: 138 PVRPINPYGASKVMLEQVLGWLETTFPMRWVALR 171 >gi|225851526|ref|YP_002731760.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] gi|225646301|gb|ACO04487.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] Length = 324 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDL F F PD +++ AA V ++ +P + N + + G+ Sbjct: 49 IDLKNKTALEDIFKRFKPDAVMHFAASIEVGESVKKPLKYYQNNTANTLNLLETMLEYGV 108 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 I+ ST V+ + PI E P NP+N YG+SK Sbjct: 109 NKFIFSSTAAVYGTPVKVPIPEDHPINPINPYGQSK 144 >gi|184154772|ref|YP_001843112.1| UDP-glucose 4-epimerase [Lactobacillus fermentum IFO 3956] gi|227514045|ref|ZP_03944094.1| UDP-glucose 4-epimerase [Lactobacillus fermentum ATCC 14931] gi|260663199|ref|ZP_05864091.1| UDP-glucose 4-epimerase [Lactobacillus fermentum 28-3-CHN] gi|183226116|dbj|BAG26632.1| UDP-glucose 4-epimerase [Lactobacillus fermentum IFO 3956] gi|227087594|gb|EEI22906.1| UDP-glucose 4-epimerase [Lactobacillus fermentum ATCC 14931] gi|260552391|gb|EEX25442.1| UDP-glucose 4-epimerase [Lactobacillus fermentum 28-3-CHN] gi|299782864|gb|ADJ40862.1| UDP-glucose 4-epimerase [Lactobacillus fermentum CECT 5716] Length = 331 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F++ +++ AA++ V ++ EP F N G + +A + I S+ Sbjct: 62 FINEDIKAVVHFAAFSIVPESMSEPLKYFDNNTGGMITLLEAMRDFKVKYIVFSSTAATY 121 Query: 106 GL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFG----- 155 G+ PI E P P+N YG SKL E +A +Y +V LR +++ G Sbjct: 122 GVPEHMPIKETDPQKPINPYGLSKLMMEHMMAWADSAYGVKFVALR---YFNVAGAAPDG 178 Query: 156 ---------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + ++++A+ +R E+S+ D + TP Sbjct: 179 SIGEDHGPETHLVPIIMQVAQGKRAELSIFGDDYNTP 215 >gi|298377761|ref|ZP_06987712.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] gi|298265464|gb|EFI07126.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] Length = 242 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 61/219 (27%), Positives = 84/219 (38%), Gaps = 41/219 (18%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ + F PD + + AAY V ED PE + N +G IA A G Sbjct: 17 DICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEESVRNNVDGTRVIADLAVKYGTR 76 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAW 149 + +STD NP N+ G SK E V S + V RT + Sbjct: 77 KFVMVSTD--------------KAVNPTNVMGCSKRICEIYVQSLDQAIKDGKVSGRTQF 122 Query: 150 VYSIFGSNFL---LSMLRLAKERREISVVCDQFGTPTSALQ--IARAIIQI--AHNLIEN 202 V + FG N L S++ L KE+ + G P + I R + I A L+ Sbjct: 123 VTTRFG-NVLGSNGSVIPLFKEQ-------IKRGGPVTVTHKDIIRFFMLIPEACKLVLE 174 Query: 203 SDTSLRG----IFHMTADGGPVSWADFAEYIFWESAERG 237 + T G +F M G PV D AE + S +G Sbjct: 175 AGTMGNGGEIFVFDM---GKPVRIVDLAERMIRLSGVKG 210 >gi|148380737|ref|YP_001255278.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|153933242|ref|YP_001385021.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 19397] gi|153935807|ref|YP_001388491.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. Hall] gi|148290221|emb|CAL84340.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|152929286|gb|ABS34786.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 19397] gi|152931721|gb|ABS37220.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. Hall] Length = 326 Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|260222089|emb|CBA31308.1| hypothetical protein Csp_F36870 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 313 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 49/231 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKP-KDFASFFLSFSP-------- 51 M+ L++G +G + L+ Q +R+G + D ++ + L + Sbjct: 1 MRILIVGASGLLGSRLALNLAQHGHQVRLGSRNPDSMRSMRGHEVITLRWDEPQSLQMAC 60 Query: 52 ---DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGL 107 DV+++ A A D A D P A IN +A AA S G+ C+ Y ST +V+ Sbjct: 61 REMDVVLHAAGMNAADCAAD-PVGALQINGVATARLAAAAASAGVGCLMYFSTAHVYASP 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS-MLRLA 166 + + E L+ Y S LAGE + +L+TA GSN L S +LRL+ Sbjct: 120 LQGRVSEQDCPGNLHPYASSHLAGE---------FAVLQTA------GSNGLKSVVLRLS 164 Query: 167 KERREISVVCDQFGTPTS---------ALQIARAIIQIAHNLIENSDTSLR 208 + FG P + A + R + Q +++S T R Sbjct: 165 ----------NAFGAPGNPDALCWTLLAHDVCRQLAQTGRIRLQSSGTQWR 205 >gi|295670053|ref|XP_002795574.1| UDP-glucose 4-epimerase [Paracoccidioides brasiliensis Pb01] gi|226284659|gb|EEH40225.1| UDP-glucose 4-epimerase [Paracoccidioides brasiliensis Pb01] Length = 374 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP+ D+ K DF F PD+ +I+ AA AV ++ ++P Sbjct: 40 SEEVINRIELICGKRPEFAKADVTKEADFDRIFEQH-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYHVNVCGSICLLRSMKRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K+A E + N Sbjct: 159 TKVAVETAITDMIN 172 >gi|188581248|ref|YP_001924693.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] gi|179344746|gb|ACB80158.1| NAD-dependent epimerase/dehydratase [Methylobacterium populi BJ001] Length = 307 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 5/135 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + A+ D +++ A E + S N E +A+AA + Sbjct: 51 DLARPMNMAAALSGV--DAVVHSAGLAHAMSGAPEDDFRNS-NTEATRHLAEAAQRAKVS 107 Query: 95 -CIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +++S+ G S P+ E P + YG+SKLA EE +A ++V LR VY Sbjct: 108 RFVFLSSIRAQVGASAPAPVSEADAAAPTDAYGRSKLAAEEALAGTGLDWVALRPVLVYG 167 Query: 153 IFGSNFLLSMLRLAK 167 + ++L LA+ Sbjct: 168 EGVKGNMAALLTLAR 182 >gi|77461901|ref|YP_351408.1| NAD-dependent epimerase/dehydratase [Pseudomonas fluorescens Pf0-1] gi|77385904|gb|ABA77417.1| putative NAD-dependent epimerase/dehydratase protein [Pseudomonas fluorescens Pf0-1] Length = 303 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 9/136 (6%) Query: 4 LVIGNNGQIAQSLSS-MCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + G +G + Q + S + +D E++ P DL P + PD +I+ A Sbjct: 6 FITGLSGFVGQHIQSRLQGEDASWELLSAASP-YDLTNPDSLIDLWPQL-PDAVIHLAGQ 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSR--TPIDEFS 116 T V +A +P F IN G + +A + G +Y+S+ V+ + PI E Sbjct: 64 TFVPEAFRDPARTFDINLLGTLNLLQALKARGFKGTFLYVSSGDVYGQVEEPALPITEQQ 123 Query: 117 PTNPLNIYGKSKLAGE 132 P P N Y SKL+ E Sbjct: 124 PPCPRNPYAVSKLSAE 139 >gi|15966500|ref|NP_386853.1| sulfolipid biosynthesis protein [Sinorhizobium meliloti 1021] gi|307300463|ref|ZP_07580243.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] gi|307318328|ref|ZP_07597763.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|7021340|gb|AAF35290.1|AF194444_3 SqdC [Sinorhizobium meliloti] gi|15075771|emb|CAC47326.1| Epimerase [Sinorhizobium meliloti 1021] gi|306896010|gb|EFN26761.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|306904629|gb|EFN35213.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti BL225C] Length = 308 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 D+P N +G+ + + A + G+ C+++S+ V+ + + E SP P YG+ Sbjct: 86 DDPTSFRRANLDGSVRLFEEARAAGVRRCVFLSSRAVYGETAPPVVAETSPVEPDTFYGQ 145 Query: 127 SKLAGEEKVASYTNNYVI---LRTAWVYSIFGSN 157 KLA E + S T++ + LR VY GS Sbjct: 146 VKLATENALKSMTDHSFVTTSLRVTGVYGPAGSG 179 >gi|218458459|ref|ZP_03498550.1| UDP-glucuronic acid epimerase protein [Rhizobium etli Kim 5] Length = 167 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 4/129 (3%) Query: 31 RPDIDLLKPKD-FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 +P I +L+ + + L+ PD++I+ AA V + + PE N EG+ I + A Sbjct: 13 KPVIAMLEDRPALEAAVLAAKPDILIHLAAQAGVRYSLENPEAYLHSNVEGSWNIMEIAR 72 Query: 90 SIGIPCIYI-STDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRT 147 + + + + ST ++ + P E + PL IY +K + E SY + + I T Sbjct: 73 RVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTT 132 Query: 148 AW-VYSIFG 155 A+ ++++G Sbjct: 133 AFRFFTVYG 141 >gi|163814428|ref|ZP_02205817.1| hypothetical protein COPEUT_00579 [Coprococcus eutactus ATCC 27759] gi|158450063|gb|EDP27058.1| hypothetical protein COPEUT_00579 [Coprococcus eutactus ATCC 27759] Length = 339 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + P I N G + A GI Sbjct: 58 LDICDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPMIFLQTNIIGTATLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + V +Y Y Sbjct: 118 QRYHQVSTDEVYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|160935034|ref|ZP_02082420.1| hypothetical protein CLOLEP_03910 [Clostridium leptum DSM 753] gi|156866487|gb|EDO59859.1| hypothetical protein CLOLEP_03910 [Clostridium leptum DSM 753] Length = 352 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSIN----------AEGAGAI 84 D+ + S F + D ++N AA + VD++ PEI N A+ A A+ Sbjct: 60 DICDKEAIQSLFDQYDIDYVVNFAAESHVDRSITNPEIFVQTNVLGTVNLLNIAKNAWAV 119 Query: 85 AKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + +STD V+ L + E +P +P + Y SK + + V +Y++ Y Sbjct: 120 GDDQYKDGVKFMQVSTDEVYGSLGAEGFFMETTPLDPHSPYSSSKASADLFVKAYSDTY 178 >gi|152971036|ref|YP_001336145.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955885|gb|ABR77915.1| dTDP-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 354 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 19/154 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M CL N +SL++ V D E R D+ K + F F PD++++ AA Sbjct: 31 MDCLTYAGN---LESLAT--VADSE--RYSFTQTDITDAKSVSEQFSDFRPDIVMHLAAE 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAK----------AADSIGIPCIYISTDYVFDGLSRT 110 + VD++ D P N G + + AA +ISTD V+ L T Sbjct: 84 SHVDRSIDGPAAFIQTNLIGTFTLLEAARHYYSTLDAAQKQAFRFHHISTDEVYGDLHGT 143 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V ++ Y Sbjct: 144 DDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTY 177 >gi|320593289|gb|EFX05698.1| udp-glucose 4-epimerase [Grosmannia clavigera kw1407] Length = 371 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----DVIINPAAYTAVDKAEDEPEI 72 S + + +E+I RP + D ++ F+ D +I+ AA AV ++ + P Sbjct: 40 SEVALDRIELICGRRPVFHKVDVTDESALDAVFAAHPAIDSVIHFAALKAVGESGEIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + + +P I + S+ V+ +R PI E PT P N YG++ Sbjct: 100 YYRVNVAGSITLMRIMAKHNVPNIVFSSSATVYGDATRFPNMIPIPETCPTGPTNTYGRT 159 Query: 128 KLAGEEKVASYTN 140 KL E + + N Sbjct: 160 KLMIESVITDFIN 172 >gi|298486947|ref|ZP_07005000.1| UDP-glucose 4-epimerase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158509|gb|EFH99576.1| UDP-glucose 4-epimerase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 342 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F +++ A AV ++ EP F N G+ + +A + G+ ++ S+ V Sbjct: 67 LFARHPVKAVVHCAGLKAVGESVREPLRYFETNVSGSVNLCQAMEQAGVLNLLFSSSATV 126 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVAS 137 + + P+DE P P N YG SKL E + S Sbjct: 127 YGDREQMPLDENCPPGLPTNPYGHSKLMAEHVMKS 161 >gi|289626699|ref|ZP_06459653.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646257|ref|ZP_06477600.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. aesculi str. 2250] gi|330866822|gb|EGH01531.1| UDP-glucose 4-epimerase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 342 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F +++ A AV ++ EP F N G+ + +A + G+ ++ S+ V Sbjct: 67 LFARHPVKAVVHCAGLKAVGESVREPLRYFETNVSGSVNLCQAMEQAGVFNLLFSSSATV 126 Query: 104 FDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVAS 137 + + P+DE P P N YG SKL E + S Sbjct: 127 YGDREQMPLDENCPPGLPTNPYGHSKLMAEHVMKS 161 >gi|226941715|ref|YP_002796789.1| WbmG [Laribacter hongkongensis HLHK9] gi|226716642|gb|ACO75780.1| WbmG [Laribacter hongkongensis HLHK9] Length = 310 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F F PDV+I+ AA A +D E + + N G+ +A+AA +IG+ I T + Sbjct: 64 FSQFKPDVVIHAAA--AYKDPDDWIEDSRT-NVIGSAYVARAAKAIGVKRLINFQTALCY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + PI PT P YG +K AGE+ Sbjct: 121 GRPKQLPIFANHPTAPFTSYGITKTAGEQ 149 >gi|254478847|ref|ZP_05092212.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035209|gb|EEB75918.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 328 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 +V+ + AA + + P N EG + +AA +G+ I+ ST V+ Sbjct: 77 EVVFHLAALIGIPYSYVSPLAYIKTNIEGTYNVLQAARELGVEKVIHTSTSEVYGTAKYV 136 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y +K++ + S+ N++ Sbjct: 137 PIDELHPLQPQSPYSATKISADNIALSFYNSF 168 >gi|167770813|ref|ZP_02442866.1| hypothetical protein ANACOL_02164 [Anaerotruncus colihominis DSM 17241] gi|167666853|gb|EDS10983.1| hypothetical protein ANACOL_02164 [Anaerotruncus colihominis DSM 17241] Length = 339 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 11/105 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVF 104 F + PD+++N AA + VD++ ++P I N G + A GI + +STD V+ Sbjct: 70 FEAERPDIVVNFAAESHVDRSIEDPAIFLKTNVMGTQVLLDACRKYGISRYHQVSTDEVY 129 Query: 105 DGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 L P+D F+ PL+ Y SK A + +Y Y Sbjct: 130 GDL---PLDRPDLFFTEQTPLHTSSPYSASKAAADLLCNAYHRTY 171 >gi|154250117|ref|YP_001410942.1| NAD-dependent epimerase/dehydratase [Fervidobacterium nodosum Rt17-B1] gi|154154053|gb|ABS61285.1| NAD-dependent epimerase/dehydratase [Fervidobacterium nodosum Rt17-B1] Length = 322 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 34/157 (21%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN------ 56 LV G G + L + + E +RV L++P D + + L + P ++ Sbjct: 2 VLVTGGTGHLGNVLIKKLITEGEKVRV------LVQPGD-SLYSLQYLPIEVVYGDIRGD 54 Query: 57 -PAAYTAVDKA----------EDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 A++ VD ++ +S+N +G I A IP IY+S+ + F Sbjct: 55 IKKAFSGVDAVFHLASVISITNSNKKLIYSVNVDGTNNIINLAKEHRIPLIYVSSVHAFS 114 Query: 106 GLS-------RTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + +TPIDE N + Y KSK +KV Sbjct: 115 EVKPGSVIDEKTPIDE---NNVVGDYAKSKAIATKKV 148 >gi|14591500|ref|NP_143580.1| UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] gi|3258173|dbj|BAA30856.1| 306aa long hypothetical UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] Length = 306 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D + + AA +V ++ ++P +N G + +A I+ S+ V+ P Sbjct: 68 DYVFHEAAQISVKESIEDPVFTEEVNVIGTINVLRALSQGDGKLIFASSAAVYGEPKELP 127 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 I E + TNP++ YG +KLA E Y + Y VILR VY Sbjct: 128 ITEDTLTNPISPYGITKLAAEHYCRVYQSLYGIPVVILRYFNVY 171 >gi|119384853|ref|YP_915909.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] gi|119374620|gb|ABL70213.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] Length = 345 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 9/101 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIYISTDY 102 PD I++ AA + VD++ D P N G + +AA + G +ISTD Sbjct: 73 PDAIMHLAAESHVDRSIDGPGAFIETNVTGTYNLLEAARAWWTAQGRPEGFRFHHISTDE 132 Query: 103 VFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 VF L T E +P +P + Y SK A + V ++ Y Sbjct: 133 VFGSLGETGQFTEDTPYDPRSPYSASKAASDHLVRAWHETY 173 >gi|307565288|ref|ZP_07627781.1| dTDP-glucose 4,6-dehydratase [Prevotella amnii CRIS 21A-A] gi|307345957|gb|EFN91301.1| dTDP-glucose 4,6-dehydratase [Prevotella amnii CRIS 21A-A] Length = 384 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 16/124 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ K + F D ++N AA + VD++ ++P++ S+N G + AA Sbjct: 63 DIRDRKLLNNIFSQHDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQCLMDAAKHAWVT 122 Query: 89 --DSIGIPCI-------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 D+ G P +STD V+ L E SP P + Y SK + + V +Y Sbjct: 123 GKDAQGYPTWKEGKRYHQVSTDEVYGSLGNEGFFTETSPLCPHSPYSASKTSADHIVKAY 182 Query: 139 TNNY 142 + Y Sbjct: 183 HDTY 186 >gi|254167417|ref|ZP_04874269.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] gi|197623680|gb|EDY36243.1| NAD dependent epimerase/dehydratase family [Aciduliprofundum boonei T469] Length = 315 Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 20/148 (13%) Query: 2 KCLVIGNNGQIAQSL-----SSMCVQDVEIIRVGRPD--------IDLLKPKDFASFFLS 48 + LV G GQI +L + ++V + + PD +D+L K Sbjct: 3 RILVTGGLGQIGSNLVPFLRNKYGKENVVVADIREPDNDVSPFVKLDILDKKSLERVIDE 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + D I + AA + K E P++AF++N G I + G+ I + + G Sbjct: 63 YDVDTIYHLAAILSA-KGEKNPQLAFNVNIVGLYNILEVGREFGLERIMVPSSIAAFG-P 120 Query: 109 RTPIDEFSPTN----PLNIYGKSKLAGE 132 TP D +P + P +YG SK+ GE Sbjct: 121 ETPKDN-TPNDTVLRPRTMYGISKVTGE 147 >gi|120554631|ref|YP_958982.1| UDP-glucose 4-epimerase [Marinobacter aquaeolei VT8] gi|120324480|gb|ABM18795.1| UDP-galactose 4-epimerase [Marinobacter aquaeolei VT8] Length = 329 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + ++ F + +++ AA V ++ P +S N + K + +P Sbjct: 50 DLADEQALSAVFSQHKFEAVLHFAANIVVPESVSNPLKYYSNNTRNTLNLLKMVEHYQVP 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 ++ ST V+ +T + E P P+N YG SK+ E + A+ + NYVILR Sbjct: 110 YMVFSSTAAVYGMPEQTVLTEDLPLAPINPYGASKMMSERMMMDLAAASSLNYVILR--- 166 Query: 150 VYSIFGSN 157 +++ G+N Sbjct: 167 YFNVAGAN 174 >gi|302541353|ref|ZP_07293695.1| UDP-glucose 4-epimerase [Streptomyces hygroscopicus ATCC 53653] gi|302458971|gb|EFL22064.1| UDP-glucose 4-epimerase [Streptomyces himastatinicus ATCC 53653] Length = 328 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 I+ + +DV ++R D +LL + FA ++ +++ AA V ++ ++P Sbjct: 33 ISSGIPERLPEDVPLVRGSTLDRELLD-RTFAELNITG----VVHLAAKKQVGESVEQPL 87 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLA 130 + N G + +A + GI S+ G+ + E +P P+N YG++KLA Sbjct: 88 RYYRENVHGLTVLLEAVAAAGIGSFLFSSSAAVYGMPDVELVTEDTPCVPMNPYGETKLA 147 Query: 131 GE 132 GE Sbjct: 148 GE 149 >gi|218661417|ref|ZP_03517347.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli IE4771] Length = 324 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AE EP +AF + AEG + +AA G+ + ++ GL+ + Sbjct: 75 DIVFHQAAIRITQCAE-EPRLAFEVLAEGTFNVLEAAVKTGVSKVVAASSASVLGLAESF 133 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 +E P N IYG +K E + S+ + YV LR VY Sbjct: 134 PTTEEHHPYNNRTIYGAAKTFNEGLLRSFADMYGLRYVALRYFNVY 179 >gi|153939052|ref|YP_001392057.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. Langeland] gi|170755731|ref|YP_001782385.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] gi|152934948|gb|ABS40446.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. Langeland] gi|169120943|gb|ACA44779.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] gi|295320069|gb|ADG00447.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. 230613] gi|322807090|emb|CBZ04664.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 326 Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|294853659|ref|ZP_06794331.1| UDP-glucose 4-epimerase [Brucella sp. NVSL 07-0026] gi|294819314|gb|EFG36314.1| UDP-glucose 4-epimerase [Brucella sp. NVSL 07-0026] Length = 328 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L ++P +I+ AA V ++ ++P + N G ++ A Sbjct: 53 DILDQARLVKTMEKYAPVAVIHFAASAYVGESVEDPAKYYRNNVGGTQSLLDACRLTRTQ 112 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S+ G+ SR PI E NP+N YG +KL E +A Y Y + A Y Sbjct: 113 NVIFSSSCATYGVPSRLPIGEGEAQNPINPYGCTKLIAEHMLADYAVAYGLRYVALRY 170 >gi|255533800|ref|YP_003094172.1| polysaccharide biosynthesis protein CapD [Pedobacter heparinus DSM 2366] gi|255346784|gb|ACU06110.1| polysaccharide biosynthesis protein CapD [Pedobacter heparinus DSM 2366] Length = 652 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 15/108 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ K + F ++ P + + AAY V ED P A N G IA + G+ Sbjct: 344 DVKDQKRMETLFNTYKPHYVYHAAAYKHVPLMEDNPAEAIKTNVMGTKTIADLSVKHGVQ 403 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + ISTD NP N+ G SK E V S N+ Sbjct: 404 KFVMISTD--------------KAVNPTNVMGASKRIAEIYVQSLNNS 437 >gi|158335216|ref|YP_001516388.1| UDP-glucose 4-epimerase [Acaryochloris marina MBIC11017] gi|158305457|gb|ABW27074.1| UDP-glucose 4-epimerase [Acaryochloris marina MBIC11017] Length = 320 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 16/187 (8%) Query: 52 DVIINPAAYTAVDKAE-DEPEIAFS-INAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 D++I+ A+ + K +P AF +N EG A+A+ + G+ ++IS+ LS Sbjct: 66 DIVIHLASRAHILKETVADPMAAFKEVNVEGTQALAQQSIKAGVQHFVFISSIGAMATLS 125 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 + E SP P + YG+SK E+ + + T ++IF + Sbjct: 126 DVGLTEASPCRPDSPYGRSKWQAEQDLMALAQP-----TKMRWTIFRPTLVYGPRNPGNM 180 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIE------NSDTSLRGIFHMTADGGPVSW 222 R I +V F P + R+++ + NL+E N + F + +DG VS Sbjct: 181 ARLIKLVDQGFPLPFGLINNRRSLVYVG-NLVEAIVASLNHPQAFNKTF-LISDGRTVST 238 Query: 223 ADFAEYI 229 A+ I Sbjct: 239 AELIRAI 245 >gi|150006802|ref|YP_001301545.1| putative nucleotide-diphosphate sugar epimerase [Parabacteroides distasonis ATCC 8503] gi|149935226|gb|ABR41923.1| putative nucleotide-diphosphate sugar epimerase [Parabacteroides distasonis ATCC 8503] Length = 543 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 53/139 (38%), Gaps = 26/139 (18%) Query: 30 GRPDI-------DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG 82 G PDI D+ + F PD + + AAY V ED PE + N +G Sbjct: 250 GWPDIESYTVVSDICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEESVRNNVDGTR 309 Query: 83 AIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--- 138 IA A G + +STD NP N+ G SK E V S Sbjct: 310 VIADLAVKYGTRKFVMVSTD--------------KAVNPTNVMGCSKRICEIYVQSLDQA 355 Query: 139 -TNNYVILRTAWVYSIFGS 156 + V RT +V + FG+ Sbjct: 356 IKDGKVSGRTQFVTTRFGN 374 >gi|149203263|ref|ZP_01880233.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. TM1035] gi|149143096|gb|EDM31135.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. TM1035] Length = 349 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 11/108 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIY 97 F + +PD +++ AA + VD++ D P N G + +AA G + Sbjct: 68 FATHAPDAVLHLAAESHVDRSIDGPGTFVETNITGTYNLLEAARGYWQARNKPEGFRFQH 127 Query: 98 ISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L P +F +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVYGSLPSDPRIKFTEDTPYDPRSPYSASKAASDHLVRAWHETY 175 >gi|62866782|gb|AAY17299.1| CpsG [Streptococcus iniae] Length = 286 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAY 60 K L+ G N I SL Q E V +D++ P ++ +F FSP D I + AA Sbjct: 3 KVLITGANSYIGTSLEKWLQQSEEQYHVD--TLDMIDP-NWKTF--DFSPYDSIFHVAAI 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTN 119 ++ + ++ +N + +A A G+ I++S+ V+ G I + N Sbjct: 58 VHKNEKQMNSDLYEKVNTKLPIELATIAKHSGLRQFIFLSSMSVY-GNDTEEITRETREN 116 Query: 120 PLNIYGKSKLAGE---EKVASYTNNYVILRTAWVY 151 P + YGKSKLA E + + S + +ILR VY Sbjct: 117 PSSYYGKSKLAAEIGLKDLQSDSFKVLILRPPMVY 151 >gi|33597793|ref|NP_885436.1| hypothetical protein BPP3269 [Bordetella parapertussis 12822] gi|33574222|emb|CAE38554.1| conserved hypothetical protein [Bordetella parapertussis] Length = 294 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 9/136 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P A PD + Y A D P I +G + A D+ + Sbjct: 49 DLTQPATLAGL-----PDGLTQ-VVYLPAPGARD-PARYREIFVDGLRHLRDALDTAALR 101 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +++S+ V+ +DE +P PL G+S L E + ++ V+LR A +Y Sbjct: 102 RTLFVSSSAVYGEHDGQWVDEHTPPGPLGFNGRSLLEAERSLDAWPGQAVVLRLAGLYGP 161 Query: 154 FGSNFLLSMLRLAKER 169 G LL LR + R Sbjct: 162 -GRLQLLERLRAGQAR 176 >gi|326478238|gb|EGE02248.1| UDP-glucose 4-epimerase [Trichophyton equinum CBS 127.97] Length = 374 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDKVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTNN 141 K+A E + N+ Sbjct: 160 KVAIESAITDMVNS 173 >gi|269119203|ref|YP_003307380.1| UDP-glucose 4-epimerase [Sebaldella termitidis ATCC 33386] gi|268613081|gb|ACZ07449.1| UDP-glucose 4-epimerase [Sebaldella termitidis ATCC 33386] Length = 325 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 1/141 (0%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 I +LS + EI+ V + DL + F D++++ AA+ V ++ P Sbjct: 29 IYDNLSKGHKEAGEILGVKLINGDLGDKERLKKVFSDEKIDIVMHFAAFIEVGESVTAPA 88 Query: 72 IAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 ++ N + A + ++ ST F I E P P+N YGKSKL Sbjct: 89 KYYNNNVSKVLELLDAMVESNVKYFVFSSTAATFGEPETEKISETHPQKPINPYGKSKLM 148 Query: 131 GEEKVASYTNNYVILRTAWVY 151 EE + Y N Y + T Y Sbjct: 149 VEEILKDYDNAYGLKSTVLRY 169 >gi|188589709|ref|YP_001922379.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] gi|188499990|gb|ACD53126.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum E3 str. Alaska E43] Length = 339 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+I+N AA + VD++ + PEI N G + A GI Sbjct: 58 IDIADRETVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIMGTAVLMDACIKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L PID F+ P++ Sbjct: 118 NRYHQVSTDEVYGDL---PIDRPDLFFTEETPIH 148 >gi|170726037|ref|YP_001760063.1| dTDP-glucose 4,6-dehydratase [Shewanella woodyi ATCC 51908] gi|169811384|gb|ACA85968.1| dTDP-glucose 4,6-dehydratase [Shewanella woodyi ATCC 51908] Length = 363 Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 11/105 (10%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------GIPCIYI 98 F PD I+N AA + VD++ + P N G ++ +AA S G +I Sbjct: 74 FQPDFIMNLAAESHVDRSIEGPSAFIETNILGTFSLLEAARSYCLTLSDEKRHGFRFHHI 133 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 STD V+ L T E SP P + Y SK A + V +++ Y Sbjct: 134 STDEVYGELGDTGYFTEESPYLPSSPYSASKAASDHLVRAWSRTY 178 >gi|322377645|ref|ZP_08052135.1| UDP-glucose 4-epimerase [Streptococcus sp. M334] gi|321281410|gb|EFX58420.1| UDP-glucose 4-epimerase [Streptococcus sp. M334] Length = 331 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKQLDVYDASALKAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLLDPVNPYAETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|168180814|ref|ZP_02615478.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] gi|182668202|gb|EDT80181.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] Length = 326 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ K+F + F D +I+ AA++ V ++ +EP ++ N G ++ + + Sbjct: 51 LRDKEFLNKVFNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQK 110 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + PI E T P N YG++KLA E+ + +Y YV+LR Sbjct: 111 IVFSSTAATYGEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLR 166 >gi|147677436|ref|YP_001211651.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146273533|dbj|BAF59282.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 312 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE----KVASYT 139 + KAA S +Y+S+ V+ P+DE P P+ I+G KLAGE AS Sbjct: 105 LIKAALSRNALLVYVSSIAVYGNDKYIPMDENHPLEPVLIHGAVKLAGENFCRTMAASNG 164 Query: 140 NNYVILRTAWVYS 152 VILR A +Y Sbjct: 165 LRMVILRVADIYG 177 >gi|325859689|ref|ZP_08172819.1| NAD dependent epimerase/dehydratase family protein [Prevotella denticola CRIS 18C-A] gi|325482615|gb|EGC85618.1| NAD dependent epimerase/dehydratase family protein [Prevotella denticola CRIS 18C-A] Length = 338 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%) Query: 52 DVIINPAAYTA-VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IYISTDYVFDGL 107 D +++ A T +DKA+ F +N +G +A + P +++S+ +F + Sbjct: 78 DYVVHAAGVTKCLDKAD-----FFRVNRDGTRNFVQALQELNQPLERFVFLSSLSIFGAV 132 Query: 108 -SRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 + P E PT+ P YGKSKL E + S + YVILR VY ++ L Sbjct: 133 REQQPYKEIEPTDTPQPNTAYGKSKLEAESSLPS-SFPYVILRPTGVYGPREKDYFL 188 >gi|325971753|ref|YP_004247944.1| UDP-glucose 4-epimerase [Spirochaeta sp. Buddy] gi|324026991|gb|ADY13750.1| UDP-glucose 4-epimerase [Spirochaeta sp. Buddy] Length = 328 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY-VFD 105 LS DV+I+ AA+ A ++ +P N G+ + G+ +S+ V+ Sbjct: 62 LSLGWDVVIHMAAFKAAGESMIKPIKYSENNIAGSLNLITGCIKAGVKRFILSSSAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 + P+DE P NP N YG +KL EE + Y YV LR Sbjct: 122 EPAYLPVDENHPKNPTNYYGYTKLCIEENLKWYAQLKEFEYVSLR 166 >gi|304314773|ref|YP_003849920.1| UDP-glucose 4-epimerase [Methanothermobacter marburgensis str. Marburg] gi|302588232|gb|ADL58607.1| UDP-glucose 4-epimerase [Methanothermobacter marburgensis str. Marburg] Length = 323 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + + +++ AA+T V ++ +P + N + + G+ Sbjct: 49 DLGDRRLLNRILTEYDVEAVMHFAAFTDVGESVQKPGDYYRNNVVNTMNLLDSMLKNGVG 108 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ ST V+ S PI E P NP++ YG+SKL EE + Y++ Y Sbjct: 109 RFVFSSTCAVYGNPSEIPITEEHPLNPISPYGRSKLMVEEILRDYSDAY 157 >gi|160914759|ref|ZP_02076973.1| hypothetical protein EUBDOL_00766 [Eubacterium dolichum DSM 3991] gi|158433299|gb|EDP11588.1| hypothetical protein EUBDOL_00766 [Eubacterium dolichum DSM 3991] Length = 342 Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DV++N AA + VD++ ++PEI N G + A GI + +STD V+ L Sbjct: 76 DVVVNFAAESHVDRSIEDPEIFVKTNVMGTTTLLDACVKYGITRYHQVSTDEVYGDL--- 132 Query: 111 PIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 P+D F+ T PL+ Y +K + + V +Y Y Sbjct: 133 PLDRPDLFFTETTPLHTSSPYSSAKASADLFVLAYHRTY 171 >gi|326781936|ref|YP_004322338.1| nucleotide-sugar epimerase [Synechococcus phage S-SM2] gi|310003126|gb|ADO97524.1| nucleotide-sugar epimerase [Synechococcus phage S-SM2] Length = 339 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 45/180 (25%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDI--DLLKPKDFASFFLSFSPDV---- 53 + L+ G G IA L ++ D E+I + R D +L + D LSF P+V Sbjct: 3 RVLITGGAGFIAHHLIGQILETTDWEVITLDRLDYSGNLNRLHDL---MLSFDPEVRKRV 59 Query: 54 ------------------------IINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AK 86 I++ AA + VD++ + P N G I A+ Sbjct: 60 RVVHHDLKAELNPMVCREIGNVDYILHLAAGSHVDRSIEYPLEFVMDNVVGTCNILDFAR 119 Query: 87 AADSIGIPCIYISTDYVF----DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY STD VF DG+ D ++ TNP Y SK GEE +Y N Y Sbjct: 120 TQKENLERFIYFSTDEVFGPAPDGIKYKENDRYNSTNP---YSASKAGGEELAVAYENTY 176 >gi|262199765|ref|YP_003270974.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] gi|262083112|gb|ACY19081.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM 14365] Length = 320 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 16/157 (10%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVG-RP------------DIDLLKPKDFASFF 46 MK L+ G GQI + L ++ + E+I RP +D+ + Sbjct: 1 MKFLITGAGGQIGRELVAAFAAEGHELIAADLRPFEQRGVAGERWVALDVRDREQVFELL 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 P I + AA + + E +P++ + +N G + + A G+ I+ ST V+ Sbjct: 61 ARERPGAIFHLAAVLSA-RGESDPQLTYDVNQTGTYNLLEGARIHGVSRFIFPSTIAVYG 119 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P + P +P +YG +K+AGE Y Y Sbjct: 120 PGLPDPTPDDVPLHPTTMYGVTKVAGELLCEYYRRRY 156 >gi|61806141|ref|YP_214501.1| nucleotide sugar epimerase [Prochlorococcus phage P-SSM2] gi|61374650|gb|AAX44647.1| nucleotide sugar epimerase [Prochlorococcus phage P-SSM2] gi|265525353|gb|ACY76150.1| nucleotide-sugar epimerase [Prochlorococcus phage P-SSM2] Length = 301 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D + + AA + + A D P A N G + + A G+ S+ G + P Sbjct: 70 DYVFHLAAESRIQSAIDNPIQAVQRNCVGTATVLQCAREAGVKRFVYSSTSSGYGNNPFP 129 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS 156 E P + LN Y +K+AGE+ YTN Y V+LR +++FG Sbjct: 130 NVETQPDDCLNPYSATKVAGEKLCKMYTNLYGLETVVLR---YFNVFGQ 175 >gi|326474041|gb|EGD98050.1| UDP-glucose 4-epimerase [Trichophyton tonsurans CBS 112818] Length = 374 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDKVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTNN 141 K+A E + N+ Sbjct: 160 KVAIESAITDMVNS 173 >gi|220919522|ref|YP_002494826.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957376|gb|ACL67760.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter dehalogenans 2CP-1] Length = 336 Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A F + DV+++ AA + VD++ P + N G + +AA G+ +++STD Sbjct: 67 AEIFRTERIDVVMHLAAESHVDRSILAPAVFIDTNVRGTQVLLEAARQHGVKRFLHVSTD 126 Query: 102 YVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L T E +P +P + Y SK + + +Y + + Sbjct: 127 EVYGSLGPTGYFTETTPLDPSSPYSASKASSDLLALAYAHTF 168 >gi|304405207|ref|ZP_07386867.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] gi|304346086|gb|EFM11920.1| dTDP-glucose 4,6-dehydratase [Paenibacillus curdlanolyticus YK9] Length = 339 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV++N AA + VD++ +P + N G + AA + GI + ISTD V+ L T Sbjct: 76 DVLVNFAAESHVDRSITDPGVFVRTNVIGTQVLLDAARTKGISKYVQISTDEVYGSLGET 135 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V +Y Y Sbjct: 136 GYFTEETPLAPNSPYSASKAGADLLVKAYHETY 168 >gi|291527358|emb|CBK92944.1| dTDP-glucose 4,6-dehydratase [Eubacterium rectale M104/1] Length = 339 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + P++ N G + A GI + +STD Sbjct: 68 KLFEEEHPDMVVNFAAESHVDRSIENPQVFLDTNIIGTSVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK A + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFHEDTPIHTSSPYSSSKAAADLLVLAYHRTY 171 >gi|330944902|gb|EGH46734.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 193 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE +P P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLAMEYMASLWQTKLPIVIARPFNYTGVGQAENFLL 178 >gi|157827241|ref|YP_001496305.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii OSU 85-389] gi|157802545|gb|ABV79268.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii OSU 85-389] Length = 284 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ +D+++ R P++D+ Sbjct: 1 MKILILGATGMLGNSMVRFLSTDKDLDVYATSRSSSAHSYFSKDLANKIVPNVDVENYDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 P+++IN ++P A IN+ +A + +G I+ISTD Sbjct: 61 LVEVLNKIKPNIVINCIGLVKQLADANDPLKALPINSLLPHRLAGLCELVGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G + E + ++YG+SK GE Sbjct: 121 CVFSG-KKGNYKESDFPDCYDLYGRSKFLGE 150 >gi|15895462|ref|NP_348811.1| nucleoside-diphosphate sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|15025189|gb|AAK80151.1|AE007719_8 Predicted nucleoside-diphosphate sugar epimerase [Clostridium acetobutylicum ATCC 824] gi|325509609|gb|ADZ21245.1| nucleoside-diphosphate sugar epimerase [Clostridium acetobutylicum EA 2018] Length = 340 Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 19/108 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 DV+ N AA V E PE A N G + KAA + C ++ S+D Sbjct: 79 DVVFNLAAMKHVPACEYNPEEAIRTNITGMENVIKAATYHNVECVVFTSSD--------- 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV--ASYTNNYVILRTAWVYSIFGS 156 NP N YG +KL E+ V A+Y+ V RT +V FG+ Sbjct: 130 -----KAINPTNSYGATKLLAEKLVQAANYSKGNV--RTKFVAVRFGN 170 >gi|315052558|ref|XP_003175653.1| GAL10 [Arthroderma gypseum CBS 118893] gi|311340968|gb|EFR00171.1| GAL10 [Arthroderma gypseum CBS 118893] Length = 374 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDKVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVSNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTNN 141 K+A E + N+ Sbjct: 160 KVAIESAITDMVNS 173 >gi|225352523|ref|ZP_03743546.1| hypothetical protein BIFPSEUDO_04146 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156717|gb|EEG70111.1| hypothetical protein BIFPSEUDO_04146 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 340 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIADPEPFLKTNVEGTFRLLEAVRRYGIRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y I T Sbjct: 141 PAKFTERTPYHPSSPYSSTKAASDMLVRAWTRTYGIRAT 179 >gi|170078322|ref|YP_001734960.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7002] gi|169885991|gb|ACA99704.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7002] Length = 330 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 1/109 (0%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 F D +++ AAY V ++ P + N G + +A + G+ ++ ST Sbjct: 65 QIFADHKIDAVMHFAAYAYVGESVTAPGKYYRNNVVGTLTLLEAMVAAGVKQFVFSSTCA 124 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + S PI E P NP+N YG SKL E+ + + Y + + Y Sbjct: 125 TYGEPSEIPIPEAHPQNPINPYGMSKLMVEKMLWDFDRAYGLRSVMFRY 173 >gi|238759808|ref|ZP_04620965.1| dTDP-glucose 4,6-dehydratase [Yersinia aldovae ATCC 35236] gi|238701951|gb|EEP94511.1| dTDP-glucose 4,6-dehydratase [Yersinia aldovae ATCC 35236] Length = 339 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD---- 89 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 42 VDICDRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYTMLEAARHYWQ 101 Query: 90 ------SIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 102 QLRAEAKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRT 161 Query: 142 Y 142 Y Sbjct: 162 Y 162 >gi|237736272|ref|ZP_04566753.1| UDP-N-acetylglucosamine 4,6-dehydratase [Fusobacterium mortiferum ATCC 9817] gi|229421620|gb|EEO36667.1| UDP-N-acetylglucosamine 4,6-dehydratase [Fusobacterium mortiferum ATCC 9817] Length = 625 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 22/109 (20%) Query: 32 PDIDL------LKPKDFASF-FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 P++DL ++ ++ F F + P+V+ + AA+ V E PE A N G + Sbjct: 348 PNLDLVSEICNIREEEKVDFLFNKYRPNVVFHAAAHKHVPLMEHNPEEAIKNNIFGTKKV 407 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 A+ AD G+ + ISTD NP N+ G SK A E Sbjct: 408 AECADKYGVERMVLISTD--------------KAVNPTNLMGASKRACE 442 >gi|332711220|ref|ZP_08431153.1| UDP-galactose 4-epimerase [Lyngbya majuscula 3L] gi|332350034|gb|EGJ29641.1| UDP-galactose 4-epimerase [Lyngbya majuscula 3L] Length = 336 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + F + +++ AAY V ++ +P + N G + +A + I + S+ Sbjct: 60 NLFRDYDISAVMHFAAYAYVGESVTDPAKYYRNNVTGTLTLLEAMVAASIKKLVFSSTCA 119 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 G+ +T PI E P NP+N YG SKL E ++ + Y + + Y Sbjct: 120 TYGVPKTVPIPEDHPQNPINPYGASKLMVERILSDFHTAYDLKSVTFRY 168 >gi|330975538|gb|EGH75604.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 298 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE +P P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLAMEYMASLWHARLPIVIARPFNYTGVGQAENFLL 178 >gi|327299430|ref|XP_003234408.1| UDP-glucose 4-epimerase [Trichophyton rubrum CBS 118892] gi|326463302|gb|EGD88755.1| UDP-glucose 4-epimerase [Trichophyton rubrum CBS 118892] Length = 374 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 9/134 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDKVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTNN 141 K+A E + N+ Sbjct: 160 KVAIESAITDMVNS 173 >gi|301307943|ref|ZP_07213898.1| polysaccharide biosynthesis protein [Bacteroides sp. 20_3] gi|300834084|gb|EFK64699.1| polysaccharide biosynthesis protein [Bacteroides sp. 20_3] Length = 637 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 27/149 (18%) Query: 21 VQDVEIIRV-GRPDI-------DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 + DV ++ G PDI D+ + F PD + + AAY V ED PE Sbjct: 334 LHDVRLMMARGWPDIESYTVVSDICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEE 393 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + N +G IA A G + +STD NP N+ G SK Sbjct: 394 SVRNNVDGTRVIADLAVKYGTRKFVMVSTD--------------KAVNPTNVMGCSKRIC 439 Query: 132 EEKVASY----TNNYVILRTAWVYSIFGS 156 E V S + V RT +V + FG+ Sbjct: 440 EIYVQSLDQAIKDGKVSGRTQFVTTRFGN 468 >gi|220921183|ref|YP_002496484.1| UDP-glucose 4-epimerase [Methylobacterium nodulans ORS 2060] gi|219945789|gb|ACL56181.1| UDP-glucose 4-epimerase [Methylobacterium nodulans ORS 2060] Length = 330 Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D I + AA V + +P + N + A+ +AA G+ I+ ST V+ ++ Sbjct: 69 DAIAHFAAKIVVPDSVSDPLGYYLNNTVKSRALIEAAVREGVRHVIFSSTAAVYGEPAQV 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 P+ E PTNP+N YG+SKL E +A ++ YV LR Sbjct: 129 PVPEDLPTNPINPYGRSKLMTEWMLADAAKAHGLTYVALR 168 >gi|332876948|ref|ZP_08444701.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685056|gb|EGJ57900.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 331 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 8/116 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----D 89 D+ + F + D +I+ AA + VD++ ++P I N G ++ +AA D Sbjct: 61 DICDYERMKELFKKYHIDGVIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKD 120 Query: 90 SI-GIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ G ++STD V+ L T E +P +P + Y SK + + V +Y N Y Sbjct: 121 NMQGKRFYHVSTDEVYGALEMDNTLFTEETPYDPQSPYSASKASSDHFVRAYHNTY 176 >gi|329766699|ref|ZP_08258242.1| polysaccharide biosynthesis protein CapD [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136954|gb|EGG41247.1| polysaccharide biosynthesis protein CapD [Candidatus Nitrosoarchaeum limnia SFB1] Length = 335 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 15/83 (18%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D+I + AA VD+ E P AF++N G + KAA + + I ISTD Sbjct: 78 DIIFHAAALKHVDRCELNPFEAFTVNIVGTNNVVKAAVNENVKKVISISTD--------- 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 NP+ + G +KL GE+ Sbjct: 129 -----KAVNPIGVMGATKLLGEK 146 >gi|302870780|ref|YP_003839416.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302573639|gb|ADL41430.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 316 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 2/110 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D++ F ++ D +IN AA + VD++ +P+I N G + + GI Sbjct: 59 DIVDRAKVEEVFKNYQIDYVINFAAESHVDRSIKDPDIFVKTNVLGTQVLLDVSRKFGIK 118 Query: 94 PCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I ISTD V+ L E SP P + Y SK + V +Y Y Sbjct: 119 KFIQISTDEVYGSLGPEGYFTEESPLAPNSPYSASKAGADMLVRAYFKTY 168 >gi|297625069|ref|YP_003706503.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297166249|gb|ADI15960.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 305 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 19/197 (9%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD I + A T + E AF ++N G + +AA + + + + YV+ G Sbjct: 61 LQPDEIYHLAGVT---RPASEGAAAFYAVNLGGTLNVLEAAREVRAAVLVVGSAYVY-GA 116 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSML 163 R P+ E +P P+N YG SK + E Y + + + A ++ G +FLL L Sbjct: 117 QRGPLSERAPLQPVNHYGASKASAELAALPYALSGMRVVRARPFNHVGPGQSPDFLLPTL 176 Query: 164 -----RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 R+ R E + + R I++ L+ D G++++ A G Sbjct: 177 VQQLARIEAGRAEPVIKLGNLDAVRDFTDV-RDIVRAYPKLLHEGDNG--GVYNL-ASGR 232 Query: 219 PVSWADFAEYIFWESAE 235 VS + AE + E AE Sbjct: 233 GVSVRELAELVL-ERAE 248 >gi|289678454|ref|ZP_06499344.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae FF5] gi|330899798|gb|EGH31217.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 298 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE +P P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLAMEYMASLWHARLPIVIARPFNYTGVGQAENFLL 178 >gi|268316875|ref|YP_003290594.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] gi|262334409|gb|ACY48206.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] Length = 310 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 20/113 (17%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---------CIYISTDYV 103 ++I+ AA V ++ +P+ +N G + +A G+ IY DYV Sbjct: 69 ILIHHAAQMDVRRSVADPKFDADVNIMGLLNLMEAGRQHGLQKVIFASTGGAIYGEPDYV 128 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYS 152 P DE P PL+ YG +KLA E+ + Y YV LR A VY Sbjct: 129 -------PQDEDHPVRPLSPYGITKLASEKYLYFYEQQYGIPYVALRYANVYG 174 >gi|15615926|ref|NP_244230.1| spore coat polysaccharide synthesis (dTDP glucose 4, 6-dehydratase) [Bacillus halodurans C-125] gi|10175987|dbj|BAB07083.1| spore coat polysaccharide synthesis (dTDP glucose 4, 6-dehydratase) [Bacillus halodurans C-125] Length = 321 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFD--GLS 108 DVI++ AA T VD++ P + N G + A +YISTD V+ G+ Sbjct: 77 DVIVHFAAETHVDRSIHNPMVFLETNILGTHNLLLAVLKGYAKKILYISTDEVYGSLGMK 136 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E SP N Y SK G+ S+ Y Sbjct: 137 DVPFTEQSPLAANNPYSASKAGGDLLARSFYKTY 170 >gi|332522914|ref|ZP_08399166.1| UDP-glucose 4-epimerase [Streptococcus porcinus str. Jelinkova 176] gi|332314178|gb|EGJ27163.1| UDP-glucose 4-epimerase [Streptococcus porcinus str. Jelinkova 176] Length = 332 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AAY+ V ++ +P F N G + + G+ I S+ G+ Sbjct: 70 DAVIHFAAYSLVGESMTDPLKYFDNNTVGMVKLLEVMAECGVKKIVFSSTAATYGIPEEI 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E S NP+N YG+SKL E+ + +Y ++V LR Sbjct: 130 PIKETSLQNPINPYGESKLMMEKIMDWCDQAYGIHFVALR 169 >gi|288963141|ref|YP_003453420.1| NAD-dependent epimerase/dehydratase [Azospirillum sp. B510] gi|288915393|dbj|BAI76876.1| NAD-dependent epimerase/dehydratase [Azospirillum sp. B510] Length = 321 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 19/149 (12%) Query: 1 MKCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFL 47 M+ +VIG++G ++ Q+L + V R PD DL KP+D L Sbjct: 1 MRHIVIGSSGFVGQRLVQALRAAGKPVVAFSRAPAPDGGDAGLFVAGDLRKPEDLDR--L 58 Query: 48 SFSPDVIINPAAYTAVDKA---EDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 PD +++ A D ++N G + A + G+ ++ STD Sbjct: 59 GMRPDDVVHHLAARHFGNGVPRHDRDAWFDAVNVGGTRTLLAAMRAAGVRKMVFFSTDMT 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + R P+ +PL YG+SKL E Sbjct: 119 YGLPQRLPVTPDHSQHPLGPYGRSKLEAE 147 >gi|260892182|ref|YP_003238279.1| dTDP-glucose 4,6-dehydratase [Ammonifex degensii KC4] gi|260864323|gb|ACX51429.1| dTDP-glucose 4,6-dehydratase [Ammonifex degensii KC4] Length = 327 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 D ++N AA T VD++ + N EG + +AA IP + +STD V+ L Sbjct: 75 DAVVNFAAETHVDRSIADSSPFVRTNVEGVRVLLEAARRHKIPLFLQVSTDEVYGSLREE 134 Query: 111 --PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E SP P + Y SK A + +Y Y Sbjct: 135 DPPFTESSPLLPNSPYAASKAAADLLCRAYHRTY 168 >gi|226949379|ref|YP_002804470.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|226843033|gb|ACO85699.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 307 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P +N G I + + +Y S+ V+ PIDE Sbjct: 76 IDVQKSITNPIFDSDVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPGYLPIDEKHGIR 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRLFSNLNNLDFTILRYANVYGI 173 >gi|159029030|emb|CAO90016.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 326 Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 6/105 (5%) Query: 70 PEIAF-SINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKS 127 PE AF +N +G + K + G+ I++S+ + S ++E SP +P + YG+S Sbjct: 85 PEAAFIKVNTKGTINLVKQSLKAGVKHFIFVSSIHAMAAESDDILNENSPCHPDSPYGRS 144 Query: 128 KLAGEE---KVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKE 168 KL E+ ++A +N + ILR VY + + +++L K Sbjct: 145 KLQAEQALIQLAKDSNMTWTILRPTLVYGLGNRANMERLMKLIKR 189 >gi|78486028|ref|YP_391953.1| NAD-dependent epimerase/dehydratase [Thiomicrospira crunogena XCL-2] gi|78364314|gb|ABB42279.1| NAD-dependent epimerase/dehydratase family protein [Thiomicrospira crunogena XCL-2] Length = 309 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%) Query: 43 ASFFLSFSPDVIINPAA-YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 + F S DV+I+ A Y D + E+ S N I +A GI +I+T Sbjct: 61 SEVFESEKIDVVIHMATLYRKFDNGNEVSEMLAS-NVTFPTEILEAGARNGIKG-FINTG 118 Query: 102 YVFD-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 F+ SR P+DE +P P N Y K+KLA E + ++++ +++ T ++S +G Sbjct: 119 TFFEYDCSRQPVDENAPIVPFNFYAKTKLAFETVLKTHSDT-MMVNTFRLFSPYGEK 174 >gi|237786451|ref|YP_002907156.1| dTDP-glucose-4,6-dehydratase [Corynebacterium kroppenstedtii DSM 44385] gi|237759363|gb|ACR18613.1| dTDP-glucose-4,6-dehydratase [Corynebacterium kroppenstedtii DSM 44385] Length = 352 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-- 107 S D +++ AA + D + EP N EG +A A +P +ISTD VF L Sbjct: 84 SADQVVHFAAESHNDNSLREPAPFLRTNIEGTVTVASACVKYDVPLHHISTDEVFGDLPI 143 Query: 108 -SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S E SP P + Y SK + + V ++ ++ Sbjct: 144 GSDERFTESSPYRPSSPYSASKASADHIVRAWVRSF 179 >gi|224826611|ref|ZP_03699712.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] gi|224601212|gb|EEG07394.1| dTDP-glucose 4,6-dehydratase [Lutiella nitroferrum 2002] Length = 353 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 17/131 (12%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 VE++R D LL+ P I+N AA + VD++ P + N +G Sbjct: 51 VELVRGDIGDAALLE-----RLLAEHRPRAILNFAAESHVDRSIHGPAVFVETNIDGTFR 105 Query: 84 IAKA----------ADSIGIPCIYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAG 131 + +A D +++STD VF L P E +P P + Y SK A Sbjct: 106 LLQATTAYWSGLPDGDQAAFRFLHVSTDEVFGSLGEHDAPFCETTPYAPNSPYAASKAAS 165 Query: 132 EEKVASYTNNY 142 + V ++ + Y Sbjct: 166 DHLVRAWHHTY 176 >gi|114566248|ref|YP_753402.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337183|gb|ABI68031.1| nucleotide sugar epimerase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 323 Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 6/102 (5%) Query: 45 FFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F F PD +IN AA V + + P I + NA G + + G+ + ST Sbjct: 71 FIFKFHQPDAVINLAARAGVRYSMENPHIYMTTNAHGTLNLLELCKEFGVRKFVLASTSS 130 Query: 103 VFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYV 143 ++ G P E P N P++ Y SK A E + +YT +Y+ Sbjct: 131 LYAG-QEMPFKEELPVNTPISPYAASKKAAE--MMAYTYHYL 169 >gi|320160985|ref|YP_004174209.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] gi|319994838|dbj|BAJ63609.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] Length = 308 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 20/174 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---RVGRPD----------IDLLKPKDFAS 44 MK LV G G I + ++ DV ++ GR +D+ P + Sbjct: 1 MKILVTGGAGFIGSHVVDQFIEAGHDVVVVDNLSTGREKNLNPKARFYRVDIRDP-ELRK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD-Y 102 F P+V+ + AA V ++ +P +N G+ + + G+ IYIS+ Sbjct: 60 VFEIEKPEVVDHHAAQMNVRRSVADPLYDADVNVRGSVHLLELCREYGVRKIIYISSGGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 V+ P DE P PL YG +K A E + Y NY I T + Y +++G Sbjct: 120 VYGEPVYLPCDEEHPVRPLCPYGLTKYAFELYLYIYQQNYGIDYTVFRYPNVYG 173 >gi|258516021|ref|YP_003192243.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257779726|gb|ACV63620.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 313 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 22/152 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GR--------PDIDLL-----KPKD 41 M+CLV G G I +L + + +RV G+ +IDL+ + D Sbjct: 1 MRCLVTGGAGFIGSNLVHTLINEGYKVRVLDNFSTGKFENIETVIKNIDLIVGDLCREDD 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 D++ + AA +V ++ +P +N EG + AA G+ +Y S+ Sbjct: 61 VRRAVKGV--DIVFHQAALPSVPRSVADPYTTNRVNIEGTLNVFLAARDSGVKRVVYASS 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 V+ + P +E T P++ Y SKLA E Sbjct: 119 SSVYGSNEKLPKEETMLTRPMSPYAASKLAKE 150 >gi|167755095|ref|ZP_02427222.1| hypothetical protein CLORAM_00599 [Clostridium ramosum DSM 1402] gi|237733478|ref|ZP_04563959.1| dTDP-glucose 4,6-dehydratase [Mollicutes bacterium D7] gi|167705145|gb|EDS19724.1| hypothetical protein CLORAM_00599 [Clostridium ramosum DSM 1402] gi|229383513|gb|EEO33604.1| dTDP-glucose 4,6-dehydratase [Coprobacillus sp. D7] Length = 341 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DV++N AA + VD++ +PEI N G + AA G+ + +STD V+ L Sbjct: 76 DVVVNFAAESHVDRSITDPEIFVKTNVMGTTTLLDAAKEFGVKRYHQVSTDEVYGDL--- 132 Query: 111 PIDE----FSPTNPLN 122 P+D F+ T PL+ Sbjct: 133 PLDRPDLFFTETTPLH 148 >gi|55742073|ref|NP_001006762.1| UDP-galactose-4-epimerase [Xenopus (Silurana) tropicalis] gi|49522496|gb|AAH75546.1| galactose-4-epimerase, UDP- [Xenopus (Silurana) tropicalis] Length = 348 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQD+ + ++D+L F +++ A AV ++ ++P + + +N G Sbjct: 52 VQDIVGKTIEFEEVDMLDHAALDKLFSKHKFSAVLHFAGLKAVGESVEKPLLYYKVNLTG 111 Query: 81 AGAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKV 135 + + +S G+ I + S+ V+ S PIDE P TNP YGK+K EE + Sbjct: 112 TIQLLEVMNSHGVKNIVFSSSATVYGDPSYLPIDESHPVGGCTNP---YGKTKYFIEEMI 168 >gi|20090040|ref|NP_616115.1| GDP-mannose 4,6-dehydratase [Methanosarcina acetivorans C2A] gi|19915010|gb|AAM04595.1| GDP-mannose 4,6-dehydratase [Methanosarcina acetivorans C2A] Length = 340 Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI----PCIYISTDYVFDG 106 PD I N AA + V + D PE INA G + +A ++G+ ST +F Sbjct: 74 PDEIYNLAAQSNVQTSFDRPEYTAEINALGTLRLLEAIRTLGLKKKTKFFQASTGDLFGN 133 Query: 107 LSRTPIDEFSPTNPLNIYGKSKL 129 P +E +P +P N Y SKL Sbjct: 134 SLEIPQNENTPFHPRNPYAVSKL 156 >gi|262383305|ref|ZP_06076441.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294203|gb|EEY82135.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 643 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 360 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 419 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 420 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 451 >gi|225684294|gb|EEH22578.1| UDP-glucose 4-epimerase [Paracoccidioides brasiliensis Pb03] Length = 374 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP+ D+ K DF F PD+ +I+ AA AV ++ ++P Sbjct: 40 SEEVINRIELICGKRPEFAKADVTKEADFDRVFEQH-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYHVNVCGSICLLRSMKRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K+A E + N Sbjct: 159 TKVAVETAITDMIN 172 >gi|124485659|ref|YP_001030275.1| hypothetical protein Mlab_0837 [Methanocorpusculum labreanum Z] gi|124363200|gb|ABN07008.1| NAD-dependent epimerase/dehydratase [Methanocorpusculum labreanum Z] Length = 308 Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Query: 96 IYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ S P E +SP P++IYG SKLA E ++SY Y AWVY Sbjct: 113 VFTSTSTVYGEASVIPTPETYSPMIPISIYGASKLACEAMISSYAATYG--WKAWVY 167 >gi|298490027|ref|YP_003720204.1| dTDP-glucose 4,6-dehydratase ['Nostoc azollae' 0708] gi|298231945|gb|ADI63081.1| dTDP-glucose 4,6-dehydratase ['Nostoc azollae' 0708] Length = 362 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 13/115 (11%) Query: 41 DFASFFLS-FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-------- 91 + S+ L + PD IIN AA T VD++ P N G + +A+ + Sbjct: 72 ELLSYLLEKYQPDAIINFAAETHVDRSIISPHNFIQTNIVGTFELLEASKAYWQKLTSPK 131 Query: 92 --GIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ISTD V+ LS T E +P P + Y SK A + V SY + Y Sbjct: 132 KEKFRFLHISTDEVYGSLSSTDPAFREDTPYAPNSPYSASKAAADHLVRSYYHTY 186 >gi|89056334|ref|YP_511785.1| dTDP-glucose 4,6-dehydratase [Jannaschia sp. CCS1] gi|88865883|gb|ABD56760.1| dTDP-glucose 4,6-dehydratase [Jannaschia sp. CCS1] Length = 346 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + + +PD I++ AA + VD++ D P N G + +AA + Sbjct: 57 DICDREAMDTILSRHTPDAILHLAAESHVDRSIDGPGAFIQTNITGTYTLLEAARTYWEA 116 Query: 92 -----GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G ++STD VF L T + E SP P + Y SK A + V ++ Y Sbjct: 117 NGRPDGFRFHHVSTDEVFGTLGDTGLFTEDSPYAPNSPYSASKAASDHMVRAWAETY 173 >gi|190893074|ref|YP_001979616.1| UDP-glucuronic acid epimerase [Rhizobium etli CIAT 652] gi|190698353|gb|ACE92438.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CIAT 652] Length = 338 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 3/112 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFD 105 L+ +PD++I+ AA V + + PE N EG+ I + A + + + + ST ++ Sbjct: 73 LTATPDILIHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYG 132 Query: 106 GLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 + P E + PL IY +K + E SY + + I TA+ ++++G Sbjct: 133 ANATVPFRETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYG 184 >gi|91793995|ref|YP_563646.1| UDP-glucose 4-epimerase [Shewanella denitrificans OS217] gi|91715997|gb|ABE55923.1| UDP-galactose 4-epimerase [Shewanella denitrificans OS217] Length = 336 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 7/143 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKPKDFASFFLSFSPDVI 54 ++ L +G + IA +LS+ ++ + + +V D+L F S D + Sbjct: 18 LEMLAVGLDIIIADNLSNSSLESIRRVESIAAKKVTFCQGDILDKTFLRDIFKRHSIDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 ++ A AV ++ ++P + N G + + G+ ++ S+ V+ S PI Sbjct: 78 VHFAGLKAVGESVEQPLRYYENNVTGTLYLCQVMAEFGVKNLVFSSSATVYGDPSALPIT 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVA 136 E PT+ N YG+SKL E +A Sbjct: 138 EDFPTSATNPYGQSKLMVELMLA 160 >gi|88813322|ref|ZP_01128560.1| dTDP-glucose 4,6-dehydratase [Nitrococcus mobilis Nb-231] gi|88789380|gb|EAR20509.1| dTDP-glucose 4,6-dehydratase [Nitrococcus mobilis Nb-231] Length = 362 Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 67/176 (38%), Gaps = 34/176 (19%) Query: 1 MKCLVIGNNGQIAQSL-------SSMCVQDVE-IIRVGRPDI---------------DLL 37 MK L+ G G I +L + CV +V+ + G P D+ Sbjct: 1 MKILITGGAGFIGSALVRYLIGETEHCVVNVDALTYAGDPSTVASVAQDPRYRFYHTDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI- 96 + F S PD +++ AA + VD++ D P N G + +AA + Sbjct: 61 DAAALRALFASEKPDAVMHLAAESHVDRSIDGPAEFIRTNIHGTYCLLEAARAYWTELAP 120 Query: 97 ---------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L E SP P + Y SK + + V ++ + Y Sbjct: 121 TEQERFRFHHISTDEVFGALGANGCFTEASPYRPNSPYAASKASSDHLVRAWCHTY 176 >gi|315650485|ref|ZP_07903555.1| dTDP-glucose 4,6-dehydratase [Eubacterium saburreum DSM 3986] gi|315487281|gb|EFU77593.1| dTDP-glucose 4,6-dehydratase [Eubacterium saburreum DSM 3986] Length = 340 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 11/107 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV+IN AA + VD++ +PE N G + A + GI + +STD Sbjct: 68 KLFEEEKPDVVINFAAESHVDRSITDPESFVRTNVMGTTTLLDACRTYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 V+ L P+D F+ PL+ Y SK + V +Y Y Sbjct: 128 VYGDL---PLDRPDLFFTEETPLHTSSPYSSSKAGADLFVLAYHRTY 171 >gi|304405550|ref|ZP_07387209.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] gi|304345589|gb|EFM11424.1| NAD-dependent epimerase/dehydratase [Paenibacillus curdlanolyticus YK9] Length = 303 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 25/171 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI----------------DLLKPKDFA 43 M CLV+G G I + L ++ +R+ GR I D L+ DF+ Sbjct: 1 MNCLVLGGTGFIGKHLCKRLAEENHNVRILGRKKIEFDNIFYDNKFEFVQQDFLQIDDFS 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + D++ + + T +E + S N + KA + I ++IS+ Sbjct: 61 NLLDGI--DIVFHLISTTIPSTSEIDCVFDISSNVISTLKLLKACVKMKIKKIVFISSGG 118 Query: 103 VFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTA 148 G+ + PI E PTNP+ YG KL E + Y +Y ILR + Sbjct: 119 TVYGIPVQLPIPEEHPTNPICSYGIQKLTIENYLYYYFMQYGLDYTILRLS 169 >gi|295693598|ref|YP_003602208.1| dtdp-glucose 4,6-dehydratase [Lactobacillus crispatus ST1] gi|295031704|emb|CBL51183.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus ST1] Length = 345 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDICDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|317484678|ref|ZP_07943579.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] gi|316924034|gb|EFV45219.1| NAD dependent epimerase/dehydratase [Bilophila wadsworthia 3_1_6] Length = 326 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYISTDYVFDGLSR 109 D + N A T+ + +P IN + +I +A + GI ++ T ++ Sbjct: 78 DFLFNLAGQTSHMDSMADPYTDLDINCKAQLSILEACRNANPGIRIVFAGTRQIYGKPDY 137 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 P+DE P P+++ G +K+AGE Y N Y I Sbjct: 138 LPVDEKHPVRPVDVNGINKMAGEWYHILYNNVYGI 172 >gi|256839016|ref|ZP_05544526.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739935|gb|EEU53259.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 644 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 361 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 420 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 421 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 452 >gi|182416971|ref|ZP_02948351.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum 5521] gi|237666254|ref|ZP_04526241.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379147|gb|EDT76649.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum 5521] gi|237658344|gb|EEP55897.1| dTDP-glucose 4,6-dehydratase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 339 Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ F PD+++N AA + VD++ ++PEI N G + A GI Sbjct: 58 IDIADRNAVYEMFEKEIPDIVVNFAAESHVDRSIEDPEIFLKTNIMGTQVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|209447530|pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus gi|209447531|pdb|3EHE|B Chain B, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ P E PT+P+++YG SKLA E + SY + + + AW+Y Sbjct: 110 VFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM--QAWIY 163 >gi|298374568|ref|ZP_06984526.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] gi|298268936|gb|EFI10591.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] Length = 644 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 361 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 420 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 421 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 452 >gi|288921329|ref|ZP_06415611.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] gi|288347303|gb|EFC81598.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f] Length = 341 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 14/135 (10%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P++ + +N +G+ +AK A G+ +Y+S+ V+ + + + E SP NP Y + K Sbjct: 85 PDVTYKVNHQGSVQLAKLAKQAGVERFVYMSSCSVYGVATGSDVTETSPVNPQTPYAECK 144 Query: 129 LAGEEKVASYTNNY---VILRTAWVYS----IFGSNFLLSMLRLAKERREISVVCDQFGT 181 + E VA ++ +R A Y + L ++ +A EI++ D GT Sbjct: 145 VLVERDVAPLADDTFSPTFMRNATAYGASPRMRFDIVLNNLAGVAWTTGEIAMTSD--GT 202 Query: 182 P----TSALQIARAI 192 P L IA+AI Sbjct: 203 PWRPLVHGLDIAKAI 217 >gi|159046644|ref|YP_001542313.1| dTDP-glucose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] gi|157914403|gb|ABV95832.1| dTDP-glucose 4,6-dehydratase [Dinoroseobacter shibae DFL 12] Length = 346 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 9/118 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--- 90 +D+ F + +PD +++ AA + VD++ D P N G + +AA S Sbjct: 56 VDIRDRAALDRVFATHAPDAVMHLAAESHVDRSIDGPGDFIETNITGTYNMLEAARSHWV 115 Query: 91 -IGIP----CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G P +ISTD VF L T E +P +P + Y SK A + V ++ Y Sbjct: 116 GQGRPEDFRFHHISTDEVFGSLGPTGQFTEETPYDPRSPYSASKAASDHLVRAWHETY 173 >gi|150019231|ref|YP_001311485.1| UDP-glucose 4-epimerase [Clostridium beijerinckii NCIMB 8052] gi|149905696|gb|ABR36529.1| UDP-glucose 4-epimerase [Clostridium beijerinckii NCIMB 8052] Length = 330 Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLS- 48 M LV G G I + ++ + Q+ ++I V P K S FL Sbjct: 1 MSILVCGGAGYIGSHTVHELVKQNKDVIIVDNLQSGHMKAVNPKAKFYKGDIRDSEFLDK 60 Query: 49 -FSP---DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 FS D II+ AA + V ++ +P + F+ N G + ++ I I + ST V Sbjct: 61 VFSENKIDAIIHFAANSLVGESMVKPLLYFNNNVYGMQILLESMVKHDIKNIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVASYTN--NYVILR 146 + + PI E TNP N YG++KL E+ K S N NYV LR Sbjct: 121 YGEPKKIPISEDDETNPTNTYGETKLTMEKMMKWVSKANGINYVSLR 167 >gi|297625077|ref|YP_003706511.1| dTDP-glucose 4,6-dehydratase [Truepera radiovictrix DSM 17093] gi|297166257|gb|ADI15968.1| dTDP-glucose 4,6-dehydratase [Truepera radiovictrix DSM 17093] Length = 346 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 12/99 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADSIGIPCIYISTDYVF--- 104 D ++N AA T VD++ + N EG A+ +AA + +++STD V+ Sbjct: 84 DAVVNFAAETHVDRSIHDAAPFVHTNVEGVRVLLDAVREAARERPVRFVHVSTDEVYGEV 143 Query: 105 -DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +GLSR D F P +P Y SK G+ V +Y Y Sbjct: 144 LEGLSRED-DPFRPRSP---YSASKAGGDLLVGAYGVTY 178 >gi|315224468|ref|ZP_07866295.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea F0287] gi|314945489|gb|EFS97511.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea F0287] Length = 330 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 8/116 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----D 89 D+ + + F D II+ AA + VD++ ++P I N G ++ +AA D Sbjct: 61 DICDYERMKALFAEHHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKD 120 Query: 90 SI-GIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ G ++STD V+ L T E +P +P + Y SK + + V +Y N Y Sbjct: 121 NMQGKRFYHVSTDEVYGALEMDNTLFTEQTPYDPQSPYSASKASSDHFVRAYHNTY 176 >gi|313636385|gb|EFS02163.1| UDP-glucose 4-epimerase [Listeria seeligeri FSL S4-171] Length = 327 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 24/167 (14%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ KDF +S F + D +++ AA + V ++ +EP + N G + + + G+ Sbjct: 52 IRDKDFLSSVFDRETVDGVMHFAASSLVGESMEEPLQYLNNNVYGTQILLEVMEQFGVKN 111 Query: 96 IYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV 150 I S+ G + PI E TNP + YG +KL E+ + +Y YV LR Sbjct: 112 IVFSSSAATYGEPEQVPIIESMSTNPESTYGDTKLIMEKMMKWCDKAYGMKYVALR---Y 168 Query: 151 YSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G S+ + +L++A +RE +++ D + TP Sbjct: 169 FNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|301308241|ref|ZP_07214195.1| Cap5D [Bacteroides sp. 20_3] gi|300833711|gb|EFK64327.1| Cap5D [Bacteroides sp. 20_3] Length = 644 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 361 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 420 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 421 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 452 >gi|262382518|ref|ZP_06075655.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295396|gb|EEY83327.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 643 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 360 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 419 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 420 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 451 >gi|259908059|ref|YP_002648415.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|224963681|emb|CAX55178.1| DTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae Ep1/96] gi|283477957|emb|CAY73873.1| dTDP-glucose 4,6-dehydratase [Erwinia pyrifoliae DSM 12163] Length = 356 Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IG 92 D+ P+ F F PDV+++ AA + VD++ + P N G + +AA +G Sbjct: 58 DICDPESLNHAFNDFEPDVVMHLAAESHVDRSINGPAAFIETNIIGTYVLLEAARRYWLG 117 Query: 93 IPC--------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E + P + Y SK + + V ++ Y Sbjct: 118 LPVERKEAFRFHHISTDEVFGDLHGTDDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTY 177 >gi|294055192|ref|YP_003548850.1| polysaccharide biosynthesis protein CapD [Coraliomargarita akajimensis DSM 45221] gi|293614525|gb|ADE54680.1| polysaccharide biosynthesis protein CapD [Coraliomargarita akajimensis DSM 45221] Length = 620 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 47/188 (25%) Query: 2 KCLVIGNNGQIAQSL---------SSMCVQDVEIIRVGRPDIDLLKP------------- 39 + LV G G I L +C D I V + ++LKP Sbjct: 290 RVLVTGAGGSIGSELVVQILGYEPQELCCVDQAEIAVFKLREEVLKPTAGSVNWQSCVLD 349 Query: 40 -KDFAS---FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP- 94 D AS F SF P+V+ + AA+ V+ ED+P A N +A+ A + Sbjct: 350 ISDHASMEQLFESFKPEVVFHAAAHKHVNLMEDQPAEALKNNFIATANLARLASQAAVER 409 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV------ASYTNNYVILRTA 148 ++ISTD NP ++ G SK E + +S T ++ +R Sbjct: 410 FVFISTD--------------KAINPTSVMGASKRLAELSLLERQVESSNTTKFIAVRFG 455 Query: 149 WVYSIFGS 156 V GS Sbjct: 456 NVLGSSGS 463 >gi|260494949|ref|ZP_05815078.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_33] gi|260197392|gb|EEW94910.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. 3_1_33] Length = 213 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 18/171 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + + G N +I ++L E + + DID L F S +I+ AA + Sbjct: 26 QVVAFGRNKKIGKALID------ENVEFYKGDIDNLDD----LFKASQDCSAVIHAAALS 75 Query: 62 AV-DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---RTPIDEFSP 117 V K ED +++N G I + + + +++S+ ++ G DE Sbjct: 76 TVWGKWED----FYNVNVLGTKNIVQVCEEKNLKLVFVSSPSIYAGAKDQLNVKEDEAPK 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 N LN Y KSK+ E + S NY+I+R ++ + ++ + +L L K+ Sbjct: 132 ENDLNYYIKSKIMAENIIKSSKLNYMIIRPRGLFGVGDTSIIPRLLELNKK 182 >gi|218290279|ref|ZP_03494425.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218239634|gb|EED06826.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFD--GLS 108 DVI+N AA + VD++ +P N G + AA G+ + +STD V+ G Sbjct: 75 DVIVNFAAESHVDRSIMDPGAFVRTNVMGTQVLLDAARRHGVKKFVQVSTDEVYGTLGPD 134 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E +P +P + Y SK + V +Y Y Sbjct: 135 DAPFTETTPLHPNSPYSASKAGADLLVRAYHETY 168 >gi|163851458|ref|YP_001639501.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] gi|163663063|gb|ABY30430.1| NAD-dependent epimerase/dehydratase [Methylobacterium extorquens PA1] Length = 307 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 5/135 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL +P + A+ D +++ A E + S N E +A AA + Sbjct: 51 DLARPMNMAAALTGV--DAVVHSAGLAHAMSGAPEDDFRNS-NTEATRKLADAAQRARVG 107 Query: 95 -CIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 +++S+ G S P+ E P + YG+SKLA EE + ++V LR VY Sbjct: 108 RFVFLSSIRAQAGSSAPAPLSEADAPEPTDPYGRSKLAAEEALGETGLDWVALRPVLVYG 167 Query: 153 IFGSNFLLSMLRLAK 167 + ++L+LA+ Sbjct: 168 AGVKGNMAALLKLAR 182 >gi|21227264|ref|NP_633186.1| UDP-N-acetylglucosamine 4-epimerase [Methanosarcina mazei Go1] gi|20905612|gb|AAM30858.1| UDP-N-acetylglucosamine 4-epimerase [Methanosarcina mazei Go1] Length = 334 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V + ++P +N G + KA+ G+ I S+ V+ + Sbjct: 78 DYVYHEAAQAGVRISVEDPFKPNDVNVHGTLNVLKASLDAGVKKVINASSSSVYGKVKYL 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 P DE PT P++ YG SKLA E + Y + T+ Y +++G Sbjct: 138 PFDEQHPTEPVSPYGVSKLAAEHYCRVFYEVYGLPTTSLRYFTVYG 183 >gi|11497973|ref|NP_069197.1| UDP-glucose 4-epimerase (galE-1) [Archaeoglobus fulgidus DSM 4304] gi|2650268|gb|AAB90870.1| UDP-glucose 4-epimerase (galE-1) [Archaeoglobus fulgidus DSM 4304] Length = 305 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ P E PT+P+++YG SKLA E + SY + + + AW+Y Sbjct: 108 VFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM--QAWIY 161 >gi|88860058|ref|ZP_01134697.1| UDP-glucose-4-epimerase [Pseudoalteromonas tunicata D2] gi|88818052|gb|EAR27868.1| UDP-glucose-4-epimerase [Pseudoalteromonas tunicata D2] Length = 337 Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%) Query: 1 MKCLVIGNNGQIAQSLSS---MCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDVI 54 ++ L +G+ I +LS+ ++ +E I +P D+ + A F FS D + Sbjct: 18 VELLNLGHEVVIFDNLSNSNRAVLERIETITAKKPHFILGDIRDSQALAQVFNDFSIDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ A AV ++ P + N G+ + KA + + I+ S+ V+ R PID Sbjct: 78 IHFAGLKAVGESVAMPLSYYDNNVCGSLCLLKAMNDANVKKIIFSSSATVYGSPERLPID 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVA 136 E N YG +KL E+ ++ Sbjct: 138 EQCALRTTNPYGANKLQVEQMLS 160 >gi|150010192|ref|YP_001304935.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Parabacteroides distasonis ATCC 8503] gi|149938616|gb|ABR45313.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Parabacteroides distasonis ATCC 8503] Length = 644 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 361 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 420 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 421 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 452 >gi|301309355|ref|ZP_07215297.1| Cap5D [Bacteroides sp. 20_3] gi|300832444|gb|EFK63072.1| Cap5D [Bacteroides sp. 20_3] Length = 644 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ P V+ + AAY V E+ P A N G +A AA S G+ Sbjct: 361 DVRSPDRVDYVFRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVE 420 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + ISTD NP NI G SK E V S + Sbjct: 421 KFVMISTD--------------KAVNPTNIMGCSKRLAEIYVQSLS 452 >gi|260886316|ref|ZP_05897579.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|330839710|ref|YP_004414290.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|260864035|gb|EEX78535.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|329747474|gb|AEC00831.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 329 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 5/107 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + +A G+ ++ ST V Sbjct: 61 IFTENKVEAVIHFAANSLVGESMEKPLLYFNNNVYGMQVLLEAMVRHGVDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVASYTNN--YVILR 146 + R PI E T P N YG++KL E+ K S N YV LR Sbjct: 121 YGEPKRVPIHEDDETCPTNTYGETKLTMEKMMKWVSRANGVRYVSLR 167 >gi|220927823|ref|YP_002504732.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] gi|219998151|gb|ACL74752.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] Length = 337 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 6/119 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L + F++ PD +I+ A AV ++ P + N G + + + G+ Sbjct: 57 VDILDKEALEQVFINNQPDSVIHFAGLKAVGESVSIPLKYYHNNITGTLILCELMEKYGV 116 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILR 146 ++ S+ V+ + PI E P + N YG++KL EE VA + N +LR Sbjct: 117 KNLVFSSSATVYGDPASVPISEEFPLSVTNPYGRTKLMIEEILKDLHVADASWNIALLR 175 >gi|153876000|ref|ZP_02003541.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] gi|152067536|gb|EDN66459.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. PS] Length = 328 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K F + D +++ A++ V ++ P + N + A + G+ Sbjct: 53 DLGDSKGLDLLFTGYQFDGVMHFASFIQVGESVQIPSKYYQNNVAATLNLLDAMINHGVK 112 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ S+ +F P+DE P P+N YG SK E+ +A Y Y Sbjct: 113 TLIFSSSAAIFGEPQYVPLDEQHPKQPINPYGLSKWMVEQILADYNRAY 161 >gi|53712842|ref|YP_098834.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis YCH46] gi|52215707|dbj|BAD48300.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis YCH46] Length = 298 Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 8/144 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINP 57 M L G +G + ++ + II VG D D +F +F DV+ + Sbjct: 1 MTLLFTGASGFLGNNIIHLLNGTYNIISVGLSPQDTYLVDIATDIPTFTDAF--DVVFHA 58 Query: 58 AAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDE 114 A +V K E E + F +N +G + A + GIP I+IST V+ S I E Sbjct: 59 AGKAHSVPKTEAEKRLFFDVNLQGTKNLCTALERSGIPKAFIFISTVAVYGCDSGENITE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY 138 P N Y SK+ E+ + + Sbjct: 119 EHPLNGTTPYALSKIKAEKYLQGW 142 >gi|311033275|ref|ZP_07711365.1| caspsular polysaccharide biosynthesis protein [Bacillus sp. m3-13] Length = 611 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDY 102 S + PDV+ + AA+ V E PE A N G+ +A+AAD+ GI + +S+D Sbjct: 346 SIMEKYMPDVVYHAAAHKHVPLMERNPEEAVKNNIFGSKNVAEAADTFGIDTFVLVSSD- 404 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G +K E V +T +V FG+ Sbjct: 405 -------------KAVNPTNIMGSTKRFAEMVVQQLAQES---KTKFVAVRFGN 442 >gi|299131844|ref|ZP_07025039.1| UDP-glucose 4-epimerase [Afipia sp. 1NLS2] gi|298591981|gb|EFI52181.1| UDP-glucose 4-epimerase [Afipia sp. 1NLS2] Length = 345 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ + P+ E +PT PL+ YG SKL E + ++ NYV+LR Sbjct: 121 IFSSTAAVYGNPEQMPVPEIAPTRPLSPYGSSKLMTEIMLHDVATAHDLNYVVLR 175 >gi|261884126|ref|ZP_06008165.1| dTDP-4-dehydrorhamnose reductase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 193 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPT-----NPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 IY+STD +F +E PT NPL+ Y +KL GE+ + NN++I+RT Sbjct: 10 LIYVSTDGIFTNGGGYFSEEARPTYLETENPLSNYTNAKLDGEKFIQRKHNNHIIIRTGP 69 Query: 150 VY 151 +Y Sbjct: 70 LY 71 >gi|257052215|ref|YP_003130048.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690978|gb|ACV11315.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 328 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 D + + AA V ++ + P ++N +G + AA GI + +++ G Sbjct: 81 DYVYHEAAQAGVRRSVENPRKYDAVNVDGTLNVLDAAREHGIERVVVASSSSVYGKPISL 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 P DE PT P++ YG SKLA E +Y N Y + A Y +++G +M Sbjct: 141 PYDEEDPTMPVSPYGASKLAQERYTCAYANCYDLPAVALRYFTVYGPRMRPNM 193 >gi|209551430|ref|YP_002283347.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537186|gb|ACI57121.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 327 Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ P I++ AA Sbjct: 20 CLDLANKGYKPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKYIVEQALADY-DQYRSLRS 165 >gi|329766700|ref|ZP_08258243.1| Nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136955|gb|EGG41248.1| Nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 281 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 12/76 (15%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 IY+S+ YV+ P+DE P NP N Y +SK GE Y N N +ILR + Sbjct: 94 IYVSS-YVYGNPKYCPVDEKHPINPHNAYTESKYLGERLCEFYCNKSELNLIILRP---F 149 Query: 152 SIFGSN----FLLSML 163 +IFG + FL++ L Sbjct: 150 NIFGESMREGFLITNL 165 >gi|300710052|ref|YP_003735866.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] gi|299123735|gb|ADJ14074.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] Length = 296 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 14/187 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI + AA +V+++ EPE + ++N + ++ + A C+ S+ V+ + P Sbjct: 65 DVIFHEAASVSVERSVAEPEYSHAVNVDATLSLLETARKRDARCVLASSAAVYGEPASVP 124 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG--------SNFLLSM 162 I E P P + YG K + ++ Y Y + A Y +++G S + + Sbjct: 125 IPESEPLAPTSPYGIEKTSIDQYARVYNELYDLPTVALRYFNVYGPRQTAGDYSGVISTF 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L A+ I+V D GT T ++++ NL+ +T G + G V+ Sbjct: 185 LDQARANDPITVHGD--GTQTRDFVHVEDVVRV--NLLA-METDHVGEAYNVGTGDTVTI 239 Query: 223 ADFAEYI 229 A+ A + Sbjct: 240 AELARAV 246 >gi|289662495|ref|ZP_06484076.1| UDP-glucose 4-epimerase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 305 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%) Query: 69 EPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 EP + F+ N G A+ +A + + C ++ S+ V+ +R+PI+E +P +N YG+ Sbjct: 7 EPLLYFNNNVTGTLALLRAMRTAKV-CNLVFSSSATVYGDANRSPIEENAPLKAINPYGR 65 Query: 127 SKLAGEEKVASYT 139 +KL EE + + Sbjct: 66 TKLMMEEMIGDLS 78 >gi|269104501|ref|ZP_06157197.1| UDP-glucose 4-epimerase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161141|gb|EEZ39638.1| UDP-glucose 4-epimerase [Photobacterium damselae subsp. damselae CIP 102761] Length = 338 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 S F D +I+ A AV ++ ++P + N G + +A + G+ I+ S+ Sbjct: 67 SVFAENEIDAVIHFAGLKAVGESVEKPLEYYDNNVHGTLVLVEAMRAAGVNSLIFSSSAT 126 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ + PI E PT+ N YG+SKL EE + + Y Sbjct: 127 VYGDPASVPITEDFPTSATNPYGRSKLMVEECLTDIQHAY 166 >gi|167755682|ref|ZP_02427809.1| hypothetical protein CLORAM_01197 [Clostridium ramosum DSM 1402] gi|167704621|gb|EDS19200.1| hypothetical protein CLORAM_01197 [Clostridium ramosum DSM 1402] Length = 649 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 22/119 (18%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F + PD++ + AA+ V ED P A N G +A+AAD I ISTD Sbjct: 360 KLFEIYHPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTLNVARAADKYNAQKFILISTD- 418 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN 157 NP N+ G +K E V +Y YV +R ++ GSN Sbjct: 419 -------------KAVNPTNVMGATKRLCEMIVQTYNKRSQTEYVAVRFG---NVLGSN 461 >gi|86748137|ref|YP_484633.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris HaA2] gi|86571165|gb|ABD05722.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris HaA2] Length = 327 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Query: 41 DFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 DF + P II+ AA V ++ +P + N A + A IP ++ Sbjct: 58 DFVGDIMDRHPIAAIIHFAASVVVPESVAQPLAYYRNNTANARTLIDCAVQRRIPHVVFS 117 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ST V+ R PI E PT P+N YG+SKL E Sbjct: 118 STAAVYGEPDRNPIGEDQPTQPINPYGRSKLMVE 151 >gi|66044170|ref|YP_234011.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae B728a] gi|63254877|gb|AAY35973.1| NAD-dependent epimerase/dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 298 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE +P P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTPPAPANDYAVSKLAMEYMASLWHARLPIVIARPFNYTGVGQAENFLL 178 >gi|114565700|ref|YP_752854.1| hypothetical protein Swol_0128 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336635|gb|ABI67483.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 635 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 15/99 (15%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F + P VI + AA+ V E PE A + N G IA+ AD G Sbjct: 338 DVRNREKLQAVFEKYFPQVIFHAAAFKHVPMMEMHPEEALNNNVLGTRNIAEMADKYGSE 397 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 I ISTD NP N+ G SK E Sbjct: 398 TFILISTD--------------KAVNPTNVMGASKRIAE 422 >gi|255008354|ref|ZP_05280480.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis 3_1_12] gi|313146078|ref|ZP_07808271.1| NAD dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] gi|313134845|gb|EFR52205.1| NAD dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] Length = 298 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 8/144 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLK--PKDFASFFLSFSPDVIINP 57 M L G +G + ++ + II VG P + L D +F +F DV+ + Sbjct: 1 MTLLFTGASGFLGNNIIHLLNGTYNIISVGLSPQDNYLVDIATDIPTFTDAF--DVVFHA 58 Query: 58 AAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDE 114 A +V K E E + F +N +G + A + GIP I+IST V+ S I E Sbjct: 59 AGKAHSVPKTEAEKRLFFDVNLQGTKNLCTALERSGIPKAFIFISTVAVYGCDSGENITE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY 138 P N Y SK+ E+ + + Sbjct: 119 EHPLNGTTPYALSKIKAEKYLEGW 142 >gi|126735806|ref|ZP_01751551.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid [Roseobacter sp. CCS2] gi|126714993|gb|EBA11859.1| NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid [Roseobacter sp. CCS2] Length = 322 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 +AE + ++ IN G + +A I G+P I S+ V+ G + P+ E + P N Sbjct: 90 QAEADYDLGMKINLGGTNTVLEAVKEIRPGVPVIGTSSLAVYGGNPQEPLSEATQIQPQN 149 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWV 150 YG +K E +A Y R WV Sbjct: 150 TYGVTKAMAELVMADYR------RRGWV 171 >gi|219847074|ref|YP_002461507.1| UDP-glucose 4-epimerase [Chloroflexus aggregans DSM 9485] gi|219541333|gb|ACL23071.1| UDP-glucose 4-epimerase [Chloroflexus aggregans DSM 9485] Length = 328 Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 44/183 (24%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------------------DLLK 38 MK LV G G I S+ E+IR G I DL Sbjct: 1 MKILVTGGAGYIGSITSA------ELIRAGHEVIVIDNLYQGHRAAVPPEAVFIEADLAD 54 Query: 39 PKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 K + F ++ D I++ A+YT V ++ ++P + N A + +AA + G+ I Sbjct: 55 RKTLSEIFAAYPGIDGIMHFASYTLVGESMEKPFLYLRDNLTNAANLLEAAIAAGVRRFI 114 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-AWVYSIFG 155 ST +FD R PI E P + YG+SK + I RT W+ I+G Sbjct: 115 LSSTANLFDRPERIPIAEHERIVPGSPYGESK-------------FFIERTLHWMARIYG 161 Query: 156 SNF 158 + Sbjct: 162 MRY 164 >gi|257463741|ref|ZP_05628130.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] gi|317061285|ref|ZP_07925770.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] gi|313686961|gb|EFS23796.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] Length = 329 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F S D +I+ AA++ V ++ +EP F N G + KA + ++ ST + Sbjct: 62 FERHSIDGVIDFAAFSLVGESVEEPLKYFDNNVYGTLCLLKAMQKYKVNNIVFSSTAATY 121 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E T P N YG+SKL E+ + +Y Y +LR Sbjct: 122 GEPENIPILETDTTFPTNPYGESKLCVEKMLKWCDKAYGMKYTVLR 167 >gi|170754466|ref|YP_001781648.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] gi|169119678|gb|ACA43514.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum B1 str. Okra] Length = 307 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P ++N G I + + +Y S+ V+ PIDE Sbjct: 76 IDVQKSITNPIFDSNVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPGYLPIDEKHGIM 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRLFSNLNNLDFTILRYANVYGI 173 >gi|218885249|ref|YP_002434570.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756203|gb|ACL07102.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 340 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA T VD++ D+P N G + AA G+ +++STD V+ L Sbjct: 79 DAVVNFAAETHVDRSIDDPAPFVVTNVLGTQTLLTAAREAGVTRFVHVSTDEVYGTLG-- 136 Query: 111 PIDEFSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 P F+ + PL + Y SK AG+ ++ Y Sbjct: 137 PEGRFTESTPLAPNSPYSASKAAGDLMARAWFETY 171 >gi|189218045|ref|YP_001938687.1| dTDP-4-dehydrorhamnose reductase [Methylacidiphilum infernorum V4] gi|189184903|gb|ACD82088.1| dTDP-4-dehydrorhamnose reductase [Methylacidiphilum infernorum V4] Length = 293 Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 106/274 (38%), Gaps = 44/274 (16%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA---VDKAEDEPEIAFSINA 78 ++ + I +IDLL K + FF + + +IN A YT VD E+ N Sbjct: 19 KNRDFIAPSHKEIDLLNEKQLSDFFDRIAVEFVINAAGYTGKPNVDACEENKVDCLLGNV 78 Query: 79 EGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTPIDEFSP------TNPLNIYG 125 G +AK GI ++S+ ++ G SR E P T+ + Y Sbjct: 79 IIPGILAKVCAKKGIVFGHVSSGCLYQGDKGMNPDGSRIGFQEDDPPNFSFRTSRCSFYS 138 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML---RLAKERREISVVCDQFGTP 182 K GEE +A LR + + N++ +L RL R +S V Sbjct: 139 GCKALGEELLADSRCYIWRLRMPFHWQDHPKNYISKLLYYQRLIDMRNSLSEV------- 191 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW-----ESAERG 237 + ARA + + GI+H+T + G V+ E I + E+G Sbjct: 192 ---EEFARAAFECWEKKLP------FGIYHIT-NTGSVTTRQIVEKILRSPLGTKLKEKG 241 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSC-LDCSKLAN 270 + ++ K++ + P +C LD SK+ N Sbjct: 242 KKF--LFFENEKEFLKQVKAPRSNCVLDNSKILN 273 >gi|15807195|ref|NP_295924.1| UDP-glucose 4-epimerase [Deinococcus radiodurans R1] gi|6460005|gb|AAF11751.1|AE002053_6 UDP-glucose 4-epimerase [Deinococcus radiodurans R1] Length = 394 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 27/160 (16%) Query: 1 MKCLVIGNNGQIA-----------------QSLSSMCVQ----DVEIIRVGRPDIDLLKP 39 MK LV+G G I +LSS + +VE+IR DLL Sbjct: 1 MKLLVVGGAGYIGSHTVRQLRAAGHEVAVFDNLSSGHAEALPGEVELIRG-----DLLDA 55 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYI 98 + + PD II+ AA V ++ P + N G + ++ ++ +P ++ Sbjct: 56 ASIRAALEAQKPDAIIHFAALIEVGESMRAPGRYYRNNVVGTLNLLQSIVETRKVPLVFS 115 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ST V+ PI E + P ++YG++K E+ + ++ Sbjct: 116 STAAVYGTTDAVPIPEDAAMQPESVYGETKRMSEQMIHAF 155 >gi|309274609|gb|ADO64233.1| RmlB [Vibrio vulnificus] Length = 353 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 18/142 (12%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 +SL+S+ D R +D+ F PD +++ AA + VD++ D P Sbjct: 41 ESLASVAYSD----RYAFEQVDICDRAGLERVFAVHQPDAVMHLAAESHVDRSIDGPSAF 96 Query: 74 FSINAEGAGAIAKAADSI--GIPC--------IYISTDYVFDGLSRTPIDEFSPTN---P 120 N G + +AA S +PC +ISTD V+ L T D F+ T P Sbjct: 97 IETNIVGTYTLLEAARSYWNSLPCERKAAFRFHHISTDEVYGDLEGTD-DLFTETTSYAP 155 Query: 121 LNIYGKSKLAGEEKVASYTNNY 142 + Y SK + + V ++ Y Sbjct: 156 SSPYSASKASSDHLVRAWLRTY 177 >gi|289191516|ref|YP_003457457.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus sp. FS406-22] gi|288937966|gb|ADC68721.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus sp. FS406-22] Length = 301 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 +V+I+ AA V + + P IN G I + I I+ S+ V+ + Sbjct: 66 EVVIHQAAQINVRNSVENPIYDGDINVLGTINILEMIRKYDINKIIFASSVGVYGEPNYL 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+DE NPL+ YG SK GEE + Y Y ILR + VY Sbjct: 126 PVDENHTINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYG 171 >gi|238784750|ref|ZP_04628753.1| dTDP-glucose 4,6-dehydratase [Yersinia bercovieri ATCC 43970] gi|238714346|gb|EEQ06355.1| dTDP-glucose 4,6-dehydratase [Yersinia bercovieri ATCC 43970] Length = 339 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD---- 89 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 42 VDICDRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 101 Query: 90 ------SIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 102 QLSAEAKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 161 Query: 142 Y 142 Y Sbjct: 162 Y 162 >gi|183985101|ref|YP_001853392.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium marinum M] gi|183178427|gb|ACC43537.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium marinum M] Length = 314 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + F P+VI + AA V + +P+ S+N G +A+AA G+ ++ S Sbjct: 61 DLQAIFEQHRPEVIFHLAAQIDVRHSVADPQFDASVNVIGTLRLAEAARLTGVRKVVHTS 120 Query: 100 T-DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ++ + P E PT+P + Y K+AGE + ++ + Y Sbjct: 121 SGGSIYGTPPQYPTSERVPTDPASPYAAGKVAGEIYLNTFRHLY 164 >gi|150399168|ref|YP_001322935.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] gi|150011871|gb|ABR54323.1| NAD-dependent epimerase/dehydratase [Methanococcus vannielii SB] Length = 292 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 31/176 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---------------RVGRPDIDLLKPKDF 42 MK LV G G I + + ++ DV I+ + DI L K D Sbjct: 1 MKILVTGGAGFIGSHIVDLLIENGHDVTILDNLSTGNEKNINNSAKFINGDI-LDKNLDL 59 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD- 101 F + +I+ AA V + ++P + +IN G I + G+ I S+ Sbjct: 60 TGF------ECVIHEAAQINVRTSVEDPILDANINILGTINILEKMKEYGVKKIIFSSSG 113 Query: 102 -YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 V+ P+DE NPL+ YG SK EE + Y Y ILR + VY Sbjct: 114 GAVYGEPKYLPVDEKHDVNPLSPYGLSKFCAEEYIKLYNRLYNIEYCILRYSNVYG 169 >gi|329664258|ref|NP_001193137.1| UDP-glucose 4-epimerase [Bos taurus] gi|297472249|ref|XP_002685758.1| PREDICTED: UDP-galactose-4-epimerase [Bos taurus] gi|158454979|gb|AAI02186.2| GALE protein [Bos taurus] gi|296490070|gb|DAA32183.1| UDP-galactose-4-epimerase [Bos taurus] Length = 348 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I G + +SL VQD+ V ++D+L F S +I+ A AV + Sbjct: 39 IRGGGSMPESLRR--VQDLTGRSVEFEEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGE 96 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NI 123 + +P + +N G + + + G+ ++ S+ V+ P+DE PT N Sbjct: 97 SVQKPLDYYRVNLTGTIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156 Query: 124 YGKSKLAGEEKV-----ASYTNNYVILR 146 YGKSK EE + A N V+LR Sbjct: 157 YGKSKFFIEEMIRDLCQADKAWNAVLLR 184 >gi|159474190|ref|XP_001695212.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] gi|158276146|gb|EDP01920.1| NAD-dependent epimerase/dehydratase [Chlamydomonas reinhardtii] Length = 398 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 PD++++ AA V ++ +P + + + GI +Y ST V+ Sbjct: 134 PDLVMHFAAVAYVGESMRDPLQYYKNVTVNTVNVLDCMAAAGIKQLVYSSTCAVYGNPES 193 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSIFGSN 157 P+ E +P P+N YG+SKL EE + Y + +ILR ++++GS+ Sbjct: 194 LPVTEATPPKPINPYGQSKLMAEEVIRWYARSQPDFKSIILR---YFNVYGSD 243 >gi|149913027|ref|ZP_01901561.1| hypothetical protein RAZWK3B_03525 [Roseobacter sp. AzwK-3b] gi|149813433|gb|EDM73259.1| hypothetical protein RAZWK3B_03525 [Roseobacter sp. AzwK-3b] Length = 346 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 9/118 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F PD +++ AA + VD++ D P N G + +AA + Sbjct: 56 VDIRDRAELGRVFAQHKPDAVMHLAAESHVDRSIDGPGDFIETNIIGTYNMLEAARTHWI 115 Query: 92 --GIP----CIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G P +ISTD VF L T + E +P +P + Y SK + + V ++ + Y Sbjct: 116 GEGRPEEFRFHHISTDEVFGSLGETGLFTEETPYDPRSPYSASKASSDHLVRAWFHTY 173 >gi|116629773|ref|YP_814945.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus gasseri ATCC 33323] gi|300361533|ref|ZP_07057710.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri JV-V03] gi|116095355|gb|ABJ60507.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri ATCC 33323] gi|300354152|gb|EFJ70023.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri JV-V03] Length = 360 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 73 LDIRDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 132 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 133 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 163 >gi|312883359|ref|ZP_07743085.1| UDP-glucose 4-epimerase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368975|gb|EFP96501.1| UDP-glucose 4-epimerase [Vibrio caribbenthicus ATCC BAA-2122] Length = 337 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + +I+ A +V ++ EP +S N G + +A I Sbjct: 58 DILDKNLLVETMKRYGISAVIHFAGLKSVGESVSEPLKYYSNNVSGTLCLVEAMSECNIK 117 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I+ S+ V+ S PI+E PT+ N YG+SKL EE Sbjct: 118 TLIFSSSATVYGDPSTVPINEGFPTSATNPYGRSKLMVEE 157 >gi|226357998|ref|YP_002787738.1| Nucleoside-diphosphate-sugar epimerases; Epimerase, NAD dependent epimerase/dehydratase family [Deinococcus deserti VCD115] gi|226320241|gb|ACO48234.1| putative Nucleoside-diphosphate-sugar epimerases; putative Epimerase, NAD dependent epimerase/dehydratase family [Deinococcus deserti VCD115] Length = 309 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 8/124 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRT 110 DVI++ AA V + + + +N EG + +AA + GI + + ST V+ Sbjct: 60 DVIVHGAALHGVHLSNHSRDDFWKLNMEGTYHVYEAARAHGIKKVLLCSTMGVYGASVTV 119 Query: 111 PIDEFS------PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSML 163 P D F+ P P + YG +K EE Y+ ++ I ++ +F NF+ Sbjct: 120 PDDSFAVVTEDLPCLPGDFYGMTKTLAEELAGFYSRSHDIRTISYRLGMFVPENFVRYGF 179 Query: 164 RLAK 167 RL K Sbjct: 180 RLLK 183 >gi|189426414|ref|YP_001953591.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] gi|189422673|gb|ACD97071.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ] Length = 335 Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E +RV D+ + A +L D + N A T+ + P INA +I Sbjct: 55 EQVRVNISDVR----DEHAMKYLIQGQDFLFNLAGQTSHLDSMQNPYPDLEINARAQLSI 110 Query: 85 AKAA--DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +A + I ++ ST ++ P+DE P P+++ G +K+AGE Y N Y Sbjct: 111 LEACRHHNPAIKLVFASTRQMYGAPRYLPVDEKHPLAPVDVNGINKMAGEWYHLVYNNVY 170 Query: 143 VI 144 I Sbjct: 171 GI 172 >gi|320109105|ref|YP_004184695.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] gi|319927626|gb|ADV84701.1| NAD-dependent epimerase/dehydratase [Terriglobus saanensis SP1PR4] Length = 348 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D I + AA A DE + ++ N + +A+ A + I P ++IST+ ++ Sbjct: 67 DAIFHCAAQLAHGMRMDE-HLLWTSNVDATRLLAELAVAHSIRPFVFISTNCLWASNLGH 125 Query: 111 PIDEFSPT-NPLNIYGKSKLAGEEKVASYTN--NYVILRT 147 P++E P+ IYG+SKLA E+ + +T+ + VILR Sbjct: 126 PVNEAQDMPEPIEIYGRSKLAAEQVLEEFTDRLDVVILRV 165 >gi|120602748|ref|YP_967148.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris DP4] gi|120562977|gb|ABM28721.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris DP4] Length = 340 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 10/97 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-----D 105 D I+N AA T VD++ ++ + N G + +AA GIP ++ISTD V+ D Sbjct: 79 DAIVNFAAETHVDRSINDSTPFITTNVLGTQVLLQAALDRGIPRFVHISTDEVYGTLGPD 138 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 GL R E +P P + Y SK + V ++ Y Sbjct: 139 GLFR----EDTPLAPNSPYSASKAGADLMVRAFHETY 171 >gi|27364741|ref|NP_760269.1| UDP-glucose 4-epimerase [Vibrio vulnificus CMCP6] gi|27360886|gb|AAO09796.1| UDP-glucose 4-epimerase [Vibrio vulnificus CMCP6] Length = 336 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + + D G+ I+ S+ V+ + PI Sbjct: 77 VIHFAGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR-----TAWVYSIFG------- 155 E PT+ N YG+SKL EE + + + +LR A + G Sbjct: 137 RENFPTSATNPYGRSKLMVEECLTDFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIP 196 Query: 156 SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +N L + ++A RRE + V D + TP Sbjct: 197 NNLLPFVAQVAVGRREKLGVFGDDYPTP 224 >gi|52082327|ref|YP_081118.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787718|ref|YP_093547.1| hypothetical protein BLi04041 [Bacillus licheniformis ATCC 14580] gi|319648201|ref|ZP_08002418.1| GalE protein [Bacillus sp. BT1B_CT2] gi|52005538|gb|AAU25480.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52350220|gb|AAU42854.1| GalE [Bacillus licheniformis ATCC 14580] gi|317389836|gb|EFV70646.1| GalE protein [Bacillus sp. BT1B_CT2] Length = 329 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 17/148 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 + +++ AA + V ++ +P + N GA + K + I + ST + R Sbjct: 68 EAVMHFAADSLVGESVTDPLKYYDNNVYGAVCLLKVMKEFDVKQIVFSSTAATYGEPDRV 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR-----TAWVYSIFG------ 155 PI E PT+P N YG++KLA E+ + +Y +V+LR A V + G Sbjct: 128 PIMETDPTDPTNPYGETKLAIEKMLKWSEKAYGIRHVVLRYFNVAGAHVDGLIGEDHQPE 187 Query: 156 SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 ++ + +L++A +R+ I + D + TP Sbjct: 188 THLIPIILQVALGKRDKIMIFGDDYPTP 215 >gi|24374680|ref|NP_718723.1| dTDP-glucose 4,6-dehydratase [Shewanella oneidensis MR-1] gi|24349325|gb|AAN56167.1|AE015754_1 dTDP-glucose 4,6-dehydratase [Shewanella oneidensis MR-1] Length = 343 Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 34/178 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII-----------------------RVGRPDIDLL 37 M+ LV G G I +L M ++ E + R D+ Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA---------- 87 F PD++++ AA + VD++ D P N G + +A Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A +ISTD VF L+ T + E S +P + Y SK + + V ++ Y + Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYAL 178 >gi|331660133|ref|ZP_08361069.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] gi|315296836|gb|EFU56125.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 16-3] gi|324007458|gb|EGB76677.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 57-2] gi|331052701|gb|EGI24736.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA206] Length = 355 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|257468067|ref|ZP_05632163.1| UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase [Fusobacterium ulcerans ATCC 49185] Length = 718 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 32/140 (22%) Query: 32 PDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 P+++L+ + K F + P+++ + AA+ V E PE A N G + Sbjct: 441 PNLELISEICNVREKKKLEILFEKYRPNIVFHAAAHKHVPLMEHNPEEAIKNNIFGTKNV 500 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE------EKVAS 137 A+ AD + + ISTD NP N+ G SK A E KVA Sbjct: 501 AECADKYRVERMVLISTD--------------KAVNPTNLMGASKRACELVIQHMNKVAK 546 Query: 138 YTNNYVILRTAWVYSIFGSN 157 +T Y+ +R ++ GSN Sbjct: 547 HT-KYMAVRFG---NVLGSN 562 >gi|150402268|ref|YP_001329562.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C7] gi|150033298|gb|ABR65411.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis C7] Length = 292 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 31/176 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---------------RVGRPDIDLLKPKDF 42 MK LV G G I + + ++ DV ++ + + DI L K D Sbjct: 1 MKILVTGGAGFIGSHIVDLLIENGHDVSVLDNLSTGNEKNLNSSAKFIKGDI-LDKNLDL 59 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD- 101 F + +I+ AA V + + P +IN G I + G+ I S+ Sbjct: 60 TGF------ECVIHEAAQINVRTSVENPVFDANINVLGTINILEKIKEYGVKKIIFSSSG 113 Query: 102 -YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 V+ P+DE NPL+ YG SK EE + Y Y ILR + VY Sbjct: 114 GAVYGEPEYLPVDEKHAVNPLSPYGLSKFCAEEYIKLYARLYGIEYCILRYSNVYG 169 >gi|72162110|ref|YP_289767.1| UDP-glucose-4-epimerase [Thermobifida fusca YX] gi|71915842|gb|AAZ55744.1| UDP-glucose-4-epimerase [Thermobifida fusca YX] Length = 313 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 21/154 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPD------IDLLKPKDFASFFLS 48 M+ LV G +G++ +S+ ++ V V+++ PD DLL A F Sbjct: 10 MRVLVTGGSGRLGRSVVAVLADRGHEVTSVDLVDGPCPDGVRGVVADLLDDDARARVFAE 69 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P+ +++ A AV A + EI IN A A+ A + G C ++ G + Sbjct: 70 ARPEGVVHLAGI-AVPFARPDLEI-LDINTRLAWAVLTDAVACGARCAVAASSPTVFGYN 127 Query: 109 RT-------PIDEFSPTNPLNIYGKSKLAGEEKV 135 P+DE P P + YG SKL EE V Sbjct: 128 TPSWRPRYLPLDEEHPVAPWHAYGLSKLIIEETV 161 >gi|26250527|ref|NP_756567.1| dTDP-glucose 4,6-dehydratase [Escherichia coli CFT073] gi|227888628|ref|ZP_04006433.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|300985799|ref|ZP_07177591.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|301047332|ref|ZP_07194417.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 185-1] gi|306815174|ref|ZP_07449327.1| dTDP-glucose 4,6-dehydratase [Escherichia coli NC101] gi|26110957|gb|AAN83141.1|AE016769_256 dTDP-glucose 4,6-dehydratase [Escherichia coli CFT073] gi|222035489|emb|CAP78234.1| dTDP-glucose 4,6-dehydratase [Escherichia coli LF82] gi|227834467|gb|EEJ44933.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 83972] gi|300300749|gb|EFJ57134.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 185-1] gi|300407950|gb|EFJ91488.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 45-1] gi|305851543|gb|EFM51997.1| dTDP-glucose 4,6-dehydratase [Escherichia coli NC101] gi|307555915|gb|ADN48690.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ABU 83972] gi|312948344|gb|ADR29171.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O83:H1 str. NRG 857C] gi|315293127|gb|EFU52479.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 153-1] Length = 355 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|281180838|dbj|BAI57168.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE15] Length = 355 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|222106701|ref|YP_002547492.1| hypothetical protein Avi_5694 [Agrobacterium vitis S4] gi|221737880|gb|ACM38776.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 255 Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSK 128 E + N G I +AA +G+P I +++ Y GL PIDE +P P + YG SK Sbjct: 76 ETVLNANIRGTYHIFEAARRLGVPRIVLASSYHVVGLHPFGAPIDETAPMLPDSFYGLSK 135 Query: 129 LAGEEKVASYTNN 141 GE +Y + Sbjct: 136 AYGELLARTYHDK 148 >gi|315283601|ref|ZP_07871748.1| UDP-glucose 4-epimerase [Listeria marthii FSL S4-120] gi|313612757|gb|EFR86752.1| UDP-glucose 4-epimerase [Listeria marthii FSL S4-120] Length = 327 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII-----RVGRPDI----------DLLKPKDFAS 44 M +V+G G I + ++ + + E++ R G + D+ +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHKEAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + D +I+ AA + V ++ + P + N G + + + G+ I S+ Sbjct: 61 VFEKETVDGVIHFAASSLVGESMEVPLEYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 G R PI E PTNP + YG +KL E+ + +Y +V LR +++ G Sbjct: 121 YGEPERVPITEDMPTNPESTYGDTKLIMEKMMKWCDKAYGMKFVALR---YFNVAGAKAD 177 Query: 156 ----------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 178 GSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|296131652|ref|YP_003638899.1| NAD-dependent epimerase/dehydratase [Thermincola sp. JR] gi|296030230|gb|ADG80998.1| NAD-dependent epimerase/dehydratase [Thermincola potens JR] Length = 322 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 41/204 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-----------------------GRPDIDLL 37 M+ LV G G L V+D EI +V G+ ++ + Sbjct: 1 MRVLVTGAAGLCGTHLVDELVRDEEISKVYGIDNLSRGFPRKEEFVIGEQWQGKFELIVK 60 Query: 38 KPKDFASFFLS-FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-GAIAKAADSIGIPC 95 K +D + ++ DV+++ AAY + +A + P+ F N G + K + P Sbjct: 61 KYQDLSVREINNLDVDVVVHLAAYNSAREAMETPDEYFVNNDYGTLKLLQKLFHTKKNPF 120 Query: 96 -IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 I+ S ++ + P+ E S +NI+ +KLAGE + + N Y V++R + V Sbjct: 121 FIFASAAEIYGKPVKEPVSESSAPTAMNIFAATKLAGENYCSVFFNWYNYPLVVIRLSKV 180 Query: 151 Y----------SIFGSNFLLSMLR 164 Y S+ G NF+ LR Sbjct: 181 YGENQNLVGYTSVVG-NFICRALR 203 >gi|292670158|ref|ZP_06603584.1| dTDP-glucose 4,6-dehydratase [Selenomonas noxia ATCC 43541] gi|292648110|gb|EFF66082.1| dTDP-glucose 4,6-dehydratase [Selenomonas noxia ATCC 43541] Length = 335 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F PD+I+N AA + VD++ + PEI N G + A GI Sbjct: 59 DIADRRAVYTTFECTQPDIIVNFAAESHVDRSIENPEIFLQTNIIGTSVLLDACRKYGIQ 118 Query: 95 CIY-ISTDYVFDGLSRTPID-EFSPTNPLN 122 + +STD V+ L D F+ PL+ Sbjct: 119 RYHQVSTDEVYGDLPLNRTDLLFTEETPLH 148 >gi|190893834|ref|YP_001980376.1| UDP-glucose 4-epimerase [Rhizobium etli CIAT 652] gi|190699113|gb|ACE93198.1| UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652] Length = 327 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ + P I++ AA Sbjct: 20 CLDLANKGYKPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLANHRPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKHIVEQALADY-DQYKSLRS 165 >gi|86138142|ref|ZP_01056717.1| hypothetical protein MED193_01405 [Roseobacter sp. MED193] gi|85825169|gb|EAQ45369.1| hypothetical protein MED193_01405 [Roseobacter sp. MED193] Length = 337 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDG 106 F+P VII+ A V + + P N G + +AA + + + + S+ V+ G Sbjct: 75 EFAPQVIIHLAGQAGVRYSLENPRSYLETNVMGTFNVMEAARRLKVEHLLMASSSSVYGG 134 Query: 107 LSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E T+ PL IY SK A E SY + + + T + ++++G Sbjct: 135 NDVMPFTELDRTDAPLTIYAASKKANESMGHSYAHLWDLPTTMFRFFTVYG 185 >gi|317968492|ref|ZP_07969882.1| dTDP-glucose 4,6-dehydratase [Synechococcus sp. CB0205] Length = 368 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 +DL + + PD++++ AA + VD++ D P + S N G + +AA Sbjct: 68 VDLSDAEATTAAVRQADPDLVMHLAAESHVDRSIDGPGVFVSSNVLGTFNMLQAARAHFE 127 Query: 89 -----DSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +ISTD VF L + E +P +P + Y SK A + V+++ ++Y Sbjct: 128 QLPAEQAQAFRFHHISTDEVFGSLGEQGRFSETTPYDPRSPYSASKAASDHLVSAWHHSY 187 >gi|304437016|ref|ZP_07396979.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369967|gb|EFM23629.1| dTDP-glucose 4,6-dehydratase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 335 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 + F PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 ALFAREKPDVVVNFAAESHVDRSIETPEIFLQTNIIGTSILLDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ PL+ Sbjct: 128 VYGDL---PLDRPDLLFTEETPLH 148 >gi|302342054|ref|YP_003806583.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301638667|gb|ADK83989.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 327 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 75 SINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 +N GA +A+AA G+ IY ST V + R P DE +P N + Y ++K GE Sbjct: 88 QVNEGGARLVAQAAQDEGVRKFIYCSTCGVHGNVERPPADENAPINAADYYQQTKYNGEV 147 Query: 134 KVASYTN---NYVILRTAWVYS 152 + + + ILR A +Y Sbjct: 148 ALRPFIDAGMKATILRPAAIYG 169 >gi|170759027|ref|YP_001787485.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406016|gb|ACA54427.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 307 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P +N G I + +Y S+ V+ PIDE Sbjct: 76 IDVQKSIANPIFDSDVNVCGTINIINNCVKYNVKKIVYSSSAAVYGHPQYLPIDEAHGIR 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRVFSNLNNLDFTILRYANVYGI 173 >gi|146342050|ref|YP_001207098.1| putative NAD dependent epimerase/dehydratase family protein [Bradyrhizobium sp. ORS278] gi|146194856|emb|CAL78881.1| putative NAD dependent epimerase/dehydratase family protein [Bradyrhizobium sp. ORS278] Length = 339 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSP 117 A V K+ +P INA G + +AA I +Y S+ V+ +S +DE + Sbjct: 79 AVQCVRKSLGKPIENHEINATGTLRMLEAARKHNIKRFVYCSSSEVYGSVSTGLLDEDTL 138 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNY 142 P+ +YG +KLAGE +Y Y Sbjct: 139 CRPVTVYGAAKLAGELYTDAYHQTY 163 >gi|118619383|ref|YP_907715.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium ulcerans Agy99] gi|118571493|gb|ABL06244.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium ulcerans Agy99] Length = 314 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + F P+VI + AA V + +P+ S+N G +A+AA G+ ++ S Sbjct: 61 DLQAIFEQHRPEVIFHLAAQIDVRHSVADPQFDASVNVIGTLRLAEAARLTGVRKVVHTS 120 Query: 100 T-DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ++ + P E PT+P + Y K+AGE + ++ + Y Sbjct: 121 SGGSIYGTPPQYPTSERVPTDPASPYAAGKVAGEIYLNTFRHLY 164 >gi|118444364|ref|YP_877617.1| UDP-glucose 4-epimerase [Clostridium novyi NT] gi|118134820|gb|ABK61864.1| UDP-glucose 4-epimerase [Clostridium novyi NT] Length = 323 Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 2/145 (1%) Query: 9 NGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 NGQ L ++ E + G+ + DL K F + D +I+ AAY+ V ++ Sbjct: 23 NGQDIVVLDNLEKGHREAVLGGKFYEGDLRDSKILDRVFTENNIDSVIDFAAYSLVGESV 82 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 +EP F N + G+ I + ST + TPI E T P N YG+ Sbjct: 83 EEPLKYFENNIGSVINLLDVMKRHGVKNIVFSSTAATYGEPENTPILESDKTFPTNPYGE 142 Query: 127 SKLAGEEKVASYTNNYVILRTAWVY 151 SKLA E+ + Y I TA Y Sbjct: 143 SKLAVEKILKWCDKAYGIKYTALRY 167 >gi|320197600|gb|EFW72212.1| dTDP-glucose 4,6-dehydratase [Escherichia coli WV_060327] Length = 355 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|303230666|ref|ZP_07317416.1| dTDP-glucose 4,6-dehydratase [Veillonella atypica ACS-049-V-Sch6] gi|302514721|gb|EFL56713.1| dTDP-glucose 4,6-dehydratase [Veillonella atypica ACS-049-V-Sch6] Length = 326 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 11/113 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F + PD+++N AA + VD++ EP+I N G + G Sbjct: 58 VDITDRISMRNIFEQYHPDIVVNFAAESHVDRSITEPDIFIKTNVLGTQVLLDLCKEFGT 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASY 138 + +STD V+ L P++E F+ P++ Y SK + + V +Y Sbjct: 118 KRFHQVSTDEVYGDL---PLNEPELFFTEETPIHASSPYSASKASADLLVLAY 167 >gi|255009516|ref|ZP_05281642.1| putative UDP-galactose 4-epimerase [Bacteroides fragilis 3_1_12] gi|313147291|ref|ZP_07809484.1| NAD dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] gi|313136058|gb|EFR53418.1| NAD dependent epimerase/dehydratase [Bacteroides fragilis 3_1_12] Length = 298 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--DVIINPA 58 MK L G +G + +++ + + I VG D K D A F+ D++++ A Sbjct: 1 MKLLFTGASGFLGRNIYQLLEKTYVIKTVGLTPQDDYK-IDIARNIPVFTEVFDIVLHAA 59 Query: 59 AYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDEF 115 + K E+E + F +N +G + A + GIP I+IST V+ S I E Sbjct: 60 GKAHSTPKTEEEKQAFFDVNLQGTKNLCTALEQSGIPKAFIFISTVAVYGCDSGENITEE 119 Query: 116 SPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 P N Y SK+ E+ + A + ILR + + L +M+ K + Sbjct: 120 HPLNGTTPYALSKIKAEKYLEGWCAMHNVKLSILRPSLIAGPNPPGNLGAMIHGIKTNKY 179 Query: 172 ISV 174 +S+ Sbjct: 180 LSI 182 >gi|269839235|ref|YP_003323927.1| UDP-glucose 4-epimerase [Thermobaculum terrenum ATCC BAA-798] gi|269790965|gb|ACZ43105.1| UDP-glucose 4-epimerase [Thermobaculum terrenum ATCC BAA-798] Length = 327 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 4/121 (3%) Query: 34 IDLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 +DLL A F +P + I++ A++T V ++ PE+ N + + A Sbjct: 50 VDLLDAHAVAEVF-DANPGIEAIMHFASHTLVGESMQRPELYLRNNIVMGVNLLEVAVPR 108 Query: 92 GI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 G+ I ST +F +R PIDE P +P + YG+SKL E + Y Y + A Sbjct: 109 GVRKFILSSTANLFGNPTRVPIDESQPLDPGSPYGESKLMLERILRWYERIYDLRYGALR 168 Query: 151 Y 151 Y Sbjct: 169 Y 169 >gi|225016238|ref|ZP_03705430.1| hypothetical protein CLOSTMETH_00141 [Clostridium methylpentosum DSM 5476] gi|224950996|gb|EEG32205.1| hypothetical protein CLOSTMETH_00141 [Clostridium methylpentosum DSM 5476] Length = 352 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F + D ++N AA + VD++ +PEI N G + A + Sbjct: 60 DICDKDAMQAIFDKYEIDYVVNFAAESHVDRSISDPEIFVQTNVLGTVNLLNIAKNAWQT 119 Query: 92 -------GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + +STD V+ L T E +P +P + Y SK + + V +Y++ Y Sbjct: 120 GDDQYKDGVKFLQVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASADFFVKAYSDTY 178 >gi|218692067|ref|YP_002400279.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ED1a] gi|218429631|emb|CAR10452.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ED1a] Length = 355 Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|328951358|ref|YP_004368693.1| dTDP-glucose 4,6-dehydratase [Marinithermus hydrothermalis DSM 14884] gi|328451682|gb|AEB12583.1| dTDP-glucose 4,6-dehydratase [Marinithermus hydrothermalis DSM 14884] Length = 336 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA + VD++ +P N EG + + A G+ + +STD V+ LS T Sbjct: 75 DAVVNFAAESHVDRSLLDPRPFVKTNVEGTLVLLEEARRAGVKRFLQVSTDEVYGDLSGT 134 Query: 111 PID--EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E P P + Y SK E V +Y +Y Sbjct: 135 ERHSVETDPLRPRSPYAASKAGAEHLVFAYGVSY 168 >gi|325002124|ref|ZP_08123236.1| NAD-dependent epimerase/dehydratase [Pseudonocardia sp. P1] Length = 315 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 22/174 (12%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEII---------------RVGRPDIDLLKPKDFAS 44 M+ LV G G I +L ++ + E++ V ++D+ FA Sbjct: 1 MRALVTGGAGFIGSTLVDTLLARGDEVLVVDDLSSGKRENLAPGVALTELDIRDTDGFAK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STDY 102 F+P+ + + AA V + +P S+N G ++ +AA G + + + Sbjct: 61 CAAEFAPEAVYHLAAQIDVRTSMADPVHDASVNVLGTLSVLQAARDTGARGVVVCSTGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 ++ + P E P P + YG SKLA E + + ++LR A VY Sbjct: 121 IYGDGAPLPTTEDEPAEPESPYGMSKLAAERYTRFFVRAHGLPALVLRFANVYG 174 >gi|110596873|ref|ZP_01385163.1| UDP-glucose 4-epimerase [Chlorobium ferrooxidans DSM 13031] gi|110341560|gb|EAT60020.1| UDP-glucose 4-epimerase [Chlorobium ferrooxidans DSM 13031] Length = 326 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D++ P + D I+ AA A ++ PE N G I A + + Sbjct: 51 DIMHPAQLRAVMTGGGFDGCIHLAALKAAGQSMLHPERYAEANIAGTINILNEATAASLS 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P I+ S+ V+ P+DE P P N YG +KL E + Y Sbjct: 111 PIIFSSSAAVYGAPQYLPMDEEHPKKPENFYGYTKLEIERMLGWY 155 >gi|332286411|ref|YP_004418322.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] gi|330430364|gb|AEC21698.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] Length = 340 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 30/163 (18%) Query: 5 VIGNNGQIA------------QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 +IGN G QSL+S+ + R D+ D F + PD Sbjct: 21 IIGNTGDFVVNIDKLTYAGNLQSLTSVSSSN----RYAFEHADICNRADLGHIFEQYQPD 76 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGA-----------GAIAKAADSIGIPCIYISTD 101 +++ AA + VD++ D P N G A+ AA + G ++STD Sbjct: 77 AVVHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEVARQHWSALGSAAKA-GFRFHHVSTD 135 Query: 102 YVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L+ + E +P P + Y SK + V ++ Y Sbjct: 136 EVYGDLAGPQGRFTEATPYAPSSPYSASKAGSDHLVRAWNRTY 178 >gi|124024030|ref|YP_001018337.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] gi|123964316|gb|ABM79072.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] Length = 287 Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 7/165 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+IN + V++ P A +N+ + +D G + ST+ VFD + Sbjct: 67 VVINCISLNGVNQCNVSPLEAVIVNSLLPKLLCHYSDICGYKLFHFSTECVFDDSEQIIS 126 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 P P YG +KLAGE N +I + S + M+ + ++ + Sbjct: 127 SSVFPKAPSTTYGATKLAGE--FLPNKNLQLIRLPLLLSRKKNSQIVWKMVDMLEQNKPA 184 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 D TP + + ++++ ++L+ S + H ++D Sbjct: 185 KASTDVISTPIFVEDLVQRVLEMINSLL-----SFESVIHFSSDS 224 >gi|289627630|ref|ZP_06460584.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870812|gb|EGH05521.1| CDP-glucose-4,6-dehydratase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 118 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIYISTDYV 103 +F PD+I++ AA V ++ EP F +NA+G + +AA + G+ C ++TD V Sbjct: 29 AFQPDLILHLAAQPLVRRSYREPVQTFMVNAQGTAHVLEAARLVKSVRGVLC--VTTDKV 86 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGE 132 + P E P + Y SK A E Sbjct: 87 YKNNEWAWPYRENDPLGGKDPYSASKAAAE 116 >gi|237734429|ref|ZP_04564910.1| polysaccharide biosynthesis protein capD [Mollicutes bacterium D7] gi|229382659|gb|EEO32750.1| polysaccharide biosynthesis protein capD [Coprobacillus sp. D7] Length = 586 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 22/119 (18%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F + PD++ + AA+ V ED P A N G +A+AAD I ISTD Sbjct: 303 KLFEIYHPDIVYHAAAHKHVPLMEDSPNEAIKNNVFGTLNVARAADKYNAQKFILISTD- 361 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN 157 NP N+ G +K E V +Y YV +R ++ GSN Sbjct: 362 -------------KAVNPTNVMGATKRLCEMIVQTYNKRSQTEYVAVRFG---NVLGSN 404 >gi|91213310|ref|YP_543296.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UTI89] gi|117626048|ref|YP_859371.1| dTDP-glucose 4,6-dehydratase [Escherichia coli APEC O1] gi|218560854|ref|YP_002393767.1| dTDP-glucose 4,6-dehydratase [Escherichia coli S88] gi|237702798|ref|ZP_04533279.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 3_2_53FAA] gi|91074884|gb|ABE09765.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UTI89] gi|115515172|gb|ABJ03247.1| dTDP-glucose 4,6-dehydratase [Escherichia coli APEC O1] gi|218367623|emb|CAR05406.1| dTDP-glucose 4,6-dehydratase [Escherichia coli S88] gi|226902969|gb|EEH89228.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 3_2_53FAA] gi|294490800|gb|ADE89556.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IHE3034] gi|307628852|gb|ADN73156.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UM146] gi|315284661|gb|EFU44106.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 110-3] gi|323949328|gb|EGB45218.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H252] gi|323954102|gb|EGB49899.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H263] Length = 355 Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|325116233|emb|CBZ51786.1| hypothetical protein NCLIV_015780 [Neospora caninum Liverpool] Length = 438 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 11/155 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVE-IIRVGRPDI---DLLKPKDFASFFLSFSPDVI 54 + L+ G GQ LS ++ +V I+R + + DLL S S P I Sbjct: 69 RALITGITGQDGSYLSEFLLEKGYEVHGILRRCKLKLHHGDLLDSSCLFSIVASVRPHEI 128 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDGLSRT 110 N AA + V + + PE + G + +A + G+ IY ST +F + T Sbjct: 129 YNLAAQSHVKVSFEMPEYTSEVTGLGTLRLLEAVRTAGLSKHTRIYQASTSELFGRVQET 188 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 P E +P P + YG +KL V +Y +Y I Sbjct: 189 PQSETTPFYPRSPYGIAKLYAYWTVVNYRESYGIF 223 >gi|226941683|ref|YP_002796757.1| UDP-glucose 4-epimerase [Laribacter hongkongensis HLHK9] gi|226716610|gb|ACO75748.1| UDP-glucose 4-epimerase [Laribacter hongkongensis HLHK9] Length = 337 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 ++ ++ +A+ +S + + V ++ D D+L A + D +++ A AV Sbjct: 33 LVNSDAGVAERVSFLAGKTVPLVIGDVRDRDIL-----ADVLKRHAIDAVVHFAGLKAVG 87 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNPLNI 123 ++ +P ++ N +G ++ +A +S GI + S+ G R P DE P +N Sbjct: 88 ESVQKPIDYYANNVQGTISLVQAMESTGIHRLVFSSSATVYGTPRYLPYDEKHPVGAINP 147 Query: 124 YGKSKLAGEEKVA 136 YG++K E +A Sbjct: 148 YGRTKQHVEGMLA 160 >gi|120400364|gb|ABM21419.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 354 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 67 LDIRDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 126 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 127 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 157 >gi|229490919|ref|ZP_04384754.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis SK121] gi|7110453|gb|AAF36926.1|AF221951_2 putative UDP-galactose 4-epimerase GalE [Rhodococcus erythropolis] gi|229322309|gb|EEN88095.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis SK121] Length = 329 Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 15/146 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ PE + N + +A G P ++ ST + ++ Sbjct: 69 DGVLHFAAQSLVGESVLHPEKYWRGNVVTTIELLEAIRVSGTPRLVFSSTAATYGEPEQS 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS-- 161 PI E +PT P N YG +KLA + + SY+ + + T A Y G N ++ Sbjct: 129 PIVETAPTRPTNPYGATKLAIDHAITSYSIAHGLGATSLRYFNVAGAYKSAGENRVIETH 188 Query: 162 ----MLRLAKERRE-ISVVCDQFGTP 182 +L++A E+R+ ISV + TP Sbjct: 189 LIPLVLQVALEQRDKISVFGTDWPTP 214 >gi|322371812|ref|ZP_08046355.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] gi|320548697|gb|EFW90368.1| NAD-dependent epimerase/dehydratase [Haladaptatus paucihalophilus DX253] Length = 310 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 13/158 (8%) Query: 60 YTAVDK--AEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFS 116 + A DK D+P F N E I + D +G+ + S+ V+ R ++++ Sbjct: 76 FAAADKYVNTDDPRPQFEENGEMTYNILERMDEVGVTNFAFTSSSTVYGEAPRPTPEDYA 135 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-------FGSNFLLSMLRLAKER 169 P P++IYG +KL+ E ++++ ++Y T W + FG+ + + E Sbjct: 136 PLEPISIYGSAKLSEEALLSTFAHSYDF--TVWNFRFANIVGPRFGAGVVPDFVEKLDEN 193 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 ++ + S + + + + ++EN+D ++ Sbjct: 194 PDVLTILGNGLQEKSYMHVTECTEAMRY-VVENADDAM 230 >gi|320155133|ref|YP_004187512.1| UDP-glucose 4-epimerase [Vibrio vulnificus MO6-24/O] gi|319930445|gb|ADV85309.1| UDP-glucose 4-epimerase [Vibrio vulnificus MO6-24/O] Length = 336 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + + D G+ I+ S+ V+ + PI Sbjct: 77 VIHFAGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR-----TAWVYSIFG------- 155 E PT+ N YG+SKL EE + + + +LR A + G Sbjct: 137 REDFPTSATNPYGRSKLMVEECLTDFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIP 196 Query: 156 SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +N L + ++A RRE + V D + TP Sbjct: 197 NNLLPFVAQVAVGRREKLGVFGDDYPTP 224 >gi|218511077|ref|ZP_03508955.1| UDP-glucose 4-epimerase protein [Rhizobium etli Brasil 5] Length = 342 Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ P I++ AA Sbjct: 20 CLDLANKGYKPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLAKHRPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQLP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKHIVEQALADY-DQYKSLRS 165 >gi|332158703|ref|YP_004423982.1| UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase [Pyrococcus sp. NA2] gi|331034166|gb|AEC51978.1| UDP- or dTTP-glucose 4-epimerase or 4-6-dehydratase [Pyrococcus sp. NA2] Length = 314 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 36/228 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GR-PDIDLLKPKDFASFFLS----- 48 M+ LV G G I L ++D +RV GR +I+ D F Sbjct: 1 MRALVTGGAGFIGSHLVDKLMEDNWRVRVLDDLSAGRIENIEQWLDNDRFEFIRGDMRDI 60 Query: 49 -------FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 DV+ + AA V + +P + + N + +A + I+ S+ Sbjct: 61 NIIRDSVEGVDVVFHLAANPEVRISSQKPSLLYETNVFITYNLLEAIKDSNVKFLIFTSS 120 Query: 101 DYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 V+ S P ++++P P+++YG +KLA E ++ Y++ + +I+R A +I G Sbjct: 121 STVYGEASVIPTPEDYAPLKPISVYGGAKLAAEALISGYSHIFNFRSLIIRLA---NIIG 177 Query: 156 SNFLLSML-----RLAKERREISVVCDQFGTP-TSALQIARAIIQIAH 197 S ++ +L + RE+ ++ D GT S L ++ I I H Sbjct: 178 SRSTHGVIYDFINKLRRNPRELEILGD--GTQRKSYLHVSDTIEGIMH 223 >gi|300773374|ref|ZP_07083243.1| UDP-N-acetylglucosamine 4-epimerase [Sphingobacterium spiritivorum ATCC 33861] gi|300759545|gb|EFK56372.1| UDP-N-acetylglucosamine 4-epimerase [Sphingobacterium spiritivorum ATCC 33861] Length = 256 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 14/149 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR------PDIDLLK---PKDFASFFLSF 49 MK ++IG +G + L + ++ + +I+ V + DI +L K+ LS Sbjct: 1 MKIVIIGGSGFVGTQLIDLLLKTTNYQIVNVDKNESKRFADITVLTNILDKELLCNRLSG 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 S D++I AA D + + +N +G +A + GI I ++ GL++ Sbjct: 61 S-DIVILLAAEHRDDVTPTS--LYYDVNVQGMKNTLQAMKTNGIKRIIFTSSVAIYGLNK 117 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 DE +P N YGKSK E+ + + Sbjct: 118 ANPDESFSADPFNHYGKSKWQAEQVLQEW 146 >gi|167586358|ref|ZP_02378746.1| dTDP-glucose 4,6-dehydratase [Burkholderia ubonensis Bu] Length = 353 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F +P +++ AA + VD++ P N G + +A Sbjct: 56 VDICDRAALDALFAEHTPRAVVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARAHWN 115 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD G +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 116 GLSDADKAGFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 175 Query: 142 Y 142 Y Sbjct: 176 Y 176 >gi|331006697|ref|ZP_08329974.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989] gi|330419505|gb|EGG93894.1| UDP-glucose 4-epimerase [gamma proteobacterium IMCC1989] Length = 340 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGI 93 D+ D F + D +I+ A AV ++ P + +N G+ A+A+ A+ Sbjct: 58 DVRNRDDLRRVFSAHKIDAVIHFAGLKAVGESAQIPLHYYDVNVAGSIALAEVMAEYECY 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ + +P E PT+ N+YG++KL EE Sbjct: 118 RLVFSSSATVYGADAPSPYIETLPTSACNVYGRTKLMVEE 157 >gi|226306287|ref|YP_002766247.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis PR4] gi|226185404|dbj|BAH33508.1| UDP-glucose 4-epimerase [Rhodococcus erythropolis PR4] Length = 329 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 15/146 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ PE + N + +A G P ++ ST + ++ Sbjct: 69 DGVLHFAAQSLVGESVLHPEKYWRGNVVTTIELLEAIRVSGTPRLVFSSTAATYGEPEQS 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSNFLLS-- 161 PI E +PT P N YG +KLA + + SY+ + + T A Y G N ++ Sbjct: 129 PIVETAPTRPTNPYGATKLAIDHAITSYSIAHGLGATSLRYFNVAGAYKSAGENRVIETH 188 Query: 162 ----MLRLAKERRE-ISVVCDQFGTP 182 +L++A E+R+ ISV + TP Sbjct: 189 LIPLVLQVALEQRDKISVFGTDWPTP 214 >gi|188533477|ref|YP_001907274.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] gi|188028519|emb|CAO96381.1| DTDP-glucose 4,6-dehydratase [Erwinia tasmaniensis Et1/99] Length = 357 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD--SIG 92 D+ P+ F F PDV+++ AA + VD++ D P N G + +AA G Sbjct: 58 DICDPESLNRIFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARIYWFG 117 Query: 93 IP--------CIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E + P + Y SK + + V ++ Y Sbjct: 118 LPFERKEAFRFHHISTDEVFGDLHGTDDLFTEQTAYAPSSPYSASKASSDHLVRAWLRTY 177 >gi|37681210|ref|NP_935819.1| UDP-glucose 4-epimerase [Vibrio vulnificus YJ016] gi|37199961|dbj|BAC95790.1| UDP-glucose 4-epimerase [Vibrio vulnificus YJ016] Length = 336 Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + + D G+ I+ S+ V+ + PI Sbjct: 77 VIHFAGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILR-----TAWVYSIFG------- 155 E PT+ N YG+SKL EE + + + +LR A + G Sbjct: 137 REDFPTSATNPYGRSKLMVEECLTDFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIP 196 Query: 156 SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +N L + ++A RRE + V D + TP Sbjct: 197 NNLLPFVAQVAVGRREKLGVFGDDYPTP 224 >gi|322806342|emb|CBZ03910.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 303 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 7/157 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + +G+N I +LS+ + +V + + I+ + + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDTNVSKIFEKEKFDIVYHLAAQI 76 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V K+ P ++N G I + + +Y S+ V+ PIDE P Sbjct: 77 DVQKSITNPIFDSNVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPGYLPIDEKHVIMP 136 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 ++ YG SK EE + ++N ++ ILR A VY I Sbjct: 137 ISYYGLSKYTAEEYIRLFSNLNNLDFTILRYANVYGI 173 >gi|313900766|ref|ZP_07834258.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. HGF2] gi|312954436|gb|EFR36112.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. HGF2] Length = 342 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DV++N AA + VD++ ++PE N G + A + GI + +STD V+ L Sbjct: 76 DVVVNFAAESHVDRSIEDPESFVRTNVMGTTTLLDACNKYGIQRYHQVSTDEVYGDL--- 132 Query: 111 PIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 P+D+ F+ PL+ Y SK A + V +Y Y Sbjct: 133 PLDKPDLFFTEETPLHTSSPYSSSKAAADLFVLAYHRTY 171 >gi|256022266|ref|ZP_05436131.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia sp. 4_1_40B] gi|301329607|ref|ZP_07222374.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 78-1] gi|300844283|gb|EFK72043.1| UDP-N-acetylglucosamine 4-epimerase [Escherichia coli MS 78-1] Length = 331 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 34/69 (49%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + + + G+ I ++ GL++ DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLASMEKNGVKNIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EEKVASYTN 140 EE + + N Sbjct: 140 EEVLREWYN 148 >gi|218660654|ref|ZP_03516584.1| UDP-glucose 4-epimerase protein [Rhizobium etli IE4771] Length = 396 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 FSPD +I+ A V ++ + P + N G+ + +A I I S+ G+ Sbjct: 66 FSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLEACLDQDIDRIVFSSSCATYGVP 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 + PI E +P P+N YG++KL A E+ A+Y + LR Sbjct: 126 ASLPIREETPQQPVNPYGRTKLIFEMALEDFAAAYGIRFAALR 168 >gi|90577845|ref|ZP_01233656.1| putative UDP-glucose 4-epimerase [Vibrio angustum S14] gi|90440931|gb|EAS66111.1| putative UDP-glucose 4-epimerase [Vibrio angustum S14] Length = 339 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 30/163 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR---------------VGR-PDIDLLKP----- 39 M+ LV G G I S CVQ +E +GR ++ +KP Sbjct: 1 MRVLVTGGMGYIG---SHTCVQMIEAAMTPIIVDNLYNSKETVLGRIENLTGVKPAFYHG 57 Query: 40 --KDFA---SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 +D A F D +I+ A AV ++ ++P + N G + +A + G+ Sbjct: 58 DIRDRAFLDKVFAENEIDAVIHFAGLKAVGESVEKPLEYYDNNVHGTLVLVEAMRAAGVN 117 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 I+ S+ V+ + PI E PT+ N YG+SKL EE +A Sbjct: 118 ALIFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEECLA 160 >gi|55379498|ref|YP_137348.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232223|gb|AAV47642.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 334 Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 2/113 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V + P +N G + A GI + S+ V+ Sbjct: 87 DYVYHQAAQAGVRPSVKNPRKYDEVNVNGTLNLLDACRDEGIERFVMASSSSVYGKPQYL 146 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM 162 P DE PT P++ YG SKLA E +Y+ Y + A Y +++G +M Sbjct: 147 PYDEQHPTTPVSPYGASKLAAERYACAYSEVYDLSTVALRYFTVYGPRMRPNM 199 >gi|254478555|ref|ZP_05091929.1| dTDP-glucose 4,6-dehydratase [Carboxydibrachium pacificum DSM 12653] gi|214035484|gb|EEB76184.1| dTDP-glucose 4,6-dehydratase [Carboxydibrachium pacificum DSM 12653] Length = 350 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DSI- 91 K+ S D ++N AA + VD++ +PEI N G + AA DS Sbjct: 64 KELVEEIFSQDIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGDSFK 123 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + +STD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 124 EGKKFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTY 176 >gi|209550573|ref|YP_002282490.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536329|gb|ACI56264.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 338 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLS 108 PD++I+ AA V + + PE N EG+ I + A + I + + ST ++ + Sbjct: 76 KPDILIHLAAQAGVRYSLENPEAYLRSNVEGSWNIMEIARRVEIRHLMLASTSSIYGANA 135 Query: 109 RTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E + PL IY +K + E SY + + I TA+ ++++G Sbjct: 136 TVPFHETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYG 184 >gi|83859878|ref|ZP_00953398.1| dTDP-D-glucose-4,6-dehydratase [Oceanicaulis alexandrii HTCC2633] gi|83852237|gb|EAP90091.1| dTDP-D-glucose-4,6-dehydratase [Oceanicaulis alexandrii HTCC2633] Length = 290 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-------GIPCIYISTDYV 103 PDVI + AA T VD++ D + N G + +AA + +++STD V Sbjct: 20 PDVIFHAAAETHVDRSIDAATDFVTTNVIGTFELLEAARDWRDTYPERKVTFVHVSTDEV 79 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 F L T DE SP P + Y +K + + V ++ Y Sbjct: 80 FGDLHDTGQFDEASPYAPSSPYSATKASSDHLVRAWARTY 119 >gi|229816868|ref|ZP_04447150.1| hypothetical protein BIFANG_02116 [Bifidobacterium angulatum DSM 20098] gi|229785884|gb|EEP21998.1| hypothetical protein BIFANG_02116 [Bifidobacterium angulatum DSM 20098] Length = 340 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ A+ + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 81 DAIVHYASESHNDNSIADPEPFLRTNVEGTFRLLEAVREHGIRYHHVSTDEVYGDLALDD 140 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y I T Sbjct: 141 PARFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIRAT 179 >gi|42526947|ref|NP_972045.1| epimerase/dehydratase, putative [Treponema denticola ATCC 35405] gi|41817262|gb|AAS11956.1| epimerase/dehydratase, putative [Treponema denticola ATCC 35405] Length = 329 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 10/110 (9%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSI 91 DID LK + LS S D +IN AA D EP+ + +N +GA + K + Sbjct: 49 DIDSLKKE------LSSSLDCVINLAAEHRDDV---EPKSLYDEVNVDGAENVCKVCSEL 99 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 GI I ++ G + +E N N YG++K E K ++ N Sbjct: 100 GIKKIIFTSSVAVYGFAPLNTNETGKINYFNDYGRTKWLAEGKYRAWIEN 149 >gi|85705809|ref|ZP_01036906.1| UDP-glucose 4-epimerase [Roseovarius sp. 217] gi|85669799|gb|EAQ24663.1| UDP-glucose 4-epimerase [Roseovarius sp. 217] Length = 327 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F ++ P +++ AA + V ++ P + + N G+ ++ +AA + G + Sbjct: 51 DLTDRARLDQVFAAYQPVAVMHFAALSQVGESMQNPGLYWHNNVAGSLSLMQAAVAAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + +DE P+N YG SK A E+ + + Y + + Y Sbjct: 111 DLVFSSTCATYGDQDNVVLDETCAQFPINAYGASKRAIEDMLRDFEGAYGLRHVIFRY 168 >gi|282851767|ref|ZP_06261130.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri 224-1] gi|311110584|ref|ZP_07711981.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri MV-22] gi|19550669|gb|AAL91481.1|AF479753_2 putative dTDP-glucose 4,6-dehydratase RmlB [Lactobacillus gasseri] gi|282557009|gb|EFB62608.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri 224-1] gi|311065738|gb|EFQ46078.1| dTDP-glucose 4,6-dehydratase [Lactobacillus gasseri MV-22] Length = 345 Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDIRDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|330810642|ref|YP_004355104.1| UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378750|gb|AEA70100.1| UDP-glucuronate 5 -epimerase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDL+ F + PDV+I+ AA V + + P+ N G I + + Sbjct: 61 IDLVDAPAIDELFQTRRPDVVIHLAAQAGVRYSLENPQAYVDSNITGFLNILENCRRYPV 120 Query: 94 P-CIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 IY S+ V+ RTP + + +PL++Y SK A E SY++ + I LR Sbjct: 121 KHLIYASSSSVYGANPRTPYSVQDNVDHPLSLYAASKKANELMAHSYSHLFGIPCTGLRF 180 Query: 148 AWVYSIFG 155 VY +G Sbjct: 181 FTVYGPWG 188 >gi|313124558|ref|YP_004034817.1| dtdp-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281121|gb|ADQ61840.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 345 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDICDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|307823494|ref|ZP_07653723.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] gi|307735479|gb|EFO06327.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum SV96] Length = 326 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRT 110 DVI + AA A+ + P+ N +G I +AA D+ I+ ST V+ Sbjct: 73 DVIYHLAALIAIPYSYVAPDSYVDTNIKGTLNICQAALDNQVQRVIHTSTSEVYGTAQYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 PIDE P P + Y SK+A + S+ N + + L A ++ +G Sbjct: 133 PIDEKHPMQPQSPYSASKIAADAMAMSFYNAFELPLTIARPFNTYG 178 >gi|300812681|ref|ZP_07093091.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496341|gb|EFK31453.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 345 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDICDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|119478184|ref|ZP_01618240.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2143] gi|119448693|gb|EAW29937.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2143] Length = 336 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 7/140 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 ++ L G+N + +LS+ V+++ RV ID+ + + F D + Sbjct: 18 IELLGAGHNVIVVDNLSNSSYEALRRVEEITGQRVKFHQIDICDKEALETVFRGNPIDAV 77 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPID 113 I+ A AV ++ D+P + + N G + + ++ S+ V+ + PI+ Sbjct: 78 IHFAGLKAVGESVDKPYLYYHNNVHGTLVLCDVMSRHEVFNLVFSSSATVYGDPASVPIN 137 Query: 114 EFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL EE Sbjct: 138 ESFPLSATNPYGRSKLMIEE 157 >gi|89068457|ref|ZP_01155854.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] gi|89045876|gb|EAR51936.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] Length = 303 Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 18/195 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR--PDIDLLKPKD---FASFFLSF 49 M LV G G I +L + +D ++ R GR P++ +L +D Sbjct: 1 MTVLVTGGAGLIGMALRARLARDGRAVVATDMSRHGRDDPELVVLPLQDGEALERLARER 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 + II+ A + A P +N + + A + + + S+ V+ Sbjct: 61 GVEAIIHCGAISGPMHAPGRPLEVVDVNIRASAVLMDIARRLEMRRFVMCSSIGVYGNAG 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF--GSNFLLSM 162 I E P +P ++YG SK+AG+ + + Y V LR A VY + G L M Sbjct: 121 PGRIGEDLPLHPTSVYGASKVAGDALLDGFAAEYGLDGVGLRIARVYGPYRRGDCLLRQM 180 Query: 163 LRLAKERREISVVCD 177 + A R + CD Sbjct: 181 VDDALAGRPSEIACD 195 >gi|226950131|ref|YP_002805222.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] gi|226841481|gb|ACO84147.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A2 str. Kyoto] Length = 354 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---------GIPCI 96 F + D IIN AA + VD++ EP+I N G + A G + Sbjct: 73 FKQYDIDYIINFAAESHVDRSIQEPQIFVETNVLGTVNLLNTAKKYWIFNDVFREGKKYL 132 Query: 97 YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L ++ E +P +P + Y SK + + V SY + Y Sbjct: 133 QVSTDEVYGSLGKSGYFTEDTPLDPHSPYSASKASADLIVRSYYDTY 179 >gi|171912019|ref|ZP_02927489.1| UDP-glucose 4-epimerase (UDP-galactose-4-epimerase) [Verrucomicrobium spinosum DSM 4136] Length = 338 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 + +++ RV + DL + F P+ +++ AAY V ++ ++P + N Sbjct: 43 EALDLERVTLVEGDLGDAELMDRVFAEHQPEAVLHFAAYAFVGESVEQPLKYYQNNLTAP 102 Query: 82 GAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 A+ +A G I+ ST + P+DE P P+N YG SKL Sbjct: 103 LALLEAMKKHGTRRFIFSSTCATYGNPQYMPMDENHPQVPVNPYGASKL 151 >gi|326391868|ref|ZP_08213380.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter ethanolicus JW 200] gi|325992086|gb|EGD50566.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter ethanolicus JW 200] Length = 349 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 33/175 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGR----------------PDIDLLK--- 38 MK LV G G I + + +D +II + + P+ +K Sbjct: 1 MKILVTGGAGFIGSNFIKYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDI 60 Query: 39 -PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DS 90 K+ S D ++N AA + VD++ +PEI N G + AA DS Sbjct: 61 CDKELVEEIFSQDIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGDS 120 Query: 91 I--GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + +STD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 121 FKEGKKFLQVSTDEVYGSLGETGYFTENTPLDPHSPYSSSKAAADLIVKAYYDTY 175 >gi|300853755|ref|YP_003778739.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] gi|300433870|gb|ADK13637.1| dTDP glucose 4, 6-dehydratase [Clostridium ljungdahlii DSM 13528] Length = 351 Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 22/124 (17%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F + D +IN AA + VD++ +PE+ N G A+ A + Sbjct: 60 DICDREKLQQLFEKYDIDYVINFAAESHVDRSIRDPEVFVKTNVLGTVALLDTAKNAWTL 119 Query: 92 ------GIPCIYISTDYVFDGL-------SRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + +STD V+ L +TP+D SP Y SK + + V +Y Sbjct: 120 EGEFKQGKKYLQVSTDEVYGSLGKEGYFTEKTPLDSHSP------YSSSKASADLMVKAY 173 Query: 139 TNNY 142 + Y Sbjct: 174 FDTY 177 >gi|258654969|ref|YP_003204125.1| UDP-glucose 4-epimerase [Nakamurella multipartita DSM 44233] gi|258558194|gb|ACV81136.1| UDP-glucose 4-epimerase [Nakamurella multipartita DSM 44233] Length = 322 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 20/157 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII---RVGRPD----------IDLLKPKDFAS 44 MK LV+G G I ++ + + DV ++ G D ID+ + Sbjct: 1 MKALVVGGAGYIGSVVTRLLLAQGHDVTVLDDCSTGHADSVPTGVPFHQIDITA---AGT 57 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYV 103 + D +++ AA + V ++ P + N G A+ A +P ++ ST Sbjct: 58 VLAADRYDAVLHFAAKSLVGESVARPAPYWHTNVGGTRALLDAITEHHVPTLVFSSTAAT 117 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + PI E +PT P N YG +KLA + + + T Sbjct: 118 YGEPDTIPITETAPTRPGNTYGATKLAVDMMITNQTT 154 >gi|258516017|ref|YP_003192239.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257779722|gb|ACV63616.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 311 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 +YIS+ V+ TPIDE P P+ ++G KL+GE T ++ VILR A +Y Sbjct: 114 VYISSIAVYGNQLYTPIDERHPLEPVLLHGALKLSGENFCRVLTKSHGLRAVILRVADIY 173 >gi|86359564|ref|YP_471456.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] gi|86283666|gb|ABC92729.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] Length = 327 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 3/147 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ P I++ AA Sbjct: 20 CLDLANKGYRPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + GI S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRT 147 +N YG++K E+ +A Y + Y LR+ Sbjct: 140 INPYGRTKYIVEQALADY-DQYKGLRS 165 >gi|150019563|ref|YP_001311817.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] gi|149906028|gb|ABR36861.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] Length = 339 Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ F PD+I+N AA + VD++ + PEI N G + A GI Sbjct: 58 IDIADRDAVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIIGTAVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L PID F+ P++ Sbjct: 118 KRYHQVSTDEVYGDL---PIDRPDLFFTEETPIH 148 >gi|241761598|ref|ZP_04759685.1| dTDP-glucose 4,6-dehydratase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373906|gb|EER63439.1| dTDP-glucose 4,6-dehydratase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 350 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 11/126 (8%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +I++ + F + PD +++ AA + VD++ ++PE N G + + Sbjct: 51 RYRHENININNTLELDKIFEKYHPDAVMHLAAESHVDRSIEKPEKFIETNILGTYNLLEC 110 Query: 88 ADSIG---------IPCIYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + +ISTD VF L + P SP NP + Y SK + + V Sbjct: 111 SRKYWEKLNKSKKIFKFHHISTDEVFGHLDINDKPFTRQSPYNPRSPYSASKASSDHLVR 170 Query: 137 SYTNNY 142 ++ + Y Sbjct: 171 AWRDTY 176 >gi|114566251|ref|YP_753405.1| NAD dependent epimerase/dehydratase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337186|gb|ABI68034.1| NAD dependent epimerase/dehydratase family protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 337 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 9/94 (9%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 D P AF +N G + +A + G+ +Y S+ V+ P+ E P N N YG Sbjct: 94 DYPRSAFEVNIGGTFNVLEACINNGVKRLVYSSSASVYGDAVEEPMTEDHPYNNNNFYGA 153 Query: 127 SKLAGEEKVASYTN--------NYVILRTAWVYS 152 +K+AGE + + NYV LR VY Sbjct: 154 TKIAGEHMARALYHRYKGESNFNYVGLRYMNVYG 187 >gi|307265778|ref|ZP_07547329.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919173|gb|EFN49396.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter wiegelii Rt8.B1] Length = 350 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DSI- 91 K+ S D ++N AA + VD++ +PEI N G + AA DS Sbjct: 64 KELVEEIFSQDIDYVVNFAAESHVDRSIMDPEIFVKTNVLGTVTLLNAAKKAWEEGDSFK 123 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + +STD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 124 EGKKFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTY 176 >gi|238897423|ref|YP_002923100.1| UDP-glucose 4-epimerase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465178|gb|ACQ66952.1| UDP-glucose 4-epimerase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 320 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE-IAFSINAEGAGAIAKAADSIGI 93 D+ +P L D+IIN +A + EP+ + + +N +GA + AA+ + I Sbjct: 50 DVTQPSSLDKTLLGI--DMIIN---LSAEHQDNVEPKSLYYDVNVQGAKNLCDAAERLNI 104 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + ++ G E +P N YGKSKLA E+ Sbjct: 105 QHMVFTSSVAVYGFVENETGEDGAYHPFNDYGKSKLAAEQ 144 >gi|254442580|ref|ZP_05056056.1| hypothetical protein VDG1235_813 [Verrucomicrobiae bacterium DG1235] gi|198256888|gb|EDY81196.1| hypothetical protein VDG1235_813 [Verrucomicrobiae bacterium DG1235] Length = 352 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 35/155 (22%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N +++Q LS+ +++I RP + DLLK + P+ I++ AA + D+A Sbjct: 51 NQKRLSQKLSNFHHHEIDI--RNRPQVLDLLK---------TLKPNAIVHAAAQPSHDRA 99 Query: 67 EDEPEIAFSINAEGAGAIAKAA--DSIGIPCIYISTDYVF-DGLSRTPIDE------FSP 117 P F NA G + +AA + P I++ST+ V+ D +R P+ E F+ Sbjct: 100 AKIPFDDFDTNAGGTLNLLEAARQHAPDAPFIHMSTNKVYGDAPNRIPLVEHKTRYDFAD 159 Query: 118 TNPLN--------------IYGKSKLAGEEKVASY 138 + N ++G SK+AG+ V Y Sbjct: 160 STYQNGIPESFTIDQSKHSLFGASKVAGDVMVQEY 194 >gi|124485719|ref|YP_001030335.1| hypothetical protein Mlab_0897 [Methanocorpusculum labreanum Z] gi|124363260|gb|ABN07068.1| NAD-dependent epimerase/dehydratase [Methanocorpusculum labreanum Z] Length = 337 Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 DL + + F + PD+++N AA V + D P++ N G I +A Sbjct: 64 DLADKSEVENVFTKYKPDIVVNLAAQAGVRYSIDNPQVYIDSNIIGFFNILEACRHHPAE 123 Query: 94 PCIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTA 148 IY S+ V+ +TP + + P+++Y +K + E +Y++ Y I LR Sbjct: 124 HLIYASSSSVYGNQEKTPFSTDDDVSRPISLYAATKKSNELMAYTYSHLYGIPTTGLRFF 183 Query: 149 WVYSIFG 155 VY +G Sbjct: 184 TVYGPYG 190 >gi|238765343|ref|ZP_04626268.1| dTDP-glucose 4,6-dehydratase [Yersinia kristensenii ATCC 33638] gi|238696430|gb|EEP89222.1| dTDP-glucose 4,6-dehydratase [Yersinia kristensenii ATCC 33638] Length = 325 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 +D+ + F + PDV+++ AA + VD++ D P N G + +AA Sbjct: 28 VDICDRTELDRVFAQYRPDVVMHLAAESHVDRSIDGPAAFIETNVLGTYQMLEAARHYWQ 87 Query: 89 -----DSIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 88 QLSAEGKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 147 Query: 142 Y 142 Y Sbjct: 148 Y 148 >gi|225849959|ref|YP_002730193.1| NAD-dependent epimerase/dehydratase family protein [Persephonella marina EX-H1] gi|225646304|gb|ACO04490.1| NAD-dependent epimerase/dehydratase family protein [Persephonella marina EX-H1] Length = 334 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F SF D ++N AA V + + P + NA+G + + GI + +++ Sbjct: 76 LFDSFQFDAVLNLAARAGVRYSMENPHVYLQTNAQGTLNLLEMMKDHGIKKMVLASTSSL 135 Query: 105 DGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYV 143 P E P N P++ Y SK A E V +YT +Y+ Sbjct: 136 YAGQPMPFKEDLPVNTPISPYAASKKAAE--VMAYTYHYL 173 >gi|154151291|ref|YP_001404909.1| dTDP-glucose 4,6-dehydratase [Candidatus Methanoregula boonei 6A8] gi|153999843|gb|ABS56266.1| dTDP-glucose 4,6-dehydratase [Methanoregula boonei 6A8] Length = 354 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 11/102 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------GIPCIYISTD 101 D IIN AA T VD++ +P++ N G + AA +I G + +STD Sbjct: 78 DGIINFAAETHVDRSIHDPQVFLKTNILGTHVLLDAAKTIWHTKEGGWEDGKKFLQVSTD 137 Query: 102 YVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L + E +P +P + Y SK + + V +Y + Y Sbjct: 138 EVYGTLGPSGYFTETTPLDPHSPYSASKASADLVVKAYHDTY 179 >gi|148380056|ref|YP_001254597.1| UDP-glucose epimerase [Clostridium botulinum A str. ATCC 3502] gi|153933389|ref|YP_001384353.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153934595|ref|YP_001387890.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|148289540|emb|CAL83641.1| putative UDP-glucose epimerase [Clostridium botulinum A str. ATCC 3502] gi|152929433|gb|ABS34933.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152930509|gb|ABS36008.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] Length = 307 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P ++N G I + + +Y S+ V+ PIDE + Sbjct: 76 IDVQKSITNPIFDSNVNVCGTINIINNCVNYNVKKIVYSSSAAVYGYPGYLPIDEKNGIM 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRLFSNLNNLDFTILRYANVYGI 173 >gi|124515847|gb|EAY57356.1| UDP-glucose 4-epimerase [Leptospirillum rubarum] Length = 323 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 3/112 (2%) Query: 27 IRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 ++ G P + D+ P+ S F + + +I+ AA V ++ +P + N G I Sbjct: 41 VQTGAPLVVGDIRDPRALTSLFSHYPIEAVIHFAAAIEVGESVQDPLKYWDNNLNGTLRI 100 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + S G+ I ST V+ S PI E +P N YG++K A E V Sbjct: 101 LETMRSFGVRNLILSSTAAVYSPKSDGPITEEDRIDPQNPYGETKAAAERLV 152 >gi|119720075|ref|YP_920570.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] gi|119525195|gb|ABL78567.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] Length = 315 Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust. Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 17/128 (13%) Query: 20 CVQDVEIIR---VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 + DVE +R R D++ A F + +P+V + +P F Sbjct: 48 VLGDVEFVRGDVRSREDVEKALRGVDAVFHFAANPEVRVG------------DPREHFEH 95 Query: 77 NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEK 134 N + +A +G+ ++ S+ V+ + P +++ P P+++YG SKLA E Sbjct: 96 NVFATFNVLEAMRRLGVSDIVFASSSTVYGDAEKLPTPEDYGPLKPISVYGASKLACEAL 155 Query: 135 VASYTNNY 142 ++SYT+ + Sbjct: 156 ISSYTHTF 163 >gi|237736552|ref|ZP_04567033.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] gi|229420414|gb|EEO35461.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] Length = 274 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 32/227 (14%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 K L+IG+ G Q++ + + E+ R +D ++ Sbjct: 4 KILIIGSKGMAGQTIRKYLLSKGYEVYCTFRKGEAEKKEKEFHLDAFDKEELNKILKEVK 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P+ +IN AE+ P+IA +N + + + I+I+TD VF G Sbjct: 64 PNFVINCVG-ILNQFAEENPDIAIYVNGYFPHYLDRLSKEYNYKLIHITTDCVFSGKKGN 122 Query: 111 PID-EFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLLSMLRLAK 167 ++ +F + YG+SK GE NN + RT+ V N + K Sbjct: 123 YVENDFRDADSY--YGRSKAIGE------VNNDRTLTFRTSIVGPDENENGIGLFKWFTK 174 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS-DTSLRGIFHM 213 + +I + F + + L++A+A IE S +T+L G++H+ Sbjct: 175 QEGKIKGYSNVFWSGVTTLELAKA--------IEASFETNLTGLYHL 213 >gi|225387306|ref|ZP_03757070.1| hypothetical protein CLOSTASPAR_01058 [Clostridium asparagiforme DSM 15981] gi|225046620|gb|EEG56866.1| hypothetical protein CLOSTASPAR_01058 [Clostridium asparagiforme DSM 15981] Length = 346 Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 79/207 (38%), Gaps = 28/207 (13%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I N +I + S CV + G DL PD I N AA + V Sbjct: 37 ISNTARIDHLIESQCV----TLHEG----DLTDTSSLIRIIGLVQPDEIYNLAAQSHVQI 88 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIP--C-IY-ISTDYVFDGLSRTPIDEFSPTNPL 121 + D PE + ++A G + +A +G+ C IY ST +F + P E +P +P Sbjct: 89 SFDVPEYSGEVDAIGVLRLLEAVRILGLSKTCKIYQASTSELFGKVEEVPQRETTPFHPY 148 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + Y +K G V Y + Y +F N +L ERR + F T Sbjct: 149 SPYAVAKQYGFWIVKEYRD---------AYGMFAVNGIL--FNHESERR-----GENFVT 192 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR 208 L +AR + L + SLR Sbjct: 193 RKITLAVARIACGLQEKLYLGNMDSLR 219 >gi|330505514|ref|YP_004382383.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina NK-01] gi|328919800|gb|AEB60631.1| dTDP-glucose 4,6-dehydratase [Pseudomonas mendocina NK-01] Length = 353 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 35/177 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--------IIRVGRPD---------------IDLL 37 M+ L+ G G I +L+ +QD E + G + D+ Sbjct: 1 MRVLITGGAGFIGSALTRHLIQDTEHEVLNLDKLTYAGNLESLLEIAASPRYRFVQADIA 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IGIPC 95 + A+ F PD I++ AA + VD++ D P N G ++ ++ + +G+ Sbjct: 61 DAERVAATLSEFQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYSLLESTRAYWLGLNT 120 Query: 96 I--------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +ISTD V+ L E +P P + Y SK A + V ++ Y Sbjct: 121 VRKAAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTY 177 >gi|313632019|gb|EFR99132.1| UDP-glucose 4-epimerase [Listeria seeligeri FSL N1-067] Length = 327 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 24/167 (14%) Query: 37 LKPKDF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ KDF +S F + D +++ AA + V ++ +EP + N G + + + G+ Sbjct: 52 IRDKDFLSSVFDRETVDGVMHFAASSLVGESMEEPLQYLNNNVYGTQILLEVMEQFGVKN 111 Query: 96 IYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV 150 I S+ G + PI E TNP + YG +KL E+ + +Y YV LR Sbjct: 112 IVFSSSAATYGEPEQVPIIESMSTNPESTYGDTKLIMEKMMKWCDKAYGVKYVALR---Y 168 Query: 151 YSIFG--------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 +++ G S+ + +L++A +RE +++ D + TP Sbjct: 169 FNVAGAKSDGTIGEDHQPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|306822148|ref|ZP_07455530.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium ATCC 27679] gi|304554530|gb|EFM42435.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium ATCC 27679] Length = 340 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 141 PAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTT 179 >gi|206602091|gb|EDZ38573.1| UDP-glucose 4-epimerase [Leptospirillum sp. Group II '5-way CG'] Length = 323 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 3/112 (2%) Query: 27 IRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 ++ G P + D+ P+ S F + + +I+ AA V ++ +P + N G I Sbjct: 41 VQTGAPLVVGDIRDPRALTSLFSHYPIEAVIHFAAAIEVGESVQDPLKYWDNNLNGTLRI 100 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + S G+ I ST V+ S PI E +P N YG++K A E V Sbjct: 101 LETMRSFGVRNLILSSTAAVYSPKSDGPITEEDRIDPQNPYGETKAAAERLV 152 >gi|331649613|ref|ZP_08350695.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] gi|330908090|gb|EGH36609.1| dTDP-glucose 4,6-dehydratase [Escherichia coli AA86] gi|331041483|gb|EGI13631.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M605] Length = 355 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIGIPCI----------YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWTALTEDKKSAFRFHHISTDEVYGDLHSTNDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|150400811|ref|YP_001324577.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] gi|150013514|gb|ABR55965.1| NAD-dependent epimerase/dehydratase [Methanococcus aeolicus Nankai-3] Length = 302 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 19/174 (10%) Query: 1 MKCLVIGNNGQIAQS--------------LSSMCVQDVEIIRVGRPDIDLLKPKDFASFF 46 MK L+ G G I L ++ +++ I+ +I+ + K Sbjct: 1 MKVLITGGAGFIGSHIVDKFLENNHEVVVLDNLTTGNLDNIKRNNDNIEFIN-KSIRDND 59 Query: 47 LSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYV 103 L+F DV+I+ AA V + + P + IN G I + G+ I S V Sbjct: 60 LNFEDIDVVIHHAAQINVRTSVENPVLDGDINILGLINILEKIKKYGVKKIIFASSGGAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGS 156 + P+DE P++ YG SK GEE + Y Y I T YS +FG Sbjct: 120 YGEPEYMPVDENHVGAPMSPYGVSKFCGEEYIKLYNRLYGIDYTILRYSNVFGE 173 >gi|78222551|ref|YP_384298.1| polysaccharide biosynthesis protein CapD [Geobacter metallireducens GS-15] gi|78193806|gb|ABB31573.1| Polysaccharide biosynthesis protein CapD [Geobacter metallireducens GS-15] Length = 646 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 24/129 (18%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F F P+V+ + AAY V E P A + N G +A AA G+ + ISTD Sbjct: 357 FDEFQPEVVFHAAAYKHVPMMEYNPVEAVTNNIGGTRTLANAAHRFGVKNFVMISTD--- 413 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLL 160 NP NI G SK E V N+ +R ++ GSN Sbjct: 414 -----------KAVNPTNIMGASKRVAEMYVQGLARKSRTNFTTVRFG---NVLGSNG-- 457 Query: 161 SMLRLAKER 169 S++ L KE+ Sbjct: 458 SVIPLFKEQ 466 >gi|67925074|ref|ZP_00518452.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera watsonii WH 8501] gi|67853074|gb|EAM48455.1| similar to Nucleoside-diphosphate-sugar epimerases [Crocosphaera watsonii WH 8501] Length = 301 Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 7/136 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC---VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + +++G++G I +LS V+ VE+I PD DL + D F L+ D Sbjct: 13 RVIIMGHSGFIGSNLSKFFNNHVRGVEVIGRSLPDFDLTQESDV--FSLASLCDQQTAIV 70 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS 116 +A+ + + AFS N + + + + + IY S+ V+ + + T I E + Sbjct: 71 MCSAIKRQLGDTLDAFSQNVQMVSNLCRLLEKYPVKRLIYFSSAAVYGEDIHNTNITETT 130 Query: 117 PTNPLNIYGKSKLAGE 132 P +P + YG +K E Sbjct: 131 PVHPTSYYGGAKYTSE 146 >gi|330508401|ref|YP_004384829.1| dTDP-glucose 4,6-dehydratase [Methanosaeta concilii GP-6] gi|328929209|gb|AEB69011.1| dTDP-glucose 4,6-dehydratase [Methanosaeta concilii GP-6] Length = 333 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--DSIGIPCIYISTDYVFDGLSR 109 D+++N AA T VD++ P+ N G + +A + + + ISTD V+ + R Sbjct: 74 DLVVNFAAETHVDRSISRPDSFLHSNVNGVFCLLEAIRDHNPSVRYVQISTDEVYGDILR 133 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E S P + Y SK AG+ V +Y Y Sbjct: 134 GSSTEDSTLRPSSPYSASKAAGDVFVLAYARTY 166 >gi|170747543|ref|YP_001753803.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170654065|gb|ACB23120.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 311 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + E P P + YG+SKL E +A ++V LR VY + ++LRLA+ Sbjct: 131 VGEGDPPRPTDAYGRSKLEAEAALAEIGLDWVALRPVLVYGAGVKGNMAALLRLAR 186 >gi|118467903|ref|YP_885894.1| dTDP-glucose 4,6-dehydratase [Mycobacterium smegmatis str. MC2 155] gi|310947298|sp|A0QSK6|RMLB_MYCS2 RecName: Full=dTDP-glucose 4,6-dehydratase gi|118169190|gb|ABK70086.1| dTDP-glucose 4,6-dehydratase [Mycobacterium smegmatis str. MC2 155] Length = 331 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D +++ AA T VD A +PE N G I +A + ++STD V+ L + Sbjct: 72 DAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHVSTDEVYGDLELDN 131 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +E +P NP + Y +K A + V ++ +Y + T Sbjct: 132 PARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRAT 170 >gi|85860455|ref|YP_462657.1| UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase [Syntrophus aciditrophicus SB] gi|85723546|gb|ABC78489.1| UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase [Syntrophus aciditrophicus SB] Length = 637 Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 F +++P ++ + AAY V E P+ A +N G A+A+AA + G+ I ISTD Sbjct: 370 FRAYAPRIVFHAAAYKHVPMMESNPKEAVKVNIFGTHALAEAAKNYGVEKFIMISTD 426 >gi|325507934|gb|ADZ19570.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Clostridium acetobutylicum EA 2018] Length = 265 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%) Query: 92 GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAW 149 G + ST VFDG TP ++ P + N YGK K+A E K+ +N ILR Sbjct: 88 GGKLYFFSTTNVFDGNLNTPHFEDDIPISQTN-YGKYKIACENKLIKILDDNCCILRIPQ 146 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 V+ S + ++L + EI++ F T + IA+ + I ++ +LRG Sbjct: 147 VWGK-TSKRMANLLNSLENNEEITLYPKLFINTTIDVIIAKQLYYIINH-------NLRG 198 Query: 210 IFHMTA 215 IFH+T+ Sbjct: 199 IFHLTS 204 >gi|325963122|ref|YP_004241028.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter phenanthrenivorans Sphe3] gi|323469209|gb|ADX72894.1| nucleoside-diphosphate-sugar epimerase [Arthrobacter phenanthrenivorans Sphe3] Length = 294 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 44/258 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L+ G +G++ ++ + + +V + RP + KP+ + ++ D+ Sbjct: 1 MKVLITGAHGKVGRAATQAMIDAGHEVLTTDLTRPGFER-KPEGTPKYMMA---DLTDAG 56 Query: 58 AAYTAVDKAE-------------DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 AY+ V + P + F N + +AA G+ +YIS++ V Sbjct: 57 EAYSVVKGVDAVVHVAAIPEPTGHPPHVVFQTNLMATFNVLEAAIRFGVKRFVYISSETV 116 Query: 104 --FDGLSR------TPIDEFSPTNPLNIYGKSKLAGEE----KVASYTNNYVILRTAWVY 151 F R P+DE P P + Y SK GE+ +A + +R +WV Sbjct: 117 PGFFFPERDFLPDYAPVDEEHPIRPQDPYALSKHFGEQLMDAAIARSDIRCISIRPSWVQ 176 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 F NF + L + R+ SV+ + +A AI+ L SD +F Sbjct: 177 --FEGNFETN---LGPQVRDASVLSPNLWSYVDVYDLADAIV-----LATESDLPGHEVF 226 Query: 212 HMTADGGPVSWADFAEYI 229 ++ + V DFAE + Sbjct: 227 YIASPDN-VGGHDFAEVL 243 >gi|169351598|ref|ZP_02868536.1| hypothetical protein CLOSPI_02378 [Clostridium spiroforme DSM 1552] gi|169291820|gb|EDS73953.1| hypothetical protein CLOSPI_02378 [Clostridium spiroforme DSM 1552] Length = 341 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA + VD++ +PEI N G + AA G+ + +STD V+ L Sbjct: 76 DIVVNFAAESHVDRSITDPEIFVKTNVMGTTTLLDAAKEFGVKRYHQVSTDEVYGDL--- 132 Query: 111 PIDE----FSPTNPLN 122 P+D F+ T PL+ Sbjct: 133 PLDRPDLFFTETTPLH 148 >gi|83591594|ref|YP_425346.1| NAD-dependent epimerase/dehydratase [Rhodospirillum rubrum ATCC 11170] gi|83574508|gb|ABC21059.1| NAD-dependent epimerase/dehydratase [Rhodospirillum rubrum ATCC 11170] Length = 329 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 20/155 (12%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + ++ + +D ++ VGR D+DL + + ++ + PD ++ AA Sbjct: 23 RVWVAGHRGLVGGAVVRRLAREDCAVLCVGREDLDLTRQQAVEAWMEANRPDAVVMAAAL 82 Query: 61 TAVDKAEDEPEIAF----------SINAEGAGAIAKAADSIGIPCIY---ISTDYVFDGL 107 KA D F I+A + K +G CIY ++ D L Sbjct: 83 VGGIKANDRRSAEFIHQNLAVQTNIIHAAWQAGVGKVL-FLGSSCIYPRDVAQPMREDAL 141 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P++ PTN Y +K+AG +Y Y Sbjct: 142 LSGPLE---PTN--QWYAIAKIAGIRMAQAYRRQY 171 >gi|42518778|ref|NP_964708.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|41583064|gb|AAS08674.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] Length = 330 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ AAY+ V ++ +P + N G ++ +A D + + S+ G+ +T Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAMDDAKVKYLVFSSSAATYGIPKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P +P+N YG++K+ E+ Sbjct: 128 PITEDTPLDPINPYGETKMMMEK 150 >gi|283456704|ref|YP_003361268.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium Bd1] gi|283103338|gb|ADB10444.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium Bd1] Length = 328 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 69 DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 128 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 129 PAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTT 167 >gi|237732094|ref|ZP_04562575.1| UDP-N-acetylglucosamine 4-epimerase [Citrobacter sp. 30_2] gi|226907633|gb|EEH93551.1| UDP-N-acetylglucosamine 4-epimerase [Citrobacter sp. 30_2] Length = 331 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 31/62 (50%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A + + I ++ GL++T DE P +P N YGKSK Sbjct: 80 LYYDVNVQGTRNVLAAMEKNDVKNIIFTSSVAVYGLNKTNPDENHPHDPFNHYGKSKWQA 139 Query: 132 EE 133 EE Sbjct: 140 EE 141 >gi|289209653|ref|YP_003461719.1| UDP-glucose 4-epimerase [Thioalkalivibrio sp. K90mix] gi|288945284|gb|ADC72983.1| UDP-glucose 4-epimerase [Thioalkalivibrio sp. K90mix] Length = 350 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------------GRPDI---DLLKPKDFASF 45 MK LV G G I + + D + V G + D+ + Sbjct: 1 MKILVTGGAGYIGSHVVRQLLADGHDVVVYDNLSTGHRWAIGHAALIVGDMADRQRLHGV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 ++ D +++ AA V ++ +P + N + + + G+ ++ ST V+ Sbjct: 61 LADYAFDGVLHFAARIVVPESLADPLGYYGSNTRNTLNLLEGCQATGVRFLVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 P+DE SP P+N YG SK+ E +A + YV LR Sbjct: 121 GIPENNPVDETSPLLPINPYGASKVMSERMIADFGQASDLRYVCLR 166 >gi|154488171|ref|ZP_02029288.1| hypothetical protein BIFADO_01743 [Bifidobacterium adolescentis L2-32] gi|154083644|gb|EDN82689.1| hypothetical protein BIFADO_01743 [Bifidobacterium adolescentis L2-32] Length = 340 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D + +PE N EG + +AA + +ISTD V+ L+ Sbjct: 81 DAIVHFAAESHNDNSIFDPEPFIRTNVEGTMRLLEAARKYDVRFHHISTDEVYGDLALDD 140 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 F SP P + Y SK A + V ++T Y + T Sbjct: 141 PARFGENSPYRPSSPYSASKAASDHLVRAWTRTYGLRAT 179 >gi|153864339|ref|ZP_01997274.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. SS] gi|152146165|gb|EDN72725.1| NAD-dependent epimerase/dehydratase [Beggiatoa sp. SS] Length = 327 Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 16/104 (15%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--- 151 CI+ S+ +F P+DE P P+N YG +K E+ +A Y + Y + Y Sbjct: 112 CIFSSSAAIFGEPQYVPLDEAHPKQPINPYGSTKWMVEQILADYDHAYGLKSVCLRYFNA 171 Query: 152 ------------SIFGSNFLLSMLRLAKERRE-ISVVCDQFGTP 182 + ++ + +L+ A RRE I+V + + TP Sbjct: 172 AGADPDGQLGERHVPETHLIPLVLQAASGRRESITVYGEDYDTP 215 >gi|255264193|ref|ZP_05343535.1| dTDP-glucose 4,6-dehydratase [Thalassiobium sp. R2A62] gi|255106528|gb|EET49202.1| dTDP-glucose 4,6-dehydratase [Thalassiobium sp. R2A62] Length = 347 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%) Query: 40 KDFASF---FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----- 91 +D+A F + PDV+++ AA + VD++ D P N G + +A + Sbjct: 59 RDYAQLEGVFNTHQPDVVMHLAAESHVDRSIDGPGAFIETNVMGTYNMLQATRAYWQSKD 118 Query: 92 ---GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L T + E +P +P + Y SK + + V ++ Y Sbjct: 119 RPENFRFHHISTDEVFGSLGETGMFTEDTPYDPRSPYSASKASSDHLVRAWHETY 173 >gi|238852727|ref|ZP_04643134.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 202-4] gi|238834654|gb|EEQ26884.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 202-4] Length = 330 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ AAY+ V ++ +P + N G ++ +A D + + S+ G+ +T Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAMDDAKVKYLVFSSSAATYGIPKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P +P+N YG++K+ E+ Sbjct: 128 PITEDTPLDPINPYGETKMMMEK 150 >gi|171740945|ref|ZP_02916752.1| hypothetical protein BIFDEN_00006 [Bifidobacterium dentium ATCC 27678] gi|171742179|ref|ZP_02917986.1| hypothetical protein BIFDEN_01285 [Bifidobacterium dentium ATCC 27678] gi|171277793|gb|EDT45454.1| hypothetical protein BIFDEN_01285 [Bifidobacterium dentium ATCC 27678] gi|171278999|gb|EDT46650.1| hypothetical protein BIFDEN_00006 [Bifidobacterium dentium ATCC 27678] Length = 340 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 141 PAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTT 179 >gi|116750781|ref|YP_847468.1| polysaccharide biosynthesis protein CapD [Syntrophobacter fumaroxidans MPOB] gi|116699845|gb|ABK19033.1| polysaccharide biosynthesis protein CapD [Syntrophobacter fumaroxidans MPOB] Length = 642 Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 78/204 (38%), Gaps = 35/204 (17%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F + PDV+ + AAY V E P A N G+ + K + G+ + +STD Sbjct: 365 SVFRKYRPDVVFHAAAYKHVPMLERNPWEAVFNNVRGSQVMMKLSKDYGVKRFVLVSTD- 423 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFL 159 P N+ G SK E + S+ N Y+ +R V GS Sbjct: 424 -------------KAVRPTNVMGTSKRLTELILQSFQGNGTKYMAVRFGNVVGSSGSVIP 470 Query: 160 LSMLRLAKERREISVVCDQFGTPTSAL--QIARAIIQI---AHNLIENSDTSLRGIFHMT 214 L RR+I + G P + ++ R + I A +++ G + Sbjct: 471 LF-------RRQI-----EQGGPVTVTHPEVTRYFMTIPEAAQLILQAGALGEGGEIFIL 518 Query: 215 ADGGPVSWADFAEYIFWESAERGG 238 G PV AD A+ + S ++ G Sbjct: 519 EMGTPVKIADMAQDLIRLSGKQPG 542 >gi|146412257|ref|XP_001482100.1| hypothetical protein PGUG_05863 [Meyerozyma guilliermondii ATCC 6260] gi|146393607|gb|EDK41765.1| hypothetical protein PGUG_05863 [Meyerozyma guilliermondii ATCC 6260] Length = 692 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 5/101 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DL + F S++ +I+ AA AV ++ P + N G ++ K +G Sbjct: 58 NVDLQNYDELLKVFQSYNIKGVIHFAALKAVGESTQIPLEYYENNVGGTMSLLKVMKKVG 117 Query: 93 IPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKSK 128 + I + S+ V+ +R PI E P +P N YGK+K Sbjct: 118 VKTIVFSSSATVYGDATRFENMIPIPEHCPNDPTNPYGKTK 158 >gi|160881626|ref|YP_001560594.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] gi|160430292|gb|ABX43855.1| NAD-dependent epimerase/dehydratase [Clostridium phytofermentans ISDg] Length = 285 Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 17/184 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G N I S Q D I DL DF+ + DV+ + A Sbjct: 3 KILITGANSYIGTSFEKWISQYPDDYFIETVDTRNDLWTEIDFSYY------DVVFHVAG 56 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS--RTPIDEFS 116 V + ++ + +N + IA+ A G+ +++S+ V+ S + ID + Sbjct: 57 IAHVSSDPNLEDLYYKVNRDLTIKIAQKAKDQGVKQFLFMSSIIVYGDSSCFKKVIDIRT 116 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 +P N YG SKL EE + S ++ VILR +Y G + +LAK R++ Sbjct: 117 VPSPSNAYGNSKLQAEESIKSLEDDKFKIVILRPPMIY---GRGSKGNYPKLAKAARKLP 173 Query: 174 VVCD 177 + D Sbjct: 174 IFPD 177 >gi|310789793|gb|EFQ25326.1| NAD dependent epimerase/dehydratase [Glomerella graminicola M1.001] Length = 304 Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 31/151 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MKC V + GQ+ +L + + L +P + +S PD II+ A Y Sbjct: 45 MKCDVT-DAGQVYSALHTQ--------------LHLTQPLEKSSV-----PDAIIHFAGY 84 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---------RTP 111 A D F N + +AA +GI I +++ G++ + P Sbjct: 85 ARPLLAPDNE--VFRTNIVSIHNVIEAACKLGIKKIILASSITVYGVTFAEGRRAFTQFP 142 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IDE + NP + Y SKL GE SY N + Sbjct: 143 IDETTECNPTDPYALSKLLGETVARSYANRF 173 >gi|283779730|ref|YP_003370485.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068] gi|283438183|gb|ADB16625.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068] Length = 346 Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust. Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 27/154 (17%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + ++N + E +P +A +N + +A +++S D VF Sbjct: 67 LFEKYQFAAVLNCEGTCKLKSCELDPSMARRVNITSVENLLRAMRGTSTRLVHLSIDLVF 126 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA---------------W 149 G+ I E + +P+ IYG + E+ + + + ILR + W Sbjct: 127 SGVGPGNIREDATPDPVTIYGSTMAEAEQLILTDKSEATILRISLPMGVSFNGHAGAIDW 186 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 + S F K+ R ++ D+ TPT Sbjct: 187 IQSRF------------KKHRPATLYFDELRTPT 208 >gi|227549117|ref|ZP_03979166.1| UDP-glucose 4-epimerase [Corynebacterium lipophiloflavum DSM 44291] gi|227078814|gb|EEI16777.1| UDP-glucose 4-epimerase [Corynebacterium lipophiloflavum DSM 44291] Length = 328 Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA + V ++ D P + N + A+ A + +P ++ ST + Sbjct: 66 DGVLHFAARSLVGESMDVPHEYWRDNLVTSLALLDAMRTHRVPRLVFSSTAATYGEPETV 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +PT P N YG +KLA + + SY Y + T+ Y Sbjct: 126 PITEDAPTRPTNPYGATKLAIDYAITSYCQAYGLAATSLRY 166 >gi|167841169|ref|ZP_02467853.1| NAD-dependent epimerase/dehydratase [Burkholderia thailandensis MSMB43] Length = 329 Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I++ AA T V + P N G +AA GI ++ G P Sbjct: 84 DIIVHLAANTGVVPSLQNPRADLGANVIGTFNYLEAARRHGIRRFVFASSGASTGEVEPP 143 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 I E P + YG SKLAGE ++Y + + V+LR VY Sbjct: 144 IHEEIAPRPASPYGASKLAGEAYASAYKHAFGIDTVMLRFGNVYG 188 >gi|258516005|ref|YP_003192227.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] gi|257779710|gb|ACV63604.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum acetoxidans DSM 771] Length = 333 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 3/98 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGL 107 PD + AA + V DE I + N G + +A I C + + +F Sbjct: 75 QPDECYHLAARSFVSYGLDESSI-LTTNFNGTHHLLEAICEIVPSCRVYFAGSSEMFGYA 133 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +P +EF+P P ++YG SKLAG V Y Y I Sbjct: 134 GTSPQNEFTPFYPRSMYGISKLAGYHLVNIYRKRYGIF 171 >gi|149002165|ref|ZP_01827119.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP14-BS69] gi|237649646|ref|ZP_04523898.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae CCRI 1974] gi|237822113|ref|ZP_04597958.1| putative UDP-glucose 4-epimerase [Streptococcus pneumoniae CCRI 1974M2] gi|147759974|gb|EDK66964.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP14-BS69] Length = 233 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHYAGEIVVSESIENPSKYFTANVAGRNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLIDPVNPYTETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|29827555|ref|NP_822189.1| NDP-hexose 4-ketoreductase [Streptomyces avermitilis MA-4680] gi|29604655|dbj|BAC68724.1| putative NDP-hexose 4-ketoreductase [Streptomyces avermitilis MA-4680] Length = 308 Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSP 51 M+ LV+G G + + + + ++ GR D+ +P A S +P Sbjct: 1 MRILVLGFTGYLGRHVVERLRALPGTRVLGGGRSAGAEFGIDLATARPDTLAKALASAAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAG----AIAKAADSIGIPCIYISTDYVFDGL 107 D +IN A T D +N+ G A+ +AA S + + + +Y G Sbjct: 61 DAVINCAGATGGDAV-----TLAEVNSRGPAVLCAALREAAPSARLVHLGSAAEY-GPGT 114 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 + E + T PL YG +KLAG + + + V+LR Sbjct: 115 RGIRVTESAATRPLTPYGATKLAGTITITTSGLDAVVLR 153 >gi|309802209|ref|ZP_07696317.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium JCVIHMP022] gi|308221092|gb|EFO77396.1| dTDP-glucose 4,6-dehydratase [Bifidobacterium dentium JCVIHMP022] Length = 350 Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 91 DAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 150 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 151 PAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTT 189 >gi|89068414|ref|ZP_01155817.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] gi|89046068|gb|EAR52127.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] Length = 352 Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 11/110 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIY 97 F +PD +++ AA + VD++ D P N G + +AA + G + Sbjct: 68 FAKHAPDAVMHLAAESHVDRSIDGPGDFVETNITGTYNMLEAARAWWVQAGRPEGFRFHH 127 Query: 98 ISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 +STD VF L P +F +P +P + Y SK A + V ++ Y + Sbjct: 128 VSTDEVFGSLPADPEMKFTEETPYDPRSPYSASKAASDHLVRAWHETYEL 177 >gi|322436339|ref|YP_004218551.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] gi|321164066|gb|ADW69771.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] Length = 322 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 31/172 (18%) Query: 1 MKCLVIGNNGQIAQSLS--------------SMC-------VQDVEIIRVGRPDIDLLKP 39 MK LV G G I ++S S+C + V + D LL+ Sbjct: 1 MKILVTGGAGYIGGTVSRLLLERGHEVTVFDSLCHSRRSAIAEGVTFVEGDLADSALLEK 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 A F D +++ AA ++ +PE+ F N G + +A + G ++ Sbjct: 61 TLNAGKF-----DGVLHFAALIEAGESMKQPEVYFRNNTAGTLTLLEAMLATGHNKLVFS 115 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ST + +TPI E + P N YG+SKL E + S+ Y LR Sbjct: 116 STAACYGEPEKTPITEEARLAPTNAYGESKLLSEHMMRWMHHSHGLRYAALR 167 >gi|291399278|ref|XP_002716027.1| PREDICTED: UDP-galactose-4-epimerase [Oryctolagus cuniculus] Length = 348 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 9/148 (6%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I G + +SL VQ++ +V ++D+L F S +I+ A AV + Sbjct: 39 IRGGGAMPESLRR--VQELTGRKVEFEEMDILDQAALQRLFQKHSFVAVIHFAGLKAVGE 96 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NI 123 + +P + +N G + + + G+ ++ S+ V+ P+DE PT N Sbjct: 97 SVQKPLDYYRVNLTGTIQLLEIMRTHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156 Query: 124 YGKSKLAGEEKV-----ASYTNNYVILR 146 YGKSK EE + A N V+LR Sbjct: 157 YGKSKFFIEEMIQDLCRADKAWNAVLLR 184 >gi|163743890|ref|ZP_02151261.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis 2.10] gi|161382831|gb|EDQ07229.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis 2.10] Length = 346 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + P +++ AA + V +A EP ++ N G+ + +AA + Sbjct: 70 DLSDRARLDEVFAKYQPAAVMHFAALSQVGEAMSEPGRYWTNNVGGSLTLIEAA--VAAD 127 Query: 95 C---IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 C ++ ST + +DE +P PLN YG SK A E+ + AS+ VI R Sbjct: 128 CLDFVFSSTCATYGEHDNVVLDESTPQVPLNAYGASKRAVEDILRDFGASHGLRSVIFR 186 >gi|163784870|ref|ZP_02179644.1| GDP-D-mannose dehydratase [Hydrogenivirga sp. 128-5-R1-1] gi|159879863|gb|EDP73593.1| GDP-D-mannose dehydratase [Hydrogenivirga sp. 128-5-R1-1] Length = 187 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 7/123 (5%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 +DVEI+ +DLL+ + + PD + N AA + V + ++P + ++A G Sbjct: 50 KDVEIVY-----MDLLEQSNIMRVIKNIQPDEVYNLAAQSFVGASFEQPILTSEVDAIGV 104 Query: 82 GAIAKAADSIGIPCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A + ST +F + P E +P P + YG +KL G +Y Sbjct: 105 LRLLEAIREYAPEAKFYQASTSEMFGKVQEVPQTEKTPFYPRSPYGVAKLFGHWITVNYR 164 Query: 140 NNY 142 +Y Sbjct: 165 ESY 167 >gi|149204257|ref|ZP_01881224.1| UDP-glucose 4-epimerase [Roseovarius sp. TM1035] gi|149142142|gb|EDM30189.1| UDP-glucose 4-epimerase [Roseovarius sp. TM1035] Length = 327 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 6/150 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 C + G + ++C + ++ G DL F ++ P +++ AA + Sbjct: 18 CKTLAAAGYTPVTYDNLCTGWQDAVKFGPFEQGDLTDRARLDQVFATYRPAAVMHFAALS 77 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLSRTPIDEFSPTNP 120 V ++ +P + + N G+ + +AA + G + ++ ST + +DE P Sbjct: 78 QVGESMRDPGLYWHNNVAGSLCLIQAAVAAGCLDFVFSSTCATYGDQDNVLLDEGCVQAP 137 Query: 121 LNIYGKSKLAGEEKV----ASYTNNYVILR 146 +N YG SK A E+ + A++ +VI R Sbjct: 138 INAYGASKRAIEDMLCDFGAAFGLRHVIFR 167 >gi|315039057|ref|YP_004032625.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1112] gi|312277190|gb|ADQ59830.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1112] Length = 345 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 KLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGIKRFHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F PL+ Sbjct: 128 VYGDL---PLDRPDLFFHEDTPLH 148 >gi|225021246|ref|ZP_03710438.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii ATCC 33806] gi|224945979|gb|EEG27188.1| hypothetical protein CORMATOL_01258 [Corynebacterium matruchotii ATCC 33806] Length = 342 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 36/239 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRP-DIDLLKP--KDFASFFL 47 MK LV G G + +++ ++ D+ I+ R P + L++ +D A L Sbjct: 14 MKLLVTGGAGYVGSVCATVLLEQGHDITIVDNFSTGNRDAVPANATLIEGDIRDVAGDVL 73 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + D +++ AA + V ++ + PE + N + A + G+ ++ ST + Sbjct: 74 AGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMRAHGVTNLVFSSTAATYG 133 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSN- 157 R PI E PT P N YG SKLA + + SY + + + T A Y G N Sbjct: 134 EPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGATSLRYFNVAGAYGSVGENR 193 Query: 158 -----FLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-----AHNLIENSDT 205 + +L++A R EI + D + PT R I I AH L S+T Sbjct: 194 EVETHLIPLVLQVALGHRDEIFIFGDDY--PTKDGTCIRDYIHIKDLADAHVLALESNT 250 >gi|78357230|ref|YP_388679.1| UDP-galactose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219635|gb|ABB38984.1| UDP-galactose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 327 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F + D +++ +A + V ++ P + ++ N G + +A G+ Sbjct: 53 DLLDMQALRRVFGEYCFDAVMHFSAKSLVGESVVHPALYYTNNVTGTCNLLEAMRESGVG 112 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + S+ G + P I E P P+N YG+SKL E +A + Y Sbjct: 113 RLVFSSTAAVYGDPQAPVIAEDHPCLPVNPYGRSKLMVETMLADHAAAY 161 >gi|15895601|ref|NP_348950.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|15025343|gb|AAK80290.1|AE007734_4 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|325509749|gb|ADZ21385.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018] Length = 301 Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR 109 P+V+I+ AA +V + +P +N G+ I + + IY ++ +F Sbjct: 66 PEVVIHNAAQISVADSVKDPLYDAKVNVLGSINILEMCRKYAVRKVIYPASAAIFGEPKY 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 PIDE P N ++ YG SK E + Y NY +LR + VY Sbjct: 126 LPIDEKHPLNMISSYGVSKHTVEHYLNVYKKLYNINYTVLRYSNVY 171 >gi|327184177|gb|AEA32624.1| dtdp-glucose 4,6-dehydratase [Lactobacillus amylovorus GRL 1118] Length = 345 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ + PEI N G + A GI + +STD Sbjct: 68 KLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGIKRFHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F PL+ Sbjct: 128 VYGDL---PLDRPDLFFHEDTPLH 148 >gi|323698196|ref|ZP_08110108.1| NAD-dependent epimerase/dehydratase [Desulfovibrio sp. ND132] gi|323458128|gb|EGB13993.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans ND132] Length = 336 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA A+ + P+ N +G I +AA +G+ C+ ST V+ Sbjct: 79 DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNIVQAARDLGVERCVVTSTSEVYGTARFV 138 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E P + Y +K+ ++ S+ N + Sbjct: 139 PITEDHPLQGQSPYSATKIGADQIAMSFYNAF 170 >gi|295675695|ref|YP_003604219.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002] gi|295435538|gb|ADG14708.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002] Length = 308 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 5/118 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ P+D + PD I++ AA + V ++P + +N G + +A + Sbjct: 56 RVKLDITSPEDCRRALDAVRPDYIVHLAAISFV--GHNDPLDFYRVNVIGTQNLLEACAA 113 Query: 91 IG-IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 IG +P + S+ V+ +S IDE P+N Y SK A E V ++ + IL Sbjct: 114 IGHVPRKLLIASSANVYGNVSSAAIDESFALTPVNHYAASKAAMEALVRTWFDRLPIL 171 >gi|227872030|ref|ZP_03990411.1| dTDP-glucose 4,6-dehydratase [Oribacterium sinus F0268] gi|227842122|gb|EEJ52371.1| dTDP-glucose 4,6-dehydratase [Oribacterium sinus F0268] Length = 338 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV+IN AA + VD++ +PEI N G + A GI + +STD Sbjct: 68 DLFAKEKPDVVINFAAESHVDRSLKDPEIFLKTNVLGTVCLMDACREYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF 115 V+ L D F Sbjct: 128 VYGDLPLERTDLF 140 >gi|229916935|ref|YP_002885581.1| UDP-glucose 4-epimerase [Exiguobacterium sp. AT1b] gi|229468364|gb|ACQ70136.1| UDP-glucose 4-epimerase [Exiguobacterium sp. AT1b] Length = 338 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F + S +++ A AV ++ +P + N G + + D GI Sbjct: 59 DIRDQELLDEIFSTHSIHAVVHFAGLKAVGESVSQPLHYYDNNVAGTLVLLRMMDQYGIK 118 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV 135 I S+ G+ T P+DE P + N YG++KL EE + Sbjct: 119 RIVFSSSATVYGIPTTSPVDESFPLSATNPYGRTKLMIEEML 160 >gi|219849037|ref|YP_002463470.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543296|gb|ACL25034.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 337 Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYI 98 +++ +L D++ N A T+ + P IN +I +A I +Y Sbjct: 70 EYSMNYLVQGHDILFNLAGQTSHLDSMRNPYTDLDINCRAQLSILEACRKHNPRITVVYA 129 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ST ++ P+DE +P+++ G +K+AGE Y N Y I Sbjct: 130 STRQIYGKPDYLPVDERHLLHPVDVNGINKMAGEWYHILYNNVYGI 175 >gi|301162550|emb|CBW22097.1| putative DNTP-hexose dehydratase-epimerase [Bacteroides fragilis 638R] Length = 298 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 8/144 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLK---PKDFASFFLSFSPDVIINP 57 M L G +G + ++ + II VG D D +F +F DV+ + Sbjct: 1 MTLLFTGASGFLGSNIIQLLNGAYNIISVGLSPQDTYLVDIATDIPTFTDAF--DVVFHA 58 Query: 58 AAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRTPIDE 114 A +V K E E + F +N +G + A + GIP I+IST V+ S I E Sbjct: 59 AGKAHSVPKTEAEKRLFFDVNLQGTKNLCTALERSGIPKAFIFISTVAVYGCDSGENITE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY 138 P N Y SK+ E+ + + Sbjct: 119 EHPLNGTTPYALSKIKAEKYLEGW 142 >gi|255016471|ref|ZP_05288597.1| putative nucleotide-diphosphate sugar epimerase [Bacteroides sp. 2_1_7] Length = 275 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 60/210 (28%), Positives = 81/210 (38%), Gaps = 41/210 (19%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F PD + + AAY V ED PE + N +G IA A G + +STD Sbjct: 3 ELFEEHRPDYVFHAAAYKHVPMMEDNPEESVRNNVDGTRVIADLAVKYGTRKFVMVSTD- 61 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAWVYSIFGSNF 158 NP N+ G SK E V S + V RT +V + FG N Sbjct: 62 -------------KAVNPTNVMGCSKRICEIYVQSLDQAIKDGKVSGRTQFVTTRFG-NV 107 Query: 159 L---LSMLRLAKERREISVVCDQFGTPTSALQ--IARAIIQI--AHNLIENSDTSLRG-- 209 L S++ L KE+ + G P + I R + I A L+ + T G Sbjct: 108 LGSNGSVIPLFKEQ-------IKRGGPVTVTHKDIIRFFMLIPEACKLVLEAGTMGNGGE 160 Query: 210 --IFHMTADGGPVSWADFAEYIFWESAERG 237 +F M G PV D AE + S +G Sbjct: 161 IFVFDM---GKPVRTVDLAERMIRLSGVKG 187 >gi|150402266|ref|YP_001329560.1| GDP-mannose 4,6-dehydratase [Methanococcus maripaludis C7] gi|150033296|gb|ABR65409.1| GDP-mannose 4,6-dehydratase [Methanococcus maripaludis C7] Length = 350 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 15/159 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL S P+ I N AA + V + + PE+ +I+A G + +A +G+ Sbjct: 63 DLTDITSLTSIIGKIKPNEIYNLAAQSHVKVSFEIPEVTANIDALGTLRLLEAVRILGLE 122 Query: 94 ---PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 ST ++ + TP E +P P + YG +KL G + +Y Sbjct: 123 KSTKLYQASTSELYGKVLETPQSETTPFYPRSPYGVAKLYGYWIIKNYRE---------A 173 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIA 189 Y +F N +L ERR ++ V + S +++ Sbjct: 174 YDMFACNGIL--FNHESERRGLTFVTRKITVGLSKIKLG 210 >gi|116629952|ref|YP_815124.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|116630171|ref|YP_815343.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|282851447|ref|ZP_06260812.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 224-1] gi|300361074|ref|ZP_07057251.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|300361288|ref|ZP_07057465.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|311110238|ref|ZP_07711635.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|311110416|ref|ZP_07711813.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|116095534|gb|ABJ60686.1| UDP-glucose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|116095753|gb|ABJ60905.1| UDP-galactose 4-epimerase [Lactobacillus gasseri ATCC 33323] gi|282557415|gb|EFB63012.1| UDP-glucose 4-epimerase [Lactobacillus gasseri 224-1] gi|300353693|gb|EFJ69564.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|300353907|gb|EFJ69778.1| UDP-glucose 4-epimerase [Lactobacillus gasseri JV-V03] gi|311065392|gb|EFQ45732.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] gi|311065570|gb|EFQ45910.1| UDP-glucose 4-epimerase [Lactobacillus gasseri MV-22] Length = 330 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +++ AAY+ V ++ +P + N G ++ +A D + + S+ G+ +T Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLQAMDDAKVKYLVFSSSAATYGIPKTL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P +P+N YG++K+ E+ Sbjct: 128 PITEDTPLDPINPYGETKMMMEK 150 >gi|117924705|ref|YP_865322.1| dTDP-glucose 4,6-dehydratase [Magnetococcus sp. MC-1] gi|117608461|gb|ABK43916.1| dTDP-glucose 4,6-dehydratase [Magnetococcus sp. MC-1] Length = 354 Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 11/112 (9%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC------ 95 + F+ PD +++ AA + VD++ D P N G + ++A + + Sbjct: 66 MSQLFVQEQPDAVVHLAAESHVDRSIDGPLTFVQTNVMGTAVLLESARAYWVQTAPAKQQ 125 Query: 96 ----IYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L + E +P P + Y SK A + V ++ Y Sbjct: 126 TFRFLHVSTDEVYGALGEQGLFTEQTPYAPSSPYSASKAASDHLVRAWYTTY 177 >gi|307705583|ref|ZP_07642435.1| UDP-glucose 4-epimerase [Streptococcus mitis SK597] gi|307620860|gb|EFN99944.1| UDP-glucose 4-epimerase [Streptococcus mitis SK597] Length = 332 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKQLDVYDASALKAYLEENKIDTVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +GI I S+ G + P E + +P+N Y ++KL GE + N Sbjct: 106 LSEVGIQKIMFSSTASLYGNNCIDKPATEDTLLDPVNPYAETKLMGERMIYWMAN----- 160 Query: 146 RTAWVYSIF 154 R W Y IF Sbjct: 161 RFDWKYVIF 169 >gi|260576618|ref|ZP_05844606.1| UDP-glucose 4-epimerase [Rhodobacter sp. SW2] gi|259021222|gb|EEW24530.1| UDP-glucose 4-epimerase [Rhodobacter sp. SW2] Length = 342 Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 8/151 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAAY 60 C V+ G + + ++ E ++ G P + DLL + F + P +++ AA Sbjct: 19 CKVLAAAGFVPVAFDNLSTGWREAVQFG-PLVVGDLLDRAAVDAAFAKYRPVAVLHFAAL 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 + V + +P + N GA + +AA + G ++ ST + IDE +P + Sbjct: 78 SLVGDSMSDPGRYWRENVTGALNLIEAAVAAGCGNFVFSSTCATYGDPDGVLIDEDTPQH 137 Query: 120 PLNIYGKSKLAGEEKV----ASYTNNYVILR 146 P+N YG SK A E+ + S+ +VI R Sbjct: 138 PINAYGASKRAIEDILRNFGVSHGLQHVIFR 168 >gi|315659664|ref|ZP_07912525.1| capsular polysaccharide biosynthesis protein Cap5N [Staphylococcus lugdunensis M23590] gi|315495397|gb|EFU83731.1| capsular polysaccharide biosynthesis protein Cap5N [Staphylococcus lugdunensis M23590] Length = 289 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF--DGLS 108 DVII+ AA + + E F IN +A A G+ I++ST VF DG+ Sbjct: 48 DVIIHTAALVHNNDPSAQLEDYFRINMHLPNKLANKAKKDGVNQFIFMSTMAVFGEDGVI 107 Query: 109 RTPIDEFSPTN--PLNIYGKSKLAGEEK---VASYTNNYVILRTAWVY 151 I+ P P+ YGKSK EEK ++S + VI+R +Y Sbjct: 108 GKNIEITDPMKIKPITDYGKSKAKAEEKLLNISSSSFKVVIIRPPMIY 155 >gi|313500048|gb|ADR61414.1| DTDP-glucose 4,6-dehydratase [Pseudomonas putida BIRD-1] Length = 356 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 22/144 (15%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 Q+LSS+ I G D+ + A + P IIN AA + VD++ P+ Sbjct: 41 QTLSSLQGDKRHIFVHG----DIADSRLVAELLNAHQPRAIINFAAESHVDRSIHGPQAF 96 Query: 74 FSINAEGAGAIAKAA----DSIGIPC------IYISTDYVFDGLSR-----TPIDEFSPT 118 N G + +AA S+ P +++STD V+ L+ T ++ P Sbjct: 97 IETNVVGTFQLLEAARAYWGSLNEPARQAFRFLHVSTDEVYGSLTADEPAFTETHQYQPN 156 Query: 119 NPLNIYGKSKLAGEEKVASYTNNY 142 +P Y SK A + V SY + Y Sbjct: 157 SP---YSASKAASDHLVRSYYHTY 177 >gi|254500100|ref|ZP_05112252.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] gi|222441398|gb|EEE48076.1| NAD dependent epimerase/dehydratase family [Labrenzia alexandrii DFL-11] Length = 337 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGL 107 F PDVI++ AA V + + P N G + +AA + + + + ST V+ Sbjct: 79 FKPDVIVHLAAQAGVRYSLENPRAYVDANVVGTLNVMEAARAANVQHLLMASTSSVYGAN 138 Query: 108 SRTPIDEFSPTN-PLNIYGKSKLAGE 132 + P DE T+ PL IY +K A E Sbjct: 139 TEMPFDENQKTDTPLTIYAATKKANE 164 >gi|218288132|ref|ZP_03492431.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218241491|gb|EED08664.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFD--GLS 108 DVI+N AA + VD++ +P N G + AA G+ I +STD V+ G Sbjct: 75 DVIVNFAAESHVDRSILDPGAFVRTNVMGTQVLLDAARRHGVKKFIQVSTDEVYGTLGPD 134 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E +P P + Y SK + V +Y Y Sbjct: 135 DAPFTETTPLRPNSPYSASKAGADLLVRAYHETY 168 >gi|145234745|ref|XP_001390021.1| UDP-glucose-4-epimerase [Aspergillus niger CBS 513.88] gi|134057694|emb|CAK38092.1| unnamed protein product [Aspergillus niger] Length = 303 Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ A Y D F N + +AA IG+P I ++ G++ Sbjct: 80 PDAVIHLAGYARNMIVPDNE--TFRGNVLSTYNVLEAACRIGVPKIITASSLCAYGVAFA 137 Query: 111 ---------PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P+DE TNP+++YG SK+ GE S+ + Sbjct: 138 EGDVDYPSFPVDEEVDTNPMDVYGLSKVVGERTARSFARRF 178 >gi|257469346|ref|ZP_05633440.1| NAD-dependent epimerase/dehydratase [Fusobacterium ulcerans ATCC 49185] gi|317063593|ref|ZP_07928078.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Fusobacterium ulcerans ATCC 49185] gi|313689269|gb|EFS26104.1| GDP-6-deoxy-D-lyxo-4-hexulose reductase [Fusobacterium ulcerans ATCC 49185] Length = 317 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 10/113 (8%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 +D+EI ++D+L ++ F PD I N AA ++V + P + IN +GA Sbjct: 42 EDIEIY-----NLDILNKEEIIKIFEKIKPDYIFNLAAQSSVSLSWKNPLLTIDINIKGA 96 Query: 82 GAIAKAADSIG-----IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 I A I I S +Y + + P+ E + P NIY +K+ Sbjct: 97 INILDAVREIDKYDPRTMLIGSSEEYGYVKENEIPVKEENNLRPGNIYAVTKV 149 >gi|296815452|ref|XP_002848063.1| UDP-glucose 4-epimerase [Arthroderma otae CBS 113480] gi|238841088|gb|EEQ30750.1| UDP-glucose 4-epimerase [Arthroderma otae CBS 113480] Length = 372 Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I RP+ L +D A+F F PD+ +I+ AA AV ++ + P Sbjct: 40 SEEALNRIELICGKRPEFVNLDVRDEAAFDKVFDAHPDIDSVIHFAALKAVGESTERPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ + ++ + ++ S+ V+ +R PI E P P N YG + Sbjct: 100 YYDVNVHGSICLLRSMVRHNVYNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTN 140 K+A E + N Sbjct: 160 KVAIESAITDMIN 172 >gi|315637921|ref|ZP_07893107.1| dTDP-glucose 4,6-dehydratase [Campylobacter upsaliensis JV21] gi|315481956|gb|EFU72574.1| dTDP-glucose 4,6-dehydratase [Campylobacter upsaliensis JV21] Length = 323 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 31 RPDIDLLKPKDFASFF---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R D++++ SFF L D +++ A A+ + P+ N +G + +A Sbjct: 49 REDLEIVSGDLRDSFFCDSLVKGVDAVLHLGALIAIPYSYTAPQSYVDTNIQGTLNLLEA 108 Query: 88 ADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + G+ I+ ST V+ TPIDE P P + Y SK+ + SY Sbjct: 109 SKRHGVKRFIHTSTSEVYGSAIYTPIDEKHPLQPQSPYSASKIGADMLALSY 160 >gi|168179790|ref|ZP_02614454.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] gi|182669326|gb|EDT81302.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum NCTC 2916] Length = 307 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAY 60 K + +G+N I +LS+ + +V + + I D+L P + + F D++ + AA Sbjct: 19 KLINLGHNVCIIDNLSTGNINNVN--KKAQLYINDILDP-NVSKIFEKEKFDIVYHLAAQ 75 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN 119 V K+ P +N G I + + +Y S+ V+ PIDE Sbjct: 76 IDVQKSITNPIFDSDVNVCGTINIINNCVNYNVKKIVYSSSAAVYGHPGYLPIDEKHVIM 135 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 P++ YG SK EE + ++N ++ ILR A VY I Sbjct: 136 PISYYGLSKYTAEEYIRLFSNLNNLDFTILRYANVYGI 173 >gi|167038028|ref|YP_001665606.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116441|ref|YP_004186600.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856862|gb|ABY95270.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929532|gb|ADV80217.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 349 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 10/113 (8%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DSI- 91 K+ S D ++N AA + VD++ +PEI N G + AA DS Sbjct: 63 KELVEEIFSQDIDYVVNFAAESHVDRSIIDPEIFVKTNVLGTVTLLNAAKKAWDEGDSFK 122 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + +STD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 123 EGKKFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTY 175 >gi|57505565|ref|ZP_00371492.1| UDP-glucose 4-epimerase, putative [Campylobacter upsaliensis RM3195] gi|57016112|gb|EAL52899.1| UDP-glucose 4-epimerase, putative [Campylobacter upsaliensis RM3195] Length = 323 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 31 RPDIDLLKPKDFASFF---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R D++++ SFF L D +++ A A+ + P+ N +G + +A Sbjct: 49 REDLEIVSGDLRDSFFCDSLVKGVDAVLHLGALIAIPYSYTAPQSYVDTNIQGTLNLLEA 108 Query: 88 ADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + G+ I+ ST V+ TPIDE P P + Y SK+ + SY Sbjct: 109 SKRHGVKRFIHTSTSEVYGSAIYTPIDEKHPLQPQSPYSASKIGADMLALSY 160 >gi|325959041|ref|YP_004290507.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] gi|325330473|gb|ADZ09535.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] Length = 312 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 2/154 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 V N I + S+ +++++ + + R D + D + D + + AA T+V Sbjct: 23 FVDNNEVVIVDNQSTGTIENIKELDISRIDTNFGSINDLNLEEIFEGTDYVFHLAAVTSV 82 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLN 122 ++ ++P + +N G + +AA + ++ S+ V+ PI E P NPL+ Sbjct: 83 PQSVEDPVKSNEVNITGTLKVLEAARKTDVKKLVFSSSSAVYGETEVLPISEEVPINPLS 142 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 Y SK E Y+ Y + T Y ++FG Sbjct: 143 PYAVSKATAELYCNVYSEIYDLPTTCLRYFNVFG 176 >gi|215489117|ref|YP_002331548.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O127:H6 str. E2348/69] gi|312969483|ref|ZP_07783685.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 2362-75] gi|215267189|emb|CAS11637.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O127:H6 str. E2348/69] gi|312286030|gb|EFR13948.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 2362-75] Length = 355 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNVLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|238916053|ref|YP_002929570.1| dTDP-glucose 4,6-dehydratase [Eubacterium eligens ATCC 27750] gi|238871413|gb|ACR71123.1| dTDP-glucose 4,6-dehydratase [Eubacterium eligens ATCC 27750] Length = 339 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ N G + A GI + +STD Sbjct: 68 KLFEEEHPDMVVNFAAESHVDRSIENPEVFLITNILGTQVLMDACRKYGIQRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|27377493|ref|NP_769022.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] gi|27350637|dbj|BAC47647.1| UDP-glucuronic acid epimerase [Bradyrhizobium japonicum USDA 110] Length = 339 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +IDL F SPD +++ AA V + D+P + N +G + +A G Sbjct: 63 EIDLADFAAVTRVFDEVSPDRVVHLAAQPGVRASIDDPITSIRANCDGFVTVLEAGRRHG 122 Query: 93 IP-CIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LR 146 + +Y S+ V+ P E S +P+++Y SK A E +Y + + + LR Sbjct: 123 VAHLVYASSSSVYGANRTLPYSTEHSVNHPVSLYAASKKANELMAHTYAHVHKLPVTGLR 182 Query: 147 TAWVYSIFG 155 VY +G Sbjct: 183 FFTVYGPWG 191 >gi|220932900|ref|YP_002509808.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] gi|219994210|gb|ACL70813.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] Length = 328 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSIN-AEGAGAIAKAADSIGI 93 DL + S + D +I+ AA++ V ++ + P + N + G + D+ Sbjct: 50 DLKDRELLDSIMKDYEIDGVIHLAAHSLVGESMENPGKYYKNNVSNGLNLLEAMVDNDVK 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 ++ ST V+ PI E PT P N YG+SKL E+ + Y YV LR Sbjct: 110 YLVFSSTAAVYGEPREVPITEDHPTAPTNTYGESKLFFEKMMKRYDEIYGLKYVSLR 166 >gi|329115659|ref|ZP_08244381.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001] gi|326695087|gb|EGE46806.1| NAD-Dependent Epimerase/Dehydratase [Acetobacter pomorum DM001] Length = 317 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 16/100 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+IN A + K + ++N EGAG +A+ A +P VF +S Sbjct: 74 DVVINLVAVLSSVKQQTLQ----AVNVEGAGRVARIAAETDVP--------VFVQMSALG 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 E L+ YG+S+ AGE+ V Y + VI+R + ++ Sbjct: 122 ASE----TALSAYGRSRAAGEKVVRQYRPDAVIIRPSVIF 157 >gi|319936150|ref|ZP_08010570.1| hypothetical protein HMPREF9488_01401 [Coprobacillus sp. 29_1] gi|319808724|gb|EFW05257.1| hypothetical protein HMPREF9488_01401 [Coprobacillus sp. 29_1] Length = 309 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 L K+ + F SPD+++ + A PE + E I K Sbjct: 24 LFNSKNISEAF-GLSPDLLVYSGVRAEMFLANSNPEADMDVIKEAIDDIKKINPK---KL 79 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-F 154 + IST V+D +S D F + L+ YG+++L EE V ++Y+I+R +Y + Sbjct: 80 VLISTVAVYDDISNGDEDTFINKDNLSAYGRNRLFLEEWVEGNYDDYLIVRLPAIYGLNL 139 Query: 155 GSNFL 159 NF+ Sbjct: 140 KKNFI 144 >gi|296115146|ref|ZP_06833787.1| polysaccharide biosynthesis protein CapD [Gluconacetobacter hansenii ATCC 23769] gi|295978247|gb|EFG84984.1| polysaccharide biosynthesis protein CapD [Gluconacetobacter hansenii ATCC 23769] Length = 650 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 15/99 (15%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P+ F + P+++ + AA V ED P N EG+ +A AA G Sbjct: 343 DVRDPRRIEQVFAQYRPELVFHAAALKHVPMVEDNPCEGLLTNIEGSRVVADAARRHGAR 402 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + ISTD NP +I G SK E Sbjct: 403 AMVQISTD--------------KAVNPSSIMGASKRVAE 427 >gi|294339370|emb|CAZ87726.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Thiomonas sp. 3As] Length = 340 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 10/141 (7%) Query: 3 CLVIGNNGQIAQSLSSMC------VQDVEIIRVGRP---DIDLLKPKDFASFFLSFSPDV 53 C+ + G I ++C + VE I RP D+ + F D Sbjct: 20 CVALIEAGYIPVVYDNLCNSSAESLARVERITGKRPAFVQADIRDAARLDAVFAQHKIDA 79 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + +A + I+ S+ V+ + TPI Sbjct: 80 VIHFAGLKAVGESVEKPLMYYDNNVGGTVVLLEAMQRAKVHNLIFSSSATVYGDPASTPI 139 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL EE Sbjct: 140 REDFPLSATNAYGRSKLMIEE 160 >gi|294155529|ref|YP_003559913.1| UDP-glucose 4-epimerase [Mycoplasma crocodyli MP145] gi|291600096|gb|ADE19592.1| UDP-glucose 4-epimerase [Mycoplasma crocodyli MP145] Length = 321 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ D + F D I++ AA V ++ +P F N EG + + I Sbjct: 51 DITNKNDLDNLFKKHKFDCIMDFAAKIVVPESVSKPLEYFYNNTEGVRLLIEQMKLHKIK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST V+ + +E + P+N YG+SKL+ E+ + SY NY ILR Sbjct: 111 NFVFSSTAAVYGKIDGGICNEDTILKPINPYGESKLSAEKIIQWCSHSYDFNYAILR 167 >gi|254489386|ref|ZP_05102589.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. GAI101] gi|214041893|gb|EEB82533.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. GAI101] Length = 345 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 9/106 (8%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGIP----CIY 97 F PD +++ AA + VD++ D P N G + +AA G P + Sbjct: 68 FADHQPDAVMHLAAESHVDRSIDGPGAFIQTNITGTYTLLEAARAYWQGAGKPDRFRFHH 127 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD VF L T E +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVFGSLGPTGQFTEDTPYDPRSPYSASKAASDHLVRAWGETY 173 >gi|147678913|ref|YP_001213128.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] gi|146275010|dbj|BAF60759.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] Length = 338 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K+ L+ DVI+N AA + VD++ +P I N G + A GI + I Sbjct: 65 KELVGKILAGGIDVIVNFAAESHVDRSIHDPGIFVKTNVLGTQVLLDGALKFGIKKFVQI 124 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 STD V+ L + E P P + Y SK A + V +Y + + Sbjct: 125 STDEVYGSLGASGYFREDMPLCPNSPYSASKAAADLLVHAYRHTF 169 >gi|238063688|ref|ZP_04608397.1| apramycin biosynthetic oxidoreductase 2 [Micromonospora sp. ATCC 39149] gi|237885499|gb|EEP74327.1| apramycin biosynthetic oxidoreductase 2 [Micromonospora sp. ATCC 39149] Length = 327 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 23/131 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA VD AE P + N G+ + AA G+ I +STD Sbjct: 79 DHVVHAAALKQVDTAEYNPSEFIATNITGSQHVVDAAIEAGVKKVIALSTD--------- 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE-------KVASYTNNYVILRTAWVYSIFGSNFLLSML 163 ++P+N+YG +KL G++ A + + ++R V GS L Sbjct: 130 -----KASSPINLYGATKLVGDKLFVSANHYAAHHPTRFAVVRYGNVVGSRGSVVPL-FR 183 Query: 164 RLAKERREISV 174 RLA E R + + Sbjct: 184 RLAAEGRSLPI 194 >gi|42518974|ref|NP_964904.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii NCC 533] gi|41583261|gb|AAS08870.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii NCC 533] Length = 345 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDIRDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|189501414|ref|YP_001960884.1| UDP-glucose 4-epimerase [Chlorobium phaeobacteroides BS1] gi|189496855|gb|ACE05403.1| UDP-glucose 4-epimerase [Chlorobium phaeobacteroides BS1] Length = 329 Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 17/148 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ AA A ++ PE N G I +A + G+P I+ S+ +F Sbjct: 70 DGIVHLAALKAAGQSMVVPEAYTEANIGGTINILNSALAAGVPNMIFSSSAAIFGSPRYL 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR--TAWVYSIFGSNFLLSM-- 162 PIDE P P N YG +KL E + Y Y +R A Y + G L M Sbjct: 130 PIDEDHPKEPENFYGFTKLEIERLMEWYDRLKGLKYASIRYFNAAGYDVQGRVDGLEMKP 189 Query: 163 ---LRLAKE-----RREISVVCDQFGTP 182 L + E R+ +SV D + TP Sbjct: 190 ENLLPIVMETAVGLRKGMSVFGDDYQTP 217 >gi|260429604|ref|ZP_05783581.1| NAD-dependent epimerase/dehydratase [Citreicella sp. SE45] gi|260420227|gb|EEX13480.1| NAD-dependent epimerase/dehydratase [Citreicella sp. SE45] Length = 780 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 32/179 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGR----------------PDIDLLK 38 MK LV GN G I L+ M V ++ R DI ++ Sbjct: 16 MKVLVTGNRGYIGVILTPMLQAAGHEVTGIDSDLYSRCTFAPGGEMPEVPTLLKDIRDVE 75 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 P DF D +++ AA + + PE+ IN +G +A AA + G+ Sbjct: 76 PSDFEGV------DAVLHLAALSNDPLGDFRPEVTEDINFQGTMRVASAAKAAGVSRFVF 129 Query: 99 STDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 S+ G IDE NP+ YG SK+ E +A ++ LR+A Y + Sbjct: 130 SSSCSNYGAGGADFIDETGAFNPVTPYGVSKVKSELALAELADDNFCPTFLRSATAYGV 188 >gi|239813785|ref|YP_002942695.1| UDP-glucose 4-epimerase [Variovorax paradoxus S110] gi|239800362|gb|ACS17429.1| UDP-glucose 4-epimerase [Variovorax paradoxus S110] Length = 345 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +I+ A AV + +P + N G+ +A A G+ I+ S+ V+ +PI Sbjct: 80 VIHFAGLKAVGDSVADPLTYYDNNVHGSLVLASAMQQAGVRTLIFSSSATVYGEPDHSPI 139 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA 136 E +P P N YG+SK EE +A Sbjct: 140 PEDAPCRPANPYGRSKHMVEEALA 163 >gi|171185385|ref|YP_001794304.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934597|gb|ACB39858.1| NAD-dependent epimerase/dehydratase [Thermoproteus neutrophilus V24Sta] Length = 300 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 28/178 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK---------------DFASF 45 M+ L+ G G I +L+ + + E+ RP KP+ D A+ Sbjct: 1 MRILLFGGLGFIGANLAE-ALSEHELYVAHRPGSPQAKPRLARFVARYATLLEYRDPATA 59 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYISTDYV 103 SP V+IN V + P+ + NAE + AA G ++ S V Sbjct: 60 LERASPHVVIN-----LVGEYFGGPQELWRANAEFPRLLCDAARRAGWRGKVVHFSAATV 114 Query: 104 FDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 G I+E P P N + +SK AGEE VA +++VI+R VY F ++ Sbjct: 115 -RGPVGAVIEEEEPHLHGVAPDNDFDRSKAAGEEAVARCFDDWVIIRPVLVYGRFNTH 171 >gi|163847677|ref|YP_001635721.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525536|ref|YP_002570007.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668966|gb|ABY35332.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222449415|gb|ACM53681.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 346 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKS 127 P++A+ N EG + AA++ + ++ Y GLS P+ E SP NP ++Y ++ Sbjct: 105 PQVAWRYNFEGTKRVFAAAEAGRVGRFVFASTYSNYGLSPDGKPVTEESPLNPQSLYAET 164 Query: 128 KLAGE----EKVASYTNNYVILRTAWVYSI 153 K+A E E A ++ R A ++ + Sbjct: 165 KIAAEQFLRENTAGAATMPILFRFATLFGV 194 >gi|110644114|ref|YP_671844.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 536] gi|191174427|ref|ZP_03035929.1| dTDP-glucose 4,6-dehydratase [Escherichia coli F11] gi|300979317|ref|ZP_07174501.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 200-1] gi|110345706|gb|ABG71943.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 536] gi|190905282|gb|EDV64919.1| dTDP-glucose 4,6-dehydratase [Escherichia coli F11] gi|300308070|gb|EFJ62590.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 200-1] gi|324014734|gb|EGB83953.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 60-1] Length = 355 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEYQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNVLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|261350620|ref|ZP_05976037.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii DSM 2374] gi|288861403|gb|EFC93701.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii DSM 2374] Length = 322 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 KD F + D +++ A+++V ++ + P+ F N + + + G+ I Sbjct: 53 KDLREVFEKYDIDGVLHFGAFSSVAESVELPQKYFKNNYKNTINLLQIMREFGVNKFILS 112 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 ST V+ + PI E P+N YG SK A E + A NYV LR Sbjct: 113 STAAVYGNPEKVPITEDQELKPINPYGHSKFITEKALEREAAKGDFNYVALR 164 >gi|222444807|ref|ZP_03607322.1| hypothetical protein METSMIALI_00420 [Methanobrevibacter smithii DSM 2375] gi|222434372|gb|EEE41537.1| hypothetical protein METSMIALI_00420 [Methanobrevibacter smithii DSM 2375] Length = 322 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 KD F + D +++ A+++V ++ + P+ F N + + + G+ I Sbjct: 53 KDLREVFEKYDIDGVLHFGAFSSVAESVELPQKYFKNNYKNTINLLQIMREFGVNKFILS 112 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 ST V+ + PI E P+N YG SK A E + A NYV LR Sbjct: 113 STAAVYGNPEKVPITEDQELKPINPYGHSKFITEKALEREAAKGDFNYVALR 164 >gi|254480966|ref|ZP_05094212.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2148] gi|214038761|gb|EEB79422.1| UDP-glucose 4-epimerase [marine gamma proteobacterium HTCC2148] Length = 339 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 10/146 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RV----GRP----DIDLLKPKDFASFFLSFSPDV 53 C+ + G L ++C E + RV G P D+ F S Sbjct: 19 CVCLAEAGYSVVVLDNLCNASAEAVARVEELTGMPVPLVQCDIRDAVGLDQLFASHDIAA 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +++ A AV ++ ++P + N G + A + G+ I+ S+ V+ + PI Sbjct: 79 VMHFAGLKAVGESVEKPLEYYDNNVNGTLVLLAAMERAGVDKFIFSSSATVYGDPASVPI 138 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASY 138 E PT+ N YG+SKL EE +A + Sbjct: 139 KESFPTSATNPYGRSKLMVEEILADW 164 >gi|148643762|ref|YP_001274275.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii ATCC 35061] gi|148552779|gb|ABQ87907.1| UDP-glucose 4-epimerase [Methanobrevibacter smithii ATCC 35061] Length = 322 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 KD F + D +++ A+++V ++ + P+ F N + + + G+ I Sbjct: 53 KDLREVFEKYDIDGVLHFGAFSSVAESVELPQKYFKNNYKNTINLLQIMREFGVNKFILS 112 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 ST V+ + PI E P+N YG SK A E + A NYV LR Sbjct: 113 STAAVYGNPEKVPITEDQELKPINPYGHSKFITEKALEREAAKGDFNYVALR 164 >gi|27381042|ref|NP_772571.1| UDP-galactose 4-epimerase [Bradyrhizobium japonicum USDA 110] gi|27354208|dbj|BAC51196.1| UDP-galactose 4-epimerase [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ + P+ E +PT PL+ YG SKL E + A+Y YV LR Sbjct: 116 IFSSTAAVYGDPDQVPVPEHAPTRPLSPYGSSKLMTEIMLHDVAAAYGMQYVTLR 170 >gi|266620449|ref|ZP_06113384.1| NAD dependent epimerase/dehydratase family protein [Clostridium hathewayi DSM 13479] gi|288867953|gb|EFD00252.1| NAD dependent epimerase/dehydratase family protein [Clostridium hathewayi DSM 13479] Length = 233 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 D P + N G +AA + GI +Y+S+ V+ +S + E P + N YG Sbjct: 13 DNPYKIYRTNVLGTMTSLEAARNYGIERYLYMSSGAVYGNVSMDVVTEEVPMHSENPYGA 72 Query: 127 SKLAGEEKVASYTNNYVILRTAWVYS 152 +K+A EE V +Y + LR +VY Sbjct: 73 TKVACEELVRNYGLDSASLRIGFVYG 98 >gi|261251158|ref|ZP_05943732.1| UDP-glucose 4-epimerase [Vibrio orientalis CIP 102891] gi|260938031|gb|EEX94019.1| UDP-glucose 4-epimerase [Vibrio orientalis CIP 102891] Length = 338 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 D +I+ A AV ++ ++P + N G + A +G+ ++ S+ V+ + Sbjct: 75 DAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMREVGVKSLVFSSSATVYGDPASV 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 PI E PT+ N YG+SKL EE + + Sbjct: 135 PITEDFPTSATNPYGRSKLMVEECLTDF 162 >gi|229492398|ref|ZP_04386205.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis SK121] gi|229320807|gb|EEN86621.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis SK121] Length = 343 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 14/129 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N AA + V + DEPE G+ + +A G+ Sbjct: 63 DLSDGARLVTLLAQIRPDEVYNLAAQSHVRVSFDEPEHTGDTTGIGSIRLLEAVRMAGLE 122 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVY 151 C Y ++ G + P DE +P P + YG + KV SY T NY R A Y Sbjct: 123 CRFYQASSSEMFGATPPPQDEQTPFYPRSPYGAA------KVYSYWITKNY---REA--Y 171 Query: 152 SIFGSNFLL 160 IF N +L Sbjct: 172 GIFAVNGIL 180 >gi|254393379|ref|ZP_05008524.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294817657|ref|ZP_06776299.1| Staurosporine biosynthesis dTDP-glucose 4,6-dehydratase StaB [Streptomyces clavuligerus ATCC 27064] gi|326446639|ref|ZP_08221373.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|197707011|gb|EDY52823.1| dTDP-glucose 4,6-dehydratase [Streptomyces clavuligerus ATCC 27064] gi|294322472|gb|EFG04607.1| Staurosporine biosynthesis dTDP-glucose 4,6-dehydratase StaB [Streptomyces clavuligerus ATCC 27064] Length = 324 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D+++N AA + VD++ N G + +A GIP + +STD V+ + Sbjct: 69 DLVVNFAAESHVDRSIAGAGEFVRTNVLGVQTLLQACLDAGIPRVVQVSTDEVYGSIDTG 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE +P +P + Y SK AG+ +Y + Sbjct: 129 SWDETAPLSPNSPYAASKAAGDLIALAYARTH 160 >gi|171910199|ref|ZP_02925669.1| NAD-dependent epimerase/dehydratase [Verrucomicrobium spinosum DSM 4136] Length = 320 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQD R+ + DL P+ F D +I+ AA V + ++PE+ N +G Sbjct: 49 VQD----RITLVEGDLRDPEVVERAFAEGKYDAVIHLAARAGVRPSIEQPELYIDTNIKG 104 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASY 138 + +A G+ ++ S+ V+ + P E P ++ Y +K+AGE+ ++Y Sbjct: 105 TFYLLEACKRHGVKKFVFASSSSVYGVNKKVPFAEEDPILQTISPYAMTKMAGEQMCSNY 164 Query: 139 TNNY----VILRTAWVYS 152 + Y V LR VY Sbjct: 165 STLYGIRCVCLRFFTVYG 182 >gi|172039918|ref|YP_001799632.1| dTDP-glucose-4,6-dehydratase [Corynebacterium urealyticum DSM 7109] gi|171851222|emb|CAQ04198.1| dTDP-glucose-4,6-dehydratase [Corynebacterium urealyticum DSM 7109] Length = 367 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%) Query: 51 PDV----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV I++ AA + D + +P + N +G +A+AA GI ++STD VF Sbjct: 101 PDVDGLAIVHFAAESHNDNSLLDPALFVRSNVDGTVHLAEAAVRHGIYLHHVSTDEVFGD 160 Query: 107 LSRTPIDEFSPTNPL---NIYGKSKLAGEEKVASY 138 L F+PT P + Y SK A + V ++ Sbjct: 161 LELDDPQRFTPTTPYQPSSPYSASKAAADHMVRAF 195 >gi|255710523|ref|XP_002551545.1| KLTH0A01958p [Lachancea thermotolerans] gi|238932922|emb|CAR21103.1| KLTH0A01958p [Lachancea thermotolerans] Length = 688 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 18/143 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVII 55 +C+V+ N S+ C + + ++V +DL F F D +I Sbjct: 35 RCIVVDN-------FSNSCYEPIARLKVLLETEIPFFKVDLTDADGLEKVFRKFKIDSVI 87 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR----T 110 + A AV ++ P + N G + G ++ S+ V+ +R Sbjct: 88 HFAGLKAVGESTKIPLSYYYNNITGTLVLLDIMKKYGTEMLVFSSSATVYGDATRFPDMI 147 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E PT P N YGK+KLA EE Sbjct: 148 PIPEECPTGPTNPYGKTKLAIEE 170 >gi|116873841|ref|YP_850622.1| UDP-glucose 4-epimerase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742719|emb|CAK21843.1| UDP-glucose 4-epimerase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 327 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F S D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKESVDGVIHFAASSLVGESMEIPLDYLNNNVYGTQIVLEVMEQFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +S+ D + TP Sbjct: 175 KADGSIGEDHQPESHLVPIILQVALGQREKLSIFGDDYNTP 215 >gi|116753599|ref|YP_842717.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] gi|116665050|gb|ABK14077.1| NAD-dependent epimerase/dehydratase [Methanosaeta thermophila PT] Length = 319 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 4/102 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D++ + AA +V E + + NA + +A + I + ST V+ Sbjct: 76 DIVFHLAANPSVAVGETDTRVHLEQNALTTYNLLEAMRRARVRRIAFTSTSTVYGEAKII 135 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P +++ P P+++YG SKLA E ++SY + + + AW+Y Sbjct: 136 PTPEDYGPLKPISLYGASKLACEAMISSYCHTFDM--QAWIY 175 >gi|291560746|emb|CBL39546.1| Predicted nucleoside-diphosphate sugar epimerases [butyrate-producing bacterium SSC/2] Length = 625 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 22/119 (18%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PD++ + AA+ V ED P A N G IAK A G+ + ISTD Sbjct: 360 NIFEDYKPDIVFHAAAHKHVPLMEDSPHDAIKNNVFGTFNIAKEAGMSGVKRMVLISTD- 418 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSN 157 P NI G SK E + + Y YV +R ++ GSN Sbjct: 419 -------------KAVRPTNIMGASKRICEMVIQYMNSLYDTEYVAVRFG---NVLGSN 461 >gi|254496245|ref|ZP_05109139.1| NAD dependent epimerase/dehydratase, UDP-glucose-4-epimerase [Legionella drancourtii LLAP12] gi|254354550|gb|EET13191.1| NAD dependent epimerase/dehydratase, UDP-glucose-4-epimerase [Legionella drancourtii LLAP12] Length = 318 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 15/129 (11%) Query: 52 DVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADS------IGIPCIYISTDYV 103 DV+I+ AA V +KAE + IN+ +AK A I + I ++ ++ Sbjct: 63 DVVIHLAARVHVMKEKAEFVLDDYCKINSIATRNLAKQAAKHHVKRFIFLSSIKVNGEFT 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFL 159 G TP E S P + YG+SKL E+ + + N VI+R +Y Sbjct: 123 LKG---TPFTEESSAQPEDPYGQSKLYAEQYLRVISQNTGLEVVIIRPPLIYGPEVKANF 179 Query: 160 LSMLRLAKE 168 L MLRL K+ Sbjct: 180 LRMLRLVKK 188 >gi|163737928|ref|ZP_02145344.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis BS107] gi|161388544|gb|EDQ12897.1| UDP-glucose 4-epimerase [Phaeobacter gallaeciensis BS107] Length = 346 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + P +++ AA + V +A EP ++ N G+ + +AA + Sbjct: 70 DLSDRARLDEVFAKYQPAAVMHFAALSQVGEAMSEPGRYWANNVGGSLTLIEAA--VAAD 127 Query: 95 C---IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 C ++ ST + +DE +P PLN YG SK A E+ + AS+ VI R Sbjct: 128 CLDFVFSSTCATYGEHDNVVLDESTPQVPLNAYGASKRAVEDILRDFGASHGLRSVIFR 186 >gi|108798039|ref|YP_638236.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. MCS] gi|119867134|ref|YP_937086.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. KMS] gi|108768458|gb|ABG07180.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. MCS] gi|119693223|gb|ABL90296.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. KMS] Length = 335 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L + D +++ AA T VD A +P N G + +A G+ ++STD V+ Sbjct: 71 LDPATDAVVHFAAETHVDNALADPGPFVQTNVVGTYTVLEAVRRAGVRLHHVSTDEVYGD 130 Query: 107 LSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 L+ F +P NP + Y +K A + V ++ +Y + T Sbjct: 131 LALDDPQRFTESTPYNPSSPYSSTKAAADLLVRAWVRSYGVRAT 174 >gi|330466722|ref|YP_004404465.1| polysaccharide biosynthesis protein CapD [Verrucosispora maris AB-18-032] gi|328809693|gb|AEB43865.1| polysaccharide biosynthesis protein CapD [Verrucosispora maris AB-18-032] Length = 336 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 23/131 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +++ AA VD AE P + N G+ + AA G+ I +STD Sbjct: 79 DHVVHAAALKQVDTAEYNPSEFIATNITGSQHVVDAAIEAGVRKVIALSTDKA------- 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE-------KVASYTNNYVILRTAWVYSIFGSNFLLSML 163 ++P+N+YG +KL G++ A + + ++R V GS L Sbjct: 132 -------SSPINLYGATKLVGDKLFISANHYAAHHPTRFAVVRYGNVVGSRGSVVPL-FR 183 Query: 164 RLAKERREISV 174 RLA E R + + Sbjct: 184 RLAAEGRSLPI 194 >gi|289577886|ref|YP_003476513.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter italicus Ab9] gi|289527599|gb|ADD01951.1| dTDP-glucose 4,6-dehydratase [Thermoanaerobacter italicus Ab9] Length = 349 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 33/175 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGR----------------PDIDLLK--- 38 MK LV G G I + + +D +II + + P+ +K Sbjct: 1 MKILVTGGAGFIGSNFIKYMLSKYKDYKIINLDKLTYAGNLENLKDVEDNPNYTFIKGDI 60 Query: 39 -PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DS 90 K+ S D ++N AA + VD++ +PEI N G + AA DS Sbjct: 61 CDKELIEEIFSQDIDYVVNFAAESHVDRSIIDPEIFVKTNVLGTVTLLNAAKKAWEQGDS 120 Query: 91 I--GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + +STD V+ L T E +P +P + Y SK A + V +Y + Y Sbjct: 121 FKEGKKFLQVSTDEVYGSLGETGYFTETTPLDPHSPYSSSKAAADLIVKAYYDTY 175 >gi|305680991|ref|ZP_07403798.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266] gi|305659196|gb|EFM48696.1| UDP-glucose 4-epimerase [Corynebacterium matruchotii ATCC 14266] Length = 342 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 36/239 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRP-DIDLLKP--KDFASFFL 47 MK LV G G + +++ ++ D+ I+ R P + L++ +D A L Sbjct: 14 MKLLVTGGAGYVGSVCATVLLEQGHDITIVDNFSTGNRDAVPANATLIEGDIRDVAGDVL 73 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + D +++ AA + V ++ + PE + N + A + G+ ++ ST + Sbjct: 74 AGGNFDGVVHFAARSLVGESMERPEDYWHHNFVTTLTLLDAMRNHGVTNLVFSSTAATYG 133 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------AWVYSIFGSN- 157 R PI E PT P N YG SKLA + + SY + + + T A Y G N Sbjct: 134 EPDRVPITEDMPTAPTNPYGASKLAIDYAITSYAHAHGLGATSLRYFNVAGAYGSVGENR 193 Query: 158 -----FLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-----AHNLIENSDT 205 + +L++A R EI + D + PT R I I AH L S+T Sbjct: 194 EVETHLIPLVLQVALGHRDEIFIFGDDY--PTKDGTCIRDYIHIKDLADAHVLALESNT 250 >gi|167767605|ref|ZP_02439658.1| hypothetical protein CLOSS21_02138 [Clostridium sp. SS2/1] gi|167710622|gb|EDS21201.1| hypothetical protein CLOSS21_02138 [Clostridium sp. SS2/1] Length = 634 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 22/119 (18%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F + PD++ + AA+ V ED P A N G IAK A G+ + ISTD Sbjct: 369 NIFEDYKPDIVFHAAAHKHVPLMEDSPHDAIKNNVFGTFNIAKEAGMSGVKRMVLISTD- 427 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSN 157 P NI G SK E + + Y YV +R ++ GSN Sbjct: 428 -------------KAVRPTNIMGASKRICEMVIQYMNSLYDTEYVAVRFG---NVLGSN 470 >gi|152965793|ref|YP_001361577.1| GDP-mannose 4,6-dehydratase [Kineococcus radiotolerans SRS30216] gi|151360310|gb|ABS03313.1| GDP-mannose 4,6-dehydratase [Kineococcus radiotolerans SRS30216] Length = 330 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + + AA + V + DEPE G I +A IG+ Sbjct: 64 DLTDGSRMVTLLDDIRPDEVYHLAAQSHVRVSFDEPEFTGDTTGLGTTRILEAIRMIGLQ 123 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 C Y ++ G + P E +P +P + YG +K+ G +Y Y Sbjct: 124 CRFYQASSSEMFGATPPPQSETTPFHPRSPYGAAKVYGYWMTRNYREAY 172 >gi|163735897|ref|ZP_02143325.1| UDP-glucose 4-epimerase [Roseobacter litoralis Och 149] gi|161390833|gb|EDQ15174.1| UDP-glucose 4-epimerase [Roseobacter litoralis Och 149] Length = 350 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 A + S D +I+ A +V + + +P + F N G + A + G I+ S+ Sbjct: 80 IADILMRESCDAVIHFAGRKSVGEGQSDPVLYFDQNVGGTVQLLHAMNKSGCKKLIFSSS 139 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 V+ PIDE P + N+YG +K E+ + Sbjct: 140 AVVYGNPEYLPIDEEHPLSTCNVYGDTKRTVEDML 174 >gi|222479502|ref|YP_002565739.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222452404|gb|ACM56669.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 325 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD-YVFDGLSRT 110 D +I+ AA T D F++N +G + AA + + +++ + + T Sbjct: 80 DAVIHLAAITGAASTHDRKAETFAVNRDGTENVLTAAGKFDVENVVVASSCNNYGRAAST 139 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 IDE + NPLN Y +SK+A E Sbjct: 140 DIDEETEQNPLNPYAESKVACE 161 >gi|326315832|ref|YP_004233504.1| UDP-glucose 4-epimerase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372668|gb|ADX44937.1| UDP-glucose 4-epimerase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 338 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 10/144 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGR-----PDI---DLLKPKDFASFFLSFSPDV 53 C+ + G L + C ++ RVGR PD+ D+ A F D Sbjct: 16 CVALAGAGLPFLILDNFCNSRRSVLERVGRITGRVPDLVEGDVRDEGLLARIFAEHPIDA 75 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +I+ AA +V ++ EP + N G A+ +A + ++ S+ V+ + PI Sbjct: 76 VIHFAALKSVGESVREPLSYYDNNVAGTVALLRAMRKADVRTLVFSSSATVYGEPASLPI 135 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA 136 E P + N YG+SKL E+ +A Sbjct: 136 REDFPLSATNPYGQSKLMMEQVLA 159 >gi|281411855|ref|YP_003345934.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] gi|281372958|gb|ADA66520.1| NAD-dependent epimerase/dehydratase [Thermotoga naphthophila RKU-10] Length = 323 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 21/163 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-------------------VGRPDIDLLKPKD 41 MK LV G G I L+ ++ +R + + ++ +D Sbjct: 1 MKILVTGAGGFIGSHLTEFLIEKGHDVRAFVRYNSRNFWGWLEKSKVIDKIEVYTGDVRD 60 Query: 42 FASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 + S + + DV+ + AA + + P N EG I +AA + ++ S Sbjct: 61 YDSVYNAMKGVDVVFHLAALIGIPYSYISPLAYIKTNVEGTYNILQAARERKVSRVVHTS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 T ++ PIDE P NP + Y SK A + S+ ++ Sbjct: 121 TSEIYGTAQYVPIDEKHPYNPQSPYAASKAAADHLALSFYRSF 163 >gi|227878985|ref|ZP_03996885.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256849690|ref|ZP_05555121.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|262046739|ref|ZP_06019700.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] gi|227861423|gb|EEJ69042.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256713179|gb|EEU28169.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|260573188|gb|EEX29747.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] Length = 330 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ G+ + Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAATYGIPKKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG++K+ E+ +A Sbjct: 128 PITEDTPLDPINPYGETKMMMEKIMA 153 >gi|283795743|ref|ZP_06344896.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] gi|291076681|gb|EFE14045.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] Length = 357 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 18/153 (11%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------- 91 AS F + D +IN AA + VD++ PEI N G + + A Sbjct: 68 ASLFEKYDFDYVINFAAESHVDRSIANPEIFVQTNVMGTINLLQRAKEAWYNPETKAWKE 127 Query: 92 GIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR 146 G + +STD V+ L + E +P +P + Y SK + + V ++ + Y I R Sbjct: 128 GKKYLQVSTDEVYGALGTEGYFTETTPLSPHSPYSSSKASADHFVQAFHDTYGMPVNITR 187 Query: 147 TAWVYS--IFGSNFLLSMLRLAKERREISVVCD 177 + Y F + M+ K +++SV D Sbjct: 188 CSNNYGPYQFPEKLIPLMINNVKHHKQLSVYGD 220 >gi|90417245|ref|ZP_01225172.1| predicted nucleoside-diphosphate sugar epimerase [marine gamma proteobacterium HTCC2207] gi|90331021|gb|EAS46282.1| predicted nucleoside-diphosphate sugar epimerase [marine gamma proteobacterium HTCC2207] Length = 435 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 15/97 (15%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 A+ F + D++IN AAY V ED P AF+ N + ++A G+ I IST Sbjct: 184 LATIFQKYDVDLVINAAAYKHVSIMEDNPYAAFTNNVSNFLELLRSAKVFGVKDIIQIST 243 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 D +P +I G SK E+ +A+ Sbjct: 244 D--------------KAASPSSIMGFSKFLCEQLLAN 266 >gi|299137753|ref|ZP_07030934.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] gi|298600394|gb|EFI56551.1| NAD-dependent epimerase/dehydratase [Acidobacterium sp. MP5ACTX8] Length = 328 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA +V ++ ++P + + NA G ++ AA + G+ +Y ++ + Sbjct: 70 DFVLHEAALASVPRSINDPMSSHTANATGTLSVLMAAQTAGVSRVVYAASSSAYGDQEAH 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P E PL+ Y KLAGE V S+ Sbjct: 130 PKHESMCPAPLSPYAVQKLAGENYVKSF 157 >gi|284161894|ref|YP_003400517.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] gi|284011891|gb|ADB57844.1| NAD-dependent epimerase/dehydratase [Archaeoglobus profundus DSM 5631] Length = 306 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ P E PT P++IYG SK+A E +ASY + + + AW+Y Sbjct: 112 VFTSTSTVYGEAKVIPTPEDYPTIPISIYGASKVACEAMIASYCHTFDM--KAWIY 165 >gi|262037187|ref|ZP_06010674.1| UDP-glucose 4-epimerase [Leptotrichia goodfellowii F0264] gi|261748786|gb|EEY36138.1| UDP-glucose 4-epimerase [Leptotrichia goodfellowii F0264] Length = 346 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 1/146 (0%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 G N I +LS Q EI+ V DL K F D +++ AA+ V ++ Sbjct: 45 GYNPIIYDNLSKGYEQVAEILGVKLIKGDLGDKKKLKEVFGKEKIDAVMHFAAFIEVGES 104 Query: 67 EDEPEIAFSIN-AEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +P + N A+ + + +S I+ ST F + IDE P+N YG Sbjct: 105 VQKPSEYYDNNVAKVLKLLDQMVESGVKKFIFSSTAATFGEPKKEKIDETHIQFPINPYG 164 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVY 151 K+KL E+ + Y Y + T Y Sbjct: 165 KTKLTVEKILEDYDTAYGLKSTVLRY 190 >gi|296124398|ref|YP_003632176.1| polysaccharide biosynthesis protein CapD [Planctomyces limnophilus DSM 3776] gi|296016738|gb|ADG69977.1| polysaccharide biosynthesis protein CapD [Planctomyces limnophilus DSM 3776] Length = 628 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 15/100 (15%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ F ++ P ++ + AAY V E P+ A N G A+ AAD G+ Sbjct: 344 DMRDQPTLEQIFDTYKPQLVFHAAAYKHVPLMEANPQEAIRNNIFGTKALVDAADQFGVD 403 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + ISTD P NI G +KL E+ Sbjct: 404 RFVLISTD--------------KAVRPTNIMGSTKLFAEK 429 >gi|224437522|ref|ZP_03658480.1| NAD-dependent epimerase/dehydratase family protein [Helicobacter cinaedi CCUG 18818] gi|313143972|ref|ZP_07806165.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313129003|gb|EFR46620.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 334 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++ + AA A+ + P+ N +G I +AA G+ I+ ST V+ Sbjct: 81 DMVFHLAALIAIPYSYVAPDSYVDTNIKGTLNICQAALDSGVKRIIHTSTSEVYGTAQYV 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 PIDE P P + Y SK+ + S+ N + + L A ++ +G Sbjct: 141 PIDEKHPLQPQSPYSASKIGADAIAMSFHNAFCLPLTIARPFNTYG 186 >gi|89068446|ref|ZP_01155843.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] gi|89045865|gb|EAR51925.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] Length = 303 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 72/194 (37%), Gaps = 17/194 (8%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGR--PDIDLLKPKD---FASFFLSF 49 M+ LV G G I +L + V V+I GR P + LL D A + Sbjct: 1 MRVLVTGGAGLIGMALRRGLAAAGHEVVAVDITDFGRDDPGLVLLPLSDIEGLARLADAR 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 + I++ + D+P + N A+ A + +S+ V+ Sbjct: 61 RIEAIVHGGGVSGPMMMRDDPAGIVATNTVSTAALLDIARRREARFLLLSSHVVYGETGD 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIF--GSNFLLSML 163 IDE P P Y SK + VAS+ + + LR VY + + FL + Sbjct: 121 AVIDEDRPPRPTTTYAASKAGADALVASFRHEFAADAASLRLTRVYGAYRRANCFLRQAI 180 Query: 164 RLAKERREISVVCD 177 A RE + CD Sbjct: 181 LDAAAGRETVIKCD 194 >gi|311033167|ref|ZP_07711257.1| UDP-glucose 4-epimerase [Bacillus sp. m3-13] Length = 337 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +I+LL A F + + +I+ A AV ++ ++P + N G + + G Sbjct: 56 EINLLDKDRVARVFQEHNIEAVIHFAGLKAVGESVEKPLFYYHNNISGTLLLLEVMHQFG 115 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 + I S+ GL + PI E P + N YG++KL E+ Sbjct: 116 VKNIVFSSSATVYGLPESVPISESFPLSATNPYGQTKLMIEQ 157 >gi|307595653|ref|YP_003901970.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307550854|gb|ADN50919.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 331 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 3/104 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA + E P+ IN +AK A +G+ +++ G Sbjct: 68 DAVVDLAALSNDPAGELNPQWTLDINYRARARLAKLASEVGVSRYVLASSCSVYGRQSGI 127 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS 152 DE + NPL Y K+ L E+ V +N LR A VY Sbjct: 128 ADENTEPNPLTTYAKANLLAEKDVLPLASNRFTVTALRFATVYG 171 >gi|308235688|ref|ZP_07666425.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14018] gi|311114285|ref|YP_003985506.1| dTDP glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14019] gi|310945779|gb|ADP38483.1| dTDP glucose 4,6-dehydratase [Gardnerella vaginalis ATCC 14019] Length = 344 Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D + PE N EG + +A GI +ISTD V+ L+ Sbjct: 85 DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVRKYGIRYHHISTDEVYGDLALDD 144 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +F +P +P + Y +K A + V ++T Y + T Sbjct: 145 PAKFTEETPYHPSSPYSSTKAASDMLVRAWTRTYGLHTT 183 >gi|289549707|ref|YP_003470611.1| Capsular polysaccharide synthesis enzyme Cap8N [Staphylococcus lugdunensis HKU09-01] gi|289179239|gb|ADC86484.1| Capsular polysaccharide synthesis enzyme Cap8N [Staphylococcus lugdunensis HKU09-01] Length = 289 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF--DGLS 108 DVII+ AA + + E F IN +A A G+ I++ST VF DG+ Sbjct: 48 DVIIHTAALVHNNDPSAQLEDYFRINMHLPNKLANKAKKDGVNQFIFMSTMAVFGEDGVI 107 Query: 109 RTPIDEFSPTN--PLNIYGKSKLAGEEK---VASYTNNYVILRTAWVY 151 I+ P P+ YGKSK EEK ++S + VI+R +Y Sbjct: 108 GKNIEITDPMKIKPITDYGKSKAKAEEKLLNISSSSFKVVIIRPPMIY 155 >gi|261420562|ref|YP_003254244.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|319768231|ref|YP_004133732.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] gi|261377019|gb|ACX79762.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC61] gi|317113097|gb|ADU95589.1| NAD-dependent epimerase/dehydratase [Geobacillus sp. Y412MC52] Length = 315 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + A F D+ + AA V + D+P F + G + + Sbjct: 57 DIKDERLLAQLFHEHEYDLCYHLAASINVQDSIDDPRTTFYNDTIGTFYLLEQCRKHRTK 116 Query: 95 CIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++ST V+D T I E PT P + Y +K+A E V SY Y Sbjct: 117 LVFMSTCMVYDRCYHETGIAETHPTKPASPYAGAKIAAENMVLSYFYAY 165 >gi|157373248|ref|YP_001471848.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] gi|157315622|gb|ABV34720.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] Length = 367 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 11/107 (10%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------GIPCIYI 98 + PD+I++ AA + VD++ D P+ N G + +A+ S +I Sbjct: 78 YQPDIIMHLAAESHVDRSIDGPDEFIQTNILGTYTLLEASRSYLAELEGCKQQDFRFHHI 137 Query: 99 STDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 STD V+ L T + E SP NP + Y SK A + V ++ + + Sbjct: 138 STDEVYGDLGETGLFTEQSPYNPSSPYSASKAASDHLVRAWCRTFQL 184 >gi|239628660|ref|ZP_04671691.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47_FAA] gi|239518806|gb|EEQ58672.1| dTDP-glucose 4,6-dehydratase [Clostridiales bacterium 1_7_47FAA] Length = 340 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K S F + PDV++N AA + VD++ +PE N G + A + GI Sbjct: 59 DIADRKFIFSLFETEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACRTYGIK 118 Query: 95 CIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 119 RYHQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|284048368|ref|YP_003398707.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] gi|283952589|gb|ADB47392.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] Length = 305 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 ++ ++ F + +I+ AA T V + + PE +N G + + G+ I Sbjct: 54 IRSRELTDFLMEEKFQTVIHLAAQTLVPYSMEHPEADEDLNVTGLVHVLEGCRKSGVEQI 113 Query: 97 YISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 S+ G ++ P+ E P + YG SK GE+ + Y+ ++I R A VY Sbjct: 114 IFSSSAAIYGDNQNLPLLETEVPAPTSFYGLSKAVGEDYIRLYSRCFGLKHIIFRFANVY 173 Query: 152 S 152 Sbjct: 174 G 174 >gi|262384761|ref|ZP_06077893.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262293477|gb|EEY81413.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 636 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 19/127 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ + F PD + + AAY V ED PE + N +G IA A G Sbjct: 355 DICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEESVRNNVDGTRVIADLAVKYGTR 414 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAW 149 + +STD NP N+ G SK E V S + V RT + Sbjct: 415 KFVMVSTD--------------KAVNPTNVMGCSKRICEIYVQSLDQAIKDGKVRGRTQF 460 Query: 150 VYSIFGS 156 V + FG+ Sbjct: 461 VTTRFGN 467 >gi|227825088|ref|ZP_03989920.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] gi|226905587|gb|EEH91505.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] Length = 328 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 6/131 (4%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 + V++I+ D LK + D +++ AA + V ++ +P + N G Sbjct: 43 ETVQLIQGDLHDFTFLK-----HIMGQYEIDAVLHFAASSQVGESMVDPGKYYYNNVAGT 97 Query: 82 GAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + A G+ I + ST V+ + PI E P +P N YG++KL E + Y+ Sbjct: 98 LGLLDAMRESGVEYIVFSSTAAVYGEPDQVPITEDMPLHPTNSYGRTKLMIENMLRDYSM 157 Query: 141 NYVILRTAWVY 151 Y + A Y Sbjct: 158 AYGLHYVALRY 168 >gi|226293920|gb|EEH49340.1| UDP-glucose 4-epimerase [Paracoccidioides brasiliensis Pb18] Length = 374 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP+ D+ K DF F PD+ +I+ AA AV ++ ++P Sbjct: 40 SEEVINRIELICGIRPEFAKADVTKEADFDRVFEQH-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + ++ + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYHVNVCGSICLLRSMKRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K+A E + N Sbjct: 159 TKVAVETAITDMIN 172 >gi|254503785|ref|ZP_05115936.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia alexandrii DFL-11] gi|222439856|gb|EEE46535.1| 3-beta hydroxysteroid dehydrogenase/isomerase family [Labrenzia alexandrii DFL-11] Length = 324 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI N AA E + N GA I + A ++ + I ++ G Sbjct: 64 PDVIFNLAAVHRTPGHETHE--YYETNVAGATHICEFARALSVKKIVFTSSIAVYGPDEA 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVY 151 P +E +PT P + YG SKL E+ S+ VI R A V+ Sbjct: 122 PKEETTPTAPQSAYGWSKLLAEQIQQSWQQEAPDRKLVISRPAVVF 167 >gi|195953942|ref|YP_002122232.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933554|gb|ACG58254.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 330 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 22/164 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---------------DVEIIRVGRPDIDLLKP----KD 41 MK LV G G I V+ D+E ++ + +I K K+ Sbjct: 1 MKLLVTGGAGFIGSEFVRKAVKRGYEIVVVDKLTYAGDLERLKEVKENITFYKADITNKE 60 Query: 42 F-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 F F + P V+I+ AA + VD++ + N EG + A IG+ I I+ Sbjct: 61 FIEHIFKTEKPKVVIHFAAESHVDRSILDASPFIKTNVEGTQVLLDVAKDIGVEKFINIA 120 Query: 100 TDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TD V+ L + E SP P + Y SK A + +Y Y Sbjct: 121 TDEVYGELGQEGTFKEDSPLVPNSPYSSSKAAADMLGRAYYKTY 164 >gi|145593728|ref|YP_001158025.1| dTDP-4-dehydrorhamnose reductase [Salinispora tropica CNB-440] gi|145303065|gb|ABP53647.1| dTDP-4-dehydrorhamnose reductase [Salinispora tropica CNB-440] Length = 277 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 23/169 (13%) Query: 1 MKCLVIGNNGQIAQSL------------SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS 48 M LV+G +G + + + ++ Q V + V +D+ + + A+ Sbjct: 1 MDLLVVGGSGLLGREIVRQARRSGRQVAATFHRQVVPVAGVNWRKLDIRRRDEVAAVVNQ 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P IIN AAY D ++I A+G +A AA + + +S+D VF G + Sbjct: 61 LRPAAIIN-AAYRQDD---------WAITADGGMHVAAAAVANRARLVQVSSDAVFSGTA 110 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 DE +P + YG +K A E VI RT+ + GS+ Sbjct: 111 ER-YDETCSPDPTSPYGAAKAAVETATTGLDPGAVIARTSLIIGADGSS 158 >gi|146342982|ref|YP_001208030.1| UDP-glucose 4-epimerase [Bradyrhizobium sp. ORS278] gi|146195788|emb|CAL79815.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [Bradyrhizobium sp. ORS278] Length = 331 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ AS + +++ AA++AV ++ +P+ + N G + + G Sbjct: 54 DIADSIKIASTIRQYDVKAVMHFAAWSAVGESVADPQKYYLNNVAGTLGLLQGMREAGCT 113 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ R PI E + +N YG+SK E+ +A Y Y TA Y Sbjct: 114 RLVFSSTGAVYGNAGREPIPESAAGPTVNPYGRSKYMIEQILADYRAAYGFSATALRY 171 >gi|54309871|ref|YP_130891.1| polysaccharide biosynthesis protein [Photobacterium profundum SS9] gi|46914310|emb|CAG21089.1| hypothetical polysaccharide biosynthesis protein [Photobacterium profundum SS9] Length = 337 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 15/90 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA + G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNIDGAENVIHAALACGVKDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 P+N+YG +KLA ++ A+ N Sbjct: 131 -----KACAPINLYGATKLASDKLFAAANN 155 >gi|256843537|ref|ZP_05549025.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] gi|256614957|gb|EEU20158.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] Length = 330 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ G+ + Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAATYGIPKKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG++K+ E+ +A Sbjct: 128 PITEDTPLDPINPYGETKMMMEKIMA 153 >gi|206889234|ref|YP_002248313.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741172|gb|ACI20229.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 328 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F F PD +I+ AA V ++ EP + N + +A G+ Sbjct: 54 DLADKEKLRRVFEEFKPDAVIHFAASIVVPESVREPIKYYRNNFCNTLNLIEACIEQGVK 113 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 S+ G+ ++P+DE + P+N YG++K E +A + YV LR Sbjct: 114 NFLFSSSAAVYGIPEKSPVDETASLAPINPYGRTKAMVEHLLADLSQAEDFRYVSLR 170 >gi|299134000|ref|ZP_07027193.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] gi|298590747|gb|EFI50949.1| NAD-dependent epimerase/dehydratase [Afipia sp. 1NLS2] Length = 524 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 7/109 (6%) Query: 69 EPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKS 127 +PE+ IN + + A + G I+ S+ V+ T +DE S NP ++Y +S Sbjct: 251 DPELTIDINVTATKLVGEIAKACGAKRFIFASSCSVYGACDET-VDETSHFNPQSLYARS 309 Query: 128 KLAGEEKVAS-YTNNYVI--LRTAWVYSIFG-SNF-LLSMLRLAKERRE 171 K+A E + + +++++ + LR A VY I G + F L++ L AK R+ Sbjct: 310 KVASEALLGTLHSDDFAVTCLRFATVYGISGRTRFDLVANLLCAKAVRD 358 >gi|256841547|ref|ZP_05547054.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737390|gb|EEU50717.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 636 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 27/149 (18%) Query: 21 VQDVEIIRV-GRPDI-------DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 + DV ++ G PDI D+ + F PD + + AAY V ED PE Sbjct: 333 LHDVRLMMARGWPDIESYTVVSDICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEE 392 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + N +G IA + G + +STD NP N+ G SK Sbjct: 393 SVRNNVDGTRVIADLSVKYGTRKFVMVSTD--------------KAVNPTNVMGCSKRIC 438 Query: 132 EEKVASY----TNNYVILRTAWVYSIFGS 156 E V S + V RT +V + FG+ Sbjct: 439 EIYVQSLDQAIKDGKVRGRTQFVTTRFGN 467 >gi|85700210|gb|ABC74555.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii TA1] Length = 150 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P I++ AA V ++ +P + N G + AA + GI S+ GL ++ Sbjct: 7 PAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQS 66 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 P+DE P+N YG++K E+ +A Y + Y LR+ Sbjct: 67 VPLDETHRQVPINPYGRTKYIVEQALADY-DQYRSLRS 103 >gi|311694939|gb|ADP97812.1| UDP-glucose 4-epimerase [marine bacterium HP15] Length = 342 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL F + +++ AA V ++ P +S N + KA + +P Sbjct: 50 DLADEAAIEDLFSRHQFEAVLHFAANIVVPESVANPLKYYSNNTRNTLNLLKAVEKHEVP 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAW 149 ++ ST V+ +T + E P P+N YG SK+ E + A+ + NYVILR Sbjct: 110 YMVFSSTAAVYGMPEQTVLTEDLPLAPINPYGASKMMSERMIMDLAAASSLNYVILR--- 166 Query: 150 VYSIFGSN 157 +++ G+N Sbjct: 167 YFNVAGAN 174 >gi|295397289|ref|ZP_06807384.1| UDP-glucose 4-epimerase [Aerococcus viridans ATCC 11563] gi|294974495|gb|EFG50227.1| UDP-glucose 4-epimerase [Aerococcus viridans ATCC 11563] Length = 351 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 17/184 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID--LLKPKDFASFFLSFSPDVIINPAA 59 + L+ G N I SL + +++ + V D+ K KDF+ + DV+ + A Sbjct: 65 RVLITGKNSYIGTSLENWFMREPDKYIVDTVDMKDGSWKEKDFSLY------DVVFHVAG 118 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF--DGLSRTPIDEFS 116 V ++ + +N + A+ A + G+ I++S+ V+ S+ ID + Sbjct: 119 IAHVSSDPKMEDLYYKVNRDLTIETAEKAKAEGVKQFIFMSSIIVYGDSSGSKRVIDRNT 178 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 P N YG SKL EE + ++ V+LR +Y G + RLA ++I Sbjct: 179 VPTPSNFYGNSKLQAEEGIKDLESDDFKIVVLRPPMIY---GKGSKGNYPRLANMSKKIP 235 Query: 174 VVCD 177 V D Sbjct: 236 VFPD 239 >gi|282880805|ref|ZP_06289501.1| dTDP-glucose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] gi|281305339|gb|EFA97403.1| dTDP-glucose 4,6-dehydratase [Prevotella timonensis CRIS 5C-B1] Length = 382 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 17/123 (13%) Query: 37 LKPKDFA-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------- 88 ++ KD A F D ++N AA + VD++ ++P++ S+N G + AA Sbjct: 64 IRDKDLADKLFAEHDIDFVVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVMG 123 Query: 89 -DSIGIPCI-------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D+ G P +STD V+ L + E +P P + Y SK + + V +Y Sbjct: 124 KDAQGYPTWKAGKRYHQVSTDEVYGSLGAEGFFTEQTPLCPHSPYSASKTSADMIVMAYR 183 Query: 140 NNY 142 + Y Sbjct: 184 DTY 186 >gi|284052534|ref|ZP_06382744.1| hypothetical protein AplaP_13783 [Arthrospira platensis str. Paraca] gi|291571985|dbj|BAI94257.1| NAD-dependent epimerase/dehydratase [Arthrospira platensis NIES-39] Length = 341 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 20/193 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--------- 51 MK LV G +G + ++ Q E +++ D +P+D Sbjct: 1 MKHLVTGGSGFLGNLIARRLSQRGEEVKILDIWEDPTRPQDIEYINCDIRDRQGVAAAMK 60 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 D++ + A + K+ + + +N EG+ A+ A G+ I++S+ +F G Sbjct: 61 GVDIVHHNVALVPLTKSGKK---FWEVNVEGSRIAAEEAAQAGVSSFIHMSSSALF-GDP 116 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSMLR 164 + PI + P+ IYG++KLAGE V + +++R + + Sbjct: 117 QCPITNQTQPQPVEIYGRAKLAGELAVRQVCDRQGLPLIVIRPRTILGEGRLGIFQILFE 176 Query: 165 LAKERREISVVCD 177 KE R + V+ D Sbjct: 177 WIKEGRNVYVIGD 189 >gi|257466170|ref|ZP_05630481.1| UDP-glucose 4-epimerase [Fusobacterium gonidiaformans ATCC 25563] gi|315917328|ref|ZP_07913568.1| UDP-glucose 4-epimerase [Fusobacterium gonidiaformans ATCC 25563] gi|313691203|gb|EFS28038.1| UDP-glucose 4-epimerase [Fusobacterium gonidiaformans ATCC 25563] Length = 329 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%) Query: 37 LKPKDFASF-FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ ++F + F S D +I+ AA++ V ++ +EP F N G + KA + Sbjct: 52 LRDEEFLNHAFEKHSIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMKKYKVNH 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + PI E T P N YG+SKL E+ + Y I TA Y Sbjct: 112 IVFSSTAATYGEPENIPILETDTTFPTNPYGESKLCVEKMLKWCDKAYGIKYTALRY 168 >gi|209518629|ref|ZP_03267447.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] gi|209500912|gb|EEA00950.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] Length = 308 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R +D+ P + PD I++ AA + V ++P + +N G + +A + Sbjct: 56 RVKLDITSPDACRRVLETTRPDYIVHLAAISFV--GHNDPLDFYRVNVMGTLNLLEACAA 113 Query: 91 IG-IP--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +G +P + S+ V+ +S IDE P P+N Y SK A E V ++ + I+ Sbjct: 114 VGHVPRKLLIASSANVYGNVSSAAIDESFPLTPVNHYAASKAAMETMVRTWFDRLPIM 171 >gi|150375803|ref|YP_001312399.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150030350|gb|ABR62466.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 279 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLLSM 162 L+ P+DE P P ++Y +K GEE V ++T + + LR W+ + F ++ Sbjct: 125 LNYLPVDEHHPAQPQDVYAVTKWLGEEMVDAWTRRIGGSAISLRMPWIQTPESFMFEVAK 184 Query: 163 LRLAKE 168 RL +E Sbjct: 185 RRLTEE 190 >gi|110638800|ref|YP_679009.1| UDP-galactose 4-epimerase [Cytophaga hutchinsonii ATCC 33406] gi|110281481|gb|ABG59667.1| UDP-galactose 4-epimerase [Cytophaga hutchinsonii ATCC 33406] Length = 333 Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 14/118 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+LK ++ D +++ AA+ V ++ EP ++ N + + A G Sbjct: 61 IDILK---------TYKVDAVMHFAAFAYVGESVTEPTKYYNNNLAASITLLDAMREAGC 111 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I+ ST + PIDE P P+N YG SK E + Y + NY LR Sbjct: 112 KNIIFSSTCASYGSPKYMPIDEAHPQEPINPYGASKWMLERVIKDYHHAYGINYAFLR 169 >gi|257452030|ref|ZP_05617329.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_5R] gi|317058578|ref|ZP_07923063.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_5R] gi|313684254|gb|EFS21089.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_5R] Length = 329 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%) Query: 37 LKPKDFASF-FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L+ ++F + F S D +I+ AA++ V ++ +EP F N G + KA + Sbjct: 52 LRDEEFLNHAFEKHSIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMKKYKVNH 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + PI E T P N YG+SKL E+ + Y I TA Y Sbjct: 112 IVFSSTAATYGEPENIPILETDTTFPTNPYGESKLCVEKMLKWCDKAYGIKYTALRY 168 >gi|254462740|ref|ZP_05076156.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium HTCC2083] gi|206679329|gb|EDZ43816.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium HTCC2083] Length = 327 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL P I++ AA + V ++ D+P + + N G+ + +AA I Sbjct: 51 DLLDRARIDEVLAKHKPIAIMHFAALSQVGESMDDPGLYWRTNVMGSLNLIEAAVEADIK 110 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I+ ST + +DE S P+N YG SK A E + + Y + + Y Sbjct: 111 NFIFSSTCATYGDQDNVVLDENSVQQPINAYGASKRAVENILYDFERRYGLRHVIFRY 168 >gi|81428379|ref|YP_395379.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] gi|78610021|emb|CAI55069.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] Length = 330 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ AA++ V ++ P F N G A+ + + G+ ++ ST + PI Sbjct: 70 VIHFAAFSIVPESMQSPLKYFDNNTYGMTALLEVMNEFGVKRIVFSSTAATYGEPKAIPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG------------- 155 E P P N YG+SKL E + +Y +V LR +++ G Sbjct: 130 KESDPQVPTNPYGESKLMMETMMKWADKAYGIKFVALR---YFNVVGAKPDGSIGEDHHP 186 Query: 156 -SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ L +L++A +R ++S+ D + TP Sbjct: 187 ETHLLPIVLQVAAGKRDQLSIFGDDYDTP 215 >gi|116514776|ref|YP_813682.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094091|gb|ABJ59244.1| dTDP-glucose 4,6-dehydratase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 328 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + + GI Sbjct: 58 LDICDREGVYKLFEEEHPDVVVNFAAESHVDRSIENPEIFLQTNIIGTSVLMDSCRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|288942791|ref|YP_003445031.1| polysaccharide biosynthesis protein CapD [Allochromatium vinosum DSM 180] gi|288898163|gb|ADC63999.1| polysaccharide biosynthesis protein CapD [Allochromatium vinosum DSM 180] Length = 617 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 19/98 (19%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ F PDV+ + AAY V +D+ A N G IA AAD+ G Sbjct: 342 IDVTNATALDRLFAQRRPDVVFHAAAYKHVPLLQDQVLAALDNNVLGTRTIAAAADAWG- 400 Query: 94 PC---IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 C + ISTD NP N+ G SK Sbjct: 401 -CERFVLISTD--------------KAVNPTNVMGASK 423 >gi|77459049|ref|YP_348555.1| UDP-galactose 4-epimerase [Pseudomonas fluorescens Pf0-1] gi|77383052|gb|ABA74565.1| UDP-glucose 4-epimerase [Pseudomonas fluorescens Pf0-1] Length = 351 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 29/127 (22%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 20 CVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 C++ +E + + R D D+ P F + + +++ A+ +V+++ +P ++ Sbjct: 42 CIRRLEQLTLTRVDFIKGDIRDPVLLDDIFSRYDIEAVVHFASLKSVEESVRKPLDYYAN 101 Query: 77 NAEGAGAIAKA-ADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEK 134 N G + +A A + ++ S+ V+ + TPI ++F P+N YG++KL EE Sbjct: 102 NVAGTLDLCQAMARNNVFQLVFSSSATVYGEPANTPIAEDFGTGKPVNPYGRTKLMIEEL 161 Query: 135 VASYTNN 141 + N+ Sbjct: 162 LTDLCNS 168 >gi|293380796|ref|ZP_06626839.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|312978291|ref|ZP_07790034.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] gi|290922639|gb|EFD99598.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|310894810|gb|EFQ43881.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] Length = 330 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ +P + N G ++ +A + G+ + S+ G+ + Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAATYGIPKKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG++K+ E+ +A Sbjct: 128 PITEDTPLDPINPYGETKMMMEKIMA 153 >gi|288930747|ref|YP_003434807.1| NAD-dependent epimerase/dehydratase [Ferroglobus placidus DSM 10642] gi|288892995|gb|ADC64532.1| NAD-dependent epimerase/dehydratase [Ferroglobus placidus DSM 10642] Length = 307 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 21/165 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI----------DLLKPKDFASFFL 47 L+ G G I L+ V+ E +R+ G+ + DL PKD Sbjct: 3 LLTGGAGFIGSHLADKLVEMGERVRIIDNLSSGKLEYVNKNAEFIKGDLRNPKDVREALR 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + + AA V E +P+ + N + + GI I+ ST V+ Sbjct: 63 GVEE--VWHIAANPEVRLGEKDPKTIYENNLLATYILLEEMRKAGIERIIFTSTSTVYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P E T P++IYG +KL E ++SY + + + AW+Y Sbjct: 121 AEVIPTPEDYKTIPISIYGATKLGCEALISSYCHTFDM--QAWIY 163 >gi|226326716|ref|ZP_03802234.1| hypothetical protein PROPEN_00574 [Proteus penneri ATCC 35198] gi|225204937|gb|EEG87291.1| hypothetical protein PROPEN_00574 [Proteus penneri ATCC 35198] Length = 310 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +L S+ V D E R +D+ + F + PDV+++ AA + Sbjct: 31 VVVVDKLTYAGNLESLATVADSE--RYAFEQVDICDSAELDRLFAQYQPDVVMHLAAESH 88 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIPCIYISTDYVFDGLSRTP- 111 VD++ D P N G + +AA +ISTD V+ L T Sbjct: 89 VDRSIDGPAAFIETNIVGTYTLLEAARRFWQALPEGKKTAFRFHHISTDEVYGDLEGTDD 148 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 149 FFTETTPYAPSSPYSASKASSDHLVRAWLRTY 180 >gi|209528173|ref|ZP_03276644.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328] gi|209491382|gb|EDZ91766.1| NAD-dependent epimerase/dehydratase [Arthrospira maxima CS-328] Length = 341 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 16/144 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--------- 51 MK LV G +G + ++ Q E +++ D +P+D Sbjct: 1 MKHLVTGGSGFLGNLIARRLSQRGEEVKILDIWEDPTRPQDIEYINCDIRDRQGVAAAMK 60 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 D++ + A + K+ ++ + +N EG+ A+ A G+ I++S+ +F G Sbjct: 61 GVDIVHHNVALVPLTKSGNK---FWEVNVEGSRIAAEEAAKAGVSSFIHMSSSALF-GDP 116 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE 132 + PI + P+ IYG++KLAGE Sbjct: 117 KCPITNDTQPQPVEIYGRAKLAGE 140 >gi|317163437|gb|ADV15440.1| GDP-mannose 4,6-dehydratase [Dactylosporangium aurantiacum subsp. hamdenensis] Length = 332 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-- 92 DLL + + PD + N AA + V ++ +PE + G I +A ++ Sbjct: 58 DLLDQRSLIAAIEQCEPDEVYNLAAISYVPQSWRQPEATAEVTGVGVVRILEAIRTVSGV 117 Query: 93 ----------IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I S+ ++ TP +E +P +P + YG +K G SY +Y Sbjct: 118 RESQPGRGGQIRFYQASSSAMYGNARETPQNELTPLHPHSPYGVAKAYGHYMTKSYRESY 177 >gi|52840995|ref|YP_094794.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296785|ref|YP_123154.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Paris] gi|52628106|gb|AAU26847.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750570|emb|CAH11972.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila str. Paris] Length = 359 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+L S + D +++ AA + VD + D P+I N G + +AA Sbjct: 81 DILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLN 140 Query: 89 ----DSIGIPCIYISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D ++STD V+ L R T + + P +P Y SK + + V +Y Sbjct: 141 ERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSP---YSASKASSDHIVRAYY 197 Query: 140 NNY 142 + Y Sbjct: 198 HTY 200 >gi|148543576|ref|YP_001270946.1| UDP-galactose 4-epimerase [Lactobacillus reuteri DSM 20016] gi|184152983|ref|YP_001841324.1| UDP-glucose 4-epimerase [Lactobacillus reuteri JCM 1112] gi|194468123|ref|ZP_03074109.1| UDP-glucose 4-epimerase [Lactobacillus reuteri 100-23] gi|227363464|ref|ZP_03847586.1| UDP-galactose 4-epimerase [Lactobacillus reuteri MM2-3] gi|325681926|ref|ZP_08161444.1| UDP-glucose 4-epimerase [Lactobacillus reuteri MM4-1A] gi|148530610|gb|ABQ82609.1| UDP-galactose 4-epimerase [Lactobacillus reuteri DSM 20016] gi|183224327|dbj|BAG24844.1| UDP-glucose 4-epimerase [Lactobacillus reuteri JCM 1112] gi|194452976|gb|EDX41874.1| UDP-glucose 4-epimerase [Lactobacillus reuteri 100-23] gi|227071478|gb|EEI09779.1| UDP-galactose 4-epimerase [Lactobacillus reuteri MM2-3] gi|324978570|gb|EGC15519.1| UDP-glucose 4-epimerase [Lactobacillus reuteri MM4-1A] Length = 331 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 23/149 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +++ AA++ V ++ +P F N G + +A I I S+ G+ PI Sbjct: 70 VVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAATYGVPEHMPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG------------- 155 E P P+N YG SKL EE + +Y +V LR +++ G Sbjct: 130 KETDPQKPINPYGLSKLMMEEMMDWADKAYGIKFVALR---YFNVAGAAPDGTIGEDHGP 186 Query: 156 -SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + +L++A+ +R E+S+ D + TP Sbjct: 187 ETHLVPIILQVAQGKRDELSIFGDDYNTP 215 >gi|190889706|ref|YP_001976248.1| UDP-glucose 4-epimerase [Rhizobium etli CIAT 652] gi|190694985|gb|ACE89070.1| UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652] Length = 327 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 FSPD +I+ A V ++ + P + N G+ + +A I I S+ G+ Sbjct: 66 FSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLEACLDQDIDRIVFSSTCATYGVP 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 + PI E +P P+N YG++KL A E+ A+Y + LR Sbjct: 126 ASLPIREETPQQPVNPYGRTKLIFEMALEDFAAAYGIRFAALR 168 >gi|241258841|ref|YP_002978725.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863311|gb|ACS60974.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 324 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AED P +AF + AEG + +AA G+ + ++ GL+ T Sbjct: 75 DIVFHQAAIRITQCAED-PRLAFDVLAEGTFNVLEAAVKAGVSKVVAASSASVLGLAETF 133 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P E P N IYG +K E + S+ YV LR VY Sbjct: 134 PTTEAHHPYNNRTIYGAAKTFNEGLLRSFAEMYGLRYVALRYFNVYG 180 >gi|13471322|ref|NP_102891.1| NDP-glucose 4,6-dehydratase [Mesorhizobium loti MAFF303099] gi|14022067|dbj|BAB48677.1| NDP-glucose 4,6-dehydratase [Mesorhizobium loti MAFF303099] Length = 335 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 18/155 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI-----------DLLKPKDFASFF 46 M+ ++ G +G + + L+ V D E + + R D+ D+ A+ Sbjct: 1 MRHVIFGGDGFVGRHLAPKLVADGEEVIVADIARSDLAHYRNVRFVQCDVTDSASVAAVG 60 Query: 47 LSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 L + D++ N +A + + + F +N G I +A D G ++ +TD + Sbjct: 61 LK-AGDMVYNLSAKMLSPIQVRAKRHDFFFPVNFHGTEHIMQAMDRAGARKLVHYTTDMI 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + P+ E P PL YG SK EE A + Sbjct: 120 YGHTVTQPMTEEHPVAPLGEYGWSKQKTEELAAEW 154 >gi|218681311|ref|ZP_03529208.1| putative UDP-glucuronate 5'-epimerase [Rhizobium etli CIAT 894] Length = 338 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 3/112 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFD 105 L+ PD++I+ AA V + + PE N EG+ I + A I + + ST ++ Sbjct: 73 LAAKPDILIHLAAQAGVRYSLENPEAYLRSNVEGSWNIMEIARRAEIRHLMLASTSSIYG 132 Query: 106 GLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 + P E + PL IY +K + E SY + + I TA+ ++++G Sbjct: 133 ANATVPFHETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYG 184 >gi|256810425|ref|YP_003127794.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] gi|256793625|gb|ACV24294.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus fervens AG86] Length = 304 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI--STDYVFDGLSR 109 DV+ + AA V + + P +N G I + I I S V+ + Sbjct: 66 DVVFHQAAQINVRNSVENPMYDGDVNILGTINILEMMRKYDIDKIIFASSGGAVYGEPNY 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P+DE NPL+ YG SK GEE + Y Y ILR A VY Sbjct: 126 LPVDESHTINPLSPYGLSKYVGEEYIKLYNRLYGLEYAILRYANVYG 172 >gi|195952746|ref|YP_002121036.1| UDP-glucose 4-epimerase [Hydrogenobaculum sp. Y04AAS1] gi|195932358|gb|ACG57058.1| UDP-glucose 4-epimerase [Hydrogenobaculum sp. Y04AAS1] Length = 323 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 ++ K+ L F PD II+ AAY AV+++ EP + N + + + GI Sbjct: 52 MQSKETLEALLEFKPDAIIHFAAYIAVEESVQEPIKYYENNFCKSLKLLEYTLKAGIKNF 111 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 I+ ST V+ S P+ E P+ YG++K A EKV Sbjct: 112 IFSSTAAVYGIKSDKPVKETDSIEPITPYGQAK-ANFEKV 150 >gi|325279060|ref|YP_004251602.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] gi|324310869|gb|ADY31422.1| UDP-glucuronate 4-epimerase [Odoribacter splanchnicus DSM 20712] Length = 341 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 6/136 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + F S + D +IN AA V + + PE N G I + I Sbjct: 73 MDLCDKPALDALFASRTFDTVINLAAQAGVRYSLEHPETYIDSNVSGFLHILEGCRHHHI 132 Query: 94 P-CIYISTDYVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 P I+ S+ V+ + P E + +P++IY +K + E +Y+ Y V LR Sbjct: 133 PRLIFASSSSVYGNSTEVPFREDARADHPVSIYAATKKSNELMAYTYSRLYGLQTVGLRF 192 Query: 148 AWVYSIFGSNFLLSML 163 VY +G + ML Sbjct: 193 FTVYGPWGRPDMAPML 208 >gi|325278869|ref|YP_004251411.1| UDP-N-acetylglucosamine 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] gi|324310678|gb|ADY31231.1| UDP-N-acetylglucosamine 4,6-dehydratase [Odoribacter splanchnicus DSM 20712] Length = 340 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNIHGAQNVINAALQTGVKHVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|323703005|ref|ZP_08114661.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323532018|gb|EGB21901.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 306 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 3/124 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ P A F + P +I+ AA AV + +P +N G + +AA + + Sbjct: 50 MDITDP-GIAGIFEAARPQAVIHQAAQVAVPVSLRDPIFDARVNIIGTLNLLEAARRVKV 108 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 ++ S+ V+ + P+DE PL+ YG SK E + +Y Y + TA Y+ Sbjct: 109 GKMVFASSAAVYGNPNYLPVDEDHDLRPLSGYGISKHTVERYLEAYQELYGLSWTALRYA 168 Query: 153 -IFG 155 ++G Sbjct: 169 NVYG 172 >gi|300782497|ref|YP_003762788.1| epimerase/dehydratase [Amycolatopsis mediterranei U32] gi|299792011|gb|ADJ42386.1| epimerase/dehydratase [Amycolatopsis mediterranei U32] Length = 339 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 10/149 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA + P++ + IN + +AK A G+ +Y ST V+ Sbjct: 66 DAVIHLAALSNDPLGSLAPDLTYDINHHASVKLAKLAKDAGVQRYVYASTCSVYGAGGDN 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVAS-----YTNNYVILRTAWVYS--IFGSNFLLSML 163 +DE +P P+ Y +SK+ E V +T Y+ TA+ YS + G L ++ Sbjct: 126 LVDEDAPLRPVTPYAESKVRVEADVHELADDDFTPVYMRNATAFGYSPRLRGDIVLNNLT 185 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAI 192 A E+ V+ D GTP L A+ I Sbjct: 186 AHAHLSGEVLVLSD--GTPWRPLVHAQDI 212 >gi|23321128|gb|AAN23068.1| CDP-tyvelose epimerase [Yersinia pseudotuberculosis] Length = 338 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 73/195 (37%), Gaps = 44/195 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII------RVGRPDI---------------DLLK 38 MK L+ G G + +L+S ++ +E+I R G D D+ Sbjct: 1 MKLLITGGCGFLGSNLASHAIKSGMEVIVFDNLSRYGSSDNLKWLQSIGGFTYVHGDIRN 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--I 96 D F PD I + A A+ + D P++ F +N G + +A C I Sbjct: 61 RNDITRLIQKFKPDNIFHLAGQVAMTTSIDNPQMDFEVNVGGTFNLLEAIRLFNPECGII 120 Query: 97 YISTDYVFDGLSRTPI-------------DEFSPTNPLNI---YGKSKLAGEEKVASYTN 140 Y ST+ V+ L + D F + L YG SK A ++ + Y Sbjct: 121 YSSTNKVYGDLEQFTYRETDTRYECIEMPDGFDESTQLTFHSPYGCSKGAADQYMLDYAR 180 Query: 141 NY----VILRTAWVY 151 Y V+ R + +Y Sbjct: 181 IYGLKTVVFRHSSMY 195 >gi|309790903|ref|ZP_07685445.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] gi|308227017|gb|EFO80703.1| UDP-glucose 4-epimerase [Oscillochloris trichoides DG6] Length = 327 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 35 DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DL A F + PD+ I++ A+YT V ++ +P + N A + +AA + G Sbjct: 51 DLADRAALAQLFAA-HPDIDGIMHFASYTLVGESMQQPLLYLRDNLVNAANLLEAAVAAG 109 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 + I ST +FD ++ PIDE P + YG+SK Sbjct: 110 VRRFILSSTANLFDDPAKMPIDEHERIVPGSPYGESKF 147 >gi|190894599|ref|YP_001984892.1| putative UDP-glucose 4-epimerase [Rhizobium etli CIAT 652] gi|190700260|gb|ACE94342.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652] gi|327192522|gb|EGE59476.1| putative UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512] Length = 324 Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 7/106 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AE EP +AF + AEG + +AA G+ + ++ GL+ + Sbjct: 75 DIVFHQAAIRITQCAE-EPRLAFEVLAEGTFNVLEAAVKAGVSKVVAASSASVLGLAESF 133 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 ++ P N IYG +K E + S+ + YV LR VY Sbjct: 134 PTTEQHHPYNNRTIYGAAKTFNEGLLRSFADMYGLRYVALRYFNVY 179 >gi|209547836|ref|YP_002279753.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533592|gb|ACI53527.1| UDP-glucose 4-epimerase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 344 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ A+ GI Sbjct: 51 DVADPDVLKKIFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSASVEAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G +T P+ E + NP N YG+SKL E + ++Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQKTDLPVKETASLNPENPYGQSKLMTEFMLRDAASAYDFNYVALR 168 >gi|315427598|dbj|BAJ49197.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 315 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 65/161 (40%), Gaps = 20/161 (12%) Query: 3 CLVIGNNGQIAQSLS----SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 L G+N + LS S +DVE+I+ +I KD DV+I+ A Sbjct: 25 LLSKGHNVTVVDDLSAGRRSNIPEDVELIQKDVREIANDDVKD---------KDVVIHCA 75 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPI-DEF 115 A + K+ D P F NAEG + + IY S+ V + I DE Sbjct: 76 AQVSTFKSVDYPGEDFQRNAEGTFKLLETLRKHNPKALFIYTSSRSVHGNIPSPHIADEN 135 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P NP Y K+ GE Y NYVILR + VY Sbjct: 136 WPYNPSTFYNVHKIYGEMLCKIYNGLYGINYVILRPSNVYG 176 >gi|308177202|ref|YP_003916608.1| UDP-glucose 4-epimerase [Arthrobacter arilaitensis Re117] gi|307744665|emb|CBT75637.1| UDP-glucose 4-epimerase [Arthrobacter arilaitensis Re117] Length = 343 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 1/114 (0%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQ++ V ++DLL + SPD +++ A AV ++ +P + N G Sbjct: 44 VQNLTGREVAVYEMDLLDREPLMQLVSQLSPDAVVHFAGLKAVGESVSKPLQYYRNNVVG 103 Query: 81 AGAIAKAADSIG-IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + A + G ++ S+ V+ + P+ E + + N YG++KL EE Sbjct: 104 TLNLLDAMSATGCTSLVFSSSATVYGESTELPLVETTARSATNPYGRTKLHIEE 157 >gi|304406101|ref|ZP_07387758.1| UDP-glucose 4-epimerase [Paenibacillus curdlanolyticus YK9] gi|304344685|gb|EFM10522.1| UDP-glucose 4-epimerase [Paenibacillus curdlanolyticus YK9] Length = 329 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDFASFF 46 M LV G G I + +++++ + EI+ V G+ + L+ + F Sbjct: 1 MAVLVTGGAGYIGSHTVAALHERGEEIVIVDNLQQGHRDAILGGKLYVGDLRDEAFLDHV 60 Query: 47 LSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 S + D +I+ AA + V ++ P + N G + +A + G+ ++ ST + Sbjct: 61 FSENEIDSVIHFAANSLVGESMTNPGKYYHNNVYGTLCLLEAMNKHGVKRIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 R PI E T P N YG++KLA E+ + ++ YV LR Sbjct: 121 GEPERVPIAESDRTMPTNTYGETKLAMEKMMKWFDTAHGIRYVSLR 166 >gi|317472937|ref|ZP_07932241.1| polysaccharide biosynthesis protein [Anaerostipes sp. 3_2_56FAA] gi|316899549|gb|EFV21559.1| polysaccharide biosynthesis protein [Anaerostipes sp. 3_2_56FAA] Length = 614 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 18/118 (15%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K F + PD + + AA+ V E P A N G +AK+AD G I I Sbjct: 351 KKIDKVFHDYHPDTVYHAAAHKHVPLMETSPNEAIKNNVFGTFHVAKSADKYGAEKFILI 410 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 STD NP NI G +K E V ++ RT +V FG+ Sbjct: 411 STD--------------KAVNPTNIMGATKRICEMIVQTFGKKS---RTEFVAVRFGN 451 >gi|325680459|ref|ZP_08160008.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus albus 8] gi|324107828|gb|EGC02095.1| NAD dependent epimerase/dehydratase family protein [Ruminococcus albus 8] Length = 355 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F + P V++N AA V + D P++ N G I +A + +Y S+ Sbjct: 87 SIFAEYKPSVVVNLAAQAGVRYSIDHPDVYIESNIIGFYNILEACRHYPVEHLVYASSSS 146 Query: 103 VFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 V+ G + P +D+ NP+++Y +K + E SY+ Y I T ++++G Sbjct: 147 VYGGNKKVPFSVDD-KVDNPVSLYAATKKSNELLAHSYSKLYNIPSTGLRFFTVYG 201 >gi|13477054|ref|NP_108625.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] gi|14027818|dbj|BAB54411.1| UDP-glucose 4-epimerase [Mesorhizobium loti MAFF303099] Length = 310 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 23/199 (11%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF----------- 49 KCLV+G G I ++ + + + + GR P++ A F F Sbjct: 4 KCLVLGGGGFIGSNICRRLSAEGLSVTAFGRRKGIAPLPREIAWFEGDFRDNLAVTKALQ 63 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI--YISTDYVFDGL 107 S D +I+ T A+ + + + + A G+ I + S V+ + Sbjct: 64 SHDTVIHLVHSTWPSTADADMAADIRDSVIPSVELLDACVRSGVKRIIYFSSGGTVYGEV 123 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTA-----WVYSIFGSNF 158 PI E SPTNP+ YG SKL E V Y Y I+R A W Sbjct: 124 DEIPIREDSPTNPVGAYGVSKLMIEHYVRLYERKYGLNSFIVRLANPFGPWQVEAHNQGL 183 Query: 159 LLSMLRLAKERREISVVCD 177 + L + R+++V D Sbjct: 184 VAFAGHLIQSDRQVTVYGD 202 >gi|88810758|ref|ZP_01126015.1| probable nucleotide sugar dehydratase [Nitrococcus mobilis Nb-231] gi|88792388|gb|EAR23498.1| probable nucleotide sugar dehydratase [Nitrococcus mobilis Nb-231] Length = 309 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++ + AA A+ + P+ N +G I +AA G+ I+ ST V+ Sbjct: 56 DLVFHLAALIAIPYSYVAPDSYVDTNIKGTLNICQAAMENGVKRVIHTSTSEVYGTAQYV 115 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+ + S+ N + Sbjct: 116 PIDEKHPLQPQSPYSASKIGADAMAMSFYNAF 147 >gi|292492255|ref|YP_003527694.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus halophilus Nc4] gi|291580850|gb|ADE15307.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus halophilus Nc4] Length = 358 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 11/112 (9%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSI 91 A F + P +++ AA + VD++ D P + N G + + A Sbjct: 68 MAQLFAQYRPHAVLHLAAESHVDRSIDSPVDFINTNITGTYTLLETALDYWRKLDKSAQA 127 Query: 92 GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L T + E SP P + Y SK A + V ++ + Y Sbjct: 128 QFRFHHISTDEVFGSLGETGLFHEDSPYQPNSPYAASKAASDHLVRAWHHTY 179 >gi|197334123|ref|YP_002154942.1| UDP-N-acetylglucosamine 4,6-dehydratase [Vibrio fischeri MJ11] gi|197315613|gb|ACH65060.1| UDP-N-acetylglucosamine 4,6-dehydratase [Vibrio fischeri MJ11] Length = 337 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 15/90 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNIDGAENVITAALQCGVKDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 P+N+YG +KLA ++ A+ N Sbjct: 131 -----KACAPINLYGATKLASDKLFAAANN 155 >gi|78358730|ref|YP_390179.1| UDP-glucose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221135|gb|ABB40484.1| UDP-glucose 4-epimerase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 319 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A ++ + + D+P N E + + A G IY ST V+ Sbjct: 69 DAIFHIAGQSSGEVSFDDPAYDLRTNTESTLHLLRFARRTGCTRLIYASTMSVYGCQPDE 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFGSNFLLSMLR 164 P+ E +P PL+ YG KLA E + + + I TA +++++G + +R Sbjct: 129 PVHETAPAAPLSFYGVGKLASEHYLRLH-EQFGIRSTALRLFNVYGHGQNMDNMR 182 >gi|206890353|ref|YP_002249086.1| dTDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742291|gb|ACI21348.1| dTDP-glucose 4,6-dehydratase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 330 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+L ++ F P+ +++ AA T +D++ EP + N G + + A +G Sbjct: 53 NVDILDKEELRKIFEKQKPEAVLHFAAETNIDRSVIEPSVFMETNIIGTIYLLELAKELG 112 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + I I++ + + DE P NP + Y SK + + Sbjct: 113 VEKFINITSYEEYGDIKEGERDEDCPLNPRSPYAVSKASAD 153 >gi|284166287|ref|YP_003404566.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284015942|gb|ADB61893.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 309 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D++ + AA VD D P F N I +A G+ I Y ST V+ R Sbjct: 71 DLVFHLAASKHVDT--DRPHGQFDDNTRMTRNILEAMADAGVTEIAYTSTSTVYGEAPRP 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++++P P++ YG SKLA E +++ +++ + T W + Sbjct: 129 TPEDYAPLEPISAYGASKLADEGLLSARAHSHDL--TVWNF 167 >gi|225629315|ref|ZP_03787348.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo] gi|260167620|ref|ZP_05754431.1| epimerase/dehydratase family protein, putative [Brucella sp. F5/99] gi|261757046|ref|ZP_06000755.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99] gi|225615811|gb|EEH12860.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo] gi|261737030|gb|EEY25026.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99] Length = 336 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|6688597|emb|CAB65206.1| RmlB protein [Legionella pneumophila] Length = 351 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+L S + D +++ AA + VD + D P+I N G + +AA Sbjct: 81 DILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLN 140 Query: 89 ----DSIGIPCIYISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D ++STD V+ L R T + + P +P Y SK + + V +Y Sbjct: 141 ERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSP---YSASKASSDHIVRAYY 197 Query: 140 NNY 142 + Y Sbjct: 198 HTY 200 >gi|118581785|ref|YP_903035.1| polysaccharide biosynthesis protein CapD [Pelobacter propionicus DSM 2379] gi|118504495|gb|ABL00978.1| polysaccharide biosynthesis protein CapD [Pelobacter propionicus DSM 2379] Length = 651 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 22/117 (18%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F F P+V+ + AAY V E PE A + N G +A AA G+ + ISTD Sbjct: 359 FDEFLPEVVFHAAAYKHVPMMEANPEAAANNNVRGTRVVADAAHQFGVKHFVMISTD--- 415 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAWVYSIFGSN 157 NP NI G SK A E V + T NYV +R ++ GSN Sbjct: 416 -----------KAVNPTNIMGASKRAAELYVQNLARRSTTNYVTVRFG---NVLGSN 458 >gi|156603617|ref|XP_001618871.1| hypothetical protein NEMVEDRAFT_v1g224738 [Nematostella vectensis] gi|156200708|gb|EDO26771.1| predicted protein [Nematostella vectensis] Length = 345 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 15/95 (15%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F ++P+V+ + AAY V ED P IA N G + + + + G+ + +STD Sbjct: 60 LFEIYNPEVVFHAAAYKHVPLMEDNPSIAILNNVNGTKNLVELSQTNGVEKFVMVSTD-- 117 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 NP NI G SK E SY Sbjct: 118 ------------KAVNPTNIMGASKRIAEIFTQSY 140 >gi|170743782|ref|YP_001772437.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] gi|168198056|gb|ACA20003.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] Length = 386 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 9/153 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD-VIINPAAY 60 + +V+G G +++ +C + + D + L P D A+ P +I+P Sbjct: 117 RLVVLGRAGAYGGAIARLC--EARGLSAAVVDPEAL-PDDLAA-----QPAWAVIDPTGL 168 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 A+ P +F + +A +G + S+D VFDG + + E P P Sbjct: 169 PLAAAAKRYPGGSFRADIRRGERVAGLCAGVGARLLAFSSDLVFDGRTGSAAVESDPVRP 228 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 YG S+ A E + ++ RT+ V+ + Sbjct: 229 SGAYGASEAAREAGILGAHPGALVARTSVVFGL 261 >gi|306846072|ref|ZP_07478634.1| epimerase/dehydratase family protein [Brucella sp. BO1] gi|306273323|gb|EFM55184.1| epimerase/dehydratase family protein [Brucella sp. BO1] Length = 336 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|298376296|ref|ZP_06986252.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] gi|298267333|gb|EFI08990.1| capsular polysaccharide biosynthesis protein Cap5D [Bacteroides sp. 3_1_19] Length = 580 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 27/149 (18%) Query: 21 VQDVEIIRV-GRPDI-------DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 + DV ++ G PDI D+ + F PD + + AAY V ED PE Sbjct: 333 LHDVRLMMARGWPDIESYTVVSDICIRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEE 392 Query: 73 AFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + N +G IA + G + +STD NP N+ G SK Sbjct: 393 SVRNNVDGTRVIADLSVKYGTRKFVMVSTD--------------KAVNPTNVMGCSKRIC 438 Query: 132 EEKVASY----TNNYVILRTAWVYSIFGS 156 E V S + V RT +V + FG+ Sbjct: 439 EIYVQSLDQAIKDGKVRGRTQFVTTRFGN 467 >gi|260779640|ref|ZP_05888530.1| UDP-N-acetylglucosamine 4,6-dehydratase [Vibrio coralliilyticus ATCC BAA-450] gi|260604449|gb|EEX30753.1| UDP-N-acetylglucosamine 4,6-dehydratase [Vibrio coralliilyticus ATCC BAA-450] Length = 356 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 99 DVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALQCGVKDVVALSTD--------- 149 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KLA +K+ + NN Sbjct: 150 -----KACAPINLYGATKLAS-DKLFTAANN 174 >gi|257064136|ref|YP_003143808.1| dTDP-glucose 4,6-dehydratase [Slackia heliotrinireducens DSM 20476] gi|256791789|gb|ACV22459.1| dTDP-glucose 4,6-dehydratase [Slackia heliotrinireducens DSM 20476] Length = 356 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 14/123 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + + F F D ++N AA + VD++ P+ N +G + + A Sbjct: 60 VDICDREAVKAVFDEFDVDYVVNFAAESHVDRSIANPQAFVETNVDGTVNMLQCAKEAWL 119 Query: 92 --------GIPCIYISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYT 139 G+ + +STD V+ LS DEF P +P + Y SK + + V ++ Sbjct: 120 TGDDTYKDGVKYLQVSTDEVYGTLSLDRPDEFFVETRPLDPHSPYSASKASADFFVKAFG 179 Query: 140 NNY 142 + Y Sbjct: 180 DTY 182 >gi|227824404|ref|ZP_03989236.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] gi|226904903|gb|EEH90821.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] Length = 333 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 6/116 (5%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F SP +++N AA V + D P N G I +A + +Y S+ V+ Sbjct: 79 FTKLSPKIVVNLAAQAGVRYSIDHPRDYIDSNIVGFFTILEACRHHSVNHLVYASSSSVY 138 Query: 105 DGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 +TP P + P+++Y +K + E +Y++ Y + LR VY FG Sbjct: 139 GNQEKTPFSVTDPVDHPISLYAATKKSNELMAYTYSHLYGVPTTGLRFFTVYGPFG 194 >gi|254712621|ref|ZP_05174432.1| epimerase/dehydratase family protein, putative [Brucella ceti M644/93/1] gi|254715692|ref|ZP_05177503.1| epimerase/dehydratase family protein, putative [Brucella ceti M13/05/1] gi|261217443|ref|ZP_05931724.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1] gi|261320317|ref|ZP_05959514.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1] gi|260922532|gb|EEX89100.1| NAD-dependent epimerase/dehydratase [Brucella ceti M13/05/1] gi|261293007|gb|EEX96503.1| NAD-dependent epimerase/dehydratase [Brucella ceti M644/93/1] Length = 336 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|114706639|ref|ZP_01439540.1| NDP-glucose 4,6-dehydratase [Fulvimarina pelagi HTCC2506] gi|114538031|gb|EAU41154.1| NDP-glucose 4,6-dehydratase [Fulvimarina pelagi HTCC2506] Length = 337 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 18/149 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI-----------DLLKPKDFASFF 46 M+ ++ G +G + + L+ QD E + + + + D+ P A Sbjct: 1 MRHILFGGDGFVGRHLAKKLNQDGEEAIVADIAKGEFAHYASVRHIHCDVTDPASIAKVG 60 Query: 47 LSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 L + D++ N +A + + E + +N +G I +A D G ++ +TD + Sbjct: 61 LE-ADDIVYNLSAKMLSPLQVRAKRREFFYPVNYDGTKNIIEAMDKAGASKLVHFTTDMI 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + P+ E P PL YG+SKL E Sbjct: 120 YGHTVTHPMTEEHPVAPLGEYGQSKLDTE 148 >gi|94987508|ref|YP_595441.1| dTDP-D-glucose 4,6-dehydratase [Lawsonia intracellularis PHE/MN1-00] gi|94731757|emb|CAJ55120.1| dTDP-D-glucose 4,6-dehydratase [Lawsonia intracellularis PHE/MN1-00] Length = 339 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 28/172 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRV------GRP----DIDLLKPKDF----- 42 M+ L+ G G I + + ++ DV I+ + G P +I+ KP + Sbjct: 1 MQLLITGGCGFIGTNFIQLALKELKDVYIVNLDNLTYAGNPYNLKEIETTKPDQYLFIHG 60 Query: 43 --------ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 S S+S D IIN AA + VD++ + N G + AA ++ +P Sbjct: 61 DIGNATLVQSLLQSYSFDAIINFAAESHVDRSITNALPFITTNILGTQILLDAARAMNVP 120 Query: 95 -CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 I ISTD V+ L E +P +P + Y SK + + V + Y I Sbjct: 121 KFIQISTDEVYGSLGINGKFSEKTPLSPNSPYSASKASADMLVHAAYKTYGI 172 >gi|85717075|ref|ZP_01048036.1| UDP glucose 4-epimerase protein [Nitrobacter sp. Nb-311A] gi|85696113|gb|EAQ34010.1| UDP glucose 4-epimerase protein [Nitrobacter sp. Nb-311A] Length = 336 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 S+ P I++ A V + +P F N G+ + AA I + S+ G+ Sbjct: 64 SYKPIAIVHLAGLIDVGLSVKKPIDFFDSNLAGSTTLFAAAMQARIDKLVFSSTCATYGI 123 Query: 108 S-RTPIDEFSPTNPLNIYGKSKLAGEE--KVASYTNNY--VILR 146 + PI E P +P+N YGKSKL E+ K + N++ VILR Sbjct: 124 PLQVPIREDHPQSPINPYGKSKLMVEQILKELQFRNDFRSVILR 167 >gi|313675118|ref|YP_004053114.1| nad-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] gi|312941816|gb|ADR21006.1| NAD-dependent epimerase/dehydratase [Marivirga tractuosa DSM 4126] Length = 309 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA A+ +P N G + A + + I+ S+ VF G S Sbjct: 76 DTVIHLAAKVTTPFADADPHYFEQSNHWGTAELVYAVEESEVDHFIFASSVSVF-GSSTD 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVY 151 I E NP IYG SKL GEE VA + N ILR VY Sbjct: 135 LIGENHHPNPRTIYGISKLRGEEHVARLMDKINTQILRLGNVY 177 >gi|310286572|ref|YP_003937830.1| dTDP-glucose 4,6-dehydratase involved rhamnose biosynthesis [Bifidobacterium bifidum S17] gi|309250508|gb|ADO52256.1| dTDP-glucose 4,6-dehydratase involved rhamnose biosynthesis [Bifidobacterium bifidum S17] Length = 340 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + PE N EG + +A G+ ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVRKYGVRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 141 PAKFTESTPYHPSSPYSSTKAASDMLVRAWTRTYGLRTT 179 >gi|310643671|ref|YP_003948429.1| udp-n-acetylglucosamine 4,6-dehydratase [Paenibacillus polymyxa SC2] gi|309248621|gb|ADO58188.1| UDP-N-acetylglucosamine 4,6-dehydratase [Paenibacillus polymyxa SC2] Length = 326 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 65/187 (34%), Gaps = 52/187 (27%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS------------- 48 K LV G G Q L++ E+++ G +I + +FA + Sbjct: 6 KLLVTGGTGSWGQRLTA------ELLKEGPTEIRIFSRGEFAQIAMQRQFQSDPRLNFMI 59 Query: 49 -------------FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 D + + AA V E +PE AF N G + +A+ G+ Sbjct: 60 GDIRDLQALQEACHGVDYVFHLAALKHVPVCEKQPEEAFKTNVHGTENVIRASIEQGVAK 119 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILRTAW 149 I +STD D P+N+YG +K GE S +V +R Sbjct: 120 VIDVSTDKAVD--------------PVNVYGMTKAIGERLMIRANALSERTRFVCIRGGN 165 Query: 150 VYSIFGS 156 V GS Sbjct: 166 VLGTSGS 172 >gi|271970374|ref|YP_003344570.1| dTDP-4-dehydrorhamnose reductase-like protein [Streptosporangium roseum DSM 43021] gi|270513549|gb|ACZ91827.1| dTDP-4-dehydrorhamnose reductase-like protein [Streptosporangium roseum DSM 43021] Length = 272 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 23/162 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRP------DIDLLKPKDFASFFLS 48 M+ L++G +G + L+ C V + R G+ +D+ + +D + + Sbjct: 1 MRFLIVGGSGFLGGELARQCLVARHEVAATYLTRSGKTASVEWLPLDVRRREDVDALIST 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P+V+IN AA+ D ++ A GA +A AA + G +++S+D VF G + Sbjct: 61 FRPEVVIN-AAFRQTD---------WATTAIGAANVALAASAAGGRLVHVSSDAVFSGAA 110 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 DE +P++ YG +K A E V + V RT+ + Sbjct: 111 -IRYDETCVPDPISPYGAAKAAAETAVNAIAPTAVTARTSLI 151 >gi|254732048|ref|ZP_05190626.1| epimerase/dehydratase family protein, putative [Brucella abortus bv. 4 str. 292] gi|260759827|ref|ZP_05872175.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str. 292] gi|260670145|gb|EEX57085.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str. 292] Length = 336 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 18/155 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDI-----------DLLKPKDFASFF 46 M+ ++ G +G + + L+ + D V + + + D+ D+ P+ Sbjct: 1 MRHIIFGGDGFVGRYLAPQLLADGHEVIVADIVKSDLAHYGDATFVHTDVTDPESIRKLG 60 Query: 47 LSFSPDVIINPAA--YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + + DV+ N +A + + + F +N G I KA D+ G ++ +TD V Sbjct: 61 IR-ADDVVYNLSAKMLSPIQVRAKRHDFFFPVNYYGTENIIKAMDAAGAKKLVHFTTDMV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + P E P PL YG SKL EE A + Sbjct: 120 YGHTYVWPQKEDHPCKPLGEYGLSKLKTEELAAQW 154 >gi|218682004|ref|ZP_03529605.1| UDP-glucose 4-epimerase [Rhizobium etli CIAT 894] Length = 346 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 5/160 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 CL + N G + E ++ G + D+ P I++ AA Sbjct: 20 CLDLANKGYKPVVFDNFSNGHREFVKWGPAEEGDIRDRARLDEVLAKHKPAAILHFAALI 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNP 120 V ++ +P + N G + AA + G+ S+ GL ++ P+DE P Sbjct: 80 EVGESVKDPVSFYENNVIGTLTLLSAAQAAGVNAFVFSSTCATYGLPQSVPLDETHRQVP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWV--YSIFGSNF 158 +N YG++K E+ +A Y + Y LR+ + ++ G++F Sbjct: 140 INPYGRTKYIVEQALADY-DQYRSLRSVVLRYFNAAGADF 178 >gi|221065021|ref|ZP_03541126.1| UDP-glucose 4-epimerase [Comamonas testosteroni KF-1] gi|220710044|gb|EED65412.1| UDP-glucose 4-epimerase [Comamonas testosteroni KF-1] Length = 336 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +++ A AV ++ P + N G + +A ++ I ++ S+ V+ Sbjct: 75 DSVVHFAGKKAVGESSTHPLDYYDNNVNGTLVLLRAMHNLAIHKLVFSSSATVYGTPQYL 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 P DE PT +N YG++KL EE +A Sbjct: 135 PYDEKHPTAAMNPYGRTKLMAEEILA 160 >gi|51893849|ref|YP_076540.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] gi|51857538|dbj|BAD41696.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] Length = 328 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 8/128 (6%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 + ++C +V I VG D D L+ A F D +++ AA + V ++ EP + F Sbjct: 34 MEAVCDSEVIIGDVG--DRDKLRTVLQARRF-----DGVVHLAAASLVAESMREPSVYFR 86 Query: 76 INAEGAGAIAKAADSIGIPCIYIS-TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEK 134 N + + +P + +S T V+ PI E PT P N YG+SKL E Sbjct: 87 NNVSASIVLFDELIRADVPWVVLSSTAAVYGEPEVVPIPEEHPTRPTNPYGESKLMLERI 146 Query: 135 VASYTNNY 142 + Y Y Sbjct: 147 LKWYDVAY 154 >gi|262163805|ref|ZP_06031545.1| dTDP-glucose 4,6-dehydratase [Vibrio mimicus VM223] gi|262027785|gb|EEY46450.1| dTDP-glucose 4,6-dehydratase [Vibrio mimicus VM223] Length = 354 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 13/142 (9%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 A +L S+C D R +D+ + F PD +++ AA + VD++ D P Sbjct: 37 AGNLESLCDVDGHE-RYTFEQVDICNREQLDRVFAEHQPDAVMHLAAESHVDRSIDGPAA 95 Query: 73 AFSINAEGAGAIAKAA----------DSIGIPCIYISTDYVFDGLSRTP--IDEFSPTNP 120 N G + +AA + +ISTD V+ L T E +P P Sbjct: 96 FIETNIVGTYTLLEAARHYWNSLEDERKLTFRFHHISTDEVYGDLEGTDDLFTEETPYAP 155 Query: 121 LNIYGKSKLAGEEKVASYTNNY 142 + Y SK + + V S+ Y Sbjct: 156 SSPYSASKASSDHLVRSWLRTY 177 >gi|119485401|ref|ZP_01619729.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] gi|119457157|gb|EAW38283.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] Length = 332 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 13/150 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G+ + Q L VE+I D LL + F D +++ AAY Sbjct: 35 LDNLVYGHRDVVEQVLK------VELIVGDTNDRQLLD-----NLFSMRKIDAVMHFAAY 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTN 119 V ++ P+ + N G + +A I ++ ST + + PI E P N Sbjct: 84 AYVGESVSAPDKYYRNNVVGTLTLLEAMKDASINKFVFSSTCATYGIPQQVPIPEDHPQN 143 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 P+N YG +KL E+ ++ + + Y ++ W Sbjct: 144 PINPYGMTKLMVEKILSDFDHAY-DFKSVW 172 >gi|17988785|ref|NP_541418.1| dTDP-glucose 4,6-dehydratase [Brucella melitensis bv. 1 str. 16M] gi|225686614|ref|YP_002734586.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis ATCC 23457] gi|256043721|ref|ZP_05446644.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis bv. 1 str. Rev.1] gi|256111231|ref|ZP_05452267.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis bv. 3 str. Ether] gi|256262250|ref|ZP_05464782.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 2 str. 63/9] gi|260564911|ref|ZP_05835396.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str. 16M] gi|265990145|ref|ZP_06102702.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str. Rev.1] gi|265992747|ref|ZP_06105304.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str. Ether] gi|17984602|gb|AAL53682.1| dtdp-glucose 4,6-dehydratase [Brucella melitensis bv. 1 str. 16M] gi|225642719|gb|ACO02632.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis ATCC 23457] gi|260152554|gb|EEW87647.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str. 16M] gi|262763617|gb|EEZ09649.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 3 str. Ether] gi|263000814|gb|EEZ13504.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 1 str. Rev.1] gi|263091950|gb|EEZ16272.1| NAD-dependent epimerase/dehydratase [Brucella melitensis bv. 2 str. 63/9] gi|326411003|gb|ADZ68067.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis M28] gi|326554294|gb|ADZ88933.1| UDP-glucuronic acid decarboxylase 1 [Brucella melitensis M5-90] Length = 336 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|163846789|ref|YP_001634833.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222524607|ref|YP_002569078.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] gi|163668078|gb|ABY34444.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222448486|gb|ACM52752.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl] Length = 342 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DI L D F D +++ A + + E+ F IN +G+ +A+AA + G Sbjct: 54 DIRRLTVSDLVGF------DAVVHMAELSNDPLGQLNRELTFQINHQGSVKLAQAAKAAG 107 Query: 93 IP-CIYISTDYVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRT 147 + +Y+S+ V+ I E SP NP Y + K+ E +A ++ V LR Sbjct: 108 VTRFVYMSSCSVYGIGEEGEIKTEESPVNPQTAYAECKVLVERDLAQLADDSFSPVFLRN 167 Query: 148 AWVYSIFGSN-------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 A + FG + L ++ LA +I++V D GTP L I+ IAH Sbjct: 168 A---TAFGPSPRQRFDVVLNNLAGLAWTTGKIAMVSD--GTPWRPLV---HILDIAH 216 >gi|325285206|ref|YP_004260996.1| NAD-dependent epimerase/dehydratase [Cellulophaga lytica DSM 7489] gi|324320660|gb|ADY28125.1| NAD-dependent epimerase/dehydratase [Cellulophaga lytica DSM 7489] Length = 277 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 19/158 (12%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSI 153 +++S+ VFD S+ P E T L+IYG+ K+ E + N +I+R V Sbjct: 101 LLFLSSANVFDAYSKYPSYELDKTLSLSIYGRLKIKIENMLLRLPKNKAIIIRLPMV--- 157 Query: 154 FGSNF--LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 FG+N + + L + + + V F + + Q H +I + T GIF Sbjct: 158 FGNNTPRIKEIKTLLQNKEPVEV----FPNLVFNVTYIDKLTQQLHYIINHKKT---GIF 210 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVY-RIFT 248 H+ ++ V DF + E + G Y+ VY R+FT Sbjct: 211 HLGSE-DLVHHEDFIK----EIVSKIGLYNPVYKRVFT 243 >gi|318056070|ref|NP_001187764.1| UDP-glucose 4-epimerase [Ictalurus punctatus] gi|308323913|gb|ADO29092.1| UDP-glucose 4-epimerase [Ictalurus punctatus] Length = 349 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 15/147 (10%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL F S +++ A AV ++ ++P + +N G + + + G Sbjct: 64 ELDLLDKSGLEKIFSQNSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQAHG 123 Query: 93 IPCI-YISTDYVFDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + I + S+ V+ + PIDE P TNP YGK+K EE + N Sbjct: 124 VHNIVFSSSATVYGDPQKLPIDEQHPAGGCTNP---YGKTKFFIEEMIRDQCN----AEK 176 Query: 148 AWVYSIFGSN---FLLSMLRLAKERRE 171 W +F ++ L S RL K RE Sbjct: 177 DWNAVLFSTSTPLVLTSRARLVKILRE 203 >gi|260887529|ref|ZP_05898792.1| GDP-mannose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|330837908|ref|YP_004412488.1| GDP-mannose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|260862704|gb|EEX77204.1| GDP-mannose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] gi|329745672|gb|AEB99028.1| GDP-mannose 4,6-dehydratase [Selenomonas sputigena ATCC 35185] Length = 344 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 7/137 (5%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 + + +C+ D+ + DL + S PD + N A + V + + PE Sbjct: 41 ERIDHICISDLMDEKFFLHYGDLTDSCNLLSLLGQIRPDEVYNLGAQSHVAVSFEVPE-- 98 Query: 74 FSINAEGAGAIA--KAADSIGIPCIYI--STDYVFDGLSRT-PIDEFSPTNPLNIYGKSK 128 ++ +A G G I +A GI C + ST +F GL T P E +P P + YG +K Sbjct: 99 YTADATGVGTIRLLEAIRQSGIQCKFYQASTSELFGGLPNTAPQSERTPFYPKSPYGAAK 158 Query: 129 LAGEEKVASYTNNYVIL 145 L +Y +Y + Sbjct: 159 LYSYWITVNYRESYGLF 175 >gi|254720275|ref|ZP_05182086.1| epimerase/dehydratase family protein, putative [Brucella sp. 83/13] gi|265985292|ref|ZP_06098027.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13] gi|306838584|ref|ZP_07471420.1| epimerase/dehydratase family protein [Brucella sp. NF 2653] gi|306841581|ref|ZP_07474279.1| epimerase/dehydratase family protein [Brucella sp. BO2] gi|264663884|gb|EEZ34145.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13] gi|306288418|gb|EFM59777.1| epimerase/dehydratase family protein [Brucella sp. BO2] gi|306406227|gb|EFM62470.1| epimerase/dehydratase family protein [Brucella sp. NF 2653] Length = 336 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|254703179|ref|ZP_05165007.1| UDP-glucuronic acid decarboxylase 1 [Brucella suis bv. 3 str. 686] gi|261753802|ref|ZP_05997511.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] gi|261743555|gb|EEY31481.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686] Length = 175 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|238062589|ref|ZP_04607298.1| UDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149] gi|237884400|gb|EEP73228.1| UDP-glucose 4-epimerase [Micromonospora sp. ATCC 39149] Length = 327 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDLLK-PKDFASFFLS 48 MK LV G G I ++ M + ++ +R G PD + P A+ L+ Sbjct: 1 MKLLVTGGAGYIGSVVTRMLLDAGHEVVVLDDLRTGHRAALAPDATWVDAPIHDAAQVLT 60 Query: 49 FSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +++ AA A ++ +PE+ + N G+ A+ A + +P ++ ST V+ Sbjct: 61 PGAGFDGVLHFAALIAAGESMVKPELYWHNNTVGSLALIDAVRAARVPRMVFSSTAAVYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLA 130 + PI E + P N YG +KLA Sbjct: 121 NPAELPIPETAVKAPTNTYGATKLA 145 >gi|224284000|ref|ZP_03647322.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium bifidum NCIMB 41171] gi|313141151|ref|ZP_07803344.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] gi|313133661|gb|EFR51278.1| DTDP-glucose 4,6-dehydratase enzyme [Bifidobacterium bifidum NCIMB 41171] Length = 340 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + PE N EG + +A G+ ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVRKYGVRYHHVSTDEVYGDLALDD 140 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y + T Sbjct: 141 PAKFTESTPYHPSSPYSSTKAASDMLVRAWTRTYGLRTT 179 >gi|153010290|ref|YP_001371504.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] gi|151562178|gb|ABS15675.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC 49188] Length = 335 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Query: 74 FSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D++G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAVGANKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 E 133 E Sbjct: 149 E 149 >gi|332023616|gb|EGI63847.1| Uncharacterized protein [Acromyrmex echinatior] Length = 1841 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Query: 149 WVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 W+ S S FL +R +R EI ++ +FG P+ AL +I+++AH L ++D +L Sbjct: 573 WLNSELLSLFLFHEMRPLDKREEIHIIRSKFGEPSQALL---SIVELAHVLRSSNDPTLH 629 Query: 209 GI 210 + Sbjct: 630 SL 631 >gi|320161109|ref|YP_004174333.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] gi|319994962|dbj|BAJ63733.1| NAD-dependent epimerase/dehydratase family protein [Anaerolinea thermophila UNI-1] Length = 332 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 23/164 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-----GRPDIDLLK----------------PK 40 + LV G G IA L V +R R DI LL+ + Sbjct: 10 RVLVTGAGGFIASHLVEQLVIQGATVRAFVRYNSRGDIGLLRFIPEQVLRQVEVRFGDLR 69 Query: 41 DFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 D+ + + DV+ + A A+ + P N G + +A IGI ++ Sbjct: 70 DYNAVVGALKGTDVVFHLGALIAIPYSYLHPREVVETNVLGTLNVLQACREIGISRLVHT 129 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ST V+ TP+DE P + + Y SK+ ++ V S+ Y Sbjct: 130 STSEVYGTGLYTPMDEKHPLHAQSPYAASKIGADKLVESFYCTY 173 >gi|289547908|ref|YP_003472896.1| GDP-mannose 4,6-dehydratase [Thermocrinis albus DSM 14484] gi|289181525|gb|ADC88769.1| GDP-mannose 4,6-dehydratase [Thermocrinis albus DSM 14484] Length = 343 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL++ + PD + N AA + V + ++P + +NA G I +A S+ Sbjct: 58 MDLMELTNIMRVIEKIQPDEVYNLAAQSFVSASFEQPILTAEVNAIGVLRILEAIRSLKP 117 Query: 94 PCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 + ST +F P +E +P P + YG +KL G +Y ++ I Sbjct: 118 DTKFYQASTSEMFGKAQEIPQNEKTPFYPRSPYGVAKLFGHWITVNYRESFGIF 171 >gi|212212715|ref|YP_002303651.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] gi|212011125|gb|ACJ18506.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuG_Q212] Length = 331 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 97 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATK 156 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y N Y V LR VY Sbjct: 157 IAGEAMATAYHNRYGLPFVGLRYMNVYG 184 >gi|160881616|ref|YP_001560584.1| polysaccharide biosynthesis protein CapD [Clostridium phytofermentans ISDg] gi|160430282|gb|ABX43845.1| polysaccharide biosynthesis protein CapD [Clostridium phytofermentans ISDg] Length = 627 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 18/118 (15%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K F ++ P+++ + AA+ V ED P A N G A+AAD G+ + I Sbjct: 354 KRLDKIFDTYRPNIVYHAAAHKHVPLMEDSPNEAVKNNVFGTFKTAQAADKYGVEKFVLI 413 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 S+D NP NI G +K E V ++ +T +V FG+ Sbjct: 414 SSD--------------KAVNPTNIMGATKRMCEMIVQTFNRKS---KTEFVAVRFGN 454 >gi|85707417|ref|ZP_01038498.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. 217] gi|85668073|gb|EAQ22953.1| dTDP-glucose 4,6-dehydratase [Roseovarius sp. 217] Length = 349 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 11/108 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGIP----CIY 97 F +P+ +++ AA + VD++ D P N G + +AA ++G P + Sbjct: 68 FAEHAPEAVLHLAAESHVDRSIDGPGAFVETNITGTYNLLEAARGHWQALGKPDSFRFQH 127 Query: 98 ISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L P +F +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVYGSLPADPSVKFTENTPYDPRSPYSASKAASDHLVRAWHETY 175 >gi|331701742|ref|YP_004398701.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] gi|329129085|gb|AEB73638.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] Length = 334 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 24/167 (14%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 ++ KDF + F + +I+ AA++ V ++ ++P F N G ++ + ++ + Sbjct: 52 VRDKDFMNQVFDKEEIEGVIHFAAFSVVPESMEKPLKYFDNNTGGMISLLEVMNAHNVKK 111 Query: 96 I-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV 150 I + ST + + PI E P P N YG+SKLA E+ + +Y +V LR Sbjct: 112 IVFSSTAATYGEPKQIPIKETDPQVPTNPYGESKLAMEKIMHWSDVAYGIKFVALR---Y 168 Query: 151 YSIFG--------------SNFLLSMLRLAK-ERREISVVCDQFGTP 182 +++ G ++ + +L++A ER E+++ D + TP Sbjct: 169 FNVAGAKPDGSIGEDHHPETHLVPIILQVAAGERDELTIFGDDYDTP 215 >gi|323698128|ref|ZP_08110040.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. ND132] gi|323458060|gb|EGB13925.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans ND132] Length = 338 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA + VD++ ++P + N GA + + A GI +++STD V+ L Sbjct: 77 DAVVNFAAESHVDRSINDPSPFVTTNVGGAQNLMECARQCGIGRFVHVSTDEVYGTLG-- 134 Query: 111 PIDEFSPTNPL---NIYGKSKLAGEEKVASYTNNY 142 P +F+ T PL + Y SK + +Y Y Sbjct: 135 PSGKFTETTPLAPNSPYSASKAGADLMARAYFETY 169 >gi|313672091|ref|YP_004050202.1| polysaccharide biosynthesis protein capd [Calditerrivibrio nitroreducens DSM 19672] gi|312938847|gb|ADR18039.1| polysaccharide biosynthesis protein CapD [Calditerrivibrio nitroreducens DSM 19672] Length = 606 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F S+ PD++I+ AAY V E P+ A N G IA + + I ISTD Sbjct: 349 QLFKSYKPDIVIHAAAYKHVPMMELNPDEAIWNNIFGTKVIADLSCKYEVDKFILISTD- 407 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP NI G +K E + ++ ++ L+T ++ FG+ Sbjct: 408 -------------KAVNPTNIMGATKRIAELYIKTFPDD---LKTKFIIVRFGN 445 >gi|282899925|ref|ZP_06307886.1| UDP-glucose 4-epimerase [Cylindrospermopsis raciborskii CS-505] gi|281195195|gb|EFA70131.1| UDP-glucose 4-epimerase [Cylindrospermopsis raciborskii CS-505] Length = 335 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 12/152 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G+ + Q L VE+I+ DI LL S F + +V+++ +AY Sbjct: 38 LDNLVYGHRDLVEQVLQ------VELIQGDIQDIPLLN-----SIFQRYKVEVVMHFSAY 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTN 119 V ++ +P + N ++ +A GI ++ ST + P+ E P + Sbjct: 87 AYVGESVTDPAKYYRNNVVATLSLLEAMLGAGIYKFVFSSTCATYGVPQFIPLTEEHPQH 146 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P+N YG +KL E ++ + Y + ++ Y Sbjct: 147 PINPYGATKLMVERILSDFDIAYGLKYVSFRY 178 >gi|221486169|gb|EEE24439.1| GDP-mannose 4,6 dehydratase, putative [Toxoplasma gondii GT1] Length = 368 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + S P I N AA + V + + PE + G + +A S G+ Sbjct: 62 DLLDSSCLCNIIASVRPHEIYNLAAQSHVKVSFEMPEYTSKVTGLGTLRLLEAVRSAGLT 121 Query: 95 C---IY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY ST +F + +P E +P P + YG +KL V +Y +Y Sbjct: 122 KETRIYQASTSELFGRVQESPQSETTPFYPRSPYGIAKLYAYWTVVNYRESY 173 >gi|110681320|ref|YP_684327.1| UDP-glucose 4-epimerase [Roseobacter denitrificans OCh 114] gi|109457436|gb|ABG33641.1| UDP-glucose 4-epimerase [Roseobacter denitrificans OCh 114] Length = 337 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ A AV + + +P + F N G + A + G I+ S+ V+ Sbjct: 75 DAVVHFAGRKAVGEGQSKPLLYFDQNVGGTVQLLHAMNRTGCKKLIFSSSAVVYGNPEYL 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PIDE P + N+YG +K E+ Sbjct: 135 PIDEEHPLSTCNVYGDTKRTVED 157 >gi|126433700|ref|YP_001069391.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. JLS] gi|126233500|gb|ABN96900.1| dTDP-glucose 4,6-dehydratase [Mycobacterium sp. JLS] Length = 335 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L + D +++ AA T VD A +P N G + +A G+ ++STD V+ Sbjct: 71 LDPATDAVVHFAAETHVDNALADPGPFVQTNVVGTYTVLEAVRRAGVRLHHVSTDEVYGD 130 Query: 107 LSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 L+ F +P NP + Y +K A + V ++ +Y + T Sbjct: 131 LALDDPRRFTESTPYNPSSPYSSTKAAADLLVRAWVRSYGVRAT 174 >gi|46241638|gb|AAS83023.1| putative GDP-fucose synthetase [Azospirillum brasilense] Length = 353 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 8/149 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G ++ ++ EI+ VGR +DL + + ++ PDV+ AA Sbjct: 40 RVWVAGHRGMAGSAVVRRLEREPCEILTVGRETVDLRRQAEVEAWMAEARPDVVFLTAAL 99 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFS-- 116 A + P N I AA +G+ +++ + ++ ++ PI E S Sbjct: 100 VGGIHANNTRPAEFLYENLAIETNIIHAAKQVGVQKLVFLGSSCIYPRMAPQPIPEESLL 159 Query: 117 --PTNPLN-IYGKSKLAGEEKVASYTNNY 142 P P N Y +K+AG + +Y Y Sbjct: 160 TGPLEPTNEWYAIAKIAGIKMCQAYRRQY 188 >gi|115523467|ref|YP_780378.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisA53] gi|115517414|gb|ABJ05398.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisA53] Length = 337 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ + P+ E +PT PL+ YG SKL E + ++ NYV+LR Sbjct: 113 IFSSTAAVYGNPDQVPVPEQAPTRPLSPYGCSKLMSEIMLHDTAVAHGLNYVVLR 167 >gi|313633865|gb|EFS00585.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri FSL N1-067] Length = 288 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K + L D I+N AA + VD++ P I N +G + A + Sbjct: 22 DYDLVK-----NIVLEHKIDAIVNFAAESHVDRSILNPGIFIETNVQGTLNLLNVAKELN 76 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 77 VTKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 128 >gi|300770498|ref|ZP_07080377.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] gi|300762974|gb|EFK59791.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] Length = 349 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ F ++ PD +I+ AA + VD++ +P N G + AA I Sbjct: 61 DITDANHIIEIFKNYQPDGVIHLAAESHVDRSISDPTAFVMTNVIGTVNLLNAAKEIWRD 120 Query: 92 ---GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G ++STD VF L T + E + +P + Y SK + + V +Y + Y Sbjct: 121 NYEGKRFHHVSTDEVFGALGSTGLFTEDTKYDPHSPYSASKASSDHFVRAYHDTY 175 >gi|330994234|ref|ZP_08318162.1| dTDP-glucose 4-6-dehydratase 2 [Gluconacetobacter sp. SXCC-1] gi|329758701|gb|EGG75217.1| dTDP-glucose 4-6-dehydratase 2 [Gluconacetobacter sp. SXCC-1] Length = 342 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCI------- 96 F F PD +++ AA + VD++ D P S N G + +AA G+ Sbjct: 53 FAEFQPDAVMHLAAESHVDRSIDGPGTFVSTNIVGTYTLLEAARRWWSGLDAARRGAFRF 112 Query: 97 -YISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L P E + +P + Y SK + + V ++ + Y Sbjct: 113 HHISTDEVFGALRPGDPPFTEQTAYDPRSPYSASKASSDHLVRAWYHTY 161 >gi|292488710|ref|YP_003531597.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] gi|291554144|emb|CBA21331.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora CFBP1430] Length = 383 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IG 92 D+ + F F PDV+++ AA + VD++ D P N G + +AA +G Sbjct: 83 DICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLG 142 Query: 93 IPC--------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E + P + Y SK + + V ++ Y Sbjct: 143 LPVERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTY 202 >gi|226310143|ref|YP_002770037.1| hypothetical protein BBR47_05560 [Brevibacillus brevis NBRC 100599] gi|226093091|dbj|BAH41533.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC 100599] Length = 734 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 5/111 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F S DV+I+ AA +V + ++P + + N G + K + G+ I+ S+ V+ Sbjct: 61 FKSNKFDVVIHLAAQVSVAASMEDPLLDTNTNILGLVNMLKLSSKYGVSKFIFASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 TP+ E S +P+++YG +K GE +T Y V R A VY Sbjct: 121 GMNECTPLLEDSGCDPVSVYGINKHIGEMYCRKWTEMYGLQTVAFRLANVY 171 >gi|212703423|ref|ZP_03311551.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] gi|212673168|gb|EEB33651.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] Length = 244 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F F D +++ AA + V ++ P F+ N G ++ +A G+ ++ S+ V Sbjct: 61 IFRRFRIDGVMHFAADSQVGESMVNPLKYFNNNVGGMQSLLEAMVRHGVGRIVFSSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 + PI E +PT P N YG SKL E + A++ YV LR V Sbjct: 121 YGEPDSVPISEDAPTRPTNPYGHSKLMMEAMMRWVSAAHGIRYVSLRYFNVAGALADGSI 180 Query: 156 -------SNFLLSMLRLA-KERREISVVCDQFGTP 182 S+ + +L++ +R I++ D + TP Sbjct: 181 GEDHSPESHLIPLVLQVPLGQRPHITIFGDDYATP 215 >gi|251795043|ref|YP_003009774.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] gi|247542669|gb|ACS99687.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] Length = 331 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 32/214 (14%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDFA-SF 45 M LV G G I + +++++ + EI+ V G+ + L+ +F + Sbjct: 4 MAVLVTGGAGYIGSHAVAALAERGEEIVVVDNLQQGHREAVVGGKLYVGDLRDAEFMDTV 63 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-GAIAKAADSIGIPCIYISTDYVF 104 F D +I+ AA + V ++ P + N G + K + ++ ST + Sbjct: 64 FKENKIDAVIHFAANSLVGESMTNPAKYYHNNVYGTLCLLEKMIEHDVKKIVFSSTAATY 123 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR-----TAWVYSIFG 155 PIDEF T P N YG++KLA E+ + ++ YV LR A G Sbjct: 124 GEPENVPIDEFDRTLPTNTYGETKLAMEKMMKWFDVAHGLKYVSLRYFNAAGAHASGKIG 183 Query: 156 SN-----FLLSMLRLAK--ERREISVVCDQFGTP 182 + L+ ++ A +R ISV D + TP Sbjct: 184 EDHSPETHLIPIVLQAALGQRPHISVFGDDYATP 217 >gi|23500581|ref|NP_700021.1| epimerase/dehydratase family protein [Brucella suis 1330] gi|62317317|ref|YP_223170.1| epimerase/dehydratase family protein [Brucella abortus bv. 1 str. 9-941] gi|83269298|ref|YP_418589.1| epimerase/dehydratase family protein [Brucella melitensis biovar Abortus 2308] gi|237816874|ref|ZP_04595866.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A] gi|254695872|ref|ZP_05157700.1| epimerase/dehydratase family protein, putative [Brucella abortus bv. 3 str. Tulya] gi|254698601|ref|ZP_05160429.1| epimerase/dehydratase family protein, putative [Brucella abortus bv. 2 str. 86/8/59] gi|254700059|ref|ZP_05161887.1| epimerase/dehydratase family protein, putative [Brucella suis bv. 5 str. 513] gi|254705674|ref|ZP_05167502.1| epimerase/dehydratase family protein, putative [Brucella pinnipedialis M163/99/10] gi|254710905|ref|ZP_05172716.1| epimerase/dehydratase family protein, putative [Brucella pinnipedialis B2/94] gi|256015615|ref|YP_003105624.1| epimerase/dehydratase family protein, putative [Brucella microti CCM 4915] gi|256029288|ref|ZP_05442902.1| epimerase/dehydratase family protein, putative [Brucella pinnipedialis M292/94/1] gi|256058974|ref|ZP_05449188.1| epimerase/dehydratase family protein, putative [Brucella neotomae 5K33] gi|256157484|ref|ZP_05455402.1| epimerase/dehydratase family protein, putative [Brucella ceti M490/95/1] gi|256253538|ref|ZP_05459074.1| epimerase/dehydratase family protein, putative [Brucella ceti B1/94] gi|260763066|ref|ZP_05875398.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|261216295|ref|ZP_05930576.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str. Tulya] gi|261220669|ref|ZP_05934950.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94] gi|261313093|ref|ZP_05952290.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M163/99/10] gi|261318487|ref|ZP_05957684.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94] gi|261322920|ref|ZP_05962117.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33] gi|261750545|ref|ZP_05994254.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|265986284|ref|ZP_06098841.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M292/94/1] gi|265995980|ref|ZP_06108537.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1] gi|294853805|ref|ZP_06794477.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026] gi|23464219|gb|AAN34026.1| epimerase/dehydratase family protein, putative [Brucella suis 1330] gi|62197510|gb|AAX75809.1| hypothetical epimerase/dehydratase family protein [Brucella abortus bv. 1 str. 9-941] gi|82939572|emb|CAJ12550.1| epimerase/dehydratase family protein, putative [Brucella melitensis biovar Abortus 2308] gi|237787687|gb|EEP61903.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A] gi|255998275|gb|ACU49962.1| epimerase/dehydratase family protein, putative [Brucella microti CCM 4915] gi|260673487|gb|EEX60308.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str. 86/8/59] gi|260917902|gb|EEX84763.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str. Tulya] gi|260919253|gb|EEX85906.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94] gi|261297710|gb|EEY01207.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94] gi|261298900|gb|EEY02397.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33] gi|261302119|gb|EEY05616.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M163/99/10] gi|261740298|gb|EEY28224.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513] gi|262550277|gb|EEZ06438.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1] gi|264658481|gb|EEZ28742.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis M292/94/1] gi|294819460|gb|EFG36460.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026] Length = 336 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|91976050|ref|YP_568709.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB5] gi|91682506|gb|ABE38808.1| dTDP-glucose 4,6-dehydratase [Rhodopseudomonas palustris BisB5] Length = 353 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 +D+ + F FSPD++++ AA + VD++ D P N G + +AA Sbjct: 59 VDITDVEAMRRVFAEFSPDIVMHLAAESHVDRSIDGPGEFIQTNLVGTFVLLQAALNHWR 118 Query: 89 -----DSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G ++STD VF L + +E + P + Y SK + V ++ + Y Sbjct: 119 TLPAGRKPGFRFHHVSTDEVFGSLGPSGSFNEETAYRPNSPYSASKAGSDHLVRAWHHTY 178 >gi|312127797|ref|YP_003992671.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] gi|311777816|gb|ADQ07302.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] Length = 305 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 5/102 (4%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ + + SIN G + + I S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMKDAYLDCSINVLGTVNLLDYCVKYKVKKFILASSAAVYGEPKYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 E P P + YG SKL EE + + +N Y+I R + VY Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRYSNVY 170 >gi|300865147|ref|ZP_07109971.1| hypothetical protein OSCI_1490007 [Oscillatoria sp. PCC 6506] gi|300336837|emb|CBN55121.1| hypothetical protein OSCI_1490007 [Oscillatoria sp. PCC 6506] Length = 293 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 25/165 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFAS---FFLSFSP--------- 51 L++G + + ++L++ +I G+P I+ + D S F+ + Sbjct: 8 LIVGADSSMGRALAA------RLISAGKPVIETTRRHDTLSETRIFIDLTKEIANWHPPA 61 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-- 107 DV AA T++++ +P + +N ++AK + G +++ST+ V+DG Sbjct: 62 KIDVAYLCAAVTSLEQCRQDPVHSAEVNVRNTLSLAKDLIARGTFVVFLSTNQVYDGSIP 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 R D+ P YG+ K E+++ + N I+R V S Sbjct: 122 LRKADDKVCPQTE---YGRQKAEAEKQLLALGNLVSIVRFTKVLS 163 >gi|260911360|ref|ZP_05917957.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634520|gb|EEX52613.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 289 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 8/102 (7%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD+I+N + A+ +P A INA + AD G I+ISTD VF G Sbjct: 61 KPDIILNCIG-ILIAGAKKDPANAIYINACLPHRLKALADETGAKLIHISTDCVFSGKKG 119 Query: 110 TPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 D+F + + YG+SK GE ++++ LRT+ V Sbjct: 120 NYTEDDFKDAD--DTYGRSKALGE----IVDDHHLTLRTSIV 155 >gi|213022892|ref|ZP_03337339.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 80 Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%) Query: 221 SWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 +W D+A +F E+ + G +++ + T YPT A RP S L+ K + + Sbjct: 3 TWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQ 62 Query: 279 WKEGVRNILVNI 290 W+ GV+ +L + Sbjct: 63 WELGVKRMLTEM 74 >gi|163796223|ref|ZP_02190184.1| CDP-glucose 4,6-dehydratase [alpha proteobacterium BAL199] gi|159178365|gb|EDP62907.1| CDP-glucose 4,6-dehydratase [alpha proteobacterium BAL199] Length = 363 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 3/112 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPC-IYISTDYVF-DGL 107 P++I++ AA V A P F IN G + +A + + C + +TD V+ D Sbjct: 89 PEIILHLAAQALVGHAHQHPMETFDINTTGTLNVLEAIRQTPSVRCAVLATTDKVYRDTG 148 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 R E +P YG SK A E V++Y ++ R + ++ N + Sbjct: 149 DRQTFAEDAPLGGSEAYGASKAAAELIVSAYREAFLKPRGVAIATVRAGNVV 200 >gi|50551569|ref|XP_503259.1| YALI0D25080p [Yarrowia lipolytica] gi|15028595|gb|AAK77226.1| putative dTDP-glucose 4,6-dehydratase [Yarrowia lipolytica] gi|49649127|emb|CAG81463.1| YALI0D25080p [Yarrowia lipolytica] Length = 327 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 25/159 (15%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI-------AK 86 +D+ ++ F ++ +I+ AA + V+ + +P + N G + A+ Sbjct: 52 VDICDAQELRRVFDTYDIATVIHAAAESHVECSYSDPIQVTTANVLGTQTLLEEMTRNAR 111 Query: 87 AADS----IGIP-CIYISTDYVFDG---LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 D+ +P IYISTD ++ L+ T E SP P N Y SK A E +++Y Sbjct: 112 ETDTEIREQNLPKLIYISTDEIYGDQADLTGTEDLETSPLCPSNPYAASKAAAEMFISAY 171 Query: 139 TNNY----VILRTAWVYSIFG------SNFLLSMLRLAK 167 T +Y V LR VY + F L+ML+ K Sbjct: 172 TKSYGLECVTLRFNNVYGEYQYPEKIIPAFCLAMLKGDK 210 >gi|292899866|ref|YP_003539235.1| dTDP-D-glucose-4,6-dehydratase [Erwinia amylovora ATCC 49946] gi|291199714|emb|CBJ46834.1| dTDP-D-glucose-4,6-dehydratase [Erwinia amylovora ATCC 49946] Length = 358 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IG 92 D+ + F F PDV+++ AA + VD++ D P N G + +AA +G Sbjct: 58 DICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLG 117 Query: 93 IPC--------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E + P + Y SK + + V ++ Y Sbjct: 118 LPVERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTY 177 >gi|302865263|ref|YP_003833900.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] gi|302568122|gb|ADL44324.1| UDP-glucose 4-epimerase [Micromonospora aurantiaca ATCC 27029] Length = 328 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 19/147 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDLLK-PKDFASFFLS 48 MK LV G G I ++ M + ++ +R G PD ++ P A+ L+ Sbjct: 1 MKLLVTGGAGYIGSVVTRMLLDHGHQVTVLDDLRTGHREALAPDATHVELPVHEAARVLT 60 Query: 49 FSPDV----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 PD +++ AA A ++ PE+ + N G+ A+ A + +P ++ ST V Sbjct: 61 --PDAGFDGVLHFAALIAAGESMIRPELYWHTNTVGSIALIDAVRAARVPRMVFSSTAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLA 130 + + PI E + P + YG +KLA Sbjct: 119 YGNPTELPIPETAVKAPTSTYGATKLA 145 >gi|302382271|ref|YP_003818094.1| dTDP-glucose 4,6-dehydratase [Brevundimonas subvibrioides ATCC 15264] gi|302192899|gb|ADL00471.1| dTDP-glucose 4,6-dehydratase [Brevundimonas subvibrioides ATCC 15264] Length = 352 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--G 92 D+ P A F PDV+ + AA + VD++ D P N G + G Sbjct: 58 DICDPDAVAKALKDFRPDVVAHLAAESHVDRSIDGPGAFVQTNLVGTFVMLNQTLGYWRG 117 Query: 93 IPCI--------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P + +ISTD VF L E +P +P + Y SK + V ++ + Y Sbjct: 118 LPDVEKAAFRFHHISTDEVFGSLGEDGFFTETTPYDPRSPYSASKAGSDHLVRAWGHTY 176 >gi|254295354|ref|YP_003061377.1| polysaccharide biosynthesis protein CapD [Hirschia baltica ATCC 49814] gi|254043885|gb|ACT60680.1| polysaccharide biosynthesis protein CapD [Hirschia baltica ATCC 49814] Length = 670 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 26/209 (12%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 PD++++ AA V E P A N EGA A A G+ ++ISTD Sbjct: 372 PDIVLHAAALKHVPLMETNPNEAILTNVEGARLAATYAAEFGVKNFVFISTD-------- 423 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASY-----TNNYVILRTAWVYSIFGSNFLLSMLR 164 P N+ G SK A E + + T N+ I+R V GS L R Sbjct: 424 ------KAVQPSNVMGASKRAAELFIQALAPQAATTNFAIVRFGNVLGSAGSVAPL-FER 476 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD-GGPVSWA 223 KE +++ + +++ A +++ A L +S + + F D G PVS Sbjct: 477 QIKEGGPVTITDAEMTRYFMSVEEASSLVLQASAL--SSKSPHKEAFLYVLDMGPPVSIV 534 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYP 252 + AE + R P + +FT P Sbjct: 535 ELAERMIRLKGYR--PGKDIEIVFTGLRP 561 >gi|229495175|ref|ZP_04388911.1| NAD dependent epimerase/reductase-related protein [Porphyromonas endodontalis ATCC 35406] gi|229317915|gb|EEN83812.1| NAD dependent epimerase/reductase-related protein [Porphyromonas endodontalis ATCC 35406] Length = 341 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 12/136 (8%) Query: 40 KDFASFFLSFSPDV----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIP 94 + FA LS S + +I+ A T ++ E+ NAE + +A + + +P Sbjct: 68 QQFAKIPLSLSTEAPFRYVIHNAGLTKTPHKKEFQEV----NAEHTRRLLEALERMPALP 123 Query: 95 CIYI---STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ S S P+D P P +YGKSKL E V Y IL VY Sbjct: 124 ERFVLMSSMGSYGKNRSHHPLDASMPHEPNTLYGKSKLLAEHYVRQSDFRYTILNPTGVY 183 Query: 152 SIFGSNFLLSMLRLAK 167 ++ LS+ + K Sbjct: 184 GFGDQDYWLSIDTMKK 199 >gi|260062604|ref|YP_003195684.1| putative capsular polysaccharide biosynthesis protein [Robiginitalea biformata HTCC2501] gi|88784171|gb|EAR15341.1| putative capsular polysaccharide biosynthesis protein [Robiginitalea biformata HTCC2501] Length = 663 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 15/90 (16%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 S F + PD++ + AAY V E P A IN G IA A ++ISTD Sbjct: 361 SIFQEYKPDIVFHAAAYKHVPLMEYNPYEAIKINIAGTKVIADLAQQHNTDKFVFISTD- 419 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP N+ G SK E Sbjct: 420 -------------KAVNPTNVMGASKRIAE 436 >gi|307130154|ref|YP_003882170.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] gi|306527683|gb|ADM97613.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii 3937] Length = 354 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCI------- 96 F +F PD +++ AA + VD++ D P N G + +AA +P Sbjct: 69 FATFQPDAVMHLAAESHVDRSIDGPSAFIETNITGTYTLLEAARQYWSALPEASRAAFRF 128 Query: 97 -YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD V+ L T E +P P + Y SK A + V ++ Y Sbjct: 129 HHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAASDHLVRAWLRTY 177 >gi|152971030|ref|YP_001336139.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955879|gb|ABR77909.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 354 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 19/154 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M CL N +SL+ + + R D+ A+ F F PD++++ AA Sbjct: 31 MDCLTYAGN---LESLAPVAGSE----RYSFSQTDITDAAAVAAQFSEFRPDIVMHLAAE 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCI--------YISTDYVFDGLSRT 110 + VD++ D P N G + +AA G+ + +ISTD V+ L T Sbjct: 84 SHVDRSIDGPAAFIQTNVIGTFTMLEAARHYWSGLGDVQKQAFRFHHISTDEVYGDLHGT 143 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V ++ Y Sbjct: 144 DDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTY 177 >gi|85709754|ref|ZP_01040819.1| hypothetical protein NAP1_12753 [Erythrobacter sp. NAP1] gi|85688464|gb|EAQ28468.1| hypothetical protein NAP1_12753 [Erythrobacter sp. NAP1] Length = 337 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDY 102 S + PD II+ AA V + + P N GA + + A +G+ + + ST Sbjct: 71 SLAMDAKPDAIIHLAAQAGVRYSLENPRAYVDANLVGAFNVMECARELGVDHLMMASTSS 130 Query: 103 VFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 V+ P E T+ PL +Y +K A E SY + + + T + ++++G Sbjct: 131 VYGANEDMPFAEREKTDHPLTLYAATKKANEAMAHSYAHLWNLPTTMFRFFTVYG 185 >gi|282862478|ref|ZP_06271540.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] gi|282562817|gb|EFB68357.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. ACTE] Length = 327 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 24/157 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + +L+ D E++ GR ++DL F PD ++ AA Sbjct: 22 RVFVAGHRGLVGSALARRLTADGHEVVTRGRDELDLRDVAATGRFLRDVRPDAVVLAAAK 81 Query: 61 TA---------VDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 V ED I S+ A A + G P +++ + ++ + Sbjct: 82 VGGIMANSTWPVQFLEDNLRIQLSVIA--------GAHAAGTPRLLFLGSSCIYPRRAPQ 133 Query: 111 PIDEFS----PTNPLN-IYGKSKLAGEEKVASYTNNY 142 PI E S P P N Y +K+AG + SY Y Sbjct: 134 PIREDSLLTGPLEPTNEAYALAKIAGIVQTQSYRRQY 170 >gi|282164200|ref|YP_003356585.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282156514|dbj|BAI61602.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 312 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 22/171 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII---RVGRPD-IDLLKPKDFASFFLS----- 48 MKC+V G G I L+ + DV +I GR + I+ P D +F Sbjct: 1 MKCVVTGGAGFIGSHLTDRLLAMGHDVTVIDNLSGGRLEFIEGHFPDDRFNFIKKDISGD 60 Query: 49 ------FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTD 101 D++ + AA V + ++ N + ++ +G+ I + ST Sbjct: 61 GAIKELKGADIVYHLAANPDVKLGAENTKVHLKQNIIVTYNVLESMRELGVKNIAFTSTS 120 Query: 102 YVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 V+ S P E + P P+++YG SKL+ E ++SY + + + +W+Y Sbjct: 121 TVYGEASVVPTPENYGPLMPISLYGASKLSCEALISSYCHTFGM--ASWLY 169 >gi|218510293|ref|ZP_03508171.1| UDP-glucose 4-epimerase protein [Rhizobium etli Brasil 5] Length = 344 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ AA GI Sbjct: 51 DIADPDILKKIFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSAAIKAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G + P+ E + NP N YG+SKL E + A+Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQQNDLPVKENASLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 168 >gi|154174592|ref|YP_001407696.1| UDP-glucose 4-epimerase [Campylobacter curvus 525.92] gi|112803572|gb|EAU00916.1| UDP-glucose 4-epimerase [Campylobacter curvus 525.92] Length = 328 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + F D II+ AA+ V ++ EP + N I G+ ++ S Sbjct: 61 DLSEIFARGKFDAIIHFAAFIEVFESTQEPLKYYLNNTANVAKILTYCQKFGVNKFVFSS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 T V+ + E S NP+N YG+SKL E+ + Y Sbjct: 121 TAAVYGEPDVPEVTEQSAANPINPYGRSKLMSEQIIKDY 159 >gi|312172861|emb|CBX81117.1| dTDP-glucose 4,6-dehydratase [Erwinia amylovora ATCC BAA-2158] Length = 383 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IG 92 D+ + F F PDV+++ AA + VD++ D P N G + +AA +G Sbjct: 83 DICDSESLKRAFNDFEPDVVMHLAAESHVDRSIDGPAAFIETNIIGTYVLLEAARMYWLG 142 Query: 93 IPC--------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L T E + P + Y SK + + V ++ Y Sbjct: 143 LPVERKEAFRFHHISTDEVFGDLHGTEDLFTEQTAYAPSSPYSASKASSDHLVRAWQRTY 202 >gi|291436234|ref|ZP_06575624.1| LOW QUALITY PROTEIN: polysaccharide biosynthesis protein [Streptomyces ghanaensis ATCC 14672] gi|291339129|gb|EFE66085.1| LOW QUALITY PROTEIN: polysaccharide biosynthesis protein [Streptomyces ghanaensis ATCC 14672] Length = 257 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 18/181 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL P P +IN ++ A +++ A+GA +A A G Sbjct: 22 DLRDPGRMGEVLARTRPAAVINASSGHA----------DWAVTADGAARLALEAARAGCR 71 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 +++S+D VF G +E P +P++ YG +K A E V ++RT+ + Sbjct: 72 LVHVSSDAVFSGADVHYPEEALP-DPVSPYGAAKAAAETAVRVAVPEAAVVRTSLIVGHN 130 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 S ++ LA RR + D P +A A+++IA SD S G+FH+ Sbjct: 131 RSAHEEAVHALAAGRRAGVLFTDDVRCPVHVDDLASALLEIA-----ASDGS--GVFHVA 183 Query: 215 A 215 Sbjct: 184 G 184 >gi|262381209|ref|ZP_06074347.1| dtdp-glucose 4,6-dehydratase [Bacteroides sp. 2_1_33B] gi|262296386|gb|EEY84316.1| dtdp-glucose 4,6-dehydratase [Bacteroides sp. 2_1_33B] Length = 279 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 11/148 (7%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G I+ L + + +E DLL + F D++ + AA + + Sbjct: 33 LVLGRKENISHLLEKVGFEFIEE--------DLLHTEAMREIFKDRKFDMVYHLAANSDI 84 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRTPIDEFSPTNPLN 122 K +P++ + + + + GI + ST ++ S + + P P++ Sbjct: 85 QKGGKDPQVDYDLTFNTTFHVLRYLKEFGIKKFFFASTSAIYGETSDILNENYGPLCPVS 144 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWV 150 YG KLA E +++++ Y I W+ Sbjct: 145 NYGAGKLASEAFISAFSFAYHI--QTWI 170 >gi|239927894|ref|ZP_04684847.1| polysaccharide biosynthesis protein [Streptomyces ghanaensis ATCC 14672] Length = 256 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 18/181 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL P P +IN ++ A +++ A+GA +A A G Sbjct: 21 DLRDPGRMGEVLARTRPAAVINASSGHA----------DWAVTADGAARLALEAARAGCR 70 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 +++S+D VF G +E P +P++ YG +K A E V ++RT+ + Sbjct: 71 LVHVSSDAVFSGADVHYPEEALP-DPVSPYGAAKAAAETAVRVAVPEAAVVRTSLIVGHN 129 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 S ++ LA RR + D P +A A+++IA SD S G+FH+ Sbjct: 130 RSAHEEAVHALAAGRRAGVLFTDDVRCPVHVDDLASALLEIA-----ASDGS--GVFHVA 182 Query: 215 A 215 Sbjct: 183 G 183 >gi|237834497|ref|XP_002366546.1| GDP-mannose 4,6 dehydratase, putative [Toxoplasma gondii ME49] gi|211964210|gb|EEA99405.1| GDP-mannose 4,6 dehydratase, putative [Toxoplasma gondii ME49] gi|221503666|gb|EEE29357.1| GDP-mannose 4,6 dehydratase, putative [Toxoplasma gondii VEG] Length = 368 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + S P I N AA + V + + PE + G + +A S G+ Sbjct: 62 DLLDSSCLCNIIASVRPHEIYNLAAQSHVKVSFEMPEYTSKVTGLGTLRLLEAVRSAGLT 121 Query: 95 C---IY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY ST +F + +P E +P P + YG +KL V +Y +Y Sbjct: 122 KETRIYQASTSELFGRVQESPQSETTPFYPRSPYGIAKLYAYWTVVNYRESY 173 >gi|57044184|ref|XP_544499.1| PREDICTED: similar to UDP-galactose-4-epimerase [Canis familiaris] Length = 348 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 9/148 (6%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 I G + +SL VQ++ V ++D+L F S +I+ A AV + Sbjct: 39 IRGKGSMPESLQR--VQELTGRSVEFEEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGE 96 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NI 123 + +P + +N G+ + + + G+ ++ S+ V+ P+DE PT N Sbjct: 97 SVQKPLDYYRVNLTGSIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156 Query: 124 YGKSKLAGEEKV-----ASYTNNYVILR 146 YGKSK EE + A N V+LR Sbjct: 157 YGKSKYFIEEMIRDLCQADKAWNAVLLR 184 >gi|58393741|ref|XP_320278.2| AGAP012261-PA [Anopheles gambiae str. PEST] gi|55234400|gb|EAA00282.3| AGAP012261-PA [Anopheles gambiae str. PEST] Length = 349 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 4/129 (3%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 G ++ +SL VQ++ V D+D+ + + S F D +++ AA AV ++ Sbjct: 41 GGGSKLPESLRR--VQEITGASVTFYDVDIRERDELRSVFNKHKIDCVVHFAALKAVGES 98 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPL-NIY 124 P + N G + + G+ +Y S+ V+ + P+ E PT N Y Sbjct: 99 CRIPLQYYQNNITGTSILLEVMAEAGVFKIVYSSSATVYGEPQKLPLTESHPTGSCTNPY 158 Query: 125 GKSKLAGEE 133 GKSK EE Sbjct: 159 GKSKYFTEE 167 >gi|322420254|ref|YP_004199477.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] gi|320126641|gb|ADW14201.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18] Length = 328 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--VILRTAWVYS 152 L P+D+ S + P++ YGKSKL E +V Y + + VILR + VY Sbjct: 123 LDGRPVDDGSTSRPVSDYGKSKLLAENEVCGYKDRFSVVILRPSVVYG 170 >gi|315501807|ref|YP_004080694.1| UDP-glucose 4-epimerase [Micromonospora sp. L5] gi|315408426|gb|ADU06543.1| UDP-glucose 4-epimerase [Micromonospora sp. L5] Length = 328 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 19/147 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDLLK-PKDFASFFLS 48 MK LV G G I ++ M + ++ +R G PD ++ P A+ L+ Sbjct: 1 MKLLVTGGAGYIGSVVTRMLLDHGHQVTVLDDLRTGHREALAPDATHVELPVHEAARVLT 60 Query: 49 FSPDV----IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 PD +++ AA A ++ PE+ + N G+ A+ A + +P ++ ST V Sbjct: 61 --PDAGFDGVLHFAALIAAGESMIRPELYWHTNTVGSIALIDAVRAARVPRMVFSSTAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLA 130 + + PI E + P + YG +KLA Sbjct: 119 YGNPAELPIPETAVKAPTSTYGATKLA 145 >gi|124004199|ref|ZP_01689045.1| NAD dependent epimerase/dehydratase family protein [Microscilla marina ATCC 23134] gi|123990269|gb|EAY29768.1| NAD dependent epimerase/dehydratase family protein [Microscilla marina ATCC 23134] Length = 330 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 +D P AF +N G + +A + I ++ S+ V+ P+ E P N N YG Sbjct: 93 KDFPRTAFDVNIAGTFNVLEACVNNNIKKLVWSSSASVYGDAVELPMTEAHPFNNKNFYG 152 Query: 126 KSKLAGEEKVASYTNNY 142 SK+AGE ++ + Y Sbjct: 153 ASKIAGEAMATAFNDRY 169 >gi|15827009|ref|NP_301272.1| sugar-nucleotide dehydratase [Mycobacterium leprae TN] gi|221229487|ref|YP_002502903.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae Br4923] gi|3097237|emb|CAA18814.1| putative sugar dehyratase [Mycobacterium leprae] gi|13092556|emb|CAC29712.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae] gi|219932594|emb|CAR70297.1| putative sugar-nucleotide dehydratase [Mycobacterium leprae Br4923] Length = 319 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 D + P+V+ + AA V + +P+ S+N G +A+AA G+ I ++ Sbjct: 66 DLQTILDEHRPEVVFHLAAQIDVRHSVVDPQFDASVNVIGTVRLAEAARHTGVRKIVHTS 125 Query: 101 D--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ S+ P E PT+P + Y K+AGE Sbjct: 126 SGGSIYGTPSQYPTPETVPTDPTSPYAAGKVAGE 159 >gi|307104877|gb|EFN53129.1| hypothetical protein CHLNCDRAFT_137493 [Chlorella variabilis] Length = 365 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F S D +I+ AA +V ++ +P + N G A+ +A G ++ S+ V+ Sbjct: 76 FRSRRIDAVIHFAAKKSVGESVADPLKYYDHNVGGTVALLQAMQEAGCHQLVFSSSACVY 135 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSK 128 + PIDE +P + LN YG++K Sbjct: 136 GEPEKVPIDESAPLHALNPYGRTK 159 >gi|161620908|ref|YP_001594794.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] gi|260567890|ref|ZP_05838359.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40] gi|161337719|gb|ABX64023.1| NAD-dependent epimerase/dehydratase [Brucella canis ATCC 23365] gi|260154555|gb|EEW89636.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40] Length = 336 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD V+ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|312622609|ref|YP_004024222.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] gi|312203076|gb|ADQ46403.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] Length = 305 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDSYLDCSINILGTVNLLDYCVKYKVKKFIFASSAAVYGEPKYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 E P P + YG SKL EE + + + Y+I R + VY Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYIIFRYSNVY 170 >gi|307609554|emb|CBW99054.1| dTDP-D-glucose 4,6-dehydratase [Legionella pneumophila 130b] Length = 355 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+L S + D +++ AA + VD + D P+I N G + +AA Sbjct: 77 DILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLN 136 Query: 89 ----DSIGIPCIYISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D ++STD V+ L R T + + P +P Y SK + + V +Y Sbjct: 137 ERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSP---YSASKASSDHIVRAYY 193 Query: 140 NNY 142 + Y Sbjct: 194 HTY 196 >gi|302671932|ref|YP_003831892.1| GDP-mannose 4,6-dehydratase Gmd2 [Butyrivibrio proteoclasticus B316] gi|302396405|gb|ADL35310.1| GDP-mannose 4,6-dehydratase Gmd2 [Butyrivibrio proteoclasticus B316] Length = 363 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--C-IY-ISTDYVFDG 106 PD I N AA + V + D PE ++A G + +A G+ C IY ST ++ Sbjct: 75 PDEIYNLAAQSHVQVSFDSPEFTADVDATGVLRVLEAVRQCGLADTCRIYQASTSELYGK 134 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E +P +P + Y +KL G + Y Y Sbjct: 135 VEEVPQSEKTPFHPYSPYAVAKLYGYWIIKEYREAY 170 >gi|294140261|ref|YP_003556239.1| UDP-glucose 4-epimerase [Shewanella violacea DSS12] gi|293326730|dbj|BAJ01461.1| UDP-glucose 4-epimerase, putative [Shewanella violacea DSS12] Length = 305 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 19/167 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD-------- 52 MK LV G++G I LS IIR GR + + + ++ + + Sbjct: 1 MKILVTGSSGFIGNILSQYLEHKHSIIRHGRQGV-IASADNLCRVNINNNSNWEQCLQNV 59 Query: 53 -VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF--DGLS 108 I++ AA A +K+ D P+ +N +G +A+ A +G+ ++IS+ V D + Sbjct: 60 NAIVHLAA-VAHNKSND-PDYINEVNVKGTINLAQQAVKMGVKRFVFISSIGVLGNDTNN 117 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEE---KVASYTN-NYVILRTAWVY 151 P DE S P + Y +SKL E K+A T+ +I+R VY Sbjct: 118 AKPFDEHSNVLPHSEYAQSKLDAENALLKIAEETDLEVIIIRPVLVY 164 >gi|295838316|ref|ZP_06825249.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB74] gi|197695893|gb|EDY42826.1| UDP-glucose 4-epimerase [Streptomyces sp. SPB74] Length = 323 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 15/155 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ L D +++ AA + V ++ ++P + N G A+ A GI ++ ST Sbjct: 57 AAALLPEGIDGVLHFAASSQVGESVEKPGKYWGNNVGGTRALLDAMREKGIGRLVFSSTA 116 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG----- 155 + TPI E PT P + YG +KLA + +A + + + Y ++ G Sbjct: 117 ATYGEPVHTPIVETDPTIPTSPYGNTKLAVDHMIADECRAHGLAAVSLRYFNVAGADGES 176 Query: 156 -------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 S+ + +L++A+ RR +SV + + TP Sbjct: 177 GERHDPESHLIPIVLQVAQGRRAAVSVFGEDYATP 211 >gi|51315934|sp|Q7WTB1|GALE_LACHE RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|31620907|emb|CAD55502.1| UDP-galactose 4-epimerase [Lactobacillus helveticus] Length = 330 Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPK------DFASFFL 47 MK LVIG G I V++ + V R +D PK D FL Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVLVLDALYTGHRKAVD---PKAKFYQGDIEDTFL 57 Query: 48 ------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 D +++ AAY+ V ++ +P + N G ++ +A + + + S+ Sbjct: 58 VSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVKYLVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ + PI E +P NP+N YG++K+ E+ +A Sbjct: 118 AATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMA 153 >gi|326315748|ref|YP_004233420.1| GDP-L-fucose synthase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372584|gb|ADX44853.1| GDP-L-fucose synthase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 305 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 10/129 (7%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G+ G + ++ L + + E+I GR +DLL F PD +++ A Sbjct: 1 MRILLTGSTGMVGRNFLEHPAIHEFEVIAPGRDALDLLDYAGVERFVAEHRPDAVVHAAG 60 Query: 60 YTAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI----- 112 +A + F + N + I AA + G+P + + + +F TP+ Sbjct: 61 IVGGIQANMADPVRFLLGNLDMGRNIVMAARAAGVPRLLNLGSSCMFPRGWDTPLREDMV 120 Query: 113 --DEFSPTN 119 E PTN Sbjct: 121 LTGELEPTN 129 >gi|297567322|ref|YP_003686294.1| NAD-dependent epimerase/dehydratase [Meiothermus silvanus DSM 9946] gi|296851771|gb|ADH64786.1| NAD-dependent epimerase/dehydratase [Meiothermus silvanus DSM 9946] Length = 346 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 27/157 (17%) Query: 1 MKCLVIGNNGQIA------------------QSLSSMCVQDVEI--IRVGRPDIDLLKPK 40 MK LV G+NG I L + C E +R D+ + P Sbjct: 1 MKVLVTGHNGYIGTVLVPFLQNAGHEVVGLDNHLYAGCHLYAEPAPVRELHLDVREVTPD 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIS 99 F D +I+ A + + +PE + IN +A AA G ++ S Sbjct: 61 HLLGF------DAVIHLAGISNDPIGDLKPEATYDINHLATLRLAHAAKRAGATRFLFAS 114 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + + P+DE +P NP+ YG SK+ E +A Sbjct: 115 SCSTYGAAGDAPLDETAPFNPVTAYGFSKVYSERDLA 151 >gi|86358846|ref|YP_470738.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CFN 42] gi|86282948|gb|ABC92011.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CFN 42] Length = 338 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSR 109 PD++I+ AA V + + PE N EG+ I + A + + + + ST ++ + Sbjct: 77 PDILIHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYGANAT 136 Query: 110 TPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E + PL IY +K + E SY + + I TA+ ++++G Sbjct: 137 VPFRETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYG 184 >gi|15843246|ref|NP_338283.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|253800672|ref|YP_003033673.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 1435] gi|254233132|ref|ZP_04926458.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis C] gi|254366186|ref|ZP_04982230.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis str. Haarlem] gi|13883602|gb|AAK48097.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|124602925|gb|EAY61200.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis C] gi|134151698|gb|EBA43743.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis str. Haarlem] gi|253322176|gb|ACT26779.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 1435] Length = 322 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY--I 98 D + P+V+ + AA V ++ +P+ ++N G +A+AA G+ I Sbjct: 69 DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 128 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S ++ P E +PT+P + Y K+AGE + ++ + Y Sbjct: 129 SGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLY 172 >gi|327313548|ref|YP_004328985.1| GDP-mannose 4,6-dehydratase [Prevotella denticola F0289] gi|326945111|gb|AEA20996.1| GDP-mannose 4,6-dehydratase [Prevotella denticola F0289] Length = 380 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDG 106 PD I N AA + V + D PE ++A G I +A +G+ IY ST ++ Sbjct: 92 PDEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRILEAVRQLGMTATCRIYQASTSELYGK 151 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P +E +P +P + Y +K G V Y Y Sbjct: 152 VEEVPQNENTPFHPYSPYAVAKQYGFWIVREYREAY 187 >gi|310796580|gb|EFQ32041.1| UDP-glucose 4-epimerase [Glomerella graminicola M1.001] Length = 372 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 9/131 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----DVIINPAAYTAVDKAEDEPEI 72 S + V +E++ RP + D A F D +I+ AA AV ++ + P Sbjct: 40 SKVAVDRIELLSGKRPHFYQVDITDKAGLDAVFKKHPEIDSVIHFAALKAVGESGEIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G A+ +A +P I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYRVNVGGTVALLQAMTDNNVPNIVFSSSATVYGDATRFENMIPIPEHCPIGPTNTYGHT 159 Query: 128 KLAGEEKVASY 138 K E+ + + Sbjct: 160 KAFVEQIITDH 170 >gi|288802206|ref|ZP_06407646.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica D18] gi|288335173|gb|EFC73608.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica D18] Length = 384 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPC 95 F + D ++N AA + VD++ ++P++ S+N G + AA D G P Sbjct: 72 KLFAEYDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGKDEQGYPT 131 Query: 96 I-------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P P + Y SK + + V +Y + Y Sbjct: 132 WKEGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVMAYHDTY 186 >gi|187935154|ref|YP_001886519.1| NAD dependent epimerase/dehydratase family [Clostridium botulinum B str. Eklund 17B] gi|187723307|gb|ACD24528.1| NAD dependent epimerase/dehydratase family [Clostridium botulinum B str. Eklund 17B] Length = 292 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 14/161 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII-----N 56 K LV G+NG I ++L +D + + R ++DLLK ++ + D+II N Sbjct: 3 KILVTGSNGFIGKNLVEGLSKDYRVFALKRDELDLLKKEEVHKYLNKNKFDIIIHSANQN 62 Query: 57 PAAYTAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 T V + E + + N E G Y +YV + +F Sbjct: 63 STRNTLVSEYEILDRNLKMFFNLESCKNYYGKMYYFGSGAEYDINNYV-PMMQEEYFGKF 121 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 P++P YG SK K+A NN LR ++ IFG Sbjct: 122 IPSDP---YGFSKYI-MSKIAEQDNNIYDLR---LFGIFGK 155 >gi|146304598|ref|YP_001191914.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] gi|145702848|gb|ABP95990.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] Length = 325 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 18/158 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-----------------PDIDLLKPKDFAS 44 K LV G G I + M +++ V ++D+ P+ Sbjct: 4 KVLVTGGYGFIGSNFVRMIANQADVVVVDNFSVGSNRANLRDVPVKTVELDIRDPR-MLD 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 PD I N AA + VD++ +P S N G + + A + I I TD + Sbjct: 63 LIRDERPDFIFNFAAESHVDRSIVDPLSFVSTNVLGTANLLEGARRYDVTFIQIGTDEEY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E P NP + Y SK +Y Y Sbjct: 123 GEIYSGSFRETDPLNPSSPYSASKAGATLLAMAYARTY 160 >gi|325854399|ref|ZP_08171598.1| GDP-mannose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] gi|325484193|gb|EGC87127.1| GDP-mannose 4,6-dehydratase [Prevotella denticola CRIS 18C-A] Length = 380 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDG 106 PD I N AA + V + D PE ++A G I +A +G+ IY ST ++ Sbjct: 92 PDEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRILEAVRQLGMAATCRIYQASTSELYGK 151 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P +E +P +P + Y +K G V Y Y Sbjct: 152 VEEVPQNENTPFHPYSPYAVAKQYGFWIVREYREAY 187 >gi|148360588|ref|YP_001251795.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila str. Corby] gi|148282361|gb|ABQ56449.1| dTDP-glucose 4,6-dehydratase RmlB [Legionella pneumophila str. Corby] Length = 355 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+L S + D +++ AA + VD + D P+I N G + +AA Sbjct: 77 DILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLN 136 Query: 89 ----DSIGIPCIYISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D ++STD V+ L R T + + P +P Y SK + + V +Y Sbjct: 137 ERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSP---YSASKASSDHIVRAYY 193 Query: 140 NNY 142 + Y Sbjct: 194 HTY 196 >gi|114326766|ref|YP_743923.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] gi|114314940|gb|ABI61000.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] Length = 349 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ A F + PD +++ AA + VD++ D P N G + +AA Sbjct: 58 DICDATAIAQVFATHRPDAVMHLAAESHVDRSIDGPAQFVQTNVVGTLVMLEAAREHWSA 117 Query: 92 -----GIPCIYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD VF L P E + +P + Y SK + V ++ + Y Sbjct: 118 HRPEGGGRFHHISTDEVFGALENGDPPFTETTSYDPRSPYSASKAGSDHLVRAWHHTY 175 >gi|11499598|ref|NP_070840.1| UDP-glucose 4-epimerase (galE-2) [Archaeoglobus fulgidus DSM 4304] gi|2648515|gb|AAB89234.1| UDP-glucose 4-epimerase (galE-2) [Archaeoglobus fulgidus DSM 4304] Length = 307 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 D A F + +I+ AA +V KAE AF N EGA I +A + + ++ Sbjct: 46 DIAEVFRKHEIEGVIHAAAELSV-KAEKSHVDAFRANVEGALNILEACRVFDVEKVVFTS 104 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + G P EFS +P YG +K E Y+ Y I Sbjct: 105 SHSVYGPRSYPFTEFSYRDPTTFYGATKACSEILGTYYSYTYGI 148 >gi|119026513|ref|YP_910358.1| rhamnose biosynthesis dTDP-glucose 4,6-dehydratase [Bifidobacterium adolescentis ATCC 15703] gi|118766097|dbj|BAF40276.1| DTDP-glucose 4,6-dehydratase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 340 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D + +PE N EG + +AA + +ISTD V+ L+ Sbjct: 81 DAIVHFAAESHNDNSIFDPEPFIRTNVEGTMRLLEAACKYDVRFHHISTDEVYGDLALDD 140 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 F SP P + Y SK A + V ++T Y + T Sbjct: 141 PARFGENSPYRPSSPYSASKAASDHLVRAWTRTYGLRAT 179 >gi|327192360|gb|EGE59323.1| UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512] Length = 344 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + II+ A V + +P + N+ A+ AA GI Sbjct: 51 DIADPDILKKIFIENDIEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSAAIKAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G + P+ E + NP N YG+SKL E + A+Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQQNDLPVKENASLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 168 >gi|209552254|ref|YP_002284169.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539366|gb|ACI59298.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 323 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AE EP +AF + AEG + + A G+ + ++ GL+ + Sbjct: 75 DIVFHQAAIRITQCAE-EPRLAFDVLAEGTFNVLETAVKAGVSKVVAASSASVLGLAESF 133 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 +E P N IYG +K+ E + S+ YV LR VY Sbjct: 134 PTTEEHHPYNNRTIYGAAKVFNEGLMRSFAEMYGLRYVALRYFNVY 179 >gi|144900978|emb|CAM77842.1| Flagellin modification protein FlmA [Magnetospirillum gryphiswaldense MSR-1] Length = 345 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRT 110 DV+I+ AA V AE P N GA + +AA D+ + +STD Sbjct: 94 DVVIHAAAQKHVPLAEYNPTECLHTNVWGAENVVRAALDNNVQAVVALSTD--------- 144 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP+N+YG SKLA EKV NN Sbjct: 145 -----KAVNPVNLYGASKLAA-EKVFVAANN 169 >gi|86136824|ref|ZP_01055402.1| UDP-glucose 4-epimerase [Roseobacter sp. MED193] gi|85826148|gb|EAQ46345.1| UDP-glucose 4-epimerase [Roseobacter sp. MED193] Length = 333 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F P +++ AA + V +A EP ++ N G+ + +AA + G + Sbjct: 57 DLQDRARLDDVFAKHKPVAVMHFAALSQVGEAMSEPGRYWANNTGGSLNLIEAAVAAGCL 116 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 ++ ST + +DE +P PLN YG SK A E+ + + Sbjct: 117 DFVFSSTCATYGEHDNVVLDESTPQLPLNAYGASKRAVEDILKDF 161 >gi|307352237|ref|YP_003893288.1| NAD-dependent epimerase/dehydratase [Methanoplanus petrolearius DSM 11571] gi|307155470|gb|ADN34850.1| NAD-dependent epimerase/dehydratase [Methanoplanus petrolearius DSM 11571] Length = 314 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 5/58 (8%) Query: 96 IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST V+ G+ TP + +SP P++IYG SKLA E +A Y + Y + +WV+ Sbjct: 115 VFTSTSTVYGEAGVIPTP-ENYSPMIPISIYGASKLACEAMIAGYAHTYGM--KSWVF 169 >gi|227538947|ref|ZP_03968996.1| nucleoside-diphosphate sugar epimerase [Sphingobacterium spiritivorum ATCC 33300] gi|227241150|gb|EEI91165.1| nucleoside-diphosphate sugar epimerase [Sphingobacterium spiritivorum ATCC 33300] Length = 647 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 18/112 (16%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK-AADSIGIPCIYISTDYVF 104 F F PD++ + AAY V E P A N G +A A + +STD Sbjct: 367 FAQFHPDLVFHAAAYKHVPLMEQNPYEAILTNVIGTRNVADMAVKYKAKKFVMVSTD--- 423 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K A E V S L+TA++ + FG+ Sbjct: 424 -----------KAINPTNVMGATKRAAEIYVNSCQQQ---LQTAFIVTRFGN 461 >gi|222529140|ref|YP_002573022.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] gi|222455987|gb|ACM60249.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] Length = 305 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID 113 I+ AA +V K+ ++ + SIN G + + I+ S+ V+ PID Sbjct: 69 IHQAAQVSVAKSMEDSYLDCSINILGTVNLLDYCVKYKVKKFIFASSAAVYGEPKYIPID 128 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVY 151 E P P + YG SKL EE + + + Y+I R + VY Sbjct: 129 ENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYIIFRYSNVY 170 >gi|119486660|ref|ZP_01620710.1| hypothetical protein L8106_12955 [Lyngbya sp. PCC 8106] gi|119456277|gb|EAW37409.1| hypothetical protein L8106_12955 [Lyngbya sp. PCC 8106] Length = 341 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 24/148 (16%) Query: 1 MKCLVIGNNG----QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----- 51 MK LV G +G IA+ L +DV I+ + D +PKD Sbjct: 1 MKHLVTGGSGFLGNLIARRLQERG-EDVSILDIWE---DPTRPKDIQFIQCDIRDREGVA 56 Query: 52 ------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 D++ + A + K+ ++ + +N +G+ A+ A G+ I++S+ +F Sbjct: 57 KAMKGIDIVHHNVALVPLTKSGNK---FWEVNVKGSQIAAEEAVKAGVQSFIHMSSSALF 113 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 G + PI+ +PT + IYG++KLAGE Sbjct: 114 -GDCQCPINNDTPTKAVEIYGRAKLAGE 140 >gi|78186308|ref|YP_374351.1| UDP-glucose 4-epimerase [Chlorobium luteolum DSM 273] gi|78166210|gb|ABB23308.1| UDP-galactose 4-epimerase [Chlorobium luteolum DSM 273] Length = 328 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D++ P + S D ++ AA A ++ EPE N G I A GI Sbjct: 51 DIMNPLQLRAAMAS-GFDGCVHLAALKAAGQSMLEPEAYAESNLTGTINILAEASRAGIG 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 I+ S+ V+ + PIDE P NP N YG +KL Sbjct: 110 RIIFSSSAAVYGSPAYLPIDEEHPKNPENFYGFTKL 145 >gi|119386264|ref|YP_917319.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans PD1222] gi|119376859|gb|ABL71623.1| NAD-dependent epimerase/dehydratase [Paracoccus denitrificans PD1222] Length = 302 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Query: 67 EDEP-EIA--FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLN 122 ED P E+A N E G +A+AA + G+ ++ ST V+ S P E P +P+N Sbjct: 73 EDAPMELAPFLGPNVEATGHLARAAQAEGVERIVFASTIAVYSAASPAPWREDGPVHPVN 132 Query: 123 IYGKSKLAGEE 133 Y SKL E Sbjct: 133 AYALSKLMAEH 143 >gi|303241599|ref|ZP_07328098.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] gi|302590819|gb|EFL60568.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] Length = 329 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 20/166 (12%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDF-ASF 45 M LV G G I + +++ + ++ E+I V G+ + L+ K+F + Sbjct: 1 MAVLVTGGAGYIGSHTVAELLERNEEVIIVDNLEKGHKPAVLGGKLIVGDLRDKEFIKNV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 FL + +I+ AAY V ++ +P ++ N + A G+ ++ ST + Sbjct: 61 FLQNDIEAVIHFAAYIEVGESVTDPLKYYNNNVAVTLNLLTAMKEAGVKKVVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E T P N YG++KL+ E+ + +Y +VILR Sbjct: 121 GEPENIPILETDRTFPTNPYGETKLSVEKALKWSDGAYGIKHVILR 166 >gi|315499310|ref|YP_004088114.1| UDP-glucose 4-epimerase [Asticcacaulis excentricus CB 48] gi|315417322|gb|ADU13963.1| UDP-glucose 4-epimerase [Asticcacaulis excentricus CB 48] Length = 326 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 6/150 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-DIDLLKPKDFASFFLSFSPDVIINPAAYT 61 C V+ +NG + ++ ++ E ++ G + D+ + I+ AA++ Sbjct: 19 CKVLASNGFLPVTIDNLSTGHKESVKWGPLIEADIRDAVAVQKAISDYDIKAAIHFAAFS 78 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNP 120 V ++ +P + N A A A G+ + S+ G+ +T I E P P Sbjct: 79 LVGESTKDPAKYYDNNVSAATAFASHLIEGGVKALVFSSTAAAYGVPQTRLIGEDHPKKP 138 Query: 121 LNIYGKSKLAGEEKV----ASYTNNYVILR 146 +N YG SKLA E + ++ +YV+LR Sbjct: 139 INPYGDSKLAFETALHWLSQAHDLSYVVLR 168 >gi|52841201|ref|YP_095000.1| nucleoside-diphosphate sugar epimerases [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148360382|ref|YP_001251589.1| nucleoside-diphosphate sugar epimerase [Legionella pneumophila str. Corby] gi|296106551|ref|YP_003618251.1| nucleoside-diphosphate sugar epimerase [Legionella pneumophila 2300/99 Alcoy] gi|52628312|gb|AAU27053.1| nucleoside-diphosphate sugar epimerases [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148282155|gb|ABQ56243.1| nucleoside-diphosphate sugar epimerases; capsular polysaccharide biosynthesis [Legionella pneumophila str. Corby] gi|295648452|gb|ADG24299.1| nucleoside-diphosphate sugar epimerase [Legionella pneumophila 2300/99 Alcoy] Length = 625 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 15/89 (16%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P+++ + AAY V + + +A N G +AKA+ + G I ISTD Sbjct: 362 LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTD-- 419 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP NI G +K E Sbjct: 420 ------------KAVNPTNIMGTTKRVAE 436 >gi|34497902|ref|NP_902117.1| dehydrogenase [Chromobacterium violaceum ATCC 12472] gi|34103758|gb|AAQ60119.1| probable dehydrogenase [Chromobacterium violaceum ATCC 12472] Length = 336 Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 13/163 (7%) Query: 96 IYISTDYV-FDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV--Y 151 I++ST + FD R + E F P +N Y ++K E+KV T Y LRT + Sbjct: 111 IHVSTPALYFDFRHRYNVPEAFRPRRFVNAYARTKAQAEDKVQEATRAYPALRTTILRPR 170 Query: 152 SIFGSNFLLSMLRLAK--ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 +IFG + + M RLA+ RR + + G T L ++ + D + Sbjct: 171 AIFGEHDQVLMPRLARMLSRRGGRLPLPRGGAATLDLTYVGNVVHAMWLATSHPDLASGL 230 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 F++T + PV D +F + E G P RI T YP Sbjct: 231 AFNIT-NQQPVMLRDALTRVFVQ--ELGQP----LRIVTLPYP 266 >gi|325499241|gb|EGC97100.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii ECD227] Length = 355 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD I++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARIFTEHQPDCIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNAQAEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|312889300|ref|ZP_07748854.1| NAD-dependent epimerase/dehydratase [Mucilaginibacter paludis DSM 18603] gi|311298177|gb|EFQ75292.1| NAD-dependent epimerase/dehydratase [Mucilaginibacter paludis DSM 18603] Length = 318 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 24/161 (14%) Query: 2 KCLVIGNNGQIAQSLS----------SMCVQDVEIIRVG----RP--DIDLLKPKDFASF 45 K LVIG GQI L+ S+ DV+++ RP ++++ + + Sbjct: 5 KILVIGACGQIGTELTIALKAKHGNDSVLAADVKLLNDVPFNLRPYVKLNVMDKLELRTL 64 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 L + + AA + + E +P +A+ +N +G + A S + + S+ VF Sbjct: 65 ILKEKVTTVYHLAAMLSAN-GEKQPLVAWDLNMQGLLNVLDIAKSDQLKVFWPSSIAVF- 122 Query: 106 GLSRTPIDEFSP----TNPLNIYGKSKLAGEEKVASYTNNY 142 T FSP T P +YG SK+AGE Y + Y Sbjct: 123 --GPTGPKAFSPQHAITEPSTVYGISKVAGELWCKYYFDQY 161 >gi|300114763|ref|YP_003761338.1| UDP-glucose 4-epimerase [Nitrosococcus watsonii C-113] gi|299540700|gb|ADJ29017.1| UDP-glucose 4-epimerase [Nitrosococcus watsonii C-113] Length = 340 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + S D +++ AA+T V ++ +P ++ N + + ++ G+ S+ Sbjct: 62 ALLKEHSVDTVMHFAAHTIVPESVADPLKYYANNTCHTRNLLECCETAGVKHFIFSSTAA 121 Query: 104 FDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN 157 G+ TP + E +PT P+N YG SKL E + + NYV LR +++ GS+ Sbjct: 122 TYGIPSTPLVTEDTPTIPVNPYGTSKLMSEWMLRDLSQASSLNYVALR---YFNVAGSD 177 >gi|220905862|ref|YP_002481173.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] gi|219862473|gb|ACL42812.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7425] Length = 355 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 28/134 (20%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P+D S ++F PD+I+ +A +V + P N G + A Sbjct: 60 DVRNPEDLDS--IAFQPDLILECSAEPSVLAGYNSPGYVLQTNLIGTINCLELARQTHAD 117 Query: 95 CIYISTDYV-----------------FDGLSRTPI---------DEFSPTNPLNIYGKSK 128 I++ST V F L++ P+ +EF P ++YG +K Sbjct: 118 FIFLSTSRVYPLTYLNSLNFTETETRFQLLAQQPLSGVSEEGIAEEFPLDQPRSLYGATK 177 Query: 129 LAGEEKVASYTNNY 142 LA E +A Y + Y Sbjct: 178 LASELLIAEYADAY 191 >gi|161507824|ref|YP_001577788.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260103110|ref|ZP_05753347.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|160348813|gb|ABX27487.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260083091|gb|EEW67211.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|323466153|gb|ADX69840.1| UDP-glucose 4-epimerase [Lactobacillus helveticus H10] gi|328464842|gb|EGF36149.1| UDP-galactose 4-epimerase [Lactobacillus helveticus MTCC 5463] Length = 330 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVG-RPDIDLLKPK------DFASFFL 47 MK LVIG G I V++ ++ + G R +D PK D FL Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVD---PKAKFYQGDIEDTFL 57 Query: 48 ------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 D +++ AAY+ V ++ +P + N G ++ +A + + + S+ Sbjct: 58 VSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVKYLVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ + PI E +P NP+N YG++K+ E+ +A Sbjct: 118 AATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMA 153 >gi|255523728|ref|ZP_05390694.1| polysaccharide biosynthesis protein CapD [Clostridium carboxidivorans P7] gi|296186732|ref|ZP_06855134.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] gi|255512597|gb|EET88871.1| polysaccharide biosynthesis protein CapD [Clostridium carboxidivorans P7] gi|296048769|gb|EFG88201.1| NAD-binding domain 4 [Clostridium carboxidivorans P7] Length = 338 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 44/105 (41%), Gaps = 13/105 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+ N AA V E P A N EG + KAA IY + D V S Sbjct: 78 DVVFNLAAMKHVPSCEYNPTEAIKTNVEGMENVIKAA-------IYNNVDSVVFTSSDKA 130 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 I NP N YG +KL E+ V N ++T +V FG+ Sbjct: 131 I------NPTNTYGATKLLAEKLVQGANFNKGNVKTRFVAVRFGN 169 >gi|227538988|ref|ZP_03969037.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] gi|227241191|gb|EEI91206.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33300] Length = 349 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------GIPCIYIS 99 F + PD +I+ AA + VD++ +P N G + AA I G +IS Sbjct: 72 FRQYKPDGVIHLAAESHVDRSITDPTAFVMTNVIGTVNLLNAAKEIWRDNFEGKRFHHIS 131 Query: 100 TDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TD VF L T + E + +P + Y SK + + V +Y + Y Sbjct: 132 TDEVFGALGATGLFTEETKYDPHSPYSASKASSDHFVRAYHDTY 175 >gi|58580415|ref|YP_199431.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425009|gb|AAW74046.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 374 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIG 92 A PD ++N AA + VD++ + P N G A+ +A A S Sbjct: 89 ARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARSDA 148 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 149 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 199 >gi|219670472|ref|YP_002460907.1| dTDP-glucose 4,6-dehydratase [Desulfitobacterium hafniense DCB-2] gi|219540732|gb|ACL22471.1| dTDP-glucose 4,6-dehydratase [Desulfitobacterium hafniense DCB-2] Length = 337 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F + PDVI+N AA + VD++ +P + N G + A GI + +STD Sbjct: 68 QIFENEKPDVIVNFAAESHVDRSIADPSVFLLTNVFGTQVLLDACKKYGISRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 V+ L D F +P + Y SK + + V +Y Y I Sbjct: 128 VYGDLPLDRPDLFFTEETPIQTSSPYSASKASADLLVQAYHRTYGI 173 >gi|189500842|ref|YP_001960312.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides BS1] gi|189496283|gb|ACE04831.1| NAD-dependent epimerase/dehydratase [Chlorobium phaeobacteroides BS1] Length = 330 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G + A D GI I ++ GL++ +E +P N YGKSK Sbjct: 79 LYYDVNVQGTMNVLDAMDKKGIKSIVFTSSVAVYGLNKENPNETHRADPFNHYGKSKWQA 138 Query: 132 EE 133 EE Sbjct: 139 EE 140 >gi|294146633|ref|YP_003559299.1| oxidoreductase-like protein [Sphingobium japonicum UT26S] gi|292677050|dbj|BAI98567.1| oxidoreductase-like protein [Sphingobium japonicum UT26S] Length = 331 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 6/114 (5%) Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 A+ ++E E S N + A+ + G+ +Y S+ V ++ TP DE +P +P Sbjct: 78 AMYRSEGAREEFLSANRDSTAALLAESRKAGVARFVYCSSIGVHGDVAETPADENAPFDP 137 Query: 121 LNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 + Y +SKL E + + + VI+R +Y G +L M R+ ++ R Sbjct: 138 RDPYQESKLLAEDLCRDAMMRPGMDVVIIRPCAIYGP-GDTRMLKMFRMVQQGR 190 >gi|302346596|ref|YP_003814894.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica ATCC 25845] gi|302150751|gb|ADK97012.1| dTDP-glucose 4,6-dehydratase [Prevotella melaninogenica ATCC 25845] Length = 384 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPC 95 F + D ++N AA + VD++ ++P++ S+N G + AA D G P Sbjct: 72 KLFAEYDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGKDEQGYPT 131 Query: 96 I-------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P P + Y SK + + V +Y + Y Sbjct: 132 WKEGKRYHQVSTDEVYGSLGAEGYFTEETPLCPHSPYSASKTSADHFVMAYHDTY 186 >gi|206900525|ref|YP_002250034.1| dTDP-glucose 4,6-dehydratase [Dictyoglomus thermophilum H-6-12] gi|206739628|gb|ACI18686.1| dTDP-glucose 4,6-dehydratase [Dictyoglomus thermophilum H-6-12] Length = 336 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 12/114 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-------GIPCIYI 98 F F+P ++N AA + VD++ + PEI N G + A + I I Sbjct: 72 FEEFNPQYVVNFAAESHVDRSIEGPEIFVKTNVYGTHVLLDVAKEYWENKKMEDVRFIQI 131 Query: 99 STDYVFDGL---SRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRT 147 STD V+ L S+ E SP P + Y +K + SY T N+ ++ T Sbjct: 132 STDEVYGSLPLESKEKFTEESPLRPNSPYSATKAGADLICRSYFITYNFPVIIT 185 >gi|220924188|ref|YP_002499490.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] gi|219948795|gb|ACL59187.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] Length = 283 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 4/117 (3%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+L A P V+IN A +P A IN +A + G Sbjct: 50 IDVLNTDHLAGAIRRVRPQVVINAVGVIKQLSAAHDPLEAVPINTLLPHRLADLCELAGA 109 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + +STD VFDG + E ++YG SK GE + + + LRT+ + Sbjct: 110 RLVTVSTDCVFDG-KKGQYTEADRVTATDLYGLSKHLGE---ITGRQHVLTLRTSII 162 >gi|15613671|ref|NP_241974.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] gi|11386836|sp|Q9KDV3|GALE_BACHD RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|10173723|dbj|BAB04827.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] Length = 334 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F + S D +I+ AA + V ++ +P + N G + K + Sbjct: 50 DIRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVK 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + + PI E PT P N YG++KLA E+ +Y YV LR Sbjct: 110 KIVFSSTAATYGEPVQIPIQESDPTIPTNPYGETKLAIEKMFHWCQEAYGLQYVCLR 166 >gi|325954710|ref|YP_004238370.1| polysaccharide biosynthesis protein CapD [Weeksella virosa DSM 16922] gi|323437328|gb|ADX67792.1| polysaccharide biosynthesis protein CapD [Weeksella virosa DSM 16922] Length = 639 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 22/123 (17%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYI 98 K F+ F PD++ + AAY V E P + + N G +A + G+ + I Sbjct: 358 KRMEQIFIRFRPDIVFHAAAYKHVPLMEQYPFESVNTNVRGTKNVADLSVLYGVKKFVMI 417 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIF 154 STD NP N+ G +K E V+ N+++ R ++ Sbjct: 418 STD--------------KAVNPTNVMGATKRIAEIYVSCLNKKSATNFIVTRFG---NVL 460 Query: 155 GSN 157 GSN Sbjct: 461 GSN 463 >gi|218665669|ref|YP_002425778.1| UDP-glucose 4-epimerase [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517882|gb|ACK78468.1| UDP-glucose 4-epimerase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 332 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 32/212 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASFFL 47 LV+G G I ++ M Q ++ + G PD DL F Sbjct: 9 VLVVGGAGYIGSHMAKMLAQAGFGVVILDNLSTGFPDAARYGDLIRGDLSNQALLDRLFH 68 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + +++ AA + V ++ P + + N + A + I+ S+ +F Sbjct: 69 EHAFVAVLHFAALSQVGESVRAPALYYRNNVANTQNLLDAMLRHDVRRFIFSSSAAIFGE 128 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SIFG-- 155 + I+E P P+N YG+SK EE +A Y + Y + + Y G Sbjct: 129 PASAYIEETHPQRPINPYGRSKRMVEEMLADYDHAYGLRSVSLRYFNAAGADPEGELGER 188 Query: 156 ----SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L+ A RRE I++ D + TP Sbjct: 189 HDPESHLIPLVLQAANGRREHIAIYGDDYPTP 220 >gi|269128400|ref|YP_003301770.1| UDP-glucose 4-epimerase [Thermomonospora curvata DSM 43183] gi|268313358|gb|ACY99732.1| UDP-glucose 4-epimerase [Thermomonospora curvata DSM 43183] Length = 318 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 8/110 (7%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +++ AA + V ++ ++P + + N + A+ +A G+ ++ ST + TPI Sbjct: 68 VLHFAAKSLVGESMEKPGLYWDRNLGESLALLEAMRRAGVGQIVFSSTAATYGEPQSTPI 127 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFG 155 E PT P N YG SKLA + ++ Y + V LR A Y FG Sbjct: 128 LETDPTRPTNPYGASKLAIDTALSEYARMHGFGAVSLRYFNVAGAYGRFG 177 >gi|223938792|ref|ZP_03630680.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223892490|gb|EEF58963.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 321 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +I+ AA V + DEPE +N EG I +AA G+ + I++ G++R Sbjct: 79 DQVIHLAARAGVRPSLDEPEFFQQVNVEGTVNILEAARRHGVKKVLIASSSSVYGVNRKI 138 Query: 111 PIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNY 142 P E P + ++ Y SKLA E Y + Y Sbjct: 139 PFAESDPVFSVISPYAASKLACEALGHVYHHVY 171 >gi|116329444|ref|YP_799164.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329952|ref|YP_799670.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122188|gb|ABJ80231.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123641|gb|ABJ74912.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 318 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFD 105 FSP+ + + AA V +A ++P IN +G + ++ S+ + IYIS+ V+ Sbjct: 68 EFSPNTVFHLAAQPFVPRAVEDPGETLEINVQGTLNLLESLRSLKERVRFIYISSSDVYG 127 Query: 106 GLSRT--PIDEFSPTNPLNIYGKSKLAGE 132 + + P+ E PLN Y SK E Sbjct: 128 NIPESCLPVQESVIPAPLNPYSSSKFCAE 156 >gi|31794804|ref|NP_857297.1| UDP-glucose 4-epimerase GALE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) [Mycobacterium bovis AF2122/97] gi|57117137|ref|NP_215015.2| UDP-glucose 4-epimerase GALE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase) [Mycobacterium tuberculosis H37Rv] gi|121639547|ref|YP_979771.1| UDP-glucose 4-epimerase galE1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663497|ref|YP_001285020.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|148824838|ref|YP_001289592.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis F11] gi|167968555|ref|ZP_02550832.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis H37Ra] gi|215405682|ref|ZP_03417863.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis 02_1987] gi|215413554|ref|ZP_03422226.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis 94_M4241A] gi|215424876|ref|ZP_03422795.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T92] gi|215432605|ref|ZP_03430524.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis EAS054] gi|215447971|ref|ZP_03434723.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T85] gi|218755412|ref|ZP_03534208.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis GM 1503] gi|219559705|ref|ZP_03538781.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis T17] gi|224992044|ref|YP_002646733.1| UDP-glucose 4-epimerase [Mycobacterium bovis BCG str. Tokyo 172] gi|254552746|ref|ZP_05143193.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260184551|ref|ZP_05762025.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|260198673|ref|ZP_05766164.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|260202817|ref|ZP_05770308.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289441063|ref|ZP_06430807.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|289445227|ref|ZP_06434971.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|289555893|ref|ZP_06445103.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 605] gi|289571870|ref|ZP_06452097.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T17] gi|289572281|ref|ZP_06452508.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289747470|ref|ZP_06506848.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 02_1987] gi|289748148|ref|ZP_06507526.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T92] gi|289755761|ref|ZP_06515139.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis EAS054] gi|289759792|ref|ZP_06519170.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis T85] gi|289763810|ref|ZP_06523188.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis GM 1503] gi|294995455|ref|ZP_06801146.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 210] gi|297636306|ref|ZP_06954086.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 4207] gi|297733300|ref|ZP_06962418.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN R506] gi|298527110|ref|ZP_07014519.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 94_M4241A] gi|306777987|ref|ZP_07416324.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu001] gi|306778518|ref|ZP_07416855.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu002] gi|306786540|ref|ZP_07424862.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu003] gi|306790907|ref|ZP_07429229.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu004] gi|306791227|ref|ZP_07429529.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu005] gi|306796013|ref|ZP_07434315.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu006] gi|306801260|ref|ZP_07437928.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu008] gi|306805474|ref|ZP_07442142.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu007] gi|306969766|ref|ZP_07482427.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu009] gi|306974105|ref|ZP_07486766.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu010] gi|307081813|ref|ZP_07490983.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu011] gi|307086428|ref|ZP_07495541.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu012] gi|313660632|ref|ZP_07817512.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN V2475] gi|7437261|pir||C70562 probable DTDP-Glucose 4 - Mycobacterium tuberculosis (strain H37RV) gi|31620401|emb|CAD95844.1| UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE 4-EPIMERASE) [Mycobacterium bovis AF2122/97] gi|48596284|emb|CAB00927.2| UDP-GLUCOSE 4-EPIMERASE GALE1 (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHATE GALACTOSE 4-EPIMERASE) (URIDINE DIPHOSPHO-GALACTOSE 4-EPIMERASE) [Mycobacterium tuberculosis H37Rv] gi|121495195|emb|CAL73681.1| UDP-glucose 4-epimerase galE1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148507649|gb|ABQ75458.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|148723365|gb|ABR07990.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis F11] gi|224775159|dbj|BAH27965.1| UDP-glucose 4-epimerase [Mycobacterium bovis BCG str. Tokyo 172] gi|289413982|gb|EFD11222.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T46] gi|289418185|gb|EFD15386.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CPHL_A] gi|289440525|gb|EFD23018.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 605] gi|289536712|gb|EFD41290.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis K85] gi|289545624|gb|EFD49272.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T17] gi|289687998|gb|EFD55486.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis 02_1987] gi|289688735|gb|EFD56164.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis T92] gi|289696348|gb|EFD63777.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis EAS054] gi|289711316|gb|EFD75332.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis GM 1503] gi|289715356|gb|EFD79368.1| NAD-dependent epimerase/dehydratase [Mycobacterium tuberculosis T85] gi|298496904|gb|EFI32198.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis 94_M4241A] gi|308213701|gb|EFO73100.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu001] gi|308328455|gb|EFP17306.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu002] gi|308328864|gb|EFP17715.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu003] gi|308332705|gb|EFP21556.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu004] gi|308340198|gb|EFP29049.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu005] gi|308343485|gb|EFP32336.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu006] gi|308347983|gb|EFP36834.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu007] gi|308351925|gb|EFP40776.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu008] gi|308352684|gb|EFP41535.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu009] gi|308356559|gb|EFP45410.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu010] gi|308360517|gb|EFP49368.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu011] gi|308364132|gb|EFP52983.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis SUMu012] gi|323717684|gb|EGB26885.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis CDC1551A] gi|326905469|gb|EGE52402.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis W-148] gi|328460402|gb|AEB05825.1| UDP-glucose 4-epimerase galE1 [Mycobacterium tuberculosis KZN 4207] Length = 314 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 D + P+V+ + AA V ++ +P+ ++N G +A+AA G+ I ++ Sbjct: 61 DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120 Query: 101 D--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ P E +PT+P + Y K+AGE + ++ + Y Sbjct: 121 SGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLY 164 >gi|325094227|gb|EGC47537.1| UDP-glucose 4-epimerase [Ajellomyces capsulatus H88] Length = 373 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRP---DIDLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP ID+ D F + PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEAINRIELICGRRPGFVKIDITNEADLDRAFEQY-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + +A I I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYYVNVYGSICLLRAMKRHNITNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K E + + N Sbjct: 159 TKFVVETAITDFIN 172 >gi|237751175|ref|ZP_04581655.1| galE [Helicobacter bilis ATCC 43879] gi|229373620|gb|EEO24011.1| galE [Helicobacter bilis ATCC 43879] Length = 345 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 25/164 (15%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFAS---FFLSFSPDVIINPAAYTAVDKAED 68 I +LS+ +++ E ++ D L +D A+ F + D +++ A+ +V ++ + Sbjct: 30 IVDNLSTGFLKNYEYLKHQFGDRVRLVREDLANCEEVFKQYKIDTVLHFGAFISVAQSVE 89 Query: 69 EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---------RTPIDEFSPTN 119 +P + ++ N +K + Y +++F + P+ E P Sbjct: 90 DPILYYTNNT------SKTLQLLSYCAKYKVKNFIFSSTAAVYGEPNEEHIPVTESCPLK 143 Query: 120 PLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFL 159 P+N YG SKL E + NYVILR +++ G+N L Sbjct: 144 PINPYGWSKLMVETMLQDIAESAKINYVILR---YFNVAGANML 184 >gi|117619106|ref|YP_858527.1| UDP-glucose 4-epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560513|gb|ABK37461.1| UDP-glucose 4-epimerase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 337 Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F D +I+ AA AV ++ P + N G + +A G+ Sbjct: 58 DIRDPALLDRIFSEQRIDAVIHFAALKAVGESTRLPLAYYENNLSGTLVLLQAMQRAGVH 117 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ + TPI E P + N YG+SKL EE Sbjct: 118 NLVFSSSATVYGDPANTPIREDFPRSATNPYGRSKLIIEE 157 >gi|332084697|gb|EGI89885.1| dTDP-glucose 4,6-dehydratase [Shigella boydii 5216-82] Length = 355 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTAHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|327190502|gb|EGE57598.1| UDP-glucuronic acid epimerase protein [Rhizobium etli CNPAF512] Length = 393 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSR 109 PD++I+ AA V + + PE N EG+ I + A + + + + ST ++ + Sbjct: 132 PDILIHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYGANAT 191 Query: 110 TPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E + PL IY +K + E SY + + I TA+ ++++G Sbjct: 192 VPFRETDRADEPLTIYAATKKSMELMAHSYAHLHKIPTTAFRFFTVYG 239 >gi|312113611|ref|YP_004011207.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] gi|311218740|gb|ADP70108.1| NAD-dependent epimerase/dehydratase [Rhodomicrobium vannielii ATCC 17100] Length = 346 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 10/127 (7%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R D+ ++ +D F D +I+ AA + ++ P+I ++IN + + +A+ A Sbjct: 53 RKDVRDVQVEDLEGF------DAVIHLAALSNDPLSDLNPDITYAINHKASVRLAELAKK 106 Query: 91 IGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILR 146 G+ I S+ + IDE NP+ YG+SK+ E + ++ V LR Sbjct: 107 AGVKRFIMASSCSNYGRAGEALIDETGDLNPVTAYGQSKVRSERDIGLIADDGFCPVFLR 166 Query: 147 TAWVYSI 153 A Y + Sbjct: 167 PATAYGV 173 >gi|254819876|ref|ZP_05224877.1| UDP-glucose 4-epimerase GalE1 [Mycobacterium intracellulare ATCC 13950] Length = 314 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + P+V+ + AA V + +P+ S+N G +A+AA G+ ++ S Sbjct: 61 DLEAILDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVIGTVRLAEAARRAGVRKVVHTS 120 Query: 100 TDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + G+ R P E PT+P + Y K+AGE + ++ + Y Sbjct: 121 SGGSIYGVPPRYPTPETVPTDPASPYAAGKVAGEIYLNTFRHLY 164 >gi|213961831|ref|ZP_03390097.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sputigena Capno] gi|213955620|gb|EEB66936.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga sputigena Capno] Length = 330 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 8/99 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----DSI-GIPCIYISTDYVFD 105 D II+ AA + VD++ ++P I N G ++ +AA D++ G ++STD V+ Sbjct: 78 DGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKDNMQGKRFYHVSTDEVYG 137 Query: 106 GLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L T E +P +P + Y SK + + V +Y N Y Sbjct: 138 ALEMDNTLFTEQTPYDPQSPYSASKASSDHFVRAYHNTY 176 >gi|148238428|ref|YP_001223815.1| UDP-glucose-4-epimerase [Synechococcus sp. WH 7803] gi|147846967|emb|CAK22518.1| UDP-glucose-4-epimerase [Synechococcus sp. WH 7803] Length = 351 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP---DVIINPAAYTAVDKAE 67 +I + SS+ Q+++II D D+ + D F D +I+ A +V ++ Sbjct: 43 RIKELTSSVNTQNLKII-----DGDIRRSVDLFKAFNCLDGKEIDAVIHFAGLKSVGESM 97 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGK 126 +P + IN G + A G + S+ G S+ I+E S P+N YG+ Sbjct: 98 KKPLKYWDINVNGTSNLLMAMSKHGCKTLVFSSSCTVYGTSKQKKINEASTIAPINPYGR 157 Query: 127 SKLAGEEKVASYTNN 141 +K A E+ + N+ Sbjct: 158 TKAAVEQMLLDQFNS 172 >gi|189424572|ref|YP_001951749.1| polysaccharide biosynthesis protein CapD [Geobacter lovleyi SZ] gi|189420831|gb|ACD95229.1| polysaccharide biosynthesis protein CapD [Geobacter lovleyi SZ] Length = 638 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 26/133 (19%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-----IY 97 A F SF P V+ + AAY V E P A N G +A AA + C + Sbjct: 352 ACLFDSFIPQVVFHAAAYKHVPMMEYNPMEAVCNNVGGTMHLADAAHA----CRAERFVM 407 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGS 156 ISTD NP N+ G SK A E V + ++ T ++ GS Sbjct: 408 ISTD--------------KAVNPTNVMGASKRAAELYVQALAQGSHTCFTTVRFGNVLGS 453 Query: 157 NFLLSMLRLAKER 169 N S++ L KE+ Sbjct: 454 NG--SVIPLFKEQ 464 >gi|71280503|ref|YP_268819.1| polysaccharide biosynthesis protein [Colwellia psychrerythraea 34H] gi|71146243|gb|AAZ26716.1| polysaccharide biosynthesis protein [Colwellia psychrerythraea 34H] Length = 337 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 15/90 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA + G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALACGVKDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 P+N+YG +KL ++ A+ N Sbjct: 131 -----KACAPINLYGATKLVSDKLFAAANN 155 >gi|325289675|ref|YP_004265856.1| dTDP-glucose 4,6-dehydratase [Syntrophobotulus glycolicus DSM 8271] gi|324965076|gb|ADY55855.1| dTDP-glucose 4,6-dehydratase [Syntrophobotulus glycolicus DSM 8271] Length = 327 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 11/118 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA-------KA 87 D+ K F + PD +IN AA + VD++ D+P I N G I K Sbjct: 60 DICDEKHFTKIIKEYDPDYVINFAAESHVDRSIDDPSIFGDTNIMGTLNILQCLKNFWKK 119 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNNY 142 ++ + ISTD V+ L D F+ ++ P + Y SK + V ++ Y Sbjct: 120 SNDQNKKFLQISTDEVYGSLENDD-DSFTESSLLMPNSPYSASKAGADLMVRAFVKTY 176 >gi|307320264|ref|ZP_07599683.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] gi|306894143|gb|EFN24910.1| NAD-dependent epimerase/dehydratase [Sinorhizobium meliloti AK83] Length = 324 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 DV+ + AA AE EP +AF + A G + +AA + + ++ GL+ + Sbjct: 75 DVVFHQAAIRITQCAE-EPRLAFDVLAGGTFDVLEAAIKASVSKVVAASSASVLGLAESF 133 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 ++ P N IYG +K+ E + S+T NYV LR VY Sbjct: 134 PTTEDHHPYNNRTIYGAAKVFNEGLLRSFTEMYGLNYVALRYFNVYG 180 >gi|296168675|ref|ZP_06850424.1| dTDP-glucose-4,6-dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896584|gb|EFG76225.1| dTDP-glucose-4,6-dehydratase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 331 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA + VD A D+P N G I +A G +ISTD V+ L Sbjct: 72 DAVVHFAAESHVDNALDDPAPFLHTNVVGTFTILEAVRRHGGRLHHISTDEVYGDLELDD 131 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 F +P NP + Y +K + V ++ +Y + T Sbjct: 132 PHRFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRAT 170 >gi|270296625|ref|ZP_06202824.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270272612|gb|EFA18475.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 298 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Query: 46 FLSFSPDVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDY 102 FL DV+++ + K E E + F +N +G + A + +G+P I+IST Sbjct: 48 FLLVHYDVVLHACGKAHMIPKTEAEKQAFFDVNYQGTVNLCAALEKVGVPKALIFISTVA 107 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 V+ + E P Y KSK+ EE + + N Sbjct: 108 VYGCEFGNLVTEEHPLEGNTPYAKSKIMAEEYLTEWCRN 146 >gi|269836998|ref|YP_003319226.1| dTDP-glucose 4,6-dehydratase [Sphaerobacter thermophilus DSM 20745] gi|269786261|gb|ACZ38404.1| dTDP-glucose 4,6-dehydratase [Sphaerobacter thermophilus DSM 20745] Length = 345 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 42/198 (21%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRT 110 D ++N AA T VD++ + + N G + +AA G+ +++STD V+ + Sbjct: 78 DAVVNFAAETHVDRSLLDADDFLRTNVVGTHVLLEAAREHGVRHFVHVSTDEVYGDVPVG 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFG--SNFLLSMLR 164 E P P + Y SK GE VA++ I R + Y + F+ M+ Sbjct: 138 ESREEDPLRPRSPYSASKAGGEMMVLAAVATHGVPATITRGSNTYGPYQYPEKFIPLMIT 197 Query: 165 LAKERREISVVCDQF--------------------------------GTPTSALQIARAI 192 A E R + + D G P L +AR I Sbjct: 198 NALEGRPLPIYGDGLQVRDWIHVLDHCSGIETVLLKGKPGEAYNIGGGNPRQNLDVAREI 257 Query: 193 IQI---AHNLIENSDTSL 207 + + H+LI++ + L Sbjct: 258 LDLLGQPHDLIQHVEDRL 275 >gi|283798825|ref|ZP_06347978.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] gi|291073512|gb|EFE10876.1| dTDP-glucose 4,6-dehydratase [Clostridium sp. M62/1] Length = 340 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 32/151 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRV----------------GRPDIDLLKP-- 39 MK +V G G I + V D +I+ + G+P+ +K Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYQIVNLDLLTYAGNLETLKPVEGKPNYKFVKGDI 60 Query: 40 ---KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 K F PDV++N AA + VD++ +PE N G + A GI Sbjct: 61 ADRKFIFDLFREEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACKEFGIKRY 120 Query: 97 Y-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 121 HQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|254422086|ref|ZP_05035804.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] gi|196189575|gb|EDX84539.1| UDP-glucose 4-epimerase [Synechococcus sp. PCC 7335] Length = 342 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F +++ +++ AAY AV ++ EP + N G + +A + G + S+ Sbjct: 78 FSTYNVAAVMHFAAYIAVGESVSEPAKYYRNNVCGTLNLLEAMVAAGFKRLVFSSTCAIY 137 Query: 106 GLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 G +T PI E P NP++ Y SKL E+ + + + Y + + Y Sbjct: 138 GPPKTVPIPEDHPQNPISPYATSKLMVEKMLLDFQSAYGLQSVCFRY 184 >gi|16330543|ref|NP_441271.1| UDP-glucose-4-epimerase [Synechocystis sp. PCC 6803] gi|1653034|dbj|BAA17951.1| UDP-glucose 4-epimerase [Synechocystis sp. PCC 6803] Length = 338 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +++ AA+ AV ++ +P+I + N G + +A + GI ++ ST V+ P+ Sbjct: 75 VMHFAAFIAVGESVQKPDIYYQNNVVGTLTLLEAMLAAGIKKFVFSSTCAVYGMPKEIPM 134 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E P +PL+ Y SK E+ +A + Y Sbjct: 135 TESHPIDPLSPYAASKRMVEQILADFDQAY 164 >gi|323141611|ref|ZP_08076494.1| dTDP-glucose 4,6-dehydratase [Phascolarctobacterium sp. YIT 12067] gi|322413953|gb|EFY04789.1| dTDP-glucose 4,6-dehydratase [Phascolarctobacterium sp. YIT 12067] Length = 320 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + P I N GA + A GI + ISTD Sbjct: 49 KLFEEEHPDIVVNFAAESHVDRSIENPGIFLQTNIMGAATLMDACRKYGIRRYHQISTDE 108 Query: 103 VFDGLS 108 V+ L+ Sbjct: 109 VYGDLT 114 >gi|302038999|ref|YP_003799321.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] gi|300607063|emb|CBK43396.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] Length = 307 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 23/174 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------RVGRPD------IDLLKPKDFAS 44 MK LV G G I + +Q DV ++ R P +D+ PK Sbjct: 1 MKVLVTGGAGFIGSHVVDRLLQEGHDVVVVDNLVTGKRKNVPKAAQFYKLDIENPK-LER 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD--Y 102 F + P ++ + AA V ++ ++P +N G + + A G + S+ Sbjct: 60 IFRNERPSIVFHLAAQMNVRRSVEDPMFDAQVNVLGTLNVLEQASKHGARKVIFSSSGGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 ++ P E T PL+ YG SKL GE + Y V LR A VY Sbjct: 120 IYGEQLAFPAPETHITQPLSPYGISKLCGEHYLGYYHRLSGIQVVSLRYANVYG 173 >gi|300787320|ref|YP_003767611.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] gi|299796834|gb|ADJ47209.1| UDP-glucose 4-epimerase [Amycolatopsis mediterranei U32] Length = 319 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 27/196 (13%) Query: 3 CLVIGNNGQIAQSLSSMC----VQDVEIIRVGR--PDIDLLKPKDFAS--FFLSFSPDVI 54 +VIG+ G I + LS+ V+ R R D +L P A F+L+ S Sbjct: 17 AVVIGSAGFIGRRLSATLDLARVRTACFTRQSRFLCDGELAAPIAGAGTVFYLASS---- 72 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD--YVFDGLSRTPI 112 INPA E PE+A + + + + + P + +++ V+D P Sbjct: 73 INPAL------GESHPELARADHVLFSTLLDRLRRRDNPPTVVLTSSGGTVYDPAFAPPY 126 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY--VILRTAWVY-----SIFGSNFLLSMLRL 165 E SP P YG++K+A EE++ S+ VILR + VY + G L L Sbjct: 127 AETSPLKPSGAYGRAKIALEEELLSHAGELPAVILRMSNVYGPGQPTGRGQGVLAHWLSA 186 Query: 166 AKERREISVVCDQFGT 181 A + R + ++ D T Sbjct: 187 ALDSRPLRLIGDVTAT 202 >gi|125974705|ref|YP_001038615.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|256005637|ref|ZP_05430595.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281418826|ref|ZP_06249845.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|125714930|gb|ABN53422.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum ATCC 27405] gi|255990395|gb|EEU00519.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 2360] gi|281407910|gb|EFB38169.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum JW20] gi|316941839|gb|ADU75873.1| NAD-dependent epimerase/dehydratase [Clostridium thermocellum DSM 1313] Length = 314 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 D+ + AA V + D+P F + G + + +++ST V+D + Sbjct: 73 DICYHLAASINVQDSIDDPGTTFQNDVVGTFNVLEQCRKHNTKIVFMSTCMVYDRANDEN 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 I E PT P + Y SK+AGE V SY Sbjct: 133 GITEAHPTKPASPYAGSKIAGENMVLSY 160 >gi|78779696|ref|YP_397808.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9312] gi|78713195|gb|ABB50372.1| putative nucleotide sugar epimerase [Prochlorococcus marinus str. MIT 9312] Length = 355 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL F ++P +++N AA V + + P+ N G I + + + Sbjct: 71 VDLKDKNKVNEIFEKYNPHLVVNLAAQAGVRYSLENPDTYLESNLLGFLNILEGCRNFNV 130 Query: 94 P-CIYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 IY S+ V+ G P E S +PL++Y +K + E SY++ + I LR Sbjct: 131 EHLIYASSSSVYGGNIIMPYSEDHSVDHPLSLYAATKKSNEMLAHSYSHLFKIPSTGLRF 190 Query: 148 AWVYSIFG 155 VY +G Sbjct: 191 FTVYGPYG 198 >gi|81428889|ref|YP_395889.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] gi|78610531|emb|CAI55582.1| UDP-glucose 4-epimerase [Lactobacillus sakei subsp. sakei 23K] Length = 330 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 45/221 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---------------RVGRPDIDLLKPKDF 42 M LV+G G I +Q DV ++ R + DI + KDF Sbjct: 1 MSILVLGGAGYIGSHTVDQLIQRGYDVAVVDSLVTGHQGAINQKARFYQGDI---RDKDF 57 Query: 43 A-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 + F +I+ AA++ V ++ P F N G A+ + + + I S+ Sbjct: 58 MRTVFQQEDVTGVIHFAAFSIVPESMQAPLKYFDNNTYGMTALLEVMNEFDVKRIVFSST 117 Query: 102 YVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G ++ PI E P P N YG+SKL E + +Y +V LR +++ G Sbjct: 118 AATYGEPKSIPIKESDPQLPTNPYGESKLMMETMMKWADKAYGIKFVALR---YFNVVGA 174 Query: 156 -------------SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ L +L++A +R ++S+ D + TP Sbjct: 175 KPDGSIGEDHHPETHLLPIVLQVAAGKRDQLSIFGDDYDTP 215 >gi|328958466|ref|YP_004375852.1| UDP-glucose 4-epimerase [Carnobacterium sp. 17-4] gi|328674790|gb|AEB30836.1| UDP-glucose 4-epimerase [Carnobacterium sp. 17-4] Length = 332 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 39/218 (17%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEI-----IRVGRPDI----------DLLKPKDFAS 44 M LV+G G I + ++ + Q E+ ++ G D D+ S Sbjct: 1 MTVLVLGGAGYIGSHAVDQLIEQQYEVAVIDNLQTGHRDAIHKKARFYQGDIRDKSFMES 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F S + +I+ AA + V ++ +P F+ N G + + I S+ Sbjct: 61 VFEKESIEGVIHFAANSLVGESMQQPLQYFNNNVYGTQVTLETMQKFAVKSIVFSSSAAT 120 Query: 105 DGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG---- 155 G + PI E + TNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 121 YGEPKEVPIKETADTNPESPYGETKLMMEKILKWCDKAYDMKFVALR---YFNVAGAKLD 177 Query: 156 ----------SNFLLSMLRLA-KERREISVVCDQFGTP 182 S+ + +L+ A +R E+++ D + TP Sbjct: 178 GSIGEDHSPESHLVPLILQTALGQREELTIFGDDYATP 215 >gi|295693280|ref|YP_003601890.1| udp-glucose 4-epimerase [Lactobacillus crispatus ST1] gi|295031386|emb|CBL50865.1| UDP-glucose 4-epimerase [Lactobacillus crispatus ST1] Length = 330 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVG-RPDIDLLKPK------DFASFFL 47 MK LVIG G I V++ ++ + G R +D PK D FL Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVD---PKAKFYQGDIEDTFL 57 Query: 48 ------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 D +++ AAY+ V ++ +P + N G ++ +A + + + S+ Sbjct: 58 VSKILRDKKIDAVMHFAAYSLVPESVKKPLKYYDNNVAGMISLLQAMNDASVKYLVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ + PI E +P NP+N YG++K+ E+ +A Sbjct: 118 AATYGIPKKLPITEDTPLNPINPYGETKMMMEKIMA 153 >gi|293572516|ref|ZP_06683495.1| putative dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] gi|291607433|gb|EFF36776.1| putative dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] Length = 90 Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 GI+H++ + SW +FA+ I ++ P + ++++P KA RP YS + K Sbjct: 12 GIYHLSNENS-CSWYEFAKEILKDTDVEVAP------VTSEEFPQKATRPQYSVMSLKK- 63 Query: 269 ANTHNIRISTWKEGVRNIL 287 I TW+E + +L Sbjct: 64 TEALGFVIPTWQEALAQML 82 >gi|89067374|ref|ZP_01154887.1| UDP-glucose 4-epimerase [Oceanicola granulosus HTCC2516] gi|89046943|gb|EAR52997.1| UDP-glucose 4-epimerase [Oceanicola granulosus HTCC2516] Length = 329 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DLL F ++ P +++ AA + V ++ EP + N G+ ++ +AA G + Sbjct: 51 DLLDRDRLDQVFAAYRPAAVMHFAALSQVGESMTEPGKYWRNNVCGSLSLFEAAIHAGCL 110 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + +DE S PLN Y SK A E+ + AS+ VI R Sbjct: 111 DVVFSSTCATYGEQDGVVLDEDSAQQPLNSYAASKRAIEDMLDNFGASHGLRSVIFR 167 >gi|240274874|gb|EER38389.1| UDP-glucose 4-epimerase [Ajellomyces capsulatus H143] Length = 373 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRP---DIDLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP ID+ D F + PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEAINRIELICGRRPGFVKIDITNEADLDRAFEQY-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + +A I I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYYVNVYGSICLLRAMKRHNITNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K E + + N Sbjct: 159 TKFVVETAITDFIN 172 >gi|237719473|ref|ZP_04549954.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229451333|gb|EEO57124.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 649 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 15/92 (16%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 KP F + P+ + + AAY V ED P A N G IA A G + Sbjct: 363 KPDRMEKIFSEYRPEYVFHAAAYKHVPMMEDNPTEAVQNNIHGTRVIADLALKYGTKKFV 422 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 ISTD NP N+ G SK Sbjct: 423 MISTD--------------KAVNPTNVMGCSK 440 >gi|85714989|ref|ZP_01045974.1| UDP-glucose 4-epimerase [Nitrobacter sp. Nb-311A] gi|85698186|gb|EAQ36058.1| UDP-glucose 4-epimerase [Nitrobacter sp. Nb-311A] Length = 336 Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ P+ E +PT PL+ YG SKL E + ++ NYV+LR Sbjct: 113 IFSSTAAVYGNPDEMPVPEEAPTRPLSPYGSSKLMTEIMLHDVATAHGMNYVVLR 167 >gi|203285037|gb|ACH97154.1| QnlA [Escherichia coli] Length = 289 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 48/248 (19%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-----PDIDLLKPKDFASFFLSF------- 49 K L++G +G + +L +++ G +I L+ K+ F Sbjct: 3 KILILGVSGMLGHTLFRFLSSQQDLLVTGTVRHITQEIKLVSSKNIVLMRDVFNKEKLEN 62 Query: 50 ---SPDVIINPAAYTAVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 S DVIIN A+ + D + +N+ + + I+ STD +F+ Sbjct: 63 IINSNDVIINCIG--AIKQKYDNKNTDYILLNSYFPHLLNEICIESNKRLIHFSTDCIFN 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G + D+ S +N +++YGKSK GE Y + + LRT+ + Sbjct: 121 G-EKGNYDDGSLSNVIDMYGKSKYLGE----VYGDKTLTLRTSLI--------------- 160 Query: 166 AKERREISVVCDQFGTPTSALQ-IARAI------IQIAHNLIENS-DTSLRGIFHMTADG 217 E + + D F S + +AI I+IAH L E+ + L GI++++A Sbjct: 161 GHELKSSYSLIDWFLNSNSTVNGYTKAIFSGLPTIEIAHFLYEHVLQSQLHGIYNLSA-- 218 Query: 218 GPVSWADF 225 P+S D Sbjct: 219 APISKFDL 226 >gi|332703438|ref|ZP_08423526.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] gi|332553587|gb|EGJ50631.1| UDP-glucose 4-epimerase [Desulfovibrio africanus str. Walvis Bay] Length = 326 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ P F ++ +++ AA+ V ++ +P+ + N + +A G+ Sbjct: 54 DIADPLQLKLVFKTYPIKAVMHFAAFAYVGESVTDPQKYYLNNVAYTLNLLQAMRGAGVD 113 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ ST + PI E P P+N YG+ KL E +A Y Y Sbjct: 114 KLIFSSTCATYGNPQVIPIPEDHPQAPINPYGRGKLMVENIMADYAQAY 162 >gi|322832467|ref|YP_004212494.1| dTDP-glucose 4,6-dehydratase [Rahnella sp. Y9602] gi|321167668|gb|ADW73367.1| dTDP-glucose 4,6-dehydratase [Rahnella sp. Y9602] Length = 354 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGI 93 + F F PD +++ AA + VD++ D P N G + +AA I Sbjct: 67 AIFSEFKPDAVMHLAAESHVDRSIDGPSAFIDTNITGTYTLLEAARHYWSALEDEKKILF 126 Query: 94 PCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD V+ L T E +P P + Y SK A + V ++ Y Sbjct: 127 RFHHISTDEVYGDLHGTTELFTETTPYAPSSPYSASKAASDHLVRAWNRTY 177 >gi|322418985|ref|YP_004198208.1| polysaccharide biosynthesis protein CapD [Geobacter sp. M18] gi|320125372|gb|ADW12932.1| polysaccharide biosynthesis protein CapD [Geobacter sp. M18] Length = 648 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 21/138 (15%) Query: 23 DVEIIRVGRPDIDLLKPKD-FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 D+ II P + +K KD + F F PDV+ + AAY V E P A N G+ Sbjct: 330 DLRII----PMVGDVKNKDRVETVFDEFCPDVVFHAAAYKHVAMMEYNPAEAVLNNVMGS 385 Query: 82 GAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYT 139 +A AA + + +STD NP N+ G +K + E V A Sbjct: 386 KVVADAAHKTKVRNFVMVSTD--------------KAVNPTNVMGATKRSAEIYVQALAA 431 Query: 140 NNYVILRTAWVYSIFGSN 157 ++ T ++ GSN Sbjct: 432 KSHTKFTTVRFGNVLGSN 449 >gi|242279117|ref|YP_002991246.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio salexigens DSM 2638] gi|242122011|gb|ACS79707.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio salexigens DSM 2638] Length = 340 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%) Query: 40 KDFASFFL-SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIY 97 K+F + L + D ++N AA + VD++ ++P + N GA + + A S GI ++ Sbjct: 65 KEFVTSVLHDYKIDAVVNFAAESHVDRSINDPAPFLTTNTLGAQNMMECARSAGIEKFVH 124 Query: 98 ISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ G + E +P P + Y SK + +Y Y Sbjct: 125 VSTDEVYGTLGPNDPAFSEENPLEPNSPYSASKAGADLMARAYFETY 171 >gi|54296987|ref|YP_123356.1| hypothetical protein lpp1028 [Legionella pneumophila str. Paris] gi|53750772|emb|CAH12179.1| hypothetical protein lpp1028 [Legionella pneumophila str. Paris] Length = 621 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 15/89 (16%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P+++ + AAY V + + +A N G +AKA+ + G I ISTD Sbjct: 358 LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTD-- 415 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP NI G +K E Sbjct: 416 ------------KAVNPTNIMGTTKRVAE 432 >gi|330812709|ref|YP_004357171.1| GDP-mannose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380817|gb|AEA72167.1| putative GDP-mannose 4,6-dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 304 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 5/102 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ K + PD +I+ A T V +A +P IN G + +A + G Sbjct: 39 DLMDAKTLEGLWPEI-PDAVIHLAGQTFVPEAFRDPARTLHINLLGTLNLLQALKTRGFT 97 Query: 95 C--IYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGE 132 +Y+S+ V+ +S PI E +P N Y SKL+ E Sbjct: 98 GTFLYVSSGDVYGQVSEDHLPITELQLPSPRNPYAVSKLSAE 139 >gi|332715759|ref|YP_004443225.1| GDP-fucose synthetase [Agrobacterium sp. H13-3] gi|325062444|gb|ADY66134.1| GDP-fucose synthetase [Agrobacterium sp. H13-3] Length = 331 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 8/149 (5%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + +L + ++ EI++V R ++DL + + + + PDVI AA Sbjct: 18 RVWVAGHTGMVGSALVRRLQRENCEILKVSRSELDLTRQYETEQWMAAARPDVIFVAAAK 77 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFS-- 116 A P N + I K+A IG+ +++ + ++ + PI E S Sbjct: 78 VGGIAANAAYPADFLYTNTLISMNIMKSAADIGVEKLLWMGSSCIYPKFAAQPITENSLL 137 Query: 117 --PTNPLN-IYGKSKLAGEEKVASYTNNY 142 P P N Y +K+A + Y++ Y Sbjct: 138 TGPLEPTNEAYAIAKIAALKLSQFYSSQY 166 >gi|282849005|ref|ZP_06258394.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|282581280|gb|EFB86674.1| NAD-binding protein [Veillonella parvula ATCC 17745] Length = 608 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 23/146 (15%) Query: 2 KCLVIGNNGQ----IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K L++G+ I Q L ++ QD + + D+ F +++PDV+ + Sbjct: 307 KLLLLGHGENSIYLIHQELRNIAPQDTLVPIIA----DIRDKNQLEQIFKNYNPDVVFHA 362 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFS 116 AA+ V E +P A N G +A A + G+ + ISTD Sbjct: 363 AAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVDRFVMISTD--------------K 408 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNY 142 NP ++ G +K E+ V + Y Sbjct: 409 AVNPTSVMGATKRVAEKVVLGMNHTY 434 >gi|253690367|ref|YP_003019557.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756945|gb|ACT15021.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 355 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +VI + A +LSS+ V D E R +D+ + F ++ P ++++ AA + Sbjct: 29 VVIVDKLTYAGNLSSLAPVADSE--RFAFEQVDICDRAELDRVFKTYQPALVMHLAAESH 86 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRTPI 112 VD++ D P N G + +A AD +ISTD VF L T Sbjct: 87 VDRSIDGPAAFIETNIVGTYTMLEAARHYWQSLADADKCAFRFHHISTDEVFGDLHGTD- 145 Query: 113 DEFSPTN---PLNIYGKSKLAGEEKVASYTNNY 142 D F+ T P + Y SK + + V ++ Y Sbjct: 146 DLFTETTSYAPSSPYSASKASSDHLVRAWLRTY 178 >gi|225706798|gb|ACO09245.1| UDP-glucose 4-epimerase [Osmerus mordax] Length = 350 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 7/121 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL F + +++ A AV ++ ++P + +N G + + + G Sbjct: 64 ELDLLDRPGLEKIFQKHTFSAVMHFAGLKAVGESVEQPLKYYRVNLTGTINLLEVMQAHG 123 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGKSKLAGEEKVASYTN-----NYVIL 145 + ++ S+ V+ R PIDE P N YGK+K EE + + N V+L Sbjct: 124 VHNLVFSSSATVYGDPQRLPIDEQHPVGGCTNAYGKTKYFIEEMIMDQCSAEKDWNAVLL 183 Query: 146 R 146 R Sbjct: 184 R 184 >gi|239908669|ref|YP_002955411.1| putative dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] gi|239798536|dbj|BAH77525.1| putative dTDP-glucose 4,6-dehydratase [Desulfovibrio magneticus RS-1] Length = 333 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 +V+ + AA ++ + PE N G+ + +A +G+ ++ ST V+ T Sbjct: 76 EVVFHLAALISIPFSYVAPESYIDTNIRGSLNVVQACRDLGVSRLVHTSTSEVYGTALFT 135 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E P P + Y SK+ ++ V SY + + Sbjct: 136 PITEAHPLQPQSPYSASKIGADQIVLSYHHAF 167 >gi|254409739|ref|ZP_05023520.1| UDP-glucose 4-epimerase [Microcoleus chthonoplastes PCC 7420] gi|196183736|gb|EDX78719.1| UDP-glucose 4-epimerase [Microcoleus chthonoplastes PCC 7420] Length = 332 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDY 102 F S + +++ AAY AV ++ P + N G + +A + + ++ ST Sbjct: 67 QIFASHNIAAVLHFAAYIAVGESVIYPAKYYRNNVSGTLTLLEAMVAADVKTLVFPSTCA 126 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ P+ E P NP+N Y SK E +A + + Y Sbjct: 127 VYGMPQEVPMTEVHPQNPINPYATSKWMMERMLADFDHAY 166 >gi|47559003|gb|AAT35571.1| UDP-galactose-4-epimerase [Listeria monocytogenes] Length = 327 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y YV LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|77864465|gb|ABB05098.1| LipDig2 [Streptomyces aureofaciens] Length = 322 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D+++N AA T VD++ + P + N G + +AA G+ + ISTD V+ + Sbjct: 78 DIVLNFAAETHVDRSIEGPSVFVRTNVLGTHTLLEAARRAGVERFVQISTDEVYGSIDTG 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E S P + Y +K + +Y Y Sbjct: 138 SWTEESALCPNSPYAAAKAGADHLALAYARTY 169 >gi|297616367|ref|YP_003701526.1| polysaccharide biosynthesis protein CapD [Syntrophothermus lipocalidus DSM 12680] gi|297144204|gb|ADI00961.1| polysaccharide biosynthesis protein CapD [Syntrophothermus lipocalidus DSM 12680] Length = 611 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 18/106 (16%) Query: 40 KDFASFFLSFS---PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC- 95 KD A FS P V+ + AAY V E P+ A N G +A AA + G Sbjct: 339 KDHAKIETVFSRHRPQVVFHAAAYKHVPMMEVNPDEAVKNNVGGTIVVACAAKNYGAEVF 398 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 IYISTD NP ++ G +K GE V S Sbjct: 399 IYISTD--------------KAVNPTSVMGATKRVGELIVQSMNGK 430 >gi|126726121|ref|ZP_01741963.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2150] gi|126705325|gb|EBA04416.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2150] Length = 346 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIY 97 F + PD +++ AA + VD++ D P N G + +AA + + Sbjct: 68 FAAHKPDTVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARAYWEGADKPEAFRFHH 127 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD VF L T E +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVFGSLGETGQFTEETPYDPRSPYSASKAASDHLVRAWHETY 173 >gi|321477120|gb|EFX88079.1| hypothetical protein DAPPUDRAFT_305695 [Daphnia pulex] Length = 371 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%) Query: 9 NGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAED 68 NG+ + S V+++ +V DLL + F D +I+ AA AV ++ + Sbjct: 42 NGEKGTAPSLERVEEITGKKVTFYQCDLLDYERLNKIFSQHKIDCVIHFAAMKAVGESME 101 Query: 69 EPEIAFSINAEGA---GAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIY 124 P + + N G + KA + + ++ S+ V+ R PI E SP N N+Y Sbjct: 102 VPLLYYKNNVVGTINLLEVMKAHECYQL--VFSSSCCVYGNPERLPITEDSPIGNVTNVY 159 Query: 125 GKSKLAGEE 133 G++K EE Sbjct: 160 GRTKYLIEE 168 >gi|227823317|ref|YP_002827289.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] gi|227342318|gb|ACP26536.1| UDP-glucose 4-epimerase [Sinorhizobium fredii NGR234] Length = 333 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 69 EPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKS 127 +PE N +G+ + + A + G+ C+++S+ V+ T + E +PT P +YG Sbjct: 87 DPEGFRRANVDGSVRLFEEARTAGVRRCVFLSSRAVYGETPSTILHENTPTQPDTLYGVV 146 Query: 128 KLAGEEKVASYTNNYVILRTAWVYSIFG 155 KLA E+ + S T + + V +G Sbjct: 147 KLAAEDALESMTAPDFVTTSLRVTGAYG 174 >gi|218280965|ref|ZP_03487555.1| hypothetical protein EUBIFOR_00113 [Eubacterium biforme DSM 3989] gi|218217736|gb|EEC91274.1| hypothetical protein EUBIFOR_00113 [Eubacterium biforme DSM 3989] Length = 344 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 11/99 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DV++N AA + VD++ ++PEI N G + A GI + +STD V+ L Sbjct: 76 DVVVNFAAESHVDRSIEDPEIFVKTNVMGTTTLLDACVKYGIQRYHQVSTDEVYGDL--- 132 Query: 111 PIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 P+D F+ PL+ Y +K + + V +Y Y Sbjct: 133 PLDRPDLFFTENTPLHTSSPYSSAKASADLFVLAYHRTY 171 >gi|168183212|ref|ZP_02617876.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] gi|182673598|gb|EDT85559.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Bf] Length = 354 Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D IDE P++ YG +K+A E V SY N Y V++R Sbjct: 153 PCKVVFMSTCMVYDKAPEVGIDEEHRVKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRP 212 Query: 148 AWVYSIF 154 Y F Sbjct: 213 FNTYGPF 219 >gi|291459804|ref|ZP_06599194.1| dTDP-glucose 4,6-dehydratase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417594|gb|EFE91313.1| dTDP-glucose 4,6-dehydratase [Oribacterium sp. oral taxon 078 str. F0262] Length = 338 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 11/109 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 S F PD +IN AA + VD++ +P+I N G + A S GI + +STD Sbjct: 68 SLFEKEKPDFVINFAAESHVDRSVTDPDIFVRTNVMGTVTLLDACRSFGIRRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNYVI 144 V+ L P+D F+ N + Y SK + + V +Y + I Sbjct: 128 VYGDL---PLDRPDLFFTEENQIKASSPYSASKASADLFVMAYHRTFGI 173 >gi|156740225|ref|YP_001430354.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] gi|156231553|gb|ABU56336.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM 13941] Length = 334 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYI 98 +++ +L D + N A T+ + +P IN +I +A + + +Y Sbjct: 74 EYSMNYLVQGQDYLFNLAGQTSHLDSMTDPYTDLEINCRAQLSILEACRKHNPNLKLVYA 133 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ST ++ P+DE +P+++ G +K+AGE Y N Y I Sbjct: 134 STRQIYGKPDYLPVDERHLLHPVDVNGVNKMAGEWYHILYNNVYSI 179 >gi|54293939|ref|YP_126354.1| hypothetical protein lpl0995 [Legionella pneumophila str. Lens] gi|53753771|emb|CAH15229.1| hypothetical protein lpl0995 [Legionella pneumophila str. Lens] gi|307609760|emb|CBW99273.1| hypothetical protein LPW_10521 [Legionella pneumophila 130b] Length = 621 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 15/89 (16%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P+++ + AAY V + + +A N G +AKA+ + G I ISTD Sbjct: 358 LFRRFQPEIVFHAAAYKHVPMLQHQVRVAVFNNVIGTQVVAKASVTFGAEKFILISTD-- 415 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP NI G +K E Sbjct: 416 ------------KAVNPTNIMGTTKRVAE 432 >gi|323136019|ref|ZP_08071102.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322399110|gb|EFY01629.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 327 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL PD++++ A ++ +A E + +N G+ A+ A Sbjct: 54 DLLDEAALDRLVEKRRPDLVVHLAGQASITEAAKSAEQTWRVNFHGSFALGAAVARYAPQ 113 Query: 95 CIYI--STDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVA 136 +++ ST V+ R + E +P PL++Y +SK+A E +A Sbjct: 114 AVFLFASTAQVYGASFREGVLTEEAPLRPLDVYARSKVAAEGALA 158 >gi|237796159|ref|YP_002863711.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] gi|229263700|gb|ACQ54733.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum Ba4 str. 657] Length = 354 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D IDE P++ YG +K+A E V SY N Y V++R Sbjct: 153 PCKVVFMSTCMVYDKAPEVGIDEEHRVKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRP 212 Query: 148 AWVYSIF 154 Y F Sbjct: 213 FNTYGPF 219 >gi|40388616|gb|AAR85521.1| RmlB [Thermoanaerobacterium thermosaccharolyticum] Length = 351 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 10/109 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----DSIGI----P 94 + F + D ++N AA + VD++ EPEI N G + AA D G Sbjct: 69 NLFKHYDIDYVVNFAAESHVDRSIIEPEIFAKTNILGTVTLLNAARNAWQDGDGFKEDKK 128 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L + E +P +P + Y SK A + V +Y + Y Sbjct: 129 FLQVSTDEVYGSLGKEGYFTEKTPLDPHSPYSSSKAAADLIVKAYYDTY 177 >gi|114046905|ref|YP_737455.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] gi|113888347|gb|ABI42398.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] Length = 339 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 34/176 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR------PDI---------------DLL 37 M+ LV G +G I +L + +Q + ++ + + PD D+ Sbjct: 1 MRILVTGGSGFIGSALVRLLIQATNCHVLNIDKLTYASHPDALIGISNHPRYQFVKADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------- 88 F F P+++++ AA T VD++ + P N G + +AA Sbjct: 61 DGARLDILFEQFKPNIVMHLAAETHVDRSIEGPAAFIQNNILGTFTLLEAARRYWTQLDS 120 Query: 89 -DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ++STD VF L+ T + E S +P + Y SK + + V ++ Y Sbjct: 121 LQKLQFRFHHVSTDEVFGSLADTGLFSETSAYDPSSPYSASKASTDHLVRAWHRTY 176 >gi|257468983|ref|ZP_05633077.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|317063231|ref|ZP_07927716.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|313688907|gb|EFS25742.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] Length = 329 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AA++ V ++ +EP F N G + KA + ++ ST + Sbjct: 68 DGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMKKYNVNKIVFSSTAATYGEPENI 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E T P N YG+SKLA E+ + Y I TA Y Sbjct: 128 PILESDATFPTNPYGESKLAVEKMLKWCDKAYGIKYTALRY 168 >gi|229550487|ref|ZP_04439212.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] gi|229304384|gb|EEN70380.1| possible UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 29200] Length = 155 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 19/123 (15%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 ++ ST + PI E +PTNP N YG+SKL E+ I++ W + +G Sbjct: 2 VFSSTAATYGEPKAMPITEETPTNPKNPYGESKLMMEK----------IMK--WCDNAYG 49 Query: 156 SNFL-LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 ++ L +A +++ S+ D T I I+Q+A L + ++ S+ G + T Sbjct: 50 MKYVALRYFNVAGAKKDASIGEDH----TPETHIVPIILQVA--LGQRAELSIFGDDYDT 103 Query: 215 ADG 217 DG Sbjct: 104 PDG 106 >gi|148380682|ref|YP_001255223.1| dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|153933467|ref|YP_001384966.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|153936011|ref|YP_001388436.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|226950136|ref|YP_002805227.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] gi|148290166|emb|CAL84285.1| putative dTDP-glucose 4,6-dehydratase [Clostridium botulinum A str. ATCC 3502] gi|152929511|gb|ABS35011.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. ATCC 19397] gi|152931925|gb|ABS37424.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A str. Hall] gi|226843668|gb|ACO86334.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A2 str. Kyoto] Length = 354 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D IDE P++ YG +K+A E V SY N Y V++R Sbjct: 153 PCKVVFMSTCMVYDKAPEVGIDEEHRVKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRP 212 Query: 148 AWVYSIF 154 Y F Sbjct: 213 FNTYGPF 219 >gi|29348296|ref|NP_811799.1| putative UDP-galactose 4-epimerase [Bacteroides thetaiotaomicron VPI-5482] gi|253569338|ref|ZP_04846748.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29340199|gb|AAO77993.1| putative UDP-galactose 4-epimerase [Bacteroides thetaiotaomicron VPI-5482] gi|251841357|gb|EES69438.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 326 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 31/61 (50%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + +++N EG +A +S G+ + ++ GL++ E P +P N YG+SK Sbjct: 80 LYYTVNVEGTRNTLQAMESNGVARLVFTSSVAVYGLNKDNPSELHPADPFNDYGRSKWQA 139 Query: 132 E 132 E Sbjct: 140 E 140 >gi|147668800|ref|YP_001213618.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. BAV1] gi|146269748|gb|ABQ16740.1| NAD-dependent epimerase/dehydratase [Dehalococcoides sp. BAV1] Length = 313 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 8/134 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 + + + AA+ V + + I N + ++ G+ ++ S+ V+ T Sbjct: 72 EAVFHLAAHANVQNSARDTSIDLENNTLATHNLLESMRKNGVGRLMFASSAAVYGESGLT 131 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSML----- 163 +DE + P P+++YG SKLAGE V++Y++ Y + T + ++ + GS ++ Sbjct: 132 VLDEDYGPLLPISLYGASKLAGEGLVSAYSHLYGLKATMFRFANVVGSRRRNGVIYDFVN 191 Query: 164 RLAKERREISVVCD 177 RL K+ +SV+ D Sbjct: 192 RLKKDPAALSVLGD 205 >gi|296106346|ref|YP_003618046.1| dTDP-glucose 4,6-dehydratase [Legionella pneumophila 2300/99 Alcoy] gi|295648247|gb|ADG24094.1| dTDP-glucose 4,6-dehydratase [Legionella pneumophila 2300/99 Alcoy] Length = 342 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 18/123 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+L S + D +++ AA + VD + D P+I N G + +AA Sbjct: 64 DILDKSLVLSLLREYEIDTLVHFAAESHVDNSIDNPQIFLETNVIGTFTLLEAARIYWLN 123 Query: 89 ----DSIGIPCIYISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 D ++STD V+ L R T + + P +P Y SK + + V +Y Sbjct: 124 ERQWDKSKCRFHHVSTDEVYGSLEREEPAFTEKNSYQPNSP---YSASKASSDHIVRAYY 180 Query: 140 NNY 142 + Y Sbjct: 181 HTY 183 >gi|255073039|ref|XP_002500194.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas sp. RCC299] gi|226515456|gb|ACO61452.1| aminotransferase/S-adenosyl-L-homocysteine hydrolase [Micromonas sp. RCC299] Length = 759 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 13/132 (9%) Query: 35 DLLKP-KDFASFFLSFSPDVIINPAAYTAVDKAEDEP--------EIAFSINAEGAGAIA 85 DL++P + ++ L + + I++ AA T VD + +P E S+ G I Sbjct: 458 DLMQPIPEGIAYELGNNIEFIVHMAAETHVDNSIADPVPFIRNNVESTISLLEYTRGLIR 517 Query: 86 KAADSIGIPCIYISTDYVFD-GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 D Y STD VF L T DE+ P N Y SK A E +Y N Y I Sbjct: 518 NGCDLKAF--FYFSTDEVFGPALGTTMFDEWDRHKPTNPYSSSKSAAENICIAYENTYKI 575 Query: 145 -LRTAWVYSIFG 155 L V + FG Sbjct: 576 PLMIVNVMNAFG 587 >gi|190890269|ref|YP_001976811.1| UDP-glucose 4-epimerase [Rhizobium etli CIAT 652] gi|190695548|gb|ACE89633.1| UDP-glucose 4-epimerase protein [Rhizobium etli CIAT 652] Length = 344 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P F+ + I++ A V + +P + N+ A+ AA GI Sbjct: 51 DIADPDILKKIFIENDIEAIVHFAGSAVVPVSVADPLSYYDNNSGKTRALLSAAIKAGIR 110 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 S+ G + P+ E + NP N YG+SKL E + A+Y NYV LR Sbjct: 111 NFVFSSTAAVYGQQQNDLPVKENASLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 168 >gi|163758302|ref|ZP_02165390.1| carbohydrate oxidoreductase, putative [Hoeflea phototrophica DFL-43] gi|162284591|gb|EDQ34874.1| carbohydrate oxidoreductase, putative [Hoeflea phototrophica DFL-43] Length = 310 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 19/150 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------------------IDLLKPKDF 42 M+ LV+G +G + L ++ R D ID+ Sbjct: 28 MRILVLGGDGMLGHQLLKQLSPRHQVAVTLRQDKSSYDSYGLFTEDNSFFGIDVRSIDRV 87 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + F PD +IN + + ++ INA +A G +++STD Sbjct: 88 SEVMAQFQPDAVINCVGIIKQRPSAKQSILSLEINALLPHRLAVLCRVAGARLVHMSTDC 147 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G + E ++ ++YG+SK GE Sbjct: 148 VFSGRKGNYL-ESDVSDAEDLYGRSKFLGE 176 >gi|222479532|ref|YP_002565769.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222452434|gb|ACM56699.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 310 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 21/174 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-----GRPD-----IDLLKPKDFASFFLSFS 50 + LV G G I +L++ D ++I V G P+ ++ ++ F + Sbjct: 4 QRVLVTGGAGFIGSNLANRLAADNDVIAVDDTYLGTPENLDDNVEFVEADVIDDDFPA-D 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEG-AGAIAKAADSIGIPCIYISTDYVFDGLSR 109 DV+ + AA ++ + E++P+ +N EG A+ +A +Y ST ++ + Sbjct: 63 VDVLFHLAALSSRNMHENDPQRGCRVNVEGFVNAVERARQEGCETVVYASTSSIYGNRTE 122 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSIFGSN 157 +P+D Y SKLA E+ A Y NY LR VY FG N Sbjct: 123 PSPVD--MDVEARTAYEASKLA-RERYAEYYGNYHDMAMAGLRFFSVYQGFGGN 173 >gi|167648874|ref|YP_001686537.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] gi|167351304|gb|ABZ74039.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] Length = 309 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD- 105 L+ DVII AA +++P A ++N + A+AK + G +Y +T+ + Sbjct: 65 LAPKADVIIPLAALVGAPLCKEDPIAARTLNQDAVVALAKRTGA-GQKLVYPTTNSGYGV 123 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 G + E +P NP+++YG +K+A E V Sbjct: 124 GQAGQWCTEETPLNPISLYGVTKMAAESAV 153 >gi|148265798|ref|YP_001232504.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] gi|146399298|gb|ABQ27931.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4] Length = 331 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G + T +F ++ P DE +P NP +IYG SK++G V +Y + Y Sbjct: 120 GCRFYFAGTSEMFGNVTNAPQDEATPFNPRSIYGISKVSGYHLVKNYRSQY 170 >gi|83950109|ref|ZP_00958842.1| UDP-glucose 4-epimerase [Roseovarius nubinhibens ISM] gi|83838008|gb|EAP77304.1| UDP-glucose 4-epimerase [Roseovarius nubinhibens ISM] Length = 332 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 6/150 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAAYT 61 C + G + ++ + + +R G + +DL + +I+ AA Sbjct: 20 CKALAQRGYLPIAVDDLRTGHADAVRWGPLEQLDLAETDRLTEVIAQSGARTVIHFAASA 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VD++ EP ++ N ++ +A + + + S+ G+ R PI E + +P Sbjct: 80 YVDESMREPLRYYTNNVATTVSLLRAMERCDVTRMIFSSSCATYGIPDRMPIAESTSQHP 139 Query: 121 LNIYGKSKLAGEEKVASYTN----NYVILR 146 +N YG++KL EE + + N + +LR Sbjct: 140 VNPYGRTKLMCEEIIRDHFNAVGGQFALLR 169 >gi|253583172|ref|ZP_04860372.1| LOW QUALITY PROTEIN: nucleoside-diphosphate sugar epimerase [Fusobacterium varium ATCC 27725] gi|251834955|gb|EES63516.1| LOW QUALITY PROTEIN: nucleoside-diphosphate sugar epimerase [Fusobacterium varium ATCC 27725] Length = 172 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 15/89 (16%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + P+++ + AA+ V E PE A N G +A+ AD + + ISTD Sbjct: 50 LFKKYKPNIVFHAAAHKHVPLMEHNPEEAVKNNIFGTKNVAECADKYKVEKMVLISTD-- 107 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP NI G +K A E Sbjct: 108 ------------KAVNPTNIMGATKRACE 124 >gi|115526265|ref|YP_783176.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisA53] gi|115520212|gb|ABJ08196.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisA53] Length = 339 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ A AV ++ ++P I + N G A+ A G+ ++ S+ V+ + P+ Sbjct: 76 VMHFAGLKAVGESVEKPIIYYDSNVGGTLALLSAMTDAGVTRLVFSSSATVYGEPQKLPL 135 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 DE P + N YG+SKL E+ Sbjct: 136 DESHPLSATNPYGRSKLMIED 156 >gi|157693959|ref|YP_001488421.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] gi|157682717|gb|ABV63861.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] Length = 309 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ KP + +PD II+ AA +V + ++ +N +G+ + KAA G+ Sbjct: 53 DVTKP-EVVEIIKKIAPDYIIHLAAQVSVAVSVNDYIYDQEVNIKGSLHVIKAASEAGVK 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAW 149 ++ S+ V+ P+D P + YG SKL E + Y +Y ILR + Sbjct: 112 KVVFASSAAVYGDPVYLPVDTAHQLKPGSPYGLSKLTVERYLEMAKTLYDVDYCILRYSN 171 Query: 150 VY 151 VY Sbjct: 172 VY 173 >gi|194434626|ref|ZP_03066882.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1012] gi|194417145|gb|EDX33258.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1012] gi|320178079|gb|EFW53059.1| dTDP-glucose 4,6-dehydratase [Shigella boydii ATCC 9905] gi|332084936|gb|EGI90118.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 155-74] Length = 355 Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F + PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTAHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|322513558|ref|ZP_08066658.1| dTDP-glucose 4,6-dehydratase [Actinobacillus ureae ATCC 25976] gi|322120629|gb|EFX92523.1| dTDP-glucose 4,6-dehydratase [Actinobacillus ureae ATCC 25976] Length = 357 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + PD +++ AA + VD++ D P N G + +AA S Sbjct: 58 VDICDSGRISQLFCKYQPDTVMHLAAESHVDRSIDGPSAFIQTNVIGTYTLLEAARSYWN 117 Query: 92 GIPCI--------YISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 G+ +ISTD V+ L E +P P + Y SK A + V ++ Sbjct: 118 GLSAAKKAAFRFHHISTDEVYGDLHGMEELFTEQTPYAPSSPYSASKAASDHLVRAWFRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|308070489|ref|YP_003872094.1| hypothetical protein PPE_03757 [Paenibacillus polymyxa E681] gi|305859768|gb|ADM71556.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 337 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 20/111 (18%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D + + AA V E +PE AF N G + +A+ G+ I +STD D Sbjct: 87 DYVFHLAALKHVPVCERQPEEAFKTNVHGTENVIRASIEQGVAKVIDVSTDKAVD----- 141 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILRTAWVYSIFGS 156 P+N+YG +K GE S +V +R V GS Sbjct: 142 ---------PVNVYGMTKAIGERLMIRANTLSERTRFVCIRGGNVLGTSGS 183 >gi|260428692|ref|ZP_05782670.1| GDP-L-fucose synthetase [Citreicella sp. SE45] gi|260420286|gb|EEX13538.1| GDP-L-fucose synthetase [Citreicella sp. SE45] Length = 312 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 27/205 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + ++ Q D E+I GR +DL+ ++ PDVI+ AA Sbjct: 9 RVWVAGHRGMVGGAVVRRLAQEDCEVITAGRDVVDLVDQAAVKAWMAQAKPDVIVMAAAK 68 Query: 61 TAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFS-- 116 KA + + F N IA+AA + +++ + ++ + PI E S Sbjct: 69 VGGIKANSDYPVDFLYQNLMIEANIAQAAHENDVERFLFLGSSCIYPKFAPQPIPEDSLL 128 Query: 117 --PTNPLN-IYGKSKLAGEEKVASYTNNYVILRTAWV-------------YSIFGSNFLL 160 P P N Y +K+ G + +Y Y W+ Y + S+ L Sbjct: 129 TGPLEPTNEWYAIAKITGIKLCQAYRTQY---GRDWISAMPTNLYGPGDNYDLNSSHVLP 185 Query: 161 SMLRLAKERREI---SVVCDQFGTP 182 ++LR E +E SV GTP Sbjct: 186 ALLRKFHEAKEAGASSVELWGSGTP 210 >gi|163790004|ref|ZP_02184439.1| UDP-glucose 4-epimerase [Carnobacterium sp. AT7] gi|159874704|gb|EDP68773.1| UDP-glucose 4-epimerase [Carnobacterium sp. AT7] Length = 333 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---RVGRPDI----------DLLKPKDFAS 44 M LV+G G I ++ DV +I R G D+ S Sbjct: 1 MTVLVLGGAGYIGSHAVDQLIEKQYDVAVIDNLRTGHQQAVHKKARFYQGDIRDKSFMES 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + + +++ AA++ V ++ +P F+ N G + + G+ I S+ Sbjct: 61 IFEKEAIEGVLHFAAHSLVGESMQQPLQYFNNNVYGTQVVLEVMQKFGVKLIVFSSSAAT 120 Query: 105 DGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 G + PI E + TNP + YG++KL E + +Y +V LR Sbjct: 121 YGEPKEIPIKETADTNPESPYGETKLMMENILKWCDHAYDMKFVALR 167 >gi|2819|emb|CAA30090.1| unnamed protein product [Kluyveromyces lactis] Length = 687 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 29/208 (13%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 KC+V+ N + +S++ M + + I+ + D+ L+P F + D +++ A Sbjct: 30 KCIVVDNLSNSSYESVARMELLTGQEIKFAKIDLCELEP--LNKLFDDYKIDSVLHFAGL 87 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR----TPIDEF 115 AV ++ P + N G + + S + ++ S+ V+ +R PI E Sbjct: 88 KAVGESTQIPLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDATRFENMIPIPET 147 Query: 116 SPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR---------TAWVYSIFG--SNFL 159 PT P N YGK+KL E+ + + + ++ ILR + + FG +N L Sbjct: 148 CPTGPTNPYGKTKLTIEDMMRDLHFSDKSFSFAILRYFNPIGAHPSGVIGEAFGIPNNLL 207 Query: 160 LSMLRLAKERR-EISVVCDQF----GTP 182 M ++A RR ++ V D + GTP Sbjct: 208 PFMAQVAIGRRPKLYVFGDDYDSVDGTP 235 >gi|326803342|ref|YP_004321160.1| NAD dependent epimerase/dehydratase family protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650381|gb|AEA00564.1| NAD dependent epimerase/dehydratase family protein [Aerococcus urinae ACS-120-V-Col10a] Length = 282 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 21/160 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K L+ G + I S Q D ++++ D + D++++ DVI++ A Sbjct: 3 KILITGKHSYIGNQFSQWLAQWPEDYKVVKESLRD-GTWRQSDWSNY------DVILHVA 55 Query: 59 --AYTAVD-KAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDE 114 A+ + D K ED + + +N + AK A + G+ I++S+ VF G + I + Sbjct: 56 GIAHNSSDPKLED---LYYEVNRDLTIEAAKKAKAEGVGQFIFMSSIIVF-GSKVSKITK 111 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVY 151 +PTNP N YG SKL E + ++ I+R VY Sbjct: 112 DTPTNPDNFYGDSKLQAEAGLGELADDQFKVAIVRPPMVY 151 >gi|328544171|ref|YP_004304280.1| NAD-dependent epimerase/dehydratase family protein [polymorphum gilvum SL003B-26A1] gi|326413914|gb|ADZ70977.1| NAD-dependent epimerase/dehydratase family protein, putative [Polymorphum gilvum SL003B-26A1] Length = 340 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 18/169 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV------------GRPDIDLLKPKD-FASFFLS 48 K LV G G I +L M +++ +R P++++++ L Sbjct: 3 KVLVTGAGGYIGTTLVPMLLEEGYQVRAVDRYFFGKELLCAHPNLEMVQTDTRLIGENLL 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 D +I+ A + E+ + ++IN E A A A G+ + + G Sbjct: 63 DGIDYVIDLVAISNDPSGEEFRDETYAINHESRVATAILAKKCGVKRYILPSSCSLYGFQ 122 Query: 109 RTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS 152 + DE +PTNPL Y K+ E V ++ V+LR A VY Sbjct: 123 EPGVIADETTPTNPLTTYAKANEMAEHGVLPLASDDFVVVVLRQATVYG 171 >gi|315426139|dbj|BAJ47784.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 306 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 1/118 (0%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA +V E + AF +N G + + G+ I ++ G + Sbjct: 71 DAVVHLAAIPSVPMCERNVQRAFEVNVIGLENVLETCVEKGVGKIVFTSSAAVYGDAEGM 130 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFGSNFLLSMLRLAKE 168 ++E + T P ++YG +KL GE + S+ + + A +++++G + L + + Sbjct: 131 LNEDAETRPFSVYGWTKLLGEAILRSFGEKHGVEAVALRIFNVYGRKSMSGFLGVVDQ 188 >gi|310780461|ref|YP_003968793.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] gi|309749784|gb|ADO84445.1| GDP-mannose 4,6-dehydratase [Ilyobacter polytropus DSM 2926] Length = 361 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I ++D+++ R + D+ + PD I N AA + V + Sbjct: 41 NTGRIEHLYMDDLIEDMKLPRKINLHYGDMTDSSNLIRLIQKIQPDEIYNLAAQSHVKVS 100 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE + G I +A +G+ IY ST ++ + P E +P P + Sbjct: 101 FDMPEYTADTDGIGTLRILEAVRLLGMEKKTRIYQASTSELYGKVQEVPQKETTPFYPRS 160 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +KL G +Y +Y Sbjct: 161 PYGVAKLYGFWITKNYRESY 180 >gi|302421476|ref|XP_003008568.1| methionine adenosyltransferase 2 subunit beta [Verticillium albo-atrum VaMs.102] gi|261351714|gb|EEY14142.1| methionine adenosyltransferase 2 subunit beta [Verticillium albo-atrum VaMs.102] Length = 317 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 35/73 (47%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + SP V+++ AA DK + +PE + ++N E ++AK + Sbjct: 46 VDLGDAVELQKVIDDTSPRVVVHCAAQRFPDKVDKDPEASKALNVEATRSLAKLCADRSV 105 Query: 94 PCIYISTDYVFDG 106 IYIST+ G Sbjct: 106 LLIYISTELRLSG 118 >gi|256027000|ref|ZP_05440834.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11] gi|289764984|ref|ZP_06524362.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11] gi|289716539|gb|EFD80551.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Fusobacterium sp. D11] Length = 240 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 26/169 (15%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLA 130 +++N G + + + + +++S+ ++ G DE N LN Y KSK+ Sbjct: 85 YNVNVLGTKNVVQVCEEKNLKLVFVSSPSIYAGAKDQLDVKEDEAPKENDLNYYIKSKIM 144 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---------RREISVVCDQFGT 181 E + S NY+I+R ++ + ++ + +L L + ++++ + C + Sbjct: 145 AENIIKSSKLNYMIIRPRGLFGVGDTSIIPRLLELNMKIGIPLFVDGKQKVDITCVE--N 202 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 AL++A +EN++ S R I+++T D P+ + + F Sbjct: 203 VAYALRLA----------LENNEYS-REIYNITND-EPIEFKEILTLFF 239 >gi|229492317|ref|ZP_04386124.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis SK121] gi|229320726|gb|EEN86540.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis SK121] Length = 343 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 14/129 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + +PD + N AA + V + DEPE + G+ + +A G+ Sbjct: 63 DLSDGARLVTLLAQINPDEVYNLAAQSHVRVSFDEPEHTGNTTGVGSIRLLEAVRMAGLD 122 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVY 151 C Y ++ G + P +E +P P + YG + KV SY T NY R A Y Sbjct: 123 CRFYQASSSEMFGATPPPQNEETPFYPRSPYGAA------KVYSYWITKNY---REA--Y 171 Query: 152 SIFGSNFLL 160 IF N +L Sbjct: 172 GIFAVNGIL 180 >gi|168042311|ref|XP_001773632.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675020|gb|EDQ61520.1| predicted protein [Physcomitrella patens subsp. patens] Length = 396 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIG 92 +DL K F + DV+++ AA V ++ EP +I + G + Sbjct: 107 VDLGDSKAINEVFSKNAIDVVMHFAAVAYVGESTAEPLRYYHNITSNTLGLVEAMVRHRV 166 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWV 150 IY ST + PI E +P P+N YGK+K E+ + Y +N+ + + Sbjct: 167 HKLIYSSTCATYGEPDVMPIKESTPQVPINPYGKAKKMAEDIILDYVKSNDQLAVMILRY 226 Query: 151 YSIFGSN 157 +++ GS+ Sbjct: 227 FNVIGSD 233 >gi|157161536|ref|YP_001458854.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|300946363|ref|ZP_07160641.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|157067216|gb|ABV06471.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|300453955|gb|EFK17575.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] Length = 354 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 19/154 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M CL N +SL+ + + R D+ A+ F F PD++++ AA Sbjct: 31 MDCLTYAGN---LESLAPVAGSE----RYSFSQTDITDAAAVAAQFSEFRPDIVMHLAAE 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRT 110 + VD++ D P N G + +A A +ISTD V+ L T Sbjct: 84 SHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSGLGDAQKQAFRFHHISTDEVYGDLHGT 143 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + V ++ Y Sbjct: 144 DDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTY 177 >gi|266620736|ref|ZP_06113671.1| dTDP-glucose 4,6-dehydratase [Clostridium hathewayi DSM 13479] gi|288867637|gb|EFC99935.1| dTDP-glucose 4,6-dehydratase [Clostridium hathewayi DSM 13479] Length = 340 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 32/151 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG----RPDIDLLKP-------------- 39 MK +V G G I + V D EII + +++ LKP Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYEIINLDLLTYAGNLETLKPVEDKPNYKFVKGDI 60 Query: 40 ---KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 K F PDVI+N AA + VD++ +PE N G + A GI Sbjct: 61 ADRKFIFDLFEKEKPDVIVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACREFGIKRY 120 Query: 97 Y-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 121 HQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|171059921|ref|YP_001792270.1| UDP-glucose 4-epimerase [Leptothrix cholodnii SP-6] gi|170777366|gb|ACB35505.1| UDP-glucose 4-epimerase [Leptothrix cholodnii SP-6] Length = 338 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ A AV ++ +P + N G + +A G+ ++ S+ V+ ++ Sbjct: 76 DAVIHFAGLKAVGESVAQPLSYYDNNVHGTLVLIEAMRDAGVRTLVFSSSATVYGDATQM 135 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 P+ E +PT+ N YG++KL E+ +A Sbjct: 136 PLREDTPTSATNPYGRTKLMVEQILA 161 >gi|186477071|ref|YP_001858541.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] gi|184193530|gb|ACC71495.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815] Length = 300 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 4/120 (3%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 G +D+ D P I++ AA + V A D+P +++N G + +A Sbjct: 47 GERKLDITSLPDCRRLIGELKPAFIVHLAAISFV--AHDDPLEMYNVNVIGTTNLLQACI 104 Query: 90 SIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +G I I++ G + +DE +P P+N Y SKLA E V ++ + I+ T Sbjct: 105 DVGHEPRKILIASSANIYGNAEGVVDENTPAAPVNHYAASKLAMEHLVRTWFDRLPIVVT 164 >gi|53804360|ref|YP_113744.1| dTDP-glucose 4,6-dehydratase [Methylococcus capsulatus str. Bath] gi|53758121|gb|AAU92412.1| dTDP-glucose 4,6-dehydratase [Methylococcus capsulatus str. Bath] Length = 357 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 12/115 (10%) Query: 40 KDFASFFLS-FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---------- 88 ++ + L + PD ++N AA T VD++ D P+ N G + +A Sbjct: 63 RELVEYLLERYQPDAVVNFAAETHVDRSIDGPDAFVHTNVIGTFELLEATRWYWRQLDGE 122 Query: 89 DSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK + V +Y + Y Sbjct: 123 RRKAFRFLHVSTDEVYGTLGATGKFTEETPYRPNSPYSASKAGSDHLVRAYFHTY 177 >gi|84622377|ref|YP_449749.1| dTDP-glucose 4,6-dehydratas [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578648|ref|YP_001915577.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae PXO99A] gi|84366317|dbj|BAE67475.1| dTDP-glucose 4,6-dehydratas [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523100|gb|ACD61045.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 351 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIG 92 A PD ++N AA + VD++ + P N G A+ +A A S Sbjct: 66 ARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARSDA 125 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|331084646|ref|ZP_08333734.1| hypothetical protein HMPREF0987_00037 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410740|gb|EGG90162.1| hypothetical protein HMPREF0987_00037 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 621 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 15/84 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F ++ P+++ + AA+ V ED P A N G AK A G+ I ISTD Sbjct: 361 FATYHPEIVFHAAAHKHVPLMEDSPNEAIKNNVIGTYKTAKMASDYGVKKFILISTD--- 417 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSK 128 NP NI G SK Sbjct: 418 -----------KAVNPTNIMGASK 430 >gi|154488288|ref|ZP_02029405.1| hypothetical protein BIFADO_01862 [Bifidobacterium adolescentis L2-32] gi|154083439|gb|EDN82484.1| hypothetical protein BIFADO_01862 [Bifidobacterium adolescentis L2-32] Length = 340 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D + +PE N EG + +A I ++STD V+ L+ Sbjct: 81 DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVRKYDIRYHHVSTDEVYGDLALDD 140 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P +P + Y +K A + V ++T Y I T Sbjct: 141 PARFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIRAT 179 >gi|121533464|ref|ZP_01665292.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] gi|121308023|gb|EAX48937.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] Length = 331 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 17/159 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--------------GRPDI--DLLKPKDFAS 44 MK LV G G I V+ + V G P I DL Sbjct: 1 MKLLVTGGAGYIGSHTVHELVRAGHTVTVFDNLSKGHRAAVPAGVPLIVGDLRDQDLLTK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 + +++ AA + V ++ +P + N A+ A G+ ++ ST V Sbjct: 61 TLREHQIEGVVHFAADSLVGESMQQPAKYYHNNVVATLALLDAMREGGVGKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + PI E PT P N+YG++KL E +A + Y Sbjct: 121 YGEPAEWPITEDMPTRPTNVYGRTKLVIEGMLADFAMAY 159 >gi|87307256|ref|ZP_01089401.1| hypothetical protein DSM3645_17075 [Blastopirellula marina DSM 3645] gi|87289996|gb|EAQ81885.1| hypothetical protein DSM3645_17075 [Blastopirellula marina DSM 3645] Length = 291 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 84 IAKAADSIGIPC---IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 +AK D + C IYIS+ VF + +DE +P +P GK+ LA EE + S+ + Sbjct: 93 LAKVLDHLPSHCGRLIYISSTGVFGDAAGQVVDEQTPCDPRRSGGKACLAAEELLRSHPS 152 Query: 141 ---NYVILRTAWVYS 152 +V LR A +Y Sbjct: 153 WQAKHVSLRLAGIYG 167 >gi|332295617|ref|YP_004437540.1| dTDP-glucose 4,6-dehydratase [Thermodesulfobium narugense DSM 14796] gi|332178720|gb|AEE14409.1| dTDP-glucose 4,6-dehydratase [Thermodesulfobium narugense DSM 14796] Length = 331 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 + +IN AA T VD++ EP + N G +I + + + +++STD V+ L + Sbjct: 72 EAVINFAAETHVDRSILEPNEFINTNICGTTSILNSLANSDVLLVHVSTDEVYGELGKDG 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E SP P + Y SK + + + +Y Y LRT Sbjct: 132 KFSEDSPLRPNSPYSASKASADLLINAYARTYS-LRT 167 >gi|319949389|ref|ZP_08023456.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4] gi|319436946|gb|EFV91999.1| putative dTDP-glucose 4-epimerase [Dietzia cinnamea P4] Length = 312 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 3/113 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL P P+VI + AA V + ++P +N G +A+AA G+ Sbjct: 56 LDLTDPA-IEDVVAQARPEVIFHLAAQIDVRLSVEDPVHDAEVNVVGTVRLAEAARKAGV 114 Query: 94 PCIYISTD--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 I ++ ++ ++ P+ E P +PL+ Y K+AGE + ++ Y I Sbjct: 115 RRIVFTSSGGSIYGPVTELPVAETRPVDPLSPYAAGKVAGEIYLEMFSRLYGI 167 >gi|254775154|ref|ZP_05216670.1| RmlD substrate binding domain-containing protein [Mycobacterium avium subsp. avium ATCC 25291] Length = 366 Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + PD +++ AA + + +P++A +N G + A ++ P Sbjct: 62 DLLDAEAVRDLVTAHQPDAVVHLAAVVS-PLSYRKPDLARRVNVGGTENLLAACTALSRP 120 Query: 95 CIYISTDYVFDGLSRTP------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++ SR P I +P NP++ YG+ K+ E + + Y + R Sbjct: 121 PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG 180 Query: 149 WV-----YSIFGSNFLLSMLRLAKERREISV 174 + ++ ++LL M + + R +V Sbjct: 181 GIISPDTHASINGDYLLLMRSMPSDNRMHAV 211 >gi|325661764|ref|ZP_08150387.1| hypothetical protein HMPREF0490_01122 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472017|gb|EGC75232.1| hypothetical protein HMPREF0490_01122 [Lachnospiraceae bacterium 4_1_37FAA] Length = 621 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 15/84 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F ++ P+++ + AA+ V ED P A N G AK A G+ I ISTD Sbjct: 361 FATYHPEIVFHAAAHKHVPLMEDSPNEAIKNNVIGTYKTAKMASDYGVKKFILISTD--- 417 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSK 128 NP NI G SK Sbjct: 418 -----------KAVNPTNIMGASK 430 >gi|297621634|ref|YP_003709771.1| UDP-glucose 4-epimerase [Waddlia chondrophila WSU 86-1044] gi|297376935|gb|ADI38765.1| UDP-glucose 4-epimerase [Waddlia chondrophila WSU 86-1044] Length = 322 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D K F S D +++ AA+T + ++ P + N + A + + Sbjct: 52 DASSSKQLDEIFKSQKIDAVMHFAAFTDIGESVANPYQYYRNNVCHTLNLLHAMERYKVD 111 Query: 95 CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 S+ GL +T I E P NP+N YGKSKL E+ ++ + Y + A Y Sbjct: 112 IFIFSSTAAIFGLPQTNKIAESHPKNPINPYGKSKLMVEQMLSDAESAYGLRSCALRY 169 >gi|288928030|ref|ZP_06421877.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 317 str. F0108] gi|288330864|gb|EFC69448.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 317 str. F0108] Length = 382 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 26/153 (16%) Query: 7 GNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 GN G I ++ CV +R D DL+ F D ++N AA + VD+ Sbjct: 43 GNLGTIKNNIDDKRCV----FVRGDIRDRDLVN-----GLFADNEIDYVVNFAAESHVDR 93 Query: 66 AEDEPEIAFSINAEGAGAIAKAA--------DSIGIPCI-------YISTDYVFDGLSRT 110 + ++P++ S+N G + AA D G P +STD V+ L T Sbjct: 94 SIEDPQLFLSVNILGTQNLLDAARKAWVTGKDETGYPTWKAGKRYHQVSTDEVYGSLGDT 153 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V +Y + Y Sbjct: 154 GYFMETTPLCPHSPYSASKASADMFVMAYHDTY 186 >gi|163748304|ref|ZP_02155586.1| dTDP-glucose 4,6-dehydratase [Oceanibulbus indolifex HEL-45] gi|161378423|gb|EDQ02910.1| dTDP-glucose 4,6-dehydratase [Oceanibulbus indolifex HEL-45] Length = 345 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 9/117 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F +PD +++ AA + VD++ D P N G + +AA + Sbjct: 57 DIRDAQALVRIFTDHTPDAVLHLAAESHVDRSIDGPGAFIDTNVTGTYTLLQAARAYWEG 116 Query: 92 -----GIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G ++STD V+ L + E +P P + Y SK A + V ++ Y Sbjct: 117 RGRPDGFRFHHVSTDEVYGSLGAEGYFTEETPYAPNSPYSASKAASDHLVRAWGETY 173 >gi|260890571|ref|ZP_05901834.1| dTDP-glucose 4,6-dehydratase [Leptotrichia hofstadii F0254] gi|260859813|gb|EEX74313.1| dTDP-glucose 4,6-dehydratase [Leptotrichia hofstadii F0254] Length = 401 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 26/125 (20%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 GN G IA+ + RV +D+ K+ A F D ++N AA + VD++ Sbjct: 42 GNLGTIAEEIKDK--------RVKFEKVDIRDQKEIARIFSENEIDFVVNFAAESHVDRS 93 Query: 67 EDEPEIAFSINAEGAGAI---AKAADSI------------GIPCIYISTDYVFDGLSR-- 109 + P+I N G + AK A ++ G+ + +STD V+ LS+ Sbjct: 94 IENPQIFLETNILGTQNLLENAKKAWTVSKDENGYPVYREGVKYLQVSTDEVYGSLSKDY 153 Query: 110 -TPID 113 T ID Sbjct: 154 DTAID 158 >gi|300770341|ref|ZP_07080220.1| capsular polysaccharide biosynthesis protein CapD [Sphingobacterium spiritivorum ATCC 33861] gi|300762817|gb|EFK59634.1| capsular polysaccharide biosynthesis protein CapD [Sphingobacterium spiritivorum ATCC 33861] Length = 638 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 15/99 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 + F +F P V+ + AAY V E+ P N G +A A G+ +++STD Sbjct: 358 NLFDTFKPHVVYHAAAYKHVPMMENHPIEGVRTNVLGTFNLANLAVDFGVDKFVFVSTD- 416 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP NI G +K E V S N+ Sbjct: 417 -------------KAVNPTNIMGATKRIAEIYVQSLNNH 442 >gi|154339507|ref|XP_001562445.1| GDP-mannose 4,6 dehydratase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063028|emb|CAM39477.1| putative GDP-mannose 4,6 dehydratase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 450 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSR 109 DVI++ AA T V+ + + + +N G + + A G ++ISTD V+ Sbjct: 171 DVIVHMAAQTHVENSFSKSLLFTKVNVVGTHTLLECAREYGQLTRFLHISTDEVYGETPA 230 Query: 110 T--PIDEFS----PTNPLNIYGKSKLAGEEKVASYTNNY 142 T P DE S PTNP Y +K A E V+SY +++ Sbjct: 231 TVRPADETSTVLRPTNP---YAATKAAAEHLVSSYHHSF 266 >gi|255020601|ref|ZP_05292664.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus caldus ATCC 51756] gi|254969986|gb|EET27485.1| dTDP-glucose 4,6-dehydratase [Acidithiobacillus caldus ATCC 51756] Length = 374 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-------GIPCIY--ISTDY 102 +V+++ AA + VD++ +P+ N G ++ +AA ++ +P + ISTD Sbjct: 85 NVVVHFAAESHVDRSIHDPDAFIRSNILGTHSLLRAAKTVWLDDPQGSVPHRFHHISTDE 144 Query: 103 VFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 V+ LS P E +P P + Y SK + V +Y + Y + T Sbjct: 145 VYGSLSPGDAPFREDTPYAPNSPYAASKAGSDHLVRAYHHTYGLQTT 191 >gi|188592075|ref|YP_001796673.1| UDP-galactose 4-epimerase [Cupriavidus taiwanensis LMG 19424] gi|170938449|emb|CAP63436.1| UDP-galactose 4-epimerase [Cupriavidus taiwanensis LMG 19424] Length = 339 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F +I+ AA AV ++ +P +S N +G + A + G+ ++ S+ V Sbjct: 70 LFAEHRISAVIHFAALKAVGESVSQPLAYYSNNLDGLLTVCAAMGAAGVKQLVFSSSATV 129 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + PI E P + N YG++KL GE+ Sbjct: 130 YGNPHAVPILEDFPLSATNPYGQTKLMGEQ 159 >gi|167856001|ref|ZP_02478747.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis 29755] gi|167852883|gb|EDS24151.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis 29755] Length = 351 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ F + PD++++ AA + VD++ E+ N G + + Sbjct: 53 RYAFKQIDICDKIALEQIFNEYQPDIVMHLAAESHVDRSIKNSEVFIKTNIWGTYTLLEV 112 Query: 88 ADSI--GIP--------CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A +P +ISTD V+ G S E P P N Y SK A + V Sbjct: 113 ARKYWNDLPEEKKSIFRFHHISTDEVYGDLGTSERQFTEIMPYAPSNPYSASKAASDHLV 172 Query: 136 ASYTNNY 142 ++ Y Sbjct: 173 HAWRRTY 179 >gi|46579775|ref|YP_010583.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. Hildenborough] gi|46449190|gb|AAS95842.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. Hildenborough] gi|311233566|gb|ADP86420.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris RCH1] Length = 340 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I+N AA T VD++ ++ + N G + +AA GIP ++ISTD V+ L Sbjct: 79 DAIVNFAAETHVDRSINDSTPFITTNVLGTQVLLQAALDRGIPRFVHISTDEVYGTLGPE 138 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P P + Y SK + V ++ Y Sbjct: 139 GLFREDTPLAPNSPYSASKAGADLMVRAFHETY 171 >gi|87307567|ref|ZP_01089711.1| dTDP-glucose 4,6-dehydratase [Blastopirellula marina DSM 3645] gi|87289737|gb|EAQ81627.1| dTDP-glucose 4,6-dehydratase [Blastopirellula marina DSM 3645] Length = 358 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---- 88 D DL+ A F P+ I N AA + VD++ D P + N G + +AA Sbjct: 63 DADLI-----ARLLAEFRPNAIFNLAAESHVDRSIDGPAEFVATNVVGTFTLLEAARNYW 117 Query: 89 ------DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + + +STD V+ L +T + E +P +P + Y SK + + V +Y + Sbjct: 118 RELAADRAAEFRFLQVSTDEVYGSLGKTGLFTEATPYSPNSPYSASKASADHFVRAYFHT 177 Query: 142 Y 142 + Sbjct: 178 F 178 >gi|331002853|ref|ZP_08326366.1| hypothetical protein HMPREF0491_01228 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413146|gb|EGG92520.1| hypothetical protein HMPREF0491_01228 [Lachnospiraceae oral taxon 107 str. F0167] Length = 244 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 12/156 (7%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTPI 112 ++ AAY D E P+ A++ N D++ Y S+D V+ + + Sbjct: 23 VVYLAAYHNPDLVEKNPKTAWNTNIISLSFFINEMDNVS-AFYYPSSDSVYGNSIDGKVF 81 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGS--NFLLSMLRLAKE 168 +E TNP+N YGK K E V +Y Y ++R ++ S+ S +F ++ K Sbjct: 82 EEDDDTNPVNTYGKQKALAERIVTTY--GYQVVRYPFLIGTSLLSSKKHFYDHIVESLKS 139 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 + + + D + + S Q A I++ LIE +D Sbjct: 140 KVGMDMFSDSYRSTISFKQAADYIVE----LIEMND 171 >gi|325836660|ref|ZP_08166203.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] gi|325491185|gb|EGC93473.1| dTDP-glucose 4,6-dehydratase [Turicibacter sp. HGF1] Length = 342 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DV++N AA + VD++ +PEI N G + A+ + G+ + +STD V+ L Sbjct: 79 DVVVNFAAESHVDRSVKDPEIFIKTNVLGTQVLMDASRAYGVERYHQVSTDEVYGDL--- 135 Query: 111 PIDE----FSPTNPLNI---YGKSKLAGEEKVASYTNNY 142 P+D F+ PL+ Y SK + + V +Y + Sbjct: 136 PLDRPDLFFTEETPLHTSSPYSASKASADLLVFAYHRTF 174 >gi|257057349|ref|YP_003135181.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] gi|256587221|gb|ACU98354.1| UDP-glucose 4-epimerase [Saccharomonospora viridis DSM 43017] Length = 313 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 39/238 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLSRT 110 D II+ AA T+V ++ + P ++ N + + A G+P + ST+ V + T Sbjct: 72 DGIIHLAAVTSVLRSVEMPAKTYTENVAVTHELLELARIHGVPRFLMASTNAVVGDVGTT 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG------SNFLLSML 163 I E + PL YG +K A E ++ Y Y + A ++ ++G +F+ ++ Sbjct: 132 TITEDTALRPLTPYGATKAACEMLLSGYAGAYGMATCALRFTNVYGPGMSHKDSFVPRLM 191 Query: 164 RLA------------KERREISVVCDQFGTPTSA---LQIARAIIQIAH--NLIENSDTS 206 R A K+RR++ + D A + RAII +++E DT Sbjct: 192 RAALNDSGVKVYGDGKQRRDLVFIDDVVRGVELAWDRRHVGRAIIGAGRSVSVLELIDT- 250 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 + +T G P+ AE++ GG V ++ T +RPAYS D Sbjct: 251 ---VREVT--GRPIP----AEHV----PAPGGEMPAVVVDVSRSAETIGYRPAYSLRD 295 >gi|237653968|ref|YP_002890282.1| UDP-glucose 4-epimerase [Thauera sp. MZ1T] gi|237625215|gb|ACR01905.1| UDP-glucose 4-epimerase [Thauera sp. MZ1T] Length = 340 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 A F +I+ AA AV ++ +P + N G ++ +A D+ G ++ S+ Sbjct: 67 LARVFGEHEVAAVIHFAAKKAVGESVSQPLAYYDNNLHGLLSVLQAMDAAGCRRMVFSSS 126 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 V+ + PI E PT N YG +KL GE+ Sbjct: 127 ATVYGDPASVPIREDFPTTATNPYGWTKLMGEQ 159 >gi|188996472|ref|YP_001930723.1| UDP-glucose 4-epimerase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931539|gb|ACD66169.1| UDP-glucose 4-epimerase [Sulfurihydrogenibium sp. YO3AOP1] Length = 341 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 9/116 (7%) Query: 40 KDFA---SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 KDF F + DV+I+ AA V ++ P + N + G+ Sbjct: 66 KDFQMIEGMFKAKKFDVVIHFAASIVVPESVKNPIKYYMNNTVNTANLINLCLKYGVNRF 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 I+ ST V+ P+ E +PT P+N YG+SKL E + A+ YVILR Sbjct: 126 IFSSTAAVYGQPDEIPVKETTPTQPINPYGRSKLMSETVLNDVGTANPEFKYVILR 181 >gi|297544168|ref|YP_003676470.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841943|gb|ADH60459.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 312 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRT 110 D+ + AA V + D+P+ F + G + + A ++ST V+D + Sbjct: 73 DICYHLAASINVQDSIDDPKTTFYNDTVGTFNVLEQARKHNTKITFMSTCMVYDRATDES 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 I E PT P + Y SK+A E V SY Y V++R Y F Sbjct: 133 GITEDHPTKPASPYAGSKIAAENMVLSYWYTYKLPVVVVRPFNTYGPF 180 >gi|218515285|ref|ZP_03512125.1| UDP-glucose 4-epimerase protein [Rhizobium etli 8C-3] Length = 327 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 FSPD +I+ A V ++ + P + N G+ + + I I S+ G+ Sbjct: 66 FSPDCVIHCGANAYVGESVEMPRKYYRNNVVGSLTLLEVCLDQDIDRIVFSSSCATYGVP 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E +P P+N YG++KL E + + Y I A Y Sbjct: 126 ASLPIQEETPQQPVNPYGRTKLIFEMALEDFAAAYGIRFAALRY 169 >gi|292669665|ref|ZP_06603091.1| UDP-glucose 4-epimerase [Selenomonas noxia ATCC 43541] gi|292648462|gb|EFF66434.1| UDP-glucose 4-epimerase [Selenomonas noxia ATCC 43541] Length = 359 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F D +++ AA + V ++ ++P + F+ N G + +A + ++ ST V+ Sbjct: 92 FTENEVDAVVHFAANSLVGESMEKPLLYFNNNVYGMQVLLEAMVRHSVDKIVFSSTAAVY 151 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 R PI E T P N YG++KL E+ Sbjct: 152 GEPKRVPIREEDETKPTNAYGETKLTMEK 180 >gi|289668424|ref|ZP_06489499.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 351 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------AADSIG 92 A PD ++N AA + VD++ + P N G A+ + AA S Sbjct: 66 ARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPAARSDA 125 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|148698015|gb|EDL29962.1| galactose-4-epimerase, UDP, isoform CRA_c [Mus musculus] Length = 346 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQ++ V ++D+L F S +I+ A AV ++ +P + +N G Sbjct: 50 VQELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTG 109 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGKSKLAGEEKV--- 135 + + + G+ ++ S+ V+ P+DE PT N YGKSK EE + Sbjct: 110 TIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 169 Query: 136 --ASYTNNYVILR 146 A N V+LR Sbjct: 170 CRADTAWNAVLLR 182 >gi|77919403|ref|YP_357218.1| UDP-glucose 4-epimerase [Pelobacter carbinolicus DSM 2380] gi|77545486|gb|ABA89048.1| UDP-galactose 4-epimerase [Pelobacter carbinolicus DSM 2380] Length = 324 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Query: 9 NGQIAQSLSSMCVQDVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 +G I ++ E ++ G+ + DLL F S D +++ +A + V ++ Sbjct: 23 SGHIVTIFDNLSTGHREAVKWGKLVVGDLLDEAALRQLFAENSFDAVMHFSAKSLVGESV 82 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 +P + + N G + +A + + ++ S+ F IDE P P+N YG+ Sbjct: 83 AQPAMYYKNNVIGTFNLLEAMRAADVKRFVFSSSAATFGNPVADRIDENHPQAPINPYGE 142 Query: 127 SKLAGEEKVASYTNNY 142 +KL E + Y Y Sbjct: 143 TKLMVEHMLRDYAAAY 158 >gi|30409988|ref|NP_848476.1| UDP-glucose 4-epimerase [Mus musculus] gi|33112299|sp|Q8R059|GALE_MOUSE RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|20073297|gb|AAH27438.1| Galactose-4-epimerase, UDP [Mus musculus] gi|123122208|emb|CAM15904.1| galactose-4-epimerase, UDP [Mus musculus] gi|148698013|gb|EDL29960.1| galactose-4-epimerase, UDP, isoform CRA_a [Mus musculus] Length = 347 Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQ++ V ++D+L F S +I+ A AV ++ +P + +N G Sbjct: 51 VQELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTG 110 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGKSKLAGEEKV--- 135 + + + G+ ++ S+ V+ P+DE PT N YGKSK EE + Sbjct: 111 TIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 170 Query: 136 --ASYTNNYVILR 146 A N V+LR Sbjct: 171 CRADTAWNAVLLR 183 >gi|219871176|ref|YP_002475551.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis SH0165] gi|219691380|gb|ACL32603.1| dTDP-glucose 4,6-dehydratase [Haemophilus parasuis SH0165] Length = 334 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ F + PD++++ AA + VD++ E+ N G + + Sbjct: 36 RYAFKQIDICDKIALEQIFNEYQPDIVMHLAAESHVDRSIKNSEVFIKTNIWGTYTLLEV 95 Query: 88 ADSI--GIP--------CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A +P +ISTD V+ G S E P P N Y SK A + V Sbjct: 96 ARKYWNDLPEEKKSIFRFHHISTDEVYGDLGTSERQFTEIMPYAPSNPYSASKAASDHLV 155 Query: 136 ASYTNNY 142 ++ Y Sbjct: 156 HAWRRTY 162 >gi|197690568|emb|CAQ19394.1| UDP-glucose 4-epimerase [Geobacillus stearothermophilus] Length = 193 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F D +++ A AV ++ P + N G + + + Sbjct: 58 DLLDYEALDQLFQEHDIDAVMHFAGLKAVGESVQIPLTYYHNNITGTLNLCRVMSKHNVK 117 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ R PIDE P N YG++KL EE Sbjct: 118 KMVFSSSATVYGNPERVPIDETFPLQATNPYGRTKLMIEE 157 >gi|158335848|ref|YP_001517022.1| NAD-dependent epimerase/dehydratase [Acaryochloris marina MBIC11017] gi|158306089|gb|ABW27706.1| NAD-dependent epimerase/dehydratase, putative [Acaryochloris marina MBIC11017] Length = 344 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 18/147 (12%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS---FSPDVIINP 57 + LV G G +L + Q+VE++ + RP DL + +D ++ F P +I Sbjct: 16 RVLVTGATGYTGSTLVQKLLNQNVEVVAIARPSSDLSRWQDAPIRWIQGDVFDPKLIQEA 75 Query: 58 A--------AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP----CIYISTDYVFD 105 T +A+ ++ ++++ + +A A + P ++IST V Sbjct: 76 MEGVNYIFHMVTPFREAKSSDDVYYNVHVKSTQLLANEA--LKQPDFKRFVHISTIGVHG 133 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + P DE T+P ++Y +KL GE Sbjct: 134 HIENPPADETYRTSPGDLYQSTKLEGE 160 >gi|149916004|ref|ZP_01904527.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] gi|149810078|gb|EDM69926.1| NAD-dependent epimerase/dehydratase [Roseobacter sp. AzwK-3b] Length = 335 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDG 106 F PDVI++ AA V + + P N G + +AA +G+ + + ST V+ Sbjct: 74 EFEPDVIVHLAAQAGVRYSLENPRAYLDANVIGTFNVMEAARRLGVQHLLMASTSSVYGA 133 Query: 107 LSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 + P E + L IY +K A E +Y + Y + T + ++++G Sbjct: 134 NTEMPFFETQKADTQLTIYAATKKANESMGHAYAHLYDLPTTMFRFFTVYG 184 >gi|332751902|gb|EGJ82297.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2747-71] gi|332764370|gb|EGJ94605.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2930-71] Length = 355 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|300939995|ref|ZP_07154622.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] gi|300455169|gb|EFK18662.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 21-1] Length = 355 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARTYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|296447931|ref|ZP_06889840.1| dTDP-glucose 4,6-dehydratase [Methylosinus trichosporium OB3b] gi|296254568|gb|EFH01686.1| dTDP-glucose 4,6-dehydratase [Methylosinus trichosporium OB3b] Length = 365 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIG 92 A+ F PD++++ AA + VD++ D P N G + AA + Sbjct: 66 AAAMQEFQPDIVMHLAAESHVDRSIDGPAAFIHTNVVGTFTMLDAALEYWRGLDSERAAA 125 Query: 93 IPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ISTD VF L T + E +P +P + Y SK + ++ Y Sbjct: 126 FRFLHISTDEVFGALGATGLFREDTPYSPNSPYSASKAGSDHLARAWRETY 176 >gi|260773843|ref|ZP_05882758.1| UDP-glucose 4-epimerase [Vibrio metschnikovii CIP 69.14] gi|260610804|gb|EEX36008.1| UDP-glucose 4-epimerase [Vibrio metschnikovii CIP 69.14] Length = 341 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ S + +I+ A AV ++ +P + N G + A +G+ Sbjct: 58 DIRDKARLMSIMAEHKIESVIHFAGLKAVGESVQKPLEYYDNNVNGTLVLVSAMREVGVK 117 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 I+ S+ V+ + PI E PT+ N YG+SKL EE Sbjct: 118 SLIFSSSATVYGDPASVPITEQFPTSATNPYGRSKLMVEE 157 >gi|251798141|ref|YP_003012872.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247545767|gb|ACT02786.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 302 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 20/171 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-----------GRPDIDL----LKPKDFASF 45 MK LV G G I L+ VQ ++ V P+ L + + Sbjct: 1 MKALVTGGAGFIGSHLTDALVQSGAVVHVIDNLSTGFIHNVHPEAVLHELDINSDEALQI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PD++ + AA V + +P +N G + A + ++ ST V+ Sbjct: 61 IKQVKPDIVFHMAAQVDVQCSVADPAFDSLVNIVGTIRLMMACRQAEVGKLVFSSTSAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVY 151 ++ E + T P++ YG SKL GE + Y Y ILR + VY Sbjct: 121 GDANKERNSEDAVTAPISYYGLSKLTGENYIRLFHKMYGLPYTILRYSNVY 171 >gi|289678440|ref|ZP_06499330.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae FF5] Length = 366 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIP 94 F P +++ AA + VD++ PE N G + +A AD Sbjct: 67 LFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETADKTAFR 126 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 127 FLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTY 176 >gi|289706571|ref|ZP_06502921.1| UDP-glucose 4-epimerase [Micrococcus luteus SK58] gi|289556706|gb|EFD50047.1| UDP-glucose 4-epimerase [Micrococcus luteus SK58] Length = 351 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ +P+D+ F P +++ A + ++ P + +N G A+A+AA + G Sbjct: 63 DIRRPEDYRGALADFGPAALVHFAGLKSPTESMTRPAAYYDVNVGGTAAVAEAALAAGAR 122 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + + S+ V+ + P+ E + T+P++ YG SKL E+ Sbjct: 123 TVLFSSSATVYGDRAPVPVAEDAATDPVSPYGHSKLMAEQ 162 >gi|227538820|ref|ZP_03968869.1| possible capsular polysaccharide biosynthesis protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241329|gb|EEI91344.1| possible capsular polysaccharide biosynthesis protein [Sphingobacterium spiritivorum ATCC 33300] Length = 638 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 15/99 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 + F +F P V+ + AAY V E+ P N G +A A G+ +++STD Sbjct: 358 NLFDTFKPHVVYHAAAYKHVPMMENHPIEGVRTNVLGTFNLANLAVDFGVDKFVFVSTD- 416 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP NI G +K E V S N+ Sbjct: 417 -------------KAVNPTNIMGATKRIAEIYVQSLNNH 442 >gi|226304813|ref|YP_002764771.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis PR4] gi|226183928|dbj|BAH32032.1| GDP-mannose 4,6-dehydratase [Rhodococcus erythropolis PR4] Length = 343 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 14/129 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N AA + V + DEPE + G+ + +A G+ Sbjct: 63 DLSDGARLVTLLAQIKPDEVYNLAAQSHVRVSFDEPEHTGNTTGVGSIRLLEAVRMAGLD 122 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVY 151 C Y ++ G + P +E +P P + YG + KV SY T NY R A Y Sbjct: 123 CRFYQASSSEMFGATPPPQNEETPFYPRSPYGAA------KVYSYWITKNY---REA--Y 171 Query: 152 SIFGSNFLL 160 IF N +L Sbjct: 172 GIFAVNGIL 180 >gi|166713453|ref|ZP_02244660.1| dTDP-glucose 4,6-dehydratase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 351 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIG 92 A PD ++N AA + VD++ + P N G A+ +A A S Sbjct: 66 ARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPTARSDA 125 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|237756168|ref|ZP_04584737.1| UDP-glucose 4-epimerase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691675|gb|EEP60714.1| UDP-glucose 4-epimerase [Sulfurihydrogenibium yellowstonense SS-5] Length = 340 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE---EKVASYTN-NYVILR 146 I+ ST V+ P+ E +PT P+N YG+SKL E V ++T Y+ILR Sbjct: 126 IFSSTAAVYGQPDEIPVKETTPTQPINPYGRSKLMSETVLNDVGAHTEFKYIILR 180 >gi|197287133|ref|YP_002153005.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis HI4320] gi|194684620|emb|CAR46515.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis HI4320] Length = 357 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ S F + PD++++ AA + VD++ D P N G + +AA Sbjct: 60 VDICDRAALDSLFAQYQPDIVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARHFWS 119 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 120 VLPEDKKAAFRFHHISTDEVYGDLEGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 179 Query: 142 Y 142 Y Sbjct: 180 Y 180 >gi|50310879|ref|XP_455462.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|52788234|sp|P09609|GAL10_KLULA RecName: Full=Bifunctional protein GAL10; Includes: RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; Includes: RecName: Full=Aldose 1-epimerase; AltName: Full=Galactose mutarotase gi|49644598|emb|CAG98170.1| KLLA0F08415p [Kluyveromyces lactis] Length = 688 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 8/138 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 KC+V+ N + +S++ M + + I+ + D+ L+P F + D +++ A Sbjct: 30 KCIVVDNLSNSSYESVARMELLTGQEIKFAKIDLCELEP--LNKLFDDYKIDSVLHFAGL 87 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR----TPIDEF 115 AV ++ P + N G + + S + ++ S+ V+ +R PI E Sbjct: 88 KAVGESTQIPLTYYFNNIVGTINLLECMKSHDVKKLVFSSSATVYGDATRFENMIPIPET 147 Query: 116 SPTNPLNIYGKSKLAGEE 133 PT P N YGK+KL E+ Sbjct: 148 CPTGPTNPYGKTKLTIED 165 >gi|226365216|ref|YP_002782999.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus opacus B4] gi|226243706|dbj|BAH54054.1| NAD-dependent epimerase/dehydratase family protein [Rhodococcus opacus B4] Length = 346 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 38/221 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--------- 51 M+ L+ G+ G + + V +R D+ L FA L +P Sbjct: 1 MRVLLTGHQGYLGSVM-------VPALRAAGHDVVGLDSGLFADCLLGPAPADPPSVDVD 53 Query: 52 ------------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 D +I+ AA + P++ ++IN + +A A G+ +Y Sbjct: 54 LRDVTEAHLAGFDAVIHLAALSNDPLGSLAPDVTYAINHHASVRLANIAKDAGVKRFLYA 113 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYS--- 152 ST V+ + E +P PL Y +SK+ E+ VA ++ V LR A + Sbjct: 114 STCSVYGSAGEDLVTESAPLRPLTPYAESKVRVEDDVAGIADSGFSPVFLRNATAFGFSP 173 Query: 153 -IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI 192 + L +++ +A + V+ D GTP L AR I Sbjct: 174 RLRADIVLNNLVGVATLTGTVRVLSD--GTPWRPLVHARDI 212 >gi|218701298|ref|YP_002408927.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI39] gi|218371284|emb|CAR19118.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI39] Length = 355 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARTYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|170017858|ref|YP_001728777.1| UDP-glucose 4-epimerase [Leuconostoc citreum KM20] gi|169804715|gb|ACA83333.1| UDP-glucose 4-epimerase [Leuconostoc citreum KM20] Length = 330 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 21/155 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ ++ Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVEAGREVVVVDALFTGHRDAVNPAAKFYQVDIRDKAALSA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSIGIPCIYISTD 101 F + + +++ AA++ V ++ P F N G + KA D I ++ ST Sbjct: 61 VFEQENIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKAHDVKQI--VFSSTA 118 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + PI E P NP+N YG+SKL E+ +A Sbjct: 119 ATYGNPVNIPIKETDPQNPINPYGESKLMMEKIMA 153 >gi|86357005|ref|YP_468897.1| UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] gi|86281107|gb|ABC90170.1| probable UDP-glucose 4-epimerase protein [Rhizobium etli CFN 42] Length = 323 Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AED P +AF + AEG + +AA G+ + ++ GL+ + Sbjct: 75 DIVFHQAAIRITQCAED-PRLAFDVLAEGTFNVLEAAVKAGVSKVVAASSASVLGLAESF 133 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 P E P N IYG +K E + S+ YV LR VY Sbjct: 134 PTTEAHHPYNNRTIYGAAKTFNEGLLRSFAEMYGLRYVALRYFNVY 179 >gi|330975553|gb|EGH75619.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 366 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIP 94 F P +++ AA + VD++ PE N G + +A AD Sbjct: 67 LFTEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETADKAAFR 126 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 127 FLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTY 176 >gi|196249423|ref|ZP_03148121.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] gi|196211180|gb|EDY05941.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] Length = 337 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F + +++ A AV ++ P + N G + + D + Sbjct: 58 DLLDYEAIDHLFQEHDIEAVMHFAGLKAVGESVQMPLRYYHNNITGTLNLCRVMDKHNVK 117 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ R PIDE P + N YG++KL EE Sbjct: 118 KMVFSSSATVYGNPERVPIDETFPLSATNPYGRTKLMIEE 157 >gi|170683610|ref|YP_001746107.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SMS-3-5] gi|170521328|gb|ACB19506.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SMS-3-5] Length = 355 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARTYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|163740038|ref|ZP_02147442.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] gi|161386669|gb|EDQ11034.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis BS107] Length = 336 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 3/123 (2%) Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 L P F + PD +I+ AA V + D P N G + +AA + Sbjct: 63 LEDPDRLMGLFATHKPDAVIHLAAQAGVRHSIDAPRDYLEANLIGTFELLEAARAHPPAH 122 Query: 96 IYI-STDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYS 152 + I ST + ++ P DE + ++ Y +K AGE SY + Y + T + ++ Sbjct: 123 MLIASTSSAYGANTQMPFDERQQADHQMSFYAATKKAGETMAHSYAHLYGLPTTMFRFFT 182 Query: 153 IFG 155 ++G Sbjct: 183 VYG 185 >gi|163743523|ref|ZP_02150901.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis 2.10] gi|161383226|gb|EDQ07617.1| NAD-dependent epimerase/dehydratase [Phaeobacter gallaeciensis 2.10] Length = 336 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 3/123 (2%) Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 L P F + PD +I+ AA V + D P N G + +AA + Sbjct: 63 LEDPDRLMGLFATHKPDAVIHLAAQAGVRHSIDAPRDYLEANLIGTFELLEAARAHPPAH 122 Query: 96 IYI-STDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYS 152 + I ST + ++ P DE + ++ Y +K AGE SY + Y + T + ++ Sbjct: 123 MLIASTSSAYGANTQMPFDERQQADHQMSFYAATKKAGETMAHSYAHLYGLPTTMFRFFT 182 Query: 153 IFG 155 ++G Sbjct: 183 VYG 185 >gi|311896703|dbj|BAJ29111.1| putative UDP-glucose 4-epimerase [Kitasatospora setae KM-6054] Length = 324 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 I++ AA V ++ EP + N EG + +AA + G+ I +S+ G+ + Sbjct: 70 ILHIAAKKQVGESVSEPLHYYQENVEGLRLVLEAAVAGGVRRILLSSSAAVYGMPDVDLV 129 Query: 113 DEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 E +P P+N YG++KL GE +Y + V LR Sbjct: 130 TESTPCAPINPYGETKLVGEWLLNASATAYGMSTVALR 167 >gi|218707425|ref|YP_002414944.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UMN026] gi|293407418|ref|ZP_06651338.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1412] gi|298383158|ref|ZP_06992752.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1302] gi|300900666|ref|ZP_07118820.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 198-1] gi|218434522|emb|CAR15448.1| dTDP-glucose 4,6-dehydratase [Escherichia coli UMN026] gi|284923893|emb|CBG36992.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 042] gi|291425529|gb|EFE98567.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1412] gi|298276394|gb|EFI17913.1| dTDP-glucose 4,6 dehydratase [Escherichia coli FVEC1302] gi|300355844|gb|EFJ71714.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 198-1] Length = 355 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|254480929|ref|ZP_05094175.1| GDP-mannose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] gi|214038724|gb|EEB79385.1| GDP-mannose 4,6-dehydratase [marine gamma proteobacterium HTCC2148] Length = 347 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL + PD I N AA + V + +EPE ++ G I +A +G+ Sbjct: 36 DLSDTSNITRIIQQVQPDEIYNLAAQSHVAVSFEEPEYTADVDGIGTLRILEAVRLLGLT 95 Query: 94 ---PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P ST ++ + TP E +P +P + G +KL +Y +Y Sbjct: 96 EKTPIYQASTSELYGLVQETPQTERTPFHPRSPCGVAKLYAYWITVNYRESY 147 >gi|212533307|ref|XP_002146810.1| UDP-glucose 4-epimerase [Penicillium marneffei ATCC 18224] gi|210072174|gb|EEA26263.1| UDP-glucose 4-epimerase [Penicillium marneffei ATCC 18224] Length = 371 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDI---DLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S+ + +E+I +P+ D+ P F F ++ PD+ +I+ AA AV ++ ++P Sbjct: 40 SAEVINRIELICGKKPEFVQADITDPTAFDKVFAAY-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G + ++ + ++ S+ V+ +R PI E P P N YG Sbjct: 99 DYYLVNVYGTINLLRSMQKHNVYNIVFSSSATVYGDATRFPNMIPIPEDCPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K E + + N Sbjct: 159 TKFTVETAITDFIN 172 >gi|220924197|ref|YP_002499499.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219948804|gb|ACL59196.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 327 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 45 FFLSF--SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 F LS +++++ AA A+ + P N EG + +AA +G+ ++ ST Sbjct: 68 FVLSLVEGQEIVLHLAALIAIPYSYTAPRSYVRTNIEGTLNVLEAARRVGVERVVHTSTS 127 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ PIDE P + Y SK+ ++ SY ++ Sbjct: 128 EVYGTAQYVPIDEVHPLQGQSPYSASKIGADKVAESYYRSF 168 >gi|163790716|ref|ZP_02185143.1| UDP-glucose 4-epimerase (galactowaldenases) [Carnobacterium sp. AT7] gi|159874017|gb|EDP68094.1| UDP-glucose 4-epimerase (galactowaldenases) [Carnobacterium sp. AT7] Length = 284 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 13/156 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G N I L++ ++ E V + + D K DF+ + +V+++ A Sbjct: 4 KILITGKNSYIGNQLAAWLNKEPEKYEVIKECVRDDKWKEIDFSIY------EVVVHVAG 57 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPT 118 +++ +I + +N + + IAK A G+ +++ST V+ G + +++ + Sbjct: 58 VAHIEETTANKKIYYEVNRDLSYEIAKKAKKYGVKLFVFLSTMSVY-GKTEGIVNKNTVA 116 Query: 119 NPLNIYGKSKLAGEEKVASYT-NNY--VILRTAWVY 151 +P YGKSKL E+ + S + NN+ ILR +Y Sbjct: 117 DPTTNYGKSKLEAEQLILSLSGNNFKIAILRPPMIY 152 >gi|90020381|ref|YP_526208.1| UDP-galactose 4-epimerase [Saccharophagus degradans 2-40] gi|89949981|gb|ABD79996.1| UDP-galactose 4-epimerase [Saccharophagus degradans 2-40] Length = 339 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 13/132 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F S+ +I+ A AV ++ + P + N G + + D + Sbjct: 57 VDICDKAALSDVFASYKVSSVIHFAGLKAVGESCEMPLEYYRNNVGGTVTLCEVMDEHSV 116 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 ++ S+ V+ + PI E PT N YG+SKL EE ILR V Sbjct: 117 HNLLFSSSATVYGDPASVPILESFPTGATNPYGRSKLIVEE----------ILRD--VCK 164 Query: 153 IFGSNFLLSMLR 164 I SN+ +S+LR Sbjct: 165 IPNSNWRISLLR 176 >gi|42519635|ref|NP_965565.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227889421|ref|ZP_04007226.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|268320008|ref|YP_003293664.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|41583924|gb|AAS09531.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227849899|gb|EEJ59985.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|262398383|emb|CAX67397.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|329667889|gb|AEB93837.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ +P + N G ++ +A + + + S+ G+ + Sbjct: 68 DAVMHFAAYSLVGESVKKPLKYYDNNVSGMISLLQAMEDAKVKYLVFSSSAATYGIPEKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +P NP+N YG++K+ E+ Sbjct: 128 PITEDTPLNPINPYGETKMMMEK 150 >gi|325272970|ref|ZP_08139287.1| UDP-glucose 4-epimerase [Pseudomonas sp. TJI-51] gi|324101905|gb|EGB99434.1| UDP-glucose 4-epimerase [Pseudomonas sp. TJI-51] Length = 325 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 11/153 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRP-------DIDLLKPKDFASFFLSFS 50 MKCLV+G G I + +V + + P +D+ F Sbjct: 1 MKCLVVGGAGYIGSHMVKHLQGAGHEVVVADLVSPGPGVQWAKLDIADEAALDVLFGVVH 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 D + + A++ V ++ P + N A+ +A + GI ++ S+ V+ Sbjct: 61 FDAVFHFASFIQVGESVSAPGKYYQNNVAATLALLQAMVNAGIKYLVFSSSAAVYGNPLY 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P+N YG SK E+ + + Y Sbjct: 121 VPIDEAHGKQPINPYGLSKWMVEQILEDFDRAY 153 >gi|331655472|ref|ZP_08356465.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M718] gi|331046793|gb|EGI18877.1| dTDP-glucose 4,6-dehydratase [Escherichia coli M718] Length = 355 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|302876882|ref|YP_003845515.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|307687567|ref|ZP_07630013.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|302579739|gb|ADL53751.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] Length = 329 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F S D +I+ AA + V ++ ++P ++ N GA + +A + + I S+ Sbjct: 62 FKENSIDAVIHFAANSLVGESMEKPLKYYNNNVYGAQKLLEAMIANDVKKIVFSSTAAVY 121 Query: 106 GLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 G +T P+ E TNP N YG++KLA E+ Sbjct: 122 GEPKTVPVVESLDTNPTNTYGETKLAMEK 150 >gi|300776405|ref|ZP_07086263.1| possible nucleoside-diphosphate sugar epimerase [Chryseobacterium gleum ATCC 35910] gi|300501915|gb|EFK33055.1| possible nucleoside-diphosphate sugar epimerase [Chryseobacterium gleum ATCC 35910] Length = 642 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 18/118 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 S F +++ ++ + AAY V E+ P A +N G+ +AK + + + +STD Sbjct: 372 SLFQTYNFSMVYHAAAYKHVPLVEENPHEAIFVNILGSKIVAKLSSKYKVNRFVMVSTD- 430 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFGSN 157 NP N+ G SK A E V S N N T ++ GSN Sbjct: 431 -------------KAVNPTNVMGASKRAAELFVQSLQNVEGNVTKFITTRFGNVLGSN 475 >gi|189502421|ref|YP_001958138.1| hypothetical protein Aasi_1064 [Candidatus Amoebophilus asiaticus 5a2] gi|189497862|gb|ACE06409.1| hypothetical protein Aasi_1064 [Candidatus Amoebophilus asiaticus 5a2] Length = 337 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 14/114 (12%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------------D 89 +S F F II+ AA + VD++ +P + N EG + +AA D Sbjct: 68 SSLFRQFDFQGIIHLAAESHVDRSIQDPTLFIKTNIEGTFVLLEAARLHWMQKPGEYKQD 127 Query: 90 SIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I +++STD V+ L E +P P N Y +K + V SY + Y Sbjct: 128 YIESRFLHVSTDEVYGSLGPAGFFTEETPYAPNNPYSATKAGSDLLVRSYVHTY 181 >gi|113374877|gb|ABI34795.1| UDP-glucose 4'-epimerase [Thermus aquaticus] Length = 311 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 22/177 (12%) Query: 1 MKCLVIGNNG----QIAQSL----------SSMCVQDVEIIRVGRP--DIDLLKPKDFAS 44 M+ LV G G IA++L ++ E + G P +DL + Sbjct: 1 MRVLVTGGAGFIGSHIAEALLREGLEVAVLDNLSTGKRENVPPGVPFYQVDLRDGEGVER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P + + AA +V + ++P + F++N G + +A G+ ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACRRHGVEKLVFASTGGA 120 Query: 104 FDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 G +E P P + Y SK A E +++Y NY + WV +G+ + Sbjct: 121 IYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGL---KWVSLRYGNVY 174 >gi|291615704|ref|YP_003518446.1| RffG [Pantoea ananatis LMG 20103] gi|291150734|gb|ADD75318.1| RffG [Pantoea ananatis LMG 20103] Length = 328 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ CV + + R +D+ S F PD +++ AA T Sbjct: 1 MVVVDKLSYAGNLSSLACVTENPRFKFER--VDICDRAALDSVFSQHQPDCVMHLAAETH 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI----------YISTDYVFDGLSRTP- 111 VD++ D P N G + +AA +ISTD VF L T Sbjct: 59 VDRSIDGPIAFIETNIVGTYQLLEAARHYWNALTGDRKKNFLFHHISTDEVFGDLDDTSA 118 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y +K + + V ++ Y Sbjct: 119 FFTEDTPYAPSSPYSATKASSDHLVRAWLRTY 150 >gi|258562390|gb|ACV81911.1| UDP-N-acetylglucosamine 4-epimerase [Eimeria tenella] Length = 194 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 +S+S Q + ++R +DL F D +I+ AA +V ++ P + Sbjct: 35 RSVSRASQQQLRVLR-----LDLRDKDKVMRLFKEEKIDAVIHYAALKSVGESVQMPLMY 89 Query: 74 FSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 + N G + +A ++ G+ ++ S+ V+ + I+E P P N YG SK Sbjct: 90 YENNVGGTCNLLQAMEASGVKTLVFSSSATVYAAKPKMQINEKDPLGPSNPYGHSK 145 >gi|159029613|emb|CAO90274.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 332 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + F S +++ AA+ AV ++ EP I + N G+ + +A + + S+ Sbjct: 67 NLFASRDIAAVMHFAAFIAVGESVQEPAIYYQNNVSGSLTLLQAMIAADVKKFVFSSTCA 126 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SI 153 G+ + P+ E P +PL+ Y SK E+ + + Y + A+ Y + Sbjct: 127 IYGMPKEIPMTENHPHHPLSPYAASKEMVEQILRDFDRAYGLKSVAFRYFNASGADPSGL 186 Query: 154 FGSNFL-------LSMLRLAKERREISVVCDQFGTP 182 G + L++L K+R +S+ + TP Sbjct: 187 LGEDHQPETHLIPLALLTALKKRDSLSIFGTDYDTP 222 >gi|159901331|ref|YP_001547578.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159894370|gb|ABX07450.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 342 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 14/145 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV--EIIRVGR---PDI-----DLLKPKDFASFFLSFSP 51 + L+ G NG + Q L Q E+ +GR P + DLL A+ + +P Sbjct: 23 RALITGANGFVGQHLVRYLQQATTWELWALGREAHPQLPTVLADLLDRSAVATAVANAAP 82 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL--- 107 D++++ AA +A+ ++ +P FSIN G + +A S + P + + G+ Sbjct: 83 DLVVHLAAQSAIPQSFRDPAGTFSINVLGQLHLFEAIKSAQLDPIVLVVGSNAMYGMAHR 142 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGE 132 S P DE + P + Y SK A + Sbjct: 143 SGLPADENTMLCPADPYAVSKAAQD 167 >gi|56752002|ref|YP_172703.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 6301] gi|81300909|ref|YP_401117.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 7942] gi|56686961|dbj|BAD80183.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 6301] gi|81169790|gb|ABB58130.1| dTDP-glucose 4,6-dehydratase [Synechococcus elongatus PCC 7942] Length = 357 Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 +DLL F ++ P +++ AA + VD++ D P N G + +AA Sbjct: 58 VDLLDEAALTRIFQTYQPTAVMHLAAESHVDRSIDSPRPFIESNILGTFNLLEAARRYWQ 117 Query: 89 -----DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +ISTD V+ L T + E + +P + Y SK + + V ++ + Y Sbjct: 118 ELSESEQQTFRFHHISTDEVYGSLGETGLFTEATRYDPRSPYSASKASSDHLVRAWHHTY 177 >gi|330899785|gb|EGH31204.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 366 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIP 94 F P +++ AA + VD++ PE N G + +AA D Sbjct: 67 LFTEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETTDKAAFR 126 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 127 FLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTY 176 >gi|110807522|ref|YP_691042.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 5 str. 8401] gi|110617070|gb|ABF05737.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 5 str. 8401] gi|332750987|gb|EGJ81392.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 4343-70] gi|332996849|gb|EGK16469.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri VA-6] gi|332997925|gb|EGK17532.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-218] gi|332998270|gb|EGK17872.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-272] gi|333013810|gb|EGK33173.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-227] Length = 355 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|71280771|ref|YP_268881.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Colwellia psychrerythraea 34H] gi|71146511|gb|AAZ26984.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Colwellia psychrerythraea 34H] Length = 400 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 7/90 (7%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV-FDGL 107 S D++ + AA V ++D+ F N +GA I +A + I +Y ST V F G+ Sbjct: 106 SCDLVFHVAAKAGVWGSKDD---YFKPNVQGAKNIIQACQELAITRLVYTSTPSVTFAGV 162 Query: 108 SRTPIDEFSP--TNPLNIYGKSKLAGEEKV 135 IDE P N LN YG+SK E+ V Sbjct: 163 DEAGIDESQPYADNFLNFYGESKALAEQLV 192 >gi|83944594|ref|ZP_00957044.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. EE-36] gi|83844571|gb|EAP82458.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. EE-36] Length = 345 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 9/106 (8%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----DSIGIPCI---Y 97 F + PD +++ AA + VD++ D P N G + +AA D+ + + Sbjct: 68 FEAHKPDAVMHLAAESHVDRSIDGPGAFIQTNVTGTYTLLEAARAYWQDAGKLGSFRFHH 127 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L T E +P +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVYGSLGSTGQFTEETPYDPRSPYSASKAASDHLVRAWGETY 173 >gi|281603178|gb|ADA76162.1| DTDP-glucose 4,6-dehydratase [Shigella flexneri 2002017] Length = 338 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 35 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 94 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 95 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 154 Query: 136 ASYTNNY 142 ++ Y Sbjct: 155 RAWLRTY 161 >gi|260777670|ref|ZP_05886563.1| UDP-glucose 4-epimerase [Vibrio coralliilyticus ATCC BAA-450] gi|260605683|gb|EEX31968.1| UDP-glucose 4-epimerase [Vibrio coralliilyticus ATCC BAA-450] Length = 338 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 + +I+ A AV ++ ++P + N G + A +G+ I + S+ V+ + Sbjct: 75 NAVIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMREVGVKSIVFSSSATVYGDPASV 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 PI E PT+ N YG+SKL EE + + Sbjct: 135 PITEDFPTSATNPYGRSKLMVEECLTDF 162 >gi|302902565|ref|XP_003048672.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729606|gb|EEU42959.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 371 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 17 SSMCVQDVEIIRVGRP---DIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEI 72 S + + +E++ RP +D+ K F D +I+ AA AV ++ + P Sbjct: 40 SEVALDRIELLAGRRPAFYKLDVTDEKALDEVFQKHPAIDSVIHFAALKAVGESGEIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ A+ +A + + I + S+ V+ +R PI E P P N YG++ Sbjct: 100 YYRVNVGGSIALLRAMERNNVNNIVFSSSATVYGDATRFPNMIPIPEHCPIGPTNTYGRT 159 Query: 128 KLAGEEKVASYTN 140 K E+ + + N Sbjct: 160 KSMIEDVITDFIN 172 >gi|150008452|ref|YP_001303195.1| putative nucleotide-diphosphate sugar epimerase [Parabacteroides distasonis ATCC 8503] gi|149936876|gb|ABR43573.1| putative nucleotide-diphosphate sugar epimerase [Parabacteroides distasonis ATCC 8503] Length = 637 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 19/127 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ + F PD + + AAY V ED PE + N +G IA + G Sbjct: 356 DICVRERMEELFEEHRPDYVFHAAAYKHVPMMEDNPEESVRNNVDGTRVIADLSVKYGTR 415 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAW 149 + +STD NP N+ G SK E V S + V RT + Sbjct: 416 KFVMVSTD--------------KAVNPTNVMGCSKRICEIYVQSLDQAIKDGKVRGRTQF 461 Query: 150 VYSIFGS 156 V + FG+ Sbjct: 462 VTTRFGN 468 >gi|49176411|ref|YP_026255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. MG1655] gi|89110229|ref|AP_004009.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. W3110] gi|170083275|ref|YP_001732595.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. DH10B] gi|188493730|ref|ZP_03001000.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 53638] gi|238902868|ref|YP_002928664.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BW2952] gi|256026137|ref|ZP_05440002.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 4_1_40B] gi|293417254|ref|ZP_06659879.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] gi|293468106|ref|ZP_06664518.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B088] gi|300947353|ref|ZP_07161550.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|300955209|ref|ZP_07167604.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 175-1] gi|301029001|ref|ZP_07192158.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 196-1] gi|301646146|ref|ZP_07246045.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|307140489|ref|ZP_07499845.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] gi|307313635|ref|ZP_07593255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|331644522|ref|ZP_08345642.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] gi|55977781|sp|P27830|RMLB2_ECOLI RecName: Full=dTDP-glucose 4,6-dehydratase 2 gi|48994969|gb|AAT48213.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. MG1655] gi|85676260|dbj|BAE77510.1| dTDP-glucose 4,6-dehydratase [Escherichia coli str. K12 substr. W3110] gi|169891110|gb|ACB04817.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli str. K-12 substr. DH10B] gi|188488929|gb|EDU64032.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 53638] gi|238861015|gb|ACR63013.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BW2952] gi|260451366|gb|ACX41788.1| dTDP-glucose 4,6-dehydratase [Escherichia coli DH1] gi|291321484|gb|EFE60922.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B088] gi|291431022|gb|EFF04017.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B185] gi|299878044|gb|EFI86255.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 196-1] gi|300317863|gb|EFJ67647.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 175-1] gi|300453039|gb|EFK16659.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 116-1] gi|301075615|gb|EFK90421.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|306906616|gb|EFN37128.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|315063084|gb|ADT77411.1| dTDP-glucose 4,6-dehydratase [Escherichia coli W] gi|315138367|dbj|BAJ45526.1| dTDP-glucose 4,6-dehydratase [Escherichia coli DH1] gi|315618513|gb|EFU99099.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 3431] gi|323380852|gb|ADX53120.1| dTDP-glucose 4,6-dehydratase [Escherichia coli KO11] gi|323938927|gb|EGB35146.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E482] gi|331036194|gb|EGI08429.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H736] Length = 355 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|42520464|ref|NP_966379.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|58696645|ref|ZP_00372199.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|99034554|ref|ZP_01314526.1| hypothetical protein Wendoof_01000664 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225630351|ref|YP_002727142.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia sp. wRi] gi|225630745|ref|YP_002727536.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia sp. wRi] gi|42410203|gb|AAS14313.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila melanogaster] gi|58537169|gb|EAL60271.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592332|gb|ACN95351.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia sp. wRi] gi|225592726|gb|ACN95745.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia sp. wRi] Length = 319 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIP-CIYISTDYVFDGLSRTP 111 +I+ AA + V E PE+ +N +G + S+ P IY S+ V+ P Sbjct: 56 VIHLAAISRVIHGELYPELCQKVNVDGTIQFLEFCKSLPNKPWFIYASSREVYGEQKELP 115 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 + E + NP+N Y K K EE+V + N ILR + VY Sbjct: 116 VAESASINPINNYAKGKAFIEEQVINLKGSNFNVAILRFSNVY 158 >gi|306820761|ref|ZP_07454387.1| dTDP-glucose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551210|gb|EFM39175.1| dTDP-glucose 4,6-dehydratase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 348 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 16/120 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + F ++ D ++N AA + VD++ + PEI N G + + A Sbjct: 59 DICDKELVGEIFTKYNIDTVVNFAAESHVDRSIENPEIFLLTNILGTQNLLEQAKKHWKI 118 Query: 92 ------------GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASY 138 G+ + +STD V+ L + + E +P +P + Y SK + V +Y Sbjct: 119 KPDDKYSREYKEGVKFLQVSTDEVYGALGKEGMFTELTPLSPNSPYSSSKAGADMLVRAY 178 >gi|296445616|ref|ZP_06887571.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] gi|296256861|gb|EFH03933.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium OB3b] Length = 350 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Query: 77 NAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 N +G +A+AA G+ +++S++ ++ P+ E P+ IYGKSK GE+ + Sbjct: 94 NVDGTRNVAEAAARHGVRALVFLSSNCLWAENMGRPVREDDEPAPVEIYGKSKWEGEKIL 153 Query: 136 ASYTN--NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 A Y + N V +R + L + E R++ VV Sbjct: 154 AGYADRLNVVSIRCPTIIDEGRLGLLAILFEFIAEGRKVWVV 195 >gi|254462677|ref|ZP_05076093.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2083] gi|206679266|gb|EDZ43753.1| dTDP-glucose 4,6-dehydratase [Rhodobacteraceae bacterium HTCC2083] Length = 329 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----GIPCIY----ISTD 101 PD I++ AA + VD++ D P N G + + A S G P + +STD Sbjct: 56 QPDAIMHLAAESHVDRSIDGPGAFIETNITGTYMLLEVARSYWSAQGKPDTFRFHHVSTD 115 Query: 102 YVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 VF L T + E +P +P + Y SK A + V ++ Y Sbjct: 116 EVFGSLGATGMFTEDTPYDPRSPYSASKAASDHLVRAWGETY 157 >gi|34499490|ref|NP_903705.1| nucleotide sugar dehydratase [Chromobacterium violaceum ATCC 12472] gi|34105340|gb|AAQ61695.1| probable nucleotide sugar dehydratase [Chromobacterium violaceum ATCC 12472] Length = 307 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA A+ + P+ N +G I +AA G+ I+ ST V+ Sbjct: 54 DTVYHLAALIAIPYSYVAPDSYVDTNVKGTLNICQAALDNGVSRVIHTSTSEVYGTAQYV 113 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 PIDE P P + Y SK+ + S+ N + + L A ++ +G Sbjct: 114 PIDEKHPLQPQSPYSASKIGADAMAMSFYNAFDLPLTIARPFNTYG 159 >gi|6729762|pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli gi|6729763|pdb|1BXK|B Chain B, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|285019457|ref|YP_003377168.1| dtdp-glucose 4,6-dehydratase [Xanthomonas albilineans GPE PC73] gi|283474675|emb|CBA17174.1| probable dtdp-glucose 4,6-dehydratase protein [Xanthomonas albilineans] Length = 351 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----------G 92 + PD ++N AA + VD++ D P N G + +A G Sbjct: 66 SRLLTEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPDGRRQG 125 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|119873257|ref|YP_931264.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] gi|119674665|gb|ABL88921.1| NAD-dependent epimerase/dehydratase [Pyrobaculum islandicum DSM 4184] Length = 301 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 13/154 (8%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS 90 R I LK D+A + S D++ + A V EP + F N + + A Sbjct: 46 RLHIADLKDPDWA---VGVSADIVFHFAGNPEV---RAEPRVHFEENVVATFNVLEWARL 99 Query: 91 IGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 G+ ++ S+ V+ P E P P+++YG +K AGE A+Y Y + A Sbjct: 100 SGVRTVVFASSSTVYGDAKVLPTPEDYPLEPISVYGAAKAAGETMCATYARLYGVRCLAL 159 Query: 150 VYS-IFGSNFLLS-----MLRLAKERREISVVCD 177 Y+ + G +++L K E+ V+ D Sbjct: 160 RYANVVGPRMRHGAIYDFVMKLRKRPEELEVLGD 193 >gi|41407849|ref|NP_960685.1| hypothetical protein MAP1751 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396203|gb|AAS04068.1| hypothetical protein MAP_1751 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 389 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + PD +++ AA + + +P++A +N G + A ++ P Sbjct: 62 DLLDAEAVRDLVTAHQPDAVVHLAAVVS-PLSYRKPDLARRVNVGGTENLLAACTALPRP 120 Query: 95 CIYISTDYVFDGLSRTP------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++ SR P I +P NP++ YG+ K+ E + + Y + R Sbjct: 121 PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG 180 Query: 149 WV-----YSIFGSNFLLSMLRLAKERREISV 174 + ++ ++LL M + + R +V Sbjct: 181 GIISPDTHASINGDYLLLMRSMPSDNRMHAV 211 >gi|323340989|ref|ZP_08081238.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ruminis ATCC 25644] gi|323091651|gb|EFZ34274.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ruminis ATCC 25644] Length = 339 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ID+ + F PD+++N AA + VD++ + P++ N G + A GI Sbjct: 58 IDICDREAIYKLFEEEHPDMVVNFAAESHVDRSIENPQLFLETNIMGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ P++ Sbjct: 118 KRYHQVSTDEVYGDL---PLDRPDLFFTEETPIH 148 >gi|302542503|ref|ZP_07294845.1| dTDP-glucose 4,6-dehydratase [Streptomyces hygroscopicus ATCC 53653] gi|302460121|gb|EFL23214.1| dTDP-glucose 4,6-dehydratase [Streptomyces himastatinicus ATCC 53653] Length = 327 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA + VD++ ++P N G + + G+ ++ISTD V+ + R Sbjct: 76 DAVVNFAAESHVDRSIEDPSAFVRTNVLGTQTLLEGCLLSGVERVVHISTDEVYGSIERG 135 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 E P P + Y SK +G+ SY Sbjct: 136 AWTEEWPLAPNSPYAASKASGDLIARSY 163 >gi|288941374|ref|YP_003443614.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] gi|288896746|gb|ADC62582.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] Length = 335 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 24/157 (15%) Query: 1 MKCLVIGNNGQIAQS--------------LSSMCVQDVEIIR---------VGRPDIDLL 37 M+ LV G G I + ++C E +R VG ++DL Sbjct: 1 MRVLVTGGAGYIGSHTCLELLQAGIHVVVIDNLCNSREESLRRVGEITGQAVGFFEVDLR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 + F D +I+ A AV ++ +P + N +G + + G+ + Sbjct: 61 DREALGEIFSQGRFDAVIHFAGLKAVGESVAQPLEYYDNNVQGTLTLCQVMAEAGVRNLV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + S+ V+ + PI E P N YG+SKL EE Sbjct: 121 FSSSATVYGDPTSVPIREDFPVGATNPYGRSKLFIEE 157 >gi|229050943|ref|ZP_04194493.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus AH676] gi|228722401|gb|EEL73796.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus AH676] Length = 593 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 18/108 (16%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 P V+ + AA+ V E PE A N G +A+AAD+ GI + +STD Sbjct: 343 KPFVVYHAAAHKHVPLMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTD------- 395 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K E V +I +T +V FG+ Sbjct: 396 -------KAVNPTNVMGATKRVAEMVVQHMA---IISQTRFVAVRFGN 433 >gi|259490705|ref|NP_001159236.1| hypothetical protein LOC100304323 [Zea mays] gi|223942915|gb|ACN25541.1| unknown [Zea mays] gi|223943137|gb|ACN25652.1| unknown [Zea mays] gi|224029891|gb|ACN34021.1| unknown [Zea mays] Length = 407 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K F + D +++ AA V ++ EP + I +A S G+ Sbjct: 123 DLGNQKSVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVQ 182 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 IY ST + + PI E +P P+N YGK+K E+ + ++N+ Sbjct: 183 TLIYSSTCATYGEPDKMPITEATPQFPINPYGKAKKMAEDIIIDFSNS 230 >gi|116332602|ref|YP_802319.1| nucleoside-diphosphate sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127469|gb|ABJ77561.1| Nucleoside-diphosphate sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 630 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 20/119 (16%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 +S F SP+V+ + AAY V E P A N G +A + G+ + ISTD Sbjct: 352 SSIFEKHSPEVVFHSAAYKHVPMMEVNPTEAVMNNVLGTKNVADISRLSGVERFVLISTD 411 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSN 157 NP+NI G SK A E + V+ T I T ++ GSN Sbjct: 412 --------------KAVNPVNIMGASKRAAELYLQHVSRETKTKFI--TVRFGNVLGSN 454 >gi|24115082|ref|NP_709592.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 301] gi|30064917|ref|NP_839088.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|24054348|gb|AAN45299.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 301] gi|30043178|gb|AAP18899.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|313647767|gb|EFS12214.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri 2a str. 2457T] gi|332751076|gb|EGJ81480.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-671] gi|333013595|gb|EGK32962.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri K-304] Length = 355 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|146277377|ref|YP_001167536.1| UDP-glucose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] gi|145555618|gb|ABP70231.1| UDP-galactose 4-epimerase [Rhodobacter sphaeroides ATCC 17025] Length = 330 Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PI 112 +I+ AA V ++ +P + N G + + + G+ I S+ G+ + PI Sbjct: 71 VIHFAASAYVGESMADPARYYDNNVGGMIGLVQGCRAAGVTRIVFSSSCATYGVPESLPI 130 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E +P P+N YG++KL GEE Sbjct: 131 RETTPQRPINPYGRTKLIGEE 151 >gi|297625068|ref|YP_003706502.1| GDP-mannose 4,6-dehydratase [Truepera radiovictrix DSM 17093] gi|297166248|gb|ADI15959.1| GDP-mannose 4,6-dehydratase [Truepera radiovictrix DSM 17093] Length = 327 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 2/112 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL + +PD + N AA + V + ++P + I G + +A ++ Sbjct: 57 DFDLADQGNMVRALEKHAPDEVYNLAAQSFVALSFEQPVMTGDITGVGVARLLEAIRTVN 116 Query: 93 IPCIY--ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ST +F + P +E +P P + YG +KL G +Y +Y Sbjct: 117 PETRFYQASTSEMFGKVQAVPQNETTPFYPRSPYGVAKLYGHWMTVNYRESY 168 >gi|121713508|ref|XP_001274365.1| UDP-glucose 4-epimerase [Aspergillus clavatus NRRL 1] gi|119402518|gb|EAW12939.1| UDP-glucose 4-epimerase [Aspergillus clavatus NRRL 1] Length = 371 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S + +E+I +P+ L D A F F PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEALNRIELICGKKPEFAQLDVTDEAGFDKVFEAHPDIDSVIHFAALKAVGESGEKPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N GA + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYMVNVYGAICLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTN 140 K+A E + N Sbjct: 160 KVAVETAITDVIN 172 >gi|18978160|ref|NP_579517.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] gi|18893965|gb|AAL81912.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] Length = 307 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D + + AA +V+++ +P +N G I KA I+ S+ V+ P Sbjct: 68 DYVFHEAAQISVEESVRDPIFTDEVNVIGTLNILKALSEGSGKIIFASSAAVYGENKNLP 127 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 + E P++ YG SKLAGE V + Y VILR VY Sbjct: 128 LKEDYLPKPISPYGVSKLAGEHYVRVFYELYGVPGVILRYFNVY 171 >gi|58699758|ref|ZP_00374403.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila ananassae] gi|58533726|gb|EAL58080.1| NAD-dependent epimerase/dehydratase family protein [Wolbachia endosymbiont of Drosophila ananassae] Length = 267 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIP-CIYISTDYVFDGLSRTP 111 +I+ AA + V E PE+ +N +G + S+ P IY S+ V+ P Sbjct: 56 VIHLAAISRVIHGELYPELCQKVNVDGTIQFLEFCKSLPNKPWFIYASSREVYGEQKELP 115 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVY 151 + E + NP+N Y K K EE+V + N ILR + VY Sbjct: 116 VAESASINPINNYAKGKAFIEEQVINLKGSNFNVAILRFSNVY 158 >gi|297156030|gb|ADI05742.1| putative UDP-glucose 4-epimerase [Streptomyces bingchenggensis BCW-1] Length = 328 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 6/122 (4%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 ++ ++ Q V +++ D +LL + FA ++ +++ AA V ++ ++P Sbjct: 33 LSSGVTERLPQGVRLVQGSTLDRELLD-RTFADLGVTG----VVHLAAKKQVGESVEQPL 87 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLA 130 + N G + +A + GI S+ G+ + E +P P+N YG++KLA Sbjct: 88 RYYRENVHGLTVLLEAVVAAGIGSFLFSSSAAVYGMPDVELVTEDTPCRPINPYGETKLA 147 Query: 131 GE 132 GE Sbjct: 148 GE 149 >gi|241895195|ref|ZP_04782491.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] gi|241871501|gb|EER75252.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] Length = 330 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--------------GRP--DIDLLKPKDFAS 44 M LV+G G I + + + D + V G P ++D+ + Sbjct: 1 MSVLVLGGAGYIGSHMVATLLADHRDVVVVDNLLTGHRASVPEGVPFYEVDIRDKAALSE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + + +++ AA + V ++ ++P F N G + + + I S+ Sbjct: 61 VFEKENIEQVVHFAASSIVPESVEKPLKYFDNNVYGMINLLEVMLDFDVKQIVFSSTAAT 120 Query: 105 DGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 G+++ PI E +P NP+N YG+SKL E + +Y +V LR Sbjct: 121 YGVAKENPIKETTPQNPINPYGESKLQMEHIMKWADQAYGLKWVALR 167 >gi|291285204|ref|YP_003502022.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|209753444|gb|ACI75029.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|290765077|gb|ADD59038.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. CB9615] gi|320660954|gb|EFX28397.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. USDA 5905] Length = 355 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNVLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|284030676|ref|YP_003380607.1| GDP-mannose 4,6-dehydratase [Kribbella flavida DSM 17836] gi|283809969|gb|ADB31808.1| GDP-mannose 4,6-dehydratase [Kribbella flavida DSM 17836] Length = 327 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + P+ + + AA + V + DEPE G + +A IG+ Sbjct: 63 DLTDGSRLVTLLAAIQPEEVYHLAAQSHVRVSFDEPEYTGDTTGMGTTRLLEAIRMIGLN 122 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 C Y ++ G S P +E +P P + YG +K+ G +Y Y Sbjct: 123 CRFYQASSSEMFGASPPPQNELTPFYPRSPYGAAKVYGYWMTRNYREAY 171 >gi|257054080|ref|YP_003131913.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256692843|gb|ACV13180.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 321 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGK 126 D P F N E + + D +G+ I + S+ V+ R ++F+P P++ YG Sbjct: 91 DAPREQFEANGEMTYNVLERMDDVGVESIAFTSSSTVYGEAPRPTPEDFAPLEPISEYGA 150 Query: 127 SKLAGEEKVASYTNNY 142 +KL+ E ++ Y +++ Sbjct: 151 AKLSEESLLSVYAHSH 166 >gi|118468303|ref|YP_889479.1| RmlD substrate binding domain-containing protein [Mycobacterium smegmatis str. MC2 155] gi|118169590|gb|ABK70486.1| RmlD substrate binding domain superfamily protein [Mycobacterium smegmatis str. MC2 155] Length = 359 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 9/98 (9%) Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP------IDEFSPTNPLNIY 124 E+A +N + ++ +AA++ P ++ V +R P + +P NP++IY Sbjct: 91 ELARKVNVDATESLLRAAEARATPPRFVLASSVAVYGTRNPHRITDMLTADTPVNPVDIY 150 Query: 125 GKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 G K+ E V + +++ILR V S S F + M Sbjct: 151 GAHKVEAENLVRASRLDWLILRLGGVMS---STFSVDM 185 >gi|148191|gb|AAA67588.1| possibly rffE; (UDP-GlcNAc-2-epimerase) [Escherichia coli str. K-12 substr. MG1655] Length = 355 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|121997562|ref|YP_001002349.1| UDP-glucose 4-epimerase [Halorhodospira halophila SL1] gi|121588967|gb|ABM61547.1| UDP-galactose 4-epimerase [Halorhodospira halophila SL1] Length = 329 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E + VG DL ++ F + +++ AA + V ++E+ P N G + Sbjct: 44 ECLEVG----DLQDRDALSTLFQRYRFSAVVHFAASSLVGESEERPLEYHENNVGGTLNL 99 Query: 85 AKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 +A +G I+ S+ V+ S +PI E P+N YG SK+ E +A Sbjct: 100 LRACLELGTTRLIFSSSAAVYGAPSESPIPESVAPAPINPYGVSKMVCERMLA 152 >gi|260803288|ref|XP_002596522.1| hypothetical protein BRAFLDRAFT_96436 [Branchiostoma floridae] gi|229281780|gb|EEN52534.1| hypothetical protein BRAFLDRAFT_96436 [Branchiostoma floridae] Length = 744 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA PE A IN EG I + +Y ST + G Sbjct: 504 DAIVHLAAIVGFPACAAHPEKAIKINKEGTENIVRLLKPHQR-IVYSSTGSCY-GAVEGI 561 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 E +P +PL +YG++K AGE+ V V LR A ++FG++ L + Sbjct: 562 CTEDTPISPLTLYGETKAAGEKAVMGAGG--VALRLA---TVFGASPRLRL 607 >gi|166368986|ref|YP_001661259.1| UDP-glucose 4-epimerase [Microcystis aeruginosa NIES-843] gi|166091359|dbj|BAG06067.1| UDP-glucose 4-epimerase [Microcystis aeruginosa NIES-843] Length = 332 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 17/156 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + F S +++ AA+ AV ++ EP I + N G+ + +A + + S+ Sbjct: 67 NLFASRDIAAVMHFAAFIAVGESVQEPAIYYQNNVSGSLTLLQAMIAADVKKFVFSSTCA 126 Query: 104 FDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SI 153 G+ + P+ E P +PL+ Y SK E+ + + Y + A+ Y + Sbjct: 127 IYGMPKEIPMTENHPHHPLSPYAASKEMVEQILRDFDRAYGLKSVAFRYFNASGADPSGL 186 Query: 154 FGSNFL-------LSMLRLAKERREISVVCDQFGTP 182 G + L++L K+R +SV + TP Sbjct: 187 LGEDHQPETHLIPLALLTALKKRDYLSVFGTDYDTP 222 >gi|160940128|ref|ZP_02087473.1| hypothetical protein CLOBOL_05017 [Clostridium bolteae ATCC BAA-613] gi|158436708|gb|EDP14475.1| hypothetical protein CLOBOL_05017 [Clostridium bolteae ATCC BAA-613] Length = 340 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 32/151 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG----RPDIDLLKP-------------- 39 MK +V G G I + V D EII + +++ LKP Sbjct: 1 MKIIVTGGAGFIGSNFVHHMVNKYPDYEIINLDLLTYAGNLENLKPVEDKPNYKFVKGDI 60 Query: 40 ---KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 K F PDV++N AA + VD++ +PE N G + A + GI Sbjct: 61 ADRKFIFELFEKEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIKRY 120 Query: 97 Y-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 121 HQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|156740402|ref|YP_001430531.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] gi|156231730|gb|ABU56513.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] Length = 281 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + +PDV+I+ AY ++ P++ +I A GAGA+A+ A + Sbjct: 50 LDLRNGAATRTLIEQIAPDVVIH-TAYR-----QEGPDM-MAITAGGAGAVAQGAVMVRA 102 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 I++S+D VFDG E P+ YG +K E VA +I+RT+ +Y Sbjct: 103 RLIHLSSDVVFDGERSGRYTEADAPQPVTAYGAAKADAERLVADTHPAALIVRTSLIYG 161 >gi|16801682|ref|NP_471950.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] gi|16415157|emb|CAC97847.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] Length = 328 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 ++ F S D +I+ AA + V ++ + P + N G + + + G+ I S+ Sbjct: 59 LSTVFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVMEQFGVKHIVFSSS 118 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 G R PI E PT+P + YG++KL E+ + +Y +V LR Sbjct: 119 AATYGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGMKFVALR 168 >gi|117923476|ref|YP_864093.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] gi|117607232|gb|ABK42687.1| NAD-dependent epimerase/dehydratase [Magnetococcus sp. MC-1] Length = 310 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADSIGIPCIYISTDYVFDGL 107 D + AA +V ++ ++ IN G+ A A D +P +Y S+ + Sbjct: 67 DGCFHLAAVASVARSNEDWVGTHRINQTGSVNVFDAARHAKDGQPVPVVYASSAATYGAC 126 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGE 132 PI E +P NPL YG KL E Sbjct: 127 QTLPIHEDAPRNPLTAYGADKLGSE 151 >gi|323691673|ref|ZP_08105935.1| polysaccharide biosynthesis protein CapD [Clostridium symbiosum WAL-14673] gi|323504307|gb|EGB20107.1| polysaccharide biosynthesis protein CapD [Clostridium symbiosum WAL-14673] Length = 617 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 22/110 (20%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 +R P++DL+ S F + P ++ + AA+ V ED P A N Sbjct: 333 LRRTYPELDLVVLIGSVRNTHRMNSIFEQYRPQIVYHAAAHKHVPLMEDSPNEAVKNNVF 392 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 G AKAA G+ + ISTD NP NI G SK Sbjct: 393 GTYKTAKAASRYGVERFVLISTD--------------KAVNPTNIMGASK 428 >gi|323485598|ref|ZP_08090939.1| polysaccharide biosynthesis protein CapD [Clostridium symbiosum WAL-14163] gi|323401068|gb|EGA93425.1| polysaccharide biosynthesis protein CapD [Clostridium symbiosum WAL-14163] Length = 617 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 22/110 (20%) Query: 27 IRVGRPDIDLL-------KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 +R P++DL+ S F + P ++ + AA+ V ED P A N Sbjct: 333 LRRTYPELDLVVLIGSVRNTHRMNSIFEQYRPQIVYHAAAHKHVPLMEDSPNEAVKNNVF 392 Query: 80 GAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 G AKAA G+ + ISTD NP NI G SK Sbjct: 393 GTYKTAKAASRYGVERFVLISTD--------------KAVNPTNIMGASK 428 >gi|239833488|ref|ZP_04681816.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG 3301] gi|239821551|gb|EEQ93120.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG 3301] Length = 336 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D G I+ +TD V+ P E P PL YG SKL E Sbjct: 90 FPVNYYGTENIIKAMDVAGASKLIHFTTDMVYGHTYVWPQKEDHPCKPLGEYGLSKLRTE 149 Query: 133 EKVASY 138 E A + Sbjct: 150 ELAAEW 155 >gi|110668589|ref|YP_658400.1| nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626336|emb|CAJ52794.1| nucleoside-diphosphate-sugar epimerase 1 (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 328 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 19/169 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D+I + AA V + + P N G+ I +AA + + S+ V+ Sbjct: 81 DIIYHQAAQAGVRASVENPTKVTEYNVNGSQTILEAARKHDVTRVVNASSSSVYGKPEYL 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG---------SNFLL 160 P DE P P++ YG SKLA E + Y Y + + Y +++G SNF+ Sbjct: 141 PYDESHPNEPVSPYGASKLAVEHYMRVYNEVYGLPTVSLRYFTVYGPRMRPNMAISNFVS 200 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 +R + V D GT T I+ H+L+ +D S G Sbjct: 201 RCMR----GKSPEVYGD--GTQTRDFTYIADIVDANHSLL--TDDSADG 241 >gi|45358653|ref|NP_988210.1| NAD-dependent epimerase/dehydratase [Methanococcus maripaludis S2] gi|45047519|emb|CAF30646.1| UDP-glucose 4-epimerase related [Methanococcus maripaludis S2] Length = 306 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 31/176 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII---------------RVGRPDIDLLKPKDF 42 +K LV G G I + M ++ DV I+ + DI L K D Sbjct: 15 LKILVTGGAGFIGSHIVDMLIENGHDVSILDNLSTGNEKNLNSSAKFINGDI-LDKNLDL 73 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD- 101 F + +I+ AA V + + P + +IN G I + G+ I S+ Sbjct: 74 TGF------ECVIHEAAQINVRTSVENPSLDANINILGTVNILEKMKEYGVKKIIFSSSG 127 Query: 102 -YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 V+ P+DE PL+ YG SK EE + Y Y ILR + VY Sbjct: 128 GAVYGEPEYLPVDEKHSLKPLSPYGLSKFCAEEYIKLYNMLYDIEYCILRYSNVYG 183 >gi|33861764|ref|NP_893325.1| gdpmannose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33640132|emb|CAE19667.1| GDPmannose 4,6-dehydratase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 357 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 4/114 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL+ + PD I N AA + V + + PE + +A G I +A + + Sbjct: 66 DLVDSTNIIRLIKEIEPDEIYNLAAQSHVAVSFETPEYTANCDALGTLRILEAVRILNLE 125 Query: 95 C---IY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 IY ST ++ + ++P +E +P NP + YG +KL + +Y + Y I Sbjct: 126 KKTKIYQASTSELYGRVCKSPQNEDTPFNPQSPYGVAKLYSYWIIKNYRDAYGI 179 >gi|15616211|ref|NP_244516.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] gi|10176273|dbj|BAB07368.1| UDP-glucose 4-epimerase [Bacillus halodurans C-125] Length = 311 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 5/105 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D I++ AA + V + P +N +G + + + G+ ++ G S T Sbjct: 69 DRIVHLAAQSKVGPSVLNPTYDAQVNIQGTIRLLEFSRKYGVKQFVFASSAAIYGPSHTL 128 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 PI E P PL+ YG SK A E V +Y N +LR A VY Sbjct: 129 PIREEFPALPLSPYGTSKYAAEAYVKTYGRLYGLNVHVLRFANVY 173 >gi|194438587|ref|ZP_03070675.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|253775586|ref|YP_003038417.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254039001|ref|ZP_04873052.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 1_1_43] gi|254163732|ref|YP_003046840.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B str. REL606] gi|300930048|ref|ZP_07145478.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] gi|194422391|gb|EDX38390.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 101-1] gi|226838692|gb|EEH70720.1| dTDP-glucose 4,6-dehydratase [Escherichia sp. 1_1_43] gi|242379321|emb|CAQ34132.1| dTDP-glucose 4,6-dehydratase 2 [Escherichia coli BL21(DE3)] gi|253326630|gb|ACT31232.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975633|gb|ACT41304.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B str. REL606] gi|253979789|gb|ACT45459.1| dTDP-glucose 4,6-dehydratase [Escherichia coli BL21(DE3)] gi|300462036|gb|EFK25529.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 187-1] gi|309704227|emb|CBJ03574.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ETEC H10407] gi|323934179|gb|EGB30610.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1520] gi|323959045|gb|EGB54714.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H489] gi|323969369|gb|EGB64668.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA007] Length = 355 Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|331665434|ref|ZP_08366333.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA143] gi|331057332|gb|EGI29321.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA143] Length = 355 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|259089365|ref|NP_001158720.1| UDP-glucose 4-epimerase [Oncorhynchus mykiss] gi|225705724|gb|ACO08708.1| UDP-glucose 4-epimerase [Oncorhynchus mykiss] Length = 351 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 13/124 (10%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL F S +++ A AV ++ ++P + +N + + + G Sbjct: 64 ELDLLDRPGLEKLFKQHSFSAVMHFAGLKAVGESVEQPLRYYQVNLTATMNLLEVMQTHG 123 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKV-----ASYTNNY 142 + ++ S+ V+ R PIDE P TNP YGK+K EE + A N Sbjct: 124 VRNLVFSSSATVYGDPQRLPIDEQHPVGGCTNP---YGKTKYFIEEMIMDQCKAEKDWNS 180 Query: 143 VILR 146 V+LR Sbjct: 181 VLLR 184 >gi|160936341|ref|ZP_02083710.1| hypothetical protein CLOBOL_01233 [Clostridium bolteae ATCC BAA-613] gi|158440624|gb|EDP18362.1| hypothetical protein CLOBOL_01233 [Clostridium bolteae ATCC BAA-613] Length = 710 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 15/85 (17%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F ++ PD++ + AA+ V ED P A N G A+AA G I ISTD Sbjct: 377 LFRTYRPDIVYHAAAHKHVPLMEDSPNEAIKNNVLGTYKTARAAMQYGTGRFILISTD-- 434 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSK 128 NP NI G SK Sbjct: 435 ------------KAVNPANIMGASK 447 >gi|116329718|ref|YP_799437.1| nucleoside-diphosphate sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122611|gb|ABJ80504.1| Nucleoside-diphosphate sugar epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 630 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 20/119 (16%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 +S F SP+V+ + AAY V E P A N G +A + G+ + ISTD Sbjct: 352 SSIFEKHSPEVVFHSAAYKHVPMMEVNPTEAVMNNVLGTKNVADISRLSGVERFVLISTD 411 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYSIFGSN 157 NP+NI G SK A E + V+ T I T ++ GSN Sbjct: 412 --------------KAVNPVNIMGASKRAAELYLQHVSRETKTKFI--TVRFGNVLGSN 454 >gi|240144730|ref|ZP_04743331.1| NAD-dependent epimerase/dehydratase family protein [Roseburia intestinalis L1-82] gi|257203251|gb|EEV01536.1| NAD-dependent epimerase/dehydratase family protein [Roseburia intestinalis L1-82] Length = 304 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 5/146 (3%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIY 97 ++ A+ F PDVI++ A V + P N + A S I+ Sbjct: 55 QELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALQSFEKRPKIIF 114 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFG 155 +S+ V+ + PI E P++ YG K GEE + Y + Y I R ++S +G Sbjct: 115 LSSAGVYGNPKQLPITEKDALAPISPYGVHKQMGEELCSYYNRVHGYHI-RCVRIFSAYG 173 Query: 156 SNFLLSMLRLAKERREISVVCDQFGT 181 S +L ++ + D FGT Sbjct: 174 SGLRKQLLWDIYQKYLNTGRIDLFGT 199 >gi|209921262|ref|YP_002295346.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE11] gi|218697506|ref|YP_002405173.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 55989] gi|300823320|ref|ZP_07103451.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300904040|ref|ZP_07121922.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 84-1] gi|301303683|ref|ZP_07209804.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 124-1] gi|331670633|ref|ZP_08371470.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] gi|331679897|ref|ZP_08380560.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] gi|209914521|dbj|BAG79595.1| dTDP-glucose 4,6-dehydratase [Escherichia coli SE11] gi|218354238|emb|CAV00899.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 55989] gi|300403992|gb|EFJ87530.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 84-1] gi|300524106|gb|EFK45175.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 119-7] gi|300840983|gb|EFK68743.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 124-1] gi|315254153|gb|EFU34121.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 85-1] gi|320198503|gb|EFW73104.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EC4100B] gi|323182561|gb|EFZ67965.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1357] gi|323943809|gb|EGB39904.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H120] gi|324016184|gb|EGB85403.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 117-3] gi|331062106|gb|EGI34028.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA271] gi|331072444|gb|EGI43776.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H591] Length = 355 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|58337735|ref|YP_194320.1| udp-glucose 4-epimerase [Lactobacillus acidophilus NCFM] gi|227904385|ref|ZP_04022190.1| udp-glucose 4-epimerase [Lactobacillus acidophilus ATCC 4796] gi|58255052|gb|AAV43289.1| udp-glucose 4-epimerase [Lactobacillus acidophilus NCFM] gi|227867858|gb|EEJ75279.1| udp-glucose 4-epimerase [Lactobacillus acidophilus ATCC 4796] Length = 330 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ +P + N G ++ KA + + + S+ G+ + Sbjct: 68 DAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLKAMNDADVKYLVFSSSAATYGIPKKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG++K+ E+ +A Sbjct: 128 PITEDTPLDPINPYGETKMMMEKIMA 153 >gi|89896093|ref|YP_519580.1| hypothetical protein DSY3347 [Desulfitobacterium hafniense Y51] gi|89335541|dbj|BAE85136.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 620 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 19/116 (16%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F + P V+ + AA+ V E PE A N G +A+AAD+ + + ISTD Sbjct: 355 FQRYKPGVVFHAAAHKHVPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTD--- 411 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS 156 NP +I G +K E + S YV +R V GS Sbjct: 412 -----------KAVNPTSIMGATKRVAEMVIQSMDKRSDTKYVAVRFGNVLGSRGS 456 >gi|309388614|gb|ADO76494.1| NAD-dependent epimerase/dehydratase [Halanaerobium praevalens DSM 2228] Length = 317 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 21/207 (10%) Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 D I + AA V + E EI N G + +AA I +Y S+ V+ + Sbjct: 75 DYIFHQAAQAGVRSSWGEDFEIYTHNNIMGTQRLLEAARGSNIKKFVYASSSSVYGDTDK 134 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM-----L 163 P+ E + P++ YG SKLAGE Y N+ + + Y ++FG M + Sbjct: 135 LPMKETNRLQPVSPYGVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGERQRPDMAFHIFI 194 Query: 164 RLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + +++++ D Q T I +A I A + +E + F++ DG V Sbjct: 195 KAILQDKKLTIFGDGKQSRNFTHVDDIVKANILAAESDVEGEN------FNIGGDGKRVV 248 Query: 222 WAD---FAEYIFWESAERGGPYSKVYR 245 D E I + A R Y KV + Sbjct: 249 LNDAISLMEKIIGKKANR--EYQKVVK 273 >gi|259414846|ref|ZP_05738769.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B] gi|259349297|gb|EEW61044.1| GDP-L-fucose synthetase [Silicibacter sp. TrichCH4B] Length = 312 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + ++ + +D E+I R ++DL+ ++ PD I+ AA Sbjct: 9 RIFVAGHRGMVGSAVVRRLATEDCEVITAAREELDLVDQAAVNAWMQEQRPDAIVMAAAK 68 Query: 61 TAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDE---- 114 KA ++ + F N IA+AA + +++ + ++ + PI E Sbjct: 69 VGGIKANNDFPVDFLYKNLMIETNIAQAAHEADVERFLFLGSSCIYPKFAPQPIPEDSLL 128 Query: 115 ---FSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PTN Y +K+AG + + +Y Y Sbjct: 129 TGALEPTN--EWYAIAKIAGIKLMQAYRQQY 157 >gi|229548242|ref|ZP_04436967.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] gi|229306629|gb|EEN72625.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] Length = 80 Score = 37.4 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 29/56 (51%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + ++ PI E PT P N YG SKLA + + SY Y + T+ Y Sbjct: 22 VFSSTAATYGEPAQVPITETMPTQPTNPYGASKLAIDYMITSYAQAYGLGATSLRY 77 >gi|225386775|ref|ZP_03756539.1| hypothetical protein CLOSTASPAR_00523 [Clostridium asparagiforme DSM 15981] gi|225047137|gb|EEG57383.1| hypothetical protein CLOSTASPAR_00523 [Clostridium asparagiforme DSM 15981] Length = 340 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 32/151 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG----RPDIDLLKP-------------- 39 MK +V G G I + V D EII + +++ LKP Sbjct: 1 MKVIVTGGAGFIGSNFVQHMVNKYPDYEIINLDLLTYAGNLENLKPVEDKPNYKFVKGDI 60 Query: 40 --KDFA-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 ++F F PDV++N AA + VD++ +PE N G + A + GI Sbjct: 61 ADREFIFKLFEDEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIKRY 120 Query: 97 Y-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 121 HQVSTDEVYGDL---PLDRPELFFTEETPLH 148 >gi|297569768|ref|YP_003691112.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] gi|296925683|gb|ADH86493.1| NAD-dependent epimerase/dehydratase [Desulfurivibrio alkaliphilus AHT2] Length = 304 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 20/146 (13%) Query: 65 KAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT-PIDEFSPTNPL 121 ++E E AF ++NA G +A+ A G+ +Y+S+ V S P +P NP+ Sbjct: 72 ESESAAEAAFMAVNAAGTANLARQAALAGVRRLVYVSSVGVLGNSSGARPFTADAPPNPV 131 Query: 122 NIYGKSKLAGEEKV----ASYTN-NYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVV 175 Y +SK GE+ V A +T V++R VY NF R +S+V Sbjct: 132 GPYARSKWLGEQAVWQVAAEFTGFEVVVVRPPLVYGPGAPGNFA----------RLVSLV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIE 201 P +A++ +R+++ + NL++ Sbjct: 182 RRGIPLPLAAVRNSRSLVALP-NLVD 206 >gi|225558444|gb|EEH06728.1| UDP-glucose 4-epimerase [Ajellomyces capsulatus G186AR] Length = 373 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRP---DIDLLKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPE 71 S + +E+I RP ID+ D F + PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEAINRIELICGRRPGFVKIDITNEADLDRAFEQY-PDIDSVIHFAALKAVGESGEKPL 98 Query: 72 IAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGK 126 + +N G+ + +A + I + S+ V+ +R PI E P P N YG Sbjct: 99 DYYYVNVYGSICLLRAMKRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGN 158 Query: 127 SKLAGEEKVASYTN 140 +K E + + N Sbjct: 159 TKFVVETAITDFIN 172 >gi|182419136|ref|ZP_02950390.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237669356|ref|ZP_04529338.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377091|gb|EDT74661.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237655243|gb|EEP52801.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 329 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 5/98 (5%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 I++ AA + V ++ +P + F+ N G + ++ I ++ ST V+ + PI Sbjct: 70 IVHFAANSLVGESMIKPLLYFNNNVYGMQILLESMVKHDIKNIVFSSTAAVYGEPKKIPI 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 E TNP N YG++KL E+ + +Y NYV LR Sbjct: 130 LEDDETNPTNTYGETKLTMEKMMKWCNKAYGINYVALR 167 >gi|74314303|ref|YP_312722.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei Ss046] gi|73857780|gb|AAZ90487.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei Ss046] gi|323167538|gb|EFZ53244.1| dTDP-glucose 4,6-dehydratase [Shigella sonnei 53G] gi|323173405|gb|EFZ59034.1| dTDP-glucose 4,6-dehydratase [Escherichia coli LT-68] Length = 355 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|33862388|ref|NP_893948.1| dTDP-glucose-4,6-dehydratase [Prochlorococcus marinus str. MIT 9313] gi|33640501|emb|CAE20290.1| dTDP-glucose-4,6-dehydratase [Prochlorococcus marinus str. MIT 9313] Length = 370 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 15/105 (14%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIP--------CIYIST 100 PD++++ AA + VD++ D P+ N G + +A S +P +IST Sbjct: 81 PDLVMHLAAESHVDRSIDGPKAFIESNVNGTFNLLQAVLSHWEKLPEERHQHFRFHHIST 140 Query: 101 DYVFDGLSRTPIDEFS---PTNPLNIYGKSKLAGEEKVASYTNNY 142 D VF L PI FS P +P + Y SK A + V+++ + Y Sbjct: 141 DEVFGSLG--PIGRFSEITPYDPRSPYSASKAASDHLVSAWHHTY 183 >gi|325269773|ref|ZP_08136383.1| GDP-mannose 4,6-dehydratase [Prevotella multiformis DSM 16608] gi|324987746|gb|EGC19719.1| GDP-mannose 4,6-dehydratase [Prevotella multiformis DSM 16608] Length = 363 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PC-IY-ISTDYVFDG 106 PD I N AA + V + D PE ++A G I +A +G+ C IY ST ++ Sbjct: 75 PDEIYNLAAQSHVQVSFDSPEFTADVDAVGVLRILEAVRQLGMTETCRIYQASTSELYGK 134 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P +E +P +P + Y +K G V Y Y Sbjct: 135 VEEVPQNENTPFHPYSPYAVAKQYGFWIVREYREAY 170 >gi|323135720|ref|ZP_08070803.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322398811|gb|EFY01330.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 336 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 3/109 (2%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLS 108 +PDVII+ AA V + P N G + + A + + I ST V+ Sbjct: 76 APDVIIHLAAQAGVRYSLQNPRAYVESNLVGTFNVMEVARILKPRHLLIASTSSVYGASP 135 Query: 109 RTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E T+ PL +Y SK AGE SY + + I T + ++++G Sbjct: 136 SVPFHEHDRTDHPLTLYAASKKAGEAMAHSYAHLWSIPTTMFRFFTVYG 184 >gi|310821494|ref|YP_003953852.1| short chain dehydrogenase/reductase family oxidoreductase [Stigmatella aurantiaca DW4/3-1] gi|309394566|gb|ADO72025.1| Oxidoreductase, short chain dehydrogenase/reductase family [Stigmatella aurantiaca DW4/3-1] Length = 328 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 11/122 (9%) Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--VILRTAWVYSIFGSNFLLSMLRLAKE 168 P E P++ YG+SKL GE V +++ VI+R VY FL ++L +A Sbjct: 124 PRREEETPAPVSRYGRSKLGGEAAVREFSDRVPSVIVRPPIVYGPGDQEFLPALLPMA-- 181 Query: 169 RREISVVCDQFGTPTSAL----QIARAIIQIA-HNLIENSDTSLRGIFHMTADGGPVSWA 223 R V+ FG +L + A++ A D G++ M +DG W Sbjct: 182 -RLGLVLKSGFGPKHYSLIHVDDLCTALLAAAERGQTLRQDAPEAGVY-MVSDGSEYRWE 239 Query: 224 DF 225 DF Sbjct: 240 DF 241 >gi|301021422|ref|ZP_07185446.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 69-1] gi|300398058|gb|EFJ81596.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 69-1] Length = 355 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICGRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARTYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|148657967|ref|YP_001278172.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148570077|gb|ABQ92222.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 335 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYI 98 +++ +L D + N A T+ + +P IN +I +A + + +Y Sbjct: 74 EYSMNYLVQGQDYLFNLAGQTSHLDSMTDPYTDLEINCRAQLSILEACRKHNPNLKLVYA 133 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ST ++ P+DE +P+++ G +K+AGE Y N Y I Sbjct: 134 STRQIYGKPDYLPVDERHLLHPVDVNGVNKMAGEWYHILYNNVYGI 179 >gi|152964539|ref|YP_001360323.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans SRS30216] gi|151359056|gb|ABS02059.1| NAD-dependent epimerase/dehydratase [Kineococcus radiotolerans SRS30216] Length = 353 Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ A + E P++ + +N +G+ +A+ A + G+ +Y+S+ V+ G++ Sbjct: 67 DAVVHMAELSNDPLGELIPDVTYVVNHKGSVRLAETAKAAGVSRFVYMSSCSVY-GVAED 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVY 151 +DE S NP Y + K E VA ++ V +R A Y Sbjct: 126 TVDETSAVNPQTAYAECKALVERDVAPLADDEFSPVFMRNATAY 169 >gi|297526885|ref|YP_003668909.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] gi|297255801|gb|ADI32010.1| NAD-dependent epimerase/dehydratase [Staphylothermus hellenicus DSM 12710] Length = 338 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 17/169 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIR---VGRPDI----DLLK-PKDFASFFLSF 49 M+ LV G G I L + ++ DV I+ GR I D +K KD +F + Sbjct: 1 MRVLVTGGAGYIGSVLVRLLLERGYDVVILDRLFFGRDSIRDIEDRVKIVKDDIRWFDPW 60 Query: 50 ---SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 D + + AA + E +PE IN G +A + G+ +++ G Sbjct: 61 ILEGVDAVFDLAALSNDPSGELDPEKTLEINYRGRVRVANLSKKHGVSKYVLASSCSVYG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYS 152 ++E S NPL Y K+ E +V + +LR A VY Sbjct: 121 FQPGILNENSSVNPLTTYAKANYMAEREVIPLGDRKFTVTVLRQATVYG 169 >gi|282897186|ref|ZP_06305188.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] gi|281197838|gb|EFA72732.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] Length = 340 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 27/173 (15%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I++ A + + P I + IN G+ +A A ++G+ +Y+S+ V+ + Sbjct: 67 DAIVHKAELSNDPTGQLAPHITYDINHLGSVRLANLAKTMGVRRFVYMSSCSVYGIATDG 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSN-------FLL 160 + E SP NP Y + K E + ++ +R A + FG++ L Sbjct: 127 DVTEESPVNPQTAYAECKTLVERDIKLLADDDFSPTFMRNA---TAFGASPRMRFDIVLN 183 Query: 161 SMLRLAKERREISVVCDQFGTP----TSALQIARAII-------QIAHNLIEN 202 ++ LA +EI + D G P AL I +AI+ I HN + N Sbjct: 184 NLAGLAWTTKEIKMTSD--GKPWRPLVHALDICKAIVCVLEAPRDIVHNQVFN 234 >gi|259047627|ref|ZP_05738028.1| UDP-glucose 4-epimerase [Granulicatella adiacens ATCC 49175] gi|259035818|gb|EEW37073.1| UDP-glucose 4-epimerase [Granulicatella adiacens ATCC 49175] Length = 336 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%) Query: 15 SLSSMCVQD-VEIIRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 S SS+ V D +E+I RP ++D+ + F S + I+ A Y AV ++ +P Sbjct: 34 SNSSILVLDRIEVITGKRPAFYELDVCDKQGLRKVFEQESIEAAIHFAGYKAVGESVQKP 93 Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKL 129 + + N A+ + + I S+ G+ +++P+ E PT+ N YG +K+ Sbjct: 94 VMYYENNIMSTLALVEVMSEFKVKKIVFSSSATVYGIHNQSPLIETMPTSATNPYGYTKV 153 Query: 130 AGEE 133 E+ Sbjct: 154 MLEQ 157 >gi|254719138|ref|ZP_05180949.1| NAD-dependent epimerase/dehydratase [Brucella sp. 83/13] gi|265984132|ref|ZP_06096867.1| UDP-glucose epimerase [Brucella sp. 83/13] gi|306838423|ref|ZP_07471268.1| UDP-glucose 4-epimerase [Brucella sp. NF 2653] gi|264662724|gb|EEZ32985.1| UDP-glucose epimerase [Brucella sp. 83/13] gi|306406563|gb|EFM62797.1| UDP-glucose 4-epimerase [Brucella sp. NF 2653] Length = 335 Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + + N G + +A ++ G+ ++ S+ V+ + PI Sbjct: 77 VIHFAGLKAVGESSEKPLLYYDCNVLGTLRLLQAMEATGVKKLVFSSSATVYGDPEKLPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 E P + N YG++KL E+ + N+ +W +I Sbjct: 137 SEDQPLSATNPYGRTKLVIEDMLRDLYNS----DNSWAIAIL 174 >gi|255012544|ref|ZP_05284670.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Bacteroides sp. 2_1_7] Length = 280 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 35/195 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F ++ P V+ + AAY V E+ P A N G +A AA S G+ + ISTD Sbjct: 8 FRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVEKFVMISTD--- 64 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLL 160 NP NI G SK E V S + V T ++ + FG+ Sbjct: 65 -----------KAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGS 113 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQ--IARAIIQI--AHNLIENSDTSLRG----IFH 212 + + + R +I+ G P + I R + I A L+ + T +G IF Sbjct: 114 NGSVIPRFREQIAQ-----GGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFD 168 Query: 213 MTADGGPVSWADFAE 227 M G PV AD A+ Sbjct: 169 M---GEPVKIADLAK 180 >gi|187920921|ref|YP_001889953.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] gi|187719359|gb|ACD20582.1| dTDP-glucose 4,6-dehydratase [Burkholderia phytofirmans PsJN] Length = 353 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 12/113 (10%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSI 91 ++ F + P +++ AA + VD++ D P N G G + A+ Sbjct: 64 MSAIFEQYRPRAVVHFAAESHVDRSIDRPREFIDANVTGTGELLDVARLYWERLSDAERN 123 Query: 92 GIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ LS E +P P + Y SK + + V +Y + Y Sbjct: 124 SFRFLHVSTDEVYGSLSANDAAFTETTPYAPNSPYAASKASSDHIVRAYHHTY 176 >gi|117164762|emb|CAJ88311.1| putative NDP-hexose 4-ketoreductase [Streptomyces ambofaciens ATCC 23877] Length = 308 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 25/162 (15%) Query: 1 MKCLVIGNNG----QIAQSLSSMCVQDVEIIRVGR-PDIDLLKPKDFAS--------FFL 47 M+ LV+G G +A+ L ++ ++ GR P D+ P D A Sbjct: 1 MRILVVGLTGYLGAHVAERLRAL--PGTRVLGGGRSPAADV--PVDLAGDRVDRLAEALA 56 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYISTDYVFD 105 S +PD ++N A T D P +NA G + A G +++ + + Sbjct: 57 SAAPDAVVNCAGATGGD-----PVRLAEVNARGPALLCAALRLARPGARLVHLGSAAEYG 111 Query: 106 -GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 G + E + T PL YG +KLAG VA+ + V+LR Sbjct: 112 PGTMHVKVPESAATRPLAAYGATKLAGTVTVATSDLDTVVLR 153 >gi|157155600|ref|YP_001465269.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E24377A] gi|191166067|ref|ZP_03027902.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] gi|256021469|ref|ZP_05435334.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] gi|260857805|ref|YP_003231696.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O26:H11 str. 11368] gi|260870514|ref|YP_003236916.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O111:H- str. 11128] gi|300818742|ref|ZP_07098949.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 107-1] gi|300923288|ref|ZP_07139337.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 182-1] gi|301325478|ref|ZP_07218961.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 78-1] gi|309796272|ref|ZP_07690682.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 145-7] gi|332282704|ref|ZP_08395117.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] gi|157077630|gb|ABV17338.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E24377A] gi|190903843|gb|EDV63557.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B7A] gi|257756454|dbj|BAI27956.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O26:H11 str. 11368] gi|257766870|dbj|BAI38365.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O111:H- str. 11128] gi|300420433|gb|EFK03744.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 182-1] gi|300528708|gb|EFK49770.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 107-1] gi|300847705|gb|EFK75465.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 78-1] gi|308120154|gb|EFO57416.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 145-7] gi|323155190|gb|EFZ41374.1| dTDP-glucose 4,6-dehydratase [Escherichia coli EPECa14] gi|323177798|gb|EFZ63382.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1180] gi|324115748|gb|EGC09683.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E1167] gi|332105056|gb|EGJ08402.1| dTDP-glucose 4,6-dehydratase [Shigella sp. D9] Length = 355 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 TLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|157163262|ref|YP_001460580.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|170022185|ref|YP_001727139.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|193066139|ref|ZP_03047194.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|193071043|ref|ZP_03051970.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E110019] gi|194429784|ref|ZP_03062299.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B171] gi|260846435|ref|YP_003224213.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O103:H2 str. 12009] gi|300921506|ref|ZP_07137850.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 115-1] gi|312971929|ref|ZP_07786103.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1827-70] gi|157068942|gb|ABV08197.1| dTDP-glucose 4,6-dehydratase [Escherichia coli HS] gi|169757113|gb|ACA79812.1| dTDP-glucose 4,6-dehydratase [Escherichia coli ATCC 8739] gi|192926236|gb|EDV80875.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E22] gi|192955630|gb|EDV86106.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E110019] gi|194412196|gb|EDX28503.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B171] gi|257761582|dbj|BAI33079.1| dTDP-glucose 4,6-dehydratase RffG [Escherichia coli O103:H2 str. 12009] gi|300411574|gb|EFJ94884.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 115-1] gi|310334306|gb|EFQ00511.1| dTDP-glucose 4,6-dehydratase [Escherichia coli 1827-70] gi|323161148|gb|EFZ47066.1| dTDP-glucose 4,6-dehydratase [Escherichia coli E128010] Length = 355 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 TLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|270290478|ref|ZP_06196703.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] gi|304384638|ref|ZP_07366984.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] gi|270281259|gb|EFA27092.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] gi|304328832|gb|EFL96052.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] Length = 329 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F + +I+ AA++ V ++ P F N G + + G+ ++ ST Sbjct: 60 SVFTKEDVEGVIHFAAFSVVPESMKNPLKYFDNNTAGMVKLLEVMAKHGVKRIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + R PI E P P N YG+SKLA E+ Sbjct: 120 TYGEPKRVPIQESDPQVPTNPYGESKLAMEK 150 >gi|113374879|gb|ABI34796.1| UDP-glucose 4'-epimerase [Thermus aquaticus] Length = 311 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 23/175 (13%) Query: 1 MKCLVIGNNG----QIAQSL----------SSMCVQDVEIIRVGRP--DIDLLKPKDFAS 44 M+ LV G G IA++L ++ E + G P +DL + Sbjct: 1 MRVLVTGGAGFIGSHIAEALLREGLEVAVLDNLSTGKRENVPPGVPFYQVDLRDGEGVER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P + + AA +V + ++P + F++N G + +A G+ ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACRRHGVEKLVFASTGGA 120 Query: 104 FDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 G +E P P + Y SK A E +++Y NY V LR VY Sbjct: 121 IYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLKWVSLRYGNVYG 175 >gi|82546143|ref|YP_410090.1| dTDP-glucose 4,6-dehydratase [Shigella boydii Sb227] gi|81247554|gb|ABB68262.1| dTDP-glucose 4,6-dehydratase [Shigella boydii Sb227] gi|320176031|gb|EFW51100.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae CDC 74-1112] gi|320185450|gb|EFW60219.1| dTDP-glucose 4,6-dehydratase [Shigella flexneri CDC 796-83] gi|332089034|gb|EGI94145.1| dTDP-glucose 4,6-dehydratase [Shigella boydii 3594-74] Length = 355 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|27381423|ref|NP_772952.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] gi|27354591|dbj|BAC51577.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] Length = 355 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPI 112 +I+ A AV + P + + N G + A + + + S+ G+ + P+ Sbjct: 79 VIHLAGLKAVGDSNVRPMMYYENNVLGTMRLLSAMERANVTTLVFSSSATVYGMPQYLPL 138 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV 135 DE P P N YG++KL EE + Sbjct: 139 DEKHPLGPTNPYGRTKLVIEEML 161 >gi|323135556|ref|ZP_08070639.1| dTDP-glucose 4,6-dehydratase [Methylocystis sp. ATCC 49242] gi|322398647|gb|EFY01166.1| dTDP-glucose 4,6-dehydratase [Methylocystis sp. ATCC 49242] Length = 348 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 19/112 (16%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPC-------- 95 + F PDV+++ AA + VD++ D P N G + +AA +P Sbjct: 69 YSEFQPDVVMHLAAESHVDRSIDGPAAFIETNLVGTFVMLEAALEYWRALPADRARNFRF 128 Query: 96 IYISTDYVF-----DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF DGL R E +P P + Y SK + V ++ + Y Sbjct: 129 QHISTDEVFGSLGADGLFR----EDTPYAPTSPYSASKAGSDHLVRAWRHTY 176 >gi|313891050|ref|ZP_07824669.1| UDP-glucose 4-epimerase [Streptococcus pseudoporcinus SPIN 20026] gi|313120413|gb|EFR43533.1| UDP-glucose 4-epimerase [Streptococcus pseudoporcinus SPIN 20026] Length = 332 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +I+ AA++ V ++ +P F N G + + G+ I S+ G+ T Sbjct: 70 DAVIHFAAFSLVGESMTDPLKYFENNTVGMVKLLEVMRECGLKKIIFSSTAATYGIPEET 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 PI E S P+N YG+SKL E+ + +Y +V LR Sbjct: 130 PIKETSSQVPINPYGESKLMMEKIMDWCDKAYGIRFVALR 169 >gi|325108878|ref|YP_004269946.1| polysaccharide biosynthesis protein CapD [Planctomyces brasiliensis DSM 5305] gi|324969146|gb|ADY59924.1| polysaccharide biosynthesis protein CapD [Planctomyces brasiliensis DSM 5305] Length = 632 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 22/151 (14%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 +I + + + D+EI V +L F F P+++ + AAY V +D P Sbjct: 330 EIEREFARQNLGDIEINYV---TASVLDADALEQVFAEFQPELVFHAAAYKHVPLMQDNP 386 Query: 71 EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 A N +G A+ AA G + ISTD P ++ G +KL Sbjct: 387 YAAVRNNIQGTKAVVDAAHRHGSERFVLISTD--------------KAVRPTSVMGATKL 432 Query: 130 AGEEKVASYTNN----YVILRTAWVYSIFGS 156 E+ + + + ++ +R V + GS Sbjct: 433 MAEKYLQAMSQQSQTEFITVRFGNVLNSVGS 463 >gi|139439924|ref|ZP_01773276.1| Hypothetical protein COLAER_02314 [Collinsella aerofaciens ATCC 25986] gi|133774774|gb|EBA38594.1| Hypothetical protein COLAER_02314 [Collinsella aerofaciens ATCC 25986] Length = 339 Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA + D + +PE N EG + +A GI ++STD V+ L+ Sbjct: 80 DAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVRKYGIRYHHVSTDEVYGDLALDD 139 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 +F +P P + Y +K + + V ++T Y + T Sbjct: 140 PAKFTEETPYKPSSPYSSTKASSDMLVRAWTRTYGLRTT 178 >gi|332345768|gb|AEE59102.1| dTDP-glucose 4,6-dehydratase RfbB [Escherichia coli UMNK88] Length = 355 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 TLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|313768244|ref|YP_004061924.1| hypothetical protein MpV1_041 [Micromonas sp. RCC1109 virus MpV1] gi|312598940|gb|ADQ90964.1| hypothetical protein MpV1_041 [Micromonas sp. RCC1109 virus MpV1] Length = 306 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 6/132 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G+NGQ L + ++ GR D D+L + + S + A Sbjct: 5 VITGSNGQDGTYLRELLESKGYFVKCFGRQD-DILNYSNVCACISECSEYDRVEIYNLAA 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGI----PCIYISTDYVFDGLSRTPIDEFSPT 118 ++ + +N G + +A +GI S+ +F + + P DE +P Sbjct: 64 QSYVGTHTKMTYELNTLGLLNVLEAVKQLGISEKCKIFQASSSEIFGSVDKVPQDEQTPH 123 Query: 119 NPLNIYGKSKLA 130 NP +YG SKL+ Sbjct: 124 NPTTLYGVSKLS 135 >gi|317153690|ref|YP_004121738.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] gi|316943941|gb|ADU62992.1| NAD-dependent epimerase/dehydratase [Desulfovibrio aespoeensis Aspo-2] Length = 336 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA A+ + P+ N +G + +AA +G+ ++ ST V+ Sbjct: 79 DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARDLGVERVVHTSTSEVYGTARFV 138 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 PI E P + Y +K+ ++ S+ N + I Sbjct: 139 PITEDHPLQGQSPYSATKIGADQIAMSFHNAFEI 172 >gi|223985393|ref|ZP_03635458.1| hypothetical protein HOLDEFILI_02764 [Holdemania filiformis DSM 12042] gi|223962638|gb|EEF67085.1| hypothetical protein HOLDEFILI_02764 [Holdemania filiformis DSM 12042] Length = 300 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 15/163 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----------DIDLLKPKDFASFFLSF 49 MK +++G G + +L+S+ Q E +G P +I+ KD + F Sbjct: 1 MKIILLGC-GYLGYNLASLLSQKAETEIIGLPSPYTPLCSNFKEINAFSAKDLDQ--VDF 57 Query: 50 SPDVIINPAAYTAVD-KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 V+I+ + A + ++EDE + + + + + I++S+ G + Sbjct: 58 EDAVVIDTISLLANNARSEDEEKTLGGVEEKYEFLLCQLKQRGARLFIFMSSGGTVYGNA 117 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +P +P+ +Y +SK E+ + Y+ILR A Y Sbjct: 118 AEPICEDAPLHPITLYARSKTRCEQVIRQSGLPYLILRLANPY 160 >gi|153007280|ref|YP_001381605.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152030853|gb|ABS28621.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 336 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +++ AA + VD++ P + N G + +AA +G+ +++STD V+ L + Sbjct: 76 DAVLHLAAESHVDRSILSPPVFIETNVRGTQVLLEAARELGVRRFVHVSTDEVYGSLGPS 135 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + E +P +P + Y SK + + +Y + Sbjct: 136 GLFTEETPLDPSSPYSASKASSDLLALAYARTF 168 >gi|58039745|ref|YP_191709.1| putative oxidoreductase [Gluconobacter oxydans 621H] gi|58002159|gb|AAW61053.1| Putative oxidoreductase [Gluconobacter oxydans 621H] Length = 342 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 4/145 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ L+ G G + Q L + + + +D+ F PD ++ AA Sbjct: 41 LRILLTGGQGFVGQHLKARLKDRIPGHVLLEDPMDIRDRAAVERFVKDEKPDACLHLAAV 100 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGL--SRTPIDEFS 116 ++V +A+ E A+++N +G +A+ ++ +++ST ++ S P+DE + Sbjct: 101 SSVARAKAENAEAWTVNLDGTLILAETFETHAPQASFVFVSTAEIYGASFSSGQPLDESA 160 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNN 141 P+N Y SK A + + + + Sbjct: 161 VIAPVNAYASSKAAADLAIGNLSQE 185 >gi|58699411|ref|ZP_00374167.1| NAD dependent epimerase/dehydratase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534071|gb|EAL58314.1| NAD dependent epimerase/dehydratase [Wolbachia endosymbiont of Drosophila ananassae] Length = 176 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 4/122 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPCI-YISTDYVFDGLSR 109 DVI+ + D + + SI +G + + D + + + Y+S V+ S Sbjct: 37 DVILFNYEKVSQDLLKSATHVLISIPPDGDDVVERYGDCLQNVKWLGYLSATSVYGDHSG 96 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 +DE S T P+ I G+ +L E+K + I R A +Y G N L L+LAK++ Sbjct: 97 NWVDEESETRPIEIRGEKRLKSEKKWLNSKLPVHIFRLAGIYGP-GRNVLFD-LQLAKQK 154 Query: 170 RE 171 E Sbjct: 155 CE 156 >gi|324111014|gb|EGC05001.1| dTDP-glucose 4,6-dehydratase [Escherichia fergusonii B253] Length = 355 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALAEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|320666078|gb|EFX33092.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. LSU-61] Length = 355 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 ALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|326792854|ref|YP_004310675.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] gi|326543618|gb|ADZ85477.1| dTDP-glucose 4,6-dehydratase [Clostridium lentocellum DSM 5427] Length = 348 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 16/111 (14%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------------ 91 S F D ++N AA + VD++ ++PEI + N G + A Sbjct: 68 SLFTEHEIDTVVNFAAESHVDRSIEDPEIFLTTNILGTQVLLDTAKKYWKVNIEDKYCKS 127 Query: 92 ---GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASY 138 G+ + +STD V+ L + + E +P P + Y SK + + V +Y Sbjct: 128 FKEGVKYLQVSTDEVYGTLGKEGMFTETTPLAPNSPYSASKASADMIVRAY 178 >gi|148698014|gb|EDL29961.1| galactose-4-epimerase, UDP, isoform CRA_b [Mus musculus] Length = 361 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQ++ V ++D+L F S +I+ A AV ++ +P + +N G Sbjct: 65 VQELTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTG 124 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP-LNIYGKSKLAGEEKV--- 135 + + + G+ ++ S+ V+ P+DE PT N YGKSK EE + Sbjct: 125 TIQLLEIMRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDL 184 Query: 136 --ASYTNNYVILR 146 A N V+LR Sbjct: 185 CRADTAWNAVLLR 197 >gi|56459668|ref|YP_154949.1| UDP-glucose 4-epimerase [Idiomarina loihiensis L2TR] gi|56178678|gb|AAV81400.1| UDP-glucose 4-epimerase [Idiomarina loihiensis L2TR] Length = 336 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+ LL+ F F + +++ A +V+++ P + N G+ ++ K + G Sbjct: 60 DLGLLE-----KLFGEFKFNAVLHLAGLKSVNESLSHPVEYYENNVTGSLSLLKVMEKFG 114 Query: 93 IPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGE 132 CI S+ G PI E S + +N YG SKL E Sbjct: 115 CKCIVFSSSATVYGHPECVPISENSTLSTINPYGSSKLMVE 155 >gi|312867758|ref|ZP_07727964.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] gi|311096821|gb|EFQ55059.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis F0405] Length = 338 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%) Query: 17 SSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 S +Q+VE I +G+ DID+ + F+ P +I+ AA AV ++ P Sbjct: 39 SKKSIQEVEKI-IGKSITLYDIDVRDKEKLLEVFVKEQPTGVIHFAALKAVGESVQIPLT 97 Query: 73 AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAG 131 + N G + + + + I S+ G T PI E P + N YG++KL Sbjct: 98 YYENNITGTLTLLRVMEEVQCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMI 157 Query: 132 EE 133 EE Sbjct: 158 EE 159 >gi|157150607|ref|YP_001450301.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] gi|157075401|gb|ABV10084.1| UDP-glucose 4-epimerase [Streptococcus gordonii str. Challis substr. CH1] Length = 339 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ + F F P +I+ A AV ++ P + N G + + + + Sbjct: 58 EVDICDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLRVMEEVN 117 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 I S+ G T PI E P + N YG++KL EE + A T N V+LR Sbjct: 118 CKNIIFSSSATVYGDPHTVPILENFPVSVTNPYGRTKLMLEEILTDIYKADSTWNIVLLR 177 >gi|323189489|gb|EFZ74769.1| dTDP-glucose 4,6-dehydratase [Escherichia coli RN587/1] Length = 355 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALAEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|116249605|ref|YP_765443.1| putative NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. viciae 3841] gi|115254253|emb|CAK03868.1| putative NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. viciae 3841] Length = 324 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D++ + AA AED P +AF + AEG + +AA G+ + ++ GL+ + Sbjct: 75 DIVFHQAAIRITQCAED-PRLAFDVLAEGTFNVLEAAVKAGVSKVVAASSASVLGLAESF 133 Query: 111 PIDE-FSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 P E P N IYG +K E + S+ YV LR VY Sbjct: 134 PTTEAHHPYNNRTIYGAAKTFNEGLLRSFAEMYGLRYVALRYFNVYG 180 >gi|85813551|emb|CAF33057.1| putative apramycin biosynthetic oxidoreductase 5 [Streptoalloteichus tenebrarius] Length = 348 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 20/179 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA + PE+ S+N E + + + G+ +Y S+ V+ G+S + Sbjct: 75 DVVVHLAAVANDPSFDLNPELGRSVNFECLDHVMRLSKEAGVRRFVYASSASVY-GISDS 133 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFLLSMLRL- 165 P +DE P P+ Y + K GEE + T++ V LR A V + L + L Sbjct: 134 PEVDESHPLVPITDYNRYKALGEEILFPLTDDSFETVALRAATVCGVSTRQRLDLTVNLL 193 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 A REI+V P ++ ++ + H L+ D SL + +GGP++ Sbjct: 194 TAQAVGNREITVFGGTQYRPNVHVE---DLVGVYHRLV--VDDSLGAL-----NGGPIN 242 >gi|33864957|ref|NP_896516.1| UDP-glucose 4-epimerase-like protein [Synechococcus sp. WH 8102] gi|33638641|emb|CAE06936.1| UDP-glucose 4-epimerase-like protein [Synechococcus sp. WH 8102] Length = 345 Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Query: 35 DLLKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+ P++ F D +I+ A AV ++ ++P + +N G+ + +A D+ Sbjct: 73 DIRSPRNLEQAFTKAPSGIDAVIHFAGLKAVGESVEKPLHYWDVNLNGSRCLLEAMDAHS 132 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 ++ S+ V+ PI +P +P+N YG +K A E ++ Sbjct: 133 CHTLVFSSSATVYGNPETVPIPATAPISPINPYGHTKAAVERMLS 177 >gi|302534911|ref|ZP_07287253.1| UDP-glucose 4-epimerase [Streptomyces sp. C] gi|302443806|gb|EFL15622.1| UDP-glucose 4-epimerase [Streptomyces sp. C] Length = 321 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 18/181 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 A+ L S D +++ AA + V ++ P + N G A+ A G+ ++ ST Sbjct: 58 AADHLDSSYDAVLHFAASSQVGESVVNPGKYWDNNVGGTLALLTAMREAGVRRLVFSSTA 117 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIF 154 + + + E S T P N YG SKLA + +A + V LR A Y F Sbjct: 118 ATYGEPAEGALTETSVTAPTNPYGASKLAVDHMIAGECAAHGLAAVSLRYFNVAGAYREF 177 Query: 155 G------SNFLLSMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 G ++ + +L++A +RE ISV D + TP R I +A +L E ++L Sbjct: 178 GERHDPETHLIPLVLQVALGQRESISVFGDDYPTPDG--TCVRDYIHVA-DLAEAHLSAL 234 Query: 208 R 208 R Sbjct: 235 R 235 >gi|302551813|ref|ZP_07304155.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] gi|302469431|gb|EFL32524.1| UDP-glucose 4-epimerase [Streptomyces viridochromogenes DSM 40736] Length = 326 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 L + A S +++ AA V ++ D P + N EG + +A + +P + Sbjct: 53 LDAERLARVLADHSVTGVVHLAAKKQVGESVDRPLHYYRENVEGLRTLLEAVTAARVPSL 112 Query: 97 YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGE 132 S+ G+ + E +P P++ YG++KLAGE Sbjct: 113 VFSSSAAVYGMPDVDLVTEETPCLPMSPYGETKLAGE 149 >gi|217978848|ref|YP_002362995.1| dTDP-glucose 4,6-dehydratase [Methylocella silvestris BL2] gi|217504224|gb|ACK51633.1| dTDP-glucose 4,6-dehydratase [Methylocella silvestris BL2] Length = 356 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 15/121 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--G 92 D++ S F F PD++++ AA + VD++ D P N G + +A G Sbjct: 64 DIVDAPRMQSVFAQFQPDIVMHLAAESHVDRSIDGPGEFIQTNVVGTFTLLQATLGYWRG 123 Query: 93 IPCI--------YISTDYVFDGLSRTPIDEFSPTN---PLNIYGKSKLAGEEKVASYTNN 141 +P +ISTD VF L P F T P + Y SK A + V ++ + Sbjct: 124 LPAARQTSFRFHHISTDEVFGSLG--PEGFFIETTAYCPNSPYSASKAASDHLVNAWRHT 181 Query: 142 Y 142 Y Sbjct: 182 Y 182 >gi|75907270|ref|YP_321566.1| UDP-galactose 4-epimerase [Anabaena variabilis ATCC 29413] gi|75700995|gb|ABA20671.1| UDP-galactose 4-epimerase [Anabaena variabilis ATCC 29413] Length = 336 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 9/149 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL + + F +++ AA +V ++ P ++ N + + G+ Sbjct: 52 DLKNSECLSQVFHQHQFAAVLHFAASLSVPESVARPLDYYANNTRNTLNLLRCCHETGVN 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAW 149 I+ ST V+ + E +PT P+N YG+SKL+ E + + YVILR Sbjct: 112 QIIFSSTAAVYGQPETAVVTESTPTEPINPYGRSKLSCEWLIRDHAKASDLRYVILR--- 168 Query: 150 VYSIFGSNFLLSMLRLAKERRE-ISVVCD 177 +++ G+ + +++K+ I V CD Sbjct: 169 YFNVAGAEPGGRLGQMSKDASHLIRVTCD 197 >gi|66044181|ref|YP_234022.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] gi|63254888|gb|AAY35984.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 366 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIP 94 F P +++ AA + VD++ PE N G + +AA D Sbjct: 67 LFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEADDKAAFR 126 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 127 FLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTY 176 >gi|24217231|ref|NP_714714.1| capsular polysaccharide biosynthesis protein [Leptospira interrogans serovar Lai str. 56601] gi|45655720|ref|YP_003529.1| capsular polysaccharide biosynthesis protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24202285|gb|AAN51729.1| nucleoside-diphosphate sugar epimerase [Leptospira interrogans serovar Lai str. 56601] gi|45602691|gb|AAS72166.1| capsular polysaccharide biosynthesis protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 629 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 18/115 (15%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 +S F SP+V+ + AAY V E P A N G IA + G+ + ISTD Sbjct: 352 SSIFEKHSPEVVFHSAAYKHVPMMEINPTEAVMNNVLGTKNIADISRISGVERFVLISTD 411 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP+NI G SK A E + + RT ++ FG+ Sbjct: 412 --------------KAVNPVNIMGASKRAAELYLQHISRET---RTKFITVRFGN 449 >gi|15833975|ref|NP_312748.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. Sakai] gi|168751746|ref|ZP_02776768.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|168753682|ref|ZP_02778689.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|168764134|ref|ZP_02789141.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|168768066|ref|ZP_02793073.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|168775664|ref|ZP_02800671.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|168780684|ref|ZP_02805691.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|168786623|ref|ZP_02811630.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|168801005|ref|ZP_02826012.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|195938077|ref|ZP_03083459.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4024] gi|208805689|ref|ZP_03248026.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208813029|ref|ZP_03254358.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208818281|ref|ZP_03258601.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209399629|ref|YP_002273306.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|217325882|ref|ZP_03441966.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254795786|ref|YP_003080623.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14359] gi|261225563|ref|ZP_05939844.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. FRIK2000] gi|261255609|ref|ZP_05948142.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. FRIK966] gi|13364196|dbj|BAB38144.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. Sakai] gi|187768885|gb|EDU32729.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4196] gi|188014279|gb|EDU52401.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4113] gi|189001405|gb|EDU70391.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4076] gi|189358938|gb|EDU77357.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4401] gi|189362621|gb|EDU81040.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4486] gi|189365802|gb|EDU84218.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4501] gi|189373224|gb|EDU91640.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC869] gi|189376800|gb|EDU95216.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC508] gi|208725490|gb|EDZ75091.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4206] gi|208734306|gb|EDZ82993.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4045] gi|208738404|gb|EDZ86086.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4042] gi|209161029|gb|ACI38462.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC4115] gi|209753438|gb|ACI75026.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753440|gb|ACI75027.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753442|gb|ACI75028.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|209753446|gb|ACI75030.1| glucose-1-phosphate thymidylyltransferase [Escherichia coli] gi|217322103|gb|EEC30527.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14588] gi|254595186|gb|ACT74547.1| dTDP-D-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. TW14359] gi|320191118|gb|EFW65768.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. EC1212] gi|320639273|gb|EFX08895.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. G5101] gi|320644658|gb|EFX13708.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H- str. 493-89] gi|320649983|gb|EFX18486.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H- str. H 2687] gi|326344246|gb|EGD68006.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. 1125] gi|326347927|gb|EGD71641.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O157:H7 str. 1044] Length = 355 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|291534641|emb|CBL07753.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis M50/1] gi|291540659|emb|CBL13770.1| Nucleoside-diphosphate-sugar epimerases [Roseburia intestinalis XB6B4] Length = 304 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 5/146 (3%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIY 97 ++ A+ F PDVI++ A V + P N + A S I+ Sbjct: 55 QELANIFTGVQPDVILHCAGSANVGASIVNPMADLDGNLHSLYQLLLALKSFEKRPKIIF 114 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSIFG 155 +S+ V+ + PI E P++ YG K GEE + Y + Y I R ++S +G Sbjct: 115 LSSAGVYGNPKQLPITEKDALAPISPYGVHKQMGEELCSYYNRVHGYHI-RCVRIFSAYG 173 Query: 156 SNFLLSMLRLAKERREISVVCDQFGT 181 S +L ++ + D FGT Sbjct: 174 SGLRKQLLWDIYQKYLNTGRIDLFGT 199 >gi|163743493|ref|ZP_02150871.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10] gi|161383196|gb|EDQ07587.1| dTDP-glucose 4,6-dehydratase [Phaeobacter gallaeciensis 2.10] Length = 350 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD---- 89 +D+ + F PDV+++ AA + VD++ D P N G + +AA Sbjct: 56 VDIRDRAALDTVFARHRPDVVMHLAAESHVDRSIDGPGDFIETNITGTYQMLEAARKYWA 115 Query: 90 SIGIPCIY----ISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G P + ISTD V+ LS P E + +P + Y SK A + V ++ Y Sbjct: 116 EAGRPEAFRFHHISTDEVYGSLSADPSVMFTEETGYDPRSPYSASKAASDHLVRAWGETY 175 >gi|150017436|ref|YP_001309690.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] gi|149903901|gb|ABR34734.1| dTDP-glucose 4,6-dehydratase [Clostridium beijerinckii NCIMB 8052] Length = 349 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 10/118 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + + F + + +++ AA + VD++ EPE+ N G I A + Sbjct: 60 DICDKELVSMLFKKYHINYVVHFAAESHVDRSIKEPEVFAKTNILGTVNILNCAKNAWET 119 Query: 92 ------GIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + ISTD V+ L S+ E +P +P + Y SK + V +Y + Y Sbjct: 120 EKGFEEGVKFLQISTDEVYGSLGSKGFFKETTPLDPHSPYSSSKAGADLIVKAYYDTY 177 >gi|67924512|ref|ZP_00517932.1| UDP-glucose 4-epimerase [Crocosphaera watsonii WH 8501] gi|67853627|gb|EAM48966.1| UDP-glucose 4-epimerase [Crocosphaera watsonii WH 8501] Length = 334 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 9/136 (6%) Query: 20 CVQDV---EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 VQDV E+I D LL F S + +++ AA+ AV ++ +P I + Sbjct: 45 IVQDVLKVELIVGDTNDRTLLD-----QIFSSRNITAVMHFAAFIAVGESVRDPAIYYQN 99 Query: 77 NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 N G + +A + I ++ ST ++ P+ E P NPLN Y SK E+ + Sbjct: 100 NVAGTLTLLEAMIAANIKKFVFSSTCAIYGMPQEIPMTEKHPNNPLNAYASSKYMVEQIL 159 Query: 136 ASYTNNYVILRTAWVY 151 + Y + + Y Sbjct: 160 KDFDRAYGLKSVVFRY 175 >gi|255014258|ref|ZP_05286384.1| putative nucleoside-diphosphate sugar epimerase/dehydrase [Bacteroides sp. 2_1_7] Length = 280 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 35/197 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F ++ P V+ + AAY V E+ P A N G +A AA S G+ + ISTD Sbjct: 8 FRNWHPQVVFHAAAYKHVPLMEENPCEAIRTNVFGTRVMADAAVSYGVEKFVMISTD--- 64 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSNFLL 160 NP NI G SK E V S + V T ++ + FG+ Sbjct: 65 -----------KAVNPTNIMGCSKRLAEIYVQSLSLAIERGEVKGETRFITTRFGNVLGS 113 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQ--IARAIIQI--AHNLIENSDTSLRG----IFH 212 + + + R +I+ G P + I R + I A L+ + T +G IF Sbjct: 114 NGSVIPRFREQIAQ-----GGPVTVTHPDIIRYFMTIPEACRLVLEAGTMGKGGEIFIFD 168 Query: 213 MTADGGPVSWADFAEYI 229 M G PV AD A+ + Sbjct: 169 M---GEPVKIADLAKRM 182 >gi|222836566|gb|EEE74973.1| predicted protein [Populus trichocarpa] Length = 336 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F S +I+ AA AV ++ +P + N G A+ +A + G+ ++ S+ V Sbjct: 67 LFAEHSIREVIHFAALKAVGESVAQPLRYYEHNVGGTVALLQAMRTAGVRSLVFSSSATV 126 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + + PI E P + N YG+SKL EE +A Sbjct: 127 YGDPASLPIREDFPLSATNPYGRSKLWIEEMLA 159 >gi|75675258|ref|YP_317679.1| UDP-glucose 4-epimerase [Nitrobacter winogradskyi Nb-255] gi|74420128|gb|ABA04327.1| UDP-galactose 4-epimerase [Nitrobacter winogradskyi Nb-255] Length = 336 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I+ ST V+ + P+ E +PT PL+ YG SKL E + +++ NYV+LR Sbjct: 113 IFSSTAAVYGNPDQMPVAEEAPTRPLSPYGSSKLMTEIMLHDVGSAHDLNYVVLR 167 >gi|312210110|emb|CBX90197.1| similar to NAD-dependent epimerase/dehydratase [Leptosphaeria maculans] Length = 310 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS- 108 +PD +++ A ++ D F IN G+ + +AA +GI I +++ G++ Sbjct: 82 TPDALVHFAGIPQPNRLPDNE--CFRINTMGSYNVIEAACKLGIKKIILASSITTYGVTY 139 Query: 109 --------RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P+ E +PT P+++Y SKL E S+ + Sbjct: 140 ANGDLDFPHFPLTEETPTTPMDVYATSKLCMERIADSFARRF 181 >gi|312142954|ref|YP_003994400.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] gi|311903605|gb|ADQ14046.1| NAD-dependent epimerase/dehydratase [Halanaerobium sp. 'sapolanicus'] Length = 314 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 17/205 (8%) Query: 52 DVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 D I + AA V + E EI N G + +AA I +Y S+ V+ + Sbjct: 75 DYIFHQAAQAGVRSSWGEDFEIYTHNNIMGTQRLLEAAKESNIKKFVYASSSSVYGDTDQ 134 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSM-----L 163 P+ E + P++ YG SKLAGE Y N+ + + Y ++FG M + Sbjct: 135 LPMQETNRLQPVSPYGVSKLAGENLCYLYYKNFNVPTVSLRYFTVFGERQRPDMAFHIFI 194 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV--- 220 + + +++++ D G + + I++ A+ L SD + IF++ DG V Sbjct: 195 KAILQDKKLTIFGD--GKQSRNFTHVQDIVK-ANILAAESDAAGE-IFNIGGDGKRVVLN 250 Query: 221 SWADFAEYIFWESAERGGPYSKVYR 245 D E I + A R Y KV + Sbjct: 251 DSIDLMEEIIGKKANR--EYQKVVK 273 >gi|192360705|ref|YP_001981285.1| UDP-glucose 4-epimerase [Cellvibrio japonicus Ueda107] gi|190686870|gb|ACE84548.1| UDP-glucose 4-epimerase [Cellvibrio japonicus Ueda107] Length = 348 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 16/160 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPD--------IDLLKPKDFASFFLSFSPDV 53 C+ + N+G + + ++C E + RV R +D+ F + + Sbjct: 26 CVELINSGYLPVVVDNLCNSKAESLKRVARITGVEPVFYAVDINDKAAMGEVFATHQIEA 85 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 +++ A AV ++ P + N G ++ + ++ + I+ S+ V+ PI Sbjct: 86 VMHFAGLKAVGESNQIPMKYYRYNVAGTLSLTEVMEAFSVWKLIFSSSATVYGDPVSVPI 145 Query: 113 DEFSPTNPLNIYGKSKLAGEE---KVASYTN---NYVILR 146 DE T+ N YG+SKL EE +A N N+ +LR Sbjct: 146 DESFATSATNPYGRSKLMVEEILHDIARAPNSQWNFTLLR 185 >gi|219849034|ref|YP_002463467.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] gi|219543293|gb|ACL25031.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM 9485] Length = 342 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 17/128 (13%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 DI L D F D +++ A + + E+ F IN +G+ +AKAA + G Sbjct: 54 DIRRLTTADLVGF------DAVVHMAELSNDPLGQLNRELTFQINHQGSVNLAKAAKAAG 107 Query: 93 IP-CIYISTDYVF----DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VI 144 + +Y+S+ V+ +G +T E SP NP Y + K+ E +A ++ V Sbjct: 108 VTRFVYMSSCSVYGIGEEGEIKT---EESPVNPQTAYAECKVLVEHDLAQMADDDFSPVF 164 Query: 145 LRTAWVYS 152 LR A + Sbjct: 165 LRNATAFG 172 >gi|91201500|emb|CAJ74560.1| strongly similar to dTDP-D-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 340 Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVI+N AA T VD++ + +G + +A+ I I ISTD V+ Sbjct: 77 DVIVNFAAETHVDRSILSAGTFIDTDIKGVFVLLEASRRYTIKKFIQISTDEVYGTAFHD 136 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 E NP N Y SK G+ +Y N Y + Sbjct: 137 AFKETDSLNPSNPYAASKAGGDRLAFAYWNTYKL 170 >gi|219670507|ref|YP_002460942.1| polysaccharide biosynthesis protein CapD [Desulfitobacterium hafniense DCB-2] gi|219540767|gb|ACL22506.1| polysaccharide biosynthesis protein CapD [Desulfitobacterium hafniense DCB-2] Length = 610 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 19/116 (16%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F + P V+ + AA+ V E PE A N G +A+AAD+ + + ISTD Sbjct: 345 FQRYKPGVVFHAAAHKHVPLMEKNPEEAMKNNIMGTSNLAEAADAAKVKTFVLISTD--- 401 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS 156 NP +I G +K E + S YV +R V GS Sbjct: 402 -----------KAVNPTSIMGATKRVAEMVIQSMDKRSDTKYVAVRFGNVLGSRGS 446 >gi|329667489|gb|AEB93437.1| dTDP-D-glucose 4,6-dehydratase [Lactobacillus johnsonii DPC 6026] Length = 345 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F P+V++N AA + VD++ + PEI N G + A GI Sbjct: 58 LDIRDREGVYKLFEEEKPNVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 118 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 148 >gi|289628981|ref|ZP_06461935.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647531|ref|ZP_06478874.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|330869926|gb|EGH04635.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 298 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL + PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPGYYQVDLADVAGLRTLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE + P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTQPAPANDYAVSKLAMEYMASLWHAKLPIVIARPFNYTGVGQAENFLL 178 >gi|148907389|gb|ABR16828.1| unknown [Picea sitchensis] Length = 296 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDLL + FLS D +I+ A AV ++ +P + + N G + + S G Sbjct: 67 IDLLDKEAMEKLFLSTKFDAVIHFAGLKAVGESVAKPLLYYKNNIVGTINLLETMVSHGC 126 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ P E P +N YG++KL EE Sbjct: 127 KKLVFSSSATVYGQPKEVPCTEDFPICAMNPYGRTKLFIEE 167 >gi|88604300|ref|YP_504478.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] gi|88189762|gb|ABD42759.1| dTDP-glucose 4,6-dehydratase [Methanospirillum hungatei JF-1] Length = 351 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 10/120 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ P+ S F + +IN AA + VD++ +P I N G + AA + Sbjct: 61 DITDPEQVQSIFSRYDIQGVINFAAESHVDRSIHDPAIFLKTNILGTHTLLDAAQAAWRK 120 Query: 92 ------GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + +STD V+ L T + E +P +P + Y SK + +Y + + I Sbjct: 121 NGTWKKNTTFLQVSTDEVYGSLGPTGLFSETTPLDPHSPYSASKAGSDLIAKAYHDTFGI 180 >gi|319791463|ref|YP_004153103.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] gi|315593926|gb|ADU34992.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] Length = 334 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ + AA A+ + P N EG + +AA + + ++ ST V+ R Sbjct: 84 DVVCHLAALIAIPYSYVAPRSYVRTNVEGTLNVVEAARRLSVRRVVHTSTSEVYGTAVRV 143 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P + Y SK+ ++ SY ++ Sbjct: 144 PIDEEHPLQGQSPYSASKIGADKIAESYYRSF 175 >gi|331675258|ref|ZP_08376009.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA280] gi|331067544|gb|EGI38948.1| dTDP-glucose 4,6-dehydratase [Escherichia coli TA280] Length = 355 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|303326680|ref|ZP_07357122.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. 3_1_syn3] gi|302862668|gb|EFL85600.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio sp. 3_1_syn3] Length = 359 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 15/112 (13%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG-------AGAIAKAADSIGIPCI-- 96 F F PD +++ AA + VD++ D P N G A K+ + G P Sbjct: 71 FEIFEPDAVMHLAAESHVDRSIDSPAAFLETNVHGTFVLLEEARRYWKSLTASGSPKARD 130 Query: 97 ----YISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF LS + E +P P + Y SK A + V ++ Y Sbjct: 131 FRFHHISTDEVFGDLSGGQGFFTEETPYAPSSPYSASKAASDHLVRAWQRTY 182 >gi|302038314|ref|YP_003798636.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] gi|300606378|emb|CBK42711.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] Length = 342 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K + + + IIN AA T VD++ +P + G G + + A G+ Sbjct: 58 DICDQKAVHATLQTHRIEGIINCAAETHVDRSILDPGAFARTDVVGTGILLEEARQAGVQ 117 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ + + E P + Y SK G+ V SY Y Sbjct: 118 RFLQVSTDEVYGSVEQGSSTEGDRLEPRSPYSASKAGGDLLVLSYWTTY 166 >gi|291543270|emb|CBL16379.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 18P13] Length = 344 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + P I N G + A GI + +STD Sbjct: 68 QLFEQEHPDIVVNFAAESHVDRSIENPGIFLQTNIMGTQVLMDACRKYGIQRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y + Sbjct: 128 VYGDLPLDRPDLFFTEDTPIHTSSPYSSSKAGADLLVLAYYRTF 171 >gi|262282420|ref|ZP_06060188.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] gi|262261711|gb|EEY80409.1| UDP-glucose 4-epimerase [Streptococcus sp. 2_1_36FAA] Length = 339 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ + F F P +I+ A AV ++ P + N G + + + + Sbjct: 58 EVDICDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLRVMEEVN 117 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 I S+ G T PI E P + N YG++KL EE + A T N V+LR Sbjct: 118 CKNIIFSSSATVYGDPHTVPILEDFPVSVTNPYGRTKLMLEEILTDIYKADSTWNIVLLR 177 >gi|91975227|ref|YP_567886.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] gi|91681683|gb|ABE37985.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] Length = 290 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 A F + PDV+IN + +P ++ IN+ ++ G I+ISTD Sbjct: 67 MARVFANHRPDVVINCIGVVKQLSSAKDPLVSIPINSMLPHRLSALCALSGARLIHISTD 126 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF+G R E + ++YG++K GE Sbjct: 127 CVFNG-ERGAYREDDIPDANDLYGRTKFLGE 156 >gi|95929349|ref|ZP_01312092.1| polysaccharide biosynthesis protein CapD [Desulfuromonas acetoxidans DSM 684] gi|95134465|gb|EAT16121.1| polysaccharide biosynthesis protein CapD [Desulfuromonas acetoxidans DSM 684] Length = 623 Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 18/114 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F F P+V+ + AAY V E P A + N G+ +A+ A + + +STD Sbjct: 354 AIFDEFMPEVVFHAAAYKHVPMMEVNPAEAVNNNVRGSQVVAETAHMFRVERFVMVSTD- 412 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K E+ V + + +T +V FG+ Sbjct: 413 -------------KAVNPTNVMGTTKRVAEKIVQALSRRS---KTRFVTVRFGN 450 >gi|317408210|gb|ADV17643.1| Fcl [Salmonella enterica] Length = 320 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + V G+NG + +L M Q D+EII R ++DLL + +SFF S D + AA Sbjct: 4 RVFVAGHNGMVGSALVRMLQQEQDIEIITRKRNELDLLSQQAVSSFFKSERIDQVYLAAA 63 >gi|83950219|ref|ZP_00958952.1| hypothetical protein ISM_03955 [Roseovarius nubinhibens ISM] gi|83838118|gb|EAP77414.1| hypothetical protein ISM_03955 [Roseovarius nubinhibens ISM] Length = 336 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDG 106 F+PDVI++ AA V + + P N G + +AA + + + ST V+ Sbjct: 77 EFAPDVIVHLAAQAGVRYSLENPRAYIESNVVGTFNVMEAARRHKVDHLLMASTSSVYGA 136 Query: 107 LSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E + PL IY SK A E SY + Y + T + ++++G Sbjct: 137 NEEMPFAETHKADTPLTIYAASKKANEAMGHSYAHLYDLPTTMFRFFTVYG 187 >gi|291280284|ref|YP_003497119.1| UDP-glucose 4-epimerase [Deferribacter desulfuricans SSM1] gi|290754986|dbj|BAI81363.1| UDP-glucose 4-epimerase [Deferribacter desulfuricans SSM1] Length = 342 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 6/107 (5%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F S+S D II+ AA V ++ + P + N + + A + G+ I+ ST V+ Sbjct: 71 FKSYSFDAIIHFAASIIVPESVENPLKYYMNNTVNTTNLIRLATNYGVERFIFSSTAAVY 130 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV--ASYTNN---YVILR 146 P+ E + +P+N YG SK+ E + + NN YVILR Sbjct: 131 GEPEEVPVKETTILSPINPYGMSKMMSERVLIDTAKANNDFKYVILR 177 >gi|163844971|ref|YP_001622626.1| hypothetical protein BSUIS_B0845 [Brucella suis ATCC 23445] gi|163675694|gb|ABY39804.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 336 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 74 FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 F +N G I KA D+ G ++ +TD ++ P E P PL YG SKL E Sbjct: 89 FPVNYYGTENIIKAMDAAGAKKLVHFTTDMLYGHTYVWPQKEDHPCKPLGEYGLSKLKTE 148 Query: 133 EKVASY 138 E A + Sbjct: 149 ELAAQW 154 >gi|332652994|ref|ZP_08418739.1| UDP-glucose 4-epimerase [Ruminococcaceae bacterium D16] gi|332518140|gb|EGJ47743.1| UDP-glucose 4-epimerase [Ruminococcaceae bacterium D16] Length = 330 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ F + +I+ AA + V ++ +P + N G + +A + G+ Sbjct: 50 LDIRDRSALDELFTKEKIEGVIHFAASSQVGESMSDPLKYYDNNLHGTMVLLQAMVAHGV 109 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + R PI E T+P N YG++KLA E + ++ YV LR Sbjct: 110 DKIVFSSTAATYGEPERVPILETDRTDPTNCYGETKLAMEHMMRWVSRAHGLKYVALR 167 >gi|298290101|ref|YP_003692040.1| dTDP-glucose 4,6-dehydratase [Starkeya novella DSM 506] gi|296926612|gb|ADH87421.1| dTDP-glucose 4,6-dehydratase [Starkeya novella DSM 506] Length = 354 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 19/123 (15%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---------- 84 D+ + F SF PD++++ AA + VD++ D P + N G + Sbjct: 62 DICDGRAFREALESFRPDLVMHLAAESHVDRSIDGPGDFIATNIVGTYTLLDEALRYWRG 121 Query: 85 AKAADSIGIPCIYISTDYVF-----DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 AA +ISTD VF DGL R E +P P + Y SK A + V ++ Sbjct: 122 LDAAAQKRFRFHHISTDEVFGTLGEDGLFR----EDTPYQPNSPYSASKAASDHLVRAWF 177 Query: 140 NNY 142 + Y Sbjct: 178 HTY 180 >gi|258648083|ref|ZP_05735552.1| dTDP-glucose 4,6-dehydratase [Prevotella tannerae ATCC 51259] gi|260851946|gb|EEX71815.1| dTDP-glucose 4,6-dehydratase [Prevotella tannerae ATCC 51259] Length = 372 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 16/124 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ K F + DV++N AA + VD++ + P++ N G + A Sbjct: 60 DIGDRKLVDDLFAKYHFDVVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDCARRDWVT 119 Query: 89 --DSIGIPCI-------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 D G P +STD V+ L T E +P P + Y SK + + V +Y Sbjct: 120 GKDEQGYPTWKTGVRFHQVSTDEVYGSLGDTGFFTEDTPLQPHSPYSASKTSADLVVCAY 179 Query: 139 TNNY 142 + Y Sbjct: 180 RDTY 183 >gi|255323439|ref|ZP_05364570.1| UDP-glucose 4-epimerase [Campylobacter showae RM3277] gi|255299476|gb|EET78762.1| UDP-glucose 4-epimerase [Campylobacter showae RM3277] Length = 328 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIS 99 D + F D II+ AA+ V ++ +P + N I G+ I+ S Sbjct: 61 DLSGIFAEGKFDAIIHFAAFIEVFESTQDPLKYYLNNTANVAKILTYCKQYGVNKFIFSS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 T V+ +DE + NP+N YG+SKL E + Y Sbjct: 121 TAAVYGEPEIGEVDEQTAANPINPYGRSKLMSEWIIKDY 159 >gi|170044588|ref|XP_001849924.1| UDP-glucose 4-epimerase [Culex quinquefasciatus] gi|167867678|gb|EDS31061.1| UDP-glucose 4-epimerase [Culex quinquefasciatus] Length = 351 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 4/127 (3%) Query: 9 NGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAED 68 N ++ +SL VQD+ V D+D+ F D + + AA AV ++ Sbjct: 43 NSKLPESLKR--VQDLTGKSVTFYDVDIRDKDGLREIFNKHKIDCVAHFAALKAVGESCR 100 Query: 69 EPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGK 126 P + N G + + A++ +Y S+ V+ + P+DE PT N YGK Sbjct: 101 IPLQYYQNNITGTSVLLEVMAEANVFSFVYSSSATVYGEPQKLPLDELHPTGSCTNPYGK 160 Query: 127 SKLAGEE 133 SK EE Sbjct: 161 SKYFTEE 167 >gi|94536900|ref|NP_001035389.1| UDP-glucose 4-epimerase [Danio rerio] gi|92096398|gb|AAI15184.1| UDP-galactose-4-epimerase [Danio rerio] Length = 349 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 13/124 (10%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++DLL F S +++ A AV ++ ++P + +N G + + S G Sbjct: 63 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHG 122 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKV-----ASYTNNY 142 + ++ S+ V+ + PIDE P TNP YGK+K EE + A N Sbjct: 123 VRNLVFSSSATVYGDPQKLPIDEQHPVGGCTNP---YGKTKYFIEEMIRDQCTAEKDWNA 179 Query: 143 VILR 146 V+LR Sbjct: 180 VLLR 183 >gi|307128063|ref|YP_003880094.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae 670-6B] gi|306485125|gb|ADM91994.1| UDP-glucose 4-epimerase [Streptococcus pneumoniae 670-6B] gi|332072206|gb|EGI82691.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA17545] Length = 233 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHYAGEIVVSESIENPSKYFTANVAGRNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +G I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGTQKIMFSSTASLYGNNCIDKPATEDTLIDPVNPYTETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|238026405|ref|YP_002910636.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1] gi|237875599|gb|ACR27932.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1] Length = 327 Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%) Query: 111 PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P+DE +P P + YG+SKL E E AS VI+R VY +SM+R Sbjct: 131 PLDERTPPAPEDAYGRSKLQAELALREYGASTGMEIVIVRPPLVYGAGVRANFMSMMR-- 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQI 195 V P A+ R+++ + Sbjct: 189 -------AVARGLPLPLGAITARRSLVHV 210 >gi|296536074|ref|ZP_06898209.1| UDP-glucose 4-epimerase [Roseomonas cervicalis ATCC 49957] gi|296263598|gb|EFH10088.1| UDP-glucose 4-epimerase [Roseomonas cervicalis ATCC 49957] Length = 324 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSR 109 D + N AA T+ + +P +INAE + A S G ++ ST + + Sbjct: 76 DAVFNMAAQTSHAGSMADPFTDLAINAEAQLRLIAALRQGSPGAVVVHASTRQFYGRPAY 135 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEE 133 P+DE P P + G SKLAGE+ Sbjct: 136 LPVDEKHPIAPPDANGVSKLAGEQ 159 >gi|218556351|ref|YP_002389265.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI1] gi|218363120|emb|CAR00760.1| dTDP-glucose 4,6-dehydratase [Escherichia coli IAI1] Length = 355 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + V ++ Sbjct: 118 TLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKAGSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|269925370|ref|YP_003321993.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] gi|269789030|gb|ACZ41171.1| NAD-dependent epimerase/dehydratase [Thermobaculum terrenum ATCC BAA-798] Length = 303 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ A + + P +SIN G + +A+ GI + G SR P Sbjct: 61 DFVVHAAGLHGIHLSTRSPREFYSINLTGTFNVWEASAQAGIKGFVFCSSVSVYGESRRP 120 Query: 112 --------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 + E P P +IYG +K GEE Y Y + A +F Sbjct: 121 PREDAVVALSENMPLLPSDIYGLTKFLGEEMSRYYVRRYGVPAVALRLGMF 171 >gi|184201692|ref|YP_001855899.1| GDP-mannose 4,6-dehydratase [Kocuria rhizophila DC2201] gi|183581922|dbj|BAG30393.1| GDP-mannose 4,6-dehydratase [Kocuria rhizophila DC2201] Length = 347 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 16/130 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N AA + V + DEPE G + +A G+ Sbjct: 65 DLSDAARLVTLMAEIDPDEVYNLAAQSHVRVSFDEPEHTGDTTGLGTVRLLEAVRRAGVK 124 Query: 95 CIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWV 150 C + ST +F G + P +E +P P + YG + K+ SY T NY R A Sbjct: 125 CRFYQASTSELF-GATPPPQNEDTPFYPRSPYGAA------KIYSYWITKNY---REA-- 172 Query: 151 YSIFGSNFLL 160 Y +F N +L Sbjct: 173 YDMFAVNGIL 182 >gi|45478496|gb|AAD45656.2|AF126256_1 FlmA [Aeromonas caviae] Length = 337 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALQCGVKEVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|298247870|ref|ZP_06971675.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297550529|gb|EFH84395.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 325 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 18/153 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEII-------------RVGRPDIDLLKPKDFAS 44 MK LV G G I ++ V+ +V ++ +V + +LL + Sbjct: 1 MKFLVTGGAGYIGSVMTKQLVEAGHEVTVLDNFTKGHHQAVLPQVKLVEGELLNAQRLKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F D +++ AA + V ++ +PE + N G + A G+ ++ ST V Sbjct: 61 VFKD-GFDGVLHFAALSLVGESVTQPERYYRNNVVGTLNLLDAMREAGVKRLVFSSTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + TPI E + P N YG SKLA ++ + Sbjct: 120 YGAPEETPILETAQPRPTNPYGGSKLAVDQMIG 152 >gi|293413232|ref|ZP_06655894.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B354] gi|291468180|gb|EFF10677.1| dTDP-glucose 4,6-dehydratase [Escherichia coli B354] Length = 355 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|227325828|ref|ZP_03829852.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 357 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ V D R +D+ + F ++ P ++++ AA + Sbjct: 31 VVVVDKLTYAGNLSSLAPVADSS--RFAFEQVDICDRAELDRVFTAYQPALVMHLAAESH 88 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRTP- 111 VD++ D P N G + +A AD +ISTD VF L T Sbjct: 89 VDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADADKRAFRFHHISTDEVFGDLHGTDD 148 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 149 LFTETTPYAPSSPYSASKASSDHLVRAWLRTY 180 >gi|118465647|ref|YP_881689.1| RmlD substrate binding domain-containing protein [Mycobacterium avium 104] gi|118166934|gb|ABK67831.1| RmlD substrate binding domain superfamily protein [Mycobacterium avium 104] Length = 366 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + PD +++ AA + + +P++A +N G + A ++ P Sbjct: 62 DLLDAEAVRDLVTAHQPDAVVHLAAVVS-PLSYRKPDLARRVNVGGTENLLAACTALPRP 120 Query: 95 CIYISTDYVFDGLSRTP------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++ SR P I +P NP++ YG+ K+ E + + Y + R Sbjct: 121 PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG 180 Query: 149 WV-----YSIFGSNFLLSMLRLAKERREISV 174 + ++ ++LL M + + R +V Sbjct: 181 GIISPDTHASINGDYLLLMRSMPSDNRMHAV 211 >gi|83950832|ref|ZP_00959565.1| UDP-glucose 4-epimerase [Roseovarius nubinhibens ISM] gi|83838731|gb|EAP78027.1| UDP-glucose 4-epimerase [Roseovarius nubinhibens ISM] Length = 307 Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 9/119 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL F ++ P +++ AA + V ++ +P + + N G+ + +AA + Sbjct: 31 DLLDRARLDEVFAAYQPSAVMHFAALSQVGESMVKPGLYWHNNVTGSLNLIEAA--VAAN 88 Query: 95 C---IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 C ++ ST + +DE +P+N YG SK A E+ + A++ +VI R Sbjct: 89 CQNFVFSSTCATYGDQDNVVLDEDCAQHPINAYGASKRAIEDILRDFEAAHGLRHVIFR 147 >gi|313673129|ref|YP_004051240.1| gdp-mannose 4,6-dehydratase [Calditerrivibrio nitroreducens DSM 19672] gi|312939885|gb|ADR19077.1| GDP-mannose 4,6-dehydratase [Calditerrivibrio nitroreducens DSM 19672] Length = 394 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL + S PD I N AA + V + ++PE I+A G + +A +G+ Sbjct: 65 DLTDSLNVTSVIQKVKPDEIYNLAAQSHVAVSFEQPEYTAQIDALGTLRVLEAVRLLGLI 124 Query: 94 --PCIY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY ST ++ + P DE +P P + YG +K+ +Y +Y Sbjct: 125 DKTKIYQASTSELYGKVQAIPQDEKTPFYPRSPYGAAKIYAYWITVNYRESY 176 >gi|300172674|ref|YP_003771839.1| UDP-glucose 4-epimerase [Leuconostoc gasicomitatum LMG 18811] gi|299887052|emb|CBL91020.1| UDP-glucose 4-epimerase [Leuconostoc gasicomitatum LMG 18811] Length = 330 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 17/153 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ + Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVESGRDVVVVDALFTGHRDAVNPAAKFYQVDIRNKTALSD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + +++ AA++ V ++ P F N G + + + I + ST Sbjct: 61 VFDKENIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKDHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + PI E P NP+N YG+SKL E+ +A Sbjct: 121 YGNPVNIPIKETDPQNPINPYGESKLMMEKIMA 153 >gi|473600|gb|AAA21344.1| dTDP-glucose dehydratase [Streptomyces fradiae] Length = 333 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%) Query: 30 GRPDIDLLKPKDFASFF----LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 G PD++ ++ D A L ++++ AA + VD++ + E N EG + Sbjct: 53 GHPDLEFVR-GDIADHGWWRRLMEGVGLVVHFAAESHVDRSIESSEAFVRTNVEGTRVLL 111 Query: 86 KAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +AA G+ ++ISTD V+ ++ E P P + Y +K A + +Y Y Sbjct: 112 QAAVDAGVGRFVHISTDEVYGSIAEGSWPEDHPVAPNSPYAATKAASDLLALAYHRTY 169 >gi|332298847|ref|YP_004440769.1| UDP-N-acetylglucosamine 4-epimerase [Treponema brennaborense DSM 12168] gi|332181950|gb|AEE17638.1| UDP-N-acetylglucosamine 4-epimerase [Treponema brennaborense DSM 12168] Length = 360 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFS-INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 DV+IN AA D P+ + +N G+ I A +GI + ++ G + Sbjct: 91 DVVINLAAEHRDDVT---PKSLYDDVNVHGSENICNACSKLGIHKVIFTSSVAIYGFAPV 147 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY-----TNNYVILRTAWVYSIFGSNFLLSMLR 164 DE N N YG++K EEK + N+ VI+R ++ + ++LR Sbjct: 148 GTDESGKINYFNDYGRTKYLAEEKYREWFKKDAANSAVIIRPTVIFGEQNRGNVYNLLR 206 >gi|269793217|ref|YP_003318121.1| dTDP-glucose 4,6-dehydratase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100852|gb|ACZ19839.1| dTDP-glucose 4,6-dehydratase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 359 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 11/103 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIPCIYIST 100 P I++ AA + VD++ D PE N G + A + +++ST Sbjct: 77 PSGILHLAAESHVDRSIDGPEEFIQTNIVGTHRLLVATLTFWKSLPEPEKASFRFLHVST 136 Query: 101 DYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D VF L + EF+P +P + Y SK + + V +Y + Y Sbjct: 137 DEVFGSLGPEGLFHEFTPYDPRSPYSASKASSDHLVRAYGHTY 179 >gi|227833287|ref|YP_002834994.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] gi|262184272|ref|ZP_06043693.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] gi|227454303|gb|ACP33056.1| UDP-glucose 4-epimerase [Corynebacterium aurimucosum ATCC 700975] Length = 327 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + ++ PI E PT P N YG SKLA + + SY Y + T+ Y Sbjct: 110 LVFSSTAATYGEPAQVPITETMPTQPTNPYGASKLAIDYMITSYAQAYGLGATSLRY 166 >gi|158333604|ref|YP_001514776.1| dTDP-glucose 4,6-dehydratase [Acaryochloris marina MBIC11017] gi|158303845|gb|ABW25462.1| dTDP-glucose 4,6-dehydratase, putative [Acaryochloris marina MBIC11017] Length = 355 Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIP 94 + P I+N AA T VD++ D P+ N G + + A+ Sbjct: 68 LLTQYRPRAILNFAAETHVDRSIDGPDAFIQTNIVGTFNLLETVRSYWQNLSVAERNSFR 127 Query: 95 CIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD VF LS P E + P + Y SK + + V SY + Y Sbjct: 128 FLHVSTDEVFGTLSAVDPPFSESTAYAPNSPYSASKASSDHLVRSYFHTY 177 >gi|315641566|ref|ZP_07896635.1| UDP-glucose 4-epimerase [Enterococcus italicus DSM 15952] gi|315482703|gb|EFU73230.1| UDP-glucose 4-epimerase [Enterococcus italicus DSM 15952] Length = 331 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F S + +I+ AA + V ++ + P + F N G + G+ ++ ST Sbjct: 60 SVFKKESIEGVIHFAASSLVGESMERPLLYFDNNVYGTLVTLEVMHEYGVKRIVFSSTAA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 + + TPI E P +P N YG+SK E + +Y YV LR Sbjct: 120 TYGEPNETPITENMPASPKNPYGESKRMMENMMRWCDEAYGIRYVALR 167 >gi|148656508|ref|YP_001276713.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] gi|148568618|gb|ABQ90763.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1] Length = 349 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 18/171 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRV----------GRPDIDLLK-PKDFASFFLS 48 M+ LV G+ G I L+ M ++ E+I + G P +++ + KD S Sbjct: 1 MRVLVTGHKGYIGTVLTPMLLERGYEVIGLDSDLFEDCTFGEPPVEVPEIRKDIRDVEAS 60 Query: 49 --FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +++ A + + +P++ + IN + +A A GI I+ S+ + Sbjct: 61 DLHGVDAVMHLAGLSNDPLGDLDPQLTYEINYLASVRLAMLARQAGIKRFIFSSSCSTYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSI 153 +DE S NP+ YG+SK+ E+ +A + + LR A Y + Sbjct: 121 AAGDDMLDETSSFNPVTPYGRSKVLVEQDLAKLADADFSPTYLRNATAYGV 171 >gi|114046891|ref|YP_737441.1| polysaccharide biosynthesis protein CapD [Shewanella sp. MR-7] gi|113888333|gb|ABI42384.1| polysaccharide biosynthesis protein CapD [Shewanella sp. MR-7] Length = 337 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALQCGVKDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLTS-DKLFTAANN 155 >gi|331685507|ref|ZP_08386091.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H299] gi|331077208|gb|EGI48422.1| dTDP-glucose 4,6-dehydratase [Escherichia coli H299] Length = 355 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFVETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|289643796|ref|ZP_06475904.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] gi|289506402|gb|EFD27393.1| NAD-dependent epimerase/dehydratase [Frankia symbiont of Datisca glomerata] Length = 331 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 17/175 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 +V+ + A + VD A +P +N EG + +AA G+ ++ ST +V+ Sbjct: 62 EVVFHLAGMSNVDHAFADPIRTVRLNVEGTANVCEAARVAGVRRVLFASTVWVYGAAGGD 121 Query: 111 PID--------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNF--- 158 P D EF+ ++Y +K+A E + SY Y + T Y I +G Sbjct: 122 PDDPHPLTEDVEFALVRAGHVYTSTKIAAELLLHSYQQTYGVDFTILRYGIPYGPGMRDE 181 Query: 159 --LLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 L LR A + +++ D QF +A A + + N+ +L G Sbjct: 182 LVLARFLRKALDGEPLTIAGDGQQFRNYVFVRDLADAHVLALADSARNATIALEG 236 >gi|154299682|ref|XP_001550259.1| hypothetical protein BC1G_11467 [Botryotinia fuckeliana B05.10] gi|150857157|gb|EDN32349.1| hypothetical protein BC1G_11467 [Botryotinia fuckeliana B05.10] Length = 375 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 12/152 (7%) Query: 1 MKCLVIGNNGQIAQSL---SSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSP-DV 53 + L G N I SL S + + +E + RPD +D+ + F + D Sbjct: 21 LALLEHGYNVVIVDSLYNSSVVALDRIETLCGKRPDFYQVDITDEAELEKVFAAHPKIDS 80 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTP- 111 +I+ AA AV ++ + P + +N G ++ + + I + S+ V+ +R P Sbjct: 81 VIHFAALKAVGESSEIPLEYYRVNVGGTISLLRCMSKYDVTNIVFSSSATVYGDATRVPN 140 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 I E P P N YG++K E+ + + N Sbjct: 141 MIPIPEHCPIGPTNPYGRTKSTIEDVITDHVN 172 >gi|149011268|ref|ZP_01832515.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP19-BS75] gi|147764258|gb|EDK71189.1| NAD-dependent epimerase/dehydratase family protein [Streptococcus pneumoniae SP19-BS75] gi|332073018|gb|EGI83498.1| short chain dehydrogenase family protein [Streptococcus pneumoniae GA41301] Length = 233 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 7/129 (5%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ++D+ ++ D +++ A V ++ + P F+ N G + K Sbjct: 46 RASFKELDVYDASALKAYLEENQIDAVLHYAGEIVVSESIENPSKYFTANVAGRNQVLKV 105 Query: 88 ADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 +G I S+ G + P E + +P+N Y ++KL GE + N Y Sbjct: 106 LSEVGTQKIMFSSTASLYGNNCIDKPATEDTLIDPVNPYTETKLMGERMIYWMANRY--- 162 Query: 146 RTAWVYSIF 154 W Y IF Sbjct: 163 --DWKYVIF 169 >gi|33637050|gb|AAQ23687.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 337 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 S DVI+N AA + VD++ +P + N G + A + I + ISTD V+ Sbjct: 72 SHHIDVIVNFAAESHVDRSISDPSVFVKTNVLGTQVLLDVAKANSIQKYVQISTDEVYGS 131 Query: 107 LSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L T E +P P + Y SK + + V +Y Y Sbjct: 132 LGDTGYFTEETPLAPNSPYSASKASADLLVRAYHETY 168 >gi|15892379|ref|NP_360093.1| putative dTDP-4-dehydrorhamnose reductase. [Rickettsia conorii str. Malish 7] gi|15619528|gb|AAL02994.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia conorii str. Malish 7] Length = 284 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLNSDKKFDIFATARNNSARSYFSKDLSDKLITNVDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G + E ++ ++YG+SKL GE Sbjct: 121 CVFSG-KKGHYKESDFSDCYDLYGRSKLLGE 150 >gi|298387546|ref|ZP_06997098.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. 1_1_14] gi|298259753|gb|EFI02625.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacteroides sp. 1_1_14] Length = 340 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVII+ AA VD AE PE N GA + KAA + + + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPEECIKTNVHGAQNVIKAALANNVHDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 P+N+YG +KL ++ Sbjct: 131 -----KACAPINLYGATKLTSDK 148 >gi|150020972|ref|YP_001306326.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] gi|149793493|gb|ABR30941.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] Length = 321 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D++LL + F + D +++ AY V ++ +P+ + N + K Sbjct: 53 DVELLD-----NIFKHYHIDAVMHFCAYIEVGESVVDPQKYYENNVGNTIKLLKVMRKNN 107 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I I+ ST V+ + PI E +P+N YGKSK E+ + Y Y Sbjct: 108 IDKFIFSSTAAVYGMPEKVPIKEDDKKDPINPYGKSKWMVEQMLEDYDKAY 158 >gi|16519748|ref|NP_443868.1| dTDP-glucose 4,6-dehydratase RmlB [Sinorhizobium fredii NGR234] gi|2494671|sp|P55462|RFBB_RHISN RecName: Full=Probable dTDP-glucose 4,6-dehydratase gi|2182408|gb|AAB91680.1| dTDP-glucose 4,6-dehydratase RmlB [Sinorhizobium fredii NGR234] Length = 350 Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 33/175 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGR----PDIDLLKPKD-------------- 41 M+ LV G G I +L V + E++ V + ++ LKP + Sbjct: 1 MRILVTGGAGFIGSALVRYLVSINAEVLNVDKLTYAGNLASLKPVEGLRNYRFLRADICD 60 Query: 42 ---FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG------ 92 F +F PD +I+ AA + VD++ + N G + + A Sbjct: 61 RVAINEAFETFQPDYVIHLAAESHVDRSITGADDFVQTNVNGTFTMLETARQYWSNLSQN 120 Query: 93 ----IPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L R +E SP +P + Y SK A + ++ Y Sbjct: 121 RKAFFKMLHVSTDEVYGSLGDRGQFEEVSPYDPSSPYSASKAASDHFATAWQRTY 175 >gi|224117864|ref|XP_002317687.1| predicted protein [Populus trichocarpa] gi|222860752|gb|EEE98299.1| predicted protein [Populus trichocarpa] Length = 417 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 12/130 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAADSI 91 DL PK F + D +++ AA V ++ EP + + N + A AA+ + Sbjct: 130 DLGDPKTVNIIFSQNAFDAVMHFAAVAYVGESTMEP-LKYYHNITSNTLVVLEAMAANDV 188 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRT 147 IY ST + + PI E +P P+N YGK+K E+ + ++ N +ILR Sbjct: 189 KT-LIYSSTCATYGEPEKMPITEVTPQVPINPYGKAKKMAEDIILDFSKNSDMAIMILR- 246 Query: 148 AWVYSIFGSN 157 +++ GS+ Sbjct: 247 --YFNVIGSD 254 >gi|90414185|ref|ZP_01222166.1| putative UDP-glucose 4-epimerase [Photobacterium profundum 3TCK] gi|90324735|gb|EAS41273.1| putative UDP-glucose 4-epimerase [Photobacterium profundum 3TCK] Length = 338 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ A AV ++ +P + N G + +A + G+ I+ S+ V+ + Sbjct: 75 DAVIHFAGLKAVGESVVKPLEYYDNNVHGTLVLVEAMRAAGVNSLIFSSSATVYGDPASV 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E PT+ N YG+SKL EE Sbjct: 135 PITEGFPTSATNPYGRSKLMVEE 157 >gi|238789363|ref|ZP_04633149.1| dTDP-glucose 4,6-dehydratase [Yersinia frederiksenii ATCC 33641] gi|238722506|gb|EEQ14160.1| dTDP-glucose 4,6-dehydratase [Yersinia frederiksenii ATCC 33641] Length = 327 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 13/151 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +V+ + A +L S+ V + R +D+ + F + PD +++ AA + V Sbjct: 1 MVVVDKLTYAGNLESLAVV-AQSERYAFERVDICDRAELDRVFAQYQPDAVMHLAAESHV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAAD----------SIGIPCIYISTDYVFDGLSRTP-- 111 D++ D P N G + +AA + +ISTD V+ L T Sbjct: 60 DRSIDGPAAFVETNIMGTYQMLEAARHYWQQLSAEAKLAFRFHHISTDEVYGDLHGTDDL 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 120 FTETTPYAPSSPYSASKASSDHLVRAWLRTY 150 >gi|313117360|ref|YP_004044343.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] gi|312294251|gb|ADQ68682.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] Length = 307 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D ++N AA + VD++ + + N +G + AA GI + ISTD V+ + Sbjct: 73 DTVVNFAAESHVDRSIEGAKPFVETNVQGTQTLLDAAKDSGIERFLQISTDEVYGQILDG 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 E P NP N Y +K + + S+ + +I RT Sbjct: 133 KFSEDDPLNPRNPYSATKASADHLAKSFETTHDLPVLITRT 173 >gi|170759694|ref|YP_001788040.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406683|gb|ACA55094.1| NAD-dependent epimerase/dehydratase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 354 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 PC +++ST V+D IDE P++ YG +K+A E V SY N Y V++R Sbjct: 153 PCKVVFMSTCMVYDKAPEVGIDEEYRVKPISPYGGAKIAAENMVLSYYNAYKLPTVVIRP 212 Query: 148 AWVYSIF 154 Y F Sbjct: 213 FNTYGPF 219 >gi|159897768|ref|YP_001544015.1| dTDP-glucose 4,6-dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159890807|gb|ABX03887.1| dTDP-glucose 4,6-dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 364 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIA---FSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGL 107 +++++ AA T VD++ E E+ + N EG ++ +A+ G+ + +STD VF L Sbjct: 74 NLVVHFAAETHVDRSLGEFEMERQFYRSNIEGTASLLRASREAGVGHFHHVSTDEVFGDL 133 Query: 108 SRTPIDEFS---PTNPLNIYGKSKLAGEEKVASYTNNY 142 +F P NP + Y SK A + V ++ + + Sbjct: 134 DFDDPQKFHETYPYNPSSPYAVSKAASDHVVRAFAHTH 171 >gi|77164291|ref|YP_342816.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|254434039|ref|ZP_05047547.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani AFC27] gi|76882605|gb|ABA57286.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani ATCC 19707] gi|207090372|gb|EDZ67643.1| dTDP-glucose 4,6-dehydratase [Nitrosococcus oceani AFC27] Length = 358 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 11/112 (9%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSI 91 F + P +++ AA + VD++ D P N G + +AA Sbjct: 68 MTQIFARYQPGAVLHLAAESHVDRSIDNPAAFIDTNVTGTYILLEAALDYWRKLDKSAQA 127 Query: 92 GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD VF L T + E SP P + Y SK A + V ++ + Y Sbjct: 128 RFRFHHISTDEVFGSLGATGLFREDSPYQPNSPYAASKAASDHLVRAWYHTY 179 >gi|33240764|ref|NP_875706.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33238293|gb|AAQ00359.1| NAD dependent epimerase/dehydratase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 341 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 11/151 (7%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 Q +S S +++ ++G +ID +K F SP +++N AA V + D P Sbjct: 48 QYIESSSQEYLKNWVFHKLGIENIDEIK-----EIFTKESPRIVVNLAAQAGVRYSLDNP 102 Query: 71 EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSK 128 N G + + + IY S+ V+ G + P +E N P++ Y +K Sbjct: 103 HAYVQSNLVGFCNLLEMCRHYEVENLIYASSSSVYGGNTNLPFNETQAVNHPVSFYAATK 162 Query: 129 LAGEEKVASYTNNYVI----LRTAWVYSIFG 155 + E +Y++ Y + LR VY +G Sbjct: 163 KSNELMAHTYSHLYDLPATGLRFFTVYGPWG 193 >gi|262276762|ref|ZP_06054555.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium HIMB114] gi|262223865|gb|EEY74324.1| dTDP-glucose 4,6-dehydratase [alpha proteobacterium HIMB114] Length = 341 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 12/117 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-----AD 89 D+ K + F P I N AA T VD++ D+P N G + + Sbjct: 59 DINNGKKISKILNQFKPVAIFNLAAETHVDRSIDDPSSFIQSNINGVFQLLEQFKKFNKK 118 Query: 90 SIGIPCIYISTDYVFDGLSR----TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S ++ISTD V+ + + D + P++P Y SK A + + SY Y Sbjct: 119 SKKSKFLHISTDEVYGDIPKKKYSVETDSYKPSSP---YAASKAASDHLIKSYIRTY 172 >gi|269929115|ref|YP_003321436.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] gi|269788472|gb|ACZ40614.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM 20745] Length = 294 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+D+ P+ S + PD II+ AA +V ++ +P+ ++N G + A G Sbjct: 49 DMDVADPRTV-SAIAALRPDGIIHGAAQVSVPRSMADPDRDRAVNVVGTAHVLAGAREAG 107 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P +++ST G S DE + P + Y K E + Y I R A VY Sbjct: 108 SPRVVFLSTGGGIYGESDG-ADEMTLPQPKSYYSAHKYLAERYLEYSGLPYAIARLANVY 166 Query: 152 S 152 Sbjct: 167 G 167 >gi|229082487|ref|ZP_04214950.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus Rock4-2] gi|228700919|gb|EEL53442.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus Rock4-2] Length = 564 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 18/108 (16%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 P V+ + AA+ V E PE A N G +A+AAD+ GI + +STD Sbjct: 314 KPFVVYHAAAHKHVPLMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTD------- 366 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K E V +I +T +V FG+ Sbjct: 367 -------KAVNPTNVMGATKRVAEMVVQHMA---MISQTRFVAVRFGN 404 >gi|296125327|ref|YP_003632579.1| dTDP-glucose 4,6-dehydratase [Brachyspira murdochii DSM 12563] gi|296017143|gb|ADG70380.1| dTDP-glucose 4,6-dehydratase [Brachyspira murdochii DSM 12563] Length = 351 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 7/116 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +++ K S F + PD +++ AA + VD++ P+ N G + +AA ++ Sbjct: 65 VNICDAKKVNSIFQKYKPDCVVHFAAESHVDRSIFGPKNFVETNIIGTFTLLEAARNLWK 124 Query: 92 ----GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +ISTD V+ LS T E + +P + Y SK + + V +Y + Y Sbjct: 125 DNADGKLFHHISTDEVYGSLSDTGYFYETTAYDPRSPYSASKASSDHIVKAYYHTY 180 >gi|54302662|ref|YP_132655.1| putative UDP-glucose 4-epimerase [Photobacterium profundum SS9] gi|46916086|emb|CAG22855.1| putative UDP-glucose 4-epimerase [Photobacterium profundum SS9] Length = 338 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ A AV ++ +P + N G + +A + G+ I+ S+ V+ + Sbjct: 75 DAVIHFAGLKAVGESVVKPLEYYDNNVHGTLVLVEAMRTAGVNSLIFSSSATVYGDPASV 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E PT+ N YG+SKL EE Sbjct: 135 PITENFPTSATNPYGRSKLMVEE 157 >gi|225352533|ref|ZP_03743556.1| hypothetical protein BIFPSEUDO_04156 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156727|gb|EEG70121.1| hypothetical protein BIFPSEUDO_04156 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 341 Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + PE + N EG + +AA + +ISTD V+ L+ Sbjct: 82 DAIVHFAAESHNDNSIANPEPFITTNVEGTFHLLEAARKHDVRFHHISTDEVYGDLALDD 141 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P P + Y SK A ++ V ++ Y + T Sbjct: 142 PCKFTESTPYKPSSPYSASKAASDQLVRAWVRTYGLRAT 180 >gi|291335475|gb|ADD95087.1| GDP mannose 4 6 dehydratase [uncultured phage MedDCM-OCT-S04-C348] Length = 338 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 9/110 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I N AA + V + P +NA G I +A ++G ST +F + Sbjct: 78 PDEIYNLAAQSHVGVSFKSPASTAHVNALGVLNILEACRNVGARFYQASTSEMFGKVQEV 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 P E + P + YG +KL G +Y + Y +FG N +L Sbjct: 138 PQHEETNFYPRSPYGVAKLFGYWLTVNYRES---------YGLFGCNGIL 178 >gi|238794279|ref|ZP_04637892.1| dTDP-glucose 4,6-dehydratase [Yersinia intermedia ATCC 29909] gi|238726363|gb|EEQ17904.1| dTDP-glucose 4,6-dehydratase [Yersinia intermedia ATCC 29909] Length = 339 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + PD++++ AA + VD++ D P N G + +AA Sbjct: 42 VDICDRAELDRVFAHYQPDMVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 101 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 102 QLSAEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 161 Query: 142 Y 142 Y Sbjct: 162 Y 162 >gi|238798900|ref|ZP_04642366.1| dTDP-glucose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] gi|238717254|gb|EEQ09104.1| dTDP-glucose 4,6-dehydratase [Yersinia mollaretii ATCC 43969] Length = 339 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ F + PDV+++ AA + VD++ D P N G + +A Sbjct: 36 RYAFEQVDICDRAALDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYLMLEA 95 Query: 88 AD----------SIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 96 ARHYWQQLSAEAKLAFRFHHISTDEVYGDLHGTEDLFTETTPYAPSSPYSASKASSDHLV 155 Query: 136 ASYTNNY 142 ++ Y Sbjct: 156 RAWLRTY 162 >gi|226366203|ref|YP_002783986.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] gi|226244693|dbj|BAH55041.1| UDP-glucose 4-epimerase [Rhodococcus opacus B4] Length = 330 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 14/101 (13%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------A 148 ++ ST + +PI E PT P N YG +KLA + + SY+ + + T A Sbjct: 114 VFSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVA 173 Query: 149 WVYSIFGSNFLLS------MLRLAKERRE-ISVVCDQFGTP 182 Y G N ++ +L++A +RE IS+ + TP Sbjct: 174 GAYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTP 214 >gi|169836771|ref|ZP_02869959.1| dTDP-glucose 4,6-dehydratase [candidate division TM7 single-cell isolate TM7a] Length = 365 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 23/118 (19%) Query: 7 GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 GN G IA + RV +D+ ++ A F D ++N AA + VD++ Sbjct: 6 GNLGTIANEIKDE--------RVKFEKVDIRDQREIARIFSENEVDFVVNFAAESHVDRS 57 Query: 67 EDEPEIAFSI----------NAEGAGAIAKAADSI-----GIPCIYISTDYVFDGLSR 109 + P+I NA+ A IAK + G+ + +STD V+ LS+ Sbjct: 58 IENPQIFLETNILGTQNLLENAKKAWTIAKDENGYPVYKDGVKYLQVSTDEVYGSLSK 115 >gi|146341727|ref|YP_001206775.1| putative sugar nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS278] gi|146194533|emb|CAL78558.1| putative sugar nucleotide epimerase/dehydratase [Bradyrhizobium sp. ORS278] Length = 345 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 13/152 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I AA + ++ IN ++A+AA + G+ ++ S+ V+ Sbjct: 71 DAVIQLAAISNDPMGNRFQDVTLDINQRTTVSLARAAAAAGVKNFVFASSCSVYGIADGP 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL----- 165 P E P NP+ Y KSK+ E+++A + I + + S+ L L L Sbjct: 131 PRKESDPLNPITAYAKSKIGSEQELARIETDMAITCLRFATACGMSDRLRLDLVLNDFVA 190 Query: 166 -AKERREISVVCDQFGTPTSAL----QIARAI 192 A RR+ISV+ D GTP L +ARAI Sbjct: 191 CALSRRQISVLSD--GTPWRPLIDVADMARAI 220 >gi|329766632|ref|ZP_08258175.1| Nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136887|gb|EGG41180.1| Nucleoside-diphosphate-sugar epimerase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 168 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF--DGLSR 109 D++I+ AA +V+++ P F +N +G I + + I +++ +G Sbjct: 70 DMVIHLAAKISVEESLKNPTETFRVNVDGTKNILFSCKKNNVKKIIVASSAAVYGEGSPN 129 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKV 135 + E S TNP++ YG+SK+ E+++ Sbjct: 130 VKLTEKSKTNPISPYGESKIKMEDEI 155 >gi|260886157|ref|ZP_05897437.1| putative epimerase/dehydratase WbiI [Prevotella tannerae ATCC 51259] gi|260850804|gb|EEX70673.1| putative epimerase/dehydratase WbiI [Prevotella tannerae ATCC 51259] Length = 552 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 68/185 (36%), Gaps = 44/185 (23%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRP-----DIDLLKPKDFA----------- 43 + L+ G+ G I + ++ E++ + + DI LL DFA Sbjct: 208 RVLITGSAGSIGSEMVRQISLLKPAELMLIDQAETPQHDIRLLMLHDFAGIKVSTIVTSI 267 Query: 44 -------SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PC 95 F +F PD + + AAY V ED P + N G IA + G+ Sbjct: 268 TNEIRMEKIFSAFRPDYVFHAAAYKHVPMMEDNPSESILNNVNGTKIIADLSVKFGVKKF 327 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY----TNNYVILRTAWVY 151 + +STD NP N+ G SK E V S N V T +V Sbjct: 328 VMVSTD--------------KAVNPTNVMGCSKRICEIYVQSLDKAEKENKVKGTTQFVT 373 Query: 152 SIFGS 156 + FG+ Sbjct: 374 TRFGN 378 >gi|182415753|ref|YP_001820819.1| GDP-mannose 4,6-dehydratase [Opitutus terrae PB90-1] gi|177842967|gb|ACB77219.1| GDP-mannose 4,6-dehydratase [Opitutus terrae PB90-1] Length = 328 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIG 92 DL + PD I N AA + V + D PE I GA I +A IG Sbjct: 64 DLADSVSLVKLLYALQPDEIYNLAAQSHVRVSFDVPEYTADITGVGAARILEAIIESGIG 123 Query: 93 IPCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 Y S+ +F + P E +P P + YG +K+ +Y +Y Sbjct: 124 KKVRYYQASSSEMFGKVQEVPQRETTPFYPRSPYGCAKVFAHWLTVNYRESY 175 >gi|297618770|ref|YP_003706875.1| NAD-dependent epimerase/dehydratase [Methanococcus voltae A3] gi|297377747|gb|ADI35902.1| NAD-dependent epimerase/dehydratase [Methanococcus voltae A3] Length = 330 Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 4/45 (8%) Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 PIDE P L+ YG SK+ GEE + Y+ +Y ILR A VY Sbjct: 156 PIDENHPLKALSPYGLSKITGEEYIKLYSELYGIDYTILRYANVY 200 >gi|329925176|ref|ZP_08280119.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] gi|328940009|gb|EGG36342.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. HGF5] Length = 328 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ +PE+ N G + + G+ + +STD V+ L T Sbjct: 75 DAVVNFAAESHVDRSILQPELFVLTNVAGTQTLLDLSRQYGVGKFVQVSTDEVYGTLGAT 134 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASY 138 + E SP P + Y SK + V +Y Sbjct: 135 GLFTEESPLQPNSPYSASKAGADLMVRAY 163 >gi|295425264|ref|ZP_06817967.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] gi|295065040|gb|EFG55945.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] Length = 306 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 D +++ AAY+ V ++ P + N G ++ +A + G + S+ G+ + Sbjct: 68 DAVMHFAAYSLVPESVKRPLKYYDNNVNGMISLLRAMNDAGTKYLIFSSSAATYGVPKKL 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA 136 PI E +P +P+N YG++K+ E+ +A Sbjct: 128 PITEDTPLDPINPYGETKMMMEKIMA 153 >gi|218296609|ref|ZP_03497327.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] gi|218242922|gb|EED09455.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] Length = 310 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 23/175 (13%) Query: 1 MKCLVIGNNG----QIAQSL----------SSMCVQDVEIIRVGRP--DIDLLKPKDFAS 44 M+ L+ G G IA++L ++ E + G P +DL + Sbjct: 1 MRVLITGGAGFIGSHIAEALLREGLEVAVLDNLSTGKRENVPPGVPFYQVDLRDGEGVER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F P + + AA +V + ++P + F++N G + +A G+ ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACRRHGVEKLVFASTGGA 120 Query: 104 FDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 G +E P P + Y SK A E +++Y NY V LR VY Sbjct: 121 IYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLRWVSLRYGNVYG 175 >gi|111023767|ref|YP_706739.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1] gi|110823297|gb|ABG98581.1| UDP-galactose 4-epimerase [Rhodococcus jostii RHA1] Length = 330 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 14/101 (13%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-------A 148 ++ ST + +PI E PT P N YG +KLA + + SY+ + + T A Sbjct: 114 VFSSTAATYGEPEHSPITEADPTRPTNPYGATKLAIDHAITSYSVAHSLAATSLRYFNVA 173 Query: 149 WVYSIFGSNFLLS------MLRLAKERRE-ISVVCDQFGTP 182 Y G N ++ +L++A +RE IS+ + TP Sbjct: 174 GAYKSAGENRVVETHLIPLVLQVALGQREKISIFGTDWPTP 214 >gi|78049265|ref|YP_365440.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037695|emb|CAJ25440.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 351 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 11/103 (10%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYIST 100 PD ++N AA + VD++ D P N G A+ +A A +++ST Sbjct: 74 PDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLALLEAVRDYWKALPDASRDAFRFLHVST 133 Query: 101 DYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 134 DEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|327313558|ref|YP_004328995.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola F0289] gi|326944354|gb|AEA20239.1| dTDP-glucose 4,6-dehydratase [Prevotella denticola F0289] Length = 384 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 16/114 (14%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPCI 96 F D ++N AA + VD++ ++P++ S+N G + AA D G P Sbjct: 73 LFAENDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGKDGQGYPTW 132 Query: 97 -------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P +P + Y SK + + V +Y + Y Sbjct: 133 KAGKRYHQVSTDEVYGSLGAEGYFTEQTPLSPHSPYSASKTSADHFVMAYRDTY 186 >gi|30023306|ref|NP_834937.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacillus cereus ATCC 14579] gi|229130523|ref|ZP_04259479.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus BDRD-Cer4] gi|29898867|gb|AAP12138.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacillus cereus ATCC 14579] gi|228652862|gb|EEL08744.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus BDRD-Cer4] Length = 593 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 18/108 (16%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 P V+ + AA+ V E PE A N G +A+AAD+ GI + +STD Sbjct: 343 KPFVVYHAAAHKHVPLMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTD------- 395 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K E V +I +T +V FG+ Sbjct: 396 -------KAVNPTNVMGATKRVAEMVVQHMA---MISQTRFVAVRFGN 433 >gi|17232205|ref|NP_488753.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7120] gi|17133850|dbj|BAB76412.1| UDP-glucose 4-epimerase [Nostoc sp. PCC 7120] Length = 332 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 11/114 (9%) Query: 31 RPDID-LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 RP +D L K + F D +++ +AY V ++ +P + N G + +A Sbjct: 62 RPLLDELFKSRHF---------DAVMHFSAYAYVGESVSDPAKYYRNNVLGTLTLLEAML 112 Query: 90 SIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + I S+ G+ +T PI E P NP+N YG +KL E +A + Y Sbjct: 113 AASINKFVFSSTCATYGVPKTVPIPEDHPQNPINPYGATKLMVERILADFDVAY 166 >gi|325969726|ref|YP_004245918.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323708929|gb|ADY02416.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 318 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 4/58 (6%) Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFG-SNFLLSMLRLAK 167 ++S NP + Y +SK GE + +N NYVI+R VY + N LS+ RLAK Sbjct: 137 DYSYVNPRSDYERSKCDGERTIKEISNEGLNYVIIRPTLVYGYYNDHNEFLSLYRLAK 194 >gi|320538454|ref|ZP_08038321.1| UDP-glucose 4-epimerase [Treponema phagedenis F0421] gi|320144716|gb|EFW36465.1| UDP-glucose 4-epimerase [Treponema phagedenis F0421] Length = 325 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIG-IPCIYIST 100 A+F F V + AA+ AV ++ ++PE +SIN A I AA G + ++ S+ Sbjct: 60 AAFARGFDGAVYL--AAFKAVGESMEKPE-KYSINNISATMNILNAAVKYGCLRFVFSSS 116 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 V+ PIDE P NP + YG +KL EE + Y Sbjct: 117 AAVYGSPQYLPIDEKHPKNPESYYGFTKLKTEEFLQWY 154 >gi|227487173|ref|ZP_03917489.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541659|ref|ZP_03971708.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51866] gi|227092831|gb|EEI28143.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182627|gb|EEI63599.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glucuronolyticum ATCC 51866] Length = 327 Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AA + D + +P N EG IA A + +ISTD V+ L T Sbjct: 68 DVVVHFAAESHNDNSLRDPLAFVRTNVEGTTVIAAACARHDVRLHHISTDEVYGDLPLTG 127 Query: 112 IDEFSPTNPL---NIYGKSKLAGEEKVASYTNNYVILRT 147 + F+P P + Y SK + + V ++ ++ + T Sbjct: 128 GERFTPDTPYRPSSPYSASKASADHIVRAFGRSFGLRAT 166 >gi|304310334|ref|YP_003809932.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] gi|301796067|emb|CBL44271.1| UDP-glucose 4-epimerase [gamma proteobacterium HdN1] Length = 335 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + N +G + +A S G+ ++ S+ V+ + P+ Sbjct: 77 VIHFAGLKAVGESVEQPLRYYDNNVQGTLCLLRAMGSCGVKTLVFSSSATVYGEPQQLPL 136 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E P + N YG+SKL EE Sbjct: 137 VESHPLSATNPYGRSKLMIEE 157 >gi|297520837|ref|ZP_06939223.1| dTDP-glucose 4,6-dehydratase [Escherichia coli OP50] Length = 327 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|253575630|ref|ZP_04852966.1| UDP-N-acetylglucosamine 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844968|gb|EES72980.1| UDP-N-acetylglucosamine 4,6-dehydratase [Paenibacillus sp. oral taxon 786 str. D14] Length = 328 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 22/126 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++ + AA V E++P A N G + +AA + +YISTD Sbjct: 75 DIVFHLAALKHVPICEEQPAEALKTNVVGTQNVIEAAIKNKVKKVLYISTD--------- 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN------NYVILRTAWVYSIFGSNFLLSMLR 164 +NP N YG +K G EK+ Y N +V +R V GS L + Sbjct: 126 -----KASNPSNFYGMTKAIG-EKLVVYANLIQDETRFVCIRGGNVLGTNGSVIHLFKQQ 179 Query: 165 LAKERR 170 + +++R Sbjct: 180 IREQKR 185 >gi|150020963|ref|YP_001306317.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] gi|149793484|gb|ABR30932.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] Length = 352 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAYTAVDKAEDEPEI 72 ++L + V+ + + + DI+ K+ + F + D +IN AA + VD++ +P+I Sbjct: 42 ENLGKLTVEQRKRFKFIKGDIN---NKELLEYIFEEYEIDGVINFAAESHVDRSIYDPQI 98 Query: 73 AFSINAEGAGAIAKAADSI---------GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLN 122 N G + A G + +STD V+ L T E +P +P + Sbjct: 99 FLKTNILGTQTLLDVAKKYWYRDGKWKEGKKFLQVSTDEVYGSLGPTGYFTEKTPLDPHS 158 Query: 123 IYGKSKLAGEEKVASYTNNY 142 Y SK + + V +Y + Y Sbjct: 159 PYSASKASADLIVKAYHDTY 178 >gi|57235023|ref|YP_180952.1| NAD-dependent epimerase/dehydratase family protein [Dehalococcoides ethenogenes 195] gi|57225471|gb|AAW40528.1| NAD-dependent epimerase/dehydratase family protein [Dehalococcoides ethenogenes 195] Length = 312 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 96 IYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-I 153 ++ S+ V+ T +DE + P P+++YG SKLAGE +++Y++ Y + T + ++ I Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANI 175 Query: 154 FGS 156 GS Sbjct: 176 VGS 178 >gi|84502180|ref|ZP_01000328.1| NAD-dependent epimerase/dehydratase [Oceanicola batsensis HTCC2597] gi|84389540|gb|EAQ02259.1| NAD-dependent epimerase/dehydratase [Oceanicola batsensis HTCC2597] Length = 661 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 33/144 (22%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA--ADSIGIPCIYISTDYVFDGLSR-- 109 + + AA TAV + D P F INA G + +A A +P ++ ST+ V+ L+ Sbjct: 391 VFHLAAQTAVTSSLDAPVDDFDINARGTLNLLEAVRATEREVPVLFASTNKVYGALADLE 450 Query: 110 ----------------TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 +DE P + YG SK ++ V Y +Y +LR + Sbjct: 451 VRDRDEVVVPAEQRHLAGVDETRPLDFCTPYGCSKGVADQYVLDYARSYGLKAAVLRMSC 510 Query: 150 VYS--IFGS-------NFLLSMLR 164 VY FG+ +FL+S L+ Sbjct: 511 VYGPRQFGTEDQGWVAHFLISALK 534 >gi|319650720|ref|ZP_08004859.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacillus sp. 2_A_57_CT2] gi|317397577|gb|EFV78276.1| UDP-N-acetylglucosamine 4,6-dehydratase [Bacillus sp. 2_A_57_CT2] Length = 606 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 15/93 (16%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 PDVI + AA+ V E P+ A N G +A+AAD+ G+ + IS+D Sbjct: 352 KPDVIYHAAAHKHVPLMEYNPKEAVKNNVIGTKNVAEAADTYGVETFVLISSD------- 404 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP N+ G +K E + N Sbjct: 405 -------KAVNPTNVMGSTKRIAEMIIQELNRN 430 >gi|229153436|ref|ZP_04281614.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus m1550] gi|228630040|gb|EEK86691.1| Capsular polysaccharide biosynthesis protein capD [Bacillus cereus m1550] Length = 593 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 18/108 (16%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLS 108 P V+ + AA+ V E PE A N G +A+AAD+ GI + +STD Sbjct: 343 KPFVVYHAAAHKHVPLMERNPEEAVKNNIIGTKNVAEAADTFGINTFVMVSTD------- 395 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G +K E V +I +T +V FG+ Sbjct: 396 -------KAVNPTNVMGATKRVAEMVVQHMA---MISQTRFVAVRFGN 433 >gi|227114346|ref|ZP_03828002.1| dTDP-glucose 4,6-dehydratase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 357 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ V D R +D+ + F ++ P ++++ AA + Sbjct: 31 VVVVDKLTYAGNLSSLAPVADSS--RFAFEQVDICDRAELDRVFTAYQPALVMHLAAESH 88 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRTP- 111 VD++ D P N G + +A AD +ISTD VF L T Sbjct: 89 VDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADADKRAFRFHHISTDEVFGDLHGTDD 148 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 149 LFTETTPYAPSSPYSASKASSDHLVRAWLRTY 180 >gi|94263406|ref|ZP_01287220.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] gi|93456242|gb|EAT06376.1| dTDP-glucose 4,6-dehydratase [delta proteobacterium MLMS-1] Length = 368 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 9/105 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-----GIPCIY--ISTDYVF 104 D I++ AA + VD++ P+ N G + KAA G P + ISTD V+ Sbjct: 89 DTIVHFAAESHVDRSISGPDPFIETNVVGTHILLKAARKAWLSGSGRPHRFHHISTDEVY 148 Query: 105 DGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 L P E +P P + Y SK A + V SY + Y + T Sbjct: 149 GSLGPDDPPFRETTPYAPNSPYAASKAASDHLVRSYHHTYGLQTT 193 >gi|325928549|ref|ZP_08189737.1| dTDP-glucose 4,6-dehydratase [Xanthomonas perforans 91-118] gi|325541088|gb|EGD12642.1| dTDP-glucose 4,6-dehydratase [Xanthomonas perforans 91-118] Length = 326 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IGIP------ 94 AS PD ++N AA + VD++ + P N G A+ +A +P Sbjct: 41 ASLLHEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDHWKALPKERQDA 100 Query: 95 --CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 101 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 151 >gi|296166697|ref|ZP_06849122.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897962|gb|EFG77543.1| UDP-glucose 4-epimerase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 319 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY--I 98 D + P+V+ + AA V + +P+ S+N G +A+AA G+ I Sbjct: 66 DLQAILDEHRPEVVFHLAAQIDVRHSVADPQFDASVNVVGTVRLAEAARLAGVRKIVHTS 125 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S ++ P E +PT+P + Y K+AGE + ++ + Y Sbjct: 126 SGGSIYGTPPHYPTSEDAPTDPASPYAAGKVAGEIYLNTFRHLY 169 >gi|253580787|ref|ZP_04858050.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 5_1_39B_FAA] gi|251847857|gb|EES75824.1| dTDP-glucose 4,6-dehydratase [Ruminococcus sp. 5_1_39BFAA] Length = 342 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+++N AA + VD++ + PE+ + N G + A GI + +STD Sbjct: 68 KLFEEEHPDMVVNFAAESHVDRSIENPEVFLTTNIIGTAVLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ P++ Sbjct: 128 VYGDL---PLDRPDLFFTEETPIH 148 >gi|219852610|ref|YP_002467042.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] gi|219546869|gb|ACL17319.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] Length = 313 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Query: 95 CIYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I+ ST V+ + P E ++P P+++YG KLA E +++Y +++ + AWV+ Sbjct: 115 LIFTSTSTVYGEATVIPTPESYTPMEPISVYGAGKLASEAIISAYCHSFQM--KAWVF 170 >gi|150020410|ref|YP_001305764.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] gi|149792931|gb|ABR30379.1| dTDP-glucose 4,6-dehydratase [Thermosipho melanesiensis BI429] Length = 339 Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAYTAVDKAEDEPEI 72 ++L + V+ + + + DI+ K+ + F + D +IN AA + VD++ +P+I Sbjct: 42 ENLGKLTVEQRKRFKFIKGDIN---NKELLEYIFEEYEIDGVINFAAESHVDRSIYDPQI 98 Query: 73 AFSINAEGAGAIAKAADSI---------GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLN 122 N G + A G + +STD V+ L T E +P +P + Sbjct: 99 FLKTNILGTQTLLDVAKKYWYRDGKWKEGKKFLQVSTDEVYGSLGPTGYFTEKTPLDPHS 158 Query: 123 IYGKSKLAGEEKVASYTNNY 142 Y SK + + V +Y + Y Sbjct: 159 PYSASKASADLIVKAYHDTY 178 >gi|325954256|ref|YP_004237916.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] gi|323436874|gb|ADX67338.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] Length = 348 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP------EIAFSINAEGAGAIAKA 87 +D++ K + F + PD +I+ AA + VD++ P + ++N A Sbjct: 59 VDIVDAKAVNALFERYQPDGVIHLAAESHVDRSISNPIDFVMTNVIGTVNLLNAAKATWQ 118 Query: 88 ADSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D G ++STD V+ L T E + +P + Y SK + + V +Y + Y Sbjct: 119 NDYSGKRFHHVSTDEVYGTLGETGYFTEETSYDPHSPYSASKASSDHFVRAYHDTY 174 >gi|319793713|ref|YP_004155353.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] gi|315596176|gb|ADU37242.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS] Length = 383 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 34/146 (23%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSR 109 D + + AA AV + D+P F++NA G + +AA + +P + ST+ V+ GL Sbjct: 96 DHVFHFAAQVAVTTSLDDPREDFAVNALGTLNVLEAARAQPVPPSLVMTSTNKVYGGLDD 155 Query: 110 TPID----EFSP------------TNPLNI---YGKSKLAGEEKVASYTNNY----VILR 146 ++ + P T PL+ YG SK ++ V Y +Y V+ R Sbjct: 156 VALELDGQRYGPADADIAAHGIAETRPLDFHSPYGCSKGTADQYVRDYARSYGLRTVVFR 215 Query: 147 TAWVYS--IFGS-------NFLLSML 163 + +Y FG+ +FLL L Sbjct: 216 MSCIYGWRQFGTEDQGWVAHFLLRAL 241 >gi|218282229|ref|ZP_03488528.1| hypothetical protein EUBIFOR_01110 [Eubacterium biforme DSM 3989] gi|218216767|gb|EEC90305.1| hypothetical protein EUBIFOR_01110 [Eubacterium biforme DSM 3989] Length = 614 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 16/126 (12%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 I + + ++ ++ PDV+ + AA+ V ED P A N G + A GI Sbjct: 348 ISIREREEIYKLMKNYKPDVVYHAAAHKHVPLMEDRPTEAIRNNIFGTKNVIDACCDCGI 407 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY- 151 I ISTD NP N+ G +K E + S T + I A + Sbjct: 408 SRFIMISTD--------------KAVNPTNVMGATKRMTEMYMQSRTTHCGIHMAAVRFG 453 Query: 152 SIFGSN 157 ++ GSN Sbjct: 454 NVLGSN 459 >gi|21244310|ref|NP_643892.1| dTDP-glucose 4,6-dehydratase [Xanthomonas axonopodis pv. citri str. 306] gi|21109961|gb|AAM38428.1| dTDP-glucose 4,6-dehydratase [Xanthomonas axonopodis pv. citri str. 306] Length = 351 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IGIP------ 94 AS PD ++N AA + VD++ + P N G A+ +A +P Sbjct: 66 ASLLHEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDHWKALPKERQDA 125 Query: 95 --CIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|83950108|ref|ZP_00958841.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius nubinhibens ISM] gi|83838007|gb|EAP77303.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius nubinhibens ISM] Length = 347 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 42/249 (16%) Query: 12 IAQSLSSMCVQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 IA+ +C+ D+ R+ P + ++ F D+I N A + Sbjct: 45 IARDYRVICLDDLSTGRLSNIGHLLDHPSFEFVEQDVIEPFQPKGCIDLIFNMACPASPP 104 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN----- 119 K + +P F N +GA + + A G + ST ++ +P E N Sbjct: 105 KYQRDPIHTFKTNIQGAENMLRLAHKHGARILQASTSEIYGDPEISPQSESYHGNVNTLG 164 Query: 120 PLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFG-----------SNFLLSMLRLAK 167 P + Y + K A E + Y V R A +++ +G SNF+ +LR Sbjct: 165 PRSCYDEGKRAAETLFYDFRQQYGVDARIARIFNTYGPRMDPGDGRVVSNFVTQVLR--- 221 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM-TADGGPVSWADFA 226 +I++ D G+ T + +IQ L + H+ + G PV+ + Sbjct: 222 -GDDITIYGD--GSQTRSFCFVDDLIQ-----------GLCALIHLPKSPGQPVNLGNPE 267 Query: 227 EYIFWESAE 235 E+ E AE Sbjct: 268 EFTIRELAE 276 >gi|313904863|ref|ZP_07838235.1| dTDP-glucose 4,6-dehydratase [Eubacterium cellulosolvens 6] gi|313470296|gb|EFR65626.1| dTDP-glucose 4,6-dehydratase [Eubacterium cellulosolvens 6] Length = 343 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PD++ N AA + VD++ + P + + N G + A GI Sbjct: 58 LDICDREGVYKLFEEEKPDIVANFAAESHVDRSIENPTVFLNTNIIGTSVLMDACRKYGI 117 Query: 94 PCIY-ISTDYVFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L D F +P + + Y SK + + V +Y Y Sbjct: 118 RRYHQVSTDEVYGDLPLDRPDLFFHEDTPIHTSSPYSTSKASADLLVNAYHRTY 171 >gi|312129280|ref|YP_003996620.1| nad-dependent epimerase/dehydratase [Leadbetterella byssophila DSM 17132] gi|311905826|gb|ADQ16267.1| NAD-dependent epimerase/dehydratase [Leadbetterella byssophila DSM 17132] Length = 324 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD--SIGIPCIYISTDYVFD--GL 107 D I++ AA T + ED + +N + + ++AKAA S +++ + G Sbjct: 67 DYIVHAAAMTRAKRPED----YYKVNVQYSLSLAKAASLCSATKSFLFVGSLAAIGPVGY 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 S PI E P NP+ YG+SK EE++ Sbjct: 123 SSAPITENFPKNPVTGYGRSKREAEEEL 150 >gi|309784500|ref|ZP_07679138.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] gi|308927606|gb|EFP73075.1| dTDP-glucose 4,6-dehydratase [Shigella dysenteriae 1617] Length = 215 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|270291341|ref|ZP_06197563.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici 7_4] gi|270280187|gb|EFA26023.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici 7_4] Length = 331 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 7/106 (6%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK------AADSIGIPCIYIS 99 F +F P+V+IN AA + VD++ +P + N G + + A D +S Sbjct: 69 FQNFRPEVVINFAAESHVDQSIADPAKFITTNVNGTFNLIEEFKELWAEDYTHKRFHQVS 128 Query: 100 TDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 TD V+ L T E SP P + Y SK + + V SY + + Sbjct: 129 TDEVYGFLGATGSFTEASPYQPSSPYSASKASADLLVQSYGRTFGV 174 >gi|213406712|ref|XP_002174127.1| gal10 [Schizosaccharomyces japonicus yFS275] gi|212002174|gb|EEB07834.1| gal10 [Schizosaccharomyces japonicus yFS275] Length = 645 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 7/106 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDL F SF + +I+ AA AV ++ +P + N G + + + + Sbjct: 61 IDLRDKTGLNKVFESFPIESVIHFAALKAVGESTQKPLDYYDNNINGTTTLLEVMSAHNV 120 Query: 94 PCI-YISTDYVFDGLSR------TPIDEFSPTNPLNIYGKSKLAGE 132 I Y S+ V+ ++R PI E P +P N YGK+K E Sbjct: 121 KTIVYSSSATVYGDVTRFKDRNYIPIPEECPRDPTNPYGKTKYTIE 166 >gi|56421831|ref|YP_149149.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] gi|56381673|dbj|BAD77581.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] Length = 323 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 20/163 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEII---------------RVGRPDIDLLKPKDFASFFLS 48 LV+G G I L V+ ++I R DL D F Sbjct: 3 LVVGGAGYIGSHLVKELVEKEQVIVLDNLSTGHRYLVDDRAVFVQGDLGNKADLEPIFGK 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + +++ AA + V ++ P + N + + + S+ G+ Sbjct: 63 YPIQAVMHFAANSLVGESVVNPLKYYQNNVAATLTLLETMLKYNVKNFIFSSTAATYGIP 122 Query: 109 RTP-IDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 I E PTNP+N YG+SKL E+ +A +Y NYV+LR Sbjct: 123 NVELITEDCPTNPINPYGRSKLMIEQILADFASAYGLNYVVLR 165 >gi|227894120|ref|ZP_04011925.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ultunensis DSM 16047] gi|227864065|gb|EEJ71486.1| dTDP-glucose 4,6-dehydratase [Lactobacillus ultunensis DSM 16047] Length = 356 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ + P I N G + A GI + +STD Sbjct: 79 KLFEEEKPDVVVNFAAESHVDRSIENPTIFLETNIIGTSVLMDACRKYGIKRFHQVSTDE 138 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F PL+ Sbjct: 139 VYGDL---PLDRPDLFFHEDTPLH 159 >gi|172040572|ref|YP_001800286.1| hypothetical protein cur_0892 [Corynebacterium urealyticum DSM 7109] gi|171851876|emb|CAQ04852.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 357 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 35/194 (18%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 ++L DFA+ F + AA + V ++ ++P+ + N + A G+ Sbjct: 87 EVLADGDFAAVF---------HFAARSLVGESVEQPDAYWHHNVVTTLTLLDAMREAGVK 137 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT------ 147 ++ ST + + PI E PT P N YG SKL + + SY Y + T Sbjct: 138 NIVFSSTAACYGEPEQVPITEDMPTAPTNPYGASKLTIDYMLTSYAKAYDLAATSLRYFN 197 Query: 148 -AWVYSIFGSN------FLLSMLRLAKERRE-ISVVCDQFGT--PTSALQIARAIIQI-- 195 A Y FG N + +L++A RE IS+ FG+ PT R I I Sbjct: 198 VAGAYQQFGENREVETHLIPIVLQVALGHRESISI----FGSDWPTKDGTAVRDYIHIKD 253 Query: 196 ---AHNLIENSDTS 206 AH L S+ + Sbjct: 254 LADAHVLAATSNVA 267 >gi|111220942|ref|YP_711736.1| putative UDP-galactose 4-epimerase [Frankia alni ACN14a] gi|111148474|emb|CAJ60146.1| putative UDP-galactose 4-epimerase [Frankia alni ACN14a] Length = 331 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 17/155 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAADS 90 DLL P+ + + D + + AA T V ++ P F N G A+ + Sbjct: 50 DLLDPRQLTAAGVDRGFDGVCHLAALTRVRESRMAPLRYFQANLTGTVNLLTALEIGTER 109 Query: 91 IGIPCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVI 144 G+ ++ S+ V+ + T + E P +P N YG SKLA E ++ VI Sbjct: 110 TGVAPAFVFGSSCAVYGDVDLTGVPESRPPDPSNPYGASKLAAERLLSHQAGTGLVGAVI 169 Query: 145 LRTAWV-------YSIFGSNFLLSMLRLAKERREI 172 LR+ V Y S + + + +A RR++ Sbjct: 170 LRSFNVAGAVEGHYDRDDSRIIPAAIAVASGRRDV 204 >gi|60681200|ref|YP_211344.1| putative capsular biosynthesis protein [Bacteroides fragilis NCTC 9343] gi|60492634|emb|CAH07406.1| putative capsular biosynthesis protein [Bacteroides fragilis NCTC 9343] gi|195976049|gb|ACG63556.1| UngD1 [Bacteroides fragilis] Length = 634 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 24/133 (18%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ S F + P + + AAY V ED A +N G +A A G+ Sbjct: 349 DVTNQTRMESIFKDYRPQYVFHAAAYKHVPMMEDNVSEAIQVNVLGTRIMADLAVKYGVE 408 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE-------EKVASYTNNYVILR 146 + +STD NP N+ G SK E +++ Y N+ +++ Sbjct: 409 KFVMVSTD--------------KAVNPTNVMGCSKRLAEIYVQSLAHQLSKYVNDGALVK 454 Query: 147 --TAWVYSIFGSN 157 T ++ GSN Sbjct: 455 FITTRFGNVLGSN 467 >gi|22124281|ref|NP_667704.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis KIM 10] gi|45442935|ref|NP_994474.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Microtus str. 91001] gi|108806154|ref|YP_650070.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Antiqua] gi|108810267|ref|YP_646034.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|145600730|ref|YP_001164806.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides F] gi|167469845|ref|ZP_02334549.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis FV-1] gi|21957051|gb|AAM83955.1|AE013637_5 dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM 10] gi|45437802|gb|AAS63351.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Microtus str. 91001] gi|108773915|gb|ABG16434.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Nepal516] gi|108778067|gb|ABG12125.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Antiqua] gi|145212426|gb|ABP41833.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Pestoides F] Length = 357 Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + P+V+++ AA + VD++ D P N G + +AA Sbjct: 60 VDICDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 119 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 120 QLSVEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 179 Query: 142 Y 142 Y Sbjct: 180 Y 180 >gi|327189736|gb|EGE56882.1| UDP-glucose 4-epimerase protein [Rhizobium etli CNPAF512] Length = 327 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL- 107 FSPD +I+ A V ++ P + N G+ + +A I I S+ G+ Sbjct: 66 FSPDCVIHCGANAYVGESVVMPRKYYRNNVVGSLTLLEACLDQDIDRIVFSSTCATYGVP 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E +P P+N YG++KL E + + Y I A Y Sbjct: 126 ASLPIREETPQQPVNPYGRTKLIFEMALEDFAAAYGIRFAALRY 169 >gi|282878518|ref|ZP_06287299.1| dTDP-glucose 4,6-dehydratase [Prevotella buccalis ATCC 35310] gi|281299309|gb|EFA91697.1| dTDP-glucose 4,6-dehydratase [Prevotella buccalis ATCC 35310] Length = 382 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPC 95 F D ++N AA + VD++ ++P++ S+N G + AA D+ G P Sbjct: 72 KLFAEHDIDFVVNFAAESHVDRSIEDPQLFLSVNILGTQNLMDAARRAWVTGKDAQGYPT 131 Query: 96 I-------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P P + Y SK + + V +Y + Y Sbjct: 132 WKAGKRYHQVSTDEVYGSLGAEGYFSEQTPLCPHSPYSASKTSADMIVMAYRDTY 186 >gi|254443734|ref|ZP_05057210.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] gi|198258042|gb|EDY82350.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] Length = 317 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 26/212 (12%) Query: 2 KCLVIGNNGQI----AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K V G +G + A+ L+S+ + ++ ++DL + D +FF + PDV++ Sbjct: 7 KIFVCGASGMVGSAVARRLTSLGYTN--LVTASSSELDLTRQADVEAFFQTHKPDVVVMA 64 Query: 58 AAYTAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDE- 114 AA A + F N A AA G+ +++ + ++ L+ P+ E Sbjct: 65 AAKVGGIHANNTYPADFGYQNLVIASNTIHAAYQAGVSRFLFLGSSCIYPKLAPQPLRED 124 Query: 115 ---FSPTNPLN-IYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFG---------SNFLL 160 SP P N Y +K+AG + Y Y V+ + +++G S+ L Sbjct: 125 CLLTSPLEPTNEAYAIAKIAGLKLCEYYRKQYGVMYHSLMPTNLYGPGDNYHPDNSHLLP 184 Query: 161 SMLRL---AKERREISVVCDQFGTPTSALQIA 189 +++R AKE V GTP L A Sbjct: 185 ALIRRFHEAKEANAPEVTMWGTGTPLRELMHA 216 >gi|158423457|ref|YP_001524749.1| dTDP-D-glucose-4,6-dehydratase [Azorhizobium caulinodans ORS 571] gi|158330346|dbj|BAF87831.1| dTDP-D-glucose-4,6-dehydratase [Azorhizobium caulinodans ORS 571] Length = 354 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 11/106 (10%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------AADSIGIPCIY 97 F PD +++ AA + VD++ D P + N G + + +A G + Sbjct: 75 GFKPDTVMHLAAESHVDRSIDGPGAFITTNINGTYVMLQEALRYWRTLGSAAQEGFRFHH 134 Query: 98 ISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD VF L + E +P P + Y SK A + V ++ + Y Sbjct: 135 ISTDEVFGSLGAEGLFREDTPYQPNSPYSASKAASDHLVRAWHHTY 180 >gi|604222|gb|AAA57872.1| UDP-glucose 4-epimerase [Azospirillum brasilense] Length = 338 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + DL F + D + + AA + V ++ +P + N + + +AA + G Sbjct: 53 EADLADMDALTRVFAEWRFDAVFHFAALSLVGESMRDPHLYLHGNTVNSLNLIRAATTAG 112 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 + ++ ST +F R PIDE + +P + YG+SK Sbjct: 113 VRKMVFSSTANLFGTPERLPIDEETTIDPGSPYGESKF 150 >gi|331004509|ref|ZP_08327979.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410687|gb|EGG90110.1| dTDP-glucose 4,6-dehydratase [Lachnospiraceae oral taxon 107 str. F0167] Length = 340 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%) Query: 40 KDFA-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY- 97 +DF F PDV+IN AA + VD++ +PE N G + A GI + Sbjct: 63 RDFIFKLFEEEKPDVVINFAAESHVDRSITDPESFVRTNVMGTTTLLDACRKYGIKRYHQ 122 Query: 98 ISTDYVFDGLSRTPIDE----FSPTNPLN 122 +STD V+ L P+D F+ PL+ Sbjct: 123 VSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|320335547|ref|YP_004172258.1| sugar transferase [Deinococcus maricopensis DSM 21211] gi|319756836|gb|ADV68593.1| sugar transferase [Deinococcus maricopensis DSM 21211] Length = 520 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 19/168 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSP---- 51 LV+G +G + ++L V+ E + RPD + + D L++ P Sbjct: 5 VLVVGASGFVGRALCQELVRRGERVHAAARRPDGLPEGVHFVPLPDLTQAGLNWEPLLVG 64 Query: 52 -DVIINPAAYTAV-DKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 D +I AA V + +P A+ ++N + ++A AA G+ +Y+S+ V Sbjct: 65 VDRVIYLAARVHVMNDTHPDPLAAYRAVNRDAPRSLAAAAAQQGLQRFVYLSSVKVNGES 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVY 151 S P E +P P++ YG SKL E+ + A+ V+LR VY Sbjct: 125 SAEPFTEQTPPAPVDPYGVSKLEAEQALFELSAATGLQVVVLRPPLVY 172 >gi|311070293|ref|YP_003975216.1| putative dTDP-glucose 4,6-dehydratase [Bacillus atrophaeus 1942] gi|310870810|gb|ADP34285.1| putative dTDP-glucose 4,6-dehydratase [Bacillus atrophaeus 1942] Length = 316 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLS 108 S DV+I+ AA + VD++ + E + N G +A+A I+ISTD V+ L Sbjct: 74 SYDVVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEAVLHGKAKKLIHISTDEVYGDLE 133 Query: 109 RT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 E +P +P N Y SK + + V SY + + Sbjct: 134 ADDPAFTETTPLSPNNPYSASKASSDLLVQSYVKTHQL 171 >gi|262276327|ref|ZP_06054136.1| UDP-N-acetylglucosamine 4,6-dehydratase [Grimontia hollisae CIP 101886] gi|262220135|gb|EEY71451.1| UDP-N-acetylglucosamine 4,6-dehydratase [Grimontia hollisae CIP 101886] Length = 337 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNVDGAENVIHAALQCGVKDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLVS-DKLFTAANN 155 >gi|116671880|ref|YP_832813.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] gi|116611989|gb|ABK04713.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24] Length = 322 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 25/160 (15%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGR--------PD------IDLLKPKDFASFF 46 + V G +G++ +S+ + + +I V R PD DLL P + Sbjct: 3 RIFVTGGSGRLGRSVVAGLAGAGHHVISVDRDAVPAAQLPDGVEQRTADLLAPGEAERLL 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +PD +++ AA A ++ + FS N A A+ AA + I I ++ G Sbjct: 63 RETTPDAVVHLAAIAVPFSAPED--VIFSTNTRLAYAVISAATELRIGKIVTASSPTVLG 120 Query: 107 LSRT--------PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 P+DE + P N Y SKL E+ V + Sbjct: 121 YGSPAGWLPESFPVDEQTTPRPWNAYALSKLIAEQTVQMF 160 >gi|326793923|ref|YP_004311743.1| UDP-N-acetylglucosamine 4,6-dehydratase [Marinomonas mediterranea MMB-1] gi|326544687|gb|ADZ89907.1| UDP-N-acetylglucosamine 4,6-dehydratase [Marinomonas mediterranea MMB-1] Length = 337 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + +AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNIDGAENVIQAALQCGVQDVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLVS-DKLFTAANN 155 >gi|295092683|emb|CBK78790.1| dTDP-glucose 4,6-dehydratase [Clostridium cf. saccharolyticum K10] Length = 340 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 28/138 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRV----------------GRPDIDLLKP-- 39 MK +V G G I + V D +I+ + G+P+ +K Sbjct: 1 MKIIVTGGAGFIGGNFVHHMVNKYPDYQIVNLDLLTYAGNLETLKPVEGKPNYKFVKGDI 60 Query: 40 ---KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 K F PDV++N AA + VD++ +PE N G + A GI Sbjct: 61 ADRKFIFDLFREEKPDVVVNFAAESHVDRSITDPESFVRTNVMGTTTLLDACKEFGIKRY 120 Query: 97 Y-ISTDYVFDGLSRTPID 113 + +STD V+ L P+D Sbjct: 121 HQVSTDEVYGDL---PLD 135 >gi|289662632|ref|ZP_06484213.1| dTDP-glucose 4,6-dehydratase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 351 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCI---- 96 A PD ++N AA + VD++ + P N G A+ +A +P + Sbjct: 66 ARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPAVRSDA 125 Query: 97 ----YISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 126 FRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTY 176 >gi|260184709|ref|ZP_05762183.1| hypothetical protein MtubCP_01452 [Mycobacterium tuberculosis CPHL_A] gi|289445385|ref|ZP_06435129.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis CPHL_A] gi|289418343|gb|EFD15544.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis CPHL_A] Length = 326 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 32/192 (16%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 72 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 131 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-----SNFL 159 +DE + P + YG SK A + SY +Y I+R ++IFG F Sbjct: 132 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFGVRQKAGRFG 188 Query: 160 LSMLRLAKE---------------RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 + RL ++ R+ V D G L+ +Q A N D Sbjct: 189 ALIPRLVRQGINGEGLTIFGAGSATRDYLYVSDIVGAYNLVLRTPTLRVQ-AINFASGKD 247 Query: 205 TSLRGIFHMTAD 216 T +R I AD Sbjct: 248 TRVRDIVEYVAD 259 >gi|302875845|ref|YP_003844478.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] gi|307689278|ref|ZP_07631724.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] gi|302578702|gb|ADL52714.1| dTDP-glucose 4,6-dehydratase [Clostridium cellulovorans 743B] Length = 351 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 10/101 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI---------GIPCIYISTDY 102 D ++N AA + VD++ PEI N G + A + G+ +++STD Sbjct: 77 DYVVNFAAESHVDRSIKNPEIFAETNVLGTVNMLNCAKNSWETETGWKEGVKFLHVSTDE 136 Query: 103 VFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L T E +P +P + Y SK + V +Y + Y Sbjct: 137 VYGSLGETGFFMETTPLDPHSPYSSSKAGSDLMVKAYGDTY 177 >gi|3832507|gb|AAC70775.1| dTDP-D-glucose 4,6 dehydratase [Klebsiella pneumoniae] Length = 354 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 26/158 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M CL N +SL+ + + R D+ A+ F F PD++++ AA Sbjct: 31 MDCLTYAGN---LESLAPVAGSE----RYSFSQTDITDAAAVAAQFSEFRPDIVMHLAAE 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI----------YISTDYVFDGLSRT 110 + VD++ D P N G + +AA + +ISTD V+ L R+ Sbjct: 84 SHVDRSIDGPAAFIHTNVIGTFTLLEAARHYWSGLVEEQKQAFRFHHISTDEVYGDLHRS 143 Query: 111 ------PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++P++P Y SK + V ++ Y Sbjct: 144 QSTCPPKKTSYAPSSP---YSASKAGSDHLVRAWNRTY 178 >gi|21221432|ref|NP_627211.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|256787381|ref|ZP_05525812.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|289771282|ref|ZP_06530660.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] gi|7546678|emb|CAB87338.1| UDP-glucose 4-epimerase [Streptomyces coelicolor A3(2)] gi|289701481|gb|EFD68910.1| UDP-glucose 4-epimerase [Streptomyces lividans TK24] Length = 326 Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +++ AA V ++ D P + N EG + A + G+P S+ G+ + Sbjct: 70 VVHLAAKKQVGESVDLPLHYYRQNVEGLRVLLDAVTAAGVPSFVFSSSAAVYGMPDVDLV 129 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E +P P++ YG++KLAGE Sbjct: 130 TEETPCVPMSPYGETKLAGE 149 >gi|311070170|ref|YP_003975093.1| NAD-dependent epimerase/dehydratase [Bacillus atrophaeus 1942] gi|310870687|gb|ADP34162.1| NAD-dependent epimerase/dehydratase [Bacillus atrophaeus 1942] Length = 314 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K FL D+ + A V + D+P+ F + G I + + Sbjct: 57 DIKDAKTLEDLFLK-KFDICYHLGASINVQDSIDDPKTTFENDTIGTFNILELCKKHNVK 115 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++ST V+D + I E P P + Y SK+A E V SY + Y Sbjct: 116 VVFMSTCMVYDRAAFAEGIKETDPIKPASPYAGSKIAAENMVLSYYHAY 164 >gi|158429571|pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad gi|158429572|pdb|2PZK|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad gi|158429573|pdb|2PZL|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad And Udp gi|158429574|pdb|2PZL|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad And Udp gi|158429575|pdb|2PZM|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad And Udp gi|158429576|pdb|2PZM|B Chain B, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad And Udp Length = 330 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F SF P +++ AA A +D E A + N +G+ +AKAA G+ + T + Sbjct: 84 FDSFKPTHVVHSAA--AYKDPDDWAEDA-ATNVQGSINVAKAASKAGVKRLLNFQTALCY 140 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + PI SPT P YG SK AGE + V LR A V Sbjct: 141 GRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANV 186 >gi|288959061|ref|YP_003449402.1| UDP-glucose 4-epimerase [Azospirillum sp. B510] gi|288911369|dbj|BAI72858.1| UDP-glucose 4-epimerase [Azospirillum sp. B510] Length = 323 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 23/191 (12%) Query: 52 DVIINPAAYTAV--DKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 D +I+ AA V D A D +N+ G +A+ A + G+ +++S+ S Sbjct: 69 DAVIHMAARVHVMRDTAADPLAEFCRVNSAGTVRLAEQAAAAGVKRFVFLSSIKAMVDES 128 Query: 109 R-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSML 163 R TP+D P + YG SKL E +A+ + ++R VY + + +++ Sbjct: 129 RPTPLDAAETPGPHSPYGISKLEAERALAAISARSGMEVAVIRPPLVYGPGAAGNMRALV 188 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGG 218 RL V P + R++I + NL + T L G + DG Sbjct: 189 RL---------VATGLPLPLGGIHNRRSLIYVG-NLADAVVTVLEHPAAAGQTFLVQDGE 238 Query: 219 PVSWADFAEYI 229 P+S AD I Sbjct: 239 PLSTADLVRAI 249 >gi|258653358|ref|YP_003202514.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM 44233] gi|258556583|gb|ACV79525.1| NAD-dependent epimerase/dehydratase [Nakamurella multipartita DSM 44233] Length = 342 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 52/258 (20%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+ ++ +D F D I++ A + + ++ + +N +G +A A S G Sbjct: 54 DVRSVQAEDLVGF------DAIVHMAELSNDPLGDLLGDVTYDVNHKGTLRLATLAKSAG 107 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTA 148 + I++S+ V+ G++ +DE SP NP Y K E V++ ++ +R A Sbjct: 108 VQRFIHMSSCSVY-GVADGVVDESSPINPQTAYADCKALVERDVSALADDAFSPTFMRNA 166 Query: 149 WVYSIFGSN-------FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAI----- 192 + FG++ L ++ LA IS+ D GTP A+ I +AI Sbjct: 167 ---TAFGASPRMRFDIVLNNLAGLAHTTGRISMTSD--GTPWRPLVHAMDIGKAIRCALE 221 Query: 193 --IQIAHNLIEN-----SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR 245 + HN + N + +R I A P +F GP ++ YR Sbjct: 222 APRDVVHNEVFNVGSNEQNYQVREIAEQVAAAFPGCVTEFGP---------PGPDNRSYR 272 Query: 246 I-FTKQYPTKAHRPAYSC 262 + F K + A P + C Sbjct: 273 VNFDKIH---AQLPGFEC 287 >gi|256830647|ref|YP_003159375.1| dTDP-glucose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] gi|256579823|gb|ACU90959.1| dTDP-glucose 4,6-dehydratase [Desulfomicrobium baculatum DSM 4028] Length = 341 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 F D ++N AA + VD++ +P + N G + +AA IP ++ISTD V+ L Sbjct: 76 FVFDAVLNFAAESHVDRSISDPFPFVTTNVLGTQNLLEAARRAEIPRFVHISTDEVYGTL 135 Query: 108 SRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 T E +P P + Y SK + + +Y + Y Sbjct: 136 GPTGQFTEDTPLAPNSPYSASKASSDLLARAYFHTY 171 >gi|223934764|ref|ZP_03626684.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] gi|223896719|gb|EEF63160.1| NAD-dependent epimerase/dehydratase [bacterium Ellin514] Length = 329 Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 66/177 (37%), Gaps = 30/177 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---------------------QDVEIIRVGRPDIDLLKP 39 MK LV G G I ++ C +DVE + + L++ Sbjct: 1 MKSLVTGGAGFIGSHVARYCRDMGHEVVVLDDLSGGFKDQVPEDVEFVEGCITNQKLVE- 59 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 S FL D + + AAY A + ++ N G+ + AA + C + Sbjct: 60 ----SLFLKHRFDYVYHLAAYAAEGLSHFIRRFNYTNNLIGSVNLINAAVKYEVKCFVFT 115 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYS 152 + G + P+ E P + YG SK A E +A+ + NY+I R VY Sbjct: 116 SSIAVYGAGQVPMIESMVPRPEDPYGISKFAVEMDLAAAHEMFGLNYIIFRPHNVYG 172 >gi|219849940|ref|YP_002464373.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aggregans DSM 9485] gi|219544199|gb|ACL25937.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aggregans DSM 9485] Length = 342 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDG 106 ++ D IIN AA T VD++ P+ N G A+ + A + + + ISTD V+ Sbjct: 73 TYDIDTIINFAAETHVDRSIMAPDAVVRTNVNGTWALLEVARELKLERFHQISTDEVYGA 132 Query: 107 L-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + E P P + Y SK E V +Y Y Sbjct: 133 IPAPRRSREGDPLEPRSPYSASKAGAEHLVYAYYITY 169 >gi|255559142|ref|XP_002520593.1| UDP-glucose 4-epimerase, putative [Ricinus communis] gi|223540253|gb|EEF41826.1| UDP-glucose 4-epimerase, putative [Ricinus communis] Length = 295 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWVYSI 153 IY ST + + PI E + P+N YGK+K E+ + + TN + +++++ Sbjct: 101 IYSSTCTTYGEPEKMPITEETHQKPINPYGKAKKMAEDIIIDFFKTNGMAFMILRYIFNV 160 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 GS+ L + R +C+ + AR II +RG + Sbjct: 161 IGSD---PEEHLGESPR--PALCEHGRISGACFDAARGII---------PGLKIRGTDYK 206 Query: 214 TADG 217 TADG Sbjct: 207 TADG 210 >gi|304398137|ref|ZP_07380012.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. aB] gi|304354423|gb|EFM18795.1| dTDP-glucose 4,6-dehydratase [Pantoea sp. aB] Length = 356 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ F PD +++ AA + VD++ D P N G + +AA S Sbjct: 58 VDICDRTALDEVFARHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTWQLLEAARSYWQ 117 Query: 92 --------GIPCIYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD VF L S+ E +P P + Y SK + + V ++ Sbjct: 118 TLDDARKRAFLFHHISTDEVFGDLHDSQAYFTETTPYAPSSPYAASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|159185688|ref|NP_357292.2| UDP-glucose 4-epimerase [Agrobacterium tumefaciens str. C58] gi|159140822|gb|AAK90077.2| UDP-glucose 4-epimerase [Agrobacterium tumefaciens str. C58] Length = 327 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + FSP +I+ AA V ++ ++P + N G+ ++ A I Sbjct: 52 DILDGVLLKATLREFSPAFVIHCAANAYVGESVEDPRKYYRNNVGGSLSLLDACLDQNIG 111 Query: 95 CIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 + S+ G+ + PI E + P+N YG++KL A E+ A+Y +V LR Sbjct: 112 GLVFSSSCATYGVPQQLPIREETAQMPVNPYGRTKLIFEMALEDYAAAYGLRFVALR 168 >gi|115350805|ref|YP_772644.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] gi|115280793|gb|ABI86310.1| dTDP-glucose 4,6-dehydratase [Burkholderia ambifaria AMMD] Length = 353 Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P + + AA + VD++ P N G + +A Sbjct: 56 VDICDRAALDALFAEHKPRAVAHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWS 115 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD G +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 116 GLNDADKAGFRFLHVSTDEVFGSLSPTDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 175 Query: 142 Y 142 Y Sbjct: 176 Y 176 >gi|330961718|gb|EGH61978.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 357 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 14/122 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ +D F PD I++ AA + VD++ P N G + +AA Sbjct: 57 VDICNREDLDRVFKEHQPDAIMHLAAESHVDRSITGPSEFIQTNIIGTYTLLEAARGYWN 116 Query: 92 --------GIPCIYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTN 140 G +ISTD V+ L P D F +P P + Y SK + + V +++ Sbjct: 117 QLDEARKAGFRFHHISTDEVYGDL-EGPEDLFTETTPYQPSSPYSASKASSDHLVRAWSR 175 Query: 141 NY 142 Y Sbjct: 176 TY 177 >gi|318042802|ref|ZP_07974758.1| UDP-glucose 4-epimerase [Synechococcus sp. CB0101] Length = 348 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT- 110 D +I+ A AV ++ +P + +N G+ + A + G + S+ G T Sbjct: 85 DAVIHFAGLKAVGESVAQPLRYWDVNVSGSQHLLAAMAAHGCRTLVFSSSATLYGYPETV 144 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV 135 PI E +P P+N YG +K A E+ + Sbjct: 145 PIPESAPIQPINPYGYTKAAVEQML 169 >gi|226334852|ref|YP_002784524.1| GDP-mannose 4,6-dehydratase [Rhodococcus opacus B4] gi|226246072|dbj|BAH56172.1| GDP-mannose 4,6-dehydratase [Rhodococcus opacus B4] Length = 342 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 16/130 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N AA + V + DEPE + G+ + +A G+ Sbjct: 63 DLSDGARLVTLLAGIRPDEVYNLAAQSHVRVSFDEPEHTGNTTGIGSVRLLEAVRLTGLN 122 Query: 95 CIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWV 150 C Y S+ +F G + P +E +P P + YG + KV SY T NY R A Sbjct: 123 CRYYQASSSEMF-GATPPPQNEETPFYPRSPYGAA------KVYSYWVTKNY---REA-- 170 Query: 151 YSIFGSNFLL 160 Y +F N +L Sbjct: 171 YGLFAVNGIL 180 >gi|158056587|emb|CAP11387.1| UDP-D-glucose-4-epimerase [Streptomyces olivaceus] Length = 329 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 I++ AA AV ++ + P + N G + +AA + G+ S+ G+ T + Sbjct: 70 IVHLAAKKAVGESVERPLHYYRENVTGLQVLLEAAAAAGVDSFLFSSSASVYGMPDTDLV 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS 137 E +P PL+ YG++K+AGE V S Sbjct: 130 TEDTPCAPLSPYGETKVAGEWMVRS 154 >gi|119505008|ref|ZP_01627085.1| oxidoreductase Rmd [marine gamma proteobacterium HTCC2080] gi|119459294|gb|EAW40392.1| oxidoreductase Rmd [marine gamma proteobacterium HTCC2080] Length = 296 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 6/141 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA-GAIAKAADSIGI 93 DL P D A PD +I+ AA V A +P + IN +A DS Sbjct: 47 DLCSPNDVAKLVRDARPDAVIHLAAIAFV--AHGDPSAFYQINVVATRHLLAALEDSQHK 104 Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-AWV 150 P + S+ ++ + + E + NP N Y SKLA E + + I T + Sbjct: 105 PTSIVLASSANIYGNQTAGTLSETTTPNPANDYAVSKLAMEYMAKLWMDRLPITITRPFN 164 Query: 151 YSIFGSNFLLSMLRLAKERRE 171 Y+ G N + ++ + RE Sbjct: 165 YTGVGQNPFFLVPKIVQHCRE 185 >gi|153997082|ref|ZP_02022215.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CA88-4125] gi|162418754|ref|YP_001605113.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Angola] gi|165926287|ref|ZP_02222119.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939693|ref|ZP_02228236.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. IP275] gi|166009628|ref|ZP_02230526.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213636|ref|ZP_02239671.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402080|ref|ZP_02307559.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420831|ref|ZP_02312584.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425992|ref|ZP_02317745.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218930865|ref|YP_002348740.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CO92] gi|229837195|ref|ZP_04457360.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides A] gi|229839555|ref|ZP_04459714.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229900118|ref|ZP_04515255.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. India 195] gi|229900435|ref|ZP_04515564.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|270488791|ref|ZP_06205865.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM D27] gi|294505525|ref|YP_003569587.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Z176003] gi|115349476|emb|CAL22449.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CO92] gi|149289388|gb|EDM39466.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis CA88-4125] gi|162351569|gb|ABX85517.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis Angola] gi|165912383|gb|EDR31017.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. IP275] gi|165921811|gb|EDR39008.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991550|gb|EDR43851.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205309|gb|EDR49789.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960960|gb|EDR56981.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048554|gb|EDR59962.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055140|gb|EDR64939.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682454|gb|EEO78541.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Nepal516] gi|229686898|gb|EEO78977.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. India 195] gi|229695921|gb|EEO85968.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706138|gb|EEO92147.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Pestoides A] gi|262363591|gb|ACY60312.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis D106004] gi|262367519|gb|ACY64076.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis D182038] gi|270337295|gb|EFA48072.1| dTDP-glucose 4,6-dehydratase [Yersinia pestis KIM D27] gi|294355984|gb|ADE66325.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis Z176003] gi|320013537|gb|ADV97108.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 355 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + P+V+++ AA + VD++ D P N G + +AA Sbjct: 58 VDICDSSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 QLSVEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|289522135|ref|ZP_06438989.1| UDP-glucose 4-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503971|gb|EFD25135.1| UDP-glucose 4-epimerase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 330 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 6/115 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD- 101 + F PD + + AA V K+ P +N +G I A G+ + ++ Sbjct: 71 SEVFDEVHPDYVCHHAAQIDVRKSVANPMYDAEVNIKGLLNILSCAIRTGVKGVIFASSG 130 Query: 102 -YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 V+ + P+ E P PL+ YG SKL+ E + Y Y+ LR A VY Sbjct: 131 GVVYGEPTLLPVSETHPKGPLSPYGVSKLSSEYYLYYYNKVFGLPYIALRYANVY 185 >gi|282866066|ref|ZP_06275114.1| UDP-glucose 4-epimerase [Streptomyces sp. ACTE] gi|282559105|gb|EFB64659.1| UDP-glucose 4-epimerase [Streptomyces sp. ACTE] Length = 327 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +++ AA V ++ + P + + N G + +A + G+ +S+ G+ I Sbjct: 70 VVHLAAKKQVGESVERPLLYYRENVGGLTVLLEAVAAAGVRRFVLSSSAAVYGVPDVEHI 129 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E +P P+N YG++KLAGE Sbjct: 130 TELTPCAPINPYGETKLAGE 149 >gi|260577299|ref|ZP_05845272.1| NADH dehydrogenase [Rhodobacter sp. SW2] gi|259020480|gb|EEW23803.1| NADH dehydrogenase [Rhodobacter sp. SW2] Length = 342 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 12/79 (15%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 F++ ++GAG IA+ A G+ + LS D SP+ IY KSK AGE Sbjct: 104 FAVQSDGAGRIARIATEFGVANLV--------HLSAIGADANSPS----IYAKSKAAGEA 151 Query: 134 KVASYTNNYVILRTAWVYS 152 V N VILR + ++ Sbjct: 152 AVLKAFPNAVILRPSVIFG 170 >gi|153954172|ref|YP_001394937.1| hypothetical protein CKL_1547 [Clostridium kluyveri DSM 555] gi|219854781|ref|YP_002471903.1| hypothetical protein CKR_1438 [Clostridium kluyveri NBRC 12016] gi|146347053|gb|EDK33589.1| GalE [Clostridium kluyveri DSM 555] gi|219568505|dbj|BAH06489.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 28/185 (15%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRTPI 112 +I+ AAY+ V ++ +EP F N G + K+ G+ I + ST + PI Sbjct: 69 VIDFAAYSLVGESVEEPLKYFENNVVGTLNLLKSMRKYGVKYIVFSSTAATYGEPKNIPI 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR-----TAWVYSIFG------SN 157 E T P N YG+SKL E+ + +Y Y LR A + + G ++ Sbjct: 129 FEDDSTYPTNPYGESKLTVEKLLKWSDRAYGIKYAALRYFNAAGAHISGLIGEDHNPETH 188 Query: 158 FLLSMLRLA-KERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIENSDTSLR 208 + +L++A K+R +I + D + T + +A A + + +IE+ + Sbjct: 189 LIPIILQVALKKRDKIFIFGDDYSTEDGTCIRDYVHVMDLANAHLLALNKIIEDGKS--- 245 Query: 209 GIFHM 213 GI+++ Sbjct: 246 GIYNL 250 >gi|256843716|ref|ZP_05549204.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus 125-2-CHN] gi|256615136|gb|EEU20337.1| dTDP-glucose 4,6-dehydratase [Lactobacillus crispatus 125-2-CHN] Length = 326 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 8/94 (8%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PDV++N AA + VD++ + PEI N G + A I Sbjct: 39 LDICDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYDI 98 Query: 94 PCIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F PL+ Sbjct: 99 KRFHQVSTDEVYGDL---PLDRPDLFFHEDTPLH 129 >gi|256819061|ref|YP_003140340.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea DSM 7271] gi|256580644|gb|ACU91779.1| dTDP-glucose 4,6-dehydratase [Capnocytophaga ochracea DSM 7271] Length = 330 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-----D 89 D+ + + F D II+ AA + VD++ ++P I N G ++ +AA D Sbjct: 61 DICDYERMKALFAENHIDGIIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKD 120 Query: 90 SI-GIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ G ++STD V+ L E +P +P + Y SK + + V +Y N Y Sbjct: 121 NMQGKRFYHVSTDEVYGALEIGEALFTEQTPYDPQSPYSASKASSDHFVRAYHNTY 176 >gi|189913302|ref|YP_001964531.1| Capsular polysaccharide biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167781370|gb|ABZ99667.1| Capsular polysaccharide biosynthesis protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 658 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 17/130 (13%) Query: 31 RPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 RP I D+ ++ F P V+ + AAY V E P A N G +A Sbjct: 369 RPVIADVKNLSRISAVFEEHRPSVVFHSAAYKHVPMMEINPSEAILNNVMGTKNVADVCR 428 Query: 90 SIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRT 147 IG+ + ISTD NP+N+ G SK A E + + N I T Sbjct: 429 LIGVERFVLISTD--------------KAVNPVNVMGASKRAAEIYLQHISQNSRIKFIT 474 Query: 148 AWVYSIFGSN 157 ++ GSN Sbjct: 475 VRFGNVLGSN 484 >gi|153004763|ref|YP_001379088.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152028336|gb|ABS26104.1| NAD-dependent epimerase/dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 312 Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 8/111 (7%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEG-----AGAIAKAADSIGIPCIYISTDYVFD 105 P VI + AA V ++ EP +N G GA+ A S+ S + Sbjct: 68 PQVICHQAAQIDVRRSMAEPRFDADVNVGGLLNLMQGAVE--AKSVEHVLFASSGGATYG 125 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG 155 R P E P P++ YG +K A E + Y NY I TA YS ++G Sbjct: 126 DTDRVPTPEDHPQLPVSHYGAAKAASELYLNVYRANYGIPFTALRYSNVYG 176 >gi|313622441|gb|EFR92891.1| UDP-glucose 4-epimerase [Listeria innocua FSL J1-023] Length = 328 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + F S D +I+ AA + V ++ + P + N G + + + G+ I S+ Sbjct: 61 TVFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVMEQFGVKHIVFSSSAA 120 Query: 104 FDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 G R PI E PT+P + YG++KL E+ + +Y +V LR Sbjct: 121 TYGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGMKFVALR 168 >gi|302540005|ref|ZP_07292347.1| putative SnoG protein [Streptomyces hygroscopicus ATCC 53653] gi|302457623|gb|EFL20716.1| putative SnoG protein [Streptomyces himastatinicus ATCC 53653] Length = 290 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML--RLAKE 168 P+ E +P PL +YG +KLAG V + V+LR V++ G + L RLA E Sbjct: 162 PLGENAPARPLGVYGATKLAGTLAVLDSGLDAVVLR---VFNPLGPGSPAASLPGRLAAE 218 Query: 169 RR 170 R Sbjct: 219 LR 220 >gi|223985392|ref|ZP_03635457.1| hypothetical protein HOLDEFILI_02763 [Holdemania filiformis DSM 12042] gi|223962637|gb|EEF67084.1| hypothetical protein HOLDEFILI_02763 [Holdemania filiformis DSM 12042] Length = 340 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 D+++N AA T VD++ ++PE+ + N G + A GI + +STD V+ L Sbjct: 76 DMVVNFAAETHVDRSVEDPEVFITTNILGTQVLMDACRKYGIQRYHQVSTDEVYGDLPLD 135 Query: 111 PIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 D F +P + + Y +K + V +Y + Sbjct: 136 RPDLFFTEETPIHTSSPYSAAKAGADLLVQAYHRTF 171 >gi|254523027|ref|ZP_05135082.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas sp. SKA14] gi|219720618|gb|EED39143.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas sp. SKA14] Length = 326 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPC----- 95 A PD ++N AA + VD++ D P N G + +A +P Sbjct: 41 ARLLAEHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPAEQGSA 100 Query: 96 ---IYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 101 FRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTY 151 >gi|170769842|ref|ZP_02904295.1| dTDP-glucose 4,6-dehydratase [Escherichia albertii TW07627] gi|170121280|gb|EDS90211.1| dTDP-glucose 4,6-dehydratase [Escherichia albertii TW07627] Length = 355 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + A F PD +++ AA + VD++ D P N G + +AA + Sbjct: 58 VDVCDRAELARVFARHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 TLADDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|189912976|ref|YP_001964865.1| Nucleoside-diphosphate sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777652|gb|ABZ95952.1| Nucleoside-diphosphate sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] Length = 627 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 17/130 (13%) Query: 31 RPDI-DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 RP I D+ ++ F P V+ + AAY V E P A N G +A Sbjct: 338 RPVIADVKNLSRISAVFEEHRPSVVFHSAAYKHVPMMEINPSEAILNNVMGTKNVADVCR 397 Query: 90 SIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRT 147 IG+ + ISTD NP+N+ G SK A E + + N I T Sbjct: 398 LIGVERFVLISTD--------------KAVNPVNVMGASKRAAEIYLQHISQNSRIKFIT 443 Query: 148 AWVYSIFGSN 157 ++ GSN Sbjct: 444 VRFGNVLGSN 453 >gi|188582711|ref|YP_001926156.1| UDP-glucose 4-epimerase [Methylobacterium populi BJ001] gi|179346209|gb|ACB81621.1| UDP-glucose 4-epimerase [Methylobacterium populi BJ001] Length = 330 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 5/106 (4%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 L D I + AA V ++ +P + N A+ + A G+ I+ ST V+ Sbjct: 63 ILRHQIDAIAHFAAKIVVPESVADPLGYYLANTVKTRALIETASRTGVKHFIFSSTAAVY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 P+ E TNP+N YG+SKL E + A++ Y +LR Sbjct: 123 GEPEIVPVPETMATNPINPYGRSKLMSEWMLADAAAAHGFTYGVLR 168 >gi|150376938|ref|YP_001313534.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] gi|150031485|gb|ABR63601.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419] Length = 324 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 9/108 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D++ + AA AE EP +AF + A G + +A + G+ + ++ GL++ Sbjct: 75 DIVFHQAAIRITQCAE-EPRLAFDVLARGTFDVLEATVAAGVSKVIAASSASVLGLAQCF 133 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYS 152 TP +E P N IYG +K E + S+ YV LR VY Sbjct: 134 PTP-EEHHPYNNRTIYGAAKAFNEGLLRSFAEMYGLKYVALRYFNVYG 180 >gi|15895599|ref|NP_348948.1| dTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum ATCC 824] gi|15025341|gb|AAK80288.1|AE007734_2 DTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum ATCC 824] gi|325509747|gb|ADZ21383.1| DTDP-D-glucose 4,6-dehydratase [Clostridium acetobutylicum EA 2018] Length = 351 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 10/114 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS---- 90 D+ + F ++ D ++N AA + VD++ PEI N G + A + Sbjct: 60 DICDKEAIEDIFKNYDIDYVVNFAAESHVDRSIKMPEIFVQTNVLGTVNLLNIAKNNWET 119 Query: 91 -----IGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASY 138 G + ISTD V+ L + E +P NP + Y SK + + V +Y Sbjct: 120 KDGFKAGKKYLQISTDEVYGSLGKEGFFTETTPLNPHSPYSASKASADMIVKAY 173 >gi|183222218|ref|YP_001840214.1| putative nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912271|ref|YP_001963826.1| NDP-sugar dehydratase or epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776947|gb|ABZ95248.1| NDP-sugar dehydratase or epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780640|gb|ABZ98938.1| Putative nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 320 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 22/185 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR-----PDI------------DLLKPKDFASF 45 L+ G +G + ++L + D +II +G P+I DL + + Sbjct: 5 ILITGGSGVLGKALIEKLIPDTKIIAIGTNHSHFPEIIRHHKHFKFYERDLNLINNASDL 64 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 LS D+I++ AA V A+ E + IN + A IP ++S+ V+ Sbjct: 65 NLSEPIDLILHLAA--VVSGAKVEEATYYQINVYATKHLVSFAIQNHIPHFGFVSSISVY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G T + S N IY K+K E+ V NY +LR A +Y G+ +S L+ Sbjct: 123 -GSKDTELTLKSERNGKTIYAKTKSLAEDFVFQSGQNYSVLRLASIYGK-GTKSFVSKLK 180 Query: 165 LAKER 169 ++ Sbjct: 181 ALMQK 185 >gi|148229632|ref|NP_001085067.1| hypothetical protein LOC432137 [Xenopus laevis] gi|47940257|gb|AAH72143.1| MGC80057 protein [Xenopus laevis] Length = 348 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 VQ++ + ++D+L F +++ A AV ++ +P + + +N G Sbjct: 52 VQEIVGKTIEFEEVDMLDRVALDELFNKHKFSAVLHLAGLKAVGESVQKPLLYYKVNLTG 111 Query: 81 AGAIAKAADSIGIPCI-YISTDYVFDGLSRTPIDEFSP----TNPLNIYGKSKLAGEEKV 135 + + +S G+ I + S+ V+ S PIDE P TNP YGK+K EE + Sbjct: 112 TIQLLEVMNSHGVKNIVFSSSATVYGDPSYLPIDESHPVGGCTNP---YGKTKYFIEEMI 168 >gi|158318391|ref|YP_001510899.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] gi|158113796|gb|ABW15993.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec] Length = 359 Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 16/125 (12%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFL 47 MK V G +G I + + V +++ GRPD ID+L + F Sbjct: 1 MKIAVTGGSGFIGGHVVDRLLDAGHKVLSLDLSTCGRPDPRAAYREIDVLDLEALVDAFT 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 DV+ + A + VD A +P +N EG G + +AA G+ ++ ST +V+ Sbjct: 61 GV--DVVFHIAGMSNVDFAFADPVRTVRLNVEGTGKVCEAARRTGVRRVVFASTVWVYGA 118 Query: 107 LSRTP 111 ++ P Sbjct: 119 VADVP 123 >gi|302392846|ref|YP_003828666.1| polysaccharide biosynthesis protein CapD [Acetohalobium arabaticum DSM 5501] gi|302204923|gb|ADL13601.1| polysaccharide biosynthesis protein CapD [Acetohalobium arabaticum DSM 5501] Length = 616 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 15/88 (17%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + PDV+ + AA+ V E PE A N G +A+ AD + + ISTD Sbjct: 351 FERYQPDVVFHAAAHKHVPLMEHNPEEAVKNNIFGTKRLAETADECNVERFVLISTD--- 407 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 NP N+ G +K E Sbjct: 408 -----------KAVNPTNVMGSTKRTAE 424 >gi|260911724|ref|ZP_05918300.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 472 str. F0295] gi|260634149|gb|EEX52263.1| dTDP-glucose 4,6-dehydratase [Prevotella sp. oral taxon 472 str. F0295] Length = 382 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPC 95 F D ++N AA + VD++ ++P++ S+N G + AA D G P Sbjct: 72 GLFADNDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARKAWVTGKDKTGYPT 131 Query: 96 I-------YISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L T E +P P + Y SK + + V +Y + Y Sbjct: 132 WKTGKRYHQVSTDEVYGSLGDTGYFMETTPLCPHSPYSASKASADMFVMAYHDTY 186 >gi|260162545|dbj|BAI43787.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae] Length = 354 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------- 87 D+ A+ F F PD++++ AA + VD++ D P N G + +A Sbjct: 58 DITDAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSG 117 Query: 88 ---ADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 A +ISTD V+ L T E +P P + Y SK + V ++ Y Sbjct: 118 LGEAQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTY 177 >gi|253581957|ref|ZP_04859181.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] gi|251836306|gb|EES64843.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] Length = 329 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 17/168 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEII---RVGRPDI----------DLLKPKDFAS 44 M LV G G I ++ + +DV ++ + G D DL + Sbjct: 1 MTILVCGGAGYIGSHVTRALIDSGEDVIVLDNLQTGHVDAVHEKAKLVLGDLRDNEFMEK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F D +I+ AA++ V ++ +EP F N G + K + ++ ST Sbjct: 61 VFKDNKIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKTMKKYNVHKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E T P N YG+SKLA E+ + Y I TA Y Sbjct: 121 YGEPENIPILENDKTFPTNPYGESKLAVEKMLKWCDKAYGIKYTALRY 168 >gi|238755770|ref|ZP_04617102.1| dTDP-glucose 4,6-dehydratase [Yersinia ruckeri ATCC 29473] gi|238705997|gb|EEP98382.1| dTDP-glucose 4,6-dehydratase [Yersinia ruckeri ATCC 29473] Length = 338 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + PD +++ AA + VD++ D P N G + +AA Sbjct: 41 VDICDRAELDRVFAHYQPDAVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 100 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 101 ALAAEQKRAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRT 160 Query: 142 Y 142 Y Sbjct: 161 Y 161 >gi|152980429|ref|YP_001352334.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] gi|151280506|gb|ABR88916.1| UDP-glucose 4-epimerase [Janthinobacterium sp. Marseille] Length = 339 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + DL F ++ D +++ A AV ++ EP + N EG+ + + G Sbjct: 56 EADLRDRSAMEEIFSAYDFDAVVHFAGLKAVGESVAEPLRYYDNNVEGSLVLFQVMAKYG 115 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + ++ S+ V+ + PI E P N YG+SKL EE + Sbjct: 116 VKSLVFSSSATVYGDPATVPIVEDFPLAATNPYGRSKLMIEEML 159 >gi|104304777|gb|ABF72482.1| WbmG [Bordetella parapertussis] Length = 310 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F SF P +++ AA A +D E A + N +G+ +AKAA G+ + T + Sbjct: 64 FDSFKPTHVVHSAA--AYKDPDDWAEDA-ATNVQGSINVAKAASKAGVKRLLNFQTALCY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + PI SPT P YG SK AGE + V LR A V Sbjct: 121 GRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANV 166 >gi|39945784|ref|XP_362429.1| hypothetical protein MGG_08012 [Magnaporthe oryzae 70-15] gi|145019246|gb|EDK03474.1| hypothetical protein MGG_08012 [Magnaporthe oryzae 70-15] Length = 369 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 11/134 (8%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----DVIINPAAYTAVDKAEDEPEI 72 S++ + +E+I RP + D A+ F D +I+ AA AV ++ + P Sbjct: 40 SAVAIDRIELICGKRPAFHNVDITDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTP----IDEFSPTNPLNIYGK 126 + +N G+ ++ ++ + C ++ S+ V+ +R P I E P P N YG+ Sbjct: 100 YYRVNVGGSISLLRSMQKHNV-CNIVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGR 158 Query: 127 SKLAGEEKVASYTN 140 +K E+ ++ + N Sbjct: 159 TKSTIEDVISDHVN 172 >gi|16357461|gb|AAL18013.1| dTDP-glucose 4,6-dehydratase [Aneurinibacillus thermoaerophilus] Length = 341 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DVI+N AA + VD++ EP+ N G + A I + ISTD V+ L T Sbjct: 75 DVIVNFAAESHVDRSITEPDTFVKTNIMGTQILLDIARKCNINKYVQISTDEVYGTLGET 134 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V +Y Y Sbjct: 135 GYFTEETPLAPNSPYSASKASADLLVRAYHETY 167 >gi|83645203|ref|YP_433638.1| nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] gi|83633246|gb|ABC29213.1| Nucleoside-diphosphate-sugar epimerase [Hahella chejuensis KCTC 2396] Length = 305 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 59/128 (46%), Gaps = 11/128 (8%) Query: 52 DVIINPAAYT-AVDKAEDEPEIAF-SINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 DV+I+ AA V + EP F + N E +A A G+ IY+ST V +G Sbjct: 63 DVLIHCAARVHQVKEDAAEPLAEFRAANTEATRLLASWAVKAGVKKFIYLSTIKV-NGEG 121 Query: 109 RTPIDEFSPT---NPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFLLS 161 +P F+P+ NPL+ Y SK GE E A +Y I+R VY L Sbjct: 122 SSPGRPFTPSDPPNPLSPYAISKWEGECALREVAAGAEMSYEIIRPPLVYGEGAKGNLAI 181 Query: 162 MLRLAKER 169 + +LAK R Sbjct: 182 LEKLAKLR 189 >gi|33594857|ref|NP_882500.1| nucleotide sugar epimerase/dehydratase [Bordetella parapertussis 12822] gi|33599130|ref|NP_886690.1| nucleotide sugar epimerase/dehydratase [Bordetella bronchiseptica RB50] gi|3451498|emb|CAA07654.1| putative nucleotide sugar epimerase/ dehydratase [Bordetella bronchiseptica] gi|33564933|emb|CAE39879.1| nucleotide sugar epimerase/dehydratase [Bordetella parapertussis] gi|33575176|emb|CAE30639.1| nucleotide sugar epimerase/dehydratase [Bordetella bronchiseptica RB50] Length = 310 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F SF P +++ AA A +D E A + N +G+ +AKAA G+ + T + Sbjct: 64 FDSFKPTHVVHSAA--AYKDPDDWAEDA-ATNVQGSINVAKAASKAGVKRLLNFQTALCY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 + PI SPT P YG SK AGE + V LR A V Sbjct: 121 GRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRLANV 166 >gi|327311212|ref|YP_004338109.1| NAD-dependent epimerase/dehydratase [Thermoproteus uzoniensis 768-20] gi|326947691|gb|AEA12797.1| NAD-dependent epimerase/dehydratase [Thermoproteus uzoniensis 768-20] Length = 314 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSRT 110 D + + AA V + EP I F N + + A G + + S+ V+ + Sbjct: 65 DAVFHFAANPEVRVSSTEPRIHFDENVSATFNVLEWARKSGAKAVVFASSSTVYGEAAVL 124 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E +P P+++YG +K AGE +Y Y Sbjct: 125 PTPEDAPIAPISVYGAAKAAGEVLCGAYGRLY 156 >gi|312958394|ref|ZP_07772915.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] gi|311287458|gb|EFQ66018.1| dTDP-glucose 4,6-dehydratase [Pseudomonas fluorescens WH6] Length = 360 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DS 90 D++ ++ F PD I++ AA + VD++ D P N G ++ +AA Sbjct: 58 DIIDQATVSAVLARFEPDAIMHLAAESHVDRSIDGPSDFVQTNIVGTYSLLEAARGYWQQ 117 Query: 91 IGIPC------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P +ISTD V+ L E +P P + Y SK A + V ++ + Y Sbjct: 118 LAEPARRAFRFHHISTDEVYGDLHGVDDLFTEATPYAPSSPYSASKAASDHLVRAWRHTY 177 >gi|88601751|ref|YP_501929.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] gi|88187213|gb|ABD40210.1| NAD-dependent epimerase/dehydratase [Methanospirillum hungatei JF-1] Length = 308 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 12/118 (10%) Query: 96 IYISTDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 ++ ST V+ S P E ++P P+++YG SKLA E +++Y++++ + +W++ Sbjct: 115 VFTSTSTVYGEASVIPTPESYTPMEPVSVYGASKLACEALISAYSHSFSM--RSWIFRFA 172 Query: 155 -------GSNFLLSMLRLAKER-REISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 G + +R KE E+ ++ D T S L++ I I + + D Sbjct: 173 NIIGARSGHGVITDFIRKLKENPHELEILGDGNQT-KSYLEVRECIRAIMYVVSHTRD 229 >gi|46241717|gb|AAS83102.1| putative sugar nucleotide epimerase/dehydratase [Azospirillum brasilense] Length = 360 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV ++ AA V AE P N GA + +AA + G+ I +STD Sbjct: 109 DVCVHAAALKHVPAAEYNPMECIHTNVYGAENVVRAALNTGVKRVIALSTDKA------- 161 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 NP+N+YG SKLA ++ Sbjct: 162 -------ANPVNLYGASKLASDK 177 >gi|87123107|ref|ZP_01078958.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RS9917] gi|86168827|gb|EAQ70083.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. RS9917] Length = 370 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 18/149 (12%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 V+ G+ A + C +++RV DL + A PD++++ AA + VD Sbjct: 67 VLAQLGERASTSEGECRH--QLLRV-----DLADAQATAEAVRLADPDLVLHLAAESHVD 119 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADS----------IGIPCIYISTDYVFDGLS-RTPID 113 ++ PE S N G + +A + +ISTD VF L Sbjct: 120 RSIAGPEAFISSNVTGTLHLLQAVRAHWEQLAGERQANFRMHHISTDEVFGSLGPEGRFS 179 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P +P + Y SK A + V ++ + Y Sbjct: 180 ETTPYDPRSPYSASKAASDHLVNAWHHTY 208 >gi|330465684|ref|YP_004403427.1| UDP-glucose 4-epimerase [Verrucosispora maris AB-18-032] gi|328808655|gb|AEB42827.1| UDP-glucose 4-epimerase [Verrucosispora maris AB-18-032] Length = 327 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 15/145 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-----PDIDLLKP--KDFASFFL 47 MK LV G G I ++ M + ++ +R G PD ++ D A Sbjct: 1 MKLLVTGGAGFIGSVVTRMLLDAGHQVVVLDDLRTGHREALAPDATFVEAGIHDAARVLT 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + D +++ AA A ++ PE + N G+ A+ A + G+P ++ ST V+ Sbjct: 61 PEAGFDGVLHFAALIAAGESMVAPERYWHNNTVGSLALLDAVRAAGVPRLVFSSTAAVYG 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLA 130 PI E + P N YG +KLA Sbjct: 121 NPVELPIVETAIKAPTNTYGATKLA 145 >gi|163756055|ref|ZP_02163171.1| hypothetical protein KAOT1_09326 [Kordia algicida OT-1] gi|161323929|gb|EDP95262.1| hypothetical protein KAOT1_09326 [Kordia algicida OT-1] Length = 273 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 15/128 (11%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWV 150 PC ++S+ VFD S P EF T +IYGK K+ E + Y I+R V Sbjct: 91 PCKLFFLSSANVFDAYSSYPSYEFDKTLSESIYGKLKIRIENMLMRLPQKKYAIIRLPMV 150 Query: 151 YSIFGSN--FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 FG+N +L + + +E+ I V + S ++ + I H +I Sbjct: 151 ---FGNNSPRILEIKQCLREKVPIEVFPNLVMNTISDKKLTQQI----HYMINRRKN--- 200 Query: 209 GIFHMTAD 216 GIFH+ A+ Sbjct: 201 GIFHLGAE 208 >gi|111224148|ref|YP_714942.1| hypothetical protein FRAAL4758 [Frankia alni ACN14a] gi|111151680|emb|CAJ63399.1| Hypothetical protein FRAAL4758 [Frankia alni ACN14a] Length = 289 Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 24/154 (15%) Query: 1 MKCLVIGNNGQIAQSL--------SSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFL 47 M+ LV G+ G+I + + D+ G P DL + L Sbjct: 1 MRVLVTGSRGKIGSRVVARLGADGHQVTGTDIVAAHYGPPFDPYLRADLTDYGQAVAVVL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV--F 104 PDV+I+ A + + D + F+ N + +A+A +P IY S++ F Sbjct: 61 RTRPDVVIHTAGIP--EPSHDPGHVIFATNTQSTYHVAEAVARTRVPRLIYTSSETAPGF 118 Query: 105 DGLSRT------PIDEFSPTNPLNIYGKSKLAGE 132 R P+DE P P + YG SK GE Sbjct: 119 VTAERPFLPDYLPVDEDHPLRPQDAYGLSKALGE 152 >gi|332637107|ref|ZP_08415970.1| UDP-galactose 4-epimerase [Weissella cibaria KACC 11862] Length = 330 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 21/167 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--------------GRP--DIDLLKPKDFAS 44 M LV+G G I + + D + V G P ++D+ Sbjct: 1 MAILVLGGAGYIGSHMVDTLLSDGRDVVVVDNLLTGHRAAVPAGVPFYEVDIRDKAALRE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + + +++ AA + V ++ +P F N G A+ + + I S+ Sbjct: 61 VFEKENIEQVVHFAASSIVPESMADPLKYFDNNTAGMIALLEVMLEFDVKQIVFSSTAAT 120 Query: 105 DGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 G+ PI E +P NP+N YG+SKL E + +Y +V LR Sbjct: 121 YGIPEENPIKETTPQNPINPYGESKLQMEHIMKWADDAYGLKWVALR 167 >gi|301643908|ref|ZP_07243937.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|301077728|gb|EFK92534.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] Length = 354 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------- 87 D+ A+ F F PD++++ AA + VD++ D P N G + +A Sbjct: 58 DITDAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSE 117 Query: 88 ---ADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 A +ISTD V+ L T E +P P + Y SK + V ++ Y Sbjct: 118 LGEAQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTY 177 >gi|295134104|ref|YP_003584780.1| capsular polysaccharide biosynthesis protein CapD [Zunongwangia profunda SM-A87] gi|294982119|gb|ADF52584.1| capsular polysaccharide biosynthesis protein CapD [Zunongwangia profunda SM-A87] Length = 438 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 15/107 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F F P+++I+ AAY V E+E E N G I A++ + Sbjct: 185 DVTNRERMTAIFEEFKPEIVIHAAAYKHVALLENELEEVIKNNIAGTYIIFYLAETYKVE 244 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 CI +STD P ++ GKSK E+ ++N Sbjct: 245 QCILLSTD--------------KAVEPKSVMGKSKRWAEKLCFWFSN 277 >gi|294793498|ref|ZP_06758635.1| capsular polysaccharide biosynthesis protein Cap5D [Veillonella sp. 3_1_44] gi|294455068|gb|EFG23440.1| capsular polysaccharide biosynthesis protein Cap5D [Veillonella sp. 3_1_44] Length = 608 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 27/164 (16%) Query: 2 KCLVIGNNGQ----IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K L++G+ I Q L ++ QD + + D+ F +++PDV+ + Sbjct: 307 KLLLLGHGENSIYLIHQELRNIAPQDTLVPIIA----DIRDKNQLEQIFKNYNPDVVFHA 362 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFS 116 AA+ V E +P A N G +A A + G+ + ISTD Sbjct: 363 AAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVDRFVMISTD--------------K 408 Query: 117 PTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYSIFGS 156 NP ++ G +K E+ V Y ++ +R V GS Sbjct: 409 AVNPTSVMGATKRVAEKVVLGMNHIYDTKFITVRFGNVLGSRGS 452 >gi|327395969|dbj|BAK13391.1| dTDP-glucose 4,6-dehydratase RffG [Pantoea ananatis AJ13355] Length = 356 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ CV + + R +D+ S F PD +++ AA T Sbjct: 29 VVVVDKLSYAGNLSSLACVTENPRFKFER--VDICDRAALDSVFSQHQPDCVMHLAAETH 86 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI----------YISTDYVFDGLSRTP- 111 VD++ D P N G + +AA +ISTD VF L T Sbjct: 87 VDRSIDGPIAFIETNIVGTYQLLEAARHYWNALTGDRKKNFLFHHISTDEVFGDLDDTSA 146 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y +K + + V ++ Y Sbjct: 147 FFTEDTPYAPSSPYSATKASSDHLVRAWLRTY 178 >gi|309388639|gb|ADO76519.1| polysaccharide biosynthesis protein CapD [Halanaerobium praevalens DSM 2228] Length = 624 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 18/112 (16%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F +SPDV+ + AA+ V E PE A N G +++ A I + ISTD Sbjct: 351 FNEYSPDVVFHAAAHKHVPLMETSPEEAVKNNILGTRNLSQTAADFEIDRFVLISTD--- 407 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 NP N+ G SK A E + + ++T ++ FG+ Sbjct: 408 -----------KAVNPTNVMGASKRAAEMIIQTINKQ---VKTKFMAVRFGN 445 >gi|301162689|emb|CBW22236.1| putative capsular biosynthesis protein [Bacteroides fragilis 638R] Length = 634 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 48/217 (22%), Positives = 82/217 (37%), Gaps = 38/217 (17%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ S F + P + + AAY V ED A +N G +A A G+ Sbjct: 349 DVTNQTRMESIFKDYRPQYVFHAAAYKHVPMMEDNVSEAIQVNVLGTRIMADLAVKYGVE 408 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE-------EKVASYTNNYVILR 146 + +STD NP N+ G SK E +++ Y N+ +++ Sbjct: 409 KFVMVSTD--------------KAVNPTNVMGCSKRLAEIYVQSLAHQLSKYANDGALVK 454 Query: 147 --TAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSAL--QIARAIIQI---AHNL 199 T ++ GSN S++ K++ E G P + Q+ R + I + Sbjct: 455 FITTRFGNVLGSNG--SVIPRFKQQIEK-------GGPVTVTHPQVIRYFMTIPEACQLV 505 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 +E G ++ G PV D A + + S ++ Sbjct: 506 LEAGSMGHGGEIYIFDMGNPVKIVDLARRMIYLSGQK 542 >gi|284164513|ref|YP_003402792.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284014168|gb|ADB60119.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 325 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AA T D + F++N +G + AA + ++ S+ + + Sbjct: 72 DRVIHLAAITGASSTHDRRDETFAVNYDGTENVVTAAGKFDVDSVVFASSCNNYGRAASR 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV 135 IDE + PLN Y +SK+ EE V Sbjct: 132 NIDETTTPEPLNPYAESKVQAEELV 156 >gi|284006580|emb|CBA71841.1| dTDP-D-glucose-4,6-dehydratase [Arsenophonus nasoniae] Length = 355 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-------DSIGIPCI-- 96 F + PD +++ AA + VD++ D P N G + +AA D P Sbjct: 70 FAQYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYHLLEAARNYWNHLDQQKKPLFRF 129 Query: 97 -YISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +ISTD V+ L T E +P P + Y SK + + V ++ Y Sbjct: 130 HHISTDEVYGDLHTTEGLFTETTPYAPSSPYSASKASSDHLVRAWQRTY 178 >gi|126662219|ref|ZP_01733218.1| putative capsular biosynthesis protein [Flavobacteria bacterium BAL38] gi|126625598|gb|EAZ96287.1| putative capsular biosynthesis protein [Flavobacteria bacterium BAL38] Length = 493 Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 15/100 (15%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ ++F + F + P++I + AAY V E + A +N G A G+ Sbjct: 220 VDVTNLEEFETVFKKYRPEIIFHAAAYKHVPLLEKNFKQAIKVNIFGTKICLDLAMKYGV 279 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 +Y+STD NP NI G SK E Sbjct: 280 NKFVYVSTD--------------KAVNPTNIMGASKRFAE 305 >gi|185479423|gb|ACC77730.1| hypothetical protein [Campylobacter jejuni] Length = 323 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Query: 33 DIDLLKPKDFASFF---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 DI+++ SFF ++ + D I + A A+ + P+ N G + +AA Sbjct: 51 DIEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQGYVDTNVNGTLNMLEAAK 110 Query: 90 SIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I I+ ST V+ PIDE P P + Y SK+A + SY N++ Sbjct: 111 KNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|167623324|ref|YP_001673618.1| polysaccharide biosynthesis protein CapD [Shewanella halifaxensis HAW-EB4] gi|167353346|gb|ABZ75959.1| polysaccharide biosynthesis protein CapD [Shewanella halifaxensis HAW-EB4] Length = 333 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 15/90 (16%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +I+ AA V AE P N GA + KAA G+ I +STD Sbjct: 76 DFVIHAAALKQVPAAEYNPMECIKTNIHGAENVIKAAIENGVEKVIALSTD--------- 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 NP+N+YG +KLA ++ + N Sbjct: 127 -----KAANPINLYGATKLASDKLFVAANN 151 >gi|146343782|ref|YP_001208830.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] gi|146196588|emb|CAL80615.1| dTDP-D-glucose 4,6-dehydratase [Bradyrhizobium sp. ORS278] Length = 357 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 11/121 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ F + PD ++N AA + VD++ D P N G + + A Sbjct: 63 DICDAAALRKLFDKYQPDAVMNLAAESHVDRSIDGPGEFIQTNIVGTFTLLQEALRHFRS 122 Query: 89 ----DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 G ++ISTD VF L T + E + P + Y SK + + V ++ Y Sbjct: 123 LSPEKRAGFRFLHISTDEVFGTLGDTGLFTETTAYAPNSPYSASKASSDHLVRAWRETYE 182 Query: 144 I 144 + Sbjct: 183 L 183 >gi|116625283|ref|YP_827439.1| dTDP-glucose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] gi|116228445|gb|ABJ87154.1| dTDP-glucose 4,6-dehydratase [Candidatus Solibacter usitatus Ellin6076] Length = 339 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 25/167 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR----PDIDLLKPKDFASFF-------- 46 MK LV G G I + M + D+ ++ + + +++ L P D + + Sbjct: 1 MKILVTGGAGFIGSAFVRMAIAETDLHVVNLDKLTYAGNLENLAPVDGSDRYRFVHGDIC 60 Query: 47 ---------LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 PD I++ AA + VD++ PE N G + +AA I + Sbjct: 61 DAALVEATLAEERPDAIVHFAAESHVDRSILSPEPVVRTNYNGTFTLLEAARRQKIARFV 120 Query: 97 YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++STD V+ L + DE NP + Y SK A + SY Y Sbjct: 121 HVSTDEVYGSLEAPAEADEAYVLNPSSPYSASKAASDLLARSYFVTY 167 >gi|149925693|ref|ZP_01913957.1| hypothetical protein LMED105_05697 [Limnobacter sp. MED105] gi|149825810|gb|EDM85018.1| hypothetical protein LMED105_05697 [Limnobacter sp. MED105] Length = 294 Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%) Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLSRTPIDEFS 116 AA +V ++ + P +FSIN EG + +A+ G ++ S+ V+ P+ E Sbjct: 61 AALVSVPQSIERPTESFSINLEGTLNLLEASRKQGNKKIVFASSAAVYGNRHSYPVSETM 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNY 142 P++ YG KL E+ + N Y Sbjct: 121 AGQPISPYGLHKLMCEQHAELFANLY 146 >gi|320655329|gb|EFX23271.1| dTDP-glucose 4,6-dehydratase [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 355 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ + A F PD +++ AA + VD++ D P N G + +A Sbjct: 52 RFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 111 Query: 88 ADSIG----------IPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ L T E +P P + Y SK + + V Sbjct: 112 ARAYWNVLTEDKKSVFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLV 171 Query: 136 ASYTNNY 142 ++ Y Sbjct: 172 RAWLRTY 178 >gi|284008844|emb|CBA75633.1| NAD-dependent epimerase/dehydratase [Arsenophonus nasoniae] Length = 317 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%) Query: 5 VIGNNG----QIAQSLSSMCVQDVEIIRVGR----PDIDLLKPKDFASFFLSFSPD--VI 54 ++G +G ++A L+S + D +II + + PD L A L D +I Sbjct: 4 ILGGSGFIGTRLANQLASQHI-DFKIIDIKKSQLHPDKWLFGDVTKAETLLEPLKDASII 62 Query: 55 INPAAYTAVDKAEDE---PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 IN AA + +D + + +N +GA + + A+ + I I ++ G Sbjct: 63 INLAA-----QHQDNVHPTSLYYDVNVDGAKNVCQVAEQLNIKQIIFTSSVAVYGFVAQE 117 Query: 112 IDEFSPTNPLNIYGKSKLAGEE 133 E P N YGKSKLA E+ Sbjct: 118 TGEDGKFQPFNDYGKSKLAAEQ 139 >gi|256371148|ref|YP_003108972.1| GDP-mannose 4,6-dehydratase [Acidimicrobium ferrooxidans DSM 10331] gi|256007732|gb|ACU53299.1| GDP-mannose 4,6-dehydratase [Acidimicrobium ferrooxidans DSM 10331] Length = 322 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 12/127 (9%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 +QD I+ G DLL + + P+ + N AA + V + +P + A G Sbjct: 46 IQDDVILEPG----DLLDEASLLAVLRRYEPEEVYNLAAQSFVQTSFGQPVLTGETTALG 101 Query: 81 AGAIAKAADSIGI--PCIYI---STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + + D+I + P I ST +F + TP E +P P + YG +K+ G Sbjct: 102 ---VTRLLDAIRVVNPEIRFYQASTSEMFGKVVETPQRETTPFYPRSPYGVAKVYGHWIT 158 Query: 136 ASYTNNY 142 +Y +Y Sbjct: 159 VNYRESY 165 >gi|215919052|ref|NP_819849.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] gi|206583937|gb|AAO90363.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii RSA 493] Length = 331 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 97 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATK 156 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 157 IAGEAMATAYHHRYGLPFVGLRYMNVYG 184 >gi|115378436|ref|ZP_01465596.1| NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein [Stigmatella aurantiaca DW4/3-1] gi|115364542|gb|EAU63617.1| NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein [Stigmatella aurantiaca DW4/3-1] Length = 264 Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 11/122 (9%) Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--VILRTAWVYSIFGSNFLLSMLRLAKE 168 P E P++ YG+SKL GE V +++ VI+R VY FL ++L +A+ Sbjct: 60 PRREEETPAPVSRYGRSKLGGEAAVREFSDRVPSVIVRPPIVYGPGDQEFLPALLPMARL 119 Query: 169 RREISVVCDQFGTPTSAL----QIARAIIQIAH-NLIENSDTSLRGIFHMTADGGPVSWA 223 + FG +L + A++ A D G++ M +DG W Sbjct: 120 GLXLK---SGFGPKHYSLIHVDDLCTALLAAAERGQTLRQDAPEAGVY-MVSDGSEYRWE 175 Query: 224 DF 225 DF Sbjct: 176 DF 177 >gi|325289029|ref|YP_004265210.1| Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Syntrophobotulus glycolicus DSM 8271] gi|324964430|gb|ADY55209.1| Sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) [Syntrophobotulus glycolicus DSM 8271] Length = 329 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA +A+ E +N G + ++ GI +YIST VF L + Sbjct: 68 DVVVHLAAQLGSWRAKQEDFT--EVNDNGTKFFVEESEMAGIKHFLYISTAGVFGRLKQI 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVAS 137 P DE P +P Y ++K E+ ++ Sbjct: 126 PADETHPCSPRYPYEQTKFRAEQYISQ 152 >gi|322492767|emb|CBZ28045.1| putative GDP-mannose 4,6 dehydratase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 444 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 11/101 (10%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSR 109 DVI++ AA T VD++ + +N G + + A G +++STD V+ Sbjct: 169 DVIVHMAAQTHVDRSFSRSVLFTQVNVVGTHTLLECAREYGQLTRFLHVSTDEVYGETPA 228 Query: 110 T--PIDEFS----PTNPLNIYGKSKLAGEEKVASYTNNYVI 144 T P +E S PTNP Y +K A E V++Y +++ + Sbjct: 229 TAQPANEASRVLCPTNP---YAATKAAAEHLVSAYYHSFKV 266 >gi|283954940|ref|ZP_06372453.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283793550|gb|EFC32306.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 330 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 80 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTALYV 139 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 140 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 171 >gi|254390054|ref|ZP_05005275.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294813513|ref|ZP_06772156.1| Putative GDP-D-mannose dehydratase [Streptomyces clavuligerus ATCC 27064] gi|326442080|ref|ZP_08216814.1| NAD-dependent epimerase/dehydratase [Streptomyces clavuligerus ATCC 27064] gi|197703762|gb|EDY49574.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294326112|gb|EFG07755.1| Putative GDP-D-mannose dehydratase [Streptomyces clavuligerus ATCC 27064] Length = 316 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 18/159 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-IDLLKPKDFASFFLSF---------- 49 MK + G G I +L+ + + +I R+ D + A + F Sbjct: 1 MKIAITGGAGFIGSNLARVLTEQPKITRIQVIDNLSTGSKTSIAGLGIDFFEGDIQDADL 60 Query: 50 ------SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 D +++ AA +V ++ +P + NA G + +AA G + I S+ Sbjct: 61 LDQVFRGADAVVHLAALPSVPRSIRDPLASHQANATGTLQVLEAARRAGGLQVIAASSSS 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 V+ R P E T P++ Y +KLA E + +Y ++ Sbjct: 121 VYGANPRLPKHEDLTTAPMSPYAVTKLATEAYLGAYHHS 159 >gi|261407234|ref|YP_003243475.1| Heparinase II/III family protein [Paenibacillus sp. Y412MC10] gi|261283697|gb|ACX65668.1| Heparinase II/III family protein [Paenibacillus sp. Y412MC10] Length = 835 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 18/104 (17%) Query: 18 SMCVQDVEIIRVGRPDIDLLKPKD-------FASFFLSFSPDVIINPAAYTAVDKAEDEP 70 SM D EI+ V I LKP + F F V++ PA A K +D P Sbjct: 41 SMTCSDPEIVEVNGSVITGLKPGETEIAVDFLDDRFSEFKWKVLVRPAGQPAKLKLKDRP 100 Query: 71 EIAFSIN---------AEGAGAIAKAADSIGIPCIYIST--DYV 103 +I FSI+ G+ A+A D+ G+ Y++ DYV Sbjct: 101 KILFSIDELADFLDRIKRDDGSSARAIDASGLWAGYLAKADDYV 144 >gi|157964413|ref|YP_001499237.1| dTDP-4-dehydrorhamnose reductase [Rickettsia massiliae MTU5] gi|157844189|gb|ABV84690.1| dTDP-4-dehydrorhamnose reductase [Rickettsia massiliae MTU5] Length = 288 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD++IN ++P A IN+ +A + I+ISTD VF G ++ Sbjct: 74 PDIVINCIGIVKQLADSNDPLKALPINSLLPHRLANLCKLVNSRLIHISTDCVFSG-TKG 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 E ++ ++YG+SK GE Sbjct: 133 NYKESDFSDCYDLYGRSKFLGE 154 >gi|60681065|ref|YP_211209.1| putative DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] gi|60492499|emb|CAH07269.1| putative DNTP-hexose dehydratase-epimerase [Bacteroides fragilis NCTC 9343] Length = 302 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 52 DVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLS 108 DVI++ A ++ K E E + F +N +G + A + GIP I+IST V+ S Sbjct: 57 DVILHVAGKAHSLPKTEAEKRLFFDVNLQGTKNLCTALEQSGIPKSFIFISTVAVYGCDS 116 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEE 133 I E P N Y SK+ E+ Sbjct: 117 GENITEEYPLNGTTPYALSKIKAEK 141 >gi|23100338|ref|NP_693805.1| nucleotide sugar epimerase [Oceanobacillus iheyensis HTE831] gi|22778570|dbj|BAC14839.1| nucleotide sugar epimerase [Oceanobacillus iheyensis HTE831] Length = 340 Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F + P +++N AA V + + P++ N G I +A + IY S+ Sbjct: 75 SIFEEYKPSIVVNLAAQAGVRYSIENPDVYMQSNVIGFYNILEACRHHLVDHLIYASSSS 134 Query: 103 VFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 V+ + P +E NP+++Y +K + E +Y++ Y I LR VY G Sbjct: 135 VYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYGIPATGLRFFTVYGPMG 192 >gi|153952532|ref|YP_001397595.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. doylei 269.97] gi|152939978|gb|ABS44719.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 323 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 73 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 133 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|163847866|ref|YP_001635910.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222525739|ref|YP_002570210.1| dTDP-glucose 4,6-dehydratase [Chloroflexus sp. Y-400-fl] gi|163669155|gb|ABY35521.1| dTDP-glucose 4,6-dehydratase [Chloroflexus aurantiacus J-10-fl] gi|222449618|gb|ACM53884.1| dTDP-glucose 4,6-dehydratase [Chloroflexus sp. Y-400-fl] Length = 337 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDG 106 S++ D I+N AA T VD++ P+ N G A+ + A + + ISTD V+ Sbjct: 73 SYNIDTIVNFAAETHVDRSIMAPDAVVRTNVNGTWALLEVAREFQLERFHQISTDEVYGA 132 Query: 107 L-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + + E P P + Y SK E V +Y Y + T Sbjct: 133 IPAPRRSREGDPLEPRSPYSASKAGAEHLVYAYYITYGVPMT 174 >gi|323489092|ref|ZP_08094326.1| GDP-mannose 4,6-dehydratase [Planococcus donghaensis MPA1U2] gi|323397215|gb|EGA90027.1| GDP-mannose 4,6-dehydratase [Planococcus donghaensis MPA1U2] Length = 354 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 35/174 (20%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVE-IIR------VGRPD---IDLLKPKDFASFFLS 48 K L+ G NGQ LS ++ +V IIR GR + I+ LK D +F++ Sbjct: 3 KALITGVNGQDGSFLSDFLLEKGYEVHGIIRRSSSFNTGRIEHLYIEELKSSD--NFYIH 60 Query: 49 F----------------SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + PD I N AA + V + + PE ++ G I +A +G Sbjct: 61 YGDMTDTSNIIRLISEIKPDEIYNLAAMSHVKVSFETPEYTADVDGIGTLRILEAVRILG 120 Query: 93 IPC---IY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + IY ST ++ + P E +P P + YG +KL G +Y +Y Sbjct: 121 LEKKTRIYQASTSELYGKVQEVPQRETTPFYPRSPYGVAKLYGYWITKNYRESY 174 >gi|304316176|ref|YP_003851321.1| UDP-glucose 4-epimerase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777678|gb|ADL68237.1| UDP-glucose 4-epimerase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 329 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + F + +I+ AA++ V ++ +P + N G + K G+ Sbjct: 50 DLRDSEFMDKIFEQNDIEAVIDFAAFSLVGESVGKPLEYYENNVYGTMCLLKKMVKYGVK 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 ++ ST + R PI E T P N YG++KLA E+ + +Y +V+LR Sbjct: 110 KIVFSSTAATYGEPERIPIKEEDSTVPTNPYGETKLAVEKMLKWCDNAYGIKHVVLR 166 >gi|238753857|ref|ZP_04615217.1| hypothetical protein yruck0001_6290 [Yersinia ruckeri ATCC 29473] gi|238707845|gb|EEQ00203.1| hypothetical protein yruck0001_6290 [Yersinia ruckeri ATCC 29473] Length = 449 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%) Query: 192 IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY----IFWESAERGGPYSKVYRIF 247 + Q+ HNL+ENS T D G ++ + A+ ++W+ +E G ++ RIF Sbjct: 338 LTQLIHNLMENS-------LRYTNDRGQLTISIHADENHLSLYWQDSEPGISDEQLQRIF 390 Query: 248 TKQYPTKAHRPAYSCLDCSKLANTHNI 274 + Y T++ R S LA HNI Sbjct: 391 ERFYRTESSRNRASGGSGLGLAICHNI 417 >gi|156740785|ref|YP_001430914.1| polysaccharide biosynthesis protein CapD [Roseiflexus castenholzii DSM 13941] gi|156232113|gb|ABU56896.1| polysaccharide biosynthesis protein CapD [Roseiflexus castenholzii DSM 13941] Length = 325 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 16/95 (16%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 + D++++ AA V E P A N GA + AA +G+ + ISTD Sbjct: 75 YGVDIVVHAAALKQVPACEYNPIEAVMTNINGARNVIDAAIDMGVKKVVAISTD------ 128 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 NP+N+YG +KL EK+ +N+Y Sbjct: 129 --------KAVNPVNLYGATKLCA-EKLFIQSNSY 154 >gi|3033515|gb|AAC12869.1| dTDP-D-glucose-4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 357 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ V D R +D+ + F ++ P ++++ AA + Sbjct: 31 VVVVDKLTYAGNLSSLAPVADSS--RFAFEQVDICDRAELDRVFTAYQPALVMHLAAESH 88 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRTP- 111 VD++ D P N G + +A AD +ISTD VF L T Sbjct: 89 VDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADADKNAFRFHHISTDEVFGDLHGTDD 148 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 149 LFTETTPYAPSSPYSASKASSDHLVRAWLRTY 180 >gi|13476288|ref|NP_107858.1| lipopolysaccharide biosynthesis protein [Mesorhizobium loti MAFF303099] gi|14027049|dbj|BAB54003.1| lipopolysaccharide biosynthesis protein [Mesorhizobium loti MAFF303099] Length = 662 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PD+I + AA V E+ E A N G A+ A G+ Sbjct: 362 VDVADRRQMTRVVTEFKPDIIFHAAALKHVPLLEENWESAIQTNVFGTLVCAEVAAKCGV 421 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 P + IS+D D P ++ G +K A E+ V++ ++ I Sbjct: 422 PQFLLISSDKAVD--------------PTSVLGITKRAAEQLVSALHESHAI 459 >gi|19551573|ref|NP_599575.1| nucleoside-diphosphate-sugar epimerase [Corynebacterium glutamicum ATCC 13032] gi|62389221|ref|YP_224623.1| dTDP-glucose 4,6-dehydratase [Corynebacterium glutamicum ATCC 13032] gi|21323087|dbj|BAB97716.1| Nucleoside-diphosphate-sugar epimerases [Corynebacterium glutamicum ATCC 13032] gi|41324554|emb|CAF18894.1| PUTATIVE DTDP-GLUCOSE 4,6-DEHYDRATASE [Corynebacterium glutamicum ATCC 13032] Length = 311 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 24/165 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR---------------PDIDLLKP 39 M+ +V G G I L + +++ ++ + GR + DLL Sbjct: 1 MRTVVTGGAGFIGSHLVDLLIKEGHEVVVIDNLSRGRLENLSDAEATGKLTFVEADLLD- 59 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 DF F + P+VI + AA V + +P N IA AA G+ + + Sbjct: 60 VDFNEFLGTHKPEVIFHLAAQIDVRHSVVDPLHDAETNILSTIRIADAARQHGVRKVVFT 119 Query: 100 TD--YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ++ S P+DE P +P + Y SK++GE + ++ + Y Sbjct: 120 SSGGSIYGEPSEFPVDETVPVDPHSPYAASKVSGEIYLNTFRHLY 164 >gi|317016909|gb|ADU85982.1| putative GDP-D-mannose dehydratase [Dactylosporangium aurantiacum subsp. hamdenensis] Length = 338 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL +PD I N A+ + V + D P+ NA G + + + Sbjct: 58 DLLDSSSLERCMRLAAPDEIYNLASQSHVRISFDIPQFTVQANAMGLLNLLEVYRKVAPE 117 Query: 95 CIYI--STDYVF------DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 + S+ +F DG R E +P NP++ YG SKL G V +Y N++ + Sbjct: 118 ARFYQASSSEMFGNSVDPDGFQR----ETTPMNPVSPYGCSKLFGYSMVRNYRNSFKLF 172 >gi|300857651|ref|YP_003782634.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudotuberculosis FRC41] gi|300685105|gb|ADK28027.1| dTDP-glucose 4,6-dehydratase [Corynebacterium pseudotuberculosis FRC41] gi|302329943|gb|ADL20137.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis 1002] Length = 334 Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI++ AA + D + ++P N G + +AA + ++STD VF L Sbjct: 72 DVIVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAARRHRVHLHHVSTDEVFGDLELED 131 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + F +P NP + Y SK + V ++ ++ + Sbjct: 132 PNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDV 167 >gi|302384838|ref|YP_003820660.1| dTDP-glucose 4,6-dehydratase [Clostridium saccharolyticum WM1] gi|302195466|gb|ADL03037.1| dTDP-glucose 4,6-dehydratase [Clostridium saccharolyticum WM1] Length = 340 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ +PE N G + A + GI + +STD Sbjct: 68 DLFEKEKPDVVVNFAAESHVDRSITDPEAFVRTNVMGTTTLLDACRTYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ PL+ Sbjct: 128 VYGDL---PLDRPDLFFTEETPLH 148 >gi|108762258|ref|YP_632781.1| dTDP-glucose 4,6-dehydratase [Myxococcus xanthus DK 1622] gi|108466138|gb|ABF91323.1| dTDP-glucose 4,6-dehydratase [Myxococcus xanthus DK 1622] Length = 341 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +++ AA + VD++ PE+ + N G + +A+ + G+ + +STD V+ L T Sbjct: 76 DAVMHLAAESHVDRSILGPEVFVTTNVLGTQQLLEASRARGVRRFLMVSTDEVYGSLGPT 135 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E SP P + Y SK + + +Y + + Sbjct: 136 GAFTESSPLQPSSPYSASKTSSDLVALAYHHTF 168 >gi|161830800|ref|YP_001596875.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] gi|161762667|gb|ABX78309.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 331] Length = 330 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 96 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNSRTFYGATK 155 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 156 IAGEAMATAYHHRYGLPFVGLRYMNVYG 183 >gi|51594528|ref|YP_068719.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pseudotuberculosis IP 32953] gi|153949720|ref|YP_001399183.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|170026239|ref|YP_001722744.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|186893526|ref|YP_001870638.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis PB1/+] gi|51587810|emb|CAH19412.1| dTDP-D-glucose-4,6-dehydratase [Yersinia pseudotuberculosis IP 32953] gi|152961215|gb|ABS48676.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis IP 31758] gi|169752773|gb|ACA70291.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis YPIII] gi|186696552|gb|ACC87181.1| dTDP-glucose 4,6-dehydratase [Yersinia pseudotuberculosis PB1/+] Length = 355 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + P+V+++ AA + VD++ D P N G + +AA Sbjct: 58 VDICDRSELDRVFAQYQPNVVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 QLSVEAKQAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|304385094|ref|ZP_07367440.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici DSM 20284] gi|304329288|gb|EFL96508.1| dTDP-glucose 4,6-dehydratase [Pediococcus acidilactici DSM 20284] Length = 331 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK------AADSIGIPCIYIS 99 F F P+V+IN AA + VD++ +P + N G + + A D +S Sbjct: 69 FQDFRPEVVINFAAESHVDQSIADPAKFITTNVNGTFNLIEEFKELWAEDYTHKRFHQVS 128 Query: 100 TDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 TD V+ L T E SP P + Y SK + + V SY + Sbjct: 129 TDEVYGFLGATGSFTEASPYQPSSPYSASKASADLLVQSYGRTF 172 >gi|295136516|ref|YP_003587192.1| hypothetical protein ZPR_4697 [Zunongwangia profunda SM-A87] gi|294984531|gb|ADF54996.1| conserved hypothetical protein [Zunongwangia profunda SM-A87] Length = 371 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Query: 138 YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 +T++YVIL T W + I G+ L+ +L +A E + S + FG + + ++ + Sbjct: 259 WTSSYVILSTGWDFIILGA--LIGILEIA-EFKSWSRFFEPFGKNPLFIFVLSGVVVLTM 315 Query: 198 NLIENSDTSLRG 209 LI DTSL+G Sbjct: 316 GLIFIGDTSLKG 327 >gi|229589464|ref|YP_002871583.1| hypothetical protein PFLU1952 [Pseudomonas fluorescens SBW25] gi|229361330|emb|CAY48196.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 313 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPLNI 123 AE E E+ +N + A+ +A S P ++ ST V+ L P+DE +P P Sbjct: 84 AEREYELGRRVNLDATLALFEALRSQEHPARVVFASTIAVYGALPEGPMDESAPLLPQLS 143 Query: 124 YGKSKLAGEEKVASYTNN 141 YG KL GE + ++ Sbjct: 144 YGTQKLIGELLLEDFSRR 161 >gi|116329232|ref|YP_798952.1| UDP-glucose 4-epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330162|ref|YP_799880.1| UDP-glucose 4-epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121976|gb|ABJ80019.1| UDP-glucose 4-epimerase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123851|gb|ABJ75122.1| UDP-glucose 4-epimerase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 323 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 28/170 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF-------------- 46 M+ L+ G G I + ++ ++ I + +D L+ + A+ F Sbjct: 1 MRLLITGGAGYIGSHIVALLLEKKHEILI----VDNLEKGNEANLFSGPELIQGNIQDDF 56 Query: 47 ---LSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 +FS D + + AA+ A ++ P N G + + G I+ S+ Sbjct: 57 VLEKAFSKPIDAVFHFAAWKAAGESMTNPSKYALNNINGTLKLLTYMEKAGTKKFIFSSS 116 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 V+ PIDE P +P N YG +KLA E+ + Y + N+ LR Sbjct: 117 AAVYGSPQYLPIDEKHPVHPENYYGYTKLAIEQNLKWYESLKGFNFAALR 166 >gi|8133009|gb|AAF73454.1|AF264025_5 putative dTDP-glucose 4, 6-dehydratase [Streptomyces galilaeus] Length = 323 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Query: 31 RPDIDLLKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 R D L +D + L+ P D +++ AA T VD++ EP N G ++ +A+ Sbjct: 54 RLDFRRLDIRDLDAL-LTVVPGHDAVVHFAAETHVDRSLSEPAEFVRTNVLGTQSLLEAS 112 Query: 89 DSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 G+ +++STD V+ +++ E +P P + Y SK AG + VA Sbjct: 113 LRGGVGTFVHVSTDEVYGSIAQGTWTEEAPLLPNSPYAASK-AGSDLVA 160 >gi|91782040|ref|YP_557246.1| putative UDP-glucose 4-epimerase [Burkholderia xenovorans LB400] gi|296160324|ref|ZP_06843142.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] gi|91685994|gb|ABE29194.1| Putative UDP-glucose 4-epimerase [Burkholderia xenovorans LB400] gi|295889535|gb|EFG69335.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. Ch1-1] Length = 303 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP--CIYISTDYVFDGL 107 PD I++ AA + V ++P + +N G + +A ++G P + S+ V+ + Sbjct: 71 PDYIVHLAAISFV--GHNDPLDFYRVNVIGTLNLLEACAAVGHTPRKLLIASSANVYGNV 128 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT-AWVYSIFG--SNFLLSMLR 164 + IDE P P+N Y SK A E V ++ + IL + Y+ G SNFL+ + Sbjct: 129 TSEAIDESFPVTPVNHYAASKAAMETMVRTWFDRLPILIVRPFNYTGRGQASNFLVPKIV 188 Query: 165 LAKERREISV 174 RRE S+ Sbjct: 189 GHFARREASI 198 >gi|53712989|ref|YP_098981.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides fragilis YCH46] gi|253563033|ref|ZP_04840490.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides sp. 3_2_5] gi|265763086|ref|ZP_06091654.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides sp. 2_1_16] gi|52215854|dbj|BAD48447.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides fragilis YCH46] gi|251946809|gb|EES87091.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides sp. 3_2_5] gi|263255694|gb|EEZ27040.1| capsular polysaccharide biosynthesis protein CapD [Bacteroides sp. 2_1_16] Length = 634 Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 24/133 (18%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ S F + P + + AAY V ED A +N G +A A G+ Sbjct: 349 DVTNQTRMESIFKDYRPQYVFHAAAYKHVPMMEDNVSEAIQVNVLGTRIMADLAVKYGVE 408 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE-------EKVASYTNNYVILR 146 + +STD NP N+ G SK E +++ Y N+ +++ Sbjct: 409 KFVMVSTD--------------KAVNPTNVMGCSKRLAEIYVQSLAHQLSKYANDGALVK 454 Query: 147 --TAWVYSIFGSN 157 T ++ GSN Sbjct: 455 FITTRFGNVLGSN 467 >gi|302348167|ref|YP_003815805.1| UDP-glucose 4-epimerase [Acidilobus saccharovorans 345-15] gi|302328579|gb|ADL18774.1| UDP-glucose 4-epimerase [Acidilobus saccharovorans 345-15] Length = 322 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 27/162 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIR-------------VGRPDI-----DLLKP 39 +K LV G G I L + ++ DV ++ +G P + DL P Sbjct: 3 VKFLVTGGAGFIGSHLVELLIEEGHDVTVVDNLSTGRLEFLKDVMGSPHLRFIRADLTSP 62 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 + + ++ D +++ AA V PE + N + + + + G+ I + Sbjct: 63 E--VAREVTKGADAVVHLAANPEVRIGSQSPESIYLQNVQMTYNVLEGMRANGVKAIAFA 120 Query: 100 TDYVFDGLSR---TPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + G +R TP +++ P P+++YG SKLA E ++ Y Sbjct: 121 SSSTVYGEARVIPTP-EDYGPCYPISVYGGSKLASEGLISGY 161 >gi|300855349|ref|YP_003780333.1| UDP-glucose 4-epimerase [Clostridium ljungdahlii DSM 13528] gi|300435464|gb|ADK15231.1| UDP-glucose 4-epimerase [Clostridium ljungdahlii DSM 13528] Length = 328 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 + +I+ AAY+ V ++ DEP F N G + KA + ++ ST + Sbjct: 67 EAVIDFAAYSLVGESVDEPLKYFDNNVGGTLNLLKAMRKHNVKYVVFSSTAATYGEPKSI 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E + T P N YG+SKL E+ Sbjct: 127 PILENAVTYPTNPYGESKLTVEK 149 >gi|298571324|gb|ADI87668.1| NAD-dependent epimerase/dehydratase [uncultured Nitrospirae bacterium MY2-1F] Length = 319 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 39/186 (20%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFL------------- 47 +C+V G G I + L S+ + + ++ + + + P+DF++ + Sbjct: 9 RCVVTGGAGVIGRELLSILHEAEGSVLSIDKNPL----PEDFSATHIIKDLATDSIDEIN 64 Query: 48 SFSPDVIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTD--- 101 F P++ + AA A +++++ PE + + N + + AA S+ ++I Sbjct: 65 DFRPEIFFHLAA--AFERSKESPEFWGVNWKDNTMLSHRMVDAASSLDSLRVFIFASSYL 122 Query: 102 ------YVFDGLSRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI--LRT--AW 149 Y+ D L P+ E SP NP N+ G SK E+++ + Y+ LRT A Sbjct: 123 IYSPALYMSDSLRHEPVYLKEDSPVNPRNVTGASKYYTEKEL-DFIKEYLRPDLRTVSAR 181 Query: 150 VYSIFG 155 +Y ++G Sbjct: 182 IYRVYG 187 >gi|254507692|ref|ZP_05119824.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus 16] gi|219549389|gb|EED26382.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus 16] Length = 338 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +I+ A AV ++ ++P + N G + A +G+ ++ S+ V+ + PI Sbjct: 77 VIHFAGLKAVGESVEKPLEYYDNNVNGTLVLVDAMREVGVKTLVFSSSATVYGDPASVPI 136 Query: 113 DEFSPTNPLNIYGKSKLAGEE 133 E PT+ N YG+SKL EE Sbjct: 137 TEDFPTSATNPYGRSKLMVEE 157 >gi|222824246|ref|YP_002575820.1| UDP-glucose 4-epimerase [Campylobacter lari RM2100] gi|222539468|gb|ACM64569.1| UDP-glucose 4-epimerase [Campylobacter lari RM2100] Length = 328 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ AA V ++ + P + N + + G+ S+ G +TP Sbjct: 73 DAIVHFAASIEVPESMENPLKYYMNNTANTSNLIQTCLETGVKKFIFSSTAATYGEPQTP 132 Query: 112 I-DEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILR 146 I DE SP P+N YG+SKL E+ +A+ Y ILR Sbjct: 133 IVDEQSPLAPINPYGQSKLMSEKVLQDANMANPEFKYCILR 173 >gi|325954152|ref|YP_004237812.1| UDP-glucose 4-epimerase [Weeksella virosa DSM 16922] gi|323436770|gb|ADX67234.1| UDP-glucose 4-epimerase [Weeksella virosa DSM 16922] Length = 338 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + DL + +FF + D II+ AA+ AV ++ P + N G I +A ++ Sbjct: 57 NFDLKDQEQVHTFFANNKIDGIIHFAAHKAVGESVKFPLKYYRNNLVGLLNILEAMETFQ 116 Query: 93 IPC-IYISTDYVFDGLSRTPIDEFSPTNPLNI-YGKSKLAGEEKVASY 138 + I+ S+ V+ + PIDE +PT YG +K GEE + + Sbjct: 117 LDSFIFSSSCTVYGQADKMPIDENTPTQRTESPYGNTKKIGEEILEDF 164 >gi|302205389|gb|ADL09731.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis C231] gi|308275627|gb|ADO25526.1| Putative dTDP- (glucose or rhamnose)-4,6-dehydratase [Corynebacterium pseudotuberculosis I19] Length = 334 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI++ AA + D + ++P N G + +AA + ++STD VF L Sbjct: 72 DVIVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAARRHRVHLHHVSTDEVFGDLELED 131 Query: 112 IDEF---SPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 + F +P NP + Y SK + V ++ ++ + T Sbjct: 132 PNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDVSAT 170 >gi|296283544|ref|ZP_06861542.1| UDP-galactose 4-epimerase [Citromicrobium bathyomarinum JL354] Length = 337 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DLL + FA + +++ A V ++ +P + N + + +AA + G Sbjct: 57 DRDLLA-RVFAEQGMGDGKGAVMHFAGSIIVPESVAKPLWYYENNTVKSRGLIEAAVAAG 115 Query: 93 IPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 +P I S+ G+ +P+ E +PT P+N YG SKL E+ +A + + I Sbjct: 116 VPHILFSSTAATYGVPDVSPVTEQTPTVPINPYGWSKLMTEQMLADTAHAHPI 168 >gi|291571499|dbj|BAI93771.1| putative nucleoside-diphosphate sugar epimerase [Arthrospira platensis NIES-39] Length = 345 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 24/174 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-------- 51 MK L+ G+ G I L M + + E+I + D D+ K F Sbjct: 1 MKLLLTGHKGYIGTILVPMLLAKKHEVIGL---DSDIFKQCTFGEGITEIPEICKDIRDI 57 Query: 52 --------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 D I++ A + PE+ + IN + + +AK A G+ I+ S+ Sbjct: 58 EASDVEGFDAILHLAGLSNDPLGNLNPELTYEINHQASVKLAKLAKEAGVSRYIFSSSCS 117 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI 153 + + E SP NP+ YG SK+ E+ V+ ++ LR A Y + Sbjct: 118 NYGAGGDDWLTEESPFNPVTPYGISKVMVEQDVSKLADDNFSPTFLRNATAYGV 171 >gi|253563173|ref|ZP_04840630.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265762943|ref|ZP_06091511.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|251946949|gb|EES87231.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263255551|gb|EEZ26897.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 298 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%) Query: 52 DVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLS 108 DVI++ A ++ K E E + F +N +G + A + GIP I+IST V+ S Sbjct: 53 DVILHVAGKAHSLPKTEAEKRLFFDVNLQGTKNLCTALEQSGIPKSFIFISTVAVYGCDS 112 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEE 133 I E P N Y SK+ E+ Sbjct: 113 GENITEEYPLNGTTPYALSKIKAEK 137 >gi|209548786|ref|YP_002280703.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534542|gb|ACI54477.1| dTDP-glucose 4,6-dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 351 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 34/176 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRV----------------GRPDIDLLKPK-- 40 M+ LV G G I +L V ++ E++ V P+ L+ Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC 60 Query: 41 ---DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DSIGI 93 F SF PD++++ AA + VD++ N G ++ AA D + Sbjct: 61 DRTGMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARLYWDGLDA 120 Query: 94 P------CIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P +++STD V+ L + +E +P +P + Y SK A + ++ Y Sbjct: 121 PRKSAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTY 176 >gi|218562930|ref|YP_002344709.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|31324512|gb|AAM76273.1| Cj1319-like protein [Campylobacter coli] gi|112360636|emb|CAL35433.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 323 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 73 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 133 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|16081195|ref|NP_393489.1| UDP-glucose 4-epimerase related protein [Thermoplasma acidophilum DSM 1728] gi|10639158|emb|CAC11160.1| UDP-glucose 4-epimerase related protein [Thermoplasma acidophilum] Length = 312 Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 24/198 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR---PDIDLLKP----KDF----ASFFLSFSP 51 ++ G G I ++ M ++D ++ + D +KP K+F S +P Sbjct: 6 VMITGGAGFIGSNMVEMLLEDNDVTVIDNLSIMDDRYIKPFMGKKNFRFIKEDITESVTP 65 Query: 52 ---DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 D++++ AA + V +P I N G + + + I ++ G + Sbjct: 66 GDYDLVVHLAADSDVRNGSVDPTIDLRSNVIGTVNVLEMMRKKDVKDILFASSSTIYGEA 125 Query: 109 R---TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSML- 163 + TP +++ P P++ YG SKL+ E ++SY++ Y I + ++ I G N ++ Sbjct: 126 KVMPTP-EDYGPLLPISSYGASKLSAEAFISSYSHYYGINAKIFRFANIVGKNSTHGVIF 184 Query: 164 ----RLAKERREISVVCD 177 +L K +E+ V+ D Sbjct: 185 DFINKLKKNSKELEVLGD 202 >gi|323704228|ref|ZP_08115807.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536294|gb|EGB26066.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium xylanolyticum LX-11] Length = 304 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++I+ AA + K+ +P + +N G + + + IY S+ V+ Sbjct: 67 DLVIHEAAQVDIQKSIKDPVVDAKVNILGTINLLECCRKYNLKKIIYASSAAVYGDPLYL 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI 153 +DE P++ YG SK GE + Y+ Y ILR + VY I Sbjct: 127 GLDERHRLEPVSFYGISKYTGESYLRIYSKLYGLKYTILRYSNVYGI 173 >gi|320105717|ref|YP_004181307.1| GDP-mannose 4,6-dehydratase [Terriglobus saanensis SP1PR4] gi|319924238|gb|ADV81313.1| GDP-mannose 4,6-dehydratase [Terriglobus saanensis SP1PR4] Length = 358 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI---PCIYISTDYVFDGL 107 PD I N AA + V + +EPE + +A G + +A ++G+ Y ++ GL Sbjct: 79 PDEIYNLAAQSHVQVSFEEPEYTANSDAIGVLRLLEAIRTLGLVEKTRFYQASTSELYGL 138 Query: 108 SR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 R TP E +P P + YG +K+ G +Y +Y I Sbjct: 139 VRETPQTEKTPFYPRSPYGVAKMYGYWITVNYRESYGI 176 >gi|284926543|gb|ADC28895.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni IA3902] Length = 323 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 73 DAIFHLGALIAIPYSYAAPQSYVDTNVNGTLNMLEAAKKNKISHFIHTSTSEVYGTAFYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 133 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|212715413|ref|ZP_03323541.1| hypothetical protein BIFCAT_00308 [Bifidobacterium catenulatum DSM 16992] gi|212661659|gb|EEB22234.1| hypothetical protein BIFCAT_00308 [Bifidobacterium catenulatum DSM 16992] Length = 351 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D I++ AA + D + PE + N EG + +AA + +ISTD V+ L+ Sbjct: 92 DSIVHFAAESHNDNSIANPEPFITTNVEGTFHLLEAARKHDVRFHHISTDEVYGDLALDD 151 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P P + Y SK A ++ V ++ Y + T Sbjct: 152 PCKFTESTPYKPSSPYSASKAASDQLVRAWVRTYGLRAT 190 >gi|182416994|ref|ZP_02948374.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237666204|ref|ZP_04526191.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379170|gb|EDT76672.1| UDP-glucose 4-epimerase [Clostridium butyricum 5521] gi|237658294|gb|EEP55847.1| UDP-glucose 4-epimerase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 327 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 37 LKPKDFAS-FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 ++ K+F S F + D + + AA + V ++ EP + F+ N G + + + + Sbjct: 52 IRDKNFLSNVFKKENIDGVFHFAANSIVGESMKEPLMYFNNNVYGMQILLEVMNEHNVNK 111 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILR 146 ++ ST + + PI E T P N YG++KL E+ + +Y YV LR Sbjct: 112 IVFSSTAATYGEPKQVPITEDMETCPTNTYGETKLVMEKMMKWCDKAYGMKYVALR 167 >gi|326693444|ref|ZP_08230449.1| UDP-glucose 4-epimerase [Leuconostoc argentinum KCTC 3773] Length = 330 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 17/153 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ ++ Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVEAGRDVVVVDALFTGHRDAVHPDAKFYQVDIRDKAALSA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ P F N G + + + I + ST Sbjct: 61 VFDQEDIEQVVHFAAFSIVPESVANPLKYFDNNTSGMVTLLEVMKDHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + PI E P NP+N YG+SKL E+ +A Sbjct: 121 YGNPVNIPIKETDPQNPINPYGESKLMMEKIMA 153 >gi|326775916|ref|ZP_08235181.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] gi|326656249|gb|EGE41095.1| UDP-glucose 4-epimerase [Streptomyces cf. griseus XylebKG-1] Length = 336 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +++ AA V ++ + P + N EG + +AA G+ S+ G+ + Sbjct: 70 VVHLAAKKQVAESVERPLHYYRENVEGLRVLLEAAADSGVGSFLFSSSAAVYGMPDVALV 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS 137 E +P P+N YG++KLAGE V S Sbjct: 130 TEDTPCAPINPYGETKLAGEWLVCS 154 >gi|270294013|ref|ZP_06200215.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D20] gi|317478764|ref|ZP_07937917.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] gi|270275480|gb|EFA21340.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D20] gi|316905099|gb|EFV26900.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_1_36] Length = 358 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R + D+ S PD I N AA + V + Sbjct: 39 NTGRIEHLYFDEWVRDMKQKRTINLHYGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVS 98 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 99 FDVPEYTAETDAVGTLRMLEAVRILGMEKKTRIYQASTSELFGKVQEVPQSETTPFYPRS 158 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 159 PYGVAKQYGFWITKNYRESY 178 >gi|91200270|emb|CAJ73315.1| similar to uridine 5'-diphospho-glucose 4-epimerase [Candidatus Kuenenia stuttgartiensis] Length = 320 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+L K F D I + A + + ++ + ++ +N + +A + Sbjct: 60 DVLNFKKLNDIFRKERFDAIFHLVANSDIKQSAAQTDLDLKLNFMSTYNVLEAMRLNNVN 119 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ ST +F ++ P P++ YG SKLA E +++Y +N+ Sbjct: 120 QIVFASTSAIFGETDEVITEDMGPLIPISFYGASKLAAEAYISAYVHNF 168 >gi|71734317|ref|YP_273224.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554870|gb|AAZ34081.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325866|gb|EFW81926.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320330318|gb|EFW86301.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330882237|gb|EGH16386.1| NAD dependent epimerase/dehydratase family protein [Pseudomonas syringae pv. glycinea str. race 4] Length = 298 Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 17/174 (9%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG-RP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G NG + +++ + Q E++ VG +P +DL PD Sbjct: 7 RALITGINGFTGRFMANELAAQGCEVLGVGSQPSDSPSYYQVDLADVAGLRKLLADTQPD 66 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP-CIYI-STDYVFDGLSR 109 ++++ AA V + + +N G + +A D+ G +P C+ + S+ V+ S Sbjct: 67 IVVHLAALAFV--GHGAADAFYQVNLIGTRNLLEAIDACGKVPDCVLLASSANVYGNASS 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGS--NFLL 160 +DE + P N Y SKLA E + + +++ + Y+ G NFLL Sbjct: 125 GMLDETTQPAPANDYAVSKLAMEYMASLWHAKLPIVIARPFNYTGVGQAENFLL 178 >gi|295134430|ref|YP_003585106.1| dTDP-4-dehydrorhamnose reductase-like protein [Zunongwangia profunda SM-A87] gi|294982445|gb|ADF52910.1| dTDP-4-dehydrorhamnose reductase-like protein [Zunongwangia profunda SM-A87] Length = 271 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 12/137 (8%) Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWV 150 PC I++S+ VFD + P E+ T +IYG+ K+ E + N+ Y ILR V Sbjct: 92 PCKLIFLSSANVFDAFTNYPSYEYDKTLSQSIYGRFKIKIENALLRLPNDKYNILRLPMV 151 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + GS L + L I V + T +I + I I + L+G+ Sbjct: 152 FGQ-GSPRLNEIKTLIDLGEAIEVFPNVVINVTEISKITQQIHYIV-------NRKLQGV 203 Query: 211 FHMTADGGPVSWADFAE 227 FH+ V DF E Sbjct: 204 FHL-GSSDLVHQKDFVE 219 >gi|311742756|ref|ZP_07716565.1| UDP-glucose 4-epimerase [Aeromicrobium marinum DSM 15272] gi|311314384|gb|EFQ84292.1| UDP-glucose 4-epimerase [Aeromicrobium marinum DSM 15272] Length = 317 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 31/239 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M C+VI + ++ + +V +++ LL S + +I+ A + Sbjct: 26 MDCVVIDD---LSSGHAEFVPDEVPLVQA-----SLLDAAAITRAMTDHSVEAVIHLAGF 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTN 119 + D P + N +G + +A ++ G+ ++ S+ VF + E +PT Sbjct: 78 KYAGVSVDRPLHTYQQNVQGTVLLLEAMEANGVDALVFSSSAAVFGTPDVELVTEDTPTR 137 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGS-----------NFLLSMLRLAK 167 P + YG+SKL GE +A + + T+ Y ++ GS N +++ + Sbjct: 138 PESPYGESKLIGEWLIADVGRSSGLRHTSLRYFNVVGSAVPELYDTSPHNLFPLVIKALR 197 Query: 168 ERREISVVCDQFGTPTSA--------LQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 E R + + TP +A A + A L+E +L ++++ + G Sbjct: 198 EGRTPRINGTDYPTPDGTCVRDYIHVADLAEAHVVAARRLVEGE--TLEAVYNLGSGSG 254 >gi|289166476|ref|YP_003456614.1| UDP-galactose-4-epimerase [Legionella longbeachae NSW150] gi|288859649|emb|CBJ13619.1| UDP-galactose-4-epimerase [Legionella longbeachae NSW150] Length = 339 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +IDL F S D++++ A AV + P + N G+ + + + + Sbjct: 56 NIDLRNKDMLFDVFRSSKFDLVVHFAGLKAVSDSCQRPLDYYENNVIGSWNLLQVMNCLN 115 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVA 136 + I S+ G+S+ P+ E P P N YG++K E+ +A Sbjct: 116 VKKIIFSSSATVYGMSQVNPLTEEYPKAPFNPYGQTKSCIEDMIA 160 >gi|271969425|ref|YP_003343621.1| GDP-mannose 4,6-dehydratase [Streptosporangium roseum DSM 43021] gi|270512600|gb|ACZ90878.1| GDP-mannose 4,6-dehydratase [Streptosporangium roseum DSM 43021] Length = 342 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 18/135 (13%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 +QDV+++R DLL S PD + N A + V + ++ E+ + G Sbjct: 48 LQDVQLVRG-----DLLDQGSLISAVEKVQPDEVYNLGAISFVPMSWEQAELTAEVTGMG 102 Query: 81 AGAIAKA-------------ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKS 127 + +A A S I S+ +F + TP E +P +P + YG + Sbjct: 103 VLRMLEAIRVCSGISSSRTAAGSGQIRFYQASSSEMFGQVRETPQTEITPFHPRSPYGVA 162 Query: 128 KLAGEEKVASYTNNY 142 K G +Y +Y Sbjct: 163 KAYGHFLTQNYRESY 177 >gi|254382403|ref|ZP_04997763.1| fclA [Streptomyces sp. Mg1] gi|194341308|gb|EDX22274.1| fclA [Streptomyces sp. Mg1] Length = 314 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 26/158 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + ++ D E++ GR ++DL ++ PD ++ AA Sbjct: 13 RVFVAGHRGLVGSAVVRRLTADGHEVLTRGRSELDLRDAAATGAYLRDVRPDAVVLAAAK 72 Query: 61 TA---------VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-------ISTDYVF 104 V ED +I S+ A A +G CIY IS D + Sbjct: 73 VGGIMANSTYPVQFLEDNLKIQLSVIAGSHEAGVGRLLFLGSSCIYPKLAPQPISEDALL 132 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G PTN Y +K+AG +V SY Y Sbjct: 133 TG-------PLEPTN--EAYALAKIAGIVQVQSYRRQY 161 >gi|218960959|ref|YP_001740734.1| CDP-glucose 4,6-dehydratase [Candidatus Cloacamonas acidaminovorans] gi|167729616|emb|CAO80528.1| CDP-glucose 4,6-dehydratase [Candidatus Cloacamonas acidaminovorans] Length = 365 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 11/121 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI---AKAADSI 91 D+L + F F P+++ + AA T V ++ P+ F IN +G I + ++S+ Sbjct: 77 DILDFNKLSKVFEDFKPEIVFHLAAQTIVLESYQNPKDTFDINVQGTVNILECCRNSNSV 136 Query: 92 GIPCIYISTDYVFDG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 CI +++D ++ ID +P Y SK E SY ++ L Sbjct: 137 K-ACIIVTSDKCYENKEWLWGYREIDRLGGKDP---YSASKACAEFVTYSYLTSFRQLNL 192 Query: 148 A 148 A Sbjct: 193 A 193 >gi|90415471|ref|ZP_01223405.1| hypothetical protein GB2207_09146 [marine gamma proteobacterium HTCC2207] gi|90332794|gb|EAS47964.1| hypothetical protein GB2207_09146 [marine gamma proteobacterium HTCC2207] Length = 280 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%) Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +DF + +PD NP AY + A+ +A+ + A S+ I++S Sbjct: 58 QDFDVVVATLTPDGF-NPEAY----------QRAYVDSAKTLASAMALATSVPKLVIWVS 106 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + V+ +DE SPT L+ GK L E+++ VI+R + +Y Sbjct: 107 STSVYGNCDGDWVDEQSPTTALSFSGKLLLEAEQQITDLPCPTVIVRFSGIY 158 >gi|50123126|ref|YP_052293.1| dTDP-glucose 4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] gi|49613652|emb|CAG77103.1| dTDP-glucose 4,6-dehydratase [Pectobacterium atrosepticum SCRI1043] Length = 355 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+ + A +LSS+ V D R +D+ + F ++ P ++++ AA + Sbjct: 29 VVVVDKLTYAGNLSSLAPVADSS--RFAFEQVDICDRAELDRVFTAYQPALVMHLAAESH 86 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIYISTDYVFDGLSRTP- 111 VD++ D P N G + +A AD +ISTD VF L T Sbjct: 87 VDRSIDGPAAFIETNIVGTYTMLEAARHYWQNLADADKNAFRFHHISTDEVFGDLHGTDD 146 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 147 LFTETTPYAPSSPYSASKASSDHLVRAWLRTY 178 >gi|13507996|ref|NP_109945.1| UDP-glucose 4-epimerase [Mycoplasma pneumoniae M129] gi|2494661|sp|P75517|GALE_MYCPN RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1674276|gb|AAB96224.1| UDP-glucose 4-epimerase [Mycoplasma pneumoniae M129] Length = 338 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL +PDV+ + AA T+V ++ ++P F N G + A + Sbjct: 58 VNLLDRAQLTDTIAQINPDVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQK 117 Query: 94 P--CIYISTDYVFDGLSRTPIDE---FSPTNPLNIYGKSKLAGEEKVASYT 139 P + ST VF S PI E T N YG SK E + + T Sbjct: 118 PIQLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLT 168 >gi|18309268|ref|NP_561202.1| UDP-glucose 4-epimerase [Clostridium perfringens str. 13] gi|168207452|ref|ZP_02633457.1| UDP-glucose 4-epimerase [Clostridium perfringens E str. JGS1987] gi|18143944|dbj|BAB79992.1| UDP-glucose 4-epimerase [Clostridium perfringens str. 13] gi|170661186|gb|EDT13869.1| UDP-glucose 4-epimerase [Clostridium perfringens E str. JGS1987] Length = 328 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI---------DLLKPKDFASF 45 M LV G G I + + +++ + + + G D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E P N YG+SKL E+ + Y I TA Y Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRY 167 >gi|93005454|ref|YP_579891.1| dTDP-glucose 4,6-dehydratase [Psychrobacter cryohalolentis K5] gi|92393132|gb|ABE74407.1| dTDP-glucose 4,6-dehydratase [Psychrobacter cryohalolentis K5] Length = 365 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 30/55 (54%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 +D+ P + A F + PDV+++ AA + VD++ D P+ N G + +AA Sbjct: 57 VDICNPTELARVFERYQPDVVMHLAAESHVDRSIDAPDDFIRTNIVGTYNMLEAA 111 >gi|317503432|ref|ZP_07961471.1| capsular polysaccharide biosynthesis protein Cap5D [Prevotella salivae DSM 15606] gi|315665443|gb|EFV05071.1| capsular polysaccharide biosynthesis protein Cap5D [Prevotella salivae DSM 15606] Length = 643 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 40/153 (26%) Query: 2 KCLVIGNNGQIAQSL----------SSMCVQDVE--------IIRVGRPDID-------L 36 K L+ G+ G I + S M + E +++ PDI + Sbjct: 296 KILITGSAGSIGSEMVRQIASFKPCSMMLIDQAETPQHDIKLLMKNKYPDIKCTIVLTSI 355 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PC 95 K F F PD + + AAY V ED P + N G +A + G+ Sbjct: 356 TKQSRMEKLFSEFRPDYVFHAAAYKHVPMMEDNPSESIQNNVYGTKVVADLSVKYGVKKF 415 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 + ISTD NP N+ G SK Sbjct: 416 VMISTD--------------KAVNPTNVMGCSK 434 >gi|229916911|ref|YP_002885557.1| dTDP-glucose 4,6-dehydratase [Exiguobacterium sp. AT1b] gi|229468340|gb|ACQ70112.1| dTDP-glucose 4,6-dehydratase [Exiguobacterium sp. AT1b] Length = 350 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 24/128 (18%) Query: 31 RPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-- 88 RP ID L F F D +++ AA + VD++ EPE+ S N G + AA Sbjct: 64 RPAIDEL--------FSLFEIDEVVHFAAESHVDRSILEPELFLSTNILGTQVLLDAAMR 115 Query: 89 -------DSIG------IPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEK 134 D + +++STD V+ L T E +P P + Y SK + Sbjct: 116 HWKRYSDDKYSREYRDDVCFVHVSTDEVYGSLGETGFFTEKTPLAPNSPYSASKAGSDLL 175 Query: 135 VASYTNNY 142 V SY Y Sbjct: 176 VRSYHETY 183 >gi|305431627|ref|ZP_07400797.1| NAD-dependent epimerase/dehydratase [Campylobacter coli JV20] gi|304445326|gb|EFM37969.1| NAD-dependent epimerase/dehydratase [Campylobacter coli JV20] Length = 322 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 72 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 131 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 132 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 163 >gi|291007607|ref|ZP_06565580.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 305 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 8/132 (6%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 I++ AA T+V ++ D P ++ N + + A G+ + ST+ V + R I Sbjct: 65 IVHLAAITSVLRSVDRPAETYAANVAVTQELLELARLRGLGQFVLASTNAVVGDIGRGTI 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG------SNFLLSMLRL 165 E P PL YG +K A E ++ Y Y + A ++ I+G +F+ ++R Sbjct: 125 SESLPLRPLTPYGATKAACEMLLSGYAGAYGLATCALRFTNIYGPGMGHKDSFIPRLMRA 184 Query: 166 AKERREISVVCD 177 A + V D Sbjct: 185 ALAGAGVEVYGD 196 >gi|205356823|ref|ZP_03223580.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni CG8421] gi|205345315|gb|EDZ31961.1| putative nucleotide sugar dehydratase [Campylobacter jejuni subsp. jejuni CG8421] Length = 321 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 71 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 131 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 162 >gi|254362238|ref|ZP_04978352.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica PHL213] gi|153093813|gb|EDN74748.1| dTDP-glucose 4,6-dehydratase [Mannheimia haemolytica PHL213] Length = 335 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----DS 90 D+ + F + PDV+++ AA + VD++ N G + +AA D+ Sbjct: 58 DICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEAARAYWDT 117 Query: 91 IGIP------CIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P ++ISTD V+ L+++ E +P NP + Y SK A + ++ Y Sbjct: 118 LPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYSASKAASDHLARAWHRTY 177 >gi|28849802|gb|AAN64559.1| UDP-Gal/UDP-GalNac epimerase [Streptococcus gordonii] Length = 339 Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + D+ + F F P +I+ A AV ++ P + N G + + + + Sbjct: 58 EADICDKEALLKVFKDFKPTGVIHFAGLKAVGESSQIPLTYYENNVAGTLTLLRVMEEVN 117 Query: 93 IP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-----ASYTNNYVILR 146 I+ S+ V+ PI E P + N YG++KL EE + A T N V+LR Sbjct: 118 CKNIIFSSSATVYGDPLTVPILEDFPVSATNPYGRTKLMAEEIMTDIYKADSTWNIVLLR 177 >gi|330941726|gb|EGH44482.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. pisi str. 1704B] Length = 191 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIP 94 F P +++ AA + VD++ PE N G + +AA D Sbjct: 40 LFTEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLETTDKAAFR 99 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 100 FLHVSTDEVYGTLGANDPAFTETTPYQPNSPYSASKAASDHLVRSYHHTY 149 >gi|323705072|ref|ZP_08116648.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535498|gb|EGB25273.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] Length = 329 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 5/100 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 + +I+ AA++ V ++ +P + N G + K G+ ++ ST + R Sbjct: 67 EAVIDFAAFSLVGESVGKPLDYYENNVYGTMCLLKKMVKYGVKKIVFSSTAATYGEPERV 126 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 PI E T P N YG++KLA E+ + +Y +V+LR Sbjct: 127 PIKEDDKTFPTNPYGETKLAVEKMLKWCDNAYGIKHVVLR 166 >gi|309799419|ref|ZP_07693657.1| UDP-glucose 4-epimerase [Streptococcus infantis SK1302] gi|308116952|gb|EFO54390.1| UDP-glucose 4-epimerase [Streptococcus infantis SK1302] Length = 337 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 5/124 (4%) Query: 15 SLSSMCVQD-VEIIRVGRP---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 S SS+ V D +E I RP ++D+ + F S + I+ A Y AV ++ +P Sbjct: 34 SNSSILVLDRIEAITGQRPAFYELDVCDKQGLRKVFEQESIEAAIHFAGYKAVGESVQKP 93 Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKL 129 + + N A+ + + I S+ G+ +++P+ E PT+ N YG +K+ Sbjct: 94 VMYYENNIMSTLALVQVMSEFNVKKIVFSSSATVYGIHNQSPLVETMPTSATNPYGYTKV 153 Query: 130 AGEE 133 E+ Sbjct: 154 MLEQ 157 >gi|147677430|ref|YP_001211645.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146273527|dbj|BAF59276.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 313 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 18/148 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV----GRPDIDLLKP--KDFASFFLSF------- 49 CLV G G I +L+ V+ +RV I+ L+P K+ + Sbjct: 4 CLVTGGAGFIGSNLAIALVEQGHRVRVLDNFATGSIENLRPVFKEIELYRGDLRNLDDVR 63 Query: 50 ----SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 +V+ + AA +V ++ +P A +N G + AA G+ +Y S+ V+ Sbjct: 64 RTAGGAEVVYHLAALPSVPRSVADPLTANEVNITGTLNVFLAARDAGVRRVVYASSSSVY 123 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 P E P P++ Y +KLAGE Sbjct: 124 GNSEDLPKLETMPPRPMSPYAVTKLAGE 151 >gi|94986823|ref|YP_594756.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] gi|94731072|emb|CAJ54435.1| nucleoside-diphosphate-sugar epimerases [Lawsonia intracellularis PHE/MN1-00] Length = 326 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--DSIGIPCIYISTDYVFDGLSR 109 D++ N A T+ + +P IN + +I +A ++ I I+ T ++ Sbjct: 78 DILFNLAGQTSHIDSMIDPYTDLDINCKAQLSILEACKNNNPSIRIIFAGTRQIYGIPQY 137 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 P+DE P P+++ G +K+AGE Y N Y I Sbjct: 138 LPVDEKHPVYPVDVNGINKIAGEWYHILYNNVYGI 172 >gi|298208711|ref|YP_003716890.1| capsular polysaccharide biosynthesis protein CapD [Croceibacter atlanticus HTCC2559] gi|83848636|gb|EAP86505.1| capsular polysaccharide biosynthesis protein CapD [Croceibacter atlanticus HTCC2559] Length = 653 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 46/119 (38%), Gaps = 18/119 (15%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIST 100 S F F DVI + AAY V E+ P A N G +A A + + +ST Sbjct: 359 LQSVFDEFDIDVIYHAAAYKHVPLMENNPHEAILTNILGTKQVADLAAKFKVGHFVMVST 418 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI---LRTAWVYSIFGS 156 D NP N+ G SK A E V S N + T ++ + FG+ Sbjct: 419 D--------------KAVNPSNVMGASKRASEMYVQSLNYNLQLKDRCATKFITTRFGN 463 >gi|317494814|ref|ZP_07953225.1| dTDP-glucose 4,6-dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917139|gb|EFV38487.1| dTDP-glucose 4,6-dehydratase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 354 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ + F + PD +++ AA + VD++ D P N G I +AA Sbjct: 58 VDICNRTELDRVFAQYQPDYVMHLAAESHVDRSIDGPAAFIETNIVGTYTILEAARQYWN 117 Query: 92 --------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 118 GLDEQRKSAFRFHHISTDEVYGDLHGTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|253996733|ref|YP_003048797.1| dTDP-glucose 4,6-dehydratase [Methylotenera mobilis JLW8] gi|253983412|gb|ACT48270.1| dTDP-glucose 4,6-dehydratase [Methylotenera mobilis JLW8] Length = 361 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIG 92 A P ++N AA + VD++ PE N G + +A AD Sbjct: 68 AKLLAEHKPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFHLLEAVRAYWGELNTADKEN 127 Query: 93 IPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L + E +P P + Y SK + + V SY + Y Sbjct: 128 FRFLHVSTDEVYGSLGKNDPAFTETTPYAPNSPYSASKASSDHLVRSYHHTY 179 >gi|150020317|ref|YP_001305671.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] gi|149792838|gb|ABR30286.1| UDP-glucose 4-epimerase [Thermosipho melanesiensis BI429] Length = 326 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K F ++ D +++ AY V ++ P + N + + I Sbjct: 50 DISDKKLLEIVFSNYHIDAVMHFCAYIEVGESVVNPHKYYENNVSSTLVLLHSMLKHNIK 109 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 I+ ST ++ ++ PI E +P NP+N YGKSK EE + + Y Sbjct: 110 KFIFSSTAAIYGLPNKIPIKEDAPKNPINPYGKSKYMVEEILDDFDKAY 158 >gi|57238370|ref|YP_179498.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni RM1221] gi|88596043|ref|ZP_01099280.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|57167174|gb|AAW35953.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni RM1221] gi|88190884|gb|EAQ94856.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni 84-25] Length = 323 Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 73 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 133 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|284046756|ref|YP_003397096.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283950977|gb|ADB53721.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 309 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 18/170 (10%) Query: 1 MKCLVIGNNGQIAQSL------SSMCVQDVEIIRVGR----------PDIDLLKPKDFAS 44 M+ +V G G I +L + V V+ + GR ++D+L + Sbjct: 1 MRAIVTGGAGFIGSNLVDGLLAAGHAVAVVDDLSTGRRENLAADARLHELDVLDTAALNA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST--DY 102 F P+V+ + AA V ++ ++P +N EG + AA + G + S+ Sbjct: 61 AFAHERPEVVFHLAAQIDVRRSVEDPAQDLRVNVEGTVNVLNAARAAGARRVVFSSTGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 ++ P E +P PL YG SK A E + ++ + + A YS Sbjct: 121 IYGDADVLPTGEDAPLRPLAPYGASKHAAEGYLGVFSALHGLSTIALRYS 170 >gi|218508590|ref|ZP_03506468.1| UDP-glucose 4-epimerase protein [Rhizobium etli Brasil 5] Length = 185 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-S 108 P I++ AA V ++ +P + N G + AA + G+ + S+ GL Sbjct: 68 KPAAILHFAALIEVGQSVKDPVAFYDNNVVGTLTLLAAAQAAGVKSLVFSSTCATYGLPQ 127 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV--YSIFGSNF 158 R P+DE P+N YG++K E+ +A Y + Y+ R+ + ++ G++F Sbjct: 128 RVPLDETHRQVPINPYGRTKYIVEQALADY-DKYMGFRSVVLRYFNAAGADF 178 >gi|220927015|ref|YP_002502317.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219951622|gb|ACL62014.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 327 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 27/169 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDI-DLLKPK--------------DF- 42 M L++G G + + L + VQD ++ + R + D++ P+ DF Sbjct: 1 MHILILGAAGMVGRKLLARLVQDGQLGGTPISRLTLHDVVAPEAPAGLRAPVSLSASDFS 60 Query: 43 ----ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---IP- 94 A +S PDVI + AA + +AE + + + IN +G + A +IG P Sbjct: 61 LPGEAERLVSGRPDVIFHLAAIVS-GEAEADFDKGYRINLDGTRRLFDAVRAIGEGYCPR 119 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 ++ S+ VF I + T PL YG K GE ++ YT + Sbjct: 120 LVFTSSLAVFGAPMPEVIGDEYLTAPLTSYGTQKAIGELLLSDYTRRGI 168 >gi|281354881|ref|ZP_06241375.1| dTDP-glucose 4,6-dehydratase [Victivallis vadensis ATCC BAA-548] gi|281317761|gb|EFB01781.1| dTDP-glucose 4,6-dehydratase [Victivallis vadensis ATCC BAA-548] Length = 358 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--G 92 D+ + F F PD +++ AA + VD++ D P N G + +AA + G Sbjct: 61 DICDRAELDRIFSEFRPDAVMHLAAESHVDRSIDAPGDFIRTNIVGTYTLLEAARNYWSG 120 Query: 93 IPC--------IYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +ISTD VF L + E +P P + Y SK + + V ++ + Sbjct: 121 LPAGARERFRFHHISTDEVFGDLKDSDGFFREDTPYMPSSPYSASKASSDHLVRAWFRTF 180 >gi|110800926|ref|YP_694742.1| UDP-glucose 4-epimerase [Clostridium perfringens ATCC 13124] gi|110675573|gb|ABG84560.1| UDP-glucose 4-epimerase [Clostridium perfringens ATCC 13124] Length = 328 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI---------DLLKPKDFASF 45 M LV G G I + + +++ + + + G D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILSGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E P N YG+SKL E+ + Y I TA Y Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRY 167 >gi|23266710|gb|AAN16350.1|AF439323_1 UDP-glucose 4-epimerase Gal10 [Hypocrea jecorina] Length = 370 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 9/131 (6%) Query: 17 SSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEI 72 S + + +E++ RPD ID+ K F D +I+ AA AV ++ P Sbjct: 40 SKVAIDRIELLSGRRPDFYQIDITDEKALDEVFAKHPAIDSVIHFAALKAVGESSIIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ A+ ++ + I + S+ V+ +R PI E P P N YG++ Sbjct: 100 YYRVNVGGSIALLQSMTRHNVTNIVFSSSATVYGDATRFPNMIPIPEHCPIGPTNTYGRT 159 Query: 128 KLAGEEKVASY 138 K E+ + + Sbjct: 160 KSMIEDVITDH 170 >gi|332295144|ref|YP_004437067.1| UDP-glucose 4-epimerase [Thermodesulfobium narugense DSM 14796] gi|332178247|gb|AEE13936.1| UDP-glucose 4-epimerase [Thermodesulfobium narugense DSM 14796] Length = 322 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L FSPDVI + AA +V + P I IN G + + A + ++ ST G Sbjct: 63 LEFSPDVICHQAAQISVPYSVTHPYIDAKINILGTIRMLECASKLKAKFLFASTGGAIYG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVY 151 + +E + + + Y SKL E + + YVILR + VY Sbjct: 123 EIKDIANEDTEPSATSPYALSKLTSENYIKLMSQKFGFKYVILRYSNVY 171 >gi|325118712|emb|CBZ54263.1| UDP-glucose 4-epimerase, related [Neospora caninum Liverpool] Length = 364 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 46/108 (42%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ + F + D +I+ A AV ++ ++P +S N G + K D+ G Sbjct: 80 NVDMCDEEALQKLFKNRHFDAVIHYAGLKAVGESVEKPLEYYSTNVGGTIKLLKVMDAAG 139 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + S+ PI E PT N YG++K E+ + N Sbjct: 140 CRRLVFSSSATVYRPKAGPIVETDPTGASNPYGQTKAMIEQILKDLHN 187 >gi|301061524|ref|ZP_07202286.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] gi|300444332|gb|EFK08335.1| RmlD substrate binding domain protein [delta proteobacterium NaphS2] Length = 332 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 5/122 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-T 110 D +++ A ++ P++ ++N G + AA G+ + + G+ + Sbjct: 70 DCVLHLATLGHLNNFTVSPQMFEAVNVHGTINVMNAALDAGVKRVVHCSSVAAMGICKDN 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLLSMLRLA 166 P E S P + YGKSKL EE + ++ I+R + VY +L + R+A Sbjct: 130 PATEESRCIPHHPYGKSKLKAEEAILKMVSSRHLPACIIRFSMVYGPGDWRDMLKLTRMA 189 Query: 167 KE 168 K+ Sbjct: 190 KK 191 >gi|160889724|ref|ZP_02070727.1| hypothetical protein BACUNI_02154 [Bacteroides uniformis ATCC 8492] gi|156860716|gb|EDO54147.1| hypothetical protein BACUNI_02154 [Bacteroides uniformis ATCC 8492] Length = 358 Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R + D+ S PD I N AA + V + Sbjct: 39 NTGRIEHLYFDEWVRDMKQKRTINLHYGDMTDSSSLIRIIQSVQPDEIYNLAAQSHVKVS 98 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPC---IY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 99 FDVPEYTAETDAVGTLRMLEAVRILGMEKKTRIYQASTSELFGKVQEVPQSETTPFYPRS 158 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 159 PYGVAKQYGFWITKNYRESY 178 >gi|256423749|ref|YP_003124402.1| polysaccharide biosynthesis protein CapD [Chitinophaga pinensis DSM 2588] gi|256038657|gb|ACU62201.1| polysaccharide biosynthesis protein CapD [Chitinophaga pinensis DSM 2588] Length = 643 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 15/99 (15%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDY 102 F + P V+ + AAY V E P +A N G +A+ + G+ + ISTD Sbjct: 356 QLFEVYEPSVVYHAAAYKHVPMMEKNPSVAVLNNVLGTKMLAELSVEFGVEKFVMISTD- 414 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP N+ G SK E SY + Sbjct: 415 -------------KAVNPTNVMGASKRIAEIFTQSYNTH 440 >gi|167647945|ref|YP_001685608.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] gi|167350375|gb|ABZ73110.1| NAD-dependent epimerase/dehydratase [Caulobacter sp. K31] Length = 351 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 23/171 (13%) Query: 77 NAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPIDEFS--PTNPLNIYGKSKLAGE 132 NA G + +AA G+ I +ST+ V DG +DE PT P Y +SK+A Sbjct: 106 NATGTETVLRAARVAGVRRAIVLSTESVLADGRPLRNVDETRAYPTRPAGAYSRSKIA-A 164 Query: 133 EKVASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI 188 EK+A N+ +I+R +V+ L ML A E++ + D G TS + I Sbjct: 165 EKIALSLNDETFAVIIVRPRFVWG-RDDTTALPMLVEAARSGELAWI-DGGGYLTSTIHI 222 Query: 189 ARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAE 235 NL D +L+ G + +DG PV++ + E Sbjct: 223 --------DNLCHGVDLALKAGRGGEIYFLSDGEPVAFRTIVSALLETQGE 265 >gi|116750783|ref|YP_847470.1| GDP-mannose 4,6-dehydratase [Syntrophobacter fumaroxidans MPOB] gi|116699847|gb|ABK19035.1| GDP-mannose 4,6-dehydratase [Syntrophobacter fumaroxidans MPOB] Length = 388 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 13/130 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD I N AA + V + + PE + +A G + ++ +G+ Sbjct: 66 DLTDATNLLRIIQEVQPDEIYNLAAQSHVKVSFETPEYTANADAMGTLRLLESIRILGLE 125 Query: 95 C----IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 ST ++ + TP E +P P + Y +KL G +Y Sbjct: 126 ARTRFYQASTSELYGKVQETPQTERTPFYPRSPYAVAKLYGYWITVNYRE---------A 176 Query: 151 YSIFGSNFLL 160 Y IFG N +L Sbjct: 177 YGIFGCNGIL 186 >gi|47096069|ref|ZP_00233670.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 1/2a F6854] gi|254828052|ref|ZP_05232739.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N3-165] gi|254900385|ref|ZP_05260309.1| UDP-glucose 4-epimerase [Listeria monocytogenes J0161] gi|254913376|ref|ZP_05263388.1| UDP-glucose 4-epimerase [Listeria monocytogenes J2818] gi|254937757|ref|ZP_05269454.1| UDP-glucose 4-epimerase [Listeria monocytogenes F6900] gi|47015530|gb|EAL06462.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 1/2a F6854] gi|258600436|gb|EEW13761.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N3-165] gi|258610360|gb|EEW22968.1| UDP-glucose 4-epimerase [Listeria monocytogenes F6900] gi|293591382|gb|EFF99716.1| UDP-glucose 4-epimerase [Listeria monocytogenes J2818] Length = 327 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|297538152|ref|YP_003673921.1| DNA polymerase III subunits gamma and tau [Methylotenera sp. 301] gi|297257499|gb|ADI29344.1| DNA polymerase III, subunits gamma and tau [Methylotenera sp. 301] Length = 573 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 12 IAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 +AQ +SS +Q +I +GR DI L P +FA F +S + P+ P Sbjct: 315 LAQRISSETLQLYYQIALLGRRDISL-APDEFAGFTMSLLRMLAFTPSESDLKKTLNKTP 373 Query: 71 EIA----FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF-SPTN 119 +A S N AIA A ++ +P + + V TPI +PT+ Sbjct: 374 AVANANIVSTNTVNTSAIAAEAKTVTLPTVTAAEHQVVQNAEPTPIQPLNTPTS 427 >gi|168210399|ref|ZP_02636024.1| UDP-glucose 4-epimerase [Clostridium perfringens B str. ATCC 3626] gi|168216625|ref|ZP_02642250.1| UDP-glucose 4-epimerase [Clostridium perfringens NCTC 8239] gi|170711514|gb|EDT23696.1| UDP-glucose 4-epimerase [Clostridium perfringens B str. ATCC 3626] gi|182381377|gb|EDT78856.1| UDP-glucose 4-epimerase [Clostridium perfringens NCTC 8239] Length = 328 Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI---------DLLKPKDFASF 45 M LV G G I + + +++ + + + G D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E P N YG+SKL E+ + Y I TA Y Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRY 167 >gi|282859482|ref|ZP_06268587.1| dTDP-glucose 4,6-dehydratase [Prevotella bivia JCVIHMP010] gi|282587710|gb|EFB92910.1| dTDP-glucose 4,6-dehydratase [Prevotella bivia JCVIHMP010] Length = 384 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 16/124 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ + F D ++N AA + VD++ ++P++ S+N G + AA Sbjct: 63 DIRDAQLLDKLFAEHDIDYLVNFAAESHVDRSIEDPQLFLSVNILGTQCLMDAAKRAWVT 122 Query: 89 --DSIGIPCI-------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 D+ G P +STD V+ L + E +P P + Y SK + + V +Y Sbjct: 123 GKDAQGYPTWKAGKRYHQVSTDEVYGSLGAEGYFTEATPLCPHSPYSASKTSADHFVMAY 182 Query: 139 TNNY 142 + + Sbjct: 183 KDTF 186 >gi|163795074|ref|ZP_02189042.1| polysaccharide biosynthesis protein CapD [alpha proteobacterium BAL199] gi|159179472|gb|EDP64001.1| polysaccharide biosynthesis protein CapD [alpha proteobacterium BAL199] Length = 340 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D +++ AA V AE P N +GA + KAA G+ I +STD Sbjct: 90 DYVVHAAALKHVPTAEYNPFECVRTNIDGAENVVKAAIRTGVRKVIALSTD--------- 140 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP+N+YG +KLA +K+ NN Sbjct: 141 -----KAANPINLYGATKLA-SDKIFVAANN 165 >gi|301633548|gb|ADK87102.1| UDP-glucose 4-epimerase [Mycoplasma pneumoniae FH] Length = 338 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++LL +PDV+ + AA T+V ++ ++P F N G + A + Sbjct: 58 VNLLDRAQLTDTIAQINPDVVFHFAAKTSVKESTEQPLTYFDHNLVGTLNLLHALKELQK 117 Query: 94 P--CIYISTDYVFDGLSRTPIDE---FSPTNPLNIYGKSKLAGEEKVASYT 139 P + ST VF S PI E T N YG SK E + + T Sbjct: 118 PIQLFFSSTAAVFGSASTLPIPENLVLEETLASNPYGISKFLSEIVLQTLT 168 >gi|288560726|ref|YP_003424212.1| UDP-glucose 4-epimerase GalE [Methanobrevibacter ruminantium M1] gi|288543436|gb|ADC47320.1| UDP-glucose 4-epimerase GalE [Methanobrevibacter ruminantium M1] Length = 324 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 DL F + + +++ AA+++V ++ +EPE F N E + + + Sbjct: 49 DLSDSDKLREIFQNNDIEAVMHFAAFSSVAESVEEPEKYFKNNFENTANLLRIMKEFRVR 108 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 I+ ST ++ PI E + P+N YG+SKL E + ++ YV LR Sbjct: 109 KFIFSSTAALYGIPKEIPISESAELKPINPYGESKLMVENLLKDESDFGGLKYVSLR 165 >gi|209693795|ref|YP_002261723.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|209693854|ref|YP_002261782.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|208007746|emb|CAQ77865.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] gi|208007805|emb|CAQ77928.1| dTDP-D-glucose-4,6-dehydratase [Aliivibrio salmonicida LFI1238] Length = 363 Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 56/141 (39%), Gaps = 16/141 (11%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIA 73 +SLS + D R +D+ + F + PD +++ AA + VD++ D P Sbjct: 41 ESLSQVEASD----RYSFEHVDICNRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAF 96 Query: 74 FSINAEGAGAIAKAADSI----------GIPCIYISTDYVFDGLSRTP--IDEFSPTNPL 121 N G + +A + +ISTD V+ L T E +P P Sbjct: 97 IETNIVGTYTLLEATRAYWNLLADDKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPS 156 Query: 122 NIYGKSKLAGEEKVASYTNNY 142 + Y SK + + V ++ Y Sbjct: 157 SPYSASKASSDHLVRAWQRTY 177 >gi|315058800|gb|ADT73129.1| Legionaminic acid biosynthesis protein PtmX, NAD-dependent epimerase/dehydratase [Campylobacter jejuni subsp. jejuni S3] Length = 323 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 73 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 133 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 164 >gi|270291175|ref|ZP_06197398.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] gi|270280571|gb|EFA26406.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] Length = 330 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 17/148 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA++ V ++ ++P F N G A+ + + I+ ST + ++ Sbjct: 68 DTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMRDHDVKRIIFSSTAATYGVPEKS 127 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIF---------GSN 157 PI+E P+N YG+SKL E+ + +Y +V LR V + G Sbjct: 128 PIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFVALRYFNVAGAYPDGSIGEDHGPE 187 Query: 158 FLLSMLRL---AKERREISVVCDQFGTP 182 L+ + L A +R ++ + D + TP Sbjct: 188 THLTPIILQVAAGQRDQLKIFGDDYNTP 215 >gi|227536758|ref|ZP_03966807.1| UDP-N-acetylglucosamine 4-epimerase [Sphingobacterium spiritivorum ATCC 33300] gi|227243378|gb|EEI93393.1| UDP-N-acetylglucosamine 4-epimerase [Sphingobacterium spiritivorum ATCC 33300] Length = 320 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 31/67 (46%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 + + +N +G +A + GI I ++ GL + DE +P N YGKSK Sbjct: 80 LYYDVNVQGMKNTLQAMKTNGIKRIIFTSSVAIYGLDKDNPDESFSADPFNHYGKSKWQA 139 Query: 132 EEKVASY 138 EE + + Sbjct: 140 EEVLQEW 146 >gi|110802457|ref|YP_697603.1| UDP-glucose 4-epimerase [Clostridium perfringens SM101] gi|168212795|ref|ZP_02638420.1| UDP-glucose 4-epimerase [Clostridium perfringens CPE str. F4969] gi|182626820|ref|ZP_02954557.1| UDP-glucose 4-epimerase [Clostridium perfringens D str. JGS1721] gi|110682958|gb|ABG86328.1| UDP-glucose 4-epimerase [Clostridium perfringens SM101] gi|170715723|gb|EDT27905.1| UDP-glucose 4-epimerase [Clostridium perfringens CPE str. F4969] gi|177907829|gb|EDT70429.1| UDP-glucose 4-epimerase [Clostridium perfringens D str. JGS1721] Length = 328 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI---------DLLKPKDFASF 45 M LV G G I + + +++ + + + G D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E P N YG+SKL E+ + Y I TA Y Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRY 167 >gi|42784429|ref|NP_981676.1| NAD dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] gi|42740361|gb|AAS44284.1| NAD dependent epimerase/dehydratase family protein [Bacillus cereus ATCC 10987] Length = 341 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 F + P++++N AA V + + P++ N G I +A + +Y S+ Sbjct: 78 TKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACRHFPVEHLVYASSS 137 Query: 102 YVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 V+ + P +E NP+++Y +K + E +Y++ Y I LR VY G Sbjct: 138 SVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYKIPATGLRFFTVYGPLG 196 >gi|88858128|ref|ZP_01132770.1| probable UDP-glucose 4-epimerase [Pseudoalteromonas tunicata D2] gi|88819745|gb|EAR29558.1| probable UDP-glucose 4-epimerase [Pseudoalteromonas tunicata D2] Length = 329 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 +++ + AA A+ + P+ + N G I +AA + I+ ST V+ Sbjct: 78 EIVFHLAALIAIPYSYTAPDSYVATNVTGTLNICQAAKENKVARVIHTSTSEVYGTAQYV 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+ + S+ N + Sbjct: 138 PIDEKHPLQPQSPYSASKIGADMMAMSFYNAF 169 >gi|110637266|ref|YP_677473.1| dTDP-glucose 4,6 dehydratase [Cytophaga hutchinsonii ATCC 33406] gi|110279947|gb|ABG58133.1| dTDP-glucose 4,6 dehydratase [Cytophaga hutchinsonii ATCC 33406] Length = 301 Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 8/109 (7%) Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIP-CIY 97 DF F + DV IN + +V + P F +N + DSI IP C + Sbjct: 52 DFNEVFQQVAFDVCINCSGSASVPLSMINPGRDFHLNVLN---VFNMLDSIRKNIPSCKF 108 Query: 98 I--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 + S+ V+ PI E +P NPL+ YG KL E + N+ + Sbjct: 109 VNLSSAAVYGNPESLPIKEDTPINPLSPYGWHKLQSEILCKQFNQNFAL 157 >gi|237748607|ref|ZP_04579087.1| UDP-glucose 4-epimerase [Oxalobacter formigenes OXCC13] gi|229379969|gb|EEO30060.1| UDP-glucose 4-epimerase [Oxalobacter formigenes OXCC13] Length = 341 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 ++D+ + F S D II+ A AV ++ +P + + N G ++ + A+ G Sbjct: 61 EVDVRDKAGLKNVFQQHSIDAIIHFAGLKAVGESVAKPLMYYDNNVSGTLSLLEVANDAG 120 Query: 93 I-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + ++ S+ V+ +P+ E + + N YG+SKL EE Sbjct: 121 VRHFVFSSSATVYGDPDFSPVPETARLSVANPYGRSKLMIEE 162 >gi|157376125|ref|YP_001474725.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] gi|157318499|gb|ABV37597.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] Length = 352 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 14/122 (11%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F PD +++ AA + VD++ D P N G A+ +A + I Sbjct: 57 LDICDSVELKRVFEQHKPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYALLEATRAYWI 116 Query: 94 PC----------IYISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTN 140 +ISTD V+ L T +D F +P P + Y SK + + V ++ Sbjct: 117 ALDEDKKAAFRFHHISTDEVYGDLEGT-VDLFTETTPYEPSSPYSASKASSDHLVRAWQR 175 Query: 141 NY 142 Y Sbjct: 176 TY 177 >gi|71733301|ref|YP_273241.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71553854|gb|AAZ33065.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 366 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 12/110 (10%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIP 94 F P +++ AA + VD++ PE N G + +AA D Sbjct: 67 LFAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATDKTAFR 126 Query: 95 CIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 127 FLHVSTDEVYGTLGANDPAFTETTPYLPNSPYSASKAASDHLVRSYHHTY 176 >gi|316975622|gb|EFV59032.1| GDP-mannose 4,6-dehydratase [Trichinella spiralis] Length = 470 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 7/141 (4%) Query: 8 NNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 N G+I + +I+ G DL + S PD I N AA + V + Sbjct: 162 NTGRIIHLYDDPVLHQSKILHYG----DLSDSSGLTNLINSIKPDEIYNLAAQSHVKVSF 217 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIPCIYI---STDYVFDGLSRTPIDEFSPTNPLNIY 124 D PE INA G + A + + + S+ +F + P E +P P + Y Sbjct: 218 DVPEYTSDINAIGTLRLLCAIRACNLKNVRFYQASSSELFGKVQEIPQSETTPFYPRSPY 277 Query: 125 GKSKLAGEEKVASYTNNYVIL 145 SK V +Y Y I Sbjct: 278 AVSKQYAYWIVVNYREAYNIF 298 >gi|295400726|ref|ZP_06810703.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] gi|294977307|gb|EFG52908.1| NAD-dependent epimerase/dehydratase [Geobacillus thermoglucosidasius C56-YS93] Length = 144 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 4/39 (10%) Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 I E PTNP+N YG+SKL E+ +A +Y NYV+LR Sbjct: 88 ITEDCPTNPINPYGRSKLMIEQILADFASAYGLNYVVLR 126 >gi|284802915|ref|YP_003414780.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5578] gi|284996056|ref|YP_003417824.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5923] gi|284058477|gb|ADB69418.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5578] gi|284061523|gb|ADB72462.1| UDP-glucose 4-epimerase [Listeria monocytogenes 08-5923] Length = 327 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|229492624|ref|ZP_04386427.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis SK121] gi|229320610|gb|EEN86428.1| dTDP-glucose 4,6-dehydratase [Rhodococcus erythropolis SK121] Length = 334 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-- 109 D +++ AA + D + +PE N G ++ +A S G+ +ISTD V+ L Sbjct: 72 DAVVHFAAESHNDNSLADPEPFLRTNVMGTFSLLQAVRSHGVRYHHISTDEVYGDLELDD 131 Query: 110 -TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E +P NP + Y SK + + V ++ ++ I T Sbjct: 132 PAKFTETTPYNPSSPYSASKASSDLFVRAWVRSFGIAAT 170 >gi|168021237|ref|XP_001763148.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685631|gb|EDQ72025.1| predicted protein [Physcomitrella patens subsp. patens] Length = 392 Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 3/127 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIG 92 +DL K F + DV+++ AA V ++ EP +I + G + Sbjct: 107 VDLGDSKAVNEVFSKNAIDVVMHFAAVAYVGESTAEPLRYYHNITSNTLGLLEAMVRHRV 166 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWV 150 IY ST + PI E +P P+N YGK+K E+ + Y +N+ + + Sbjct: 167 HKFIYSSTCATYGEPDVMPIKESTPQVPINPYGKAKKMAEDIILDYVKSNDQLSVMILRY 226 Query: 151 YSIFGSN 157 +++ GS+ Sbjct: 227 FNVIGSD 233 >gi|325000712|ref|ZP_08121824.1| polysaccharide biosynthesis protein CapD [Pseudonocardia sp. P1] Length = 328 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 22/113 (19%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA VD AE P N EG+ + +AA G+ + +STD Sbjct: 80 DYVVHAAALKQVDTAEYNPFEFIRTNVEGSQNVVEAAIDAGVKKVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGE-------EKVASYTNNYVILRTAWVYSIFGS 156 ++P+N+YG +KL + A+Y + ++R V GS Sbjct: 131 -----KASSPINLYGATKLCADRLFVSANHYAAAYETRFAVVRYGNVLGSRGS 178 >gi|304385459|ref|ZP_07367804.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] gi|304328666|gb|EFL95887.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] Length = 335 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 17/148 (11%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ AA++ V ++ ++P F N G A+ + + I+ ST + ++ Sbjct: 73 DTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMRDHDVKRIIFSSTAATYGVPEKS 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIF---------GSN 157 PI+E P+N YG+SKL E+ + +Y +V LR V + G Sbjct: 133 PIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFVALRYFNVAGAYPDGSIGEDHGPE 192 Query: 158 FLLSMLRL---AKERREISVVCDQFGTP 182 L+ + L A +R ++ + D + TP Sbjct: 193 THLTPIILQVSAGQRDQLKIFGDDYNTP 220 >gi|298293161|ref|YP_003695100.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] gi|296929672|gb|ADH90481.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506] Length = 339 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDG 106 F PD+I++ AA V + ++P N G + + A ++ + + + ST V+ Sbjct: 77 EFRPDIIVHLAAQAGVRYSLEKPRAYIDSNIVGTFNVMECARAVPVQHLLMASTSSVYGA 136 Query: 107 LSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 P E + PL IY +K A E SY + Y + T + ++++G Sbjct: 137 NEEMPFHETDKADTPLTIYAATKKATEAMGHSYAHIYGLPTTMFRFFTVYG 187 >gi|229014762|ref|ZP_04171865.1| Nucleotide sugar epimerase [Bacillus mycoides DSM 2048] gi|228746528|gb|EEL96428.1| Nucleotide sugar epimerase [Bacillus mycoides DSM 2048] Length = 266 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 F + P++++N AA V + + P++ N G I +A + +Y S+ Sbjct: 3 TKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNVIGFYNILEACRHFPVDHLVYASSS 62 Query: 102 YVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 V+ + P +E NP+++Y +K + E +Y++ Y I LR VY G Sbjct: 63 SVYGANKKVPFEETDFVDNPVSLYASTKKSNELMAHTYSHLYKIPATGLRFFTVYGPMG 121 >gi|169344045|ref|ZP_02865033.1| UDP-glucose 4-epimerase [Clostridium perfringens C str. JGS1495] gi|169297780|gb|EDS79877.1| UDP-glucose 4-epimerase [Clostridium perfringens C str. JGS1495] Length = 328 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K F + + +I+ AAY+ V ++ EP F+ N G ++ +A + Sbjct: 50 DLRDRKILDKIFTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVK 109 Query: 95 CI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I + ST + PI E P N YG+SKL E+ + Y I TA Y Sbjct: 110 YIVFSSTAATYGEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRY 167 >gi|320527469|ref|ZP_08028650.1| UDP-glucose 4-epimerase [Solobacterium moorei F0204] gi|320132182|gb|EFW24731.1| UDP-glucose 4-epimerase [Solobacterium moorei F0204] Length = 337 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L K F D +I+ A Y AV ++ + P + N G+ + A +G Sbjct: 59 DVLDRKGLDRIFAENHIDAVIHFAGYKAVGESVEIPLTYYENNITGSLNLYMAMKKVGCK 118 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++ S+ V+ PI E P + N YG +KL E Sbjct: 119 TLVFSSSATVYGSPESCPIREDFPVSTTNPYGSTKLMNE 157 >gi|221200999|ref|ZP_03574039.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] gi|221206549|ref|ZP_03579562.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221173858|gb|EEE06292.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221178849|gb|EEE11256.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] Length = 371 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P +++ AA + VD++ P N G + +A Sbjct: 74 VDICDRAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWN 133 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 134 GLNDADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 193 Query: 142 Y 142 Y Sbjct: 194 Y 194 >gi|221214406|ref|ZP_03587377.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] gi|221165663|gb|EED98138.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] Length = 371 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P +++ AA + VD++ P N G + +A Sbjct: 74 VDICDRAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWN 133 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 134 GLNDADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 193 Query: 142 Y 142 Y Sbjct: 194 Y 194 >gi|16804515|ref|NP_466000.1| UDP-glucose 4-epimerase [Listeria monocytogenes EGD-e] gi|224503282|ref|ZP_03671589.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-561] gi|255026152|ref|ZP_05298138.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-003] gi|16411965|emb|CAD00555.1| UDP-glucose 4-epimerase [Listeria monocytogenes EGD-e] Length = 327 Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTP 215 >gi|255524616|ref|ZP_05391569.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] gi|255511640|gb|EET87927.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] Length = 356 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 10/109 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSI------GIP 94 F + D ++N AA + VD++ +PEI N G +AK A + G Sbjct: 69 KLFKQYDIDYVVNFAAESHVDRSIADPEIFIKTNVLGTSVLLNVAKKAWEVERRFKEGKK 128 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L T E + +P + Y SK + V +Y + Y Sbjct: 129 YLQVSTDEVYGSLEETGFFMETTALDPHSPYSSSKTGADLWVKAYYDTY 177 >gi|315498288|ref|YP_004087092.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] gi|315416300|gb|ADU12941.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB 48] Length = 337 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 3/109 (2%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYVFDGLS 108 P++II+ AA V + ++P + N G+ I + A + + + ST V+ Sbjct: 76 QPEIIIHLAAQAGVRYSLEQPRTYVNTNVIGSFNILEVARLLKPQHLLLASTSSVYGANE 135 Query: 109 RTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW-VYSIFG 155 + P +E T+ P+ +Y +K + E SY + + I TA+ ++++G Sbjct: 136 KVPFEEVDKTDEPMTLYAATKKSMEVMAHSYAHLWKIPTTAFRFFTVYG 184 >gi|170747482|ref|YP_001753742.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170654004|gb|ACB23059.1| NAD-dependent epimerase/dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 338 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-G 92 IDLL F F P I++ A +V + P + +N G + A +++ G Sbjct: 65 IDLLDEAALGGFVARFRPTAILHLAGLASVADSASGPGQTWRVNVNGLMNLVAAVEAVPG 124 Query: 93 IPCIYISTDYVFDG--LSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++S+ V+ L+ + E P N Y +SK GE+ Sbjct: 125 CTFFFVSSGEVYGSAFLAGHALSEAVEPLPRNTYARSKWVGEQ 167 >gi|157413803|ref|YP_001484669.1| nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] gi|157388378|gb|ABV51083.1| Nucleoside-diphosphate-sugar epimerase [Prochlorococcus marinus str. MIT 9215] Length = 341 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 FF + P +IN AA V + + P N G I + + +Y S+ V Sbjct: 76 FFKKYKPSRVINLAAQAGVRYSIENPSAYIQSNIVGFCNILELCRHTEVKHLVYASSSSV 135 Query: 104 FDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 + G ++ P +E S +P+++Y SK + E +Y++ Y + LR VY +G Sbjct: 136 YGGNTKMPFSEEQSVAHPVSLYAASKKSNELMAHTYSHLYNLPATGLRFFTVYGPWG 192 >gi|224025633|ref|ZP_03643999.1| hypothetical protein BACCOPRO_02373 [Bacteroides coprophilus DSM 18228] gi|224018869|gb|EEF76867.1| hypothetical protein BACCOPRO_02373 [Bacteroides coprophilus DSM 18228] Length = 397 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 16/115 (13%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPC 95 F + D I+N AA + VD++ D P++ N G + AA D G P Sbjct: 87 QLFADYKFDYIVNFAAESHVDRSIDNPQLFLQTNILGTQNLLDAARRAWVTGKDEFGYPT 146 Query: 96 I-------YISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L E +P P + Y SK + + V +Y + Y Sbjct: 147 WRKDVRFHQVSTDEVYGSLGPEGYFTEETPLCPHSPYSASKTSADLIVTAYRDTY 201 >gi|16803123|ref|NP_464608.1| hypothetical protein lmo1083 [Listeria monocytogenes EGD-e] gi|224502603|ref|ZP_03670910.1| hypothetical protein LmonFR_08789 [Listeria monocytogenes FSL R2-561] gi|254830147|ref|ZP_05234802.1| hypothetical protein Lmon1_02260 [Listeria monocytogenes 10403S] gi|16410485|emb|CAC99161.1| lmo1083 [Listeria monocytogenes EGD-e] Length = 328 Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|332716103|ref|YP_004443569.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] gi|325062788|gb|ADY66478.1| UDP-glucose 4-epimerase [Agrobacterium sp. H13-3] Length = 327 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 5/117 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + FSP +I+ AA V ++ ++P + N G+ A+ A I Sbjct: 52 DILDRSLLKATLKEFSPAFVIHCAANAYVGESVEDPRKYYRNNVGGSLALLDACLDQNIG 111 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKL----AGEEKVASYTNNYVILR 146 + S+ G+ + PI E + P+N YG++KL A ++ A+Y +V LR Sbjct: 112 GLVFSSSCATYGVPPQLPIREETAQIPVNPYGRTKLIFEMALDDYAAAYGMRFVALR 168 >gi|118475135|ref|YP_892498.1| putative epimerase/dehydratase WbiI [Campylobacter fetus subsp. fetus 82-40] gi|118414361|gb|ABK82781.1| putative epimerase/dehydratase WbiI [Campylobacter fetus subsp. fetus 82-40] Length = 595 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 15/100 (15%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 ++++ K+F F F PD++I+ AAY V E P A N G + + G Sbjct: 329 LNIMHLKEFEEIFAKFKPDIVIHAAAYKHVPLCEFNPISAVQNNILGTKNVVDLSKKYGT 388 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 + ISTD P NI G +K E Sbjct: 389 KRVVLISTD--------------KAVRPTNIMGTTKRVCE 414 >gi|134300834|ref|YP_001114330.1| UDP-glucose 4-epimerase [Desulfotomaculum reducens MI-1] gi|134053534|gb|ABO51505.1| UDP-galactose 4-epimerase [Desulfotomaculum reducens MI-1] Length = 337 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 1/101 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L+ + A FL + +I+ A AV ++ P + N G + + G+ Sbjct: 57 VDVLEQAELAKVFLENQIEAVIHFAGLKAVGESVAIPLRYYHNNITGTLILCETMQKHGV 116 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ S+ V+ PI E P + N YG++KL EE Sbjct: 117 KKLVFSSSATVYGDPKSVPISEDFPLSATNPYGRTKLMIEE 157 >gi|57168235|ref|ZP_00367374.1| probable nucleotide sugar dehydratase Cj1319 [Campylobacter coli RM2228] gi|57020609|gb|EAL57278.1| probable nucleotide sugar dehydratase Cj1319 [Campylobacter coli RM2228] Length = 330 Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 80 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 139 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 140 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 171 >gi|320528474|ref|ZP_08029631.1| NAD-binding domain 4 [Solobacterium moorei F0204] gi|320131060|gb|EFW23633.1| NAD-binding domain 4 [Solobacterium moorei F0204] Length = 275 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+ N A + + ++ ++ + +N + IA+ A + G+ + +ST V+ G + Sbjct: 49 DVVYNVAGIAHIKETDENRQLYYVVNRDLVVKIAECAKAAGVKQFVMLSTMSVY-GKTIG 107 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE---KVASYTNNYVILRTAWVY 151 I + + +P N YGKSKL + K+A ILR +Y Sbjct: 108 HITKQTKEDPQNAYGKSKLEADHLISKLADENFKVAILRPPMIY 151 >gi|260752346|ref|YP_003225239.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551709|gb|ACV74655.1| NAD-dependent epimerase/dehydratase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 313 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 4/132 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ L+ G G + + ++ + + + D+ ++F PDV ++ A Sbjct: 9 LRVLITGQKGFVGKHYLNLLRSNCNNVTIFEDKFDVTNYDLVEKNIVNFQPDVCVHLAGV 68 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDG--LSRTPIDEFS 116 T+ A P A+++N G I A C I+ ST V+ S +DE + Sbjct: 69 TSNQAARSAPNHAWNVNLNGTLNIGHAILKCVPECRLIFSSTSEVWGHSFCSEATVDEKT 128 Query: 117 PTNPLNIYGKSK 128 P+N Y SK Sbjct: 129 LLAPVNTYSASK 140 >gi|222148465|ref|YP_002549422.1| dTDP-glucose 4,6-dehydratase [Agrobacterium vitis S4] gi|221735453|gb|ACM36416.1| dTDP-glucose 4,6-dehydratase [Agrobacterium vitis S4] Length = 352 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + AS F SF PD +++ AA + VD++ + N G + + A + Sbjct: 58 DICDGQAIASAFASFKPDRVMHLAAESHVDRSITGAKDFVETNVLGTFTMLECARAYWQG 117 Query: 92 -------GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +++STD V+ L + E +P +P + Y SK A + ++ Y Sbjct: 118 LEGASKDGFRFLHVSTDEVYGSLGDEGLFTETTPYDPSSPYSASKAASDHLAKAWARTY 176 >gi|222148115|ref|YP_002549072.1| dTDP-D-glucose-46-dehydratase [Agrobacterium vitis S4] gi|221735103|gb|ACM36066.1| dTDP-D-glucose-46-dehydratase [Agrobacterium vitis S4] Length = 352 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ + AS F SF PD +++ AA + VD++ + N G + + A + Sbjct: 58 DICDGQAIASAFASFKPDRVMHLAAESHVDRSITGAKDFVETNVLGTFTMLECARAYWQG 117 Query: 92 -------GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G +++STD V+ L + E +P +P + Y SK A + ++ Y Sbjct: 118 LEGASKDGFRFLHVSTDEVYGSLGDEGLFTETTPYDPSSPYSASKAASDHLAKAWARTY 176 >gi|162451964|ref|YP_001614331.1| hypothetical protein sce3691 [Sorangium cellulosum 'So ce 56'] gi|161162546|emb|CAN93851.1| galE2 [Sorangium cellulosum 'So ce 56'] Length = 323 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 12/67 (17%) Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--------NFLLSMLRLAKERR- 170 P+++YG SKLAGE +++Y + + TAW+Y FG+ L L+ ++RR Sbjct: 142 PISLYGASKLAGEALISAYVECFGL--TAWIYR-FGNVVGPRGTHGAALDFLKKLRDRRT 198 Query: 171 EISVVCD 177 E+ V+ D Sbjct: 199 ELEVLGD 205 >gi|75763472|ref|ZP_00743192.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489040|gb|EAO52536.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 151 Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 11/143 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDL----LKPKDFASFFLSF-SPD 52 MK VIG +G I + ++ + +V I +P ID+ + D A+ + D Sbjct: 1 MKIGVIGGSGFIGKHVTKELLARGYEVVIFDKFKPSIDVPFKEIDILDIATLRENLIDVD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF-DGLSRT 110 +I+ AA VD E +N EG I + + GI ++ S+ V+ DG+S Sbjct: 61 GVIHLAALVGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS-V 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 P E P + YGK+KL E+ Sbjct: 120 PFKENDIKIPKSAYGKAKLMSED 142 >gi|332286442|ref|YP_004418353.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] gi|330430395|gb|AEC21729.1| dTDP-glucose 4,6-dehydratase [Pusillimonas sp. T7-7] Length = 357 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 12/111 (10%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI----------AKAADSIGI 93 S + P IIN AA + VD++ PE N G + + A+ Sbjct: 67 SLLVQHQPRAIINFAAESHVDRSIHGPEEFIQTNIVGTFHLLESTRAYWCKLQGAEKDNF 126 Query: 94 PCIYISTDYVFDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L + T E P + Y SK A + V SY + Y Sbjct: 127 RFLHVSTDEVYGSLGKDDTAFSETHRYQPNSPYSASKAASDHLVRSYHHTY 177 >gi|323693917|ref|ZP_08108104.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14673] gi|323502014|gb|EGB17889.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14673] Length = 340 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K F + PDV++N AA + VD++ +PE N G + A GI Sbjct: 59 DIADRKFIFELFENEKPDVVVNFAAESHVDRSITDPEAFVRTNVIGTTTLLDACREYGIQ 118 Query: 95 CIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 119 RYHQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|219559871|ref|ZP_03538947.1| hypothetical protein MtubT1_22117 [Mycobacterium tuberculosis T17] gi|260198833|ref|ZP_05766324.1| hypothetical protein MtubT4_01492 [Mycobacterium tuberculosis T46] gi|289441221|ref|ZP_06430965.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289572033|ref|ZP_06452260.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T17] gi|289414140|gb|EFD11380.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T46] gi|289545787|gb|EFD49435.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T17] Length = 326 Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 72 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 131 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y I+R ++IFG Sbjct: 132 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFG 179 >gi|289434340|ref|YP_003464212.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170584|emb|CBH27124.1| dTDP-glucose 4,6-dehydratase [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 328 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K + L D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----NIVLEHKIDAIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L E +P P + Y SK + + V SY Y Sbjct: 117 VTKYLQVSTDEVYGSLGEIGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|254823647|ref|ZP_05228648.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL J1-194] gi|254853033|ref|ZP_05242381.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL R2-503] gi|258606381|gb|EEW18989.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL R2-503] gi|293592870|gb|EFG00631.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL J1-194] Length = 328 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|111022410|ref|YP_705382.1| GDP-mannose 4,6-dehydratase [Rhodococcus jostii RHA1] gi|110821940|gb|ABG97224.1| GDP-mannose 4,6-dehydratase [Rhodococcus jostii RHA1] Length = 376 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 16/130 (12%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD + N AA + V + DEPE + G+ + +A G+ Sbjct: 97 DLSDGARLVTLLSQIQPDEVYNLAAQSHVRVSFDEPEHTGNTTGIGSVRLLEAVRLAGLN 156 Query: 95 CIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY--TNNYVILRTAWV 150 C Y S+ +F G + P +E +P P + YG + KV SY T NY R A Sbjct: 157 CRYYQASSSEMF-GATPPPQNEDTPFYPRSPYGAA------KVYSYWVTRNY---REA-- 204 Query: 151 YSIFGSNFLL 160 Y +F N +L Sbjct: 205 YGMFAVNGIL 214 >gi|91789853|ref|YP_550805.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666] gi|91699078|gb|ABE45907.1| NAD-dependent epimerase/dehydratase [Polaromonas sp. JS666] Length = 290 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 9/144 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NG + +++ Q E++ + DL + + S P +++ AA Sbjct: 1 MRILLTGANGFTGRHFTALAQQKGHEVVALAA---DLTDAEALKAEVASIQPSHVVHLAA 57 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYISTDYVFDGLSRTPIDEFS 116 + V A+ + +N G + A ++ I I S+ V+ + +PI E Sbjct: 58 ISFVGHAD--VRAFYDVNLFGTLNLLNAIAALEISPRSVILTSSANVYGNCAASPIPEDQ 115 Query: 117 PTNPLNIYGKSKLAGEEKVASYTN 140 PLN YG SKLA E +Y++ Sbjct: 116 IPAPLNHYGISKLAMEHLARTYSD 139 >gi|16329511|ref|NP_440239.1| UDP-glucose-4-epimerase [Synechocystis sp. PCC 6803] gi|1651993|dbj|BAA16919.1| UDP-glucose-4-epimerase [Synechocystis sp. PCC 6803] Length = 340 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILR 146 I+ ST V+ S PI E P+N YG+SKLA E + Y + YVILR Sbjct: 118 IFSSTAAVYGNSSSNPISEAEIPCPINPYGRSKLASEWIIQDYAKSSALQYVILR 172 >gi|326794043|ref|YP_004311863.1| UDP-glucose 4-epimerase [Marinomonas mediterranea MMB-1] gi|326544807|gb|ADZ90027.1| UDP-glucose 4-epimerase [Marinomonas mediterranea MMB-1] Length = 320 Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSR 109 D + AA +V+K+ + ++N G I + + + +P +Y S+ V+ + Sbjct: 67 DGCFHLAAVASVEKSNQQWAETHTVNQTGTVNILECSARLDCKVPVVYASSAAVYGDNAS 126 Query: 110 TPIDEFSPTNPLNIYGKSKLAGE 132 TP+ E S PL+ YG KL+ E Sbjct: 127 TPLTEHSEQRPLSAYGVDKLSCE 149 >gi|223040592|ref|ZP_03610863.1| GDP-mannose 4,6-dehydratase [Campylobacter rectus RM3267] gi|222878140|gb|EEF13250.1| GDP-mannose 4,6-dehydratase [Campylobacter rectus RM3267] Length = 343 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 17/133 (12%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI-----AKA 87 ++DL P + S PD I N AA + V + EP + NA G G + + Sbjct: 58 EMDLTDPFNILSVVSEVRPDEIYNLAAQSFVGVSFKEP--FHTANATGIGVLNLLEAVRI 115 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 D I ST +F + P E +P P + YG +KL G +Y + Sbjct: 116 VDK-NIKFYQASTSEMFGKVQAIPQSEDTPFYPRSPYGVAKLYGHFITVNYRES------ 168 Query: 148 AWVYSIFGSNFLL 160 Y IFGS+ +L Sbjct: 169 ---YEIFGSSGIL 178 >gi|163954984|ref|YP_001648088.1| hypothetical protein OsV5_011f [Ostreococcus virus OsV5] gi|163638433|gb|ABY27792.1| hypothetical protein OsV5_011f [Ostreococcus virus OsV5] Length = 325 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEG----AGAIAKAADSIGIPCIYISTDYVFDGLSR 109 I N AA + V + P F N G ++ ++AD S+ +F + Sbjct: 72 IYNLAAQSRVHTSFACPNYTFETNTTGILNILESVRQSADHTKYRVYQASSSEMFGKVRE 131 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +P +E +P P ++YG SK+A V +Y +Y Sbjct: 132 SPQNEETPFYPRSVYGVSKVAAHWLVKNYRESY 164 >gi|158335346|ref|YP_001516518.1| NAD dependent epimerase/dehydratase [Acaryochloris marina MBIC11017] gi|158305587|gb|ABW27204.1| NAD dependent epimerase/dehydratase, putative [Acaryochloris marina MBIC11017] Length = 305 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Query: 31 RPD----IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 RPD DL +P FA+ L D+ I+ AA V D+P + N G A Sbjct: 40 RPDADVSFDLNQPDQFAAQTLEQPVDLFIHAAAAHEV-TCRDQPYQSIFQNVAGTRAALD 98 Query: 87 AADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 + I +Y+ST +VF G IDE + P N YG S L E+ + Y Sbjct: 99 FCVANHISRFVYLSTFHVF-GHPTGHIDESTTPLPANDYGLSHLQSEDYLRLY 150 >gi|282878570|ref|ZP_06287351.1| NAD dependent epimerase/dehydratase family protein [Prevotella buccalis ATCC 35310] gi|281299361|gb|EFA91749.1| NAD dependent epimerase/dehydratase family protein [Prevotella buccalis ATCC 35310] Length = 641 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 40/162 (24%) Query: 2 KCLVIGNNGQIAQSLSSMC-----VQDVEIIRVGRP--DIDLLKPKDFAS---------- 44 K L+ G+ G I + Q + I + P D+ LL K+F + Sbjct: 301 KILITGSAGSIGSEMVKQIGKFNPAQMILIDQAETPQHDVRLLMEKEFPTVSTETIVASI 360 Query: 45 --------FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PC 95 F ++ PD + + AAY V ED P + N G IA + G+ Sbjct: 361 ENYERMEKLFATYQPDYVFHAAAYKHVPMMEDNPSESIQNNIWGTKIIADLSVKYGVKKF 420 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 + ISTD NP N+ G SK E V S Sbjct: 421 VMISTD--------------KAVNPTNVMGCSKRICEIYVQS 448 >gi|227873731|ref|ZP_03991961.1| galactosyltransferase [Oribacterium sinus F0268] gi|227840411|gb|EEJ50811.1| galactosyltransferase [Oribacterium sinus F0268] Length = 647 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 11/119 (9%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE---EKVASYTNNYVILRTAWVYS 152 I++S+ V+ G+ + I +P N YG SKL + +++ S N VILR +Y Sbjct: 453 IFMSSMIVYSGIEQDCITLKTPMKAQNYYGDSKLQADLTLQEMQSDQFNVVILRPPMIYG 512 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 M++LAK VV G S L I + + +IEN + RGIF Sbjct: 513 EGCKGNYPKMVKLAKMLPFFPVV----GNRRSMLYIGN-LAEFIRLMIENKE---RGIF 563 >gi|300765930|ref|ZP_07075903.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N1-017] gi|300513392|gb|EFK40466.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N1-017] Length = 328 Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|317496878|ref|ZP_07955208.1| UDP-glucose 4-epimerase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895890|gb|EFV18042.1| UDP-glucose 4-epimerase [Lachnospiraceae bacterium 5_1_63FAA] Length = 336 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 37 LKPKDFASFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 L+ KDF L D+ +I+ AA + V ++ +P + N G + ++ GI Sbjct: 52 LRDKDFVDSVLDQEKDIDAVIHFAANSLVGESMVDPLKYYDNNLCGTKTMVQSLVEHGID 111 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 ++ ST + + PI E T P N YG++KL+ E+ Sbjct: 112 KIVFSSTAATYGEPEKVPIVETDRTEPTNTYGETKLSMEK 151 >gi|224369399|ref|YP_002603563.1| RfbB [Desulfobacterium autotrophicum HRM2] gi|223692116|gb|ACN15399.1| RfbB [Desulfobacterium autotrophicum HRM2] Length = 350 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 15/131 (11%) Query: 24 VEIIRVGRPD------IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSIN 77 +E + V PD +D+ + F ++ D + + AA + VD++ PE+ N Sbjct: 46 LEDVAVKYPDRYIFEKLDICDAQGIQQVFERYAVDTVCHFAAESHVDRSIASPEVFVDTN 105 Query: 78 AEGAGAIAKAAD-SIGIPCI-YISTDYVFDGLSRT----PIDEFSPTNPLNIYGKSKLAG 131 +G + +A+ G ++STD V+ L ++ ++P++P Y SK A Sbjct: 106 IKGTFTLLEASRVQQGFSRFHHVSTDEVYGSLGKSGYFVETTSYAPSSP---YSASKAAS 162 Query: 132 EEKVASYTNNY 142 + V +Y + Y Sbjct: 163 DHLVRAYCHTY 173 >gi|203284353|ref|YP_002222093.1| nucleotide sugar epimerase [Borrelia duttonii Ly] gi|201083796|gb|ACH93387.1| nucleotide sugar epimerase [Borrelia duttonii Ly] Length = 352 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 10/132 (7%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---- 88 ++D+L + S F ++ I + AA + + + P+ +IN G I A Sbjct: 74 NLDILNKEQVLSLFNNYKFTHICHLAAQAGIRDSIENPDSYIAINIVGFFNILDACRIYK 133 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI--- 144 DSI +Y ST V+ + P E S T+ PLN+Y SK + E +Y++++ I Sbjct: 134 DSIE-HFVYASTSAVYGLNEKMPSSEDSITDHPLNLYAASKKSNEVIAHAYSSSFNIPTT 192 Query: 145 -LRTAWVYSIFG 155 LR VY +G Sbjct: 193 GLRFFTVYGPYG 204 >gi|254828461|ref|ZP_05233148.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N3-165] gi|258600857|gb|EEW14182.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes FSL N3-165] Length = 328 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|160900979|ref|YP_001566561.1| UDP-glucose 4-epimerase [Delftia acidovorans SPH-1] gi|160366563|gb|ABX38176.1| UDP-glucose 4-epimerase [Delftia acidovorans SPH-1] Length = 336 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F S +I+ AA AV ++ +P + N G A+ +A G+ ++ S+ V Sbjct: 67 LFAEHSIREVIHFAALKAVGESVAQPLRYYEHNVGGTVALLQAMRMAGVRSLVFSSSATV 126 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + + PI E P + N YG+SKL EE +A Sbjct: 127 YGDPASLPIREDFPLSATNPYGRSKLWIEEMLA 159 >gi|332286419|ref|YP_004418330.1| NAD-dependent epimerase/dehydratase [Pusillimonas sp. T7-7] gi|330430372|gb|AEC21706.1| NAD-dependent epimerase/dehydratase [Pusillimonas sp. T7-7] Length = 296 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGI 93 +LL A PD IIN AA V A + + +N GA + +AA ++ Sbjct: 44 NLLDADALAYVMADAQPDFIINLAAIAFV--AHGDANAFYQVNVIGARNLLQAALNAKKQ 101 Query: 94 P--CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 P + +S+ V+ + + IDE P P+N Y SKLA E + Y + Sbjct: 102 PRSILMVSSANVYGNATVSVIDENIPMAPVNDYAVSKLAMEYMTSLYID 150 >gi|322378634|ref|ZP_08053070.1| GDP-D-mannose dehydratase (RfbD) [Helicobacter suis HS1] gi|321148941|gb|EFX43405.1| GDP-D-mannose dehydratase (RfbD) [Helicobacter suis HS1] Length = 367 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 3/111 (2%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + S P I N AA + V + + PE +++A G I +A +G+ Sbjct: 64 DLTDSSNITSLLAKIRPTEIYNLAAQSHVQVSFEMPEYTANVDALGTLRILEAMRLLGLK 123 Query: 95 CIYI---STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ST ++ + TP +E +P NP + Y +KL +Y Y Sbjct: 124 DTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKLYAYYITKNYREAY 174 >gi|320102993|ref|YP_004178584.1| dTDP-glucose 4,6-dehydratase [Isosphaera pallida ATCC 43644] gi|319750275|gb|ADV62035.1| dTDP-glucose 4,6-dehydratase [Isosphaera pallida ATCC 43644] Length = 381 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----- 88 +DL + + F PD +++ AA + VD++ D P N G + AA Sbjct: 57 VDLNDREAVRTVFRDHDPDGVLHLAAESHVDRSIDGPGAFIQTNIGGTFHLLTAALEHWQ 116 Query: 89 -----DSIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T DE +P P + Y SK A + V ++ + Y Sbjct: 117 GLSESRQHRFRFLHVSTDEVYGSLGPTGYFDETTPYAPNSPYSASKAASDFLVRAWHHTY 176 >gi|290968979|ref|ZP_06560514.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] gi|290780935|gb|EFD93528.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] Length = 309 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 I+ S+ V+ +R P+ E T PL+ YG +K E + Y + YVILR A VY Sbjct: 113 IFSSSAAVYGDNTRVPLKETEATTPLSFYGLTKCTAEAYIRMYHDIFQVPYVILRYANVY 172 Query: 152 S 152 Sbjct: 173 G 173 >gi|289748306|ref|ZP_06507684.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T92] gi|289688893|gb|EFD56322.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T92] Length = 328 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 74 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 133 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y I+R ++IFG Sbjct: 134 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFG 181 >gi|258405693|ref|YP_003198435.1| UDP-glucose 4-epimerase [Desulfohalobium retbaense DSM 5692] gi|257797920|gb|ACV68857.1| UDP-glucose 4-epimerase [Desulfohalobium retbaense DSM 5692] Length = 328 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 +I+ AA+ V ++ +P +S N + + A + IP ++ ST V+ +P+ Sbjct: 71 VIHFAAHIVVPESVQQPLKYYSNNTSNTTNLIRLAAAHSIPHFVFSSTAAVYGLPESSPV 130 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E + +P+N YG+SKL E Sbjct: 131 SEQTQLDPINPYGRSKLMSE 150 >gi|218665304|ref|YP_002426373.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517517|gb|ACK78103.1| NAD-dependent epimerase/dehydratase family protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 333 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + F D ++N AA V + P N G + + + G+ Sbjct: 62 LDLADREGMQTLFAGPHFDAVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLEGCRAQGV 121 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 ++ S+ V+ +R P P + P+++Y +K AGE SY + Y I LR Sbjct: 122 DHLLFASSSSVYGANNRLPYSVHDPVDHPVSLYAATKRAGELMAHSYAHLYGIPSTGLRF 181 Query: 148 AWVYSIFG 155 VY +G Sbjct: 182 FTVYGPWG 189 >gi|215425035|ref|ZP_03422954.1| hypothetical protein MtubT9_01028 [Mycobacterium tuberculosis T92] Length = 286 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 32 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 91 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y + + ++IFG Sbjct: 92 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRPFNIFG 139 >gi|171680175|ref|XP_001905033.1| hypothetical protein [Podospora anserina S mat+] gi|170939714|emb|CAP64940.1| unnamed protein product [Podospora anserina S mat+] Length = 410 Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 15/136 (11%) Query: 15 SLSSMCVQDVEIIRVGRPDIDLLK--------PKDFASFFLSFSPDVIINPAAYTAVDKA 66 + +S+ V D+ R RP+ D +K S F PDV+I+ A+ A Sbjct: 70 TTTSISVIDLRCTRNRRPESDGVKYYEADITDADKLISVFSEARPDVVIHTASPPAQSND 129 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI--DEFSPT----N 119 + +N +G A+ KA + G+ +Y S+ V I DE PT N Sbjct: 130 SVSHALFKKVNVDGTAAVIKACQTTGVKALVYTSSASVMSDNKSDLINADERWPTVRGEN 189 Query: 120 PLNIYGKSKLAGEEKV 135 Y ++K A EE V Sbjct: 190 QTEYYSETKAAAEELV 205 >gi|292656187|ref|YP_003536084.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] gi|291371297|gb|ADE03524.1| UDP-glucose 4-epimerase [Haloferax volcanii DS2] Length = 310 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVI+N AA + VD++ E S N +G + AA I + ISTD V+ + Sbjct: 73 DVIVNFAAESHVDRSIGGAEPFVSTNVQGTQTLLDAALDADIDRFLQISTDEVYGEIHDG 132 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 E P P N Y +K + V SY + +I RT Sbjct: 133 KFTEDDPLAPRNPYSATKAGADLLVRSYRETHDLPTLITRT 173 >gi|219852771|ref|YP_002467203.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] gi|219547030|gb|ACL17480.1| NAD-dependent epimerase/dehydratase [Methanosphaerula palustris E1-9c] Length = 320 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 2/113 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 +LL + + PD I N AA ++V + D+P N + +A + Sbjct: 58 NLLDLVNIVGLLKRYKPDEIYNLAAQSSVKASFDQPIATIEFNIISVINLLEAIRLVDQK 117 Query: 95 CIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 Y S+ +F + PI E +P +PL+ Y SK A +Y +Y I Sbjct: 118 IKYYQASSSEMFGKVDDLPITENTPMHPLSPYAISKAAAHWIAINYRESYGIF 170 >gi|183600264|ref|ZP_02961757.1| hypothetical protein PROSTU_03818 [Providencia stuartii ATCC 25827] gi|188020054|gb|EDU58094.1| hypothetical protein PROSTU_03818 [Providencia stuartii ATCC 25827] Length = 355 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 19/154 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + CL N +SLS + D R +++ + F + PD +++ AA Sbjct: 32 VDCLTYAGN---LESLSEVSNSD----RYAFEQVNICHRAELDRVFAKYQPDAVMHLAAE 84 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADS--IGIPCI--------YISTDYVFDGLSRT 110 + VD++ D P N G + +AA +G+ +ISTD V+ L Sbjct: 85 SHVDRSIDGPAAFIETNIVGTYTLLEAARHYWMGLDAAKKAQFRFHHISTDEVYGDLEGP 144 Query: 111 P--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E +P P + Y SK + + V ++ Y Sbjct: 145 DGFFTETTPYAPSSPYSASKASSDHLVRAWQRTY 178 >gi|182435277|ref|YP_001822996.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463793|dbj|BAG18313.1| putative UDP-glucose 4-epimerase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 336 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +++ AA V ++ + P + N EG + +AA G+ S+ G+ + Sbjct: 70 VVHLAAKKQVAESVERPLHYYRENVEGLRVLLEAAADSGVGSFLFSSSAAVYGMPDVALV 129 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS 137 E +P P+N YG++KLAGE V S Sbjct: 130 TEDTPCAPINPYGETKLAGEWLVRS 154 >gi|39997073|ref|NP_953024.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|39983963|gb|AAR35351.1| NAD-dependent epimerase/dehydratase family protein [Geobacter sulfurreducens PCA] gi|298506087|gb|ADI84810.1| NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase [Geobacter sulfurreducens KN400] Length = 336 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 DV+++ AA A+ + P+ N +G + +AA +G+ ++ ST V+ Sbjct: 79 DVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGVAKVVHTSTSEVYGTARFV 138 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E P + Y SK+ ++ S+ +++ Sbjct: 139 PITEEHPLQGQSPYSASKIGADQIAMSFYSSF 170 >gi|296187052|ref|ZP_06855452.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] gi|296048490|gb|EFG87924.1| dTDP-glucose 4,6-dehydratase [Clostridium carboxidivorans P7] Length = 337 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 10/109 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSI------GIP 94 F + D ++N AA + VD++ +PEI N G +AK A + G Sbjct: 69 KLFKQYDIDYVVNFAAESHVDRSIADPEIFIKTNVLGTSVLLNVAKKAWEVERRFKEGKK 128 Query: 95 CIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + +STD V+ L T E + +P + Y SK + V +Y + Y Sbjct: 129 YLQVSTDEVYGSLEETGFFMETTALDPHSPYSSSKTGADLWVKAYYDTY 177 >gi|288927151|ref|ZP_06421035.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae D17] gi|288336088|gb|EFC74485.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae D17] Length = 343 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 16/114 (14%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPCI 96 F D ++N AA + VD++ ++P++ S+N G + AA D+ G P Sbjct: 29 LFAGHDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGKDAQGYPTW 88 Query: 97 -------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P P + Y SK + + V +Y + Y Sbjct: 89 KAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADLFVMAYRDTY 142 >gi|220913655|ref|YP_002488964.1| UDP-glucose 4-epimerase [Arthrobacter chlorophenolicus A6] gi|219860533|gb|ACL40875.1| UDP-glucose 4-epimerase [Arthrobacter chlorophenolicus A6] Length = 342 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 + +I+ A Y AV ++ D+P + N G + + D+ GI ++ S+ V+ + Sbjct: 75 EAVIHFAGYKAVGESVDQPLRYYGNNVSGTLTLLETMDAYGIRNLVFSSSATVYGANPQM 134 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 P+ E P N YG++K EE Sbjct: 135 PLKEDFPLRATNPYGRTKQHIEE 157 >gi|149174385|ref|ZP_01853012.1| UDP-glucose 4-epimerase, putative [Planctomyces maris DSM 8797] gi|148846930|gb|EDL61266.1| UDP-glucose 4-epimerase, putative [Planctomyces maris DSM 8797] Length = 333 Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 LS+ +Q +EII+ D + +K ++ +I P +Y A D I + Sbjct: 52 LSNEVLQSIEIIQGDIRDTERVKGAVTGCGYVFHLSSLIAIPYSYVAARSYVD-TNITGA 110 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 +N A +++DS+ +++ST V+ R PIDE P + Y SK+ ++ Sbjct: 111 LNVLQA---CRSSDSL-TRLVHVSTSEVYGSAQRVPIDEDHPLVGQSPYSASKIGADKMA 166 Query: 136 ASY 138 SY Sbjct: 167 ESY 169 >gi|323486293|ref|ZP_08091619.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] gi|323400403|gb|EGA92775.1| dTDP-glucose 4,6-dehydratase [Clostridium symbiosum WAL-14163] Length = 340 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ K F + PDV++N AA + VD++ +PE N G + A GI Sbjct: 59 DIADRKFIFELFENEKPDVVVNFAAESHVDRSITDPEAFVRTNVIGTTTLLDACREYGIQ 118 Query: 95 CIY-ISTDYVFDGLSRTPIDE----FSPTNPLN 122 + +STD V+ L P+D F+ PL+ Sbjct: 119 RYHQVSTDEVYGDL---PLDRPDLFFTEETPLH 148 >gi|289556051|ref|ZP_06445261.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 605] gi|289440683|gb|EFD23176.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 605] Length = 351 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 97 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 156 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y I+R ++IFG Sbjct: 157 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFG 204 >gi|212218311|ref|YP_002305098.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] gi|212012573|gb|ACJ19953.1| NAD dependent epimerase/dehydratase family [Coxiella burnetii CbuK_Q154] Length = 331 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 97 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATK 156 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 157 IAGEAMATAYHHRYGLPFVGLRYMNVYG 184 >gi|161525765|ref|YP_001580777.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|189349513|ref|YP_001945141.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|160343194|gb|ABX16280.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] gi|189333535|dbj|BAG42605.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans ATCC 17616] Length = 353 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P +++ AA + VD++ P N G + +A Sbjct: 56 VDICDRAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWN 115 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 116 GLNDADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 175 Query: 142 Y 142 Y Sbjct: 176 Y 176 >gi|47094941|ref|ZP_00232554.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes str. 1/2a F6854] gi|224500275|ref|ZP_03668624.1| hypothetical protein LmonF1_11614 [Listeria monocytogenes Finland 1988] gi|254898743|ref|ZP_05258667.1| hypothetical protein LmonJ_02970 [Listeria monocytogenes J0161] gi|254911768|ref|ZP_05261780.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes J2818] gi|254936094|ref|ZP_05267791.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes F6900] gi|284801415|ref|YP_003413280.1| hypothetical protein LM5578_1166 [Listeria monocytogenes 08-5578] gi|284994557|ref|YP_003416325.1| hypothetical protein LM5923_1120 [Listeria monocytogenes 08-5923] gi|47016559|gb|EAL07479.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes str. 1/2a F6854] gi|258608684|gb|EEW21292.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes F6900] gi|284056977|gb|ADB67918.1| hypothetical protein LM5578_1166 [Listeria monocytogenes 08-5578] gi|284060024|gb|ADB70963.1| hypothetical protein LM5923_1120 [Listeria monocytogenes 08-5923] gi|293589720|gb|EFF98054.1| dTDP-glucose 4,6-dehydratase [Listeria monocytogenes J2818] Length = 328 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|31794957|ref|NP_857450.1| dTDP-glucose 4,6-dehydratase RfbB [Mycobacterium bovis AF2122/97] gi|57117156|ref|YP_178015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Rv] gi|121639701|ref|YP_979925.1| putative dTDP-glucose 4,6-dehydratase rfbB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663652|ref|YP_001285175.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148824991|ref|YP_001289745.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis F11] gi|167970947|ref|ZP_02553224.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis H37Ra] gi|215405839|ref|ZP_03418020.1| hypothetical protein Mtub0_19543 [Mycobacterium tuberculosis 02_1987] gi|215413713|ref|ZP_03422381.1| hypothetical protein Mtub9_20155 [Mycobacterium tuberculosis 94_M4241A] gi|215432765|ref|ZP_03430684.1| hypothetical protein MtubE_19368 [Mycobacterium tuberculosis EAS054] gi|215448131|ref|ZP_03434883.1| hypothetical protein MtubT_20082 [Mycobacterium tuberculosis T85] gi|218755569|ref|ZP_03534365.1| hypothetical protein MtubG1_20034 [Mycobacterium tuberculosis GM 1503] gi|224992196|ref|YP_002646886.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800832|ref|YP_003033834.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 1435] gi|254366331|ref|ZP_04982375.1| hypothetical dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis str. Haarlem] gi|254552899|ref|ZP_05143346.1| hypothetical protein Mtube_21052 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260202989|ref|ZP_05770480.1| hypothetical protein MtubK8_01537 [Mycobacterium tuberculosis K85] gi|289572436|ref|ZP_06452663.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis K85] gi|289747626|ref|ZP_06507004.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis 02_1987] gi|289755917|ref|ZP_06515295.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289759950|ref|ZP_06519328.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T85] gi|289763968|ref|ZP_06523346.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294995302|ref|ZP_06800993.1| hypothetical protein Mtub2_12523 [Mycobacterium tuberculosis 210] gi|297636466|ref|ZP_06954246.1| hypothetical protein MtubK4_20175 [Mycobacterium tuberculosis KZN 4207] gi|297733460|ref|ZP_06962578.1| hypothetical protein MtubKR_20315 [Mycobacterium tuberculosis KZN R506] gi|298527258|ref|ZP_07014667.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|306778146|ref|ZP_07416483.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu001] gi|306778678|ref|ZP_07417015.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu002] gi|306786700|ref|ZP_07425022.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu003] gi|306791067|ref|ZP_07429389.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu004] gi|306791386|ref|ZP_07429688.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu005] gi|306795451|ref|ZP_07433753.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu006] gi|306801426|ref|ZP_07438094.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu008] gi|306805632|ref|ZP_07442300.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu007] gi|306970028|ref|ZP_07482689.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu009] gi|306974262|ref|ZP_07486923.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu010] gi|307081970|ref|ZP_07491140.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu011] gi|307086584|ref|ZP_07495697.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu012] gi|313660791|ref|ZP_07817671.1| hypothetical protein MtubKV_20310 [Mycobacterium tuberculosis KZN V2475] gi|31620555|emb|CAD95999.1| POSSIBLE DTDP-GLUCOSE 4,6-DEHYDRATASE RFBB [Mycobacterium bovis AF2122/97] gi|38490380|emb|CAE55640.1| POSSIBLE dTDP-GLUCOSE 4,6-DEHYDRATASE [Mycobacterium tuberculosis H37Rv] gi|121495349|emb|CAL73836.1| Possible dTDP-glucose 4,6-dehydratase rfbB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151843|gb|EBA43888.1| hypothetical dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis str. Haarlem] gi|148507804|gb|ABQ75613.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis H37Ra] gi|148723518|gb|ABR08143.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis F11] gi|224775312|dbj|BAH28118.1| putative dTDP-glucose 4,6-dehydratase [Mycobacterium bovis BCG str. Tokyo 172] gi|253322336|gb|ACT26939.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 1435] gi|289536867|gb|EFD41445.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis K85] gi|289688154|gb|EFD55642.1| hypothetical dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis 02_1987] gi|289696504|gb|EFD63933.1| dTDP-glucose-4,6-dehydratase [Mycobacterium tuberculosis EAS054] gi|289711474|gb|EFD75490.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715514|gb|EFD79526.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis T85] gi|298497052|gb|EFI32346.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|308213667|gb|EFO73066.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu001] gi|308328400|gb|EFP17251.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu002] gi|308328804|gb|EFP17655.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu003] gi|308332647|gb|EFP21498.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu004] gi|308340139|gb|EFP28990.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu005] gi|308344125|gb|EFP32976.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu006] gi|308347927|gb|EFP36778.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu007] gi|308351795|gb|EFP40646.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu008] gi|308352578|gb|EFP41429.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu009] gi|308356530|gb|EFP45381.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu010] gi|308360478|gb|EFP49329.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu011] gi|308363996|gb|EFP52847.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis SUMu012] gi|326905624|gb|EGE52557.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis W-148] gi|328460560|gb|AEB05983.1| dTDP-glucose 4,6-dehydratase [Mycobacterium tuberculosis KZN 4207] Length = 326 Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 72 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 131 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y I+R ++IFG Sbjct: 132 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFG 179 >gi|312880544|ref|ZP_07740344.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] gi|310783835|gb|EFQ24233.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM 12260] Length = 331 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 36/165 (21%), Positives = 69/165 (41%), Gaps = 23/165 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-VGRPD-------IDLLKPKDFASFFLSFSP- 51 M LV G +G I L+ V++ ++R VG + +D + P+ ++ Sbjct: 1 MSVLVTGADGFIGSHLAEALVREGYVVRAVGLYNSLGSWGWLDRIAPELATKLDVALGDV 60 Query: 52 -------------DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIY 97 + +++ AA A+ + P+ N +G + +AA +G+ I+ Sbjct: 61 RDPRWVRGAMEGCEAVLHLAALIAIPYSYRAPDSYIDTNVKGTLNVLQAARELGVRRVIH 120 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ST V+ PIDE P + Y SK+A ++ S+ ++ Sbjct: 121 TSTSEVYGTARYVPIDENHPLQGQSPYSASKIAADQLAYSFYASF 165 >gi|300858637|ref|YP_003783620.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41] gi|300686091|gb|ADK29013.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis FRC41] gi|302206346|gb|ADL10688.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis C231] gi|302330903|gb|ADL21097.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis 1002] Length = 327 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + + PI E PT P N YG +KLA + + SY Y + T+ Y Sbjct: 111 VFSSTAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRY 166 >gi|300115346|ref|YP_003761921.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] gi|299541283|gb|ADJ29600.1| NAD-dependent epimerase/dehydratase [Nitrosococcus watsonii C-113] Length = 327 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D++ + AA A+ + P +N +G + +A G+ ++ ST V+ T Sbjct: 76 DMVYHLAALIAIPYSYIAPASYVEVNVKGTLNVLQACKEEGVRRMVHTSTSEVYGTAQYT 135 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 PIDE P + Y SK+A ++ V SY Sbjct: 136 PIDEGHPLVGQSPYSASKIAADKLVESY 163 >gi|296165077|ref|ZP_06847630.1| RmlD substrate binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295899570|gb|EFG79023.1| RmlD substrate binding domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 367 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 7/124 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + + PD +++ AA + + +P +A +N G + A ++ P Sbjct: 62 DLLDAEALRDLVTTHEPDAVVHLAAIVS-PLSYRKPALARKVNVGGTENLLAACAALPRP 120 Query: 95 CIYISTDYVFDGLSRTP------IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 +++ SR P I +P NP++ YG+ K+ E + + Y + R Sbjct: 121 PLFLMASSAAVYGSRNPYRQPERITPDTPVNPIDQYGQDKVLAEAAIRASGLPYALFRLG 180 Query: 149 WVYS 152 V S Sbjct: 181 GVIS 184 >gi|203287887|ref|YP_002222902.1| nucleotide sugar epimerase [Borrelia recurrentis A1] gi|201085107|gb|ACH94681.1| nucleotide sugar epimerase [Borrelia recurrentis A1] Length = 352 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 10/132 (7%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---- 88 ++D+L + S F ++ I + AA + + + P+ +IN G I A Sbjct: 74 NLDILNKEQVLSLFNNYKFTHICHLAAQAGIRDSIENPDSYIAINIVGFFNILDACRIYK 133 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI--- 144 DSI +Y ST V+ + P E S T+ PLN+Y SK + E +Y++++ I Sbjct: 134 DSIE-HFVYASTSAVYGLNEKMPSSEDSITDHPLNLYAASKKSNEVIAHAYSSSFNIPTT 192 Query: 145 -LRTAWVYSIFG 155 LR VY +G Sbjct: 193 GLRFFTVYGPYG 204 >gi|218441151|ref|YP_002379480.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] gi|218173879|gb|ACK72612.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] Length = 332 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F + +++ AAY V ++ +P + N G + +A + + I S+ Sbjct: 68 LFSRYPIAAVMHFAAYAYVGESVSDPAKYYRNNVMGTLTLLEAMVAANVKRIVFSSTCAT 127 Query: 105 DGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 G+ + P+ E P NP+N YG +KL E+ +A + Y + + Y Sbjct: 128 YGVPQFMPLTEDHPQNPINPYGSTKLMVEKILADFDRAYGLKSVCFRY 175 >gi|109947021|ref|YP_664249.1| hypothetical protein Hac_0415 [Helicobacter acinonychis str. Sheeba] gi|109714242|emb|CAJ99250.1| galE [Helicobacter acinonychis str. Sheeba] Length = 344 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 8/101 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 + I++ A +V+++ P ++ N + K I S+ V G S + Sbjct: 80 ETILHFGAKISVEESMHLPLEYYTNNTLNTLELVKLCLKHHIKRFIFSSTAVVYGESNSS 139 Query: 112 IDEFSPTNPLNIYGKSKLAGEE------KVASYTNNYVILR 146 ++E SP NP+N YG SK+ E KVA + N VILR Sbjct: 140 LNEESPLNPINPYGASKMMSERILLDASKVADF--NCVILR 178 >gi|21243301|ref|NP_642883.1| NAD(P)H steroid dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] gi|21108841|gb|AAM37419.1| NAD(P)H steroid dehydrogenase [Xanthomonas axonopodis pv. citri str. 306] Length = 319 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQD-VEIIRVGRPDIDLLKPKDF---ASFFLSFSPDVII 55 ++ LV G +G + + L Q VEI +GR DL +F L + PDV+I Sbjct: 3 LRILVTGASGFVGGAFLRRFQGQPAVEIRGIGRRASDLPNYHRLDLSRAFSLDWQPDVVI 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-DGLSRTPID 113 + AA + + ++ N + + G P +Y+S+ VF + +D Sbjct: 63 HAAALASPWGTRAQFQLH---NVQATANVIDFCKRNGCPRLLYVSSSSVFYREAHQYDLD 119 Query: 114 EFSPTNP--LNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 E SP P +N Y ++K GE + Y +LR V+ Sbjct: 120 EDSPIGPAFVNTYAETKYLGETLLDDYPGQKCVLRPRAVFG 160 >gi|293393871|ref|ZP_06638178.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera DSM 4582] gi|291423698|gb|EFE96920.1| dTDP-glucose 4,6-dehydratase [Serratia odorifera DSM 4582] Length = 357 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----D 89 +D+ F + PD +++ AA + VD++ D P N G + +AA Sbjct: 60 VDICDRAALDRVFAQYQPDAVMHLAAESHVDRSIDGPAAFIETNVVGTYTLLEAARHYWQ 119 Query: 90 SIGIP------CIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + P +ISTD V+ L T E +P P + Y SK + + V ++ Sbjct: 120 QLATPRQQDFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWLRT 179 Query: 142 Y 142 Y Sbjct: 180 Y 180 >gi|254993501|ref|ZP_05275691.1| hypothetical protein LmonocytoFSL_11292 [Listeria monocytogenes FSL J2-064] Length = 328 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL+K D I+N AA + VD++ P I N +G + A + Sbjct: 62 DYDLVK-----KLVTDHKIDTIVNFAAESHVDRSIINPGIFIETNVQGTLNLLNVAKELN 116 Query: 93 I-PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + + +STD V+ L T E +P P + Y SK + + V SY Y Sbjct: 117 VAKYLQVSTDEVYGSLGETGYFTEETPIAPNSPYSASKASADLLVRSYFETY 168 >gi|298491212|ref|YP_003721389.1| UDP-glucose 4-epimerase ['Nostoc azollae' 0708] gi|298233130|gb|ADI64266.1| UDP-glucose 4-epimerase ['Nostoc azollae' 0708] Length = 332 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 38/233 (16%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+ + Q L ++ D+E D LL + F + + + +++ +AYT Sbjct: 38 LVYGHRDLVEQVLQVKLIEGDIE-------DRSLLD-----NLFQTDNIEAVMHFSAYTY 85 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNPL 121 V ++ P+ + N G + +A + I S+ G+ + P+ E P NP+ Sbjct: 86 VGESVTNPDKYYRNNVLGTLTLLEAMLAASIKKFVFSSTCATYGVPQFIPLTEHHPQNPI 145 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SIFGSNF--------LLSMLR 164 N YG +KL E+ ++ + Y + + Y + G + L+ M Sbjct: 146 NPYGITKLMVEQILSDFDVAYGLKSVRFRYFNAAGADPRGLLGEDHNPESHLIPLVLMTA 205 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 L K R IS+ + TP R I ++ + +D + G+ ++ DG Sbjct: 206 LGK-RESISIFGTDYPTPDGT--CIRDYIHVS----DLADAHILGLEYLLKDG 251 >gi|221201084|ref|ZP_03574124.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] gi|221206464|ref|ZP_03579477.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221173773|gb|EEE06207.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2] gi|221178934|gb|EEE11341.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD2M] Length = 353 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P +++ AA + VD++ P N G + +A Sbjct: 56 VDICDRAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWN 115 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 116 GLNDADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 175 Query: 142 Y 142 Y Sbjct: 176 Y 176 >gi|86742231|ref|YP_482631.1| UDP-galactose 4-epimerase [Frankia sp. CcI3] gi|86569093|gb|ABD12902.1| UDP-galactose 4-epimerase [Frankia sp. CcI3] Length = 355 Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/132 (19%), Positives = 57/132 (43%), Gaps = 6/132 (4%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 + ++ ++ L + D++ +R +D+ F + D +I+ AA AV + Sbjct: 41 VNSSPRVLDRLRKVVDGDIDFVR-----LDVRDRAALGDVFRRWKIDSVIHFAALKAVGE 95 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 + D P + N + + G+ ++ S+ ++ + PI E +P P N Y Sbjct: 96 SVDIPLEYYDTNVNATLGLVRVMAEHGVRRLVFSSSCAIYGAADKVPIAEDTPARPTNPY 155 Query: 125 GKSKLAGEEKVA 136 ++K E+ +A Sbjct: 156 ARTKWMCEQILA 167 >gi|325295492|ref|YP_004282006.1| GDP-mannose 4,6-dehydratase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065940|gb|ADY73947.1| GDP-mannose 4,6-dehydratase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 341 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 2/114 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DLL+ + PD + N AA + V + ++P + I+A G + +A ++ Sbjct: 57 MDLLELTNIMRVIEKIQPDEVYNLAAQSFVGVSFEQPILTAEIDAMGVLKLLEAIRTLKP 116 Query: 94 PCIYI--STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 + ST +F + P E +P P + YG +KL G +Y ++ I Sbjct: 117 DTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYGVAKLFGHWITVNYRESFNIF 170 >gi|308276588|gb|ADO26487.1| UDP-glucose 4-epimerase [Corynebacterium pseudotuberculosis I19] Length = 327 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 28/56 (50%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ ST + + PI E PT P N YG +KLA + + SY Y + T+ Y Sbjct: 111 VFSSTAATYGEPASVPITEDFPTQPTNPYGATKLAIDHAITSYAQAYGLSATSLRY 166 >gi|317133280|ref|YP_004092594.1| GDP-mannose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] gi|315471259|gb|ADU27863.1| GDP-mannose 4,6-dehydratase [Ethanoligenens harbinense YUAN-3] Length = 343 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 4/96 (4%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--C-IY-ISTDYVFDG 106 PD I N AA + V + D PE ++A G + +A G+ C IY ST +F Sbjct: 74 PDEIYNLAAQSHVQVSFDVPEYTADVDATGVLRVLEAVRVCGLEKTCRIYQASTSELFGK 133 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + P E +P +P + Y +K G V Y Y Sbjct: 134 VEEVPQSETTPFHPYSPYAVAKQYGFWIVKEYREAY 169 >gi|297563819|ref|YP_003682792.1| UDP-glucose 4-epimerase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848268|gb|ADH70286.1| UDP-glucose 4-epimerase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 320 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 36/239 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------GRPDIDLLKPKDF--ASFFLS 48 M+ LV G G + ++++ ++ + V P+ L D A+ L Sbjct: 1 MRLLVTGGAGYVGSVVTALLLRAGHAVTVLDDLSTGHADAVPEGARLVVADVREAADVLD 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF-DG 106 S D +++ AA + V ++ +P + N G A+ +A G+ ++ S+ V+ D Sbjct: 61 PSVDAVLHFAAKSLVGESVADPGKYWHTNVSGTLALLEAVRRHGVGRVVFSSSAAVYGDP 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR---TAWVYSIFG---- 155 PI E P P + YG SKLA + + S+ + V LR A + FG Sbjct: 121 AGDAPIRETDPAVPTSPYGASKLAVDHMLESWAAAHGVGAVSLRYFNVAGAHLGFGERHE 180 Query: 156 --SNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++ + ++LR+A E + V FGT PT R + +A + +D LR + Sbjct: 181 TETHLVPNLLRVAAEGDGHASV---FGTDYPTRDGTAVRDYLHVA----DLADAHLRAL 232 >gi|209363913|ref|YP_001424277.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] gi|207081846|gb|ABS77822.2| NAD dependent epimerase/dehydratase family [Coxiella burnetii Dugway 5J108-111] Length = 331 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 97 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATK 156 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 157 IAGEAMATAYHHRYGLPFVGLRYMNVYG 184 >gi|153208020|ref|ZP_01946554.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|120576220|gb|EAX32844.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii 'MSU Goat Q177'] Length = 330 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 96 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATK 155 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 156 IAGEAMATAYHHRYGLPFVGLRYMNVYG 183 >gi|301168303|emb|CBW27893.1| putative UDP-glucose-4-epimerase [Bacteriovorax marinus SJ] Length = 270 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 21/158 (13%) Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY---TN-NYVILRTAWVY- 151 ++S+ V+ I E +P NP N Y + K+ EE + + TN N ILR VY Sbjct: 88 FLSSVEVYGNQVNEKISEETPLNPHNYYAEGKVLAEESIKDFFKNTNVNVNILRLPGVYS 147 Query: 152 --SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 S+FG L +R + R EI + + G I I L++ + + L Sbjct: 148 QESMFG---LFGAIRRSISRNEILKIQNN-GEDLRDFIFCDDISIIIDELLKKNRSHLLN 203 Query: 210 IFHMTADGGPVSWADFAEYI------FWESAERGGPYS 241 I A G S A+ +YI F E GP S Sbjct: 204 I----ATGESTSVANICKYIQRRNSDFNFKLESSGPQS 237 >gi|300868559|ref|ZP_07113176.1| UDP-galactose 4-epimerase [Oscillatoria sp. PCC 6506] gi|300333437|emb|CBN58368.1| UDP-galactose 4-epimerase [Oscillatoria sp. PCC 6506] Length = 332 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/108 (22%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + + +++ +AY V ++ +P + N G + +A + G+ ++ ST Sbjct: 68 LFATHNITAVMHFSAYAYVGESVTDPAKYYRNNVVGTLTLLEAMLAAGVNKFVFSSTCAT 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + ++ P+ E P NP+N YG +KL E ++ + Y + ++ Y Sbjct: 128 YGVPNKVPLTEDHPQNPINPYGATKLMVERILSDFDAAYNLKSVSFRY 175 >gi|198283742|ref|YP_002220063.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248263|gb|ACH83856.1| NAD-dependent epimerase/dehydratase [Acidithiobacillus ferrooxidans ATCC 53993] Length = 341 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 6/128 (4%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL + + F D ++N AA V + P N G + + + G+ Sbjct: 70 LDLADREGMQTLFAGPHFDAVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLEGCRAQGV 129 Query: 94 P-CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVI----LRT 147 ++ S+ V+ +R P P + P+++Y +K AGE SY + Y I LR Sbjct: 130 DHLLFASSSSVYGANNRLPYSVHDPVDHPVSLYAATKRAGELMAHSYAHLYGIPSTGLRF 189 Query: 148 AWVYSIFG 155 VY +G Sbjct: 190 FTVYGPWG 197 >gi|196233904|ref|ZP_03132742.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] gi|196222098|gb|EDY16630.1| NAD-dependent epimerase/dehydratase [Chthoniobacter flavus Ellin428] Length = 342 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ A + +V + + P N G I AA +G+ +Y S+ V+ +R Sbjct: 92 DYVLHQAGFVSVPLSLENPLACHETNVTGTLNILIAARELGVRRVVYASSSAVYGNDARL 151 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFG 155 P E PL+ YG SK GE + + + + Y +IFG Sbjct: 152 PKIEAEIGQPLSPYGASKRMGEIYGQIFADQFGVESVGLRYFNIFG 197 >gi|94968729|ref|YP_590777.1| UDP-galactose 4-epimerase [Candidatus Koribacter versatilis Ellin345] gi|94550779|gb|ABF40703.1| UDP-galactose 4-epimerase [Candidatus Koribacter versatilis Ellin345] Length = 331 Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 12/60 (20%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 ++ ST ++ RTPI+E P P N YG+SKL E + W +SI G Sbjct: 113 VFSSTAALYGNPERTPIEESDPLKPTNAYGESKLLVERML------------EWFHSIHG 160 >gi|317130379|ref|YP_004096661.1| UDP-glucose 4-epimerase [Bacillus cellulosilyticus DSM 2522] gi|315475327|gb|ADU31930.1| UDP-glucose 4-epimerase [Bacillus cellulosilyticus DSM 2522] Length = 335 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + A+ F + +I+ A AV ++ P + N G + + G+ Sbjct: 57 DLLDKEALANIFNENDIEAVIHFAGLKAVGESVAIPLHYYHNNITGTLHLCEQMKKHGVK 116 Query: 95 CIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEE 133 I S+ G++ + PI E P + N YG+SKL EE Sbjct: 117 TIVFSSSATVYGMTEKMPIVETDPLSATNPYGRSKLMIEE 156 >gi|218883571|ref|YP_002427953.1| NAD-dependent epimerase/dehydratase [Desulfurococcus kamchatkensis 1221n] gi|218765187|gb|ACL10586.1| NAD-dependent epimerase/dehydratase [Desulfurococcus kamchatkensis 1221n] Length = 331 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 29/237 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D++ + AA V + EP I F N + +A + ++ S+ V+ S Sbjct: 84 DIVFHYAANPEVRISSVEPGIHFENNVVATFNVLEAMRLGDVDKLVFASSSTVYGEPSVI 143 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG--SNF----- 158 P +++ P P++IYG SKLA E + Y+ Y +ILR A +I G SN Sbjct: 144 PTPEDYHPLKPISIYGASKLASEVLIQVYSELYGFKALILRYA---NIIGARSNHGVIVD 200 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI-FHMTADG 217 ++ LR R EI Q S L ++ A+ H L N S+ G+ + + Sbjct: 201 FINKLRTNPSRLEILGDGTQ---RKSYLHVSDAVEATMH-LAVNKLNSMHGVDVYNVGNH 256 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKLANT 271 V+ + A+ I E +V +F K P P LD KL +T Sbjct: 257 DWVTVTEIADIIVEEMG-----LGRVDYVFKKTTPDGRGWPGDVKLMLLDIRKLEST 308 >gi|182679044|ref|YP_001833190.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634927|gb|ACB95701.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp. indica ATCC 9039] Length = 328 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 29/169 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPD-----IDL----LK 38 M L+IG G I + L+ VQD V++I P+ I++ + Sbjct: 1 MHILIIGAAGMIGRKLTHRLVQDGRIGEKQIEKLSLVDVIEAPVPEKFTGKIEIRAADIA 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---- 94 KD A+ ++ PD++ + AA + +AE + +SIN +G + +A G Sbjct: 61 QKDAAATIIASRPDLVFHLAAIVS-GEAEANFDKGYSINLDGTRFLFEAIRHEGEKSPYK 119 Query: 95 --CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 I+ S+ VF I++ PL+ YG K GE +A Y+ Sbjct: 120 PRVIFTSSLAVFGAPLPDVIEDDFILTPLSSYGTQKAIGELLLADYSRK 168 >gi|165918908|ref|ZP_02218994.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] gi|165917378|gb|EDR35982.1| NAD dependent epimerase/dehydratase family protein [Coxiella burnetii RSA 334] Length = 330 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P AF N +G + + + G+ ++ S+ V+ P+ E P N YG +K Sbjct: 96 PRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTEAHPFNNRTFYGATK 155 Query: 129 LAGEEKVASYTNNY----VILRTAWVYS 152 +AGE +Y + Y V LR VY Sbjct: 156 IAGEAMATAYHHRYGLPFVGLRYMNVYG 183 >gi|163839924|ref|YP_001624329.1| UDP-glucose 4-epimerase [Renibacterium salmoninarum ATCC 33209] gi|162953400|gb|ABY22915.1| UDP-glucose 4-epimerase [Renibacterium salmoninarum ATCC 33209] Length = 337 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 IDLL F + D +I+ A AV ++ EP + N G + +A D+ G+ Sbjct: 57 IDLLDEVALTELFSQENIDSVIHFAGLKAVGESVREPLRYYHNNVTGTINLLRAMDAHGV 116 Query: 94 PCI-YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 I + S+ V+ GLS P E N YG++K Sbjct: 117 RNIVFSSSATVYGGLSPFPYIEKMEIGSDNPYGRTK 152 >gi|68146481|emb|CAH10168.1| ChaS2 protein [Streptomyces chartreusis] Length = 332 Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---S 108 D++++ AA + VD + +PE N G + +A +ISTD VF L S Sbjct: 73 DLVVHLAAESHVDNSLRDPEPFVRSNVMGTYVLLEAVRRYDRRFHHISTDEVFGDLPLDS 132 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 E SP NP + Y +K + + V ++ ++ + T Sbjct: 133 EEKFTEASPYNPSSPYSATKASSDMLVRAWVRSFGVAAT 171 >gi|220920414|ref|YP_002495715.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219945020|gb|ACL55412.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 381 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%) Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 + A+GAG +A+AA +IG I++S D SP+ Y ++K AGE KV Sbjct: 102 LQADGAGLVARAATAIGARMIHVSA---------IGADPESPSA----YARTKAAGEAKV 148 Query: 136 ASYTNNYVILRTAWVYSIFGSNF 158 + VI R + ++ S F Sbjct: 149 LAACPEAVIFRPSIIFGPGDSFF 171 >gi|332297206|ref|YP_004439128.1| UDP-glucose 4-epimerase [Treponema brennaborense DSM 12168] gi|332180309|gb|AEE15997.1| UDP-glucose 4-epimerase [Treponema brennaborense DSM 12168] Length = 326 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 62/151 (41%), Gaps = 28/151 (18%) Query: 1 MKCLVIGNNGQIA-----------------QSLSSMCVQDVEIIRVGRPDI---DLLKPK 40 MK LVIG G I +LSS +Q++ D D+L P+ Sbjct: 1 MKVLVIGGAGYIGSHVVKELMKAGHTVTVFDNLSSGLLQNL----FNENDFIAGDILYPE 56 Query: 41 DF-ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYI 98 A+F F D ++ AA+ A ++ PE N G I AA G ++ Sbjct: 57 TLDAAFARGF--DAFVHLAAFKAAGESMIVPEKYSINNINGTLNILNAAVKHGCKRMVFS 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 S+ VF PI+E P NP N YG +KL Sbjct: 115 SSAAVFGEPQYLPINEEHPKNPENYYGFTKL 145 >gi|299149041|ref|ZP_07042103.1| putative epimerase/dehydratase family protein [Bacteroides sp. 3_1_23] gi|298513802|gb|EFI37689.1| putative epimerase/dehydratase family protein [Bacteroides sp. 3_1_23] Length = 322 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 31/190 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD-----FASFF--------- 46 MK + G +G + + LS+ ++ E + VG D+L D A F Sbjct: 1 MKYYIFGGDGFVGRYLSNALIERGENVVVG----DILSTLDERINKKAKFINVDIRDKSA 56 Query: 47 ---LSFSPD-VIINPAA---YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + PD ++IN AA +T V K + E +S N G I + + + + Sbjct: 57 IRKIDIMPDDLVINLAANQYHTKVPK--NRKEYFYSTNYVGTKNILEVMEEKNCMRYLMF 114 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFG 155 +TD + P+D P NP YG+SK A EE Y N I R + Sbjct: 115 TTDMTYGRPQYLPVDIKHPQNPFGPYGQSKKACEEICREYRQKGMNITIFRPRMINGPGR 174 Query: 156 SNFLLSMLRL 165 L+ + +L Sbjct: 175 LGILVKLFKL 184 >gi|270262330|ref|ZP_06190602.1| NAD-dependent epimerase/dehydratase [Serratia odorifera 4Rx13] gi|270044206|gb|EFA17298.1| NAD-dependent epimerase/dehydratase [Serratia odorifera 4Rx13] Length = 318 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 10/111 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +IN AA + D + + +N EGA + A S+ I I ++ G Sbjct: 65 DAVINLAAEHQDNV--DPISLYYQVNVEGARNVCMTASSLNIRQIIFTSSVAVYGFVTQE 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILRTAWVYSIFGSN 157 E P N YGKSKL E + A N I+R V FG N Sbjct: 123 TGEEGRFEPFNHYGKSKLEAEYVYEAWRKADGDNKLTIIRPTVV---FGEN 170 >gi|224061581|ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|222847809|gb|EEE85356.1| predicted protein [Populus trichocarpa] Length = 417 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGI 93 DL +PK S F + D +++ AA V ++ P + +I + + A + Sbjct: 130 DLGEPKTVNSIFSQNAFDAVMHFAAVAYVGESTVYPLKYYHNITSNTLVVLESMAANDVK 189 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAW 149 IY ST + + PI E +P P+N YGK+K E+ + ++ N +ILR Sbjct: 190 TLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDIILDFSKNSDMAIMILR--- 246 Query: 150 VYSIFGSN 157 +++ GS+ Sbjct: 247 YFNVIGSD 254 >gi|221213796|ref|ZP_03586770.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] gi|221166585|gb|EED99057.1| dTDP-glucose 4,6-dehydratase [Burkholderia multivorans CGD1] Length = 353 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA------ 87 +D+ + F P +++ AA + VD++ P N G + +A Sbjct: 56 VDICDRAALDALFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWN 115 Query: 88 ----ADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 AD +++STD VF LS T E +P P + Y +K + V +Y + Sbjct: 116 GLNDADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHT 175 Query: 142 Y 142 Y Sbjct: 176 Y 176 >gi|218462554|ref|ZP_03502645.1| UDP-glucose 4-epimerase protein [Rhizobium etli Kim 5] Length = 326 Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 11/120 (9%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D D+LK F+ + II+ A V + +P + N+ A+ A+ G Sbjct: 54 DADILK-----KIFIENDVEAIIHFAGSAVVPVSVADPLSYYDNNSGKTRALLSASIKAG 108 Query: 93 IPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILR 146 I S+ G + P+ E + NP N YG+SKL E + A+Y NYV LR Sbjct: 109 IRNFVFSSTAAVYGQQQNDLPVKENASLNPENPYGQSKLMTEFMLRDAAAAYDFNYVALR 168 >gi|332827127|gb|EGJ99912.1| hypothetical protein HMPREF9455_03785 [Dysgonomonas gadei ATCC BAA-286] Length = 337 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 8/162 (4%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP--DVIINPAAYTAVDKAEDE 69 I +S S +QD I + P D K + F+S D II+ A T D Sbjct: 34 IRKSSSREYLQDTRIQFIDLPFQDKDKLTEDLRHFVSEHGKFDYIIHNAGVTKCLNPNDF 93 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF---DGLSRTPIDEFSPTNPLNIYGK 126 ++ F A A+ K AD++ I +S+ + D ++ P+ NP YGK Sbjct: 94 DKVNFQYTANFIDAL-KDADAVPEKFILMSSLSAYGLGDEINYIPLRITDVPNPNTAYGK 152 Query: 127 SKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAK 167 SKL E + S ++ Y+ILR VY ++ L M++ K Sbjct: 153 SKLKAEMYLQSTSDFPYIILRPTGVYGPREKDYFL-MVKTVK 193 >gi|294637939|ref|ZP_06716207.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] gi|291088900|gb|EFE21461.1| dTDP-glucose 4,6-dehydratase [Edwardsiella tarda ATCC 23685] Length = 356 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 14/108 (12%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS--IGIPCI--------Y 97 + PD I++ AA + VD++ D P N G + +AA + I +P + Sbjct: 74 QYQPDAIMHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEAARAYWITLPATRRAAFRFHH 133 Query: 98 ISTDYVFDGLSRTPIDEF---SPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L + P D F +P P + Y SK + + V ++ Y Sbjct: 134 ISTDEVYGDL-QGPQDLFREDTPYAPSSPYSASKASSDHLVRAWLRTY 180 >gi|229845924|ref|ZP_04466036.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 7P49H1] gi|229810928|gb|EEP46645.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 7P49H1] Length = 334 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ K S F + PD +++ AA + VD++ N G + + Sbjct: 51 RYAFEQIDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEV 110 Query: 88 ADS----------IGIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ LS E+SP +P + Y SK A + V Sbjct: 111 AKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLV 170 Query: 136 ASYTNNY 142 ++ Y Sbjct: 171 YAWHRTY 177 >gi|20560102|gb|AAM27844.1|AF498418_18 ORF_18; similar to 3-beta hydroxysteroid dehydrogenase/i [Pseudomonas aeruginosa] Length = 316 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEK 134 N E +AKAA G + +G S R P+DE SP NP Y SK E+ Sbjct: 90 NCEATVRLAKAALIDGAQRFVFVSSIGVNGASSGRLPLDESSPANPHTDYAVSKWEAEQA 149 Query: 135 VASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 + + V++R VY +LRL + R + P A+ R Sbjct: 150 LHRLLDGREMALVVVRPPMVYDTDAPGNFARLLRLVSKGRVL---------PLGAIDNHR 200 Query: 191 AIIQIAHNLIE-----NSDTSLRGIFHMTADGGPVSWADFAEYI 229 +I+ + NL+ S G +DG VS ++ Y+ Sbjct: 201 SIVSL-RNLVHFLQLCGEHPSAPGHILFPSDGEDVSTSEIIAYL 243 >gi|88808164|ref|ZP_01123675.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7805] gi|88788203|gb|EAR19359.1| dTDP-glucose-4,6-dehydratase [Synechococcus sp. WH 7805] Length = 355 Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 11/122 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA----GAIAKAAD 89 +DL + PD++++ AA + VD++ P + N G A+ + D Sbjct: 78 VDLADATAVREAVQAADPDLVMHLAAESHVDRSITGPGVFIESNVTGTYNLLQAVREHYD 137 Query: 90 SIG------IPCIYISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ +ISTD VF L + E +P +P + Y SK A + V+++ + Y Sbjct: 138 TLNGERKEHFRLHHISTDEVFGSLGAEGRFSETTPYDPRSPYSSSKAASDHLVSAWHHTY 197 Query: 143 VI 144 + Sbjct: 198 AL 199 >gi|294053938|ref|YP_003547596.1| CDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293613271|gb|ADE53426.1| CDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 369 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVFDGL 107 PD++ + AA V + ++P F+ N G + +A + C ++I+TD ++ L Sbjct: 81 QPDIVFHLAAQPLVRYSYEQPVETFASNVMGTVHLLEALRFLDKRCQAVFITTDKCYENL 140 Query: 108 -SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 R P E + Y SK A E +ASY ++ Sbjct: 141 EQRRPYSEEDRMGGHDPYSASKGAAELVIASYRRSF 176 >gi|126736255|ref|ZP_01751998.1| putative nucleotide di-P-sugar epimerase or dehydratase [Roseobacter sp. CCS2] gi|126714421|gb|EBA11289.1| putative nucleotide di-P-sugar epimerase or dehydratase [Roseobacter sp. CCS2] Length = 322 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 23/158 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ + G+NG + ++ V +D ++I V +DL SF + PD++I A Sbjct: 1 MRIFLAGHNGMVGSAILRKLVATRDHDVITVAHAALDLTNQAAVRSFVWAKKPDLVIIAA 60 Query: 59 AYTA---------VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 A D +D IA ++ E A + +G CIY + Sbjct: 61 AKVGGIMANDTKPADFIQDNLMIASNLIQEAHAAGVQRLIQLGSSCIYPRD-------TA 113 Query: 110 TPIDEFS----PTNPLN-IYGKSKLAGEEKVASYTNNY 142 PI E + P P N Y +K+A + SY Y Sbjct: 114 QPIPESALMTGPLEPTNEPYAMAKIAAIKLCESYNRQY 151 >gi|90417248|ref|ZP_01225175.1| CDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2207] gi|90331024|gb|EAS46285.1| CDP-glucose 4,6-dehydratase [marine gamma proteobacterium HTCC2207] Length = 348 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 9/100 (9%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDG 106 F PD++I+ AA V A D+P + N G+ + +A DS +YI++D ++ Sbjct: 76 FQPDIVIHLAAQALVRHAYDDPFYTYETNVMGSLNLLRAVDSTPSVKSLVYITSDKCYEN 135 Query: 107 LSRT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L D+ +P Y SK E +S+ +Y Sbjct: 136 LEWVWGYREHDQLGGHDP---YSASKACAEIVFSSFVRSY 172 >gi|145219287|ref|YP_001129996.1| UDP-galactose 4-epimerase [Prosthecochloris vibrioformis DSM 265] gi|145205451|gb|ABP36494.1| UDP-galactose 4-epimerase [Chlorobium phaeovibrioides DSM 265] Length = 322 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++ AA A ++ +PE N +G I A GI ++ S+ V+ Sbjct: 67 DGCVHLAALKAAGQSMLQPEAYAEANLKGTINILNQASMAGIRALVFSSSAAVYGSPQYL 126 Query: 111 PIDEFSPTNPLNIYGKSKL 129 PIDE P P N YG +KL Sbjct: 127 PIDEEHPKEPENFYGFTKL 145 >gi|315928000|gb|EFV07321.1| NAD dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 272 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 22 DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 81 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 82 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 113 >gi|304408090|ref|ZP_07389740.1| polysaccharide biosynthesis protein CapD [Paenibacillus curdlanolyticus YK9] gi|304343109|gb|EFM08953.1| polysaccharide biosynthesis protein CapD [Paenibacillus curdlanolyticus YK9] Length = 327 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 24/126 (19%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D + + AA V ED+P A N G + +AA + + IYISTD Sbjct: 75 DYVFHLAALKHVPVCEDQPYEALKTNVIGTQNVIEAAIANHVKRVIYISTD--------- 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN------NYVILRTAWVYSIFGS--NFLLSM 162 NP N YG +K G EK+ Y N +V +R V GS + ++ Sbjct: 126 -----KAANPSNFYGMTKAIG-EKLIVYANLLRSETKFVCVRGGNVLGTNGSVVHLFMNQ 179 Query: 163 LRLAKE 168 +R K+ Sbjct: 180 IRTKKQ 185 >gi|225465745|ref|XP_002264946.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296087462|emb|CBI34051.3| unnamed protein product [Vitis vinifera] Length = 417 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL K F D +++ AA V ++ +P + + KA + G+ Sbjct: 130 DLGDAKAVNKIFSENEFDAVMHFAAVAYVGESTMDPLRYYHNITSNTLMVLKAMAAHGVK 189 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAW 149 IY ST + + PI E +P P+N YGK+K E+ + ++ N ++LR Sbjct: 190 TLIYSSTCATYGEPKKMPITEGTPQVPINPYGKAKKMAEDMIIDFSKNSDMAVMVLR--- 246 Query: 150 VYSIFGSN 157 +++ GS+ Sbjct: 247 YFNVIGSD 254 >gi|89896062|ref|YP_519549.1| hypothetical protein DSY3316 [Desulfitobacterium hafniense Y51] gi|89335510|dbj|BAE85105.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 337 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F S PD+++N AA + VD++ + P + + N G + A GI Sbjct: 59 DIADQQAIYTIFESEKPDIVVNFAAESHVDRSIENPALFLTTNVMGIQVLLDACRIFGIG 118 Query: 95 CIY-ISTDYVFDGLSRTPID 113 + +STD V+ L P+D Sbjct: 119 RFHQVSTDEVYGDL---PLD 135 >gi|15843407|ref|NP_338444.1| hypothetical protein MT3893 [Mycobacterium tuberculosis CDC1551] gi|254233278|ref|ZP_04926604.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C] gi|13883774|gb|AAK48258.1| NAD-dependent epimerase/dehydratase family protein [Mycobacterium tuberculosis CDC1551] gi|124603071|gb|EAY61346.1| hypothetical protein TBCG_03711 [Mycobacterium tuberculosis C] gi|323717651|gb|EGB26853.1| hypothetical protein TMMG_00278 [Mycobacterium tuberculosis CDC1551A] Length = 712 Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%) Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF-DGLSRTP 111 V+ + AA+ VD++ +PE N G + +A IY+ST V+ DG + Sbjct: 72 VVFHLAAHVNVDQSLGDPESFLETNVMGTYRVLEAVRRYRNRLIYVSTCEVYGDGHNLKE 131 Query: 112 ---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 +DE + P + YG SK A + SY +Y I+R ++IFG Sbjct: 132 GERLDEHAELKPNSPYGASKAAADRLCYSYFRSYGLDVTIVRP---FNIFG 179 >gi|315609093|ref|ZP_07884062.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae ATCC 33574] gi|315249163|gb|EFU29183.1| dTDP-glucose 4,6-dehydratase [Prevotella buccae ATCC 33574] Length = 387 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 16/114 (14%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------DSIGIPCI 96 F D ++N AA + VD++ ++P++ S+N G + AA D+ G P Sbjct: 73 LFAEHDIDYVVNFAAESHVDRSIEDPQLFLSVNILGTQNLLDAARRAWVTGKDAQGYPTW 132 Query: 97 -------YISTDYVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L + E +P P + Y SK + + V +Y + Y Sbjct: 133 KAGKRYHQVSTDEVYGSLGAEGYFTEQTPLCPHSPYSASKTSADLFVMAYRDTY 186 >gi|332653132|ref|ZP_08418877.1| dTDP-glucose 4,6-dehydratase [Ruminococcaceae bacterium D16] gi|332518278|gb|EGJ47881.1| dTDP-glucose 4,6-dehydratase [Ruminococcaceae bacterium D16] Length = 327 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 11/105 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPCIYISTDYVF 104 F P +IN AA + VD++ PE+ N G + A + G+ +STD V+ Sbjct: 70 FEEEQPQAVINFAAESHVDRSIQAPEVFLQTNVLGTQVLLDACRAHGGVRFHQVSTDEVY 129 Query: 105 DGLSRTPID-------EFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 L P+D E +P P + Y SK + +Y Y Sbjct: 130 GDL---PLDRPDLLFTEENPLRPSSPYSASKAGADLLTLAYCRTY 171 >gi|228946126|ref|ZP_04108461.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813539|gb|EEM59825.1| DTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 299 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ P I N G A+ +A + + ISTD V+ LS+T Sbjct: 57 DYVLNFAAESHVDRSIKNPHIFVLTNILGTQALLHSAYKAKVKKFVQISTDEVYGTLSQT 116 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E S P + Y SK + + V +Y Y Sbjct: 117 GAFTEHSIIAPNSPYSASKASADLMVRAYHETY 149 >gi|149907466|ref|ZP_01896213.1| UDP-glucose 4-epimerase [Moritella sp. PE36] gi|149809136|gb|EDM69065.1| UDP-glucose 4-epimerase [Moritella sp. PE36] Length = 335 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+L + F + +I+ A AV ++ P + N I + D+ + Sbjct: 58 DVLDSELLNRIFTEHDINAVIHFAGLKAVGESNQIPLTYYRNNIATTINILEVMDAHNVK 117 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 ++ S+ V+ + PIDE PT+ N YG+SKL EE +A Sbjct: 118 NFVFSSSATVYGDPASVPIDESFPTSATNPYGRSKLMVEEILA 160 >gi|134102142|ref|YP_001107803.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] gi|133914765|emb|CAM04878.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea NRRL 2338] Length = 324 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 8/132 (6%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 I++ AA T+V ++ D P ++ N + + A G+ + ST+ V + R I Sbjct: 84 IVHLAAITSVLRSVDRPAETYAANVAVTQELLELARLRGLGQFVLASTNAVVGDIGRGTI 143 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFG------SNFLLSMLRL 165 E P PL YG +K A E ++ Y Y + A ++ I+G +F+ ++R Sbjct: 144 SESLPLRPLTPYGATKAACEMLLSGYAGAYGLATCALRFTNIYGPGMGHKDSFIPRLMRA 203 Query: 166 AKERREISVVCD 177 A + V D Sbjct: 204 ALAGAGVEVYGD 215 >gi|269837798|ref|YP_003320026.1| UDP-glucose 4-epimerase [Sphaerobacter thermophilus DSM 20745] gi|269787061|gb|ACZ39204.1| UDP-glucose 4-epimerase [Sphaerobacter thermophilus DSM 20745] Length = 326 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 15/151 (9%) Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFD 105 LS D + + AA + V ++ EP F N G + +A + G+ ++ ST V+ Sbjct: 62 LSRGFDGVFHFAALSLVGESVAEPGRYFRTNIGGTVNVVEAMRATGVNRLVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR---TAWVYSIFG--- 155 PI E +P P++ YG SKLA + + +Y V LR A + FG Sbjct: 122 IPDCVPIPETAPVRPISPYGASKLAVDTFLGFAAEAYGLGAVSLRYFNVAGAWDRFGEDH 181 Query: 156 ---SNFLLSMLRLAKERR-EISVVCDQFGTP 182 ++ + L++A RR ++V + + TP Sbjct: 182 RPETHLIPLALQVALGRRPHLAVFGNDYPTP 212 >gi|125719123|ref|YP_001036256.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Streptococcus sanguinis SK36] gi|125499040|gb|ABN45706.1| DTDP-4-dehydrorhamnose 3,5-epimerase, putative [Streptococcus sanguinis SK36] Length = 343 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 71 EIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPID---EFSPT-NPLNIYG 125 E + N G + +A G+ +YIS+ V+ +R +D E +P N LN Y Sbjct: 100 EQFYQTNVVGTKLVMEACRHFGVQRLVYISSPSVYAA-ARDQLDIKEEAAPQENELNFYI 158 Query: 126 KSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKE 168 KSKL E V SY VILR ++ I ++ +LRL+++ Sbjct: 159 KSKLMAERIVRSYPQVPSVILRPRGLFGIGDTSIFPRILRLSQK 202 >gi|85717223|ref|ZP_01048179.1| putative epimerase/dehydratase [Nitrobacter sp. Nb-311A] gi|85695937|gb|EAQ33839.1| putative epimerase/dehydratase [Nitrobacter sp. Nb-311A] Length = 338 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DVI++ AA + ++ E+ +IN + + A+A+ A+ G+ ++ S+ ++ Sbjct: 64 DVIVHLAAISNDPMGKEFEEVTEAINEKASVALAQMAEQRGVARFVFASSCSIYGAAEGR 123 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 P E NPL Y +SK+A E Sbjct: 124 PKRENDSLNPLTAYARSKVAME 145 >gi|75758501|ref|ZP_00738622.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494028|gb|EAO57123.1| dTDP-glucose 4,6-dehydratase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 318 Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ P I N G A+ ++A + + ISTD V+ LS+T Sbjct: 76 DYVLNFAAESHVDRSIKSPHIFVQTNILGTQALLQSAYKTKVKKFVQISTDEVYGTLSQT 135 Query: 111 -PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E S P + Y SK + + V +Y + Sbjct: 136 GAFTEHSIIAPNSPYSASKASADLMVRAYHETF 168 >gi|308270861|emb|CBX27471.1| hypothetical protein N47_H22930 [uncultured Desulfobacterium sp.] Length = 328 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 21/188 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE----IIRVGRPDIDLLKPKDF-----------ASF 45 M+ L+ G+ G I L + +IR G +ID LK D + + Sbjct: 1 MRYLITGSTGFIGPYLVRRLISSGNTLRCMIRKGS-NIDALKEFDVEYVTGDITDPASLY 59 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 +++ D +I+ A + + +N G I KAA S G+ I+ S+ Sbjct: 60 YIAKDVDCLIHMATLGHMSNFTVSEFMFDEVNVRGTLNIMKAALSAGVNKIIHCSSVAAM 119 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFLL 160 P E S P + YG+SKL E++V + VI+R + VY + +L Sbjct: 120 GICPDIPATEKSICYPHHPYGRSKLRAEKEVLNMVKQEGLPAVIIRFSMVYGPGDTRDML 179 Query: 161 SMLRLAKE 168 + R+AK+ Sbjct: 180 KLTRMAKK 187 >gi|298374800|ref|ZP_06984758.1| capsular polysaccharide biosynthesis protein Cap5N [Bacteroides sp. 3_1_19] gi|298269168|gb|EFI10823.1| capsular polysaccharide biosynthesis protein Cap5N [Bacteroides sp. 3_1_19] Length = 285 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 K DF+SF DV+I+ A + ED ++ +SIN + I + A G+ I Sbjct: 44 KKTDFSSF------DVVIDVAGIAHIKITEDLRDLFYSINRDMTIDICQTARESGVKQFI 97 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++S+ V+ G + + + NP + YG SKL ++ + S ++ Sbjct: 98 FLSSMNVY-GDDCGIVTDKNNENPSSFYGDSKLQADKVIQSMNDD 141 >gi|262195907|ref|YP_003267116.1| UDP-glucose 4-epimerase [Haliangium ochraceum DSM 14365] gi|262079254|gb|ACY15223.1| UDP-glucose 4-epimerase [Haliangium ochraceum DSM 14365] Length = 327 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + +P+ I++ AA+ V ++ P N + ++A + G+ I+ ST +FD Sbjct: 64 AHAPEAIMHFAAHAQVGESMRAPFRYLRDNVLCGANLFESAAAHGVGRIIFSSTSNLFDA 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILR 146 + PI E P P + YG+SKL E + Y YV LR Sbjct: 124 PAVLPIPESEPPAPASPYGESKLVLERYLHWLERLYGCRYVCLR 167 >gi|163754699|ref|ZP_02161821.1| capsular polysaccharide biosynthesis protein CapD [Kordia algicida OT-1] gi|161325640|gb|EDP96967.1| capsular polysaccharide biosynthesis protein CapD [Kordia algicida OT-1] Length = 678 Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 26/133 (19%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + F + P V+ + AAY V ED P A +N G +A A Sbjct: 379 DVRDKEKLENIFELYKPQVVYHAAAYKHVPLMEDNPSQAIFVNVMGTKNVADTA------ 432 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----------YTNNYVI 144 Y D D+ NP N+ G SK E V + Y NYV Sbjct: 433 -----LKYQTDKFVLVSTDK--AVNPSNVMGASKRIAEIYVQTLQEAFKNDNRYVTNYVT 485 Query: 145 LRTAWVYSIFGSN 157 R ++ GSN Sbjct: 486 TRFG---NVLGSN 495 >gi|299140992|ref|ZP_07034130.1| polysaccharide biosynthesis protein [Prevotella oris C735] gi|298577958|gb|EFI49826.1| polysaccharide biosynthesis protein [Prevotella oris C735] Length = 648 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 15/92 (16%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 K F F PD + + AAY V ED P + N G IA + G+ + Sbjct: 357 KQARMERLFDEFRPDYVFHAAAYKHVPMMEDNPSESIQNNVYGTKVIADLSVKYGVKKFV 416 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 ISTD NP N+ G SK Sbjct: 417 MISTD--------------KAVNPTNVMGCSK 434 >gi|281424266|ref|ZP_06255179.1| putative epimerase/dehydratase WbiI [Prevotella oris F0302] gi|281401535|gb|EFB32366.1| putative epimerase/dehydratase WbiI [Prevotella oris F0302] Length = 648 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 15/92 (16%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 K F F PD + + AAY V ED P + N G IA + G+ + Sbjct: 357 KQARMERLFDEFRPDYVFHAAAYKHVPMMEDNPSESIQNNVYGTKVIADLSVKYGVKKFV 416 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 ISTD NP N+ G SK Sbjct: 417 MISTD--------------KAVNPTNVMGCSK 434 >gi|242240688|ref|YP_002988869.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech703] gi|242132745|gb|ACS87047.1| dTDP-glucose 4,6-dehydratase [Dickeya dadantii Ech703] Length = 353 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ S F PD++++ AA + VD++ D P N G + +A + Sbjct: 57 VDICNRTALDSVFQQHQPDMVMHLAAESHVDRSIDGPAAFIQTNIVGTYTLLEATRAYWS 116 Query: 92 GIP--------CIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +P +ISTD V+ L +T E +P P + Y SK + + V ++ Sbjct: 117 ALPESRKSAFRFHHISTDEVYGDLEKTDDLFTESTPYAPSSPYSASKASSDHLVRAWYRT 176 Query: 142 Y 142 Y Sbjct: 177 Y 177 >gi|223937500|ref|ZP_03629404.1| CDP-glucose 4,6-dehydratase [bacterium Ellin514] gi|223893851|gb|EEF60308.1| CDP-glucose 4,6-dehydratase [bacterium Ellin514] Length = 369 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 10/121 (8%) Query: 30 GRPDIDLLKPKDFASF---FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 GR ++ +DFA+ L+ PD +++ AA V + ++P ++ N G + + Sbjct: 56 GRLSSEIADIRDFAAVKKSILATQPDFVLHLAAQPLVRLSYEQPLETYATNVMGTAHVLE 115 Query: 87 AADSIGIPC--IYISTDYVFDGLSRTPIDEFSPTNPL---NIYGKSKLAGEEKVASYTNN 141 + S+ PC + ++TD ++ ++ + + +PL + Y SK A E ++Y + Sbjct: 116 SLRSLKKPCSAVMVTTDKCYE--NKEWVYGYREEDPLGGHDPYSSSKAAAEIVTSAYNRS 173 Query: 142 Y 142 + Sbjct: 174 F 174 >gi|28900734|ref|NP_800389.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|153838095|ref|ZP_01990762.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ3810] gi|260362633|ref|ZP_05775540.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus K5030] gi|260877672|ref|ZP_05890027.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AN-5034] gi|260897185|ref|ZP_05905681.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus Peru-466] gi|28809180|dbj|BAC62222.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus RIMD 2210633] gi|149748481|gb|EDM59340.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AQ3810] gi|308088214|gb|EFO37909.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus Peru-466] gi|308090765|gb|EFO40460.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus AN-5034] gi|308112783|gb|EFO50323.1| UDP-glucose 4-epimerase [Vibrio parahaemolyticus K5030] Length = 338 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 18 SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF---SPDVIINPAAYTAVDKAEDEPEIAF 74 S ++ +E +R +P +D A+ + + + +I+ A AV ++ ++P + Sbjct: 38 STVLERIEKVRGVKPTFIEADIRDKAALVEALKVHNIEAVIHFAGLKAVGESVEKPLEYY 97 Query: 75 SINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 N G + A G+ ++ S+ V+ + PI E PT+ N YG+SKL EE Sbjct: 98 DNNVNGTLVLVDAMREAGVKSLVFSSSATVYGDPASVPITEDFPTSATNPYGRSKLMVEE 157 Query: 134 KVASY 138 + + Sbjct: 158 CLTDF 162 >gi|71276347|ref|ZP_00652624.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Dixon] gi|71901361|ref|ZP_00683455.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] gi|71162809|gb|EAO12534.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Dixon] gi|71728860|gb|EAO30997.1| dTDP-glucose 4,6-dehydratase [Xylella fastidiosa Ann-1] Length = 353 Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 11/106 (10%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------ADSIGIPCIY 97 + PD ++N AA + VD++ D P N GA + +A A ++ Sbjct: 73 THRPDAVLNFAAESHVDRSIDAPAAFIQTNVVGALLLLEAVCGYWKALPEAARAAFRFLH 132 Query: 98 ISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +STD V+ L T E + P + Y SK A + V ++ + Y Sbjct: 133 VSTDEVYGSLGETGAFTERTAYAPNSPYSASKAASDHLVRAFHHTY 178 >gi|330967440|gb|EGH67700.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 299 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA----------DSIGIPC 95 F P +++ AA + VD++ PE N G + +AA D Sbjct: 1 FAEHRPRAVVHFAAESHVDRSITGPEAFVETNVMGTFRLLEAARAYWNGLEATDKAAFRF 60 Query: 96 IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G + E +P P + Y SK A + V SY + Y Sbjct: 61 LHVSTDEVYGTLGANDPAFTETTPYMPNSPYSASKAASDHLVRSYHHTY 109 >gi|212224987|ref|YP_002308223.1| galE-2 UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] gi|212009944|gb|ACJ17326.1| galE-2 UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] Length = 317 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 +V+ + AA V PE+ + N + +A G+ ++ S+ V+ Sbjct: 71 EVVFHLAANPEVRIGSQSPELLYETNVVITYNLLEAMRKSGVKYLVFTSSSTVYGDAEVI 130 Query: 111 PI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P ++++P P+++YG +KLA E ++ Y + + Sbjct: 131 PTPEDYAPLEPISVYGGAKLAAEALISGYAHTF 163 >gi|163747635|ref|ZP_02154982.1| UDP-glucose 4-epimerase [Oceanibulbus indolifex HEL-45] gi|161379105|gb|EDQ03527.1| UDP-glucose 4-epimerase [Oceanibulbus indolifex HEL-45] Length = 377 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +++ A AV ++ P + + N GA ++ A +G I+ S+ V+ Sbjct: 78 DAVVHFAGKKAVAESVANPLLYYHDNITGAVSVLSAMREVGCKKLIFSSSATVYGDTEVL 137 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 PI E +PT+ N YG++KL EE Sbjct: 138 PICETAPTSVSNPYGRTKLMIEE 160 >gi|86150012|ref|ZP_01068240.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839458|gb|EAQ56719.1| NAD-dependent epimerase/dehydratase family protein [Campylobacter jejuni subsp. jejuni CF93-6] Length = 330 Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + A A+ + P+ N G + +AA I I+ ST V+ Sbjct: 80 DAIFHLGALIAIPYSYAAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTSEVYGTAFYV 139 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PIDE P P + Y SK+A + SY N++ Sbjct: 140 PIDEKHPLQPQSPYSASKIAADMMALSYYNSF 171 >gi|329891309|ref|ZP_08269652.1| protein capI [Brevundimonas diminuta ATCC 11568] gi|328846610|gb|EGF96174.1| protein capI [Brevundimonas diminuta ATCC 11568] Length = 339 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-G 92 +DL A+ F P +++ AA V + + PE N G +I + ++ Sbjct: 62 LDLADRDGVAALFAEHKPRRVVHLAAQAGVRYSLEAPETYVDSNVVGFLSILEGCRAVEA 121 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTN 140 ++ ST VF P P + PL +Y +KLA E SY + Sbjct: 122 ANLVFASTSSVFGANRALPFSVRQPADHPLTVYAATKLANEAMAHSYAH 170 >gi|218134430|ref|ZP_03463234.1| hypothetical protein BACPEC_02333 [Bacteroides pectinophilus ATCC 43243] gi|217989815|gb|EEC55826.1| hypothetical protein BACPEC_02333 [Bacteroides pectinophilus ATCC 43243] Length = 314 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 18/146 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPDI----------DLLKPKDFASFF 46 MK LVIG G + L + D V + + + ++ D+L Sbjct: 1 MKALVIGGGGFVGTYLVNHLHDDLGYEVAVTKTSKENLKMADAQTYNLDVLNKDQIREVL 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----IPCIYISTDY 102 PD II+ AA ++V A P + +N +G+ + + + I +Y Sbjct: 61 TEVHPDYIIHLAAQSSVAFAWKNPTLTIDVNIKGSVNVLDVVRELDYKPRVLLIGSGEEY 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSK 128 TPI E + T P NIY +K Sbjct: 121 GHIREGETPIVEDNNTRPGNIYAATK 146 >gi|209548033|ref|YP_002279950.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533789|gb|ACI53724.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 316 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 27/205 (13%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G+ G + +L + +D +I R ++DL + ++ F + PD II AA Sbjct: 8 KIWVAGHRGMVGSALVRRLQSEDCSVITATRREVDLKRQEEVEKFVEANRPDAIILAAAK 67 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDE---- 114 A D P N I +AA G+ +++ + ++ L+ PI E Sbjct: 68 VGGILANDSYPAEFIYDNLIIEANIFEAAHQGGVDRLLFLGSSCIYPKLAPQPIPEEALL 127 Query: 115 ---FSPTNPLNIYGKSKLAG----EEKVASYTNNYVILRTAWVYSIFGSNF--------- 158 PTN Y +K+AG E Y +Y+ +Y G NF Sbjct: 128 TGALEPTN--EWYAIAKIAGIKLAEAYRKQYGRDYISAMPTNLYGP-GDNFDLNSSHVLP 184 Query: 159 -LLSMLRLAKERREISVVCDQFGTP 182 L+ AK R++ +V GTP Sbjct: 185 ALIRKAHAAKLRKDPHMVVWGTGTP 209 >gi|150006427|ref|YP_001301171.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] gi|149934851|gb|ABR41549.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus ATCC 8482] Length = 360 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R V D+ + PD I N AA + V + Sbjct: 40 NTGRIEHLYLDEWVRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVS 99 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP---CIY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 100 FDVPEYTAEADAVGTLRMLEAVRILGLEKKTKIYQASTSELFGLVQEVPQKETTPFYPRS 159 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 160 PYGVAKQYGFWITKNYRESY 179 >gi|117925698|ref|YP_866315.1| polysaccharide biosynthesis protein CapD [Magnetococcus sp. MC-1] gi|117609454|gb|ABK44909.1| polysaccharide biosynthesis protein CapD [Magnetococcus sp. MC-1] Length = 344 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 15/83 (18%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D +I+ AA V AE P N GA + +A+ + GI I +STD Sbjct: 92 DYVIHAAALKQVPTAEYNPMECIHTNVMGAENVVQASLANGIKRVIALSTD--------- 142 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 NP+N+YG SKLA ++ Sbjct: 143 -----KAANPINLYGASKLASDK 160 >gi|332184339|gb|AEE26593.1| UDP-glucose 4-epimerase [Francisella cf. novicida 3523] Length = 339 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DLL A F D +I+ A + AV ++ D+P + N +G + + + Sbjct: 59 LDLLDKHKLAKVFQEHDIDAVIHFAGFKAVGESVDKPLEYYHNNIQGTLNLLELMQEYQV 118 Query: 94 -PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 ++ S+ V+ ++ P E P + N YG +KL E+ + N Sbjct: 119 YNFVFSSSATVYGMNNKPPFTEDMPLSTTNPYGTTKLMLEDILRDLQN 166 >gi|326802349|ref|YP_004320168.1| NAD-dependent epimerase/dehydratase [Sphingobacterium sp. 21] gi|326553113|gb|ADZ81498.1| NAD-dependent epimerase/dehydratase [Sphingobacterium sp. 21] Length = 275 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 I+ ST +V+D S P E NP + Y SK+A E +++ N+ +LR +VY Sbjct: 108 IFASTSHVYDINSPHPGREDDALNPQHAYPASKVAAENELSESGLNWSVLRFPFVY 163 >gi|289549231|ref|YP_003474219.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484] gi|289182848|gb|ADC90092.1| dTDP-glucose 4,6-dehydratase [Thermocrinis albus DSM 14484] Length = 318 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 28/167 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD----------------------VEIIRVGRPDIDLLK 38 MK L+ G G I + V++ +E I R DI+ Sbjct: 1 MKLLITGGAGFIGSEFTRQAVKEGYQCVVVDKLTYAGDIRRLEEVLEKITFYRCDIN--- 57 Query: 39 PKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-I 96 ++F + S PDV+++ AA + VD++ +P F+ N G + A G+ I Sbjct: 58 NREFLEYIFSKEKPDVVVHWAAESHVDRSISDPSPFFTTNVLGTLNLLDTAKKYGVKSFI 117 Query: 97 YISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L E S P + Y SK + + +Y Y Sbjct: 118 NISTDEVYGELGDEGSFKEDSCLKPNSPYSVSKASADMLGRAYFRTY 164 >gi|225620454|ref|YP_002721711.1| UDP-glucose 4-epimerase [Brachyspira hyodysenteriae WA1] gi|225215273|gb|ACN84007.1| UDP-glucose 4-epimerase [Brachyspira hyodysenteriae WA1] Length = 330 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 20/124 (16%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP------EIAFSINAEGAGAIAK 86 D DLL F S D +++ AY V ++ P ++ SIN A AK Sbjct: 54 DSDLLD-----KIFKSHDIDSVMHLCAYIEVGESVQNPAKYYHNNVSNSINLLNAMLKAK 108 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NY 142 + I+ ST V+ P+ E P N YG SKLA E+ ++ YT NY Sbjct: 109 VKN-----FIFSSTAAVYGEPEAIPLKEDCRKEPTNPYGDSKLALEKILSWYTKAYDFNY 163 Query: 143 VILR 146 V LR Sbjct: 164 VALR 167 >gi|150010402|ref|YP_001305145.1| UDP-glucose 4-epimerase [Parabacteroides distasonis ATCC 8503] gi|149938826|gb|ABR45523.1| UDP-glucose 4-epimerase [Parabacteroides distasonis ATCC 8503] Length = 282 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 8/105 (7%) Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 K DF+SF DV+I+ A + ED ++ +SIN + I + A G+ I Sbjct: 41 KKTDFSSF------DVVIDVAGIAHIKITEDLRDLFYSINRDMTIDICQTARESGVKQFI 94 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++S+ V+ G + + + NP + YG SKL ++ + S ++ Sbjct: 95 FLSSMNVY-GDDCGIVTDKNNENPSSFYGDSKLQADKVIQSMNDD 138 >gi|145628207|ref|ZP_01784008.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 22.1-21] gi|148828056|ref|YP_001292809.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittGG] gi|144979982|gb|EDJ89641.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 22.1-21] gi|148719298|gb|ABR00426.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittGG] Length = 334 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ K S F + PD +++ AA + VD++ N G + + Sbjct: 51 RYAFEQIDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEV 110 Query: 88 ADS----------IGIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ LS E+SP +P + Y SK A + V Sbjct: 111 AKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLV 170 Query: 136 ASYTNNY 142 ++ Y Sbjct: 171 YAWHRTY 177 >gi|91226143|ref|ZP_01261033.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 12G01] gi|91189377|gb|EAS75655.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 12G01] Length = 338 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDG 106 S + + +I+ A AV ++ +P + N G + A G+ ++ S+ V+ Sbjct: 71 SHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMREAGVKSLVFSSSATVYGD 130 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + PI E PT+ N YG+SKL EE + + N Sbjct: 131 PASVPITEDFPTSATNPYGRSKLMVEECLTDFQN 164 >gi|15898538|ref|NP_343143.1| dTDP-glucose 4,6-dehydratase (rfbB-2) [Sulfolobus solfataricus P2] gi|13814979|gb|AAK41933.1| dTDP-Glucose 4,6-dehydratase (rfbB-2) [Sulfolobus solfataricus P2] Length = 350 Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 ++T VD++ +P+ S N G + +AA ++ISTD V+ DE S Sbjct: 103 SHTDVDRSIYKPQDFVSTNVFGTVNVLEAARRYNFKYVHISTDEVY---GEECSDENSSV 159 Query: 119 NPLNIYGKSKLAGEEKVASYTNNY 142 NP + Y SK + + V SY Y Sbjct: 160 NPSSPYSASKASADLFVKSYIKTY 183 >gi|303244003|ref|ZP_07330342.1| GDP-mannose 4,6-dehydratase [Methanothermococcus okinawensis IH1] gi|302485655|gb|EFL48580.1| GDP-mannose 4,6-dehydratase [Methanothermococcus okinawensis IH1] Length = 341 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 2/95 (2%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD--SIGIPCIYISTDYVFDGL 107 PD I + AA + V + P + +N G +A A S + +T ++ + Sbjct: 75 QPDEIYHLAAQSFVGFSFKNPRFTYDVNIGGTLNVANAVKEYSPSSKLYFAATSELYGKV 134 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 P E +P P + YG SKLAG + +Y +Y Sbjct: 135 QEIPQKETTPFYPRSPYGVSKLAGFWTIKNYRESY 169 >gi|254788156|ref|YP_003075585.1| dTDP-glucose 4,6-dehydratase [Teredinibacter turnerae T7901] gi|237683510|gb|ACR10774.1| dTDP-glucose 4,6-dehydratase [Teredinibacter turnerae T7901] Length = 356 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 13/134 (9%) Query: 20 CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 V+ VE R + DI L S D +++ AA + VD++ P+ N Sbjct: 48 AVESVENFRFVKGDI--LDQPLVEQLLRDNSVDTLVHFAAESHVDRSITGPDAFIETNIV 105 Query: 80 GAGAIAKAADSI---------GIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSK 128 G + KAA + G +ISTD V+ G + E +P P + Y SK Sbjct: 106 GTHTLLKAAKKVWLDEGLCKEGHRFHHISTDEVYGTLGPNDPAFSETTPYAPNSPYSASK 165 Query: 129 LAGEEKVASYTNNY 142 A + V SY + Y Sbjct: 166 AASDHLVRSYLHTY 179 >gi|168704624|ref|ZP_02736901.1| UDP-glucose 4-epimerase [Gemmata obscuriglobus UQM 2246] Length = 333 Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 16/158 (10%) Query: 1 MKCLVIGNNGQI-AQSLSSMCVQDVEII---------RVGRPDIDL----LKPKDFASFF 46 M+ LV G G I + ++ + E+ R PD++L L+ D Sbjct: 7 MRILVTGGAGYIGSHTVRQLLAGGHEVTVFDSLEYGHRRAVPDVNLVVGNLRDIDHVDNL 66 Query: 47 LSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 L + + +I+ AAY V ++ P ++ N + + G+ ++ ST + Sbjct: 67 LVVNRIEAVIHFAAYAYVGESVTSPAKYYTNNLIYSLQLLDRCRRNGVQKFVFSSTCATY 126 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 PI E +P P+N YG SKLA E +A Y Y Sbjct: 127 GVPDAVPIAETAPQRPVNPYGNSKLAFEHALADYAAAY 164 >gi|291550903|emb|CBL27165.1| dTDP-glucose 4,6-dehydratase [Ruminococcus torques L2-14] Length = 339 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 5/104 (4%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PDV++N AA + VD++ + P I N + A GI + +STD Sbjct: 68 KLFEEEHPDVVVNFAAESHVDRSIENPGIFLETNIMETQTLMDACRKYGIKRYHQVSTDE 127 Query: 103 VFDGLSRTPIDEF----SPTNPLNIYGKSKLAGEEKVASYTNNY 142 V+ L D F +P + + Y SK + V +Y Y Sbjct: 128 VYGDLPLDRPDLFFTEETPIHTSSPYSSSKAGADLLVLAYHRTY 171 >gi|84684394|ref|ZP_01012295.1| dTDP-glucose 4,6-dehydratase [Maritimibacter alkaliphilus HTCC2654] gi|84667373|gb|EAQ13842.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2654] Length = 346 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 9/101 (8%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--------GIPCIYISTDY 102 PD I++ AA + VD++ D P N G + +AA S +ISTD Sbjct: 73 PDAIMHLAAESHVDRSIDGPATFIETNVMGTFNLLEAARSYWDGQGRDPAFRFHHISTDE 132 Query: 103 VFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 VF L E SP +P + Y SK + + V ++ Y Sbjct: 133 VFGSLGPEGQFTEESPYDPRSPYSASKASSDHLVRAWHETY 173 >gi|319947718|ref|ZP_08021927.1| nucleoside-diphosphate-sugar epimerase [Dietzia cinnamea P4] gi|319438615|gb|EFV93526.1| nucleoside-diphosphate-sugar epimerase [Dietzia cinnamea P4] Length = 301 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 30/214 (14%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRP----------------DIDLLKPKDFA 43 MK ++G+ G I ++ + + + E+ V P ID LK Sbjct: 1 MKIAIVGSTGFIGSAVFTELQLTGHEVFAVRAPRVEPSAADTQSNIPEHQIDELK----- 55 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 L DV+IN A D +E + + F+ NA +A+A G+ + + V Sbjct: 56 --LLLAGADVVINCAGNP--DASETDEKALFASNAISPAIVARATYQAGVDRLIHVSSAV 111 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 G R +D+ T + Y +SK+ GE+ V + VI R S+ N ++++ Sbjct: 112 VQG-RRAVLDQSEETEAFSPYARSKVKGEQAVRNEFPTAVIYRPP---SVHARNRRVTLM 167 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 R ++ V P+ I I+H Sbjct: 168 TRRIARSPLATVAAPGTQPSPQTLIGNVASAISH 201 >gi|227488739|ref|ZP_03919055.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] gi|227091161|gb|EEI26473.1| UDP-glucose 4-epimerase [Corynebacterium glucuronolyticum ATCC 51867] Length = 325 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIR--------VGRPDIDLLKP--KDFASFFL 47 MK +V G G + +++ ++ DV I+ PD L++ +D L Sbjct: 1 MKLVVTGGAGYVGSVCTAVLIEAGHDVTIVDNFSTGNRDAVHPDAHLVEGDVRDVIDDVL 60 Query: 48 SF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 S S D +++ AA + V ++ ++P ++ N + A + + + S+ G Sbjct: 61 SADSYDGVLHFAARSLVGESVEKPAEYWNHNMVTTLTLLDAMVAHDVSSLVFSSTAATYG 120 Query: 107 LSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 T PI E PT P N YG +KLA + ++SY Y + T+ Y Sbjct: 121 EPETVPITEDFPTQPTNPYGATKLAIDYAISSYCTAYGLAATSLRY 166 >gi|197303887|ref|ZP_03168922.1| hypothetical protein RUMLAC_02625 [Ruminococcus lactaris ATCC 29176] gi|197297070|gb|EDY31635.1| hypothetical protein RUMLAC_02625 [Ruminococcus lactaris ATCC 29176] Length = 317 Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F PD+I+N AA + VD++ + P I N G + A GI + +STD Sbjct: 49 QLFEEEQPDIIVNFAAESHVDRSIENPGIFLETNIMGTAVLMDACRKYGITRYHQVSTDE 108 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ P++ Sbjct: 109 VYGDL---PLDRPDLFFTEETPIH 129 >gi|294777052|ref|ZP_06742510.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] gi|294449110|gb|EFG17652.1| GDP-mannose 4,6-dehydratase [Bacteroides vulgatus PC510] Length = 360 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R V D+ + PD I N AA + V + Sbjct: 40 NTGRIEHLYLDEWVRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVS 99 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP---CIY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 100 FDVPEYTAEADAVGTLRMLEAVRILGLEKKTKIYQASTSELFGLVQEVPQKETTPFYPRS 159 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 160 PYGVAKQYGFWITKNYRESY 179 >gi|269966796|ref|ZP_06180870.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 40B] gi|269828614|gb|EEZ82874.1| UDP-glucose 4-epimerase [Vibrio alginolyticus 40B] Length = 338 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDG 106 S + + +I+ A AV ++ +P + N G + A G+ ++ S+ V+ Sbjct: 71 SHNIEAVIHFAGLKAVGESVAKPLEYYDNNVNGTLVLVDAMREAGVKSLVFSSSATVYGD 130 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 + PI E PT+ N YG+SKL EE + + N Sbjct: 131 PASVPITEDFPTSATNPYGRSKLMVEECLTDFQN 164 >gi|227357175|ref|ZP_03841544.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis ATCC 29906] gi|227162707|gb|EEI47674.1| dTDP-D-glucose-4,6-dehydratase [Proteus mirabilis ATCC 29906] Length = 357 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 14/128 (10%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R +D+ S F + PD++++ AA + VD++ D P N G + +A Sbjct: 54 RYAFEQVDICDRATLDSLFAQYQPDIVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEA 113 Query: 88 ADSI----------GIPCIYISTDYVFDGLSRTPIDEFSPTN---PLNIYGKSKLAGEEK 134 A +ISTD V+ L T D F+ T P + Y SK + + Sbjct: 114 ARHFWSVLPEDKKAAFRFHHISTDEVYGDLEGTD-DFFTETTSYAPSSPYSASKASSDHL 172 Query: 135 VASYTNNY 142 V ++ Y Sbjct: 173 VRAWLRTY 180 >gi|113954542|ref|YP_729467.1| UDP-glucose 4-epimerase [Synechococcus sp. CC9311] gi|113881893|gb|ABI46851.1| UDP-glucose 4-epimerase [Synechococcus sp. CC9311] Length = 370 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRT 110 + +I+ A AV ++ +P + +N G+ + A D + S+ G + Sbjct: 95 EAVIHFAGLKAVGESVQQPLRYWDVNVVGSQRLLSAMDRHSCRTLVFSSSATLYGYPDQV 154 Query: 111 PIDEFSPTNPLNIYGKSKLAGE 132 PI E +P P+N YG SK A E Sbjct: 155 PIPETAPIQPINPYGASKQAAE 176 >gi|15241503|ref|NP_199261.1| DUR (DEFECTIVE UGE IN ROOT); UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme binding [Arabidopsis thaliana] gi|75309104|sp|Q9FI17|ARAE4_ARATH RecName: Full=Putative UDP-arabinose 4-epimerase 4; AltName: Full=UDP-D-xylose 4-epimerase 4 gi|9758701|dbj|BAB09155.1| unnamed protein product [Arabidopsis thaliana] gi|332007730|gb|AED95113.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana] Length = 436 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGI 93 DL P F + D +++ AA V ++ P + +I + G + A Sbjct: 154 DLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVK 213 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAW 149 IY ST + + PI E +P P+N YGK+K E+ + ++ N +ILR Sbjct: 214 KLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILR--- 270 Query: 150 VYSIFGSN 157 +++ GS+ Sbjct: 271 YFNVIGSD 278 >gi|145629948|ref|ZP_01785730.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae R3021] gi|145632245|ref|ZP_01787980.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 3655] gi|145634035|ref|ZP_01789746.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittAA] gi|145636997|ref|ZP_01792661.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittHH] gi|145638308|ref|ZP_01793918.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittII] gi|148826482|ref|YP_001291235.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittEE] gi|229844752|ref|ZP_04464891.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 6P18H1] gi|319775194|ref|YP_004137682.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae F3047] gi|329122884|ref|ZP_08251455.1| dTDP-glucose 4,6-dehydratase [Haemophilus aegyptius ATCC 11116] gi|144984229|gb|EDJ91652.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae R3021] gi|144987152|gb|EDJ93682.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 3655] gi|145268479|gb|EDK08472.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittAA] gi|145269855|gb|EDK09794.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittHH] gi|145272637|gb|EDK12544.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittII] gi|148716642|gb|ABQ98852.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae PittEE] gi|229812466|gb|EEP48156.1| dTDP-glucose 46-dehydratase [Haemophilus influenzae 6P18H1] gi|309751459|gb|ADO81443.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R2866] gi|317449785|emb|CBY85992.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae F3047] gi|327471815|gb|EGF17255.1| dTDP-glucose 4,6-dehydratase [Haemophilus aegyptius ATCC 11116] Length = 334 Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ K S F + PD +++ AA + VD++ N G + + Sbjct: 51 RYAFEQIDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEV 110 Query: 88 ADS----------IGIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ LS E+SP +P + Y SK A + V Sbjct: 111 AKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLV 170 Query: 136 ASYTNNY 142 ++ Y Sbjct: 171 YAWHRTY 177 >gi|330718532|ref|ZP_08313132.1| UDP-galactose 4-epimerase [Leuconostoc fallax KCTC 3537] Length = 329 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 21/155 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG----------RPD-----IDLLKPKDFAS 44 M LV+G G I + ++D E++ V PD +D+ Sbjct: 1 MAVLVLGGAGYIGSHMVKRLIEDEREVVVVDNLVTGHRQAVHPDAKFYEVDVRDKAALNQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSIGIPCIYISTD 101 F + + +++ AA++ V ++ P F N G + KA D I ++ ST Sbjct: 61 VFDQENIEAVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKAHDVKQI--VFSSTA 118 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 + PI E P P+N YG+SKL E+ +A Sbjct: 119 ATYGNPVNIPIKETDPQQPINPYGESKLMMEKIMA 153 >gi|302874842|ref|YP_003843475.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307690538|ref|ZP_07632984.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302577699|gb|ADL51711.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 312 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 7/133 (5%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 I +L++ + +++ ++ P+I ++ + F++ D+ + AA V + Sbjct: 29 ILDNLANSSIDNIKDLQFNYPNITFIEGSIMDTNLLETLFIN-KFDICYHLAASINVQDS 87 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPIDEFSPTNPLNIYG 125 D+P+ F + G + + +Y+ST V+ L+ I E PT P + Y Sbjct: 88 IDDPKTTFENDVIGTFNVLQQCKINNTKFVYMSTCMVYSKALNIEGISESHPTCPASPYA 147 Query: 126 KSKLAGEEKVASY 138 +KLAGE SY Sbjct: 148 AAKLAGENLALSY 160 >gi|269797732|ref|YP_003311632.1| polysaccharide biosynthesis protein CapD [Veillonella parvula DSM 2008] gi|269094361|gb|ACZ24352.1| polysaccharide biosynthesis protein CapD [Veillonella parvula DSM 2008] Length = 608 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ F +++PDV+ + AA+ V E +P A N G +A A + G+ Sbjct: 340 DIRDKNQLEQIFKNYNPDVVFHAAAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVD 399 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ISTD NP ++ G +K E+ V + Y Sbjct: 400 RFVMISTD--------------KAVNPTSVMGATKRVAEKVVLGMNHTY 434 >gi|90417232|ref|ZP_01225159.1| polysaccharide biosynthesis protein [marine gamma proteobacterium HTCC2207] gi|90331008|gb|EAS46269.1| polysaccharide biosynthesis protein [marine gamma proteobacterium HTCC2207] Length = 337 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDYVFDGLSRT 110 DVII+ AA VD AE P N +GA + AA G+ + +STD Sbjct: 80 DVIIHAAAIKQVDTAEYNPTECIRTNIDGAENVIHAALDCGVKSVVALSTD--------- 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 P+N+YG +KL +K+ + NN Sbjct: 131 -----KACAPINLYGATKLV-SDKLFTAANN 155 >gi|27382689|ref|NP_774218.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum USDA 110] gi|2921560|gb|AAC04827.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum] gi|27355861|dbj|BAC52843.1| UDP-glucose 4'-epimerase [Bradyrhizobium japonicum USDA 110] Length = 330 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL A F +++ AA + V ++ +P+ + N +G ++ +A + G Sbjct: 53 DLLDDAALARAFADHKVTAVMHFAAASLVGESMTDPQKYYINNVQGTLSLLQAMRNAGCH 112 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 ++ ST V+ + E P P+N YG SK E +A Y Y Sbjct: 113 RIVFSSTGAVYGNADSKELPEDFPCAPINPYGASKWMIERMLADYRAAY 161 >gi|116618170|ref|YP_818541.1| UDP-galactose 4-epimerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097017|gb|ABJ62168.1| UDP-galactose 4-epimerase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 334 Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 22/160 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 M LV+G G I + V+ V+ + G +D+ + ++ Sbjct: 1 MAVLVLGGAGYIGSHMVKRLVEAGRDVVVVDALFTGHRAAVNPAATFYQVDIRDKAELSA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSIGIPCIYISTD 101 F + + +++ AA++ V ++ P F N G + KA D I ++ ST Sbjct: 61 VFDKENIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKAHDVKQI--VFSSTA 118 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 + PI E P NP+N YG+SKL EK+ ++++ Sbjct: 119 ATYGNPVHIPIKETDPQNPINPYGESKLM-MEKIMNWSDQ 157 >gi|253578771|ref|ZP_04856042.1| GDP-mannose 4,6-dehydratase [Ruminococcus sp. 5_1_39B_FAA] gi|251849714|gb|EES77673.1| GDP-mannose 4,6-dehydratase [Ruminococcus sp. 5_1_39BFAA] Length = 350 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 9/146 (6%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D DL PD I N AA + V + D PE + ++A G + +A G Sbjct: 57 DGDLSDSSGLIRLVGEIRPDEIYNLAAQSHVQVSFDAPEYSGDVDALGVLRVLEAVRVCG 116 Query: 93 I----PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA 148 + ST ++ + P E +P +P + Y +K G V Y + Y + Sbjct: 117 LTKTCKVYQASTSELYGKVEEVPQKETTPFHPYSPYAVAKQYGFWMVKEYRDAYGMFAVN 176 Query: 149 WVY-----SIFGSNFLLSMLRLAKER 169 + G NF+ + LA R Sbjct: 177 GILFNHESERRGENFVTRKITLAAGR 202 >gi|126741093|ref|ZP_01756775.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6] gi|126717857|gb|EBA14577.1| dTDP-glucose 4,6-dehydratase [Roseobacter sp. SK209-2-6] Length = 350 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 11/108 (10%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--------IY 97 F PDV+++ AA + VD++ D P N G + +AA I + Sbjct: 68 FSDHKPDVVMHLAAESHVDRSIDGPGDFIETNITGTFNMLEAARKHWIEAGRPEAFRFHH 127 Query: 98 ISTDYVFDGLSRTPIDEFSPT---NPLNIYGKSKLAGEEKVASYTNNY 142 ISTD V+ L P +F+ +P + Y SK A + V ++ Y Sbjct: 128 ISTDEVYGSLPNDPEVQFTEETSYDPRSPYSASKAASDHLVRAWAETY 175 >gi|20560125|gb|AAM27864.1|AF498419_18 ORF_18; similar to 3-beta hydroxysteroid dehydrogenase/i [Pseudomonas aeruginosa] Length = 316 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEK 134 N E +AKAA G + +G S R P+DE SP NP Y SK E+ Sbjct: 90 NCEATVRLAKAALIDGAQRFVFVSSIGVNGASSGRLPLDESSPANPHTDYAVSKWEAEQA 149 Query: 135 VASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 + + V++R VY +LRL + R + P A+ R Sbjct: 150 LHRLLDGREMALVVVRPPMVYDTDAPGNFARLLRLVSKGRVL---------PLGAIDNHR 200 Query: 191 AIIQIAHNLIE-----NSDTSLRGIFHMTADGGPVSWADFAEYI 229 +I+ + NL+ S G +DG VS ++ Y+ Sbjct: 201 SIVSL-RNLVHFLQLCGEHPSAPGHILFPSDGEDVSTSEIIAYL 243 >gi|86261648|emb|CAI47661.1| putative epimerase/dehydratase [Streptoalloteichus hindustanus] Length = 345 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 6/107 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 DV+++ AA + PE+ S+N E + + + G+ +Y S+ V+ G+S + Sbjct: 75 DVVVHLAAVANDPSFDLNPELGRSVNFECLDHVMRLSKEAGVRRFVYASSASVY-GISDS 133 Query: 111 P-IDEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSI 153 P +DE P P+ Y + K GEE + T+ V LR A V + Sbjct: 134 PEVDESHPLVPITDYNRYKALGEEILFPLTDTSFETVALRAATVCGV 180 >gi|68643794|emb|CAI33990.1| putative epimerase [Streptococcus pneumoniae] gi|68644310|emb|CAI34414.1| putative epimerase [Streptococcus pneumoniae] gi|89994614|emb|CAJ84827.1| putative epimerase [Streptococcus pneumoniae] Length = 360 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA----KAA 88 D DL++ F ++ P +++N AA V + P++ N G I K Sbjct: 81 DSDLME-----EIFETYRPQIVVNLAAQAGVRYSITNPDVYMKSNIIGFHTILEKCRKYQ 135 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRT 147 ++I +Y S+ V+ G ++ P E NP+++Y +K E + +Y+ Y I T Sbjct: 136 ENIE-HLVYASSSSVYGGNTKIPFSELDAVDNPVSLYAVTKKTNELEAHAYSKLYNIPTT 194 Query: 148 AW-VYSIFG 155 ++++G Sbjct: 195 GLRFFTVYG 203 >gi|172058580|ref|YP_001815040.1| polysaccharide biosynthesis protein CapD [Exiguobacterium sibiricum 255-15] gi|171991101|gb|ACB62023.1| polysaccharide biosynthesis protein CapD [Exiguobacterium sibiricum 255-15] Length = 623 Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 15/94 (15%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGL 107 F PD++ + AA+ V ED P A N G +A AA++ G+ + ISTD Sbjct: 361 FKPDLVYHAAAHKHVPLMEDNPSEAVKNNIYGTRNVALAAEAAGVNRFVMISTD------ 414 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 NP ++ G +K E + N Sbjct: 415 --------KAVNPTSVMGATKRIAEMVIQQIARN 440 >gi|322700334|gb|EFY92090.1| UDP-glucose 4-epimerase Gal10 [Metarhizium acridum CQMa 102] Length = 377 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 9/121 (7%) Query: 17 SSMCVQDVEIIRVGRP---DIDLLKPKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEI 72 S + + +E + RP +D+ K F S D +I+ AA AV ++ + P Sbjct: 40 SEVALDRIEKLCGRRPVFYKVDITDEKALDDVFAKHPSIDSVIHFAALKAVGESGEIPLE 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G+ A+ ++ + + I + S+ V+ +R PI E PT P N YG++ Sbjct: 100 YYRVNVGGSIALLRSMERNNVTNIVFSSSATVYGDATRFPNMIPIPEHCPTGPTNTYGRT 159 Query: 128 K 128 K Sbjct: 160 K 160 >gi|293401740|ref|ZP_06645881.1| dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304692|gb|EFE45940.1| dTDP-glucose 4,6-dehydratase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 352 Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 11/119 (9%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--- 91 D+ F ++ D ++N AA + VD++ PEI N G + K A Sbjct: 60 DICDEAKITQLFETYDIDYVVNFAAESHVDRSILHPEIFVETNVNGTVNLLKIAKKYWEI 119 Query: 92 -------GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ + +STD V+ L E +P P + Y SK + + V ++ + Y Sbjct: 120 GDDTYKDGVKYLQVSTDEVYGSLGDEGYFTEETPICPHSPYSASKASADLFVKAFADTY 178 >gi|332297027|ref|YP_004438949.1| dTDP-glucose 4,6-dehydratase [Treponema brennaborense DSM 12168] gi|332180130|gb|AEE15818.1| dTDP-glucose 4,6-dehydratase [Treponema brennaborense DSM 12168] Length = 395 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 22/116 (18%) Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA--------------GAIAKAADSI--- 91 + D I++ AA + VD++ PE N G GA A D I Sbjct: 100 YDVDTIVHFAAESHVDRSISGPEAFIRTNVTGTFTLLDAARNFWKKDGAQTAAGDKISSG 159 Query: 92 ----GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 G+ +ISTD V+ L T E +P +P + Y SK + + V +Y + Y Sbjct: 160 PFRDGVLFHHISTDEVYGSLGETGYFTETTPYDPRSPYSASKASSDHLVMAYFHTY 215 >gi|315639035|ref|ZP_07894205.1| UDP-glucose 4-epimerase [Campylobacter upsaliensis JV21] gi|315480947|gb|EFU71581.1| UDP-glucose 4-epimerase [Campylobacter upsaliensis JV21] Length = 332 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 60/158 (37%), Gaps = 35/158 (22%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF----------------- 46 L+ G G ++ + + +Q+ + ++ D LK + AS F Sbjct: 8 LITGGTGSFGKTYTKVLLQNYKPKKIIIYSRDELKQFEMASVFNAPCMRYFIGDVRDKER 67 Query: 47 ---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + D II+ AA V AE P N GA + A G+ CI +STD Sbjct: 68 LKKATKDVDFIIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENGVKKCIALSTD- 126 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 NP+N+YG +KLA ++ + N Sbjct: 127 -------------KACNPVNLYGATKLASDKLFVAANN 151 >gi|308274095|emb|CBX30694.1| dTDP-glucose 4,6-dehydratase [uncultured Desulfobacterium sp.] Length = 352 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + F +F D I + AA + VD++ P N EG + + A Sbjct: 63 DICNLSELTGLFETFEIDAICHFAAESHVDRSITNPGDFIHSNIEGTFCLLELARQNKNK 122 Query: 95 C---IYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 ++STD VF L ++ E +P NP + Y SK + + + +Y+ Y + Sbjct: 123 LELFHHVSTDEVFGSLGKSGYFTETTPYNPSSPYSASKASSDHLIRAYSVTYGV 176 >gi|308070559|ref|YP_003872164.1| hypothetical protein PPE_03828 [Paenibacillus polymyxa E681] gi|305859838|gb|ADM71626.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 328 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 22/112 (19%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRT 110 D I + AA V ED+P A N G + +AA + + IYISTD Sbjct: 75 DYIFHLAALKHVPVCEDQPYEALKTNVVGTQNVIEAAVANQVKKVIYISTD--------- 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN------NYVILRTAWVYSIFGS 156 NP N YG +K G EK+ Y N +V +R V GS Sbjct: 126 -----KAANPSNFYGMTKAIG-EKLIVYANLLNSDTRFVTVRGGNVLGTNGS 171 >gi|302038296|ref|YP_003798618.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] gi|300606360|emb|CBK42693.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] Length = 332 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 7/114 (6%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +I+ AA V + E IN +G + A I ++ S+ V+ PI Sbjct: 72 VIHLAALLGVRRTEVNRLRCLEINVDGTKRVLDCAIQHRIKRLVFASSSEVYGEPIENPI 131 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSIF-GSNFLL 160 E + T +Y SKLAGEE Y Y VILR Y + + F+L Sbjct: 132 TEETITQGKTVYAVSKLAGEELCIGYAQRYPEFEHVILRFFNAYGPYQAAQFVL 185 >gi|294791640|ref|ZP_06756788.1| capsular polysaccharide biosynthesis protein Cap5D [Veillonella sp. 6_1_27] gi|294456870|gb|EFG25232.1| capsular polysaccharide biosynthesis protein Cap5D [Veillonella sp. 6_1_27] Length = 608 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 15/109 (13%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ F +++PDV+ + AA+ V E +P A N G +A A + G+ Sbjct: 340 DIRDKNQLEQIFKNYNPDVVFHAAAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVD 399 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + ISTD NP ++ G +K E+ V + Y Sbjct: 400 RFVMISTD--------------KAVNPTSVMGATKRVAEKVVLGMNHTY 434 >gi|224499834|ref|ZP_03668183.1| UDP-glucose 4-epimerase [Listeria monocytogenes Finland 1988] gi|254831100|ref|ZP_05235755.1| UDP-glucose 4-epimerase [Listeria monocytogenes 10403S] Length = 327 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +S F D +I+ AA + V ++ + P + N G + + + + I S+ Sbjct: 58 LSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSS 117 Query: 102 YVFDGL-SRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFG- 155 G R PI E PTNP + YG++KL E+ + +Y +V LR +++ G Sbjct: 118 AATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALR---YFNVAGA 174 Query: 156 -------------SNFLLSMLRLAKERRE-ISVVCDQFGTP 182 S+ + +L++A +RE +++ D + TP Sbjct: 175 KADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDGYNTP 215 >gi|161527629|ref|YP_001581455.1| polysaccharide biosynthesis protein CapD [Nitrosopumilus maritimus SCM1] gi|160338930|gb|ABX12017.1| polysaccharide biosynthesis protein CapD [Nitrosopumilus maritimus SCM1] Length = 335 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 15/87 (17%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D+I + AA VD+ E P ++N G +AKAA + + I ISTD Sbjct: 79 DIIFHAAALKHVDRCELYPLETMTVNIIGTNNVAKAAVNANVSKVISISTD--------- 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVAS 137 NP+ + G +KL E+ +A+ Sbjct: 130 -----KAVNPIGVMGATKLLAEKLIAA 151 >gi|156743370|ref|YP_001433499.1| dTDP-glucose 4,6-dehydratase [Roseiflexus castenholzii DSM 13941] gi|156234698|gb|ABU59481.1| dTDP-glucose 4,6-dehydratase [Roseiflexus castenholzii DSM 13941] Length = 337 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD----G 106 D ++N AA T VD++ +P+ + G + +A + + +++STD V+ G Sbjct: 77 DTLVNFAAETHVDRSIMDPDAFIRTDVYGTYVLLEAVKEMKLERALFVSTDEVYGHIEPG 136 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 S + D P +P Y SK GE V +Y Y Sbjct: 137 HSSSEDDPLKPRSP---YAASKAGGEHLVYAYYITY 169 >gi|186477070|ref|YP_001858540.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] gi|184193529|gb|ACC71494.1| dTDP-glucose 4,6-dehydratase [Burkholderia phymatum STM815] Length = 353 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 12/120 (10%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA------ 88 D+ + F P +++ AA + VD++ P N G + +AA Sbjct: 57 DICDRETLDKLFAEHKPRAVLHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARSYWNT 116 Query: 89 ----DSIGIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D +++STD VF LS T E +P P + Y +K + V +Y + Y Sbjct: 117 LNAADKAAFRFLHVSTDEVFGSLSATDPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTY 176 >gi|328874208|gb|EGG22574.1| UDP-glucose 4-epimerase [Dictyostelium fasciculatum] Length = 345 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 + D+L K F + +I+ A AV ++ P + N G + K + Sbjct: 61 ECDILDEKGLEEIFETRPITKVIHFAGLKAVGESSSVPLKYYENNITGTLVLLKVMNKFN 120 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEE 133 I S+ G ++T PI E SP + N YGK+KL EE Sbjct: 121 CKNIVFSSSATVYGDAKTVPIQEDSPLSATNPYGKTKLYIEE 162 >gi|297794961|ref|XP_002865365.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311200|gb|EFH41624.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 412 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGI 93 DL P F + D +++ AA V ++ P + +I + G + A Sbjct: 130 DLGDPIAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVK 189 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAW 149 IY ST + + PI E +P P+N YGK+K E+ + ++ N +ILR Sbjct: 190 KLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILR--- 246 Query: 150 VYSIFGSN 157 +++ GS+ Sbjct: 247 YFNVIGSD 254 >gi|254881656|ref|ZP_05254366.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|319643041|ref|ZP_07997674.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] gi|254834449|gb|EET14758.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 4_3_47FAA] gi|317385322|gb|EFV66268.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_40A] Length = 360 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R V D+ + PD I N AA + V + Sbjct: 40 NTGRIEHLYLDEWVRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVS 99 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP---CIY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 100 FDVPEYTAEADAVGTLRMLEAVRILGLEKKTKIYQASTSELFGLVQEVPQKETTPFYPRS 159 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 160 PYGVAKQYGFWITKNYRESY 179 >gi|194364273|ref|YP_002026883.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia R551-3] gi|194347077|gb|ACF50200.1| UDP-glucose 4-epimerase [Stenotrophomonas maltophilia R551-3] Length = 336 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 FL P+ +++ AA AV ++ P + +N G + + ++ S+ V+ Sbjct: 69 FLQQRPEAVMHFAALKAVGESAVVPLAYYDVNVAGTINLLQCMQRNACHKLVFSSSATVY 128 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 S PI+E +PT+ + YG++KL E+ Sbjct: 129 GNSSHCPINEGAPTSATSPYGRTKLFVEQ 157 >gi|114327802|ref|YP_744959.1| NAD-dependent epimerase/dehydratase family protein [Granulibacter bethesdensis CGDNIH1] gi|114315976|gb|ABI62036.1| NAD dependent epimerase/dehydratase family [Granulibacter bethesdensis CGDNIH1] Length = 332 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%) Query: 15 SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF 74 +++++ D+ ++R + DL L D I N A T A+ +P Sbjct: 54 NMANLSSLDITLVRASLEEADL--------HTLCEGADFIFNLAGQTGHLAAQLDPFADL 105 Query: 75 SINAEGAGAIAKAADSI--GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 ++NA + A + G ++ ST + P+DE + P + G SKLAGE Sbjct: 106 AVNAMAQLRLIAAVRDVAPGAVIVHASTRQCYGRTGGAPVDESHVSAPQDFNGVSKLAGE 165 Query: 133 E 133 + Sbjct: 166 Q 166 >gi|57242472|ref|ZP_00370410.1| polysaccharide biosynthesis protein [Campylobacter upsaliensis RM3195] gi|57016757|gb|EAL53540.1| polysaccharide biosynthesis protein [Campylobacter upsaliensis RM3195] Length = 332 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 35/158 (22%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF----------------- 46 L+ G G ++ + + +Q+ + ++ D LK + AS F Sbjct: 8 LITGGTGSFGKTYTKVLLQNYKPKKIIIYSRDELKQFEMASLFNAPCMRYFIGDVRDKER 67 Query: 47 ---LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + D +I+ AA V AE P N GA + A G+ CI +STD Sbjct: 68 LKKATKDVDFVIHAAAMKHVPIAEYNPMECIKTNIHGAQNVIDACFENGVKKCIALSTD- 126 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 NP+N+YG +KLA ++ + N Sbjct: 127 -------------KACNPVNLYGATKLASDKLFVAANN 151 >gi|113477688|ref|YP_723749.1| UDP-galactose 4-epimerase [Trichodesmium erythraeum IMS101] gi|110168736|gb|ABG53276.1| UDP-galactose 4-epimerase [Trichodesmium erythraeum IMS101] Length = 333 Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEG 80 V VE+I D LL K FA+ ++ +++ AAY V ++ +P+ + N G Sbjct: 49 VLKVEMIVGDTSDRSLLD-KIFATHNIA----AVMHFAAYIFVGESVKDPQKYYHNNVVG 103 Query: 81 AGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + +A I ++ ST ++ PI E P NP+N YG SK E+ +A + Sbjct: 104 TLTLLEAMLKASIKKFVFSSTAAIYGKPQTIPIPEDHPKNPINPYGASKRMIEQILADFE 163 Query: 140 NNY 142 Y Sbjct: 164 IAY 166 >gi|332884210|gb|EGK04478.1| hypothetical protein HMPREF9456_00805 [Dysgonomonas mossii DSM 22836] Length = 337 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 6/120 (5%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF---DGLS 108 D +++ A T A+D +I F A A+ + D++ I +S+ F D + Sbjct: 76 DYVVHNAGVTKCLDAKDFDKINFRYTANLIDAL-REVDAVPDKFILMSSLSAFGVGDEEN 134 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAK 167 TPI NP YGKSKL E + S + YVILR VY ++ L M++ K Sbjct: 135 YTPIKITDTPNPNTAYGKSKLKAECYLRSMDDFPYVILRPTGVYGPREKDYFL-MIKTVK 193 >gi|325959808|ref|YP_004291274.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] gi|325331240|gb|ADZ10302.1| UDP-glucose 4-epimerase [Methanobacterium sp. AL-21] Length = 325 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 20/163 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASFFLS 48 L++G G I ++ M ++ + + G D DL + F Sbjct: 3 LIVGGAGYIGSHINKMLSENGYETVVFDNLSYGHEDFVKWGHFERGDLGNIESIRKVFKK 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGL 107 ++ D +++ AA+ V ++ +P+ + N + + + ++ ST + Sbjct: 63 YTIDSVMHFAAFAYVGESVVDPQKYYRNNVLNTLNLLQVMLEFDVKRLVFSSTCATYGNP 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILR 146 PI E P NP+N YG+ KL E + Y+ NYV LR Sbjct: 123 VEIPITENHPQNPINPYGRGKLMVETVLDDYSRAYDLNYVSLR 165 >gi|296876728|ref|ZP_06900776.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] gi|296432230|gb|EFH18029.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] Length = 338 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 6/122 (4%) Query: 17 SSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 S +Q+VE I +G+ DID+ F+ P +I+ AA AV ++ P Sbjct: 39 SKKSIQEVEKI-IGKSITLYDIDIRDKDKLLEVFVKEQPTGVIHFAALKAVGESVQIPLT 97 Query: 73 AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAG 131 + N G + + + + I S+ G T PI E P + N YG++KL Sbjct: 98 YYENNIIGTLTLLRVMEKVQCKNIIFSSSATVYGDPHTVPILEDFPLSVTNPYGRTKLMI 157 Query: 132 EE 133 EE Sbjct: 158 EE 159 >gi|115401328|ref|XP_001216252.1| UDP-glucose 4-epimerase [Aspergillus terreus NIH2624] gi|114190193|gb|EAU31893.1| UDP-glucose 4-epimerase [Aspergillus terreus NIH2624] Length = 371 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS--PDV--IINPAAYTAVDKAEDEPEI 72 S ++ +E+I +P+ L D +F F PD+ +I+ AA AV ++ ++P Sbjct: 40 SDEALRRIELISGKKPEFAQLDVTDEKAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLD 99 Query: 73 AFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDGLSR----TPIDEFSPTNPLNIYGKS 127 + +N G + ++ + I + S+ V+ +R PI E P P N YG + Sbjct: 100 YYMVNVYGTLCLLRSMVRHNVTNIVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGNT 159 Query: 128 KLAGEEKVASYTN 140 K A E + N Sbjct: 160 KFAVETAITDVIN 172 >gi|111225600|ref|YP_716394.1| epimerase/dehydratase [Frankia alni ACN14a] gi|111153132|emb|CAJ64879.1| epimerase/dehydratase [Frankia alni ACN14a] Length = 340 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 21/152 (13%) Query: 70 PEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSK 128 P++ + +N G+ +A A G+ +Y+S+ V+ + + E SP NP Y + K Sbjct: 83 PDVTYKVNHLGSVRLANLAKQAGVERFVYMSSCSVYGVATGEDVTETSPVNPQTPYAECK 142 Query: 129 LAGEEKVASYTNNY---VILRTAWVYSIFGSN----FLLSMLRLAKERREISVVCDQFGT 181 + E VA ++ LR A Y L ++ +A EI++ D GT Sbjct: 143 VYVERDVAPLADDSFSPTFLRNATAYGASPRQRFDIVLNNLAGVAWTTGEIAMTSD--GT 200 Query: 182 P----TSALQIARAI-------IQIAHNLIEN 202 P L IA+AI + HN I N Sbjct: 201 PWRPLVHGLDIAKAIRLALAAPRDVVHNQIFN 232 >gi|94497382|ref|ZP_01303953.1| UDP-glucose 4-epimerase [Sphingomonas sp. SKA58] gi|94423245|gb|EAT08275.1| UDP-glucose 4-epimerase [Sphingomonas sp. SKA58] Length = 332 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 17/146 (11%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVFDGLSRTPI 112 I++ A V ++ D P + N+ + ++A +G+P I+ ST + + Sbjct: 74 IMHFAGSVVVPESVDNPLKYYHNNSAKTRDLIESAVRVGVPHFIFSSTAATYGTPDVEAV 133 Query: 113 DEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWV----------YSIFGSNF 158 E +P P+N YG SKL E + A++ N+ LR V S G+ Sbjct: 134 REDTPQRPINPYGMSKLMTEHMLRDVAAAHPMNFCALRYFNVAGADPQGRTGQSTAGATH 193 Query: 159 LLSMLRLAK--ERREISVVCDQFGTP 182 L+ + A +R +S+ D F TP Sbjct: 194 LIKVAVEAALGKRESVSIFGDDFDTP 219 >gi|309973630|gb|ADO96831.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae R2846] Length = 334 Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ K S F + PD +++ AA + VD++ N G + + Sbjct: 51 RYAFEQIDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEV 110 Query: 88 ADSIGIPC----------IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ LS E+SP +P + Y SK A + V Sbjct: 111 AKNYWYTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLV 170 Query: 136 ASYTNNY 142 ++ Y Sbjct: 171 YAWHRTY 177 >gi|302866601|ref|YP_003835238.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] gi|302569460|gb|ADL45662.1| NAD-dependent epimerase/dehydratase [Micromonospora aurantiaca ATCC 27029] Length = 321 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 +++ A +V ++ D+P + NA G + AA G+P C+ S+ V+ P Sbjct: 71 VVHLGALGSVPRSIDDPLRSHHANATGTLTVLDAAHRNGVPQCVLASSSSVYGANPVLPR 130 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 E P++ Y SKLA E ++ N Y Sbjct: 131 QEGLRPMPVSPYAVSKLATEAYGIAFANCY 160 >gi|291296406|ref|YP_003507804.1| dTDP-glucose 4,6-dehydratase [Meiothermus ruber DSM 1279] gi|290471365|gb|ADD28784.1| dTDP-glucose 4,6-dehydratase [Meiothermus ruber DSM 1279] Length = 342 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 9/93 (9%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRT 110 D ++N AA + VD++ + N EG + +AA G+ + +STD V+ LS T Sbjct: 81 DAVLNFAAESHVDRSLLDARAFVRTNIEGTLVLLEAARQAGVRRFLQVSTDEVYGDLSGT 140 Query: 111 -----PIDEFSPTNPLNIYGKSKLAGEEKVASY 138 D F P +P Y SK E V +Y Sbjct: 141 DRHSLETDPFRPRSP---YAASKAGAEHLVLAY 170 >gi|148238450|ref|YP_001223837.1| GDP-mannose 4,6-dehydratase [Synechococcus sp. WH 7803] gi|147846989|emb|CAK22540.1| GDP-mannose 4,6-dehydratase [Synechococcus sp. WH 7803] Length = 363 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + PD I N A + V + + PE + +A G I +A +G+ Sbjct: 64 DLTDSSNLIRIIQDVQPDEIYNLGAQSHVAVSFESPEYTANCDALGTLRILEAVRLLGLT 123 Query: 95 ---CIY-ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 IY ST ++ + TP E +P P + YG +KL G +Y Y Sbjct: 124 ERTRIYQASTSELYGLVQETPQRETTPFYPRSPYGVAKLYGYWITVNYREAY 175 >gi|32034492|ref|ZP_00134664.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208936|ref|YP_001054161.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae L20] gi|307257541|ref|ZP_07539305.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|126097728|gb|ABN74556.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306863977|gb|EFM95896.1| dTDP-glucose 4,6-dehydratase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 357 Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust. Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 12/121 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+ + F + PD +++ AA + VD++ D P N G + +A+ + Sbjct: 58 VDICDSGRISQLFCKYQPDAVMHLAAESHVDRSIDGPAAFMQTNIIGTYTLLEASRRYWL 117 Query: 94 PCI----------YISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +ISTD V+ G + E SP P + Y SK + + V ++ Sbjct: 118 DLSREKKQDFRFHHISTDEVYGDLGHDKGLFTETSPYAPSSPYSASKASSDHLVRAWFRT 177 Query: 142 Y 142 Y Sbjct: 178 Y 178 >gi|229825469|ref|ZP_04451538.1| hypothetical protein GCWU000182_00829 [Abiotrophia defectiva ATCC 49176] gi|229790032|gb|EEP26146.1| hypothetical protein GCWU000182_00829 [Abiotrophia defectiva ATCC 49176] Length = 352 Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTDY 102 F P+ ++N AA + VD++ P+ N G G + A GI + +STD Sbjct: 75 KLFEEEKPEQVVNFAAESHVDRSVLFPDEFLRTNITGVGVLLDACRKYGIERFHQVSTDE 134 Query: 103 VFDGLSRTPIDE----FSPTNPLN 122 V+ L P+D F+ T PLN Sbjct: 135 VYGDL---PLDREDLFFTETTPLN 155 >gi|331092396|ref|ZP_08341222.1| hypothetical protein HMPREF9477_01865 [Lachnospiraceae bacterium 2_1_46FAA] gi|330401420|gb|EGG81006.1| hypothetical protein HMPREF9477_01865 [Lachnospiraceae bacterium 2_1_46FAA] Length = 620 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 22/115 (19%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + P+V+ + AA+ V ED P A N G A AA G+ + ISTD Sbjct: 364 KYRPNVVYHAAAHKHVPLMEDNPNEAIKNNVFGTYKTASAAGKHGVERFVLISTD----- 418 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS----YTNNYVILRTAWVYSIFGSN 157 NP NI G SK E V + Y +V +R ++ GSN Sbjct: 419 ---------KAVNPTNIMGASKRMCEMIVQTLDKFYPTEFVAVRFG---NVLGSN 461 >gi|329937095|ref|ZP_08286724.1| UDP-GlcNAc C4 epimerase [Streptomyces griseoaurantiacus M045] gi|329303702|gb|EGG47587.1| UDP-GlcNAc C4 epimerase [Streptomyces griseoaurantiacus M045] Length = 327 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPI 112 I++ AA V ++ EP + N G + AA G+ ++ S+ V+ I Sbjct: 70 IVHLAARKQVGESVAEPARYYQENVGGLATLLDAAAGAGVERFVFSSSAAVYGNPDVDLI 129 Query: 113 DEFSPTNPLNIYGKSKLAGE 132 E +P P+N YG++KLAGE Sbjct: 130 TEDAPCAPVNPYGETKLAGE 149 >gi|325686711|gb|EGD28737.1| UDP-glucose 4-epimerase [Streptococcus sanguinis SK72] Length = 338 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-T 110 D +I+ AAY AV ++ EP + N G A+ + + I S+ G++ + Sbjct: 76 DAVIHFAAYKAVGESVQEPLKYYENNVGGTIALLEVMKENKVDHIIFSSSATVYGMNNIS 135 Query: 111 PIDEFSPTNPLNIYGKSKLAGEE 133 P+ E PT+ N YG +KL E+ Sbjct: 136 PLTEDLPTSATNPYGYTKLMMEQ 158 >gi|159900948|ref|YP_001547195.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159893987|gb|ABX07067.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 317 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 8/126 (6%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL P + F P + + A + P + ++N EG+ + +AA GI Sbjct: 61 DLRDPASLLALFEQHRPSHVAHLAGMANPRYSLQYPALYSAVNVEGSVNVWQAAIQYGIQ 120 Query: 95 C-IYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAW 149 + ST V+ GL+ TP +E + PL+ Y +K A E + +YT +Y + R Sbjct: 121 AFVQASTSSVY-GLAPTPWHEELATDRPLSPYAATKKASE--LLAYTFHYQTQIPTRVVR 177 Query: 150 VYSIFG 155 ++++G Sbjct: 178 FFTVYG 183 >gi|147921593|ref|YP_684590.1| dTDP-glucose 4,6-dehydratase [uncultured methanogenic archaeon RC-I] gi|56295560|emb|CAH04802.1| dtdp-glucose 4,6-dehydratase [uncultured archaeon] gi|110619986|emb|CAJ35264.1| dTDP-glucose 4,6-dehydratase [uncultured methanogenic archaeon RC-I] Length = 312 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 27/174 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD---VEII-------------RVGRPDI-----DLLKP 39 MKC+V G G I L+ +++ V ++ V P+ DL + Sbjct: 1 MKCIVTGGAGFIGSHLTDRLLEEGHEVTVVDNLSGGQFRFIEHHVTNPEFSFVNEDLARD 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YI 98 +S F D++ + AA V + + N + ++ + G+ I + Sbjct: 61 GLISSAFEG--ADMVYHLAANPDVRSGVTDTRTPLTQNTIATFNVLESMRAAGVRKIAFT 118 Query: 99 STDYVFDGLSRTPIDE-FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ST V+ P E + P P+++YG SKLA E +++Y + + + +W+Y Sbjct: 119 STSTVYGEAEVIPTPENYGPLMPISLYGASKLACEAMISAYCHTFDM--QSWIY 170 >gi|89067504|ref|ZP_01155017.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] gi|89047073|gb|EAR53127.1| NAD-dependent epimerase/dehydratase [Oceanicola granulosus HTCC2516] Length = 664 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 34/160 (21%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSR 109 D +++ AA TAV + P F +NA G + +A + G +P ++ ST+ V+ L+ Sbjct: 390 DAVLHMAAQTAVTTSLTSPVADFDVNARGTLNVLEALRATGRPVPLLFASTNKVYGDLAD 449 Query: 110 ----------TPID---------EFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR 146 P D E P + YG SK ++ V Y +Y +LR Sbjct: 450 LTVTDSNEACAPDDPSVRAHGVGEGRPLDFCTPYGCSKGVADQYVLDYAKSYGLPAAVLR 509 Query: 147 TAWVYS--IFGS---NFLLSMLRLAKERREISVVCDQFGT 181 + +Y FG+ ++ L A ++R I+V FGT Sbjct: 510 MSCIYGPRQFGTEDQGWVAHFLIQALKKRPITV----FGT 545 >gi|124004020|ref|ZP_01688867.1| capsular polysaccharide biosynthesis protein CapD [Microscilla marina ATCC 23134] gi|123990599|gb|EAY30079.1| capsular polysaccharide biosynthesis protein CapD [Microscilla marina ATCC 23134] Length = 318 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 17/115 (14%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFAS----------------FFL 47 L+ G G + + L+ + +++ GR + L K F F Sbjct: 6 LITGGTGFLGKRLALALKDEYKVVLTGRNNKQNLLAKKFTGCEVAPMDISSIESVRDTFR 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY-ISTD 101 F P V+I+ AA VD AE P +N G+ +A+ A + + ISTD Sbjct: 66 EFKPHVVIHAAATKFVDLAEKYPMECIDVNVVGSQNVARLAIDQNVEVVVGISTD 120 >gi|148655748|ref|YP_001275953.1| dTDP-glucose 4,6-dehydratase [Roseiflexus sp. RS-1] gi|148567858|gb|ABQ90003.1| dTDP-glucose 4,6-dehydratase [Roseiflexus sp. RS-1] Length = 350 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ P + D ++N AA T VD++ +P+ + G + +A + + Sbjct: 60 DICDPAGVREVIRAHGVDTLVNFAAETHVDRSIMDPDAFIRTDVYGTYVLLEAVKEMKLE 119 Query: 95 -CIYISTDYVFD----GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ G S + D P +P Y SK GE +Y Y Sbjct: 120 RALFVSTDEVYGHIEPGHSSSEDDPLKPRSP---YAASKAGGEHLAYAYYITY 169 >gi|29725999|gb|AAO88929.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 37/178 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-----------------IIRVGRPD------IDLL 37 MK LV G G I ++ +Q+ + ++ V + +D+ Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLVSVAGSERYAFEQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------- 88 + F + PD +++ AA + VD++ D P N G + +AA Sbjct: 61 DRAELDRVFAGYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSNLES 120 Query: 89 -DSIGIPCIYISTDYVFDGLSRTPIDEFSPT---NPLNIYGKSKLAGEEKVASYTNNY 142 + +ISTD V+ L T D F+ T P + Y SK + + V ++ Y Sbjct: 121 ERKVAFRFHHISTDEVYGDLEGTD-DLFTETTAYEPSSPYSASKASSDHLVRAWLRTY 177 >gi|86357152|ref|YP_469044.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CFN 42] gi|86281254|gb|ABC90317.1| dTDP-glucose-4,6-dehydratase protein [Rhizobium etli CFN 42] Length = 351 Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 34/176 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRV------GRP---------------DIDLL 37 M+ LV G G I +L V ++ E++ V G P D+ Sbjct: 1 MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNPASLKSVESAPNYQFLHADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------- 88 F SF P+++++ AA + VD++ N G ++ AA Sbjct: 61 DRARMLEAFASFRPEIVMHLAAESHVDRSISSAADFIQTNIVGTFSLLDAARYYWDGLDA 120 Query: 89 -DSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 D +++STD V+ L + +E +P +P + Y SK A + ++ Y Sbjct: 121 RDKSSFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTY 176 >gi|332977121|gb|EGK13925.1| UDP-glucose 4-epimerase [Desmospora sp. 8437] Length = 306 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 22/172 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 MK LV G G I L ++D V+ + G+ + D+L ++F Sbjct: 1 MKILVTGGAGFIGSHLVDTYIRDGHEVVVVDHLGSGQRENLNDQAVFYETDILS-EEFER 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 PDVI + AA +V + P +IN G ++ +A+ G+ + ++ Sbjct: 60 VVEKERPDVINHHAAQKSVPDSVQNPRYDANINILGLLSVLEASVKYGVKKVIYASTGAL 119 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 G R P E L+ Y SK GE+ + Y +Y V LR A VY Sbjct: 120 AG-DRIPAREDHEPQLLSPYAISKYTGEKYLRFYFLHYGLKFVALRYANVYG 170 >gi|183222606|ref|YP_001840602.1| putative epimerase/dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912640|ref|YP_001964195.1| nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167777316|gb|ABZ95617.1| Nucleoside-diphosphate-sugar epimerase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781028|gb|ABZ99326.1| Putative epimerase/dehydratase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 306 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%) Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--IYISTDYVF--D 105 PD++I+ AA V A P IN G + + + PC +Y+S+ V+ Sbjct: 52 QPDILIHLAAQAFVPNAIANPWETEEINVGGTLNLLEILHRLQKPCKMLYVSSADVYGKQ 111 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT 139 + P++E P+N Y SKLA E Y+ Sbjct: 112 NMDVLPLEESLLPKPVNPYAGSKLAAESFCRQYS 145 >gi|51243897|ref|YP_063781.1| dTDP-D-glucose-4,6-dehydratase [Desulfotalea psychrophila LSv54] gi|50874934|emb|CAG34774.1| probable dTDP-D-glucose-4,6-dehydratase [Desulfotalea psychrophila LSv54] Length = 369 Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 18/124 (14%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-- 91 +D+ ++ F PD +++ AA + VD++ D P N G I + A Sbjct: 74 VDICDREELVRVFAIHQPDAVMHLAAESHVDRSIDGPATFVETNIVGTSTILQVAQKYWS 133 Query: 92 GIP-----CI---YISTDYVFDGLSR-----TPIDEFSPTNPLNIYGKSKLAGEEKVASY 138 +P C ++STD V+ L+ T ++P++P Y SK A + V ++ Sbjct: 134 ALPEERRECFRFHHVSTDEVYGDLADPEEFFTEETSYAPSSP---YSASKAASDHLVRAW 190 Query: 139 TNNY 142 Y Sbjct: 191 QRTY 194 >gi|315452829|ref|YP_004073099.1| sugar nucleotide epimerase/dehydratase [Helicobacter felis ATCC 49179] gi|315131881|emb|CBY82509.1| sugar nucleotide epimerase/dehydratase (UDP-GlcNAc C6) [Helicobacter felis ATCC 49179] Length = 330 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 13/105 (12%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+ I+ AA V AE P N GA A+ +A C++ ++V Sbjct: 78 DICIHAAALKQVPTAEYNPLECIKTNILGASAVIEA-------CLHAQVEHVI------A 124 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 + +NP+N+YG +KL ++ S N RT + +G+ Sbjct: 125 LSTDKASNPINLYGATKLCSDKLFTSANNMKGRARTKFSVVRYGN 169 >gi|212691383|ref|ZP_03299511.1| hypothetical protein BACDOR_00875 [Bacteroides dorei DSM 17855] gi|237712174|ref|ZP_04542655.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|237726321|ref|ZP_04556802.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. D4] gi|265751865|ref|ZP_06087658.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] gi|212665993|gb|EEB26565.1| hypothetical protein BACDOR_00875 [Bacteroides dorei DSM 17855] gi|229434847|gb|EEO44924.1| GDP-mannose 4,6-dehydratase [Bacteroides dorei 5_1_36/D4] gi|229453495|gb|EEO59216.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 9_1_42FAA] gi|263236657|gb|EEZ22127.1| GDP-mannose 4,6-dehydratase [Bacteroides sp. 3_1_33FAA] Length = 368 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 5/140 (3%) Query: 8 NNGQIAQSLSSMCVQDVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKA 66 N G+I V+D++ R V D+ + PD I N AA + V + Sbjct: 48 NTGRIEHLYLDEWVRDMQKTRLVNLHWGDMTDSSSLIRIIQAVQPDEIYNLAAQSHVKVS 107 Query: 67 EDEPEIAFSINAEGAGAIAKAADSIGIP---CIY-ISTDYVFDGLSRTPIDEFSPTNPLN 122 D PE +A G + +A +G+ IY ST +F + P E +P P + Sbjct: 108 FDVPEYTAEADAVGTLRMLEAVRILGLEKKTKIYQASTSELFGLVQEVPQKETTPFYPRS 167 Query: 123 IYGKSKLAGEEKVASYTNNY 142 YG +K G +Y +Y Sbjct: 168 PYGVAKQYGFWITKNYRESY 187 >gi|120436331|ref|YP_862017.1| capsular polysaccharide biosynthesis protein [Gramella forsetii KT0803] gi|117578481|emb|CAL66950.1| capsular polysaccharide biosynthesis protein [Gramella forsetii KT0803] Length = 656 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 18/126 (14%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI- 93 D+ K F + S DV+ + AAY V E P A +N G +A A + Sbjct: 365 DVGNQKRLELMFQNQSIDVVYHAAAYKHVPLMESNPHEAIFVNIHGTKNLADLAVKYQVG 424 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL---RTAWV 150 + +STD NP N+ G SK A E V S ++ + L T ++ Sbjct: 425 HFVMVSTD--------------KAVNPSNVMGASKRAAEMYVQSLYHDQIRLDQSNTKFI 470 Query: 151 YSIFGS 156 + FG+ Sbjct: 471 TTRFGN 476 >gi|63054924|gb|AAY29001.1| dTDP-glucose 4,6-dehydratase [Stenotrophomonas maltophilia] Length = 363 Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------AADSIG 92 A PD ++N AA + VD++ D P N G + + A Sbjct: 78 AQLLADHQPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLESVRDYWKALPADKGAA 137 Query: 93 IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 +++STD V+ L T E +P P + Y SK A + V ++ + Y Sbjct: 138 FRFLHVSTDEVYGTLGETGKFSETTPYAPNSPYSASKAASDHLVRAFHHTY 188 >gi|310827557|ref|YP_003959914.1| NAD-dependent epimerase/dehydratase [Eubacterium limosum KIST612] gi|308739291|gb|ADO36951.1| NAD-dependent epimerase/dehydratase [Eubacterium limosum KIST612] Length = 288 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 14/146 (9%) Query: 34 IDLLKPK-DFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 ID L K D+ S+ FSP DV+ + A VD + ++ + +N + A+ A + Sbjct: 30 IDTLDTKGDWQSY--DFSPYDVVFHVAGIAHVDAKANMEDLYYRVNRDLTIEAAQKAKAE 87 Query: 92 GIP-CIYISTDYVFD-----GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--- 142 G+ I++S+ V+ G R + P P N YG SKL E+ + + + Sbjct: 88 GVKQFIFMSSIIVYGDSSKLGEKRVITKDTIPI-PTNFYGNSKLQAEQGILPLQDEHFKV 146 Query: 143 VILRTAWVYSIFGSNFLLSMLRLAKE 168 VILR +Y + RLA++ Sbjct: 147 VILRPPMIYGKGSKGNYPKLARLAQK 172 >gi|55376593|ref|YP_134444.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55229318|gb|AAV44738.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 309 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 11/141 (7%) Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+ + AA +V ++ ++P +N + A ++ S+ V+ P Sbjct: 73 DVVFHEAAMVSVPESIEQPVDCHELNGTATVNVFDCARRQDTRVVFASSAAVYGVPDDVP 132 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG-----SNFLLSM 162 I E +PT P + YG K GE+ YT Y V LR VY G + + + Sbjct: 133 IGEDAPTEPNSPYGFEKYLGEQYARFYTEEYGLPTVPLRYFNVYGPRGLDGEYAGVIGTF 192 Query: 163 LRLAKERREISVVCDQFGTPT 183 +R A+ ++V D GT T Sbjct: 193 VRQAQAGEPLTVEGD--GTQT 211 >gi|33864995|ref|NP_896554.1| UDP-glucose 4-epimerase [Synechococcus sp. WH 8102] gi|33638679|emb|CAE06974.1| possible UDP-glucose 4-epimerase [Synechococcus sp. WH 8102] Length = 313 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 21/118 (17%) Query: 49 FSPDVIINPAAY----TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F PD+ +N +A + ++ F +N+ +AK +S Y+ Y+F Sbjct: 60 FEPDIFVNCSAIAHKIVGLSRSRYTEAQIFDVNSRLPVTLAKVCES------YMFKRYIF 113 Query: 105 -------DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA--SYTN--NYVILRTAWVY 151 S P+ E SP P NIY SK+ E + +YT+ + VILR VY Sbjct: 114 LSSVGVHGSSSSVPLTETSPYLPENIYSASKIVAECSLREFAYTSPLDLVILRPTLVY 171 >gi|87120033|ref|ZP_01075929.1| UDP-glucose 4-epimerase [Marinomonas sp. MED121] gi|86164735|gb|EAQ66004.1| UDP-glucose 4-epimerase [Marinomonas sp. MED121] Length = 336 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DLL + F+ D +I+ A AV ++ + P + N ++ + + + Sbjct: 58 DLLDKGLVDNIFVKHDIDSVIHFAGLKAVGESNEIPLTYYRNNIAATISVLEIMATHNVK 117 Query: 95 C-IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 ++ S+ V+ + PI+E PT+ N YG+SKL EE +A Sbjct: 118 SFVFSSSATVYGDPASVPINESFPTSATNPYGRSKLMIEEVLA 160 >gi|301169592|emb|CBW29193.1| dTDP-glucose 4,6-dehydratase [Haemophilus influenzae 10810] Length = 334 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 12/127 (9%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 R ID+ K S F + PD +++ AA + VD++ N G + + Sbjct: 51 RYAFEQIDICDLKAIESVFEKYQPDAVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEV 110 Query: 88 ADS----------IGIPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A + +ISTD V+ LS E+SP +P + Y SK A + V Sbjct: 111 AKNYWYTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEYSPYHPSSPYSASKAASDHLV 170 Query: 136 ASYTNNY 142 ++ Y Sbjct: 171 YAWHRTY 177 >gi|292670417|ref|ZP_06603843.1| GDP-mannose 4,6-dehydratase [Selenomonas noxia ATCC 43541] gi|292647948|gb|EFF65920.1| GDP-mannose 4,6-dehydratase [Selenomonas noxia ATCC 43541] Length = 344 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA--KAADSIG 92 DL + + PD + N AA + V + + PE ++ A G G I +A G Sbjct: 63 DLTDSSNAHALIREIQPDEVYNLAAQSHVAVSFEVPE--YTAEATGVGTIRLLEAVRQSG 120 Query: 93 IPCIYI--STDYVFDGLSRT-PIDEFSPTNPLNIYGKSKL 129 +P + ST +F GL T P E +P P + YG +KL Sbjct: 121 LPIRFYQASTSELFGGLPDTAPQSETTPFYPKSPYGAAKL 160 >gi|29726004|gb|AAO88933.1| dTDP-D-glucose-4,6-dehydratase [Vibrio cholerae] Length = 354 Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 37/178 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--II---------------------RVGRPDIDLL 37 MK LV G G I ++ +Q+ + ++ R +D+ Sbjct: 1 MKILVTGGAGFIGSAVVRHVIQNTQDSVVNLDKLTYAGNLESLVSVAGSERYAFEQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--------- 88 + F + PD +++ AA + VD++ D P N G + +AA Sbjct: 61 DRAELDRVFAEYQPDAVMHLAAESHVDRSIDGPAAFIETNIIGTYTLLEAARHYWSNLES 120 Query: 89 -DSIGIPCIYISTDYVFDGLSRTPIDEFSPT---NPLNIYGKSKLAGEEKVASYTNNY 142 + +ISTD V+ L T D F+ T P + Y SK + + V ++ Y Sbjct: 121 ERKVAFRFHHISTDEVYGDLEGTD-DLFTETTAYEPSSPYSASKASSDHLVRAWLRTY 177 >gi|284046935|ref|YP_003397275.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] gi|283951156|gb|ADB53900.1| NAD-dependent epimerase/dehydratase [Conexibacter woesei DSM 14684] Length = 329 Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 4/111 (3%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAV-DKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 DLL PD I + AA T V D ED E+ +I A G + AA ++ Sbjct: 55 DLLDRASIRRAIAEAEPDEIYHLAAPTFVPDSWEDPTEVVAAIAA-GTATVLAAAGALPR 113 Query: 94 PC--IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 C + ++ +F +P E +PT P + YG +KLA V + + Sbjct: 114 ACRVLVAASSEIFGDAGVSPQSETAPTRPRSPYGVAKLAAHGLVGALRARH 164 >gi|229586599|ref|YP_002845100.1| dTDP-4-dehydrorhamnose reductase [Rickettsia africae ESF-5] gi|228021649|gb|ACP53357.1| dTDP-4-dehydrorhamnose reductase [Rickettsia africae ESF-5] Length = 284 Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 20/151 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKKFDIFATARNNSARSYFSKDLSDKLITNVDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 VF G + E ++ ++YG+SK GE Sbjct: 121 CVFSG-KKGNYKESDFSDCYDLYGRSKFLGE 150 >gi|153952586|ref|YP_001397759.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. doylei 269.97] gi|152940032|gb|ABS44773.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. doylei 269.97] Length = 328 Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 7/137 (5%) Query: 17 SSMCVQDVEIIRVGRP-DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 S + ++D++ IR + + DL + + F D I++ AA V ++ P + Sbjct: 37 SKIAIEDLQKIRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYM 96 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEE- 133 N + + G+ S+ G +TP+ E SP P+N YG+SKL EE Sbjct: 97 NNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSEISPLAPINPYGRSKLMSEEV 156 Query: 134 -KVASYTN---NYVILR 146 + AS N + ILR Sbjct: 157 LRDASMANPEFKHCILR 173 >gi|110635112|ref|YP_675320.1| NAD-dependent epimerase/dehydratase [Mesorhizobium sp. BNC1] gi|110286096|gb|ABG64155.1| NAD-dependent epimerase/dehydratase [Chelativorans sp. BNC1] Length = 367 Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 25/124 (20%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSRTP 111 + + AA TAV + D+P F++NAEG + +A + G IP I+ ST+ V+ L Sbjct: 93 VFHLAAQTAVTTSLDDPLGDFAVNAEGTLNVLEAVRASGRKIPVIFASTNKVYGALGDLE 152 Query: 112 I----DEFSPTNP---------------LNIYGKSKLAGEEKVASYTNNY----VILRTA 148 + D + P++ YG SK ++ V Y ++ +LR + Sbjct: 153 MVELEDRYVPSSAEVRERGISEDRRLDFCTPYGCSKGVADQYVLDYAKSFGIPTAVLRMS 212 Query: 149 WVYS 152 +Y Sbjct: 213 CIYG 216 >gi|229094369|ref|ZP_04225443.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-42] gi|228689047|gb|EEL42872.1| Nucleotide sugar epimerase [Bacillus cereus Rock3-42] Length = 329 Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTD 101 F + P++++N AA V + + P++ N G I +A + +Y S+ Sbjct: 66 VKLFEEYKPNIVVNLAAQAGVRYSIENPDVYIQSNIIGFYNILEACRHYPVDHLVYASSS 125 Query: 102 YVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFG 155 V+ + P +E NP+++Y +K + E +Y++ Y I LR VY G Sbjct: 126 SVYGANKKVPFEETDYVDNPVSLYASTKKSNELMAHTYSHLYKIPATGLRFFTVYGPMG 184 >gi|217976279|ref|YP_002360426.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] gi|217501655|gb|ACK49064.1| NAD-dependent epimerase/dehydratase [Methylocella silvestris BL2] Length = 321 Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 21/202 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V G+ G + ++ D VEI+ R ++DL ++ PDVII AA Sbjct: 13 RIWVAGHRGMVGSAIVRRLAGDPVEILTTSRAELDLRDQAAVRAWVAKEQPDVIILAAAK 72 Query: 61 TAVDKAEDEPEIAFSI-NAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFS-- 116 A D F + N + +AA G+ +++ + ++ + PI E S Sbjct: 73 VGGILANDTYPADFLVDNIVIEANVIEAAHRAGVERLVFLGSSCIYPKFAPQPIKEESLL 132 Query: 117 --PTNPLN-IYGKSKLAGEEKVASYT----NNYVILRTAWVYS------IFGSNFLLSML 163 P P N Y +K+AG + +Y NY+ + + +Y + S+ L +++ Sbjct: 133 TGPLEPTNEWYAIAKIAGIKMCQAYRRQHGRNYISVMPSNLYGLNDNFDLANSHVLPALI 192 Query: 164 RL---AKERREISVVCDQFGTP 182 R AK+ VV GTP Sbjct: 193 RKFHEAKQAGRSEVVVWGTGTP 214 >gi|169826742|ref|YP_001696900.1| dTDP-glucose 4,6-dehydratase [Lysinibacillus sphaericus C3-41] gi|168991230|gb|ACA38770.1| dTDP-glucose 4,6-dehydratase [Lysinibacillus sphaericus C3-41] Length = 334 Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPI 112 ++N AA A+ + P N G + +AA +GI ++ ST V+ PI Sbjct: 79 VLNLAALIAIPYSYHSPATYVDTNVTGTLNVVQAAKELGIEKVVHTSTSEVYGTALYVPI 138 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 DE P + Y SK+ ++ S+ ++ Sbjct: 139 DEEHPLQGQSPYSASKIGADQMALSFYRSF 168 Searching..................................................done Results from round 2 >gi|254780921|ref|YP_003065334.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus str. psy62] gi|254040598|gb|ACT57394.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter asiaticus str. psy62] Length = 290 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 290/290 (100%), Positives = 290/290 (100%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY Sbjct: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP Sbjct: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG Sbjct: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY Sbjct: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI Sbjct: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 >gi|254416235|ref|ZP_05029989.1| dTDP-4-dehydrorhamnose reductase [Microcoleus chthonoplastes PCC 7420] gi|196176917|gb|EDX71927.1| dTDP-4-dehydrorhamnose reductase [Microcoleus chthonoplastes PCC 7420] Length = 295 Score = 367 bits (942), Expect = 1e-99, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 169/293 (57%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ L E++ V R +DL +P F PD+I+N AAY Sbjct: 2 MRILLTGMAGQLGSELQQTLAPLGEVMGVDRQGLDLTQPDKIRQVIGEFKPDMIVNAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A +IN +A+AA +G I++STDY+FDG TP E +P Sbjct: 62 TAVDKAETETELANAINGTAPTIMAEAAQQLGAALIHVSTDYIFDGKKNTPYTEDDKPDP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 +N YG+SKL GEE V + + +ILRTAWVY ++G NF+ +MLRL ER E+ VV DQ Sbjct: 122 INAYGQSKLLGEEGVLKHCDRALILRTAWVYGVYGKGNFVKTMLRLGAEREELRVVVDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI Q+ L ++ T GI+H T + G +SW DFA IF E+ E G P Sbjct: 182 GTPTWTGDLASAIAQLVQYLKSDTLT---GIYHFT-NSGAISWYDFAVAIFEEAQEIGFP 237 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ S W+ G+R +L + Sbjct: 238 LQVKRVVPITTAEYPTAAARPAYSVLSTRKISAVVGNHPSHWRTGLRRMLKQL 290 >gi|33637044|gb|AAQ23682.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 281 Score = 364 bits (936), Expect = 7e-99, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 169/291 (58%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G GQ+ L + + E+ GR ++D+ +PDV+I+ AA Sbjct: 1 MKVIVTGAKGQLGTDLVHLLADRGYEVYGYGREELDITNFDQVKQVISEVNPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE EP+ AF INA G +A A++++G +YISTDYVFDG + TP +EF+ TN Sbjct: 61 YTKVDLAESEPDQAFLINAYGTRNVAVASEAVGAKLVYISTDYVFDGTATTPYNEFALTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSKLAGE+ V + + I+RT+WVY G+NF+ +MLRLA+ER E+ VV DQ Sbjct: 121 PLSVYGKSKLAGEQFVRDLHSKFFIVRTSWVYGKHGNNFVKTMLRLAQERNELMVVNDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I++I T GI+H++ + G SW +FA+ IF E+ G Sbjct: 181 GCPTYTVDLANCILEIIQ-------TEKYGIYHVS-NSGHCSWYEFAKAIFEEA----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV TK +P A RPAYS + L + W+E ++ +V I Sbjct: 229 EVKVNPCTTKDFPRPAPRPAYSVFEHMALRLNGFNEMRNWREALKEFIVQI 279 >gi|251798953|ref|YP_003013684.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2] gi|247546579|gb|ACT03598.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. JDR-2] Length = 283 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 111/290 (38%), Positives = 165/290 (56%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G NGQ+ + L+ + EII + R ++D+ + + PD +I+ AA Sbjct: 1 MRVAVTGANGQLGRELAMLDDNGRFEIIGLSRAELDITNLEQCRNVLAKLRPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP+ AF INA G IA AA IG +STDYVFDG P E TN Sbjct: 61 YTAVDKAESEPDEAFRINAAGTRNIAVAAREIGAKLCAVSTDYVFDGTGTVPYKEHDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SKLAGE+ V+S + Y I+RT+WV+ +G+NF+ +ML+LA +R ++ VV DQ+ Sbjct: 121 PRTVYGQSKLAGEQAVSSLHDRYFIVRTSWVFGAYGNNFVKTMLKLASQREQLKVVADQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++++ T GI+H + G SW +FA+ I ES G Sbjct: 181 GSPTYTRDLAIFLLELV-------STECYGIYHASG-SGVCSWFEFAQAIMEES----GS 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ T++YP A RP YS +D + + + W+E +R+ L N Sbjct: 229 STRIDPCTTEEYPRPAPRPHYSVMDHGAIRSNGFTPLRHWREALRHYLSN 278 >gi|291568777|dbj|BAI91049.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis NIES-39] Length = 292 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 166/293 (56%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIKPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY NF+ +MLRL++ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLSREREELRVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+Q+ L ++ GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVQLIPQL----NSETSGIYHYT-NSGVTSWYDFAIAIFEEAKLLGVP 235 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+ KLA W+ G+R +L + Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTMLKTL 288 >gi|284051015|ref|ZP_06381225.1| dTDP-4-dehydrorhamnose reductase [Arthrospira platensis str. Paraca] Length = 292 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 165/293 (56%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIKPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY NF+ +MLRL +ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLGREREELRVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+Q+ L ++ GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVQLIPQL----NSETSGIYHYT-NSGVTSWYDFAIAIFEEAKLLGVP 235 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+ KLA W+ G+R +L + Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTMLKTL 288 >gi|209526054|ref|ZP_03274587.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] gi|209493580|gb|EDZ93902.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] Length = 292 Score = 361 bits (927), Expect = 7e-98, Method: Composition-based stats. Identities = 124/293 (42%), Positives = 164/293 (55%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + E+ VGR +DL KP +S P +++N AAY Sbjct: 1 MRILLTGKNGQLGSELQPLLTPLGEVFAVGRDTLDLAKPDAISSLMAEIQPHIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A +IN G +A + I I++STDYVFDG P E PTNP Sbjct: 61 TAVDKAETETDLATAINGIAPGILAAESQRINAKLIHVSTDYVFDGTQSHPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L YG SKLAGE+ + + NY I+RTAWVY NF+ +MLRL ER E+ VV DQ Sbjct: 121 LGQYGASKLAGEQAILATDANYAIIRTAWVYGAGGTGNFVKTMLRLGGEREELKVVMDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A AI+++ L ++ GI+H T + G SW DFA IF E+ G P Sbjct: 181 GTPTWTGDLATAIVRLIPQL----NSETSGIYHYT-NSGVTSWYDFAIAIFEEAKLLGLP 235 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+ KLA W+ G+R +L + Sbjct: 236 LKIQQVIPITTAEYPTPARRPAYSVLNGKKLATLLGNHPPQWRSGLRTMLTTL 288 >gi|218438467|ref|YP_002376796.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] gi|218171195|gb|ACK69928.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] Length = 294 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 122/292 (41%), Positives = 164/292 (56%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IGNNGQ+ Q L S ++ V R +DL +P + P++I+N AAYT Sbjct: 3 KILLIGNNGQVGQELQSTLAPIGDLTGVARDQLDLTQPDNIRQVIQDTHPEIIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A+++N +A+ +G I+ISTDYVFDG P+ E TNP+ Sbjct: 63 AVDKAESETELAYTVNETAPKILAQECQKLGATLIHISTDYVFDGTRGIPLTEEDKTNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 YG SKLAGE+ + NY+ILRTAWVY +G NF+ +MLRL +R ++ VV DQ G Sbjct: 123 GAYGASKLAGEQAIQDNCQNYIILRTAWVYGTYGKGNFVKTMLRLGADREQLRVVADQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A IA I LI+ GI+H T + G SW DFA+ IF E+ G P Sbjct: 183 TPTWAKDIADTI----TQLIQLEQKVAPGIYHFT-NSGVASWYDFAKAIFEEATAIGFPL 237 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L KL W++ ++ +L + Sbjct: 238 KIKEVVPITTPEYPTPAKRPAYSVLSNQKLRALLGHYPPHWRDSLKQMLFQL 289 >gi|113475071|ref|YP_721132.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101] gi|110166119|gb|ABG50659.1| dTDP-4-dehydrorhamnose reductase [Trichodesmium erythraeum IMS101] Length = 293 Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats. Identities = 125/293 (42%), Positives = 169/293 (57%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L + + E+ VGR ++DL + P++IIN AAY Sbjct: 1 MKILLTGINGQLGNQLQTPLKKIGEVSVVGRENLDLADSNAISQLIGQVQPELIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A ++N G +AK A +G I+ISTDYVFDG P E TNP Sbjct: 61 TAVDKSEKEPELADAVNRIAPGIMAKEAKKLGATLIHISTDYVFDGSQSRPYTETDLTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 L IYGKSKLAGEE + N++I+RTAWVY +G NF+ +MLRL K+R E+ VV DQ Sbjct: 121 LGIYGKSKLAGEEAIRETEVNHIIIRTAWVYGAYGKGNFVKTMLRLGKDREELRVVYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A AI QI +L ++ G +H T + G +SW DFA IF E+ + G P Sbjct: 181 GCPTWTGDLAEAIAQIIPHL----NSQTYGTYHYT-NSGAISWYDFAMAIFEEAKKLGFP 235 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPA+S L+ K++ W +R +L + Sbjct: 236 LEVKRVVPITTAEYPTPAKRPAFSVLNSGKISKVLGNHPPYWLNSLRQMLKQL 288 >gi|119485671|ref|ZP_01619946.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106] gi|119456996|gb|EAW38123.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Lyngbya sp. PCC 8106] Length = 293 Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats. Identities = 127/294 (43%), Positives = 173/294 (58%), Gaps = 9/294 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+IG +GQ+ Q L + EI VGR +DL P+ A PD+I+N AA Sbjct: 1 MRHILLIGKDGQLGQELQQVLAPLGEIKSVGRDSLDLANPEAIAKMVAEVKPDLIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E +A +IN+ G +AK A IG I++STDYVFDG P E PT Sbjct: 61 YTAVDKAETEQNLAQAINSTAPGILAKQAQEIGATLIHVSTDYVFDGSQSHPYLETDPTQ 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQ 178 PL +YG+SKLAGE+ + S N I+RTAWVY + G NF+ +MLRL ER E+ VVCDQ Sbjct: 121 PLGVYGQSKLAGEQAILSTQANAAIVRTAWVYGVGGKGNFVKTMLRLGAEREELRVVCDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A AI+Q++ + + + GI+H T + G SW DFA IF E+ + G Sbjct: 181 VGSPTWTGDLAEAIVQLSQQI----NPEIAGIYHYT-NSGVTSWYDFAIAIFEEAKQLGF 235 Query: 239 PYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +V I T +YPT A RPAYS L+ K++ W++ +R +L + Sbjct: 236 PLKIQRVVPISTAEYPTPARRPAYSVLNTQKISAILGSYPPHWRQSLRKMLSKL 289 >gi|332705309|ref|ZP_08425387.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] gi|332355669|gb|EGJ35131.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] Length = 296 Score = 357 bits (918), Expect = 7e-97, Method: Composition-based stats. Identities = 128/292 (43%), Positives = 165/292 (56%), Gaps = 6/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ Q L ++I VGR D+DL +P+ PDVI+N AAYT Sbjct: 3 KILLTGITGQVGQELEDTLSPLGQVIGVGRSDMDLAEPESIRQVIHQIKPDVIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E +A SINA +A+ A ++G ++ISTDYVFDG TP E NP+ Sbjct: 63 AVDKAETELALAKSINAVAPTIMAEEAQNLGAILLHISTDYVFDGKKNTPYTEQDTPNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 YGKSKL GEE V + +ILRTAWVY NF+ +MLRL ER E+ VV DQ G Sbjct: 123 GSYGKSKLQGEEGVQQKCDRILILRTAWVYGTRGHGNFVKTMLRLGAEREELRVVADQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A IA I Q+ + +S+ L GI+H T + G SW DFA IF E+ G P Sbjct: 183 TPTWAKDIAVTITQLLQAM--DSNPMLGGIYHFT-NTGVTSWYDFAVAIFEEAKLLGFPL 239 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ T W++ +R +L + Sbjct: 240 KLQRVVPITTPEYPTPAQRPAYSVLSNQKISQTLGSYPPHWRQSLRQMLAEL 291 >gi|257058395|ref|YP_003136283.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] gi|256588561|gb|ACU99447.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] Length = 296 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 124/292 (42%), Positives = 167/292 (57%), Gaps = 7/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ Q L E+I V R IDL KP P++IIN AAYT Sbjct: 4 KILVTGIDGQVGQELKKTLNPLGEVIGVNRQTIDLTKPDRLRQLIQEIHPNIIINGAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A ++N IA+ A +G ++ISTDYVFDG P E PT+P+ Sbjct: 64 AVDQAEKEPELALAVNGIAPTIIAEEAHKLGAFLLHISTDYVFDGTKNIPYTEEDPTHPV 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + +++ YVILRTAWVY + SNF+ +MLRL +ER +I VV DQ G Sbjct: 124 SVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKSNFVKTMLRLGQEREQIRVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A IA+ I Q+ L + I+H T + G SW DFA IF E+ G P Sbjct: 184 SPTWAQDIAQTINQLLLTLDLKNTAE---IYHFT-NSGVASWYDFAVTIFEEAQNIGFPL 239 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP+YS L K+ T W+ ++ +L + Sbjct: 240 KVQQVDPITTADYPTPAKRPSYSVLSGQKITATLGKYPPYWRNSLKQMLEQL 291 >gi|225386776|ref|ZP_03756540.1| hypothetical protein CLOSTASPAR_00524 [Clostridium asparagiforme DSM 15981] gi|225047138|gb|EEG57384.1| hypothetical protein CLOSTASPAR_00524 [Clostridium asparagiforme DSM 15981] Length = 288 Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ Q L + + +E + V ++D+ SPD +I+ AA Sbjct: 4 MKVLVTGAKGQLGQDLMNELAKRGIEAVGVDVQEMDITDAAAVDRVMKQVSPDAVIHCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INAEG IA+ + +YISTDYVF+G P + Sbjct: 64 YTAVDAAEDNLELCRKINAEGTRNIARVCKELDSKLMYISTDYVFNGQGERPWEPDDHRE 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V Y +R AWV+ + G NF+ +MLRL +ER +SVV DQ Sbjct: 124 PLNVYGLTKYEGEIAVEQAVKKYFTVRIAWVFGLNGKNFIKTMLRLGRERGAVSVVDDQI 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 184 GSPTYTYDLARLLVDMIQ-------TECYGRYHATNE-GICSWYEFACEIFKQA---GMD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + YP KA RP+ S + KL R+ W++ + L + Sbjct: 233 QVKVTPVDSASYPAKAKRPSNSRMSKEKLTENGFERLPDWQDALSRYLKEL 283 >gi|300866608|ref|ZP_07111296.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] gi|300335380|emb|CBN56456.1| dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] Length = 290 Score = 355 bits (911), Expect = 5e-96, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 166/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+AQ L + + E+I R DL +P P++++N AAY Sbjct: 1 MKILLTGSGGQLAQELEPILLSAGEVIAGDRTFFDLSQPDSIHQLMGEIKPNLVVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++N G +A+ + +G I+ISTDYVF G P E TNP Sbjct: 61 TAVDKAESEPELANAVNGIAPGILAEECEKLGATLIHISTDYVFGGSQGYPYCETDTTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 L +YGKSKLAGE + + ++I+RTAWVY G NF+ +MLRL K+R EI VV DQ Sbjct: 121 LGVYGKSKLAGELSIIKALDRHIIIRTAWVYGNGGKGNFVKTMLRLGKDREEIRVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G+PT +A AI QI ++ + G +H T + G SW DFA IF E+ + G Sbjct: 181 GSPTWTGDLAAAISQITSSI----RPEIFGTYHYT-NSGVASWYDFAVAIFEEAKQLGFS 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T +YPT A RPAYS L +K++ W+EG+R +L Sbjct: 236 LKVKRVIPITTPEYPTPAKRPAYSVLSSTKISAVLGSHPPHWREGLRQMLAR 287 >gi|17231982|ref|NP_488530.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120] gi|17133626|dbj|BAB76189.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nostoc sp. PCC 7120] Length = 294 Score = 354 bits (910), Expect = 6e-96, Method: Composition-based stats. Identities = 127/290 (43%), Positives = 172/290 (59%), Gaps = 9/290 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G+NGQ+ Q + ++ +II V RP IDL + P +IIN AAYTA Sbjct: 5 ILLLGSNGQVGQEIQNLLAPRYKIISVARPRIDLTQADSLRQIIREVQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPEIA +INA IA+ + +G I+ISTDYVFDG P E PTNPL+ Sbjct: 65 VDKAETEPEIATAINATAPQIIAEESQKLGSFLIHISTDYVFDGQQSHPYQETDPTNPLS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE + +++ILRTAWVY F SNF+ +MLRL ER+EI VV DQ G+ Sbjct: 125 VYGKTKLAGEIAIQQTHPHHIILRTAWVYGSFGKSNFVKTMLRLGAERQEIRVVKDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA I Q+ + + G +H T + G +SW +FA IF ES + G P + Sbjct: 185 PTWAQDIADTIAQVIPQI-----PEISGTYHYT-NTGVISWYEFAVAIFAESQKLGFPLT 238 Query: 242 --KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ I T +YPT A RPAYS L C K++ W++ +R +L + Sbjct: 239 VQQIIPITTAEYPTLAPRPAYSVLACEKMSQVLGTAPPHWQQRLRLMLQD 288 >gi|126654758|ref|ZP_01726292.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp. CCY0110] gi|126623493|gb|EAZ94197.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cyanothece sp. CCY0110] Length = 292 Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 166/292 (56%), Gaps = 7/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ Q L E+I R +DL P + PD+IIN AAYT Sbjct: 3 KILLTGSDGQVGQDLQQTLSPIGEVIATNRQQLDLTSPDNIRQVIQKIQPDIIINSAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++AF++N IA+ A IG ++ISTDYVFDG TP E T+PL Sbjct: 63 AVDKAESESDLAFAVNGVAPAIIAEEAKKIGAFLLHISTDYVFDGKKNTPYLETDITHPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE+ + + YVILRTAWVY G NF+ +MLRL +++ ++ +V DQ G Sbjct: 123 GVYGKSKLAGEQGIEKNGDRYVILRTAWVYGTEGKGNFVKTMLRLGQQKEQLGIVSDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + IA I QI L + R I+H T + G SW D A IF E+ G P Sbjct: 183 SPTWSYDIANTISQILTKL---NLAETREIYHFT-NSGVASWYDLAVAIFEEAKNLGFPL 238 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +V I T++YPT A RP YS L K AN W++ ++ +L+ + Sbjct: 239 NIKQVNPITTEEYPTPAKRPHYSVLSGKKTANLLGYNAPYWRDSLKEMLIKL 290 >gi|332971546|gb|EGK10496.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330] Length = 308 Score = 354 bits (909), Expect = 9e-96, Method: Composition-based stats. Identities = 119/285 (41%), Positives = 161/285 (56%), Gaps = 3/285 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L + EI R +D+ + +F PD+IIN AA+ Sbjct: 17 MKYLITGANGQVGSQLVAQLQGKAEIFAADRATLDITNRETVFQAARTFRPDIIINAAAH 76 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP++A +IN GA +A AA +G ++ISTDYVFDG T E P P Sbjct: 77 TAVDKAESEPDLAHAINCTGAENLALAAQEVGAIVLHISTDYVFDGKGETAYRETDPVAP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGKSKLAGE+ V + ++ILRTAWV+ G+NF+ +MLRL R + VV DQFG Sbjct: 137 QSTYGKSKLAGEQAVQAACTRHIILRTAWVFGEHGNNFVKTMLRLGASRDTLGVVADQFG 196 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 +PT A IA A+I +A ++ D L G++H + VSW FA IF ++ +G Sbjct: 197 SPTYAGDIAAALIVMAEQIVNQKDNELFGVYHFSG-SPYVSWHGFASEIFVQAVAQGVLA 255 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + I T YPT A RPA S LDC K+ I S W++ + Sbjct: 256 KSPTLNAITTADYPTPAVRPANSRLDCGKVQAAFGIAPSDWRKAL 300 >gi|260173433|ref|ZP_05759845.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 286 Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YSIFG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSIFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCLEKL 282 >gi|229587852|ref|YP_002869971.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SBW25] gi|229359718|emb|CAY46566.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens SBW25] Length = 289 Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 170/289 (58%), Gaps = 2/289 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+++ L E+I +GR +DL + PD+IIN AA+ Sbjct: 1 MKVLITGQHGQVSRELQLQLQGLGELIVLGRDQLDLANADQIRQQIRAHRPDLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ AF+INA G +A+ A ++GIP I+ STDYVFDG P E NP Sbjct: 61 TAVDQAESEPDAAFAINAIAPGVLAEEAKALGIPLIHYSTDYVFDGSKPDPYTEADTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SKLAGEE +A+ +Y+ILRT+WVYS G NFLL+M RL +E+ ++ +V DQ G Sbjct: 121 LGVYGQSKLAGEEAIAAVGGDYLILRTSWVYSSHGKNFLLTMQRLLQEKPQMRIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR+ + + + GI+H+T + G SW FAE I +G Sbjct: 181 APTWAGSIARSTRALIERW-QAGEPGEWGIYHLT-NQGETSWFGFAEAIGAHLRTQGKAC 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ I + YPT A RP S LDCS+L ++ +W++ +R L Sbjct: 239 AELEAIPSSAYPTPAKRPLNSRLDCSRLQQQWHVSQPSWQDALRECLAQ 287 >gi|160886448|ref|ZP_02067451.1| hypothetical protein BACOVA_04459 [Bacteroides ovatus ATCC 8483] gi|156108333|gb|EDO10078.1| hypothetical protein BACOVA_04459 [Bacteroides ovatus ATCC 8483] Length = 286 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCLEKL 282 >gi|288559365|ref|YP_003422851.1| dTDP-4-dehydrorhamnose reductase RfbD [Methanobrevibacter ruminantium M1] gi|288542075|gb|ADC45959.1| dTDP-4-dehydrorhamnose reductase RfbD [Methanobrevibacter ruminantium M1] Length = 286 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 113/287 (39%), Positives = 162/287 (56%), Gaps = 13/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G G + L + ++ ++I G D+D+ + F P+++IN AAY Sbjct: 1 MRILITGAYGMLGSDLREVL-KNHDLIATGSKDLDITDEERCIDFIAKERPEIVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD E + A+++NA G +A A + I IP ++ISTDYVFDG RTP+ E P Sbjct: 60 TAVDDCETHYDDAYAVNALGPRNLAIACNKIDIPLVHISTDYVFDGTKRTPLIENDKLGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGK+KLAGEE + T Y ILRTAW+Y I G NF+ +ML LAKE EI+VV DQ G Sbjct: 120 QSAYGKTKLAGEEFIQENTQKYFILRTAWLYGIHGGNFVKTMLDLAKEHDEITVVNDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +L +A AI ++ D+ GI+H+T D G SW DFA+ IF S Sbjct: 180 SPTFSLDLAMAICEVL-------DSDKYGIYHLTND-GECSWYDFAKEIFRISD----ID 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T+++P A RP YS L K + + + +KE + + Sbjct: 228 VKVIPVSTEEFPRPAPRPHYSVLSNVKWKSAGFVPMRDYKEALNQYI 274 >gi|240948931|ref|ZP_04753287.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305] gi|240296746|gb|EER47357.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus minor NM305] Length = 292 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 117/287 (40%), Positives = 167/287 (58%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L+ EI+ V R ++D+ +F PDVIIN AA+T Sbjct: 3 KFLITGAKGQVGHCLTEQLTGKAEILAVDRDELDITDQSAVKKIVKTFKPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ IG ++ISTDYVF+G E TNP Sbjct: 63 AVDRAESEVELSEAINVKGPQYLAEAANEIGAMILHISTDYVFEGTGSGEYKEDDQTNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KLAGE V + +ILRTAWV+ G NF+ +MLRLAK+R + +V DQFG Sbjct: 123 GVYGRTKLAGEIAVQQANSRSIILRTAWVFGEHGHNFVKTMLRLAKDRDSLGIVGDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA+ +I+IA+ ++ + G++H T VSW +FA+ IF E+ + Sbjct: 183 PTYAGDIAKTLIEIANQILAGKE-DAFGVYHFTGK-PYVSWYEFAKAIFAEAELQNILEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA S LD +K+ NI S W++ ++NI Sbjct: 241 SPLVNSIATSDYPTPAKRPANSRLDLTKIKQVFNIEPSNWQKALKNI 287 >gi|75909561|ref|YP_323857.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703286|gb|ABA22962.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413] Length = 296 Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats. Identities = 128/290 (44%), Positives = 168/290 (57%), Gaps = 9/290 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG NGQ+ Q + + ++I RP IDL + P +IIN AAYTA Sbjct: 5 ILLIGGNGQVGQEIHQILAPKYKVISAARPRIDLTQADSLRQIIQEVQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPEIA +INA IA+ + +G I+ISTDYVFDG P E PTNPL+ Sbjct: 65 VDKAETEPEIATAINATAPQIIAEESQKLGSFLIHISTDYVFDGQQSHPYQETDPTNPLS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE + ++ILRTAWVY F SNF+ +MLRL ER+EI VV DQ G+ Sbjct: 125 VYGKTKLAGEIAIQQTHPQHLILRTAWVYGSFGKSNFVKTMLRLGAERQEIRVVKDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA I Q+ + + G +H T + G +SW DFA IF ES + G P + Sbjct: 185 PTWAQDIADTIAQVIPQI-----PEISGTYHYT-NTGVISWYDFAVAIFAESQKLGFPLT 238 Query: 242 --KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ I T +YPT A RPAYS L C K++ W+E +R +L + Sbjct: 239 VQQIIPITTAEYPTLAPRPAYSVLACEKMSQVLGTAPPHWQERLRLMLQD 288 >gi|307153969|ref|YP_003889353.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306984197|gb|ADN16078.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 294 Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G+NGQ+ Q L + EII V R +DL + + P++I+N AAYT Sbjct: 3 RILLLGSNGQLGQELQTTLAPLGEIISVARDQLDLTQTESIRQLIAQVHPEMIVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A+++N +A+ + + +++STDYVFDG P+ E TNP+ Sbjct: 63 AVDKAESETELAYAVNEIAPKILARESQKLAATFLHVSTDYVFDGTRGIPLTETDETNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 +Y KSKLAGE+ +A Y+ILRTAWVY + SNF+ ++LRL ER ++ VV DQ G Sbjct: 123 GVYAKSKLAGEKAIAENCERYIILRTAWVYGTYGKSNFVKTLLRLGAEREQLRVVADQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A IA AI + L+E + + GI+H T + G SW DFA IF E+ G P Sbjct: 183 TPTWAKDIADAIAK----LLELEEKTPTGIYHFT-NSGVASWYDFARAIFEEAKLIGFPL 237 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T +YPT A RPAYS L K+ W++ ++ +L + Sbjct: 238 KINEVVPITTAEYPTPAKRPAYSVLSQQKIRPLLGNYPPYWRDSLKQMLFQL 289 >gi|325279645|ref|YP_004252187.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM 20712] gi|324311454|gb|ADY32007.1| dTDP-4-dehydrorhamnose reductase [Odoribacter splanchnicus DSM 20712] Length = 293 Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 167/290 (57%), Gaps = 9/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G NGQ+ L + E+ ++D+ F D IIN AAY Sbjct: 3 NILITGANGQLGSELRKIGFSPLDEVFFTDVAELDITDYTAIEKFIQVHEVDTIINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDEP A IN + +AKAA I+ISTDYVFDG + TP E T P Sbjct: 63 TAVDRAEDEPGPAAEINTQAVANLAKAAQKGDCLLIHISTDYVFDGTATTPYTEKIKTCP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGK+KLAGEE + Y+I+RTAW+YS FG NF+ ++LRLA+ER EI+VV DQ G Sbjct: 123 VSVYGKTKLAGEEAIIRSGCFYIIIRTAWLYSAFGHNFVKTILRLAEERPEINVVNDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A+AI++I N + GI+H + + G SW DFA I S G Sbjct: 183 TPTYAEDLAKAIVKIMAN---DDRVEHEGIYHYS-NAGVCSWYDFAVEIVRLS----GLN 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YPTK HRPAYS LD +K+ +T + + W+E +R ++ I Sbjct: 235 CRVNPVTTAEYPTKTHRPAYSVLDKTKIKHTFGVEVPEWQEALRRMMGEI 284 >gi|218245359|ref|YP_002370730.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] gi|218165837|gb|ACK64574.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] Length = 296 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 124/292 (42%), Positives = 166/292 (56%), Gaps = 7/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ Q L E+I V R IDL KP P++IIN AAYT Sbjct: 4 KILVTGIDGQVGQELKKTLNPLGEVIGVNRQTIDLTKPDRLRQLIQEIHPNIIINGAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A ++N IA+ A +G ++ISTDYVFDG P E PT+PL Sbjct: 64 AVDQAEKEPELALAVNGIAPTIIAEEAHKLGAFLLHISTDYVFDGTKNIPYTEEDPTHPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + +++ YVILRTAWVY + SNF+ +MLRL +ER +I VV DQ G Sbjct: 124 SVYGQSKLAGEQGIQKHSDRYVILRTAWVYGSYGKSNFVKTMLRLGQEREQIRVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A IA+ I Q+ L + I+H T + G SW DFA IF E+ G P Sbjct: 184 SPTWAQDIAQTINQLLLTLDLKNTAE---IYHFT-NSGVASWYDFAVTIFEEAQNIGFPL 239 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP+ S L K+ T W+ ++ +L + Sbjct: 240 KVQQVDPITTADYPTPAKRPSSSVLSGQKITATLGKYAPYWRNSLKQMLTQL 291 >gi|315122653|ref|YP_004063142.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496055|gb|ADR52654.1| dTDP-4-dehydrorhamnose reductase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 289 Score = 352 bits (903), Expect = 4e-95, Method: Composition-based stats. Identities = 221/289 (76%), Positives = 246/289 (85%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LVIGNNGQ+A SL ++ ++ E+IR+GRPDIDLLKPKDF FLSF+PDVIINPAAY Sbjct: 1 MKFLVIGNNGQVATSLFNLSGKNTEVIRLGRPDIDLLKPKDFVKIFLSFAPDVIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDEP AF+IN EGAGA+A AA+SIG+PCI+ISTDYVFDG S+TP+ E SPTNP Sbjct: 61 TAVDKAEDEPHNAFAINTEGAGAVAAAAESIGVPCIHISTDYVFDGSSQTPLCETSPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L IYGKSKLAGEEKV S T+NYVILRTAWVYS+FG+NF LSMLRL+KE REISVVCDQFG Sbjct: 121 LGIYGKSKLAGEEKVMSCTDNYVILRTAWVYSLFGTNFFLSMLRLSKEYREISVVCDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTSA QIA A+IQIA NL+ NSD SLRGIFHMTA+GGPVSWADFAEYIF S E GG Sbjct: 181 TPTSASQIAIAVIQIARNLVNNSDNSLRGIFHMTANGGPVSWADFAEYIFLVSTELGGNS 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV RI T QYPTKA RPAYS LDCSKL HN+RIS+WKEGVRNI + Sbjct: 241 CKVRRISTNQYPTKARRPAYSFLDCSKLEKIHNVRISSWKEGVRNIFIK 289 >gi|229175940|ref|ZP_04303437.1| hypothetical protein bcere0006_50100 [Bacillus cereus MM3] gi|228607534|gb|EEK64859.1| hypothetical protein bcere0006_50100 [Bacillus cereus MM3] Length = 280 Score = 352 bits (903), Expect = 5e-95, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 169/290 (58%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G GQ+AQ + D+++ + R ++D+ + ++ PD I++ AA Sbjct: 1 MKVIVTGAKGQLAQDVLKQLEHTDLQVYGIDREELDITNNEAVQAYINKIKPDAIMHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++ E A+ +N G +A+AA IG +YISTDYVFDG ++ P + PT Sbjct: 61 YTNVDAAEEDAETAYKVNGLGTKYLAQAAGEIGAKMLYISTDYVFDGTAKNPYETSEPTK 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++KLAGE V Y + + I+RTAWV+ IFG+NF+ +MLRL KE EISVV DQ Sbjct: 121 PLGVYGETKLAGETFVQQYVDKFFIVRTAWVFGIFGNNFVKTMLRLGKEHDEISVVHDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR +I++ + GI+H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTVDLARFMIELIR-------SEKYGIYHAT-NTGVCSWYEFAVEIFNQA----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T+++P A RP YS L K+ + + WKE ++ L+ Sbjct: 229 EVKVNPVTTEEFPRPAARPHYSVLSKQKIEDEGFSSLQDWKEALKAYLLE 278 >gi|122934727|gb|ABM68332.1| RmlD [Geobacillus tepidamans] Length = 282 Score = 351 bits (902), Expect = 5e-95, Method: Composition-based stats. Identities = 123/289 (42%), Positives = 161/289 (55%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q + E+ + D+D+ PD+IIN AA Sbjct: 1 MKIVVTGANGQLGQELVRQLQQTNFELYSFTKSDLDITNESIVNEVITKIKPDIIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G ++A AA+ +G YISTDYVFDG S P E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRSLAVAAEKVGAKICYISTDYVFDGNSAIPYREYDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSKL GEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKLVGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIGVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A II++ T GI+H T + SW +FA+ IF ES Sbjct: 181 GSPTYTVDLAHFIIELVQ-------TEKFGIYHAT-NSEACSWYEFAKAIFEES----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV I T+Q+P A RP YS LD + + W+E ++ L Sbjct: 229 KVKVNPITTEQFPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFLK 277 >gi|307130157|ref|YP_003882173.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii 3937] gi|306527686|gb|ADM97616.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii 3937] Length = 287 Score = 351 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + + E+ ++D+ + + ++ PDVI+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPEGWEVWTTDSDELDITNREQVLTAIAAYPPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +N G +A AA +G +++STDYVFDG + P E PTNP Sbjct: 61 TAVDKAESEPEQAVLVNKAGPENLALAAKLVGARLVHVSTDYVFDGKATVPYVETDPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V + +I+RTAWV+S +G+NF+ +MLRL KER +SVV DQ G Sbjct: 121 LGVYGQTKLDGERAVVAVLPESIIIRTAWVFSEYGNNFVKTMLRLGKEREMLSVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA+AII + ++ G++H D VSW FA IF + E+ Sbjct: 181 CPTYAGDIAQAIIILLQQQVDTG-----GLYHFCGDE-EVSWHGFASAIFTIAGEQQTLT 234 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+QYPT A RPAYS LDCSK+ I+ S W+E + I+ + Sbjct: 235 KVPVVNAITTEQYPTPAARPAYSTLDCSKITQLVGIQPSAWREALGIIIPKL 286 >gi|295088037|emb|CBK69560.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 288 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 165/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++++ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|41205693|gb|AAR99613.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 282 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 126/289 (43%), Positives = 165/289 (57%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q +VE+ + D+D+ PD++IN AA Sbjct: 1 MKIVVTGANGQLGQELVGQLQQTNVELYSFTKSDLDITNDSIVNETITKIKPDILINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G +A AA+ +G YISTDYVFDG S TP E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRNLAIAAEKVGAKICYISTDYVFDGTSMTPYREYDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK AGEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKYAGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIGVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR II++ T GI+H T + G SW +FA+ IF ES Sbjct: 181 GSPTYTVDLARFIIELVQ-------TEKFGIYHAT-NSGSCSWYEFAKAIFEES----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + KV I T+Q+P A RP YS LD + + W+E ++ L Sbjct: 229 HVKVNPITTEQFPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFLK 277 >gi|332715610|ref|YP_004443076.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3] gi|325062295|gb|ADY65985.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium sp. H13-3] Length = 297 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 144/290 (49%), Positives = 191/290 (65%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQ+ +L + +EI+ +GRP++DL +P PDV+++ AAY Sbjct: 1 MRLAVTGKNGQVVSALQAQAGPGLEIVALGRPELDLARPDTVFKALRDAKPDVVVSAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+IAF++N +GA A+A+AA+ IG+P I+ISTDYVFDG T E PT P Sbjct: 61 TAVDKAETEPDIAFAVNRDGAKAVARAANDIGVPVIHISTDYVFDGTKTTAYVENDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKL GE+ V+ T+NY +LRTAWVYS +GSNF+ +MLRL++ R EI+VV DQFG Sbjct: 121 ASVYGRSKLEGEQAVSESTDNYAVLRTAWVYSEYGSNFVKTMLRLSESRDEINVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA AI+ IA L + LRG+FHM+ G +WA FA+ IF SAE GG Sbjct: 181 CPTSANDIAIAIVSIAKRLATDPSAHLRGVFHMSG-TGETNWAGFAKQIFAFSAENGGKS 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T QYPT A RPA S LDC KL + IR+ W+ R ++ + Sbjct: 240 IVVNDITTAQYPTPAQRPANSRLDCCKLEEVYGIRLPEWQTSTRAVMAAL 289 >gi|229106719|ref|ZP_04236950.1| hypothetical protein bcere0019_54990 [Bacillus cereus Rock3-28] gi|228676717|gb|EEL31332.1| hypothetical protein bcere0019_54990 [Bacillus cereus Rock3-28] Length = 279 Score = 350 bits (900), Expect = 1e-94, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 161/291 (55%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ Q L + Q E+ GR ++D+ + LS +PD+II+ AA Sbjct: 1 MKVLVTGAKGQLGQDVLCLLENQQWEVFGFGREELDITNEEKVREKVLSINPDIIIHTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE + E AF +NAEG +A+AA+++ Y+STDYVFDG P TN Sbjct: 61 YTQVDQAESDEETAFKVNAEGTKYLAQAAEAVKAKFCYVSTDYVFDGTKNEPYKVDDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGE Y + I+RT+WV+ ++G+NF+ +MLRLA+E+ E+ VV DQ Sbjct: 121 PQTVYGSSKLAGEHYTQKYCSKSYIVRTSWVFGLYGNNFVKTMLRLAEEKTELGVVHDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR II + T GI+H + + G SW DFA+ IF +S Sbjct: 181 GSPTYTPDLARFIINLVK-------TDKYGIYHGS-NSGVCSWYDFAKEIFKQS----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T+ +P A RP YS LD + WKE +++ L + Sbjct: 229 EIVVNPLTTENFPRPAARPKYSVLDKGMIEENGFELFQDWKEALKDFLKKL 279 >gi|33637051|gb|AAQ23688.1| dTDP-4-dehydrorhamnose reductase [Geobacillus stearothermophilus] Length = 286 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 163/288 (56%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + + + E+ GR ++D+ + S P+V+I+ AAY Sbjct: 5 KILVTGAKGQLGAEMVKLLKDMEYEVYGYGRAELDITDFQQVKSVIDHIHPNVVIHAAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE EP+ AF +NA G + A++ IG +YISTDYVFDG + P +EF+ T+P Sbjct: 65 TNVDAAESEPDQAFFVNAYGTRNVVVASEHIGAKFVYISTDYVFDGTANAPYNEFAFTSP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKLAGE+ V + + I+RT+WVY G+NF+ +ML+LA+E++E+ VV DQ G Sbjct: 125 ISVYGKSKLAGEQFVRDLHSKFFIIRTSWVYGKHGNNFVKTMLKLAQEQKELFVVDDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I Q+ H T G++H++ + G SW +FA+ IF E+ Sbjct: 185 CPTYTVDLASCIFQLIH-------TEKYGVYHIS-NSGHCSWYEFAKAIFEEANVNIV-- 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V TK YP A RP YS LD L + W+E ++ + Sbjct: 235 --VNPCKTKDYPRPAQRPLYSVLDHMALRLNGFKELRHWREALKEFIK 280 >gi|15890374|ref|NP_356046.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens str. C58] gi|15158591|gb|AAK88831.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium tumefaciens str. C58] Length = 297 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 143/290 (49%), Positives = 202/290 (69%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQ+ +L ++ D+EI+ +GRP++DL++P++ PDV+++ AAY Sbjct: 1 MRLAVTGRNGQVVSALQALAGADLEIVTLGRPELDLVRPENVLQALREAKPDVVVSAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+IAF++N +GA A+A+AA +G+P I++STDYVFDG T E PT P Sbjct: 61 TAVDKAESEPDIAFAVNRDGAKAVAQAAKELGVPVIHLSTDYVFDGSKATAYVESDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYG+SKL GE V+ T+NYV+LRTAWVYS +G+NF+ +ML+L++ R EI+VV DQFG Sbjct: 121 TSIYGRSKLKGERAVSEATDNYVVLRTAWVYSEYGNNFVKTMLKLSESRDEINVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA A++ IA L+E+S SLRGIFH++ G +WA+FA+ IF SAE GG Sbjct: 181 CPTSATDIAAAVVAIARKLVEDSSASLRGIFHLSG-TGETTWANFAKQIFAFSAENGGKS 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I TKQYPT A RPA S L+C KL + +++ +W+ R ++ + Sbjct: 240 MIVNDITTKQYPTPAPRPANSRLNCRKLEEIYGLKLPSWQTSTREVVTAL 289 >gi|5545319|dbj|BAA82534.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus actinomycetemcomitans] Length = 292 Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats. Identities = 123/287 (42%), Positives = 167/287 (58%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGHCLTQQLQGKHEILAVDHDELDITNQSAVKKTVKNFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA S+G ++ISTDYVFDG E T+P Sbjct: 63 AVDRAETEIELSEAINVKGPQYLAEAAKSVGAAILHISTDYVFDGRRAGKYKETDATDPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +IYGK+KLAGE+ V + +++LRTAWV+ GSNF+ +MLRLAK R + VV DQ G Sbjct: 123 SIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGSNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+IQIA +I GI+H T + VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIAGKSVE-YGIYHFTGE-PYVSWCDFARAIFDEAVSQNMLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 VPLVNAITTADYPTPAKRPANSCLDLTKIQQVFGIQPSDWQRALKNI 287 >gi|153808463|ref|ZP_01961131.1| hypothetical protein BACCAC_02757 [Bacteroides caccae ATCC 43185] gi|149128785|gb|EDM20002.1| hypothetical protein BACCAC_02757 [Bacteroides caccae ATCC 43185] Length = 282 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G +GQ+ + + ++ ++D+ + ++ ++I+N A Sbjct: 1 MRILVTGADGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+A+ +N E A +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDNPELAYKLNCEAAKELASAAQFNGAAMIQVSTDYVFDGTAHIPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ + + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLKRCIDTL 282 >gi|29347140|ref|NP_810643.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|253571877|ref|ZP_04849282.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29339039|gb|AAO76837.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|251838474|gb|EES66560.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 282 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 165/292 (56%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ ++ ++I+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICNKDAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E+A+ +N+E +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDDSELAYKLNSEAPKTLACAAQFNGAAMIQVSTDYVFDGTAHIPYTEECDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE +V ++ V++RTAW+YS FG+NF+ +M+RL KER + V+ DQ Sbjct: 121 CPNSVYGTTKLEGEYEVLNHCEKSVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I +RG++H + + G SW DF I + G Sbjct: 181 VGTPTYANDLAQAIFAIINKGI------VRGVYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YPT+A+RPAYS LD +K+ T I I W+E ++ + + Sbjct: 231 TSCKVKPLHTAEYPTRANRPAYSVLDKTKIKTTFGIEIPHWEESLKRCIDTL 282 >gi|119513383|ref|ZP_01632416.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nodularia spumigena CCY9414] gi|119461962|gb|EAW42966.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Nodularia spumigena CCY9414] Length = 294 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 126/290 (43%), Positives = 167/290 (57%), Gaps = 8/290 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G+NGQ+ Q L + +II + RP IDL +P + P +IIN AAYTA Sbjct: 5 ILLLGSNGQVGQELEKILSPKHKIIPLARPKIDLTQPDNLRQIIREIQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE+A +INA+ IA+ + +G I+ STDYVFDG P E TNPL Sbjct: 65 VDKAETEPELATAINAKAPQIIAEESQKLGCFLIHFSTDYVFDGQQTRPYQETDRTNPLG 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGT 181 +YG++K AGE + +++ILRTAWVY FG NF+ +MLRL KER EI VV DQ G+ Sbjct: 125 VYGQTKRAGEIAIEQTHPHHIILRTAWVYGTFGKGNFVKTMLRLGKERSEIGVVTDQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A IA AI I L + G +H T + G +SW DFA IF E+ G P Sbjct: 185 PTWAQDIADAIAHIIPQLT----PEIAGTYHYT-NSGVISWYDFAVAIFAEAQHLGFPLT 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T +YPT A RPAY L C K++ W++ +R +L + Sbjct: 240 PPQVIPITTAEYPTLARRPAYPVLACGKISQLLGTYPPHWRQRLRLMLKD 289 >gi|172037461|ref|YP_001803962.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142] gi|171698915|gb|ACB51896.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Cyanothece sp. ATCC 51142] Length = 293 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 166/291 (57%), Gaps = 7/291 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ Q L V E++ R +DL P + PD+I+N AAYT Sbjct: 3 KILLTGSDGQVGQDLQQTLVPIGEVVATNRQQLDLTSPNNIRQVIQEIQPDIIVNSAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++AF+INA +A+ A IG ++ISTDYVFDG TP E T+PL Sbjct: 63 AVDKAESESDLAFAINAIAPAIMAEEAKKIGAFLLHISTDYVFDGTQNTPYLETDKTHPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ + + YVILRTAWVY G NF+ +MLRL +E+ ++ +V DQ G Sbjct: 123 GVYGQSKLAGEQGIEKNGDRYVILRTAWVYGTEGKGNFVKTMLRLGQEKEQLGIVSDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT + IA I Q+ L + R I+H T + G SW D A +F E+ G P Sbjct: 183 TPTWSYDIANTISQMLTQL---NLAETREIYHFT-NSGVASWYDLAVAVFEEAKNIGFPL 238 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + ++ I T++YPT A RP YS L K A W++ ++ +L+ Sbjct: 239 NIKQINPITTQEYPTPAKRPHYSVLSGKKTAKLLGYNAPYWRDSLKKMLIK 289 >gi|28170139|gb|AAM34818.1| dTDP-4-keto-L-rhamnose reductase [Vibrio vulnificus] Length = 290 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 116/288 (40%), Positives = 166/288 (57%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L+ E++ + +D+ + + F P+ IIN AAY Sbjct: 1 MKVLITGCNGQVGHCLTERLKTQAEVLALDYEGLDITNREAVFNTVAEFKPNYIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E +++F+IN +G +A+A++ G ++ISTDYVFDG+ P E T P Sbjct: 61 TAVDRAEQEVKLSFAINRDGPSYLAQASNECGAVMLHISTDYVFDGMGDKPYQEGDNTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ VA ++ILRTAWV+ G+NF+ +MLRLA+ R E+S+V DQFG Sbjct: 121 QGVYGQSKLAGEQAVAEACPEHLILRTAWVFGEHGNNFVKTMLRLAQSRDELSIVGDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A+I + IE G++H + SW DFA IF + + Sbjct: 181 GPTYAGDIADALIAMV-QYIELGSKPKWGVYHFSG-MPYASWYDFASAIFQAAEQHKMLD 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + I T YPT A RPA S LDC+K+ N I+ S W+ + NI Sbjct: 239 KQPLLSSIPTSAYPTPAKRPANSRLDCAKIENQFGIKPSDWQVALNNI 286 >gi|282877500|ref|ZP_06286319.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccalis ATCC 35310] gi|281300386|gb|EFA92736.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccalis ATCC 35310] Length = 282 Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 154/289 (53%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + + ++D+ F D I+N A Sbjct: 1 MNILITGCNGQLGNEMQVLQKDYSEHHWFNTDVNELDITDSDAINRFVEEHEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE +A ++NAE +A A + ISTDYVFDG TP E Sbjct: 61 AYTAVDKAESNKRLATALNAEAPTYLAVAMAKRDGWMVQISTDYVFDGTQHTPYIETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE VA +VI+RTAW+YS FG+NF+ +MLRL +E++++ V+ DQ Sbjct: 121 CPNSVYGATKLAGEVAVAKTCPKHVIIRTAWLYSTFGNNFVKTMLRLGQEKQQLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I + I + GI+H + + G SW DF + I + G Sbjct: 181 IGTPTYAHDLALAIMTIINKGI------VPGIYHFSNE-GVTSWYDFTKAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T +YPT AHRPAYS LD +K+ T I I W+E + + Sbjct: 231 TTCHVKPLHTAEYPTPAHRPAYSVLDKTKIKETFGIEIPHWEESLTKCM 279 >gi|186684650|ref|YP_001867846.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186467102|gb|ACC82903.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 296 Score = 348 bits (894), Expect = 5e-94, Method: Composition-based stats. Identities = 130/291 (44%), Positives = 172/291 (59%), Gaps = 8/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG+NGQ+ + L + +II V RP +DL +P S S P +IIN AAYTA Sbjct: 5 ILLIGSNGQVGKELQQILPSYGDIISVARPTVDLAQPDTLRSIIRSKQPQIIINAAAYTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE+A +INA IA+ + +G I+ISTDYVFDG P E TNPL+ Sbjct: 65 VDKAESEPELASAINATAPLIIAQESQKLGAFLIHISTDYVFDGNGYRPYQETDATNPLS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGEE + +++ILRTAWVY F SNF+ +MLRL ER+E+ VV DQ G+ Sbjct: 125 VYGKTKLAGEEAIRETCAHHLILRTAWVYGTFGKSNFVKTMLRLGAERQELRVVADQIGS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT A IA I Q L + G +H T + G SW DFA IF E+ + G P Sbjct: 185 PTWAQDIATVIAQTIPQLT----PKIGGTYHYT-NSGVASWYDFAVAIFEEAQQLGFPLK 239 Query: 241 -SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +YPT A RPAYS L C K++ S W++ +R +L ++ Sbjct: 240 VEHIVPITTAEYPTPARRPAYSVLACGKISAIVGTYPSHWRQRLRQMLADL 290 >gi|288928011|ref|ZP_06421858.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 317 str. F0108] gi|288330845|gb|EFC69429.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 317 str. F0108] Length = 282 Score = 348 bits (893), Expect = 7e-94, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + Q ++D+ F + D I+N A Sbjct: 1 MNILITGCNGQLGNEIQLLQAQYAQHTWFNTDVNELDITDKAAIERFVEANEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE +P++A +NA+ +A+A G + +STDYVF+G TP E Sbjct: 61 AYTAVDKAESDPQLARKLNADAPAFLAEAVAKRGGWMVQVSTDYVFNGTKHTPYVETDEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG++KL GE+ V+ N +I+RTAW+YS FG+NF+ +M+RL +ER ++ V+ DQ Sbjct: 121 CPNSIYGQTKLEGEQAVSKLCPNAMIIRTAWLYSEFGNNFVKTMIRLGREREQLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I+ G++H + + G SW DF + I + G Sbjct: 181 VGTPTYAHDLATAIMTAIDKGIK------PGVYHFSNE-GVTSWYDFTKSIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YPT A RPAYS LD +K+ + + I I W+E + + + Sbjct: 231 NTCQVSPLHTAEYPTPACRPAYSVLDKTKIKDAYGIEIPHWEESLAKCIAKL 282 >gi|121533498|ref|ZP_01665326.1| dTDP-4-dehydrorhamnose reductase [Thermosinus carboxydivorans Nor1] gi|121308057|gb|EAX48971.1| dTDP-4-dehydrorhamnose reductase [Thermosinus carboxydivorans Nor1] Length = 280 Score = 347 bits (892), Expect = 8e-94, Method: Composition-based stats. Identities = 114/288 (39%), Positives = 165/288 (57%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + E++ P++D+ K ++ PD++IN AAYT Sbjct: 3 KILVTGANGQLGRALQRQFCEKYELVLCDLPELDITNFKACRDAVRTYGPDIVINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V++AEDEP+ A+++NA GA +A + I+ISTDYVFDG TP E+ NPL Sbjct: 63 NVERAEDEPDAAYAVNAIGAHNLALVCREANVKLIHISTDYVFDGARGTPYSEYDAPNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKL GE+ + Y I+RTAW+Y + F+ +MLRLA ER EI+VV DQ+GT Sbjct: 123 SVYGKSKLLGEQLIRDTGGWYFIVRTAWLYGDGHN-FVRTMLRLAGERPEIAVVADQYGT 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A + QI H T GI+H T + G +W +FA IF + ++ Sbjct: 182 PTYTVDLAALLEQIMH-------TEYYGIYHAT-NAGNCTWYEFACKIFEYADKK----V 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I T +YPTKA RP YS LD L + W+E +++ + N Sbjct: 230 AVRPITTDEYPTKAKRPRYSVLDNHMLRLRGFDIMRPWEEALKDYIAN 277 >gi|166362760|ref|YP_001655033.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Microcystis aeruginosa NIES-843] gi|166085133|dbj|BAF99840.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Microcystis aeruginosa NIES-843] Length = 291 Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 122/292 (41%), Positives = 171/292 (58%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+ Q L Q E+I +GR ++DL + PD ++N +AYT Sbjct: 3 KVLLIGAKGQVGQELQVTLPQLGEVISIGREELDLTNSQKIGQLIREIHPDYLVNASAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A+SINA +A+AA+ ++ISTDYVFDG TP E TNPL Sbjct: 63 AVDKAETEPDLAYSINAIAPKIMAEAAEKTKAKFLHISTDYVFDGRKNTPYLETDLTNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKL GEE++ + + +ILRTAWVY + SNF+ +M+RL KER E+ VV DQ G Sbjct: 123 GVYGQSKLRGEEEINTVNSQAIILRTAWVYGSYGKSNFVKTMVRLGKEREELKVVVDQLG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A IA AI Q+ LI + + GI++ T + G SW D + IF E+ G P Sbjct: 183 SPTWAKDIATAITQL---LINADNPA--GIYNFT-NSGVASWFDLTKAIFEEAKTSGIPL 236 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ W++ ++ +L + Sbjct: 237 KIQRVIPITTAEYPTPAVRPAYSVLSGQKISQQLGYIPPYWRDSLKAMLTQL 288 >gi|309274611|gb|ADO64235.1| RmlD [Vibrio vulnificus] Length = 294 Score = 347 bits (892), Expect = 9e-94, Method: Composition-based stats. Identities = 115/288 (39%), Positives = 168/288 (58%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L+ E++ + +D+ + + F P+ IIN AA+ Sbjct: 5 MKVLITGCNGQVGHCLTERLKTQAEVLALDYEGLDITNREAVFNTVAEFKPNYIINAAAH 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E +++F+IN +G +A+A++ G ++ISTDYVFDG+ P E T P Sbjct: 65 TAVDRAEQEVKLSFAINRDGPSYLAQASNECGAVMLHISTDYVFDGMGDKPYQESDSTRP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ VA ++ILRTAWV+ G+NF+ +MLRLA+ E+S+V DQFG Sbjct: 125 QGVYGQSKLAGEQAVAEACPKHLILRTAWVFGEHGNNFVKTMLRLAQSCDELSIVGDQFG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA +I + N IE + G++H + VSW DFA IF + + Sbjct: 185 GPTYAGDIADTLITMVQN-IEQGNKLKWGVYHFSG-MPYVSWYDFASAIFQAAEQHKMLD 242 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + I T YPT A RPA S LDC+K+ N +I+ S W+ + NI Sbjct: 243 KQPLLSSIPTSAYPTPAKRPANSRLDCAKIENQFSIKPSDWQAALNNI 290 >gi|159027476|emb|CAO89441.1| rfbD [Microcystis aeruginosa PCC 7806] Length = 291 Score = 347 bits (891), Expect = 9e-94, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 169/292 (57%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+ Q L E+I +GR ++DL + PD ++N AAYT Sbjct: 3 KVLLIGAKGQVGQELQVTLPYLGEVISIGREELDLTNSEKIGQLIREIRPDYLVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A+SINA +A++A+ I ++ISTDYVFDG TP E TNPL Sbjct: 63 AVDKAETEPDLAYSINAIAPKIMAESAEKIKAKFLHISTDYVFDGRKNTPYLETDLTNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-GSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKL GEE++ + + +ILRTAWVY + SNF+ +MLRL KER E+ VV DQ G Sbjct: 123 GVYGQSKLRGEEEIKTVNSQAIILRTAWVYGSYGKSNFVKTMLRLGKEREELKVVVDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + IA AI Q+ N + GI++ T + G SW D + IF E+ G P Sbjct: 183 SPTWSKDIATAITQLLIN-----ADNPTGIYNFT-NSGVASWFDLTKAIFEEAKISGIPL 236 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L K++ W++ ++ +L + Sbjct: 237 KIQRVIPITTAEYPTPAVRPAYSVLSSQKISQQLGYIPPYWRDSLKAMLNQL 288 >gi|295400931|ref|ZP_06810906.1| dTDP-4-dehydrorhamnose reductase [Geobacillus thermoglucosidasius C56-YS93] gi|294976933|gb|EFG52536.1| dTDP-4-dehydrorhamnose reductase [Geobacillus thermoglucosidasius C56-YS93] Length = 282 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 123/289 (42%), Positives = 158/289 (54%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G NGQ+ Q L Q + E+ + ++D+ PD+IIN AA Sbjct: 1 MKVVVTGANGQLGQELVRQLQQTNFELYPFTKSELDITNESIVNEVITKIEPDIIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AE E E A+ +NA G + AA+ +G YISTDYVFDG S P E+ TN Sbjct: 61 YTKVDQAEIEEETAYLVNAFGQRNLVVAAEKVGAKICYISTDYVFDGSSMIPYREYDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSKL GEE S + Y I+RTAWVY FG NF+ +MLRLAKE+ EI VV DQ Sbjct: 121 PLGVYGKSKLVGEELTKSLCSRYFIVRTAWVYGEFGQNFVKTMLRLAKEKEEIHVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AR II + T GI+H T + G SW +FA IF ES Sbjct: 181 GSPTYTVDLARFIIDLVQ-------TDKFGIYHCT-NSGSCSWYEFATAIFEES----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV I T+Q P A RP YS LD + + W+E ++ L Sbjct: 229 NVKVNPITTEQLPRPAARPKYSVLDNFAMKVNGFPMLRHWREALKEFLK 277 >gi|114563992|ref|YP_751506.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] gi|114335285|gb|ABI72667.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] Length = 291 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 121/290 (41%), Positives = 162/290 (55%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ + L + + + + R ++D+ F P++IIN A Sbjct: 1 MKILITGKNGQVGRCLVDLLEAQTGLTFLALDREELDITDSIQVDKIVTEFQPNIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E+AF+IN G +A AA+ I ++ISTDYVFDG S E T Sbjct: 61 AYTAVDKAEQESELAFAINRYGPQNLAYAANKINAAILHISTDYVFDGNSAESYTESDVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 121 APQGEYGRSKLAGEHAVAQACPKHIILRTAWVFGERGNNFVKTMLRLAKTRESLGVVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA+AI+ I+ ++ S GI+H + VSW FA+ IF + E+ Sbjct: 181 FGGPTYAGDIAKAILTISKQVVRESKA--YGIYHFSG-FPHVSWYIFAKKIFEIALEQDL 237 Query: 239 P--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT A RPA S L+C K+ N I S W+ + I Sbjct: 238 HVQPIQVNPITTLDYPTPAKRPANSRLNCDKIHNAFGIEQSDWQAALVRI 287 >gi|153813195|ref|ZP_01965863.1| hypothetical protein RUMOBE_03611 [Ruminococcus obeum ATCC 29174] gi|149830726|gb|EDM85817.1| hypothetical protein RUMOBE_03611 [Ruminococcus obeum ATCC 29174] Length = 285 Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 151/292 (51%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + E + V ++D+ PD +++ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGYEGVGVDVDEMDITDRAAVERVIGEVHPDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP-T 118 +TAVD AED E+ +NAEG IA+ + IP +YISTDYVFDG P + P Sbjct: 61 WTAVDAAEDNQEVCHKVNAEGTENIARICGKLDIPMVYISTDYVFDGQGTRPWEPDDPVV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG++K GE V Y + I+R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 KPLNVYGQAKYDGEVAVEKYAPKHYIVRIAWVFGLNGKNFIKTMLNLGKTHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ + + G +H T +GG +SW DFA+ IF ++ G Sbjct: 181 IGTPTYTYDLARLLVDML-------EKEEYGKYHATNEGGYISWCDFAKEIFRQA----G 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP S L+ KL R+ WK+ + L I Sbjct: 230 MDVKVLPVSSAEYPAKAKRPTNSRLEKKKLEEHGFTRLPDWKDALGRYLKEI 281 >gi|295397280|ref|ZP_06807375.1| dTDP-4-dehydrorhamnose reductase [Aerococcus viridans ATCC 11563] gi|294974486|gb|EFG50218.1| dTDP-4-dehydrorhamnose reductase [Aerococcus viridans ATCC 11563] Length = 279 Score = 346 bits (888), Expect = 2e-93, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + +E + R +D+ D +SPDVI++ AA Sbjct: 1 MKVLVTGANGQLGYDVIKRLEEKKIEYLGTDRDTLDITNEDDVKRVIKDYSPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E+ ++N G I +A I IYISTDYVFDG P + N Sbjct: 61 YTAVDKAEDERELCHAVNVLGTRYIVEACKEIDAKMIYISTDYVFDGEGDKPFEVTDTPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++K GE +V + Y I+R +WV+ G+NF+ +MLRL KE EISVV DQ Sbjct: 121 PINYYGQTKYEGELEVQKLVDKYFIVRISWVFGSNGNNFVKTMLRLGKEIDEISVVADQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++++ +T GI+H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLAGLLLEMI-------ETDKYGIYHATNE-GYCSWYEFACEIFNQA----GM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-WKEGVRNILVNI 290 KV I T+ YPT+A RP S L L N++ W E +R + + Sbjct: 229 DVKVNPIKTEDYPTRAKRPKNSRLAKEDLVRN-NLKARNEWYEALRRYIDEL 279 >gi|294788795|ref|ZP_06754036.1| dTDP-4-dehydrorhamnose reductase [Simonsiella muelleri ATCC 29453] gi|294483277|gb|EFG30963.1| dTDP-4-dehydrorhamnose reductase [Simonsiella muelleri ATCC 29453] Length = 302 Score = 345 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 116/287 (40%), Positives = 167/287 (58%), Gaps = 5/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L + EI+ R +D+ F PDVIIN AAYT Sbjct: 14 KYLITGANGQVGSQLVAQLQGKAEILATDRNALDITDRASVLQIVNEFRPDVIINAAAYT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E +A +IN GA +A AA+ +G ++ISTDYVFDG P E P P Sbjct: 74 AVDKAESEANLAHAINCTGAENLAIAANEVGAIILHISTDYVFDGKGEKPYRETDPVAPQ 133 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+KLAGE V + ++ILRTAWV++ G+NF+ +M+RL K+R + +V DQFG+ Sbjct: 134 SVYGKTKLAGELAVQAACARHIILRTAWVFNEHGNNFIKTMIRLGKQRDTLGIVGDQFGS 193 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A IA A+I I+ L+ N+ G++H + VSW +FA IF ++ ++ Sbjct: 194 PTYAGDIANALILISEQLMNNNQ--NFGVYHFSG-SPYVSWFEFACEIFTQAQQQQILSQ 250 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + +I T+ YPT A RPA+S LDC K+ I+ S W+ + ++ Sbjct: 251 LPVLNKIATEDYPTPAFRPAHSRLDCGKIQAVFGIQPSDWQRALTDL 297 >gi|190150742|ref|YP_001969267.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307250738|ref|ZP_07532672.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307264144|ref|ZP_07545738.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915873|gb|ACE62125.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306857242|gb|EFM89364.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306870518|gb|EFN02268.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 291 Score = 345 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 121/287 (42%), Positives = 167/287 (58%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +I+ V R ++D+ K + F PDVIIN AA+T Sbjct: 3 RFLITGAKGQVGHCLTKQLQGKADILAVDREELDITKRDAVFNVVREFRPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ + ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEVELSEAINVKGPQYLAEAANEVDAIILHISTDYVFEGTGSGEYKENDEPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRL KER + +V DQFG Sbjct: 123 GVYGKTKLAGEIAVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGKERDVLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GGP 239 PT A IA+A+IQIA N I T + GI+H T VSWADFA IF E+ + Sbjct: 183 PTYAGDIAKALIQIA-NAIMGGRTDVFGIYHFTGK-PYVSWADFANAIFDEAVLQKVIEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA S LD +K+ I+ S W++ ++NI Sbjct: 241 APLVNFISTSDYPTPAKRPANSRLDLTKIDIVFGIKPSNWQQALKNI 287 >gi|117919829|ref|YP_869021.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117612161|gb|ABK47615.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 291 Score = 345 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 116/291 (39%), Positives = 167/291 (57%), Gaps = 7/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L + Q ++E + V R +D+ + F PD IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKLLNQIPEIEFLAVDREQLDITDYEAVNKLVSEFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +A+AA+S+G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAQAANSVGATILHISTDYVFAGDKVGEYVETDEV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P IYGKSKLAGE VA+ ++I+RTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGIYGKSKLAGELAVAAACPRHIIMRTAWVFCETGNNFIKTMLRLAQSRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA +I+IA L + + GI+H + VSW F+ IF ++ + Sbjct: 181 FGGPTYAGDIANTLIEIAQALYAGN--THYGIYHFSG-LPHVSWYQFSCQIFKQAKAQKL 237 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I ++QYPT RPA S L C K+ T ++ W+ + N++ Sbjct: 238 VSKDMLINGISSEQYPTPVKRPANSKLSCRKIEQTFGVKPCDWQSALNNLM 288 >gi|315649764|ref|ZP_07902847.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus vortex V453] gi|315274738|gb|EFU38119.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus vortex V453] Length = 294 Score = 345 bits (887), Expect = 3e-93, Method: Composition-based stats. Identities = 103/293 (35%), Positives = 173/293 (59%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ Q ++++ + +II GR ++D+ + S +PD II+ AA Sbjct: 1 MKVLVTGANGQLGQDVTNVLAEAGYQIIGCGRAELDITNMELCEQVISSHNPDFIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +N G IA +A+ IG +YISTDYVF+G S T E+ T+ Sbjct: 61 YTAVDAAETDTDGAYRVNTLGTRNIAVSAEKIGAAVVYISTDYVFNGTSETAYVEYDDTD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKLAGE+ + + + + I+RT+WV+ + G+NF+ +MLRL +E+ ++ VV DQ Sbjct: 121 PQTIYGRSKLAGEQMLRDFCSKWFIVRTSWVFGLHGNNFVKTMLRLGQEKPQLKVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A+ ++ + T G++H ++ G +W +F + IF E+ E+ G Sbjct: 181 GSPTYTVDLAQFLLNLI-------STEKYGLYH-ASNSGSCTWYEFTQAIFEEAREQLGL 232 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ T ++P A RPA S +D + + W+EG++ +V++ Sbjct: 233 EIMAELQPCTTAEFPRPAPRPANSTMDHLAIRLNQLEDLPHWREGLKQFMVDM 285 >gi|261822265|ref|YP_003260371.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium wasabiae WPP163] gi|261606278|gb|ACX88764.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium wasabiae WPP163] Length = 281 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 121/289 (41%), Positives = 168/289 (58%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + EI+ ++D+ F P+ I+N AAY Sbjct: 1 MKILLTGAKGQLGRCFQDRLPIGWEILATDAAELDITDLACVEQVVQDFQPNAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A AA+ G I++STDYVFDG + P +E S TNP Sbjct: 61 TAVDKAESEPELAERINVIGPMNLAIAANKQGTRLIHVSTDYVFDGNATEPYNEDSATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAGE+ VA N +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGKTKLAGEQAVAQTVPNSIIVRTAWVFSEYGNNFVKTMLRLAKERDTLSIVNDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A+AII + E GI+H D VSW +FAE IF +A++ Sbjct: 181 CPTYAGDLAQAIISLLEKNTEG------GIYHYCGDR-EVSWYEFAESIFAIAADKSLLI 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A+RPA+S L C K+ I +S W++ ++ + Sbjct: 234 DIPSLKAISTTDYPTPAYRPAFSTLSCDKVKK-LGISLSGWEKALQKTI 281 >gi|237713729|ref|ZP_04544210.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409365|ref|ZP_06085908.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|293371466|ref|ZP_06617889.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|298482894|ref|ZP_07001076.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] gi|229446176|gb|EEO51967.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352817|gb|EEZ01914.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|292633569|gb|EFF52129.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|298270866|gb|EFI12445.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] Length = 288 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 169/292 (57%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTAHTPYTEDCNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YSIFG+NF+ +MLRL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSIFGNNFVKTMLRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYAIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|283798824|ref|ZP_06347977.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|291073511|gb|EFE10875.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|295092684|emb|CBK78791.1| dTDP-4-dehydrorhamnose reductase [Clostridium cf. saccharolyticum K10] Length = 281 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + E + V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVVNELKKRGHEAVGVDVEEMDITDGQACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED ++ +NA+G IA + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNVDLCRRVNADGTRNIAAVCRDLDIKMMYISTDYVFNGQGLRPWEPDDERE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + I+R AWV+ + G NF+ +MLRL KE +SVV DQ Sbjct: 121 PLNVYGQTKCEGEMAVEELVKKFFIVRIAWVFGVNGKNFIKTMLRLGKENGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + ++ G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMI-------ESEKYGRYHATNE-GLCSWYEFASEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + ++ KA RP S +D SKLA + W++ + L I Sbjct: 230 QVKVTPVTSDEFKAKAKRPMNSRMDKSKLAANGFEPLPAWQDALSRYLKEI 280 >gi|295110611|emb|CBL24564.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum A2-162] Length = 282 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 151/292 (51%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + E + V ++D+ PD +++ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGYEGVGVDVAEMDITDSAAVEKVMTEVHPDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP-T 118 +TAVD AED E+ +N +G IAK + IP +YISTDYVFDG P + P Sbjct: 61 WTAVDAAEDNQEVCHRVNVDGTANIAKMCGKLDIPMVYISTDYVFDGQGTRPWEPDDPVV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG SK GE V Y +Y I+R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 EPLNVYGHSKYEGEVAVEKYAPHYYIVRIAWVFGLNGKNFIKTMLNLGKTHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ + + G +H T +GG +SW DFA+ IF ++ G Sbjct: 181 IGTPTYTYDLARLLVDML-------EKEEYGKYHATNEGGYISWCDFAKEIFRQA----G 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP+ S ++ KL R+ WK+ + L I Sbjct: 230 MDVKVMPVSSAEYPAKAKRPSNSRMEKKKLEEHGFTRLPDWKDALGRYLKEI 281 >gi|298368476|ref|ZP_06979794.1| dTDP-4-dehydrorhamnose reductase [Neisseria sp. oral taxon 014 str. F0314] gi|298282479|gb|EFI23966.1| dTDP-4-dehydrorhamnose reductase [Neisseria sp. oral taxon 014 str. F0314] Length = 287 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 167/289 (57%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+AQ E+I +D+ + +F PD I+N AAY Sbjct: 1 MRILLTGSKGQLAQCFRDRLPDKWEVISTDSASLDITDATAVFNMVQNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E AF++NA +A AA + I+ISTDYVF+G + P E NP Sbjct: 61 TAVDKAEREYRKAFAVNASAVHNLAAAAYEAKVRFIHISTDYVFEGDGKNPYSEHDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYGKSKL+GE + +++RTAW++S +G NF+ +MLRLAKER +SVV DQ G Sbjct: 121 QSIYGKSKLSGEFLALAANPESIVVRTAWLFSEYGENFVKTMLRLAKERDTLSVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RGG 238 PT A +A+A+I I S RG++H D VSW +FA+ IF ++E +G Sbjct: 181 NPTYAGDLAQALIDILK-----SAGPARGVYHFCGDKS-VSWYEFAQAIFQTASENIKGF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I ++QYPT A RPAYS LDC K+ ++ S W++ + +I+ Sbjct: 235 KVPELKPIPSEQYPTPAPRPAYSVLDCGKINRDFGVKTSDWQKALGSII 283 >gi|167765913|ref|ZP_02437966.1| hypothetical protein CLOSS21_00404 [Clostridium sp. SS2/1] gi|167712411|gb|EDS22990.1| hypothetical protein CLOSS21_00404 [Clostridium sp. SS2/1] gi|291559811|emb|CBL38611.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SSC/2] Length = 281 Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ + + Q +E I V ++D+ +PD +I+ AA Sbjct: 1 MRVFVTGVKGQLGYDVMNELEKQGLEGIGVDIDEMDITDADQVNKVIKEAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NA+G IAK + + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNEEICRKVNAQGTENIAKVCEELDIKMMYISTDYVFNGQGERPWEPDDKRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + +R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEEHVKKFFTVRIAWVFGVNGKNFIKTMLNLGKTHDHLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GICTWYEFACEIFKQA----GM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP+ S +D SKL + TW++ + L I Sbjct: 229 NVSVAPVSSDEYPAKAKRPSNSRMDKSKLTANGFTPLPTWQDALSRYLKEI 279 >gi|170724102|ref|YP_001751790.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169762105|gb|ACA75421.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 286 Score = 345 bits (885), Expect = 6e-93, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 176/288 (61%), Gaps = 2/288 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+NGQ+AQ+L + E+ +GR +DL +P+ +P++IIN AAY Sbjct: 1 MRVLVCGHNGQVAQALKTQLAGLGEVHLLGRDQLDLAQPEALREPLRQLAPELIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ AF+INA+ G +A+ A +G P I+ STDYVFDG P E NP Sbjct: 61 TAVDQAESEPDTAFAINAQAPGVLAEEALRLGAPLIHYSTDYVFDGEKAAPYTEQDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SKLAGE+ +A+ ++ILRT+WVYS+ G NFLL+M RL +E+ ++ VV DQ G Sbjct: 121 LGVYGRSKLAGEQAIAAVGGAHLILRTSWVYSLHGRNFLLTMQRLLQEKPQLRVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA + + + G +H+TA G SW FA+ I + RG P Sbjct: 181 APTWASTIALSTRALIERW-QAGRAGAWGTYHLTAQ-GQTSWFGFAQAIGEQLKARGLPC 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +++ I + +YPT A RPA S LDCS+LA ++ + W++ + + L Sbjct: 239 AELLPIPSSEYPTPARRPANSRLDCSRLAREWDVTLPHWQQALIDCLK 286 >gi|227113155|ref|ZP_03826811.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 281 Score = 344 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 121/289 (41%), Positives = 170/289 (58%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + + EI+ ++D+ + A SF PD I+N AAY Sbjct: 1 MKILLTGANGQLGRCFQDRLPAEWEILATDSNELDITDLERVAEVVKSFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPEIA SIN G +A A + +++STDYVFDG + P +E S TNP Sbjct: 61 TAVDKAESEPEIAESINVHGPQNLAIVATKYNVRLVHVSTDYVFDGSATEPYNEDSATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KLAGE+ V + +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGNTKLAGEQAVTKISPEAIIVRTAWVFSEYGNNFVKTMLRLAKERDSLSIVNDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RGG 238 PT A +A+AII + ++ GI+H D VSW +FAE IF +A+ R Sbjct: 181 CPTYAGDLAQAIISLLEK------NAVGGIYHYCGDE-EVSWYEFAESIFTIAADKSRLI 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T YPT A+RPAYS L C ++ I +S W+ ++ + Sbjct: 234 DIPSLKPIPTTDYPTPAYRPAYSTLACDRVKK-LGISLSRWENALQKTI 281 >gi|319902878|ref|YP_004162606.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] gi|319417909|gb|ADV45020.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] Length = 284 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 158/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ ++D+ + +F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSQENFQHTYYFTDVQELDICDEQAVHTFVADHQVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG P E P Sbjct: 61 AYTAVDKAEDNVELCDKLNHLAPGYLAAAAEARGAVLIQVSTDYVFDGTGHLPYTEDMPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +I+RTAW+YS++G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMKNCSRAMIIRTAWLYSVYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +AR I + I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLARVIFTAVNRGI------VPGIYHFS-DEGVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD SK+ T I I W++ ++ + + Sbjct: 231 TTCKVSPLHTDEFPAKAPRPHYSVLDKSKIKKTFGIEIPHWEDSLQACIEEL 282 >gi|295115902|emb|CBL36749.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SM4/1] Length = 281 Score = 344 bits (883), Expect = 8e-93, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 149/291 (51%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + E + V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVVNDLKKRGHEAVGVDVEEMDITDGQACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED ++ +NA+G IA + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNVDLCRRVNADGTRNIAAVCRDLDIKMMYISTDYVFNGQGLRPWEPDDERE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + I+R AWV+ + G NF+ +MLRL KE +SVV DQ Sbjct: 121 PLNVYGQTKCEGEMAVEELVKKFFIVRIAWVFGVNGKNFIKTMLRLGKENGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + ++ G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMI-------ESEKYGRYHATNE-GLCSWYEFASEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + ++ KA RP S +D SKLA + W++ + L I Sbjct: 230 QVKVTPVTSDEFKAKAKRPMNSRMDKSKLAANGFEPLPAWQDALSRYLKEI 280 >gi|15895582|ref|NP_348931.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium acetobutylicum ATCC 824] gi|15025322|gb|AAK80271.1|AE007732_5 DTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium acetobutylicum ATCC 824] gi|325509731|gb|ADZ21367.1| DTDP-4-dehydrorhamnose reductase [Clostridium acetobutylicum EA 2018] Length = 280 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 158/288 (54%), Gaps = 14/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + + ++VE+I D+D+ FF P+V+IN AA Sbjct: 1 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDK E++ ++A+ INA G +A AA S+G + ISTDYVFDG ++ PI EF N Sbjct: 61 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YGK+KL GE V + Y I+RTAW+Y G+NF+ +M+ L K E+ VV DQ Sbjct: 121 PQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVHDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPTS + +AR ++++ D G FH T G SW DFA IF + G Sbjct: 180 GTPTSTVDLARVVLKVI-------DEKNYGTFHCTCK-GICSWYDFAVEIFRLT----GI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV T+++P A RP YS L L T WKE ++ + Sbjct: 228 DVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWKESLKEYI 275 >gi|29726030|gb|AAO88955.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 291 Score = 344 bits (883), Expect = 9e-93, Method: Composition-based stats. Identities = 119/290 (41%), Positives = 165/290 (56%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L + ++E + V R +D+ F PD IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKQLTELSEIECLAVDRDQLDITDRDAVNKLVNEFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN G +++AA+S+G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRYGPEYLSQAANSVGASILHISTDYVFAGDKEGAYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKLAGE+ VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGVYGHSKLAGEQAVAAACPRHIILRTAWVFCETGNNFVKTMLRLAQSRDELRVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+I ++ L +S GI+H VSW FA IF ++ + Sbjct: 181 FGGPTYAGDIANALIVMSVAL--HSGNGHYGIYHFAGK-PHVSWFQFACQIFKQAKAQKL 237 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I + QYPT A RPA S LDC K+ T I S W+ ++N+ Sbjct: 238 FSKDIQVNAITSDQYPTPAKRPANSKLDCHKIEQTFCITPSDWQAALKNL 287 >gi|294644907|ref|ZP_06722643.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294808802|ref|ZP_06767532.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|292639720|gb|EFF58002.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294443974|gb|EFG12711.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 288 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 167/292 (57%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTVHTPYTEDCDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YS FG+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ L+ + Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCLIKL 282 >gi|74317795|ref|YP_315535.1| dTDP-4-dehydrorhamnose reductase [Thiobacillus denitrificans ATCC 25259] gi|74057290|gb|AAZ97730.1| dTDP-4-dehydrorhamnose reductase [Thiobacillus denitrificans ATCC 25259] Length = 297 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 154/290 (53%), Gaps = 5/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G NGQ+ L E++ + ++L P+ + +P +I+NPAAYT Sbjct: 4 RILLTGPNGQVGWELQRTLGSLGEVVALDSSALNLADPRQVRETVRALAPRIIVNPAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A ++N +A+ A + ++ STDYVF+G P E P +PL Sbjct: 64 AVDKAESEPELARAVNVVAPALLAEEAHRLDALLVHYSTDYVFNGSGSRPWREDDPCDPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG +KL GE + ++I RT+WVY GSNFLL+M RL +ER E+ +V DQ G Sbjct: 124 NVYGATKLEGERAIQESGCRHLIFRTSWVYGARGSNFLLTMTRLMRERPELKIVADQMGA 183 Query: 182 PTSALQIARAIIQIAHNLIENS----DTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT +A A QI L D + G++H A+GG SW FAE I E Sbjct: 184 PTWCRDLAEATAQILSQLCAPQTRLTDPAPWGVYH-AANGGETSWHGFAEAIQRLEGEGP 242 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++++ I + YPT A RP S LD KLA +R+ W+ + L Sbjct: 243 AAHARLLPIPSSDYPTPARRPLNSRLDSDKLARVFGLRLPDWRVALALCL 292 >gi|307246378|ref|ZP_07528454.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255364|ref|ZP_07537174.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259814|ref|ZP_07541532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852711|gb|EFM84940.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861673|gb|EFM93657.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866112|gb|EFM97982.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 291 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 117/287 (40%), Positives = 164/287 (57%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +++ V R ++D+ F+P+VIIN AA+T Sbjct: 3 RFLITGAKGQVGYCLTKQLQSKADVLAVDRDELDITNRDAVFKIVREFNPNVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ I ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEIELSEAINVKGPQYLAEAANEIDAVILHISTDYVFEGTGSGEYKEDDKPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRL KER + +V DQFG Sbjct: 123 GVYGKTKLAGERVVQQANKKHIILRTAWVFGEHGNNFVKTMLRLGKERESLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+IQIA+ ++ N GI+H T VSWADFA IF E+ + Sbjct: 183 PTYAGDIANALIQIANTIL-NGKQDAFGIYHFTGK-PYVSWADFANTIFNEAVSQKVLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA S LD +K+ I+ S W+ ++NI Sbjct: 241 APLVNFISTSDYPTPAKRPANSRLDLTKIDAVFGIKPSDWQRALKNI 287 >gi|225016239|ref|ZP_03705431.1| hypothetical protein CLOSTMETH_00142 [Clostridium methylpentosum DSM 5476] gi|224950997|gb|EEG32206.1| hypothetical protein CLOSTMETH_00142 [Clostridium methylpentosum DSM 5476] Length = 296 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 156/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+ GQ+ LS + Q ++ V ++D+ +F Sbjct: 1 MKLLITGSKGQLGNELSKILASGESELGRLPEEVQGCKVTAVDVDELDITDMAAVDTFLQ 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T V+ E ++A +NA GA +A+ + IG +++STDYVF G Sbjct: 61 KERPDVLINCAAMTNVNGCESSQDVAMKVNAIGARNLARGCEQIGCKLVHVSTDYVFSGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP ++YG SKL GE+ V + Y I+RTAW+Y G NF+ ++ +LA+ Sbjct: 121 GDRPYVEWDVCNPQSVYGTSKLLGEQYVRDFCTRYFIVRTAWLYGYVGGNFVKTISKLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER E+ VV DQ G PT+A+ +A ++++A T G++H T G SW DFA Sbjct: 181 ERGEVKVVSDQRGNPTNAVDLAYHLVRLAV-------TEEYGVYHCTG-TGECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I G +KV T++YPT A RP+YS LD L T + WK+ ++ + Sbjct: 233 EII----RLFGIDAKVNPCTTEEYPTPAKRPSYSSLDNMMLRCTIGDEMRDWKDALKAFV 288 Query: 288 VN 289 + Sbjct: 289 EH 290 >gi|160888769|ref|ZP_02069772.1| hypothetical protein BACUNI_01187 [Bacteroides uniformis ATCC 8492] gi|317479486|ref|ZP_07938618.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] gi|156861668|gb|EDO55099.1| hypothetical protein BACUNI_01187 [Bacteroides uniformis ATCC 8492] gi|316904386|gb|EFV26208.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 284 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ + ++D+ + F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSKENGQHAYFFTDVQELDICDEQAVHGFVKDNRIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG TP E + T Sbjct: 61 AYTAVDKAEDNQELCDKLNHVAPGYLAAAAEACGAALIQVSTDYVFDGTGHTPYTEEAAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V Y + +I+RTAW+YSI+G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLAGEQAVMKYCSRAMIIRTAWLYSIYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAISQGI------VPGIYHFSNE-GVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD +K+ T I I W+ + + N+ Sbjct: 231 KSCKVSPLHTDEFPAKAPRPHYSVLDKTKIKKTFGIDIPHWEASLAVCMKNL 282 >gi|315921705|ref|ZP_07917945.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695580|gb|EFS32415.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 283 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 162/289 (56%), Gaps = 12/289 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +V G NGQ+ + + ++ ++++ + ++ ++++N AAYT Sbjct: 1 MVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E P Sbjct: 61 AVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDPCPD 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KL GE V +Y V++RTAW+YSIFG+NF+ +M+RL KER + VV DQ GT Sbjct: 121 SVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSIFGNNFVKTMIRLGKERDSLGVVFDQIGT 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 PTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GITSC 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L + Sbjct: 231 KVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCLEKL 279 >gi|299149344|ref|ZP_07042401.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] gi|298512531|gb|EFI36423.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] Length = 286 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 168/292 (57%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ + ++ ++++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICDKQAVWTYMAEKQIELVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A+ +N E +A AA + G I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNQELAYKLNCEAPKQLASAAQANGAAMIQVSTDYVFDGTAHTPYTEDCNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V ++ V++RTAW+YSIFG+NF+ +MLRL KER + VV DQ Sbjct: 121 CPDSVYGTTKLEGEKEVMNHCEQAVVIRTAWLYSIFGNNFVKTMLRLGKERDSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYAIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T +I I W+E ++ + I Sbjct: 231 TTCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFDIEIPHWEESLKQCIDKI 282 >gi|1314582|gb|AAC44075.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. S88] Length = 288 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 131/290 (45%), Positives = 183/290 (63%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQ+L + E+I P+ DL KP+ + P++I++ AAY Sbjct: 1 MRILVTGHDGQVAQALGEQ-AEGHELIFTSYPEFDLSKPETIEAAVAKIQPELIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A +IN +G G +A+A IG P I++STDYVFDG P E PT P Sbjct: 60 TAVDKSESEPELAMAINGDGPGVLARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDTLNVVEDQQG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+++ + +N TS G++H T G +WADFA IF ESA+ GGP Sbjct: 180 CPSSALDIATAILKVVGHWQQNGATS--GLYHFTG-SGETNWADFARAIFAESAKHGGPT 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T YPT A RPA S L+C K A T R W++ V ++ + Sbjct: 237 AEVTGIPTSGYPTPAKRPANSRLNCDKFAETFGYRAPAWQDSVAEVVGRL 286 >gi|255693796|ref|ZP_05417471.1| dTDP-4-dehydrorhamnose reductase [Bacteroides finegoldii DSM 17565] gi|260620419|gb|EEX43290.1| dTDP-4-dehydrorhamnose reductase [Bacteroides finegoldii DSM 17565] Length = 286 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 165/289 (57%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ + ++D+ + S+ DVI+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHLYYFTDVQELDICDKEAVWSYISEKQIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+A +N+ G +A+AA + I +STDYVFDG + TP E Sbjct: 61 AYTAVDKAEDNRELAHKLNSVAPGILARAAQANNAAMIQVSTDYVFDGTAHTPYAEECKP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG +KL GE++V + V++RTAW+YSI+G+NF+ +M+RL KER + VV DQ Sbjct: 121 CPDSIYGSTKLEGEQEVMDHCEKAVVIRTAWLYSIYGNNFVKTMIRLGKERDGLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T +YP KA+RPAYS LD +K+ T I I W+E + + Sbjct: 231 TSCKVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLERCI 279 >gi|154505979|ref|ZP_02042717.1| hypothetical protein RUMGNA_03521 [Ruminococcus gnavus ATCC 29149] gi|153793478|gb|EDN75898.1| hypothetical protein RUMGNA_03521 [Ruminococcus gnavus ATCC 29149] Length = 282 Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + + E + V ++D+ S D +++ AA Sbjct: 1 MRALVTGVKGQLGHDVMNELAKRGYEGVGVDVEEMDITDAAAVDSVIREAKVDSVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PT 118 +TAVD AED E+ +NAEG IAK ++ IP IYISTDYVF+G P + T Sbjct: 61 WTAVDAAEDNEEMCRKVNAEGTENIAKVCKALDIPMIYISTDYVFEGEGTRPWEPDDNVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLNIYG++K GE+ V + Y I+R AWV+ + G NF+ +ML L + ++VV DQ Sbjct: 121 QPLNIYGQTKYEGEQAVERLLDKYYIVRIAWVFGVNGKNFIKTMLNLGETHDTLTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT +AR ++ + + G +H+T +GG ++W +FA+ IF ++ G Sbjct: 181 VGTPTYTYDLARLLVDML-------EKDAYGKYHVTNEGGYITWYEFAKEIFAQA----G 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + ++P KA RP S +D SKL + TW++ ++ L I Sbjct: 230 MDVNVVPVTSDKFPAKAKRPHNSRMDKSKLKKNGFTPLPTWQDALKRYLSEI 281 >gi|294673013|ref|YP_003573629.1| dTDP-4-dehydrorhamnose reductase [Prevotella ruminicola 23] gi|294472332|gb|ADE81721.1| dTDP-4-dehydrorhamnose reductase [Prevotella ruminicola 23] Length = 285 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 158/290 (54%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ + + ++ ++D+ + F D I+N A Sbjct: 1 MRILITGCNGQLGNEMQLLEKENQQHTYFNTDVAELDITDEEAINRFVTDNEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+ E+ +NA G +AKA + G I ISTDYVFDG + P E Sbjct: 61 AYTAVDKAEENQELCHKLNATAPGLLAKAIEKRGGWMIQISTDYVFDGTNHRPYTEDESV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++KL GE++V + +I+RTAW+YS FG+NF+ +M+RL KE+ E+ V+ DQ Sbjct: 121 CPNSTYGRTKLEGEQEVTNGCKRSMIIRTAWLYSTFGNNFVKTMIRLGKEKPELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I + GI+H + + G +SW DF + I + G Sbjct: 181 IGTPTYARDLAVAIFAAINQGI------VPGIYHFSNE-GVISWYDFTKAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T +YPT A RP YS LD +K+ T+NI I W+E + + Sbjct: 231 NTCHVRPLHTSEYPTPAARPHYSVLDKTKIKQTYNIEIPYWEESLAECIA 280 >gi|308071019|ref|YP_003872624.1| spore coat polysaccharide biosynthesis protein spsK [Paenibacillus polymyxa E681] gi|305860298|gb|ADM72086.1| Spore coat polysaccharide biosynthesis protein spsK [Paenibacillus polymyxa E681] Length = 290 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 165/292 (56%), Gaps = 11/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ + + + + +++ R +D+ + + PD +I+ AA Sbjct: 1 MKVLVTGASGQLGKDVVKVFQEQGHDVLGYDREQLDITDLQQTVKIVGQYQPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G +A A + +G +YISTDYVFDG ++ P E+ TN Sbjct: 61 YTAVDAAETDVDGAYQVNAAGTRNMALATEKVGAKLVYISTDYVFDGTAKEPYHEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSK AGE + ++ Y I+RT+WVY ++G+NF+ +ML+L +E+ + VV DQ Sbjct: 121 PQSIYGKSKRAGEVLTQTLSSRYFIVRTSWVYGLYGNNFVKTMLKLGQEKPLLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--G 237 G+PT + +AR + ++ T GI+H ++GG +W +F + I ++AE Sbjct: 181 GSPTYTVDLARFLAELIQ-------TEKYGIYH-ASNGGSCTWYEFTQAILQDAAEILDA 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +K+ T+Q+P A RP S ++ + + W+EG+R+ L Sbjct: 233 KITAKLEPCSTEQFPRPAARPRNSVMEHIAIRTNGLNDLRDWREGLRDFLQE 284 >gi|91794012|ref|YP_563663.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] gi|91716014|gb|ABE55940.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] Length = 291 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 168/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ L + D+ + + R +D+ + + F PD+IIN A Sbjct: 1 MRILITGKNGQVGSCLVELLDAETDLTFLALDREQLDITDANEVSKVVAEFKPDIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE E E+A++IN +G +A AA+ + I++STDYVF G S E T Sbjct: 61 AYTAVDRAEKECELAYAINRDGPYNLALAANDVNALIIHLSTDYVFSGNSSESYVESDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG+SKLAGE+ V + ++ILRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 121 GPQSEYGRSKLAGEQAVVLACSRHIILRTAWVFGEHGNNFVKTMLRLAKTRDTLDVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA+AI+ I++ +++ + G++H + VSW DFA+ IF + ++G Sbjct: 181 FGGPTYAGDIAKAILAISNQVMKGNQA--YGVYHYSG-FPHVSWYDFAKTIFSTALQQGF 237 Query: 239 P--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T Y T A RPA S LDC K+ I S W+ ++ I Sbjct: 238 LKNTIQVRPITTLDYLTPAKRPANSRLDCHKINIAFVIEQSDWQSALKQI 287 >gi|152978506|ref|YP_001344135.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus succinogenes 130Z] gi|150840229|gb|ABR74200.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus succinogenes 130Z] Length = 291 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 121/287 (42%), Positives = 171/287 (59%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L+ EI+ V R +D+ + +SF PDVIIN AA+T Sbjct: 3 KFLITGAKGQVGYCLTQQLTGKAEILAVDRDGLDITDQSAVRNAVISFQPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ IG ++ISTDYVF+G E TNP Sbjct: 63 AVDRAETEVELSEAINVKGPQYLAEAANEIGAAILHISTDYVFEGNGTNEYQEDDQTNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KLAGE V +++LRTAWV+ G+NF+ +M+RL KER + VV DQFG Sbjct: 123 GVYGRTKLAGEIAVQQANPKHIVLRTAWVFGERGNNFVKTMIRLGKEREVLGVVGDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+I IA+ +I N T + G++H T VSWA+FA+ IF E+ + Sbjct: 183 PTYAGDIAAALIHIANEII-NGKTDVFGVYHFTGK-PYVSWAEFAKAIFNEAVSQKILEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T +YPT A RPA S L+ K+ T I+ S W++ ++NI Sbjct: 241 SPLVNAIATHEYPTPAKRPANSRLNLDKIDRTFGIKPSDWQKALKNI 287 >gi|160935033|ref|ZP_02082419.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753] gi|156866486|gb|EDO59858.1| hypothetical protein CLOLEP_03909 [Clostridium leptum DSM 753] Length = 295 Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 24/303 (7%) Query: 1 MKCLVIGNNGQIAQSLSS-------------MCVQDVEIIRVGRPDIDLLKPKDFASFFL 47 M LV G GQ+ L C D ++ + D+D+ + ++ Sbjct: 1 MNVLVTGCKGQLGNELYKIITEKKSELGEIPQCFHDCKLTCIDVEDLDITDLEAVQAYTR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P+V+IN AAYT V+ E + + AF +NA G +A A + G +++STDYVF G Sbjct: 61 TLRPEVVINCAAYTNVNGCESDRDAAFRVNALGPRNLAVACEETGAKLVHVSTDYVFPGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P ++YG++K GE+ V + + Y I+RTAW+Y G+NF+ +M RL Sbjct: 121 GTEPYVEWDLCGPQSVYGRTKYLGEQYVRDFCSRYFIVRTAWLYGYVGNNFVKTMRRLGT 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ GTPT+A +AH+L++ + T G++H T +G SW +F + Sbjct: 181 EKGAVKVVSDQVGTPTNAAD-------LAHHLLKLAATCEYGVYHCTGNGPACSWYEFTK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I S G + V T++YPT A RPAYS LD L T + W+E ++ + Sbjct: 234 KIMEYS----GISAAVTPCTTEEYPTPAKRPAYSVLDNCMLRVTVGDEMRDWQEALKCYI 289 Query: 288 VNI 290 I Sbjct: 290 EKI 292 >gi|198277052|ref|ZP_03209583.1| hypothetical protein BACPLE_03260 [Bacteroides plebeius DSM 17135] gi|198269550|gb|EDY93820.1| hypothetical protein BACPLE_03260 [Bacteroides plebeius DSM 17135] Length = 285 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 157/291 (53%), Gaps = 12/291 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + + ++ E ++D+ + F + DVI+N AA Sbjct: 3 KILVTGANGQLGNEMRLLAEKHRNFEYFFTDVAELDICDEQAVMEFVSAHQIDVIVNCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED E+ +N G +AKAA S + +STDYVFDG + P E Sbjct: 63 YTAVDKAEDNVELCDKLNHVAPGYLAKAAQSRNGWLVQVSTDYVFDGTAHVPYKEEDTPC 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KLAGE++ N +++RTAW+YS FG+NF+ +M+RL +E+ + V+ DQ Sbjct: 123 PNSVYGSTKLAGEQEALKQCPNTMVIRTAWLYSTFGNNFVKTMIRLGQEKETLGVIFDQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A+AI I + GI+H + + G SW DF + I + G Sbjct: 183 GTPTYARDLAQAIFVALEKGI------VPGIYHFSNE-GVCSWYDFTKAIHRLA---GIT 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T+ YPTKA RP YS LD +KL T+ + + W + + + + Sbjct: 233 TCHVSPLHTEDYPTKACRPHYSVLDKTKLKKTYGVEVPYWMDSLAECIEKL 283 >gi|282898611|ref|ZP_06306599.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] gi|281196479|gb|EFA71388.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Cylindrospermopsis raciborskii CS-505] Length = 303 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 173/302 (57%), Gaps = 16/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ L + ++I +GR ++DL + + S PD+I+NPAAY Sbjct: 1 MKILLTGISGQVGWELQRSLMTVGDVICLGRNELDLSRYETIPSTIREIKPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A SIN G +A+ A +G ++ STDYVFDG TP E PT P Sbjct: 61 TAVDRAELEPDLAMSINGVAPGILAEEAKRLGAAIVHYSTDYVFDGNQNTPYKENDPTFP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YGK+KLAGE+ + + N++I RT+WVY + G NFLL+M RLAKER EI VV DQ G Sbjct: 121 QNVYGKTKLAGEKSIQAVGTNHLIFRTSWVYGLRGKNFLLTMQRLAKEREEIRVVDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNL-----------IENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +PT + IA QI + + + GI+H++ GG SW FA+ I Sbjct: 181 SPTWSRMIAEVTAQIIAQIRGQMVISGTSYLADFMAEKGGIYHLSC-GGKTSWYGFAKAI 239 Query: 230 ----FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 F + ++ I T +YPT A RP+YS LD KL +T ++IS W+E + Sbjct: 240 LIDKFADDQYGQYKLQRLVPITTPEYPTPAPRPSYSLLDNQKLLDTFGLKISNWQEVLDL 299 Query: 286 IL 287 L Sbjct: 300 AL 301 >gi|261409576|ref|YP_003245817.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. Y412MC10] gi|261286039|gb|ACX68010.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. Y412MC10] Length = 292 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 100/293 (34%), Positives = 166/293 (56%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + S+ +++ GR ++D+ + + PD II+ AA Sbjct: 1 MKVLVTGAQGQLGKDVVSIFKGSKHDVLGCGRNELDINNLEQCHKIIKEYQPDCIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ INA G +A AA+S+G IYIS+DYVF+G S P E+ T+ Sbjct: 61 YTAVDAAESDSDQAYQINAIGTRNLAIAAESVGSKLIYISSDYVFNGRSDYPYVEYDRTD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSKLAGE + + + I+RT+W + + G+NF+ +MLRL +ER + VV DQ Sbjct: 121 PQSVYGKSKLAGEILTQTLCSKWFIVRTSWAFGLNGNNFVKTMLRLGQERTSLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A ++++A DT G++H ++ G +W +F + IF E+ + G Sbjct: 181 GSPTFTIDLASFLLELA-------DTEKYGVYH-ASNQGECTWYEFTQAIFQEARKELGL 232 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ T Q+P A RPA S L+ + + W++ ++ + + Sbjct: 233 PIKAELSPCTTDQFPRAAPRPANSVLEHMSIRTNGFADLPHWQDALKRFIAKM 285 >gi|237723307|ref|ZP_04553788.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447829|gb|EEO53620.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 283 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 161/289 (55%), Gaps = 12/289 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +V G NGQ+ + + ++ ++++ + ++ ++++N AAYT Sbjct: 1 MVTGANGQLGNEMQVLAKENPQHTYYFTDVEELNICDKQAVWAYIAEKRIELVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED E+A+ +N E +A AA G I +STDYVFDG + TP E P Sbjct: 61 AVDKAEDNSELAYQLNCEAPKQLASAAQFNGAAMIQVSTDYVFDGTAHTPYTEDCDPCPD 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +KL GE V +Y V++RTAW+YS FG+NF+ +M+RL KER + VV DQ GT Sbjct: 121 SVYGTTKLEGEYDVMNYCEKAVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVVFDQIGT 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +ARAI I + I +RGI+H + + G SW DF I + G Sbjct: 181 PTYANDLARAIYTIINKGI------VRGIYHFSNE-GVCSWYDFTVAIHRLA---GITSC 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA+RPAYS LD +K+ T I I W+E ++ L + Sbjct: 231 KVKPLHTAEYPAKANRPAYSVLDKTKIKTTFGIEIPHWEESLQRCLEKL 279 >gi|1944161|dbj|BAA19635.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans] Length = 292 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 121/287 (42%), Positives = 166/287 (57%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGKHEILAVDHDELDITNQNAVKKTVENFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+ A S+G ++ISTDYVFDG E +P Sbjct: 63 AVDRAETEIELSEAINVKGPQYLAETAKSVGAAILHISTDYVFDGRRAGKYKETDAVDPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ GSNF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGSNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+IQIA +I ++ GI+H T + VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIA-GESVEYGIYHFTGE-PYVSWCDFARAIFDEAVSQNMLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 APLVNAIITADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|169831836|ref|YP_001717818.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis audaxviator MP104C] gi|169638680|gb|ACA60186.1| dTDP-4-dehydrorhamnose reductase [Candidatus Desulforudis audaxviator MP104C] Length = 285 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 155/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G + +++++ + ++R+GR D+D+ S + PD ++N AA Sbjct: 1 MRVLVTGAQGMLGRAVAAEAGARGWAVVRLGRTDLDITDLTAVRSALREYRPDAVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E AF++N G +A A G+ ++ISTDY+FDG P + Sbjct: 61 YTDVDGAETARERAFAVNGLGPRNLALACRETGVDLLHISTDYIFDGRKDGPYGVYDDPC 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKL GE +AS + + I+R +W+++ +G NF+ +MLRL +ER + VV DQ+ Sbjct: 121 PVNVYGASKLWGERAIASLASRFYIVRVSWLFAPWGKNFVATMLRLGRERESLRVVDDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +AR ++ + T G++H T + G SW FA I ++ G Sbjct: 181 GCPTYAPDLARLLLDLIA-------TRCYGVYHAT-NQGVTSWCGFARAIMKQA----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V + ++P A RPA S LD L T + W++ + L + Sbjct: 229 PARVEPCTSAEFPRPARRPANSVLDPFPLRETVGYLLPPWEDALERCLKEM 279 >gi|303252479|ref|ZP_07338643.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248514|ref|ZP_07530532.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648680|gb|EFL78872.1| hypothetical protein APP2_1455 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854990|gb|EFM87175.1| dTDP-4-dehydrorhamnose reductase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 291 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 119/287 (41%), Positives = 167/287 (58%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ L+ +++ V R ++D+ F PDVIIN AA+T Sbjct: 3 RFLITGAKGQVGYCLTKQLQSKADVLAVDRDELDITNRDAVFKVVREFHPDVIINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E++ +IN +G +A+AA+ I ++ISTDYVF+G E NP Sbjct: 63 AVDRAESEIELSEAINVKGPQYLAEAANEIDAIILHISTDYVFEGTGSGEYKENDEPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGK+KLAGE V ++ILRTAWV+ G+NF+ +MLRLAKER + +V DQFG Sbjct: 123 GVYGKTKLAGEIAVQQANKRHIILRTAWVFGEHGNNFVKTMLRLAKERESLGIVSDQFGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA ++I IA N+I NS + G++H T VSWADFA+ IF E+ + Sbjct: 183 PTYAGDIASSLIHIA-NIILNSKIDVFGVYHFTGK-PYVSWADFAKKIFDEAVSQKVLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA S LD +K+ I+ S W++ ++NI Sbjct: 241 APLVNFIATSNYPTSAKRPANSRLDLTKIDEVFGIKPSNWQQALKNI 287 >gi|153829572|ref|ZP_01982239.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 623-39] gi|148874968|gb|EDL73103.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 623-39] Length = 296 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 173/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L+ ++VE + + R +D+ P + F P++IIN A Sbjct: 2 MRILVTGSRGQVGHFLAQQLSTMKEVEFLAIDRDQLDITHPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 +G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 YGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|29725981|gb|AAO88915.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 172/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L+ ++VE + + R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLAQQLSTMKEVEFLAIDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 +G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 YGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|160940129|ref|ZP_02087474.1| hypothetical protein CLOBOL_05018 [Clostridium bolteae ATCC BAA-613] gi|158436709|gb|EDP14476.1| hypothetical protein CLOBOL_05018 [Clostridium bolteae ATCC BAA-613] Length = 286 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + ++ +E V ++D+ + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGHDVMDELALRGIEGFGVDVEEMDITDRTACETVISQEKPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INAEG IA+ ++ I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNLELCRKINAEGTRNIARVCKAMDIKMMYISTDYVFNGGGERPWEPDDHRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V Y I+R AWV+ + G NF+ +MLRL KE+ +SVV DQ Sbjct: 121 PLNVYGLTKYEGEIAVEQNVQKYFIVRIAWVFGVNGKNFIKTMLRLGKEKGAVSVVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +P KA RP+ S + KL R+ +W+ + L + Sbjct: 230 EVKVTPVDSDGFPAKAKRPSNSRMSKEKLTENGFERLPSWQNALERYLKAL 280 >gi|220909659|ref|YP_002484970.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219866270|gb|ACL46609.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 298 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 167/292 (57%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L++G+ GQ+ L + E++ + R +DL P+ P VIIN AAYT Sbjct: 10 KILLLGSQGQVGAELQHILSSASELMALSRAQLDLAHPQRLPDLIAEIQPQVIINAAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE+A +NA+ +A AA +++STDYVF G TP E PT PL Sbjct: 70 AVDRAESEPEVAEIVNAKVPTELAIAARQCNALLVHLSTDYVFAGQQSTPYRETDPTAPL 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 ++YG++KLAGEE + + ++ILRTAWVY ++G NF+ +MLRL +R E+ VV DQ G Sbjct: 130 SVYGQTKLAGEEGIRQVWDRHLILRTAWVYGVYGKGNFVKTMLRLGADRSELRVVADQVG 189 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A AI + + G +H T + G SW DFA IF E+ +RG Sbjct: 190 SPTWAADLAGAIAHLVQHF----QPDWAGTYHYT-NSGVTSWYDFAIAIFEEARQRGFKL 244 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPAYS L+C K ++ W++ +R +L N+ Sbjct: 245 QVEQVMPITTPEYPTPATRPAYSVLNCQKFSSLLGAAPPHWRQSLRQMLTNL 296 >gi|302384839|ref|YP_003820661.1| dTDP-4-dehydrorhamnose reductase [Clostridium saccharolyticum WM1] gi|302195467|gb|ADL03038.1| dTDP-4-dehydrorhamnose reductase [Clostridium saccharolyticum WM1] Length = 282 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK V G GQ+ + + + E + V ++D+ + +PD +I+ AA Sbjct: 1 MKVFVTGVKGQLGFDVVNELKKRGHEAVGVDIDEMDITDRDSVNLVIQAAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE+ E+ ++NA+G +IAK + IP +YISTDYVF+G P + P Sbjct: 61 YTAVDAAEENEEVCRNVNAKGTESIAKVCRELDIPMMYISTDYVFNGQGTRPWEPDDPRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V Y I+R AWV+ + G NF+ +ML L K +++VV DQ Sbjct: 121 PLNVYGQTKYEGELAVEENLTKYFIVRIAWVFGVNGKNFIKTMLNLGKTHDKLTVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + +T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTFDLARLLVDMI-------ETEKYGRYHATNE-GMCTWHEFACEIFKQA----GM 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + + QYP KA RPA S ++ KL +R+ +W++ ++ L Sbjct: 229 DVKVEPVSSDQYPAKAKRPANSRMNKDKLEENGFLRLPSWQDALKRYL 276 >gi|330806982|ref|YP_004351444.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375090|gb|AEA66440.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 289 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 118/288 (40%), Positives = 167/288 (57%), Gaps = 2/288 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG NGQ++++L S E+I G +DL +P + + P +IIN AA+ Sbjct: 1 MRILIIGQNGQVSRALQSRLSGLGELIVRGSDQLDLAQPDSLRAPIEALKPGLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE AF+INA G +A+AA ++G+P I+ STDYVFDGL P E NP Sbjct: 61 TAVDQAESEPERAFAINATAPGILAQAAVALGVPLIHYSTDYVFDGLKPAPYTEDDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG+SKLAGE + ++ILRT+WVYS G NFLL+M RL +E+ ++ VV DQ G Sbjct: 121 LSVYGRSKLAGENAIRQAGGQHLILRTSWVYSTEGRNFLLTMQRLLQEKPQLRVVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA + Q+ + G +H+TA G SW FA+ I +R P Sbjct: 181 APTWAGTIADSTAQLIERW-QAGQPGAWGTYHLTA-RGETSWFGFAQAIGENLLDRHKPC 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + I + YPT A RP S LDC++L + W+ ++ L Sbjct: 239 ALLEPIESSAYPTPAPRPLNSRLDCTRLFKEWGVSQPDWRSALQQCLA 286 >gi|288801217|ref|ZP_06406672.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299 str. F0039] gi|288331828|gb|EFC70311.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 299 str. F0039] Length = 284 Score = 342 bits (877), Expect = 4e-92, Method: Composition-based stats. Identities = 110/290 (37%), Positives = 169/290 (58%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+NGQ+ + ++ Q+ + + ++D+ K F +S S D IIN A Sbjct: 1 MRILVTGSNGQLGSEIVALQAQESHHQWFNLDINELDITDKKAIEQFVMSNSIDGIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VDKAE++ E+ + +N + +A+A + +G I+ISTDYVFDG+S P E Sbjct: 61 AYTNVDKAEEDIEVCYKVNRDAPQYLAQAIEKVGGFIIHISTDYVFDGISNIPYTEQDNP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ IYGKSK+AGE+ V + +VI+RTAWVYS FG NF+ +M++L KE+ + V+ DQ Sbjct: 121 NPVTIYGKSKIAGEQNVCNSCKRHVIIRTAWVYSSFGKNFVKTMIKLGKEKANLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A+ I I + I + G ++ + + G +SW DF ++I + Sbjct: 181 IGSPTYARDLAKTITTIINQGI------IPGTYNFSNE-GVISWFDFTKHIHQLAKI--- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV I T YPT A RP +S LD +K+ T+NI I W++ + + Sbjct: 231 TSCKVIPIHTADYPTLAKRPHFSVLDKTKIKKTYNIEIPYWRDSLEECIQ 280 >gi|222445607|ref|ZP_03608122.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii DSM 2375] gi|222435172|gb|EEE42337.1| hypothetical protein METSMIALI_01247 [Methanobrevibacter smithii DSM 2375] Length = 280 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 156/288 (54%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLIDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ E AFS+N EG +A P ++ISTDYVF+G + TP E P Sbjct: 61 TDVDGCEENRERAFSVNGEGVRNLAIGCREADCPLVHISTDYVFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GE+ + + + I+RTAW+Y + G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEQAIQEILDKFFIVRTAWLYGVNGGNFPKTMLELAKTHDELTVVYDEIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A AI ++ +T GI+H+T + G SW +FA+YIF + G Sbjct: 181 TPTYTPDLAEAIGKLI-------ETDYYGIYHIT-NSGNCSWCEFAKYIFEIA----GVD 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + ++ A RP+YS L+ K + + ++KE +++ L+ Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKKWVDNGFEPLRSYKEAIKDYLI 276 >gi|37678486|ref|NP_933095.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016] gi|37197226|dbj|BAC93066.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus YJ016] Length = 293 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 163/288 (56%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G++GQ+ L + +I+ + R +D+ + + F +F P +IN AAY Sbjct: 1 MRVLIVGSSGQLGHCLVRSLQTEHDILALDRQQLDICEEQAVEKVFATFQPQFVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A+ +N EG +A+ G P ++ISTDYVFDG E P Sbjct: 61 TAVDKAESEPEMAYRVNEEGPKLLAQECHHHGCPLVHISTDYVFDGDKNGLYCEDDRPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYG SKLAGE V + Y ILRT+WV+S FG+NF+ +MLR ER ++ +V DQ G Sbjct: 121 GNIYGMSKLAGEHAVQHACSQYYILRTSWVFSEFGNNFVKTMLRQGAERTQLGIVSDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR I ++ + + G++H + VSW +FA+ IF + E+G Sbjct: 181 GPTYAGDIARVIGRLLERF-QFGEPVEYGLYHFSG-MPHVSWFEFAQAIFGLAHEQGVLK 238 Query: 241 SKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV + T++YPT A RP S LD +KL + + S WK + + Sbjct: 239 RKVELKPLSTREYPTAAIRPMNSRLDSTKLKSQLQLEASDWKAALNQL 286 >gi|29726006|gb|AAO88935.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 171/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 +G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 YGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSQLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|146293634|ref|YP_001184058.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] gi|145565324|gb|ABP76259.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] Length = 291 Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats. Identities = 119/290 (41%), Positives = 166/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G++GQ+ L Q DVE + V R +D+ + F PD IIN A Sbjct: 1 MKILVTGSHGQVGSCLVKQLSQMPDVEFLAVDREQLDITNSAAVSKLVNQFKPDAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +A++A+ +G ++ISTDYVF G E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAQSANRVGATILHISTDYVFAGDKDGEYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E+ VV DQ Sbjct: 121 APQGVYGHSKLAGELAVAAACPRHIILRTAWVFCETGNNFVKTMLRLAQNRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 FG PT A IA A+I +A + E + + GI+H V+W FA IF ++ E+G Sbjct: 181 FGGPTYAGDIANALIVMAKAVSEGNQS--FGIYHYAG-LPHVNWHQFAMEIFAKAKEQGV 237 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I + QYPT A RPA S LDC K+ ++ S W+ + N+ Sbjct: 238 LNKEVLVNSITSDQYPTPAKRPANSKLDCRKIEQIFGVKPSDWQTALNNL 287 >gi|153826343|ref|ZP_01979010.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2] gi|149739912|gb|EDM54099.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae MZO-2] Length = 296 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 170/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|56965450|ref|YP_177182.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16] gi|56911694|dbj|BAD66221.1| dTDP-4-dehydrorhamnose reductase [Bacillus clausii KSM-K16] Length = 281 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 168/289 (58%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ L S + ++ + R D+D+ S F PD++++ AAY Sbjct: 4 RVLITGAGGQLGHDLVSQFSLNGYQVFGLTRQDLDITDQDMVKSVFEKVKPDLVVHAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + + AF +NA G +A A+ +YISTDYVF+G +R PI+EFSP P Sbjct: 64 TAVDQAESDVDDAFRVNAIGTRNVAVEANRYNAKVVYISTDYVFNGQAREPINEFSPVAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + IYG+SKLAGE + N + I+RT+WVY G+NF+ +ML+L +E+ EI VV DQ G Sbjct: 124 IGIYGQSKLAGENYIRDLCNQFFIVRTSWVYGSLGNNFVKTMLKLGQEKEEIGVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A++I++I T GI+H++ + G SW +FA+ IF S G Sbjct: 184 SPTYTVDLAKSIVEI-------GATEKFGIYHVS-NSGSCSWYEFAKAIFEIS----GID 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T+++P A RPAYS D L ++ W+E +R+ L N Sbjct: 232 VKVKALSTEEFPRPAKRPAYSVFDHMGLRLNGFNKVRNWREALRDFLEN 280 >gi|115279711|gb|ABI85327.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] gi|115279743|gb|ABI85359.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 341 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 114/291 (39%), Positives = 171/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|291615366|ref|YP_003525523.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] gi|291585478|gb|ADE13136.1| dTDP-4-dehydrorhamnose reductase [Sideroxydans lithotrophicus ES-1] Length = 299 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 156/291 (53%), Gaps = 6/291 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L EII + +DL P PD+I+NPAAYT Sbjct: 3 RILVTGKNGQVGWELQRSLAAFGEIIALDSDSMDLADPDAIRRTIREVRPDIIVNPAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A ++N G +A+ A +G ++ STDYVFDG P E NP Sbjct: 63 AVDKAESEMELANAVNGIAPGVLAEEAKLLGAILVHYSTDYVFDGSKPAPYVESDVPNPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KLAGE+ V + ++I RT+WVY + G NF+ +MLRLA+ER E+ +V DQFG Sbjct: 123 SVYGRTKLAGEQAVRASGCKHLIFRTSWVYGVHGGNFVKTMLRLARERNELRIVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE----R 236 PT A IA + HN + D L G++H+TA G +W FAE I E+ + Sbjct: 183 PTWAKDIANSTATALHNWQQLAWDDRLSGLYHLTA-AGRTNWHQFAETIIREARKYDTAL 241 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T +YP A RP S L K+ N I + W++ + + Sbjct: 242 AAKTIAVNPIATHEYPLPAKRPVNSVLANDKVRNAFGIAMPEWQDSLVECV 292 >gi|7592817|dbj|BAA94404.1| dTDP-6-deoxy-L-lyxo-4-hexulose redactase [Actinobacillus actinomycetemcomitans] Length = 292 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 120/287 (41%), Positives = 165/287 (57%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGRHEILAVDHDELDITNQSAVKKTVENFRPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E +P Sbjct: 63 AVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAADPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+IQIA +I ++ GI+H T + VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIA-GESVEYGIYHFTGE-PYVSWCDFARAIFDEAVSQNMLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 APLVNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|298372398|ref|ZP_06982388.1| dTDP-4-dehydrorhamnose reductase [Bacteroidetes oral taxon 274 str. F0058] gi|298275302|gb|EFI16853.1| dTDP-4-dehydrorhamnose reductase [Bacteroidetes oral taxon 274 str. F0058] Length = 287 Score = 341 bits (875), Expect = 7e-92, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 165/294 (56%), Gaps = 14/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC---VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M L+ G+ GQ+ + ++ + I +D+ + FF + D+++N Sbjct: 1 MNILITGSYGQLGSEIRTLYTKKAGEHHFIFTDVDTLDICDETAVSDFFAAHKIDLVVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + + IN+ + AA G I+ISTDYVFDG + P E Sbjct: 61 AAYTAVDKAESDTDKCRQINSLSVRNLMSAAKRHGARIIHISTDYVFDGTAHKPYVETDR 120 Query: 118 TNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P ++YG +K GE + Y ++ +I+RT+W+YS FG+NF+ +MLRL KER+E+SVV Sbjct: 121 IAPQSVYGSTKAEGEAVLLDNYADDSIIVRTSWLYSTFGNNFVKTMLRLGKERKELSVVF 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT+A +A AI+ I SD G++H + + G SW DFA+ IF + Sbjct: 181 DQVGSPTNAADLAEAILSIVC-----SDRFESGVYHYSNE-GVCSWYDFAKAIFELA--- 231 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + QYPT A RP YS L+ +K+ + + I+I W++ ++ ++ +I Sbjct: 232 -HIDCRVLPIESSQYPTPAKRPHYSVLNKAKIKSVYGIQIPYWRDSLQRVISSI 284 >gi|253575949|ref|ZP_04853283.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844743|gb|EES72757.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. oral taxon 786 str. D14] Length = 289 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 100/293 (34%), Positives = 163/293 (55%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + ++ R +D+ F PD II+ AA Sbjct: 1 MRVLVTGAKGQLGHDVVHLFENAGHLVLPCDRDSLDITDGAMCLERVQQFKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + + A+++NA G + AA+ + YISTDYVFDG + +P E+ TN Sbjct: 61 YTAVDQAETDVDAAYAVNAVGTRNMVLAAERVKAKFCYISTDYVFDGTNVSPYQEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSK AGE V S ++ + I+RT+WVY + G NF+ +ML+L +E+ ++VV DQ Sbjct: 121 PQSVYGKSKRAGEILVQSLSSTFFIVRTSWVYGLHGQNFVKTMLKLGQEKPILNVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RG 237 G+PT + +A ++++ T GI+H ++ G +W +FA+ IF E++ R Sbjct: 181 GSPTYTVDLATFLLELIQ-------TEKYGIYH-ASNTGECTWFEFAQAIFEEASVILRK 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V T+++P A RP YS LD + + W+EG+++ L + Sbjct: 233 HYMAQVEPCTTEEFPRPAQRPRYSVLDHMAIRTNGLQDLRFWREGLKDFLREL 285 >gi|167753451|ref|ZP_02425578.1| hypothetical protein ALIPUT_01725 [Alistipes putredinis DSM 17216] gi|167658076|gb|EDS02206.1| hypothetical protein ALIPUT_01725 [Alistipes putredinis DSM 17216] Length = 286 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 154/290 (53%), Gaps = 8/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G +GQ+ + + ++ D+D+ F + D I+N AAY Sbjct: 3 NILVTGADGQLGREMRTLGAASRHRYFFTDVADLDITDANAVRRFVENERIDAIVNCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE+E E A IN E +A+AA + G +ISTDYVF G+ P E PT P Sbjct: 63 TNVDKAEEEAETADRINHEAVRNLAEAAKACGATLFHISTDYVFGGMGNIPFREEDPTAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGK+KLAGEE + + +++ RTAW+YS +G NFL +ML+L ++ E+ VV DQ G Sbjct: 123 LGVYGKTKLAGEEAIVASGCKHLVFRTAWLYSPYGRNFLKTMLQLTADKPELQVVFDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A I IE+ D + R F+ ++ G SW DFA I +A G Sbjct: 183 TPTCVADLACVIFD----RIESGDYAGREGFYHFSNEGVCSWFDFAHEI---AALAGHTS 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ + ++P+K RP YS LD +K+ T I I W++ + + + Sbjct: 236 CKIRPCHSAEFPSKVQRPNYSVLDKTKIKTTFGIDIPHWRDSLVRCMATL 285 >gi|253563372|ref|ZP_04840829.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947148|gb|EES87430.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 162/292 (55%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ ++D+ + ++ D+I+N A Sbjct: 1 MNILVTGANGQLGNEMQVLARENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDIIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDNVELCDKLNNIAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEEEPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL +ER + V+ DQ Sbjct: 121 CPASVYGSTKLAGEQNVMDHCEKAMVIRTAWLYSIYGNNFVKTMIRLGQERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + + +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIFAAINKGV------VRGIYHFS-DEGVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T YP KA RP YS LD +K+ +T I I W+E ++ + + Sbjct: 231 ASCKVKPLHTADYPAKAPRPHYSVLDKTKIKDTFGIEIPHWEESLKRCINQL 282 >gi|167748150|ref|ZP_02420277.1| hypothetical protein ANACAC_02894 [Anaerostipes caccae DSM 14662] gi|167652142|gb|EDR96271.1| hypothetical protein ANACAC_02894 [Anaerostipes caccae DSM 14662] Length = 281 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 147/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + E I V ++D+ + + D +I+ AA Sbjct: 1 MKILVTGAAGQLGHDVMDELKKRGHEGIGVDVQEMDITDAEKVRQVITAADVDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INA+G IA+ + + +YISTDYVFDG P D N Sbjct: 61 YTAVDAAEDNAELCRKINADGTEHIARVCRDLDLKMMYISTDYVFDGQGERPWDPDDERN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + I+R AWV+ + G NF+ +ML LAK ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEQNLDKFFIVRIAWVFGVNGKNFIKTMLNLAKNHDRLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR + + +T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLADMI-------ETDKYGRYHATNE-GLCTWYEFACEIFKQA----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA RP S + KL R+ W++ + L I Sbjct: 229 EIEVAPVGSDEYPAKAKRPENSRMSKDKLTQNGFERLPAWQDALARYLKEI 279 >gi|29725991|gb|AAO88923.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 114/291 (39%), Positives = 171/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|260911585|ref|ZP_05918170.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634291|gb|EEX52396.1| dTDP-4-dehydrorhamnose reductase [Prevotella sp. oral taxon 472 str. F0295] Length = 282 Score = 341 bits (875), Expect = 9e-92, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 160/293 (54%), Gaps = 14/293 (4%) Query: 1 MKCLVIGNNGQIAQS---LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M L+ G NGQ+ L +MC Q ++D+ F S I+N Sbjct: 1 MNILITGCNGQLGNEIKLLQAMCAQ-HTWFNTDVNELDITDKAAIEHFVESNEIGGIVNC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + +A +NA+ +A+A G + +STDYVFDG TP E Sbjct: 60 AAYTAVDKAESDLLLARELNADAPAFLAEAVAKRGGWMVQVSTDYVFDGTKHTPYVESDE 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YG++KL GE+ VA + N +I+RTAW+YS FG+NF+ +M+RL KER ++ V+ D Sbjct: 120 PCPNSVYGQTKLEGEQAVAKFCPNSMIIRTAWLYSEFGNNFVKTMIRLGKEREQLGVIFD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI+ I+ GI+H + + G SW DF + I S G Sbjct: 180 QVGTPTYAHDLATAIMTAIDKGIK------PGIYHFSNE-GVTSWYDFTKSIHRLS---G 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YPT A+RP+YS LD +K+ T+ I I W+E + + + Sbjct: 230 ITTCQVSPLHTVEYPTPANRPSYSVLDKTKIKTTYGIEIPHWEESLAKCIAKL 282 >gi|270293544|ref|ZP_06199746.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] gi|270275011|gb|EFA20871.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] Length = 284 Score = 340 bits (874), Expect = 9e-92, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + ++ + ++D+ + F DVI+N A Sbjct: 1 MNILITGANGQLGNEMRVLSKENGQHAYFFTDVQELDICDEQAVHGFVKDNRIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E +N G +A AA++ G I +STDYVFDG TP E + T Sbjct: 61 AYTAVDKAEDNQEFCDKLNHVAPGYLAAAAEACGAALIQVSTDYVFDGTGHTPYTEEAAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + + +I+RTAW+YSI+G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLAGEQAVMKHCSRAMIIRTAWLYSIYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAVNRGI------VPGIYHFSNE-GVCSWYDFTLAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD +K+ T I I W+ + + N+ Sbjct: 231 KTCKVSPLHTDEFPAKAPRPHYSVLDKTKIKKTFGIDIPHWEASLAVCMKNL 282 >gi|262192434|ref|ZP_06050586.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93] gi|262031698|gb|EEY50284.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae CT 5369-93] Length = 296 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 173/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ SL ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHSLVQQLSTMKEVEFLAVDRDQLDITHPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA+ +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAANKVGAVILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACLRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|317130377|ref|YP_004096659.1| dTDP-4-dehydrorhamnose reductase [Bacillus cellulosilyticus DSM 2522] gi|315475325|gb|ADU31928.1| dTDP-4-dehydrorhamnose reductase [Bacillus cellulosilyticus DSM 2522] Length = 284 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 158/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + ++ +I G ++D+ + ++ PD II+ AA Sbjct: 1 MKILVTGFNGQLGFDVVRIGNENGMTMIGTGIEELDITDQTNVDTYVKKIKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E ++ +N EG + AA IYISTDYVF+G P E + Sbjct: 61 YTAVDKAEDEKEQSWKVNVEGTKYLVDAAKKNEAKFIYISTDYVFNGEGENPYIETDQPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG +K GE+ V + I+R +WV+ I G+NF+ +MLRL++ +++VV DQ+ Sbjct: 121 PVSYYGITKYEGEKVVRDSLEKWFIIRISWVFGINGNNFIKTMLRLSETNSQLNVVGDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ +I + T GI+H+T + G SW DFA IF ++ Sbjct: 181 GSPTYTYDLAKLLIDMVK-------TEKYGIYHVTNE-GFCSWYDFANEIFRQA----NK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T ++PTKA RPA S + KL + + WK V++ L + Sbjct: 229 EVKVNSITTDKFPTKAKRPANSKMSKQKLVDNGFKSLPDWKNAVKHYLNEL 279 >gi|218130285|ref|ZP_03459089.1| hypothetical protein BACEGG_01873 [Bacteroides eggerthii DSM 20697] gi|317473772|ref|ZP_07933053.1| RmlD substrate binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] gi|217987569|gb|EEC53897.1| hypothetical protein BACEGG_01873 [Bacteroides eggerthii DSM 20697] gi|316910029|gb|EFV31702.1| RmlD substrate binding domain-containing protein [Bacteroides eggerthii 1_2_48FAA] Length = 287 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + ++ ++ ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRALSAENGQHTYFFTDVQELDICDEQAIRAFVSGNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNPELCDKLNHIAPGYLAAAAEACGAAMIQVSTDYVFDGTGHIPYTEDIAP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +I+RTAW+YSI+G+NF+ +M+RL ER ++ VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVGEKCSRAMIIRTAWLYSIYGNNFVKTMIRLGNEREKLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + G++H + D G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAINQGI------VPGVYHFS-DEGVCSWYDFTVAIHRMA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T I I W+E ++ + + Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIEIPHWEESLQVCIDKL 282 >gi|29726001|gb|AAO88931.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 114/291 (39%), Positives = 172/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|53712602|ref|YP_098594.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|60680814|ref|YP_210958.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis NCTC 9343] gi|265762742|ref|ZP_06091310.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|52215467|dbj|BAD48060.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|60492248|emb|CAH07013.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis NCTC 9343] gi|263255350|gb|EEZ26696.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|301162311|emb|CBW21856.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis 638R] Length = 287 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 162/292 (55%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ ++D+ + ++ D+I+N A Sbjct: 1 MNILVTGANGQLGNEMQVLARENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDIIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDNVELCDKLNNIAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEEEPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL +ER + V+ DQ Sbjct: 121 CPASVYGSTKLAGEQNVMDHCEKAMVIRTAWLYSIYGNNFVKTMIRLGQERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + + +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLAQAIFAAINKGV------VRGIYHFS-DEGVCSWYDFTIAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T YP KA RP YS LD +K+ +T I I W+E ++ + + Sbjct: 231 ASCKVKPLHTADYPAKAPRPHYSVLDKTKIKDTFGIEIPHWEESLKRCINQL 282 >gi|18309600|ref|NP_561534.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens str. 13] gi|110800859|ref|YP_695052.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|110801012|ref|YP_694936.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|18144277|dbj|BAB80324.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens str. 13] gi|110675506|gb|ABG84493.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] gi|110675659|gb|ABG84646.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens ATCC 13124] Length = 294 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELA----GNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|254286304|ref|ZP_04961263.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226] gi|150423719|gb|EDN15661.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae AM-19226] Length = 296 Score = 340 bits (873), Expect = 1e-91, Method: Composition-based stats. Identities = 114/291 (39%), Positives = 172/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVEGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQYFGVVASDWQTALNHLI 290 >gi|116251390|ref|YP_767228.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. viciae 3841] gi|115256038|emb|CAK07119.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. viciae 3841] Length = 295 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 152/291 (52%), Positives = 196/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEISAVGRPEMDLADPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAG +A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGVVAQAAARIGAPVIHISTDYVFSGDKVSAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGNNFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + + SLRGIFH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIASRIVADPEPSLRGIFHLTG-SGEASWADFAEEIFTELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 TVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 290 >gi|170692119|ref|ZP_02883283.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] gi|170143403|gb|EDT11567.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] Length = 308 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 115/292 (39%), Positives = 155/292 (53%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L+ ++ V R +DL + P +I+NPAAYTA Sbjct: 10 ILVTGVNGQVGYELARTLQGLGHVVAVDRSTLDLSNLDQIRAVVRDVKPALIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE+A IN E G +A+ A +G I+ STDYVFDG + E P NP N Sbjct: 70 VDKAEQEPELAMRINGEAPGVLAEEARKLGAALIHYSTDYVFDGEKQGAYVESDPANPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQFG P Sbjct: 130 VYGRSKLAGEQAIAATGENHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T IA IA D++ GI+H+ A G SW FA IF + Sbjct: 190 TWCNTIATLTAHIAAQSFATPDSASWWRERSGIYHLCA-GDATSWHGFASAIFDLADLPQ 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I YPT A RP+ S + KLA + W++ ++ L + Sbjct: 249 RPNT--LPIPAADYPTPARRPSNSRMSNDKLARVFGLAAPHWRDALKLCLTD 298 >gi|32170825|gb|AAP57701.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas elodea] Length = 288 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 129/290 (44%), Positives = 179/290 (61%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQSL Q E+I P+ DL +P+ + P++I++ AAY Sbjct: 1 MRILVTGHDGQVAQSLGEQ-AQGHELIFTSYPEFDLSRPETIEAAVAKIQPELIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK+E EPE+A +IN +G G +A+A IG P I +STDYVFDG P E PT P Sbjct: 60 TAVDKSESEPELAMAINGDGPGVLARAGAKIGAPIIQLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALNVVEDQQG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+ + D + G++H G +WADFA IF ESA+RGGP Sbjct: 180 CPSSALDIASAILAVVERW--QRDGAFSGVYHFAG-SGETNWADFARAIFAESAKRGGPT 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I + YPT A RPA S LDCS+ A+T R W++ + ++ + Sbjct: 237 ATVTGIPSSDYPTPAKRPANSRLDCSRFADTFGYRAPAWQDSLAVVMGRL 286 >gi|168216435|ref|ZP_02642060.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC 8239] gi|182381469|gb|EDT78948.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens NCTC 8239] Length = 294 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 157/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E+ + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCENNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + + V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELAENK----CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|104779534|ref|YP_606032.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas entomophila L48] gi|95108521|emb|CAK13215.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Pseudomonas entomophila L48] Length = 286 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 122/288 (42%), Positives = 169/288 (58%), Gaps = 2/288 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+AQ+L E++ +GR +DL +P+ PD+IIN AA+ Sbjct: 1 MKILVCGRNGQVAQALQGALDGHGEVLSLGRDRLDLARPEALREPLRQLKPDLIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++AF+INAE +A+ A +G P I+ STDYVFDG T +E TNP Sbjct: 61 TAVDQAESEAQLAFAINAEAPRVLAEEAARLGAPLIHYSTDYVFDGTKATAYNEDDATNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ +A ++ILRT+WVYS+ G NFLL+M +L +ER ++ VV DQ G Sbjct: 121 LGVYGSSKLAGEQAIAKVGGEHLILRTSWVYSLQGRNFLLTMQKLLQERPQLKVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA + + + + G +H+TA G SW FA I + RG P Sbjct: 181 APTWAATIAASTRALVERWRQGQAGAW-GTYHLTAQ-GETSWYGFALAIGEQLKARGLPC 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +++ I + +YPT A RP S LDCS+LA + W E + + L Sbjct: 239 AELLPIPSSEYPTPAKRPLNSRLDCSRLAREWQVSQPHWHEALIDCLK 286 >gi|29725996|gb|AAO88927.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 171/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNKFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A +++ T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVDGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQTALNHLI 290 >gi|168212615|ref|ZP_02638240.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str. F4969] gi|170715772|gb|EDT27954.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens CPE str. F4969] Length = 295 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 156/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENTKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + + V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELAENK----CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|29725986|gb|AAO88919.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 172/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A +++ + T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVDGNSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|310644247|ref|YP_003949006.1| dtdp-4-dehydrorhamnose reductase [Paenibacillus polymyxa SC2] gi|309249198|gb|ADO58765.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus polymyxa SC2] Length = 290 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 161/292 (55%), Gaps = 11/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G +GQ+ + + ++ Q ++ R +D+ + + P+ II+ AA Sbjct: 1 MRILVTGASGQLGKDVVNVFQGQGHDVWGYDREQLDITDLEQVVKIVGQYQPNAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G +A AA+ G +YISTDYVFDG + E+ TN Sbjct: 61 YTAVDAAESDIDTAYQVNATGTRNMALAAEKTGAKLVYISTDYVFDGTAEGLYHEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSK AGE + ++ Y I+RT+WVY + G+NF+ +ML+L +E+ + VV DQ Sbjct: 121 PQSIYGKSKRAGEVLTQTLSSRYFIVRTSWVYGLHGNNFVKTMLKLGQEKPNLQVVNDQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG- 238 G+PT + +AR + ++ T GI+H ++ G +W +F + I ++AE Sbjct: 181 GSPTYTVDLARFLAELIQ-------TEKYGIYH-ASNSGSCTWYEFTQAILQDAAELFAV 232 Query: 239 -PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V T+Q+P A RP S L+ + + + W++G+R+ L Sbjct: 233 KITANVEPCSTEQFPRPAARPRNSVLEHIAIRSNGFHVLQDWRKGLRDFLQE 284 >gi|261349841|ref|ZP_05975258.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM 2374] gi|288860625|gb|EFC92923.1| dTDP-4-dehydrorhamnose reductase [Methanobrevibacter smithii DSM 2374] Length = 280 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 102/287 (35%), Positives = 157/287 (54%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L+ + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLTDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ E+AFS+N EG +A P ++ISTDY+F+G + TP E P Sbjct: 61 TNVDGCEENQELAFSVNGEGVRNLAIGCREADCPLVHISTDYIFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GEE + + + I+RTAW+Y I G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTMLELAKTHDELTVVYDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT L +A AI ++ +T GI+H+T + G SW +FA+YIF + Sbjct: 181 TPTYTLDLAEAIGKLI-------ETDYYGIYHIT-NSGSCSWCEFAKYIFEVAEV----D 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ A RP+YS L+ + + + ++KE +++ L Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKRWVDNGFEPLRSYKEAIKDYL 275 >gi|251790436|ref|YP_003005157.1| dTDP-4-dehydrorhamnose reductase [Dickeya zeae Ech1591] gi|247539057|gb|ACT07678.1| dTDP-4-dehydrorhamnose reductase [Dickeya zeae Ech1591] Length = 285 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 160/292 (54%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + Q ++ +D+ + S+ PD I+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPQGWSVLATDTDSLDITDEAQVQATVASWQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A+AA G I++STDYVFDG + P E T+P Sbjct: 61 TAVDKAESEPELAARINVAGPEYLARAARQQGARFIHVSTDYVFDGTATRPYIETDATHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V I+RTAWV+S +G+NF+ +MLRL +ER + VV DQ G Sbjct: 121 LGVYGQTKLDGERAVLKVNPAAQIVRTAWVFSEYGNNFVKTMLRLGRERDSLGVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA AII + E G++H D VSW FA+ IF + ++ Sbjct: 181 CPTYAGDIADAIIGVLQQQAEG------GLYHFCGDE-EVSWHAFADAIFAVADKQQLLS 233 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+QYPT A RPAYS L+C+K+A I S W+ + I+ + Sbjct: 234 RVPTVNAITTEQYPTPAARPAYSTLNCTKIAR-LGISPSAWRAALSVIIPKL 284 >gi|189500819|ref|YP_001960289.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1] gi|189496260|gb|ACE04808.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides BS1] Length = 286 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 157/291 (53%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ L + + + P +D+ + D I+N A Sbjct: 1 MNILVTGGNGQLGSELKELAARHEGMTFFFYDLPLLDITDRAMVHRVCGEHAVDAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEPE A+ +N +G +A+AA +++STDYVF+G S TP E Sbjct: 61 AYTAVDRAEDEPEAAYRVNRDGPEVLAEAAKERHALLVHVSTDYVFNGESCTPYHEGDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SK GEEK+ + +Y+I+RT+W+YS G NF+ +MLRL ER E+ VV DQ Sbjct: 121 SPLGVYGQSKWEGEEKIRAIAPSYMIVRTSWLYSSHGRNFVKTMLRLGSERDELKVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ + + + + +H + + G SW DFA + Sbjct: 181 AGTPTLAADLAEALVSMLSRY--DREHTYAETYHYSNE-GVCSWYDFARAVM----RARQ 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +YPTKA RP YS LD K+ N+ I W++ + +L Sbjct: 234 LPCRVLPVGSGEYPTKAKRPHYSVLDKGKIKEHWNLEIPHWQDSLERMLKR 284 >gi|50120379|ref|YP_049546.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium atrosepticum SCRI1043] gi|49610905|emb|CAG74350.1| dTDP-4-dehydrorhamnose reductase [Pectobacterium atrosepticum SCRI1043] Length = 283 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 119/291 (40%), Positives = 166/291 (57%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + +I ++D+ + + PD I+N AAY Sbjct: 1 MKILLTGANGQLGRCFQDRLPTHWQIWSTDANELDITDLTQIEAAIARYQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E +A IN G +A A GI +++STDYVFDG + TP E S TNP Sbjct: 61 TAVDKAESESVLAEKINVTGPHNLATVAHQKGIRLVHVSTDYVFDGNATTPYLESSTTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAGE+ V + +I+RTAWV+S +G+NF+ +MLRLAKER +S+V DQ G Sbjct: 121 LSVYGKTKLAGEQAVTKAAPDAIIVRTAWVFSEYGNNFVKTMLRLAKERDALSIVADQKG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A+AII + E GI+H D VSW +FA+ IF + ++ Sbjct: 181 CPTYAGDLAQAIISLIEKNAE------CGIYHYCGDK-EVSWYEFAKTIFEMAKQQDIID 233 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ I T+QYPT AHRP YS L C K+A I+ S W + + +L Sbjct: 234 KQPQLTAITTEQYPTPAHRPQYSSLSCEKIARLT-IKPSDWTDALSQVLAR 283 >gi|16357462|gb|AAL18014.1| dTDP-dehydrorhamnose reductase [Aneurinibacillus thermoaerophilus] Length = 282 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 156/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ ++ M + GR ++D+ K PDV+I+ AA Sbjct: 1 MKVLVTGGKGQFGYDVTQMLQGAGHRVFSYGREELDITDQKQVQYTMEEVQPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E A+ +NA G +A AA++ +YISTDYVFDG + P EF+PTN Sbjct: 61 YTKVDLAETEVNTAYKVNALGTRNVAVAAEACRAKLVYISTDYVFDGQAAGPYHEFAPTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSKLAGE V + + I+RT+WVY +G NF+ +MLRLA ER E++VV DQ Sbjct: 121 PQSIYGKSKLAGESFVQQLCSRFFIVRTSWVYGKYGHNFVKTMLRLAGERDELNVVHDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A ++ + +T GI+H ++ G SW +FA IF E+ Sbjct: 181 GCPTYTVDLAAFVLNLI-------ETEAYGIYH-ASNTGSCSWYEFACAIFEEAE----I 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T +YP A RPA S + + + W+ ++ + +I Sbjct: 229 KIKVNPIPTSEYPLPAPRPANSVFEHMMIRLQEMKPLRPWRIALQEFIQDI 279 >gi|153214737|ref|ZP_01949582.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587] gi|124115173|gb|EAY33993.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae 1587] Length = 296 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 115/293 (39%), Positives = 173/293 (59%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A +++ + T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVDGNSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T++YPT A RPA S LD K+ + S W+ + N L++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAAL-NYLID 291 >gi|218134415|ref|ZP_03463219.1| hypothetical protein BACPEC_02318 [Bacteroides pectinophilus ATCC 43243] gi|217989800|gb|EEC55811.1| hypothetical protein BACPEC_02318 [Bacteroides pectinophilus ATCC 43243] Length = 285 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 99/290 (34%), Positives = 152/290 (52%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ L + + I R ++D+ + +PD +I+ AA Sbjct: 1 MKVLVTGADGQLGHDLVIELEKRGHTAIPTDRNEMDITDAEVVERVITDAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP-T 118 YTAVDKAE++ E+ +INA+G IA + D +G +YISTDYVFDG P + T Sbjct: 61 YTAVDKAEEDVEVCRNINAQGTRNIAASCDRLGCKMMYISTDYVFDGEGTRPWEPDDEVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PLN+YG++K GE+ V + I+R AWV+ + G+NF+ +MLRL K+ + VV DQ Sbjct: 121 TPLNVYGETKYEGEQAVRELVEKFFIVRIAWVFGVNGNNFVKTMLRLGKQNGAVKVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT ++ + + ++ G +H T + G SW +FA IF + G Sbjct: 181 IGSPTYTPDLSVLLCDMI-------ESDRYGTYHATNE-GLCSWYEFACEIFRAA---GM 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + + ++P KA RP S L+ KL R+ W++ V + Sbjct: 230 NDVKVTPVSSGEFPVKAKRPHNSRLNKDKLTANGFNRLPAWQDAVARYVK 279 >gi|182625742|ref|ZP_02953510.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens D str. JGS1721] gi|177909004|gb|EDT71486.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens D str. JGS1721] Length = 294 Score = 339 bits (870), Expect = 3e-91, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 156/302 (51%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELKSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G+ Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + + V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELAENK----CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|239628659|ref|ZP_04671690.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518805|gb|EEQ58671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 286 Score = 339 bits (869), Expect = 3e-91, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + +E V ++D+ + + PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGHDVMNELASRGIEGFGVDVEEMDITSKEACENVITGAKPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NAEG IAK ++ I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNLELCRKVNAEGTRNIAKVCKALDIKMMYISTDYVFNGGGERPWEPDDHRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE V + Y I+R AWV+ + G NF+ +MLRL KE+ +SVV DQ Sbjct: 121 PLNVYGLTKYEGEISVEQNVSRYFIVRIAWVFGVNGKNFIKTMLRLGKEKGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIFRQA---GMD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + + +P KA RP S + KL R+ +W++ + L Sbjct: 230 EVKVTPVDSSGFPAKAKRPQNSRMSKEKLTENGFERMPSWQDALGRYLK 278 >gi|70733808|ref|YP_257448.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] gi|68348107|gb|AAY95713.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] Length = 293 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 116/288 (40%), Positives = 161/288 (55%), Gaps = 2/288 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G +GQ+++ L E++ +GR +DL P+ + PD+IIN AA+T Sbjct: 6 KILISGQHGQVSRELQQRLGDLGELVVLGREQLDLSHPEQIRQQVRAIRPDLIINAAAHT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+A+ EP++AF+INA G A+ A +G+P I+ STDYVFDG TP E NPL Sbjct: 66 AVDQAQSEPDLAFAINATAPGIFAQEAFELGVPLIHYSTDYVFDGSKETPYVEDDEPNPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SKLAGE + ++ILRT+WVYS G NFLL+M RL +E+ E+ VV DQ G Sbjct: 126 SVYGESKLAGERAIRLVQGQHLILRTSWVYSSHGKNFLLTMQRLLQEKPELRVVADQIGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA + + GI+H+TA G SW FA+ I + P + Sbjct: 186 PTWAGTIATSTRALIERW-RAGQPGAWGIYHLTAH-GETSWFGFAQAIGEQLLAMDKPCA 243 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I + YPT A RP S LDCS+LA + W +R L Sbjct: 244 VLEAIPSSAYPTPAPRPLNSRLDCSRLAREWGVVQPDWHTALRECLAE 291 >gi|116749692|ref|YP_846379.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] gi|116698756|gb|ABK17944.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 168/288 (58%), Gaps = 3/288 (1%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+IG+ G + L+ Q + V R ++D+ P++ + P ++IN AAY Sbjct: 3 KILIIGHRGMLGTDLTERLRSQGFAVEGVDRDELDIAVPEEVLRCLETIRPRLVINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP AF++N +G IA A + P I+ISTDYVFDG + P E P NP Sbjct: 63 TAVDRAEGEPGAAFAVNRDGPAHIAAACGRLNSPLIHISTDYVFDGRASAPYKEDDPVNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SK GE V S N++I+RTAW++ G++F+ ++LRLA ER E+ +V DQ+G Sbjct: 123 VSVYGRSKWEGEAAVRSRLQNHLIVRTAWLFGANGNSFVKTILRLAAERAELRIVSDQYG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA-ERGGP 239 PT +A A+ ++ +++ + T G +H G VSW +FA I SA RGG Sbjct: 183 CPTWTGDLASALTGLSKRVLDGARTVPWGTYHYCGK-GAVSWYEFARAIVEASAFARGGK 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T YP A RPA+S LDC K+A+ I +W+EG+ ++ Sbjct: 242 MPAVVPIATADYPLPARRPAWSVLDCGKMASEFGIEPVSWREGLAVVI 289 >gi|282898470|ref|ZP_06306460.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] gi|281196636|gb|EFA71542.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Raphidiopsis brookii D9] Length = 303 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 120/296 (40%), Positives = 171/296 (57%), Gaps = 16/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ L + ++I +GR ++DL + + S PD+I+NPAAY Sbjct: 1 MKILLTGISGQVGWELQRSLMTVGDVICLGRNELDLSRCETITSTIREIKPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A SIN G +A+ A +G I+ STDYVFDG TP E T P Sbjct: 61 TAVDRAESEPDLAMSINGVAPGILAEEAKRLGGAIIHYSTDYVFDGNQNTPYKENDSTFP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YGK+KLAGE+ + + N++I RT+WVY + G+NFLL+M RLAKER EI VV DQ G Sbjct: 121 QNVYGKTKLAGEKAIQAVGVNHLIFRTSWVYGLRGNNFLLTMQRLAKEREEIRVVDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNL-----------IENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +PT + IA Q+ + + N GI+H++++ G SW FA+ I Sbjct: 181 SPTWSRMIAEVTAQMIAQIRCQMVISGGDYLANFMAEKGGIYHLSSE-GKTSWYGFAKAI 239 Query: 230 ----FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 F + ++ I T +YPT A RP YS LD KL +T ++IS W++ Sbjct: 240 LIDKFADDQYGQYKLQRLVPITTPEYPTPAPRPGYSLLDNQKLFDTFGLKISNWQQ 295 >gi|188589422|ref|YP_001922561.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] gi|188499703|gb|ACD52839.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] Length = 297 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 160/303 (52%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G NGQ+ L + + ++I + ++D+ + + Sbjct: 1 MKILITGCNGQLGNELQDIIKKGYAEIGEISNTLKEADVIALDIDELDITNLNEVNKKII 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 S +PDVIIN AA T VD E + AF +N+ G +A A + I + +STDYVF G+ Sbjct: 61 SLNPDVIINCAAATNVDGCESNEDFAFKVNSLGPRNLAMACEKIRAKLVQVSTDYVFSGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 S P+ E+ T P ++YGK+KL GE V + + Y I+RT+W+Y G+NF+ +M +L K Sbjct: 121 SEKPLTEYDLTAPYSVYGKTKLLGENYVREFCSKYFIVRTSWLYGYVGNNFVYTMRKLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ I+VV DQ G PT+A +A I+++ ++ G++H T G +W DFA+ Sbjct: 181 DKDTINVVNDQKGNPTNANDLAYHILKLI-------ESEEYGVYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I S E+ +V +++Y T A RP YS LD L NT + WK+ +++ + Sbjct: 233 MIIEISGEK----CEVNPCTSEEYKTPAKRPEYSSLDNMMLRNTVGDEMRHWKDAIKSFI 288 Query: 288 VNI 290 + Sbjct: 289 EKL 291 >gi|289577888|ref|YP_003476515.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9] gi|289527601|gb|ADD01953.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter italicus Ab9] Length = 298 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 154/303 (50%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------------VEII-RVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+A L S+ + +I ++D+ F Sbjct: 1 MKILITGARGQLALQLRSIIEKGRSEIGEIDPIYKYAVIKYTSHDELDITDLTSVLRFVD 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VDK E + + AF +NA G +A AA +G +++STDYVF+G Sbjct: 61 EYRPDIIINCAAYTNVDKCESDVDTAFKVNAIGPRNLAIAAQRVGAKLLHVSTDYVFNGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ S+L+ AK Sbjct: 121 GNVPFREYDVPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVYSILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAHHILKLIL-------TEEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V I + + A RP YS LD L T + WK+ ++ + Sbjct: 233 KIVEYA----GINCTVVPITSDKINRPAKRPFYSSLDNMMLRCTVGDEMRNWKDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 EDL 291 >gi|224823817|ref|ZP_03696926.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] gi|224604272|gb|EEG10446.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] Length = 296 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 111/293 (37%), Positives = 165/293 (56%), Gaps = 5/293 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G+NGQ+ L E+I + R ++DL P + + P +I+NPAAYT Sbjct: 3 RILITGSNGQVGFELKHALAPLGEVIALTRQEMDLADPASILAALNRYQPAIIVNPAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A +INA+ G +A+ A+ I+ STDYVFDG E NP Sbjct: 63 AVDKAETEVELAMAINAKAPGVMAEWAEQHDALLIHYSTDYVFDGNKDGAYCEDDTANPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK GE+ + + T +++ILRT+WV G NFL ++LRLA ER ++VV DQ G Sbjct: 123 SVYGRSKWEGEQAIRTCTAHHLILRTSWVVGAHGGNFLKTILRLAHERDSLNVVVDQIGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT A IA Q+ +D G +H+TA G SW D+A ++ + ++ P Sbjct: 183 PTPAALIADITAQLISCYRLPTDQFNYGTYHLTA-SGETSWYDYARFVVRLAEQQRCPLR 241 Query: 241 ---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S + I T YP A RPA S LDCSKL++ + + W++GV +++ + Sbjct: 242 LAASAIRPISTSDYPLPAPRPANSRLDCSKLSHHFGLALPHWQQGVAHVVSQL 294 >gi|148643364|ref|YP_001273877.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii ATCC 35061] gi|148552381|gb|ABQ87509.1| dTDP-4-dehydrorhamnose reductase, RfbD [Methanobrevibacter smithii ATCC 35061] Length = 280 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 102/287 (35%), Positives = 157/287 (54%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+NG + L+ + E+I +D+ + F PD++IN AAY Sbjct: 1 MKVLITGSNGMLGHDLTDVLNDKHELILTTSKTLDITDKEHTVEFIKENKPDIVINSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E+ ++AFS+N EG +A P ++ISTDYVF+G + TP E P Sbjct: 61 TNVDGCEENQKLAFSVNGEGVRNLAIGCREADCPLVHISTDYVFNGKNDTPWVEDDEIGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YGKSKL GEE + + + I+RTAW+Y I G NF +ML LAK E++VV D+ G Sbjct: 121 ISVYGKSKLEGEEAIQEILDKFFIVRTAWLYGINGGNFPKTMLELAKTHDELTVVYDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT L +A AI ++ +T GI+H+T + G SW +FA+YIF + Sbjct: 181 TPTYTLDLAEAIGKLI-------ETDYYGIYHIT-NSGSCSWCEFAKYIFEVAEV----D 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ A RP+YS L+ + + + ++KE +++ L Sbjct: 229 VKVTPVTASEFARPAPRPSYSVLNNKRWVDNGFEPLRSYKEAIKDYL 275 >gi|255008051|ref|ZP_05280177.1| putative dTDP-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313145768|ref|ZP_07807961.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134535|gb|EFR51895.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 287 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ ++D+ + ++ DVI+N A Sbjct: 1 MNILVTGANGQLGNEMQVLAKENLQHTYFFTDVQELDICDEQAVYAYVSEHKIDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E +N G +A+AA + G I +STDYVFDG + P E PT Sbjct: 61 AYTAVDKAEDDAEFCDKLNNVAPGYLARAAQANGAAMIQVSTDYVFDGTAHIPYTEDQPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE+ V ++ +++RTAW+YSI+G+NF+ +M+RL +ER V+ DQ Sbjct: 121 CPTSVYGSTKLTGEQNVMNHCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESFGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I +RGI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLALAIFAALNKGI------VRGIYHFS-DEGVCSWYDFTIAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T YP KA RP YS LD +K+ T I I W+E ++ + + Sbjct: 231 TSCKVKPLHTADYPAKAPRPHYSVLDKTKIKETFGIEIPHWEESLKRCINQL 282 >gi|288870311|ref|ZP_06113670.2| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288867636|gb|EFC99934.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 284 Score = 339 bits (869), Expect = 4e-91, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 147/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ + + E I V ++D+ + +P+ +I+ AA Sbjct: 5 MRVFVTGVKGQLGHDVVDELEKRGHEAIGVDIDEMDITDAESVNRVIREAAPEAVIHCAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NA G IAK + I +YISTDYVF+G P + Sbjct: 65 YTAVDAAEDNLELCRRVNAYGTENIAKVCRELDIKMMYISTDYVFNGQGTRPWEPDDERE 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +K GE + Y +R AWV+ + G NF+ +ML L K +I+VV DQ Sbjct: 125 PLNVYGLTKYEGELAIEENLTKYFTVRIAWVFGVNGRNFIKTMLNLGKTHDKITVVSDQI 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + +T G +H T + G SW DFA+ IF ++ G Sbjct: 185 GSPTYTYDLARLLVDMI-------ETDRYGRYHATNE-GLCSWCDFAKEIFKQA----GM 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP++A RP S + KL R+ +W++ + L I Sbjct: 233 KVEVVPVTSEEYPSRAKRPMNSRMSKDKLEANGFERLPSWQDALGRYLKEI 283 >gi|158333988|ref|YP_001515160.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017] gi|158304229|gb|ABW25846.1| dTDP-4-dehydrorhamnose reductase [Acaryochloris marina MBIC11017] Length = 304 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 114/295 (38%), Positives = 162/295 (54%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ Q L E+I VG+ +DL P+ L PD+I+N AAYT Sbjct: 5 RILLLGAQGQLGQELQKTLPTMGELIAVGKETVDLAVPEQLHEAILPVQPDIIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E ++A ++N + +A+ A ++G I+ISTDYVFDG P E +P Sbjct: 65 AVDRAESEVKLAHTVNQKAPTVLAELAQTLGALLIHISTDYVFDGTQSHPYTESDAPHPQ 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 ++YG SK GEE + + ++ILRTAWVY G NF+ +MLRL +ER ++ VV DQ G Sbjct: 125 SVYGHSKWQGEEGIRQTWDQHIILRTAWVYGTQGKGNFVKTMLRLGRERSDVRVVDDQVG 184 Query: 181 TPTSALQIARAIIQIAHNLIENS---DTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 TPT A +I AI + H+ + L G +H T + G SW DFA IF E+ G Sbjct: 185 TPTWAKEIGDAIASLIHHWSTSDPVTQAELYGTYHFT-NRGVASWYDFAVAIFAEAQALG 243 Query: 238 GPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +V I T +YP A RPAYS L K+ W++ +R +L + Sbjct: 244 VPLQIERVIPITTPEYPLPAPRPAYSVLSNCKITPILGQPAPHWRQSLRQMLQEL 298 >gi|167765062|ref|ZP_02437175.1| hypothetical protein BACSTE_03448 [Bacteroides stercoris ATCC 43183] gi|167696690|gb|EDS13269.1| hypothetical protein BACSTE_03448 [Bacteroides stercoris ATCC 43183] Length = 284 Score = 338 bits (868), Expect = 5e-91, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRVLSAENQQHTYFFTDVQELDICDEQAIRAFVTDNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG+ P E Sbjct: 61 AYTAVDKAEDNPELCNKLNHIAPGYLAAAAEACGAAMIQVSTDYVFDGIGHIPYTEEVTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YSI+G+NF+ +M+RL ER + VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMEKCSRAMVIRTAWLYSIYGNNFVKTMIRLGNERERLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + + G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAVNQGI------VPGIYHFSNE-GVCSWYDFTVAIHRMA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T I I W++ ++ + + Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIEIPHWEDSLQVCIDRL 282 >gi|218288133|ref|ZP_03492432.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] gi|218241492|gb|EED08665.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + L + DVE+I R ++D+ + + PDV+I+ AA Sbjct: 1 MKILVTGAGGQLGRELVRYPKLADVEMIGCTRAEMDVTHLEAVREKLRAVRPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE P A+ +NA G +A AA+ +G YISTDYVFDGL+ P +E+ TN Sbjct: 61 YTKVDLAESCPADAYRVNALGTRNVAVAAEEVGAKVCYISTDYVFDGLTDRPYNEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK AGE V + + I+RT+WV+ +G NF+ ++L A+ + VV DQ Sbjct: 121 PLSVYGKSKRAGEILVQGLCSRWFIVRTSWVFGKYGPNFVKTILTKARAGEPLRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR +I + T GI+H T + G SW +FA I E+A Sbjct: 181 GSPTYTKDLARFLIDLVR-------TEAYGIYHAT-NQGQCSWYEFACAILEEAAV---- 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +P A RP +S L + L + W++ ++ L + Sbjct: 229 TTAIEPCTTDAFPRPAPRPKFSVLAQTMLLAEGFTPLRPWRDALQEFLREL 279 >gi|12232610|gb|AAG49405.1| dTDP-4-rhamnose reductase [Aggregatibacter actinomycetemcomitans] Length = 292 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 120/287 (41%), Positives = 164/287 (57%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ L+ EI+ V ++D+ +F PDV+IN AA+T Sbjct: 3 KFLITGANGQVGYCLTQQLQGRHEILAVDHDELDITNQSAVKKTVENFCPDVVINAAAHT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E +P Sbjct: 63 AVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAADPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYGK+KLAGE+ V + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ G Sbjct: 123 GIYGKTKLAGEQAVVEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT A IA A+IQIA +I ++ GI+H T VSW DFA IF E+ + Sbjct: 183 PTYAGDIAAALIQIAEKIIA-GESVEYGIYHFTG-LPYVSWCDFARAIFDEAVSQNMLEK 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 APLVNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 287 >gi|169342325|ref|ZP_02863396.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens C str. JGS1495] gi|169299550|gb|EDS81613.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens C str. JGS1495] Length = 295 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+ + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVRALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + IG + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMICEEIGAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + + V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELAENK----CIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 KN 290 >gi|224540562|ref|ZP_03681101.1| hypothetical protein BACCELL_05476 [Bacteroides cellulosilyticus DSM 14838] gi|224517812|gb|EEF86917.1| hypothetical protein BACCELL_05476 [Bacteroides cellulosilyticus DSM 14838] Length = 285 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 158/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ + + DV++N A Sbjct: 1 MRVLVTGANGQLGNEMQVLAKENPQHTYFFTDVQELDICDEQAVQACIAENQIDVVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N E G +A+AA + G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDNEELCRKLNQEAPGILARAAQAHGAAMIQVSTDYVFDGTAHIPYKEDCEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V +++RTAW+YSI+G+NF+ +M+RL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLGGEKEVMQNCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI + I + GI+H + D G SW DF I + Sbjct: 181 IGTPTYANDLAQAIYAAINQGI------VPGIYHFS-DEGVCSWYDFTVAIHRIADI--- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T I + W+E ++ + + Sbjct: 231 TTCKVSPLHTDEYPAKAPRPHYSVLDKTKIKKTFGIEVPHWEESLKVCIEKL 282 >gi|332828457|gb|EGK01162.1| dTDP-4-dehydrorhamnose reductase [Dysgonomonas gadei ATCC BAA-286] Length = 317 Score = 338 bits (867), Expect = 7e-91, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 157/292 (53%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 L+ G NGQ+ + + + + ++D+ + F + I+N A Sbjct: 29 NILITGANGQLGNEIRRIASFHENNFQFFFTDVAELDITDQQAIEDFIRENNIKYIVNCA 88 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ + + IN + + AA + G I+ISTDYV+DG + P E Sbjct: 89 AYTAVDKAEDDVALCYRINRDAVANLGAAATNNGSKIIHISTDYVYDGTASKPYTETDEV 148 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP ++YGKSK GE + + +I+RTAW+YSIFG+NF+ +M++ KER ++VV DQ Sbjct: 149 NPQSVYGKSKQEGEAALIKACPDSIIIRTAWLYSIFGNNFVKTMMKYGKERDTLNVVADQ 208 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A AII+I NS T GI+H + + G +W DF I + G Sbjct: 209 TGTPTNAGDLANAIIKILDYSEANSFT--PGIYHYSNE-GITTWYDFTLAIHKHA---GI 262 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T QYPTKA RP YS LD +K+ T I I W++ + + + Sbjct: 263 INCTVNPITTDQYPTKATRPKYSVLDKTKIKTTFKITIPEWEKSLNICIKEL 314 >gi|294776938|ref|ZP_06742399.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] gi|294449186|gb|EFG17725.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] Length = 285 Score = 337 bits (866), Expect = 7e-91, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + + + ++D+ + +F + VI+N Sbjct: 1 MKNILVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E Sbjct: 61 AAYTAVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKHLPYNEGDI 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +MLRL KE+ + VV D Sbjct: 121 PCPNSVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMLRLGKEKETLGVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +ARAI + + + G++H + D G SW DF + I + G Sbjct: 181 QIGTPTYARDLARAIFTAIYKGV------VPGVYHFS-DEGVCSWYDFTKAIHRIA---G 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T+NI I W+E + + + Sbjct: 231 ITTCKVSPLHTNEYPAKAPRPHYSVLDKTKIKTTYNIEIPHWEESLEACIKEL 283 >gi|150002683|ref|YP_001297427.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|254882184|ref|ZP_05254894.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643256|ref|ZP_07997884.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_40A] gi|149931107|gb|ABR37805.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|254834977|gb|EET15286.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317385160|gb|EFV66111.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_40A] Length = 285 Score = 337 bits (866), Expect = 8e-91, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + + + ++D+ + +F + VI+N Sbjct: 1 MKNILVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E Sbjct: 61 AAYTAVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKHLPYNEGDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +MLRL KE+ + VV D Sbjct: 121 PCPNSVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMLRLGKEKETLGVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +ARAI + + + G++H + D G SW DF + I + G Sbjct: 181 QIGTPTYARDLARAIFTAIYKGV------VPGVYHFS-DEGVCSWYDFTKAIHRIA---G 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T+NI I W+E + + + Sbjct: 231 ITTCKVSPLHTNEYPAKAPRPHYSVLDKTKIKTTYNIEIPHWEESLEACIKEL 283 >gi|168211916|ref|ZP_02637541.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens B str. ATCC 3626] gi|170710142|gb|EDT22324.1| dTDP-4-dehydrorhamnose reductase [Clostridium perfringens B str. ATCC 3626] Length = 294 Score = 337 bits (866), Expect = 8e-91, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 154/302 (50%), Gaps = 25/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G+NGQ+ L S+ ++ E+I + +D+ ++ + Sbjct: 1 MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLN 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN AA T VD E + AF +N+ GA +A + I + +STDYVF G Sbjct: 61 EEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIVAKLVQVSTDYVFSGF 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P+ EF T P ++YGK+KL GE V + + Y I+RTAW+Y G NF+ +M+RL K Sbjct: 121 GEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PT A +A I+++ +T GI+H T G +W DFA+ Sbjct: 181 EKESLNVVNDQKGNPTHANDLAYHILKLI-------ETEEYGIYHCTGK-GECTWYDFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V +++Y T A RP YS LD L T + WKE +++ Sbjct: 233 EIMELA----GNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFF 288 Query: 288 VN 289 N Sbjct: 289 EN 290 >gi|317472317|ref|ZP_07931645.1| RmlD substrate binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316900274|gb|EFV22260.1| RmlD substrate binding domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 281 Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + E I V ++D+ + + D +I+ AA Sbjct: 1 MKALVTGAAGQLGHDVMDELKKRGHEGIGVDVQEMDVTDAEKVRQVITAADVDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ INA+G IA+ + + +YISTDYVFDG P D N Sbjct: 61 YTAVDAAEDNAELCRKINADGTEHIARVCRDLDLKMMYISTDYVFDGQGERPWDPDDERN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + I+R AWV+ + G NF+ +ML LAK ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEQNLDKFFIVRIAWVFGMNGKNFIKTMLNLAKNHDRLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + +T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMI-------ETEKYGRYHATNE-GICTWYEFACEIFKQA----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA RP S + KL R+ W++ + L I Sbjct: 229 EIEVAPVGSDEYPAKAKRPENSRMSKDKLTQNGFERLPAWQDALARYLKEI 279 >gi|323525017|ref|YP_004227170.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] gi|323382019|gb|ADX54110.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] Length = 308 Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 153/292 (52%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L+ ++ V R +DL + P +I+NPAAYTA Sbjct: 10 ILVTGVNGQVGYELARTLQGLGRVVAVDRSTLDLSNLDQIRAVVRDVKPALIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE+A IN E G +A+ A +G I+ STDYVFDG + E PTNP N Sbjct: 70 VDKAEQEPELAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFDGEKQDAYVESDPTNPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++KLAGE +A+ ++++LRT+WVY G NFLL+MLRL +R E+ VV DQFG P Sbjct: 130 AYGRTKLAGERAIAATGVDHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T IA IA D + G++H+ SW FA IF + Sbjct: 190 TWCNTIATLTAHIAAQSFAAPDANSWWQERSGVYHLCC-ADSTSWHGFASAIFELADLPN 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I +YPT A RP+ S + +KLA + W+E +R L + Sbjct: 249 RPST--LPIPAAEYPTPAKRPSNSRMSNAKLAQVFGLAAPHWREALRLCLTD 298 >gi|52696135|pdb|1VL0|A Chain A, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution gi|52696136|pdb|1VL0|B Chain B, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution gi|52696137|pdb|1VL0|C Chain C, Crystal Structure Of A Dtdp-4-Dehydrorhamnose Reductase, Rfbd Ortholog (Ca_c2315) From Clostridium Acetobutylicum Atcc 824 At 2.05 A Resolution Length = 292 Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 111/287 (38%), Positives = 156/287 (54%), Gaps = 14/287 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ + + ++VE+I D+D+ FF P+V+IN AA+ Sbjct: 14 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAH 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDK E++ ++A+ INA G +A AA S+G + ISTDYVFDG ++ PI EF NP Sbjct: 74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNP 133 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YGK+KL GE V + Y I+RTAW+Y G+NF+ + + L K E+ VV DQ G Sbjct: 134 QSAYGKTKLEGENFVKALNPKYYIVRTAWLYGD-GNNFVKTXINLGKTHDELKVVHDQVG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPTS + +AR ++++ D G FH T G SW DFA IF + G Sbjct: 193 TPTSTVDLARVVLKVI-------DEKNYGTFHCTCK-GICSWYDFAVEIFRLT----GID 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV T+++P A RP YS L L T WKE ++ + Sbjct: 241 VKVTPCTTEEFPRPAKRPKYSVLRNYXLELTTGDITREWKESLKEYI 287 >gi|229512767|ref|ZP_04402235.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21] gi|229350277|gb|EEO15229.1| dTDP-4-dehydrorhamnose reductase [Vibrio cholerae TMA 21] Length = 296 Score = 337 bits (866), Expect = 9e-91, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 170/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA A++ +A +++ T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 CGGPTYAGDIANALLMMAKAIVDGKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQATLNHLI 290 >gi|329960133|ref|ZP_08298597.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] gi|328533085|gb|EGF59858.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] Length = 282 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 155/292 (53%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + ++ ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMQVLSRENLQHTYFFTDVQELDICDEQAVRAFVADNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED E+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNAELCDKLNHLAPGYLASAAEACGAALIQVSTDYVFDGTGHIPYTEEMTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE V + +I+RTAW+YS++G+NF+ +MLRL +ER + VV DQ Sbjct: 121 CPNSVYGSTKLDGERAVMEKCSRAMIIRTAWLYSVYGNNFVKTMLRLGRERETLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A I + ++ I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYAKDLACVIFEAINHGI------VPGIYHFS-DEGVCSWYDFTLAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T ++P KA RP YS LD +K+ T I I W+E + + + Sbjct: 231 STCKVSPLHTDEFPAKAPRPNYSVLDKTKIKKTFGIEIPHWEESLVACMKKL 282 >gi|21673146|ref|NP_661211.1| dTDP-4-dehydrorhamnose reductase [Chlorobium tepidum TLS] gi|21646223|gb|AAM71553.1| dTDP-4-dehydrorhamnose reductase [Chlorobium tepidum TLS] Length = 292 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 153/292 (52%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L + E + P++D+ I+N A Sbjct: 1 MNILVTGSRGQLGSELQKLQEVHGWQEWFFMDLPELDITDALAVERVCRDRRIGAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE + E AF +N +GA +A A +G +++STDYVFDG S P E P Sbjct: 61 AYTAVDRAESDAEAAFRVNRDGAAVLAAVAMEVGALLLHVSTDYVFDGSSNRPYCEDDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SK GEE + + +Y+ILRTAW+YS++G NF+ +MLRL ER+ + VV DQ Sbjct: 121 APCGVYGLSKWEGEEAIRASGCSYIILRTAWLYSVYGQNFVKTMLRLGSERQSLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A I+ I + S FH + + G SW DFA+ I + G Sbjct: 181 VGSPTWAADLAGTIVSILDQ--CDPVRSYSETFHYSNE-GVCSWYDFAKSIM----DAEG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I + YPT A RP +S L+ K+ +T + I W + + +L + Sbjct: 234 LSCKVLPIESSNYPTPARRPHFSVLNKRKIKSTLGLEIPYWHDSLLRMLTEL 285 >gi|225574470|ref|ZP_03783080.1| hypothetical protein RUMHYD_02545 [Blautia hydrogenotrophica DSM 10507] gi|225038320|gb|EEG48566.1| hypothetical protein RUMHYD_02545 [Blautia hydrogenotrophica DSM 10507] Length = 281 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + + E + V ++D+ + D +++ AA Sbjct: 1 MRVLVTGVKGQLGYDVMNELAKRGYEGVGVDVDEMDITDARKVDEVITKAQVDKVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NAEG IAK + +P +Y+STDYVFDG P + + Sbjct: 61 YTAVDAAEDNVELCRRVNAEGTENIAKVCKRLDLPMVYLSTDYVFDGEGERPWEPDDERD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + Y I+R AWV+ + G NF+ +ML LA+ I+VV DQ Sbjct: 121 PLNVYGQTKYEGELAVERNLDKYFIVRIAWVFGVNGKNFIKTMLNLAQNHDTITVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + +T G +H T + G +W +FA+ IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMI-------ETEKYGRYHATNE-GLCTWYEFAKEIFRQA----GV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV + ++Q+ KA RP S ++ KL R+ +W++ + L Sbjct: 229 DVKVVPVTSEQFQAKARRPHNSRMNKDKLEAMGFQRLPSWQDALSRYLK 277 >gi|323135558|ref|ZP_08070641.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242] gi|322398649|gb|EFY01168.1| dTDP-4-dehydrorhamnose reductase [Methylocystis sp. ATCC 49242] Length = 299 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 133/289 (46%), Positives = 174/289 (60%), Gaps = 1/289 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + V G GQ+ +L DVE+I +GRP DL + D I+N AAYT Sbjct: 7 RLAVTGLTGQVVSALIERAPNDVEMIALGRPQFDLGVRDAVLATLRQTGCDAIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A +N EGAG +A+AA +G+P +++STDYVFDG P E PT P Sbjct: 67 AVDKAESEPDVAMRVNGEGAGNVAEAAAELGVPLLHLSTDYVFDGARDRPYREDDPTGPT 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG+SKLAGEEK+A+ N+ ILRTAWVYS FG+NF+ +MLRL + R E+ VV DQ G Sbjct: 127 GAYGRSKLAGEEKIAAIHPNHAILRTAWVYSPFGANFVKTMLRLGETREEVGVVADQLGN 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+A+ IA A+I IA L + LRG+FHMT G +WADFAE F + G Sbjct: 187 PTNAIDIADALIVIARRLAADPSPELRGVFHMTGQ-GEATWADFAESTFAIAERFGRKPV 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V RI T YPT A RPA S LD +KL + + W+ + N + + Sbjct: 246 RVKRITTADYPTPARRPANSRLDNTKLNERFGVALPLWRASLENCVARL 294 >gi|329956905|ref|ZP_08297473.1| dTDP-4-dehydrorhamnose reductase [Bacteroides clarus YIT 12056] gi|328523662|gb|EGF50754.1| dTDP-4-dehydrorhamnose reductase [Bacteroides clarus YIT 12056] Length = 286 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 110/292 (37%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + ++ ++ ++D+ + +F DVI+N A Sbjct: 1 MNILVTGANGQLGNEMRALSAENQQHTYFFTDVQELDICDEQAIRTFVAGNRVDVIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED PE+ +N G +A AA++ G I +STDYVFDG P E Sbjct: 61 AYTAVDKAEDNPELCDKLNHVAPGYLAAAAEACGAAMIQVSTDYVFDGTGHIPYTEEVTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V + +++RTAW+YS++G+NF+ +M+RL ER ++ VV DQ Sbjct: 121 CPNSVYGSTKLAGEQAVMEKCSRAMVIRTAWLYSVYGNNFVKTMIRLGNEREKLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +ARAI + I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYANDLARAIFAAINRGI------VPGIYHFS-DEGVCSWYDFTVAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T I I W+E ++ + + Sbjct: 231 TSCKVSPLHTDEYPAKAPRPQYSVLDKTKIKKTFGIGIPHWEESLQVCIERL 282 >gi|271499810|ref|YP_003332835.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech586] gi|270343365|gb|ACZ76130.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech586] Length = 285 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 117/292 (40%), Positives = 158/292 (54%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + ++ +D+ + S+ PD I+N AAY Sbjct: 1 MKVLLTGANGQLGRCFQDRLPHGWSVLATDADSLDIADEAQVQATVKSWQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A IN G +A+AA G I++STDYVFDG + P E T+P Sbjct: 61 TAVDKAESEPELAARINVAGPEYLARAARQQGARFIHVSTDYVFDGTATRPYIETDTTHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE V I+RTAWV+S +G+NF+ +MLRL +ER + VV DQ G Sbjct: 121 LGVYGQTKLDGERVVLKVNPAAQIVRTAWVFSEYGNNFVKTMLRLGRERESLGVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A IA AII + + G++H D VSW FA IF + E+ Sbjct: 181 CPTYAGDIADAIISLLQQQADG------GLYHFCGDE-EVSWHKFASTIFTLAHEQQVLA 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+QYPT A RPAYS LDC+K+A I S W+ + I+ + Sbjct: 234 RVPVVNAITTEQYPTPAARPAYSTLDCAKIAR-LGIPPSAWRAALSTIIPKL 284 >gi|189466783|ref|ZP_03015568.1| hypothetical protein BACINT_03159 [Bacteroides intestinalis DSM 17393] gi|189435047|gb|EDV04032.1| hypothetical protein BACINT_03159 [Bacteroides intestinalis DSM 17393] Length = 285 Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 158/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ + DV++N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYFFTDVQELDICDEHAVRACIAGNQIDVVVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAED E+ +N E G +A+AA + G I +STDYVFDG + P E Sbjct: 61 AFTAVDKAEDNEELCRKLNEEAPGILARAAQAYGAAMIQVSTDYVFDGTAHIPYKEDCMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE++V +++RTAW+YSI+G+NF+ +M+RL +ER + VV DQ Sbjct: 121 CPNSVYGFTKLGGEKEVMQNCEKAMVIRTAWLYSIYGNNFVKTMIRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI + I + GI+H + D G SW DF I + G Sbjct: 181 IGTPTYAKDLAVAIYAAINQGI------VPGIYHFS-DEGVCSWYDFTVAIHRIA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ NT I I W+E ++ + + Sbjct: 231 TTCKVSPLHTDEYPAKAPRPHYSVLDKTKIKNTFGIHIPHWEESLKVCIDKL 282 >gi|330505517|ref|YP_004382386.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] gi|328919804|gb|AEB60635.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] Length = 292 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 171/290 (58%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L + + + E+I +GR D DL +P+ + P ++IN AAY Sbjct: 1 MKILISGHTGQVARELQ-LALHEHELISLGRQDFDLSRPQSLRETIMRQRPALVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E+AF+INAE GA+A A + IP I+ STDYVFDG TP E P Sbjct: 60 TAVDQAEQERELAFAINAEAPGAMADACFELDIPLIHYSTDYVFDGSKATPYREADTPRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK+AGE+ + +++ILRT+WVYS G NFLL+MLRL +ER E+SVV DQ G Sbjct: 120 LGVYGASKVAGEQALRISGCDHLILRTSWVYSQHGRNFLLTMLRLLQEREELSVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A ++ + G FH+T G SW FA I G P Sbjct: 180 APTWAGSIASATAEMIDKWQQGR--HRWGTFHLTCQ-GETSWFGFASAIAEHLRTAGKPC 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I + +YPT A RP S LD ++L IR+ W++ ++ L ++ Sbjct: 237 ARLRPIPSSEYPTPAQRPLNSRLDGARLEEEWQIRLPDWQQALQQCLNDM 286 >gi|261210464|ref|ZP_05924758.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. RC341] gi|260840522|gb|EEX67088.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. RC341] Length = 296 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 170/291 (58%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLRTMKEVEFLAVDRDQLDITHSAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA IG ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKIGAAILHISTDYVFSGDKPNPYLETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 APQGVYGESKLAGEIAVAQACTRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT + IA A++ +A ++E T+ G++H + VSW +FA IF ++ ++G Sbjct: 182 HGGPTYSGDIANALLTMAKAIVEWKSTA-FGVYHFSG-LPHVSWHEFACTIFDKARDQGI 239 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YPT A RPA S LD K+ + S W+ + +++ Sbjct: 240 LNKSLQVNAITTQEYPTPAKRPANSRLDTQKIHQHFGVVASDWQAALNHLI 290 >gi|169351577|ref|ZP_02868515.1| hypothetical protein CLOSPI_02357 [Clostridium spiroforme DSM 1552] gi|169291799|gb|EDS73932.1| hypothetical protein CLOSPI_02357 [Clostridium spiroforme DSM 1552] Length = 280 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C + D++ I V ++D+ K S + D +I+ AA Sbjct: 1 MKLLVTGVKGQLGYDIVNECKRRDIDAIGVDVEEMDITDAKKVDEVIKSGNYDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E +N +G IA + IP +Y STDYVFDG P E+ Sbjct: 61 WTAVDKAEDEVEACTKVNVDGTKNIANVCKELNIPMMYFSTDYVFDGQGDQPWHEYDKRY 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + + I+R AWV+ + G+NF+ +MLRL KER +SVV DQ Sbjct: 121 PLNVYGQTKYEGELAVEAL-EKHFIVRIAWVFGVNGNNFIKTMLRLGKERGAVSVVNDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T G +H T + G SW +FA IF ++ Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGTYHATNE-GLCSWYEFACEIFKQAK----L 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + L R+ TW++ +R L I Sbjct: 228 DVEVTPVDSNAFPAKAKRPNNSRMSKEMLDKNGFDRLPTWQDALRRYLKEI 278 >gi|150026506|ref|YP_001297332.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium psychrophilum JIP02/86] gi|149773047|emb|CAL44531.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium psychrophilum JIP02/86] Length = 284 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 166/285 (58%), Gaps = 7/285 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G +GQ+ QS+ + + E I +D+ + + FF + D IN A Sbjct: 1 MVILVTGASGQLGQSIQYIASNYANCEFIFASSTALDITNKEAVSHFFNTNKIDFCINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E E A +IN G +A + I+ISTD+VFDG S P E T Sbjct: 61 AYTAVDKAELETEKAEAINVAGPKNLAVLCKKHQVKLIHISTDFVFDGASNKPYLETDIT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL IYGK+KL GE+ V + T+ Y I+RT+WVYS FG+NF+ +MLRLA ER +S+V DQ Sbjct: 121 NPLGIYGKTKLDGEQAVINNTDEYFIIRTSWVYSQFGNNFMKTMLRLASERDSLSIVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT+A+ +A+AI+QI + ++ GI++ + + G SW DFA IF Sbjct: 181 IGSPTNAVDLAKAIMQIIAKTQHPTASTAYGIYNFSNE-GIASWYDFAVEIF----RINN 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 V I ++ +PT A RP YS LD SK+ NT I I TW+E + Sbjct: 236 VVIDVNPILSEAFPTPAKRPKYSLLDKSKIKNTFGIEIKTWQESL 280 >gi|212691001|ref|ZP_03299129.1| hypothetical protein BACDOR_00491 [Bacteroides dorei DSM 17855] gi|237712510|ref|ZP_04542991.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726686|ref|ZP_04557167.1| conserved hypothetical protein [Bacteroides sp. D4] gi|212666233|gb|EEB26805.1| hypothetical protein BACDOR_00491 [Bacteroides dorei DSM 17855] gi|229435212|gb|EEO45289.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453831|gb|EEO59552.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 285 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 111/293 (37%), Positives = 160/293 (54%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + + + ++D+ + +F + VI+N Sbjct: 1 MKNILVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P +E Sbjct: 61 AAYTAVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKYLPYNEGDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +M+RL KE+ + VV D Sbjct: 121 PCPNSVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMIRLGKEKETLGVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +AR I + + + G++H + D G SW DFA+ I + G Sbjct: 181 QIGTPTYARDLARVIFTAIYKGV------VPGVYHFS-DEGVCSWYDFAKAIHRIA---G 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T+NI I W+E + + + Sbjct: 231 ITTCKVSPLHTNEYPAKAPRPHYSVLDKTKVKTTYNIEIPHWEESLEACIKEL 283 >gi|218290278|ref|ZP_03494424.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] gi|218239633|gb|EED06825.1| dTDP-4-dehydrorhamnose reductase [Alicyclobacillus acidocaldarius LAA1] Length = 281 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 153/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + L + DVE+I R ++D+ + + PDV+I+ AA Sbjct: 1 MKILVTGAGGQLGRELVRYPKLADVEMIGCTRAEMDVTHLEAVREKLRAVRPDVVIHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE P A+ +NA G +A AA+ +G Y+STDYVFDG + P E+ TN Sbjct: 61 YTKVDLAESCPADAYRVNALGTRNVAVAAEEVGAKVCYVSTDYVFDGQADRPYGEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK AGE V + + I+RT+WV+ +G NF+ ++L A+ + VV DQ Sbjct: 121 PLSVYGKSKRAGEILVQGLCSRWFIVRTSWVFGKYGPNFVKTILTKARAGEPLRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR +I + T GI+H T + G SW +FA I E+A Sbjct: 181 GSPTYTKDLARFLIDLVR-------TEAYGIYHAT-NQGQCSWYEFACAILEEAAV---- 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +P A RP +S L + L + W++ ++ L + Sbjct: 229 TTAIEPCTTDAFPRPAPRPKFSVLGQTMLLAEGFTPLRPWRDALQEFLREL 279 >gi|294775786|ref|ZP_06741288.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] gi|294450372|gb|EFG18870.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus PC510] Length = 286 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVRNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + + +N+IE + +G++H + + G SW DFA+ I S G Sbjct: 181 GTPTYAGD----LAALIYNIIEENLLDRQGVYHFSNE-GVCSWYDFAKEICELS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|29726035|gb|AAO88959.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 296 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 122/287 (42%), Positives = 166/287 (57%), Gaps = 4/287 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K + G NGQ+ L+ V ++ + R +D+ L+F+PDVIIN AAYT Sbjct: 8 KVALTGANGQLGYQLAKKLADKVTLLALDRAALDIANNGQVEKTLLAFAPDVIINAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A +IN G +AK A + I++STDYVFDG S P E PTNP Sbjct: 68 AVDKAEQERELAKAINETGPQNMAKVAAKLDAVLIHVSTDYVFDGQSDKPYVETDPTNPQ 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +IYG++KL GE+ V Y ++ILRTAWV++ G+NF+ +MLRLA+ + E+ VV DQ G Sbjct: 128 SIYGQTKLNGEQAVVKYCAKHIILRTAWVFAEHGNNFVKTMLRLAQSQPELGVVADQMGG 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A IA AII + L ++ GI+H + VSW FA IF + ++ Sbjct: 188 PTYAGDIAEAIISMVAQLSAENE-QNYGIYHYSG-APYVSWHQFACSIFQHAVQQQLIAQ 245 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV I T QYPT A RPA+S LDCSK+ + S W+ + N+ Sbjct: 246 APKVNAITTAQYPTPAKRPAFSMLDCSKIQQAFAVSPSNWQAALNNL 292 >gi|158605288|gb|ABW74898.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Sphingomonas sp. ATCC 53159] Length = 288 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 132/290 (45%), Positives = 184/290 (63%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G++GQ+AQSL+ V E++ P+ DL KP+ + PD+I++ AAY Sbjct: 1 MRILVTGHDGQVAQSLAEQAV-GHELVFTTYPEFDLSKPETIEAGVARVHPDLIVSAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A +IN +G G +A+A IG P I++STDYVFDG P E PT P Sbjct: 60 TAVDKAESEPELAMAINGDGPGVLARAGAKIGAPIIHLSTDYVFDGSLDRPWREDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +KLAGE+ V + ++R AWVYS FG+NF+ +MLRLA+ R ++VV DQ+G Sbjct: 120 LGVYGATKLAGEQAVQASGATNAVIRLAWVYSPFGNNFVKTMLRLAETRDALNVVEDQWG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 P+SAL IA AI+ + + ++ TS G++H G +WADFA IF ESA+RGGP Sbjct: 180 CPSSALDIATAILTVVGHWQQDGATS--GLYHFAG-TGETNWADFASTIFAESAKRGGPS 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I + YPT A RPA S LDC++ A T R W++ + +L + Sbjct: 237 ATVTGIPSSGYPTPATRPANSRLDCTRFAETFGYRAPAWQDSLNVVLDRL 286 >gi|319427034|gb|ADV55108.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens 200] Length = 291 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 120/290 (41%), Positives = 172/290 (59%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ +SL Q D+E + + R +D+ + F P+VIIN A Sbjct: 1 MKILITGSNGQVGRSLVKQLNQMPDIEFLAMDREQLDITDCEAVNKLVNEFKPNVIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++++IN +G +AKAA+S+G ++ISTDYVF G + E Sbjct: 61 AHTAVDKAEQEVELSYAINRDGPQFLAKAANSVGATILHISTDYVFAGDKQGEYSEDDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG+SKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRLA+ R E VV DQ Sbjct: 121 APQSVYGQSKLAGELAVAAANPRHIILRTAWVFCETGNNFVKTMLRLAQSRDEFGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 FG PT A IA A+I +A L ++ + G++H V+W FA IF ++ +G Sbjct: 181 FGGPTYAGDIAYALIAMAKVL--HAGNNNYGVYHFAG-LPHVNWHQFAVDIFKQANAQGI 237 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T QYPT A RPA S L+C K+ + I S W+ + N+ Sbjct: 238 LHKELRVNAITTAQYPTTAKRPANSKLNCYKIGQSFGINPSDWQAALNNL 287 >gi|189460858|ref|ZP_03009643.1| hypothetical protein BACCOP_01505 [Bacteroides coprocola DSM 17136] gi|189432432|gb|EDV01417.1| hypothetical protein BACCOP_01505 [Bacteroides coprocola DSM 17136] Length = 286 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L+ G NGQ+ + + ++ ++D+ + +F D+I+N Sbjct: 1 MKNILITGANGQLGNEMRLLAEVNKEYTYFFTDVAELDICDEQAVMNFVTDHQIDIIVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ +N G +AKA S G + +STDYVFDG + P E Sbjct: 61 AAYTAVDKAEDDRELCDKLNHFAPGYLAKAIQSRGGYLVQVSTDYVFDGTAHIPYKEEQA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P ++YG +KLAGE++ Y +N +I+RTAW+YS FG+NF+ +M+RL KE+ + V+ D Sbjct: 121 TCPDSVYGTTKLAGEQEAMKYCSNTMIIRTAWLYSTFGNNFVKTMIRLGKEKEALGVIFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI + I + GI+H + + G SW DF + I + G Sbjct: 181 QIGTPTYARDLAVAIFAAINKGI------VPGIYHYSNE-GVCSWYDFTQMIHHLA---G 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ + T++YPTKA+RP YS LD +K+ T+ I I W + ++ + + Sbjct: 231 IGTCKLRPLHTEEYPTKANRPHYSVLDKTKIKETYGIEIPYWVDSLKECIDKL 283 >gi|120598287|ref|YP_962861.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. W3-18-1] gi|120558380|gb|ABM24307.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. W3-18-1] Length = 308 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 116/290 (40%), Positives = 166/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ SL Q ++E + V R +D+ + P+ IIN A Sbjct: 18 MKILITGSNGQVGSSLVKQLNQMPEIEFLAVDRQQLDITDCEAVNKLVNELKPNAIINAA 77 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA+S+G ++ISTDYVF G E Sbjct: 78 AHTAVDRAEQEVELSYAINRDGPQFLAQAANSVGATILHISTDYVFAGDKDGEYIETDTV 137 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRLA R E+ VV DQ Sbjct: 138 APQGVYGQSKLAGELAVTAACPRHIILRTAWVFYGTGNNFVKTMLRLAHNRDELGVVADQ 197 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 FG PT A IA A+I +A L + + G++H VSW FA IF ++ E+ Sbjct: 198 FGGPTYAGDIANALIVMAKAL--QAGNTHYGVYHFAGK-PHVSWHQFAREIFKKANEQNI 254 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV I ++QY T A RPA S LDC K+ + I+ S W+ + N+ Sbjct: 255 LNKQMKVNAITSEQYLTPAKRPANSKLDCLKIEQSFGIKPSNWQAALNNL 304 >gi|315499261|ref|YP_004088065.1| dtdp-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48] gi|315417273|gb|ADU13914.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis excentricus CB 48] Length = 299 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 139/291 (47%), Positives = 190/291 (65%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G GQ+ SL S+ +E+IRVG P+IDL KP+ A + PDVII+ AA Sbjct: 1 MRIVVTGKEGQVDTSLQSLGEALGLEVIRVGLPEIDLSKPETLAEPIKAARPDVIISSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+A +IN +G GA+AK A + IP +++STDYVF G E Sbjct: 61 YTAVDKAESETELAQAINGDGPGALAKIAAELDIPLLHLSTDYVFAGDKDGIYTESDAPG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG +KL+GE ++A+ T N+VILRTAWVYS +G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVSVYGMTKLSGETQIAAATANHVILRTAWVYSPYGNNFVKTMLRLGETRDELNVVADQK 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +IARA++ IA + ++ D LRGIFH+T G +WA FAE IF SA RGG Sbjct: 181 GCPTYAPEIARALLHIAQRVSKDPDPKLRGIFHLTGQ-GETTWAGFAEVIFEGSALRGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T+ YPT A RPA S L KLA +++R+ W+ + + L + Sbjct: 240 AVKVTPIPTEAYPTPAKRPANSRLSGEKLAEVYDLRLDPWRVSLDDCLTRL 290 >gi|72132991|gb|AAZ66344.1| RmlD [Listonella anguillarum] Length = 294 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 172/291 (59%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G++GQ+ L+ DVE + V R +D+ P S F P++IIN A Sbjct: 1 MRVLVTGSHGQVGYCLAHQLNSMVDVEFLAVDREQLDITNPCHVNSVVNEFKPNIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G + E T Sbjct: 61 AHTAVDRAEQEAELSYAINRDGPKHLAQAAHKVGAAILHISTDYVFSGDKPSAYIEADST 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YGKSKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 121 SPQGVYGKSKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAQTRDALGVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 +G PT A IA A++ +A ++E T+ G++H + VSW DFA IF ++ E+G Sbjct: 181 YGGPTYAGDIANALLIMAKAIVEGKSTA-FGVYHFSG-TPHVSWYDFACAIFDKAREQGL 238 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I TK YPT A RPA S L+ K+ + S W+ + +++ Sbjct: 239 LNKPLQVNAITTKDYPTPAKRPANSKLETQKIHQHFGVVASDWRAALNHLI 289 >gi|325836668|ref|ZP_08166211.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1] gi|325491193|gb|EGC93481.1| dTDP-4-dehydrorhamnose reductase [Turicibacter sp. HGF1] Length = 284 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+NG + L + D E+I + + D D+ ++PDV+I+PAA Sbjct: 1 MKILITGSNGMLGTDLCEVFKNNDFEVIPMTQNDFDITNLNQTIEKIKEYNPDVVIHPAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD E+ ++A+ IN+ GA +A A I +YISTDYVFDG S TP EF + Sbjct: 61 YTNVDACEENIDLAYQINSIGARNVALACKEIDAAMVYISTDYVFDGTSSTPYKEFDVAS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +IYGKSKLAGE V + Y I+RTAW+Y G NF+ +M+ LA + ++ VV DQ Sbjct: 121 PQSIYGKSKLAGENYVRDILSKYYIVRTAWLYGKNGKNFVTTMIDLASKMPQLKVVNDQN 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT ++ AI Q+ G++H++ + P +W F + IF + G Sbjct: 181 GCPTYTKDLSEAIAQLIKK-------PAYGVYHLS-NSEPTTWYGFTQEIFTQC----GI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V T ++P A RPAYS LD + + W+E + + L I Sbjct: 229 GTPVVPCTTDEFPRPAKRPAYSVLDNCSWRLEGFMPLRPWQEALTDYLKEI 279 >gi|126175091|ref|YP_001051240.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125998296|gb|ABN62371.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 291 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 167/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ L Q ++E V R +D+ A F P IIN A Sbjct: 1 MKILVTGSNGQVGSCLVKQLSQMPEIEFWAVDRTQLDITDAAAVAKLVNDFKPHAIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAEDE ++++IN +G +A+AA+S G ++ISTDYVF G + E Sbjct: 61 AHTAVDKAEDEVALSYAINRDGPQWLAEAANSAGAVMLHISTDYVFAGDKQGEYRETDAI 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YGKSKLAGE VA+ ++ILRTAWV+ G+NF+ +MLRL++ R E+ VV DQ Sbjct: 121 DPQGVYGKSKLAGELAVAAACPRHIILRTAWVFCETGNNFVKTMLRLSQSRDELGVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+I +A + + + GI+H + V+W FA IF ++ +G Sbjct: 181 FGGPTYAGDIANALITMAKAISNGNQS--FGIYHYSG-LPHVNWHLFACEIFKQAKSQGL 237 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + V I ++QYPT A RP S LDC+K+ I+ S W+ + + Sbjct: 238 LDKEMNVKAITSEQYPTPAKRPKNSKLDCNKILQHFGIQASDWRAALNKL 287 >gi|265752204|ref|ZP_06087997.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_33FAA] gi|263236996|gb|EEZ22466.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_33FAA] Length = 285 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 113/293 (38%), Positives = 161/293 (54%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + + + ++D+ + +F + VI+N Sbjct: 1 MKNILVTGANGQLGNEMRVLSAEYKEYTCFFTDVAELDICDEQAVMTFVKENNIHVIVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ E+ +N +AKAA++ I ISTDYVFDG P DE Sbjct: 61 AAYTAVDKAEDDIELCTKLNKNAVSYLAKAAEANWGEFIQISTDYVFDGTKYLPYDEGDV 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P ++YGK+KLAGE Y +I+RTAW+YS FG+NF+ +M+RL KER + VV D Sbjct: 121 PCPNSVYGKTKLAGETNALEYCKKTMIIRTAWLYSTFGNNFVKTMIRLGKEREALGVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +ARAI+ H + + G++H + D G SW DF + I + G Sbjct: 181 QIGTPTYARDLARAILVAIHKGV------VPGVYHFS-DEGVCSWYDFTKAIHRIA---G 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +YP KA RP YS LD +K+ T++I I W+E + + + Sbjct: 231 ITTCKVTPLHTNEYPAKAPRPHYSVLDKTKIKTTYDIGIPHWEESLEACIKEL 283 >gi|154493894|ref|ZP_02033214.1| hypothetical protein PARMER_03238 [Parabacteroides merdae ATCC 43184] gi|154086154|gb|EDN85199.1| hypothetical protein PARMER_03238 [Parabacteroides merdae ATCC 43184] Length = 288 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 160/293 (54%), Gaps = 10/293 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + + +D+ + +F D IIN Sbjct: 1 MKTILVTGANGQLGNSIRRLAAGYPQYAFVFTDVDTLDICDAQAVNAFVKEKQVDYIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ + IN + + +AA G I++STDYVFDG + P E Sbjct: 61 AAYTAVDKAEDDEALCLRINRDAVRNLGEAARMAGARVIHVSTDYVFDGTNHLPYVETDN 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P ++YG++KLAGE+ + + VI+RTAW+YS FG+NF+ +MLRL ER ++SVV D Sbjct: 121 TCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLYSEFGNNFVKTMLRLGNEREQLSVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A +A AI + +D + GI+H + + G SW DFA I E G Sbjct: 181 QIGSPTYAGDLAAAIFAVLVQ--AEADAFVPGIYHYSNE-GVCSWYDFAVKIM----ELG 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I +K YP KA RP +S L+ +K+ + I IS W+ +R + I Sbjct: 234 NAPCRVLPIESKDYPAKAARPHFSVLNKAKIKTIYKISISHWEASLRECMKRI 286 >gi|218258015|ref|ZP_03474457.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii DSM 18315] gi|218225814|gb|EEC98464.1| hypothetical protein PRABACTJOHN_00110 [Parabacteroides johnsonii DSM 18315] Length = 288 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 158/293 (53%), Gaps = 10/293 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + + +D+ + +F D IIN Sbjct: 1 MKTILVTGANGQLGNSIRQLAAGYPQYAFVFTDVDTLDICDAQAVDAFVKEKQADYIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+ + F IN + + +AA G I++STDYVFDG + P E Sbjct: 61 AAYTAVDKAEDDEALCFRINRDAVRNLGEAARMAGARVIHVSTDYVFDGTNHLPYVETDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P ++YG++KLAGE+ + + VI+RTAW+YS FG+NF+ +MLRL ER ++SVV D Sbjct: 121 TCPASVYGRTKLAGEQALQEVCPDAVIIRTAWLYSEFGNNFVKTMLRLGNEREQLSVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A +A I+ + + + GI+H + + G SW DFA I E G Sbjct: 181 QIGSPTYAGDLAATILAVLVQ--AEAGAFVPGIYHYSNE-GVCSWYDFAVKIM----ELG 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I +K YP KA RP +S L+ +K+ + I I W+ +R + I Sbjct: 234 DAPCHVLPIESKDYPAKAARPHFSVLNKTKIKTIYTISIPHWEASLRECMKRI 286 >gi|325662381|ref|ZP_08150990.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium 4_1_37FAA] gi|325471383|gb|EGC74606.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae bacterium 4_1_37FAA] Length = 280 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + V ++D+ + +I+ AA Sbjct: 1 MKVLVTGTKGQLGYDVVNELEKRGHTAVAVDIEEMDITDAVSVERVITEAEVEAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NAEG IAK + + IYISTDYVFDG P + + Sbjct: 61 YTAVDAAEDNVEICRRVNAEGTENIAKVCKKLDLKMIYISTDYVFDGEGERPWEPDDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V Y Y I+R AWV+ + G NF+ +ML+L++ E++VV DQ Sbjct: 121 PLNVYGQTKYEGELAVEKYLEKYFIVRIAWVFGVNGKNFIKTMLKLSETHEELNVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++ + ++ G +H T + G +W +FA+ IF ++ G Sbjct: 181 GSPTYTYDLAVLLVDMV-------ESDKYGRYHATNE-GLCTWYEFAKEIFRQA----GV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +P KA RP S + KL R+ TW++ + L I Sbjct: 229 EVKVNPVTSDMFPAKAKRPKNSRMSKEKLDANVFHRLPTWQDALERYLSEI 279 >gi|292492258|ref|YP_003527697.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4] gi|291580853|gb|ADE15310.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus halophilus Nc4] Length = 296 Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 171/291 (58%), Gaps = 4/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L E+I + R +DL + ++ S P +I+N AAYT Sbjct: 7 RILLLGASGQVGWELQRTLAPLGEVIALRRDRLDLAQVENIGSCLADIQPILIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE+EPE A +IN + G +A+AA G I+ STDYVFDG + +P E PL Sbjct: 67 AVDQAEEEPERAMAINGDVPGILAEAARQQGAALIHYSTDYVFDGENTSPYRETDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAGE+ +A+ Y+ILRT+WVY + G NFLL+M RLA+ER + VV DQ+GT Sbjct: 127 NVYGQTKLAGEKAIAAVGGAYLILRTSWVYGLRGRNFLLTMQRLAQEREALKVVDDQWGT 186 Query: 182 PTSALQIARAIIQIAHN---LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + IA QI +++ G +H++ GG +W FA I A+R Sbjct: 187 PTWSRLIAEGTAQIIAQSRGQMQDYIRQQAGTYHLSC-GGKTTWYGFARVILDRLAQRTT 245 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P +++ I T YPT A RPA+S LD S + +T I++ WKE + L + Sbjct: 246 PVARLEAIPTSGYPTPAQRPAFSSLDNSHVRDTFGIQLPHWKEALGLALSD 296 >gi|110635097|ref|YP_675305.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium sp. BNC1] gi|110286081|gb|ABG64140.1| dTDP-4-dehydrorhamnose reductase [Chelativorans sp. BNC1] Length = 295 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 136/289 (47%), Positives = 175/289 (60%), Gaps = 3/289 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII--RVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G NGQ+A+SL + + RP++DL P+ A +PD+++N A Sbjct: 1 MKILVTGKNGQLARSLLDRAARHPHLALDFAARPELDLADPRTIAPAIARHAPDLVVNAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEPE+A ++N AG IA+A + GIP I+ISTDYVFDG P E P Sbjct: 61 AYTAVDQAEDEPELAHAVNGAAAGLIARATAARGIPLIHISTDYVFDGALARPYREEDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL++YG SKLAGE V +++ILRTAWVYS +G NFL +ML+LA+ R EI VVCDQ Sbjct: 121 NPLSVYGASKLAGERAVREQNPDHLILRTAWVYSPYGRNFLKTMLKLAEARDEIRVVCDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSA IA I+ A +H+ G SW +FA +IF ESA RGG Sbjct: 181 IGNPTSAHDIAGGILAAAEARRVQGTRGWGKTYHLAG-SGEASWHEFAAHIFEESARRGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P ++V I T+ YPTKA RP S L C + A+ R W+E V +L Sbjct: 240 PSARVTPIATEDYPTKAVRPRNSRLCCDRFADAFGYRAPAWREAVVELL 288 >gi|160881797|ref|YP_001560765.1| dTDP-4-dehydrorhamnose reductase [Clostridium phytofermentans ISDg] gi|160430463|gb|ABX44026.1| dTDP-4-dehydrorhamnose reductase [Clostridium phytofermentans ISDg] Length = 285 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 150/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G NGQ+ + + + R D+D+ +P+ +IN AA Sbjct: 1 MRVVVTGVNGQLGYDVVKELEKHGLTAFGLTRKDLDITDKDQVIRTIRDINPEAVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE+E E S NA A +A A I IY+STDYVF G P + Sbjct: 61 YTAVDLAEEEKEETLSANALAASYLAIACAGIHAKMIYLSTDYVFSGEGEKPYEVCDQVA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++K GE+ V ++ I+R +WV+ G NF+ +MLRL++ER +SVV DQ Sbjct: 121 PINWYGQTKYEGEQAVIRELDSCFIVRVSWVFGKNGKNFVKTMLRLSEERNTVSVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +A+ ++ + T GI+H+T + G SW DFA+ IF S G Sbjct: 181 GSPTYTVDLAKCLVAMIK-------TDKYGIYHVTNE-GFCSWYDFAKEIFRMS----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + ++PTKA RP S L KL R+ TW++ + L + Sbjct: 229 NTTVQPLTSDEFPTKAKRPKNSRLSKEKLTEQGFERLPTWQDALSRYLYEL 279 >gi|192359580|ref|YP_001983890.1| dTDP-4-dehydrorhamnose reductase [Cellvibrio japonicus Ueda107] gi|190685745|gb|ACE83423.1| dTDP-4-dehydrorhamnose reductase [Cellvibrio japonicus Ueda107] Length = 293 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 153/290 (52%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ L + + + V R +D+ + P+++IN AA Sbjct: 1 MKILVTGANGQVGHCLHQQLINNSMSFKAVTRKQLDITDVSAVERSLKEYQPNIVINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + E AF IN +G +A + +IG +ISTDYVF G + P E T+ Sbjct: 61 YTAVDKAESDQENAFRINRDGVANLASVSSAIGAAIFHISTDYVFAGNNDHPYREDDDTS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKLAGE V ++ILRTAWV+ G+NF+ +M+RL + R + +V DQ Sbjct: 121 PQGIYGQSKLAGEIAVIQTNPKHIILRTAWVFGEHGNNFVKTMIRLGRTRDSLGIVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A+I+IAH I+ D G +H +W +FA IF + Sbjct: 181 GGPTHAGDIATALIRIAHQYIKTGDLPW-GTYHYAG-MPHTNWYEFARAIFKQVEAENLY 238 Query: 240 Y---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T YPT A RPA S LDC+K+ I S W+ + NI Sbjct: 239 DKATPSLNAIATADYPTPAKRPANSRLDCTKIQTNFGIAPSDWQAALNNI 288 >gi|209518633|ref|ZP_03267451.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] gi|209500916|gb|EEA00954.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] Length = 308 Score = 335 bits (861), Expect = 3e-90, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 154/292 (52%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L+ ++ V R +DL + + P +I+NPAAYTA Sbjct: 10 ILVTGVNGQVGYELARTLQGLGNVVAVDRSRLDLSNFEQIRAVVRDLRPALIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E ++A IN E G +A+ A +G I+ STDYVF+G E PT+P N Sbjct: 70 VDKAEEERDLAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFNGTKEGAYVEDDPTDPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQFG P Sbjct: 130 VYGRSKLAGEQAIAATGVNHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQFGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T IA + D + GI+H+ A G SW FA IF + Sbjct: 190 TWCNTIATLTAHLCAQSFAAEDGAKWWSERTGIYHLCA-GDSTSWHGFASAIFELADLPN 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I YPT A RPA S + KLA + W++ ++ L + Sbjct: 249 KPNT--LPIPAADYPTPATRPANSRMSNEKLARVFGLAAPHWRDALKLCLTD 298 >gi|150004941|ref|YP_001299685.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] gi|149933365|gb|ABR40063.1| dTDP-4-dehydrorhamnose reductase [Bacteroides vulgatus ATCC 8482] Length = 286 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVRNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + + +N+IE + +G++H + + G SW DFA+ I S G Sbjct: 181 GTPTYAGD----LAALIYNIIEENLLDRQGVYHFSNE-GVCSWYDFAKEICELS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVGRPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|323486294|ref|ZP_08091620.1| hypothetical protein HMPREF9474_03371 [Clostridium symbiosum WAL-14163] gi|323693916|ref|ZP_08108103.1| dTDP-4-dehydrorhamnose reductase [Clostridium symbiosum WAL-14673] gi|323400404|gb|EGA92776.1| hypothetical protein HMPREF9474_03371 [Clostridium symbiosum WAL-14163] gi|323502013|gb|EGB17888.1| dTDP-4-dehydrorhamnose reductase [Clostridium symbiosum WAL-14673] Length = 286 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 16/295 (5%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + +E I V ++D+ PD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDVMNELAKRGIEGIGVDVEEMDITDKDACRRVITEAGPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE E+ +NA+G IA+ + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEQNMELCRKVNADGTRNIAEVCRDLDISLMYISTDYVFNGTGERPWEPDDVRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++K GE + + Y I+R AWV+ + G NF+ +MLRL +E +SVV DQ Sbjct: 121 PLNAYGQAKYEGELAIEELLDKYFIVRIAWVFGVNGKNFIKTMLRLGREHGAVSVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFAVEIFKKA---GME 229 Query: 240 YSKVYRIFTKQ----YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T++ YP +A RP S + KL R+ +W++ + L I Sbjct: 230 DVKVTPVDTEEYTSRYPGQAKRPMNSRISKDKLEENGFERLPSWQDALERYLKEI 284 >gi|304407807|ref|ZP_07389458.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] gi|304343290|gb|EFM09133.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] Length = 290 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 163/291 (56%), Gaps = 15/291 (5%) Query: 2 KCLVIGNNGQIAQSLS---SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ + ++ + + ++I GR ++D+ + +F+P +I+ A Sbjct: 9 RVLVTGANGQLGREIALWATAEAEGLDIRGYGRDELDITDLSQCRAVITAFAPHAVIHCA 68 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE +P+ AF +NA G IA AA G Y+STDYVFDG S P +E+ Sbjct: 69 AYTAVDQAEADPDSAFVVNATGTRNIALAAREAGAKLAYVSTDYVFDGSSAVPYNEYDRP 128 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YGKSKLAGEE V + + + ++RT+WVY +G+NF+ +M+++ ER + VV DQ Sbjct: 129 NPRTVYGKSKLAGEELVRTLHDRHFVVRTSWVYGAYGANFVKTMIKVGAERGAVKVVHDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A ++++ T G++H ++ G SW +FA IF ES G Sbjct: 189 IGSPTCTFDLAAMLLELVR-------TDAYGVYH-ASNSGTCSWYEFAVAIFEES----G 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 T+++P A RPA+S LD S + I W+E +R+ L Sbjct: 237 MQVSTEPCTTEEFPRPAPRPAFSVLDHSAIRTNGLTPIRHWREALRDYLAK 287 >gi|187922883|ref|YP_001894525.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187714077|gb|ACD15301.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 298 Score = 335 bits (860), Expect = 4e-90, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 152/291 (52%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L+ ++ V +DL P + + P +I+NPAAYTA Sbjct: 10 ILVTGVNGQVGFELARTLQGLGTMVAVDHAAMDLSDPDQVRAVVRNIRPTLIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E ++A IN E G +A+ A +G ++ STDYVF+G E PT+P N Sbjct: 70 VDKAEEELDLAMRINGEVPGVLAEEAKKLGAALVHYSTDYVFNGEKDGAYVEDDPTDPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++KLAGE+ +A+ +++I RT+WVY G NFLL+MLRL ER E+SVV DQ G P Sbjct: 130 AYGRTKLAGEQAIAASGCDHLIFRTSWVYGTRGKNFLLTMLRLGAERDELSVVADQIGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA + G++H+TA G SW FAE IF S Sbjct: 190 TWSKTIATLTANVLAQAAAPGQGDWWQQRSGVYHLTA-AGSASWHGFAEAIFELSGL--A 246 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I YPT A RP S + KLA T ++ W++ ++ L Sbjct: 247 KTPTVKPIPAASYPTPAKRPGNSRMSNDKLARTFGVQAPDWRDALQLCLGE 297 >gi|320352682|ref|YP_004194021.1| dTDP-4-dehydrorhamnose reductase [Desulfobulbus propionicus DSM 2032] gi|320121184|gb|ADW16730.1| dTDP-4-dehydrorhamnose reductase [Desulfobulbus propionicus DSM 2032] Length = 295 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 157/295 (53%), Gaps = 6/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ L + V + D DL + S S PD+I++PAAY Sbjct: 1 MRILLTGKNGQVGFELQRALAPLGTLTAVDQTDCDLTDQQAIRSLVRSIQPDIIVHPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++A +IN G + + A IG ++ TDYV DG + E P NP Sbjct: 61 TAVDRAEAESDLAMAINGTAPGILGEEAARIGALVVHYCTDYVHDGTKQGFHTENDPPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKLAG + + TN ++I RT WV+ G+NF+ +ML+LA ER ++VV DQFG Sbjct: 121 RNVYGASKLAGTKSLCQKTNKHLIFRTCWVFGAHGANFVKTMLKLAGERETLNVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q+ + G++H+ A G +W +FA+ + S G Sbjct: 181 APTSASLIADITAQVIGQYQRTEEKHFPFGLYHLAA-AGVTTWHEFAQTVVAASLRAGMG 239 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T QYP A RPA S L KL +T ++ + W++G+ ++L I Sbjct: 240 LKLTPQSIRPITTAQYPLPARRPANSRLATDKLRDTFSLHLPPWQDGLSHVLQQI 294 >gi|212694336|ref|ZP_03302464.1| hypothetical protein BACDOR_03862 [Bacteroides dorei DSM 17855] gi|212662837|gb|EEB23411.1| hypothetical protein BACDOR_03862 [Bacteroides dorei DSM 17855] Length = 287 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + ++D+ + DVI+N AA Sbjct: 2 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAA 61 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 62 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFQGDKNIPCRESWETD 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 122 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + + +N+IE + +G++H + + G SW DFA+ I S G Sbjct: 182 GTPTYAGD----LAALIYNIIEENLLDRQGVYHFSNE-GVCSWYDFAKEICELS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 233 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 283 >gi|329897710|ref|ZP_08272188.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] gi|328921057|gb|EGG28469.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] Length = 301 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 124/291 (42%), Positives = 164/291 (56%), Gaps = 5/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G+NGQ+ + + I R +D+ + A P V+IN AAY Sbjct: 9 KILVTGSNGQVGHDFKCLAENSRHDWICFDRKGLDISDEQQVADVIARERPHVVINCAAY 68 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+ AF+INA GA +AKA + G I+ISTDYVF G + P +E PT P Sbjct: 69 TAVDKAESEPDRAFAINAYGAANLAKACQAHGAALIHISTDYVFAGDTLAPYEESDPTGP 128 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYG+SKLAGE+ +A Y ++ILRTAWV+ G+NF+ +MLRL ER E+ VV DQ+G Sbjct: 129 TGIYGESKLAGEQAIAEYLERHIILRTAWVFGAHGNNFVKTMLRLGAERDELGVVADQWG 188 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTSA IA + IA + GI+H T SW FAE IF ++ G Sbjct: 189 APTSAAGIAACCLAIAEIIDAKDCAEIPWGIYHFTG-LPSTSWHGFAEKIFKDAVAIGLL 247 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV I + Q+PT A RP+ S LDCSK+ N I W++ + ++L Sbjct: 248 DKAPKVNAISSDQFPTPAKRPSNSQLDCSKIFNCFQITPDNWEDRLLDVLK 298 >gi|302880021|ref|YP_003848585.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] gi|302582810|gb|ADL56821.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] Length = 295 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 108/294 (36%), Positives = 154/294 (52%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G NGQ+ L E++ +G + + F+PDVI+N AA+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAPLGEVLALGSDRCNFTDMDGLTNTVRQFAPDVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A +INA G +A A +G I+ STDYVFDG P E PT P Sbjct: 61 TAVDRAESEPELARTINALAPGVLAAEAKRLGAWLIHYSTDYVFDGSGNKPWMETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKL GE +A + I RT+WVY G NF +MLRLA+ER + V+ DQ G Sbjct: 121 LSVYGASKLEGERLIAESGCRHFIFRTSWVYGARGGNFAKTMLRLAQERDSMKVIDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PT A +A + N D + G++H+ A GG SW +A ++ + + G P Sbjct: 181 APTGAELLADVSAHAIRTSLVNPDVA--GLYHLVA-GGETSWHGYANFVIDFARQAGVPI 237 Query: 240 ---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +PT A RP S L KL + + + W+ GV +L + Sbjct: 238 KVMPDAIEAVPTSAFPTAATRPHNSRLSTGKLTSAFGLHLPHWQVGVTRMLTEV 291 >gi|304383909|ref|ZP_07366366.1| dTDP-4-dehydrorhamnose reductase [Prevotella marshii DSM 16973] gi|304334987|gb|EFM01260.1| dTDP-4-dehydrorhamnose reductase [Prevotella marshii DSM 16973] Length = 284 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 155/292 (53%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + L + ++ +I ++D+ P ++ D I+N A Sbjct: 1 MNVLITGCNGQLGRELRLLQKENDDIRWTNADIEELDITDPTAIEAYVDKHRIDSIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE++ E +NA +A+A G I ISTDYVFDG + P E Sbjct: 61 AYTAVDKAEEDAERCRILNALAPEYLARAMAKHGGRLIQISTDYVFDGTAHQPYTETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG++KL+GE + + +++RTAW+YS FG+NF+ +MLRL +ER + VV DQ Sbjct: 121 RPTGVYGQTKLSGERAAIAACPDTIVIRTAWLYSPFGNNFVKTMLRLGRERENLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ + GI+H T + G SW DFA I + Sbjct: 181 IGTPTYAHDLAIAIVAALRKPLPA------GIYHFTNE-GATSWYDFAVAIHRIARIH-- 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V+ + T +YPT A RP YS LD +K+ T I I W++ + + + + Sbjct: 232 -TCTVHPLHTAEYPTPAQRPFYSLLDKTKIKRTLGIEIRHWEDALNHCIDRL 282 >gi|332663274|ref|YP_004446062.1| dTDP-4-dehydrorhamnose reductase [Haliscomenobacter hydrossis DSM 1100] gi|332332088|gb|AEE49189.1| dTDP-4-dehydrorhamnose reductase [Haliscomenobacter hydrossis DSM 1100] Length = 285 Score = 335 bits (859), Expect = 5e-90, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 154/289 (53%), Gaps = 10/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQI + L ++ + ++ I + R +D+ + D IN A Sbjct: 1 MTILITGANGQIGRELQALQAEFPGLQYIALDRSTLDMTNASAIQRVIAETTFDACINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VDKAE E E+AF+INA G +A+A G+ I+ S+DYV+ P+ E + Sbjct: 61 AYTTVDKAEQETELAFAINAHAPGILAEACWEKGVQLIHYSSDYVYHNGINRPLLETDSS 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IY SKL G+++V + ++ RT+WVYS FG NF+ +MLRL +E+ + VV DQ Sbjct: 121 MPRSIYAHSKLEGDKRVLAAHPGALVFRTSWVYSSFGHNFVKTMLRLGQEKEVLRVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A IAR +QI L+ GIF+ + + G SW DFA IF S G Sbjct: 181 IGTPTYARDIARMSLQI---LLSEQSGEQAGIFNYSNE-GVCSWYDFARAIFDLS----G 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + YPT A RP YS LD SK + I W++ + L Sbjct: 233 IPCRVEPIPSTAYPTPAARPPYSVLDKSKFKAAFGLEIPYWRDSLVECL 281 >gi|237727665|ref|ZP_04558146.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D4] gi|229434521|gb|EEO44598.1| dTDP-4-dehydrorhamnose reductase [Bacteroides dorei 5_1_36/D4] Length = 286 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + ++D+ + DVI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSLDSRNRYLFTDVNELDITDATAVCNMLKKEQIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AED+ +A +N + +A AA G I++STDYVF G P E T+ Sbjct: 61 YTNVDRAEDDFAMADLLNNKAVENLAVAAAETGATLIHVSTDYVFRGDKNIPCRESWETD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE+ + Y+I RTAW+YS FG NF+ +M +L + + VV DQ Sbjct: 121 PLGVYGKTKLAGEQSLVKAGCKYLIFRTAWLYSPFGKNFVKTMRQLTSTKDSLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + + +N+IE + +G++H + + G SW DFA+ I S G Sbjct: 181 GTPTYAGD----LAALIYNIIEENLLDRQGVYHFSNE-GVCSWYDFAKEICELS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I I WK+ ++ ++ + Sbjct: 232 NCDIQPCHSDEFPSKVERPHFSVLDKTKVKETFGITIPYWKDSLKKCMLEL 282 >gi|326391870|ref|ZP_08213382.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW 200] gi|325992088|gb|EGD50568.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter ethanolicus JW 200] Length = 298 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 104/303 (34%), Positives = 154/303 (50%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-------------VGRPDIDLLKPKDFASFFL 47 M+ L+ G GQ+A L S+ + I ++D+ K F Sbjct: 1 MRLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFVD 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PDVIIN AAYT VDK E + + AF +NA G +A AA IG +++STDYVF+G Sbjct: 61 EYRPDVIINCAAYTNVDKCESDIDTAFKVNAIGPRNLAIAAQKIGARLLHVSTDYVFNGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L+ AK Sbjct: 121 GDIPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAHHILKLVL-------TEEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V I + + A RP YS LD L T + W++ ++ + Sbjct: 233 KIVEYA----GINCTVVPITSDKIDRPAKRPFYSSLDNMMLRCTIGDEMRNWEDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 EDL 291 >gi|241668048|ref|ZP_04755626.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876583|ref|ZP_05249293.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842604|gb|EET21018.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 301 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 160/301 (53%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV------QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV G+NGQ+ L + Q+ I + +D+ + F + + I Sbjct: 1 MKVLVTGSNGQLGSELKELVSNSKLEIQNYTFIFMDSKSLDITDHQAVERFVVEHDIEAI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVDKAE + E+A IN IA+ A I I+ISTDYVF+G S P E Sbjct: 61 INCAAYTAVDKAESDIEMADKINHLAVATIAELAKKCSIKLIHISTDYVFNGESFRPYIE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 TNP +IYG +KLAGEE + +I+RT+WVYS +G+NF+ +MLRL +E+ + Sbjct: 121 SDKTNPQSIYGATKLAGEEVIQRINPKDSIIIRTSWVYSSYGNNFVKTMLRLGREKDTLG 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHN----LIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 V+ DQ GTPT A +A+AI+ I + +D + I++ + + G SW DFA+ I Sbjct: 181 VIYDQVGTPTYAKDLAKAILDILSQVDSRVKHENDNEVVEIYNYSNE-GVTSWYDFAKEI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + +V I T YPT A RP YS L+ K+ + I WK +++ + Sbjct: 240 MSIAK----IECQVNPIETVDYPTPAKRPHYSLLNKKKIKQDFGLSIPYWKNSLQDCIYR 295 Query: 290 I 290 I Sbjct: 296 I 296 >gi|110349046|gb|ABG73090.1| RfbD [Rhizobium leguminosarum bv. trifolii TA1] Length = 295 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 151/291 (51%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQI QSL + DVEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQIVQSLLRRGAEMDVEISAVGRPEMDLADPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAGA + +IG P I+IST+YVF G E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGAGCRGFCAIGAPVIHISTEYVFSGDRAFAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGEE VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEEAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIATRVVADPEPSLRGTFHLTG-SGEASWADFAEEIFAELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 TVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMAIVMQDL 290 >gi|167770811|ref|ZP_02442864.1| hypothetical protein ANACOL_02162 [Anaerotruncus colihominis DSM 17241] gi|167666851|gb|EDS10981.1| hypothetical protein ANACOL_02162 [Anaerotruncus colihominis DSM 17241] Length = 283 Score = 335 bits (859), Expect = 6e-90, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 156/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G +GQ+ + + +E V D+D+ K + + PD +I+ AA Sbjct: 1 MRVFVTGASGQLGYDVCKELTRRGIENRGVSVEDLDITDRKAVEAALENNRPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDE E +++N +G +A + +IG +YISTDYVF GL + + N Sbjct: 61 YTAVDKAEDEAEQCWAVNVDGTRNLAVSCKAIGAKMLYISTDYVFPGLGKQFYEVTDAVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGE V S +Y I+R +WV+ G+NF+ +MLRL+K E++VVCDQ Sbjct: 121 PTNVYGASKLAGELVVQSLLTDYFIVRISWVFGANGNNFIKTMLRLSKSNTELNVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + T G++H T + G SWA+FAE IF + G Sbjct: 181 GSPTYTADLAPLLCDMIR-------TDQFGLYHATNE-GVCSWAEFAEEIFRCA----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT A RP S L L+ + W +R L+ I Sbjct: 229 EVKVNHILTEEYPTCAKRPLNSRLSKRMLSAQGFRPLPEWTNALRRYLIEI 279 >gi|241204006|ref|YP_002975102.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857896|gb|ACS55563.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 295 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEI VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAEMGVEISAVGRPEMDLADPVSIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+AFS+NA GAGA+A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEPELAFSVNAAGAGAVAEAAARIGAPVIHISTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NF+ +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFVKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIASRIVADPAPSLRGTFHLTG-SGEASWADFAEEIFTELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTFVMQDL 290 >gi|298377135|ref|ZP_06987089.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|298266119|gb|EFI07778.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] Length = 287 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 161/292 (55%), Gaps = 10/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + Q + +D+ + + L ++N Sbjct: 1 MKTVLVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E Sbjct: 61 AAYTAVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P+++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + D Sbjct: 121 TCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A A++ + + + GI+H + D G SW DF I + Sbjct: 181 QVGTPTYAGDLAVAMLTVLER--AEAGKFIPGIYHFS-DEGVCSWYDFTVKILQIA---- 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V I TK YPT A RP YS L+ K+ +T+ + I W+ + + N Sbjct: 234 GMNNRVIPIETKDYPTPASRPHYSVLNKGKIKSTYGLTIPHWETSLAYCMNN 285 >gi|256420554|ref|YP_003121207.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] gi|256035462|gb|ACU59006.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] Length = 287 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 98/293 (33%), Positives = 151/293 (51%), Gaps = 9/293 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L+ G NGQ+ Q++ + + ++D+ + +FF +N Sbjct: 1 MKNILITGANGQLGQAIKKVTADYPGFNFVYTDFNELDITSEEAVRNFFSQQEIHACVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + E AF +N E +A ++ISTDYVF+G P E Sbjct: 61 AAYTAVDKAESDEEFAFKLNFEAVLNLATICAEYNTQLVHISTDYVFNGQQNVPYVETDD 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P +IYG SKL GE + ++LRT+W+YS FG+NF+ M L +E+ ++VV D Sbjct: 121 ASPNSIYGSSKLRGEGAAIGFNPATIVLRTSWLYSEFGANFVKRMRELMQEKESLNVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A+ +A+ ++ + + + G++H + + G SW DFA I E Sbjct: 181 QTGTPTYAVDLAKVVLTVLTKVWDIPG-EYGGVYHYSNE-GVTSWYDFAVAI----RELT 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + +YPT A RPAYS L+ K+ T I+I W+E ++ + + Sbjct: 235 NASCTVAPITSDKYPTAAKRPAYSVLNKEKIKETFGIQIPHWRESLKECIKQL 287 >gi|118588018|ref|ZP_01545428.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614] gi|118439640|gb|EAV46271.1| dTDP-4-dehydrorhamnose reductase [Stappia aggregata IAM 12614] Length = 296 Score = 334 bits (858), Expect = 7e-90, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 168/291 (57%), Gaps = 3/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G NGQ+ ++ + +++ + R +D+ A +PD+IIN AAY Sbjct: 3 RILLTGANGQLGYEVARKGREMGLDLAALDRSQLDITDRAAVADVVQQIAPDLIINTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + + AF++N +G +A+AA G I+ STDYVFDG E P Sbjct: 63 TAVDRAETDSQAAFAVNRDGPRNLAEAAQKHGSVLIHFSTDYVFDGSQPHAYVEQDEVGP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + +YG+SK AGE + + T ++ILRT+WVY + G+NF+ +MLRLA+ER I VV DQ G Sbjct: 123 IGVYGESKEAGEAAIRAVTERHLILRTSWVYGVHGANFVRTMLRLAQERAHIRVVNDQSG 182 Query: 181 TPTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A +A ++++A ++ G FH G V+W FA+ IF + ER G Sbjct: 183 CPTYAADLAEVVLRLAERVLNGQLQQDGYGTFHCAGQ-GQVTWHGFADKIFQLAGERFGK 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I ++P++A RPA S LDCSKLA H + + W+E + ++L ++ Sbjct: 242 KPELIAIPGSEFPSRARRPANSALDCSKLARVHGLALRQWQEALSDMLDHL 292 >gi|34499466|ref|NP_903681.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC 12472] gi|34105318|gb|AAQ61673.1| dTDP-4-dehydrorhamnose reductase [Chromobacterium violaceum ATCC 12472] Length = 310 Score = 334 bits (857), Expect = 8e-90, Method: Composition-based stats. Identities = 106/294 (36%), Positives = 149/294 (50%), Gaps = 6/294 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPAAY 60 + L+ G NGQ+ L E+I R ++DL PD+I+NPAAY Sbjct: 6 RILITGKNGQVGHELLRALAPLGELIATDRRELDLTWDDARIEQALDQHGPDIIVNPAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA G IA+ G ++ STDYVF G P E T P Sbjct: 66 TAVDKAESDEATAHAVNACAVGVIARWTARHGALLVHYSTDYVFSGDGERPWREDDATGP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGEE + ++ILRT+WV+ G+NFL +ML+L +ER + VV DQ G Sbjct: 126 QSVYGRSKLAGEEAIRHAAPRHLILRTSWVFGAHGANFLKTMLKLGQERDSLKVVNDQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 P SA IA ++ + G +H+ A G SW +A Y+ +A G P Sbjct: 186 APASAAMIADVSAELIRRYLAAPSGFAFGTYHL-APRGETSWHGYASYLLQRAASYGLPL 244 Query: 240 ---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I + YP A RPA S L C KL + I + W+ GV +L + Sbjct: 245 KIDPANIQGIPSSDYPLPAKRPANSRLSCDKLKSAFGIELPEWRSGVDQVLAQL 298 >gi|300114907|ref|YP_003761482.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113] gi|299540844|gb|ADJ29161.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus watsonii C-113] Length = 294 Score = 334 bits (857), Expect = 9e-90, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 167/288 (57%), Gaps = 3/288 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L E+ GR ++L + + P +I+N AAYT Sbjct: 7 RILLVGASGQVGWELQRSLAPLGEVFIPGRERLNLAQVDSIRPYLAEIQPTLIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+EPE A +IN + G +A+ A G I+ STDYVFDG P E PL Sbjct: 67 AVDKAEEEPEQALAINGKAPGVLAETARQQGAALIHYSTDYVFDGQGVYPYREGDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAGE+ +A+ Y+ILRT+WVY + G NFLL+M RLA+ER ++VV DQ+GT Sbjct: 127 NVYGQTKLAGEQAIAAVGGAYLILRTSWVYGLRGHNFLLTMQRLAQEREVLTVVNDQWGT 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + IA QI S+ GI+H++ GG +W FA+ I A+ GP Sbjct: 187 PTWSRLIAEGTAQIVAQSRGQRQDSIPQAGIYHLSC-GGKTTWHGFAQAILARLAQGAGP 245 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ I + YP A RPA+SCLD +++ +T I++ +W+ + L Sbjct: 246 VARLEAIPSADYPIPARRPAFSCLDNTRIKDTFGIQLPSWRTALELAL 293 >gi|150009110|ref|YP_001303853.1| putative dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis ATCC 8503] gi|255015731|ref|ZP_05287857.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_7] gi|262384010|ref|ZP_06077146.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B] gi|149937534|gb|ABR44231.1| putative dTDP-4-dehydrorhamnose reductase [Parabacteroides distasonis ATCC 8503] gi|262294908|gb|EEY82840.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_33B] Length = 287 Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 161/292 (55%), Gaps = 10/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + Q + +D+ + + L ++N Sbjct: 1 MKTVLVTGANGQLGNSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E Sbjct: 61 AAYTAVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P+++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + D Sbjct: 121 TCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A A++ + + + GI+H + D G SW DF I + Sbjct: 181 QVGTPTYAGDLAVAMLAVLER--AEAGKFIPGIYHFS-DEGVCSWYDFTVKILQIA---- 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V I TK YPT A RP YS L+ K+ +T+ + I W+ + + N Sbjct: 234 GMNNRVIPIETKDYPTPASRPHYSVLNKGKIKSTYGLTIPHWETSLAYCMNN 285 >gi|330995799|ref|ZP_08319696.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT 11841] gi|329574529|gb|EGG56094.1| dTDP-4-dehydrorhamnose reductase [Paraprevotella xylaniphila YIT 11841] Length = 295 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 107/293 (36%), Positives = 155/293 (52%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + + ++D+ SF + D ++N Sbjct: 10 MKNILVTGCNGQLGNEMQLLATGYPEFNYFFTDVKELDITDENAVKSFVKTNGIDCVVNC 69 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + +N G +AKA G I +STDYVFDG + P E P Sbjct: 70 AAYTAVDKAEADEAFCNILNHIAPGYLAKAVHEQGGCMIQVSTDYVFDGTTHIPYREEEP 129 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P +YG++KLAGEE V VI+RTAW+YS FG+NF+ +MLRL +E+ + V+ D Sbjct: 130 TCPATVYGRTKLAGEEAVMRNCPESVIIRTAWLYSTFGNNFVKTMLRLGREKESLGVIFD 189 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI + + GI+H + + G +SW DF + I + G Sbjct: 190 QIGTPTYARDLAVAIFAVLTQ------DFVPGIYHFSNE-GAISWYDFTKAIHRIA---G 239 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T++YP A RP YS LD +K+ T++I I W++ + + + Sbjct: 240 ITTCKVRPLHTEEYPAPAARPHYSVLDKTKIKETYHIDIPYWEDSLAECIQKL 292 >gi|218680959|ref|ZP_03528856.1| putative dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 894] Length = 295 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 150/291 (51%), Positives = 196/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VE+ VGRP++DL P+ A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEVSVVGRPEMDLADPESIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+AKAA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAKAAARIGVPVIHISTDYVFSGDKTSAYSEKDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRGIFH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGIFHLTG-SGEASWADFAEEIFAALLKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 SVRIERIPTADYPTPAKRPANSRLNGEKLARTYGIRLPEWKKSMTVVMQDL 290 >gi|90962540|ref|YP_536456.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius UCC118] gi|90821734|gb|ABE00373.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius UCC118] Length = 278 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 153/293 (52%), Gaps = 19/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ K ++F P+V+ + AA Sbjct: 1 MKILITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKKAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSP 117 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG + P Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDGNRTSGEYLPDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +ML LAK +++VV D Sbjct: 121 KGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT +A + + N IE G++H D G SW +FA+ I ++ Sbjct: 181 QIGRPTWTRTLAEFLTYLVDNKIE------YGVYHCCND-GQCSWYEFAKEILKDT---- 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + QYPT A RP YS + KLA WKE + L + Sbjct: 230 --DVDVQPVTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|261868368|ref|YP_003256290.1| hypothetical protein D11S_1708 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413700|gb|ACX83071.1| hypothetical protein D11S_1708 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 294 Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 164/289 (56%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ +SL+ + V + E++ + ++D+ S SF P+VIIN AA Sbjct: 3 RLLITGAGGQLGRSLAKLLVDNGRYEVLALDFSELDITNKDMVFSIIDSFKPNVIINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+AE E A+S+N G +A+AA +++STDYVFDG E + Sbjct: 63 YTSVDQAELEVSSAYSVNVRGVQYLAEAAIRHNSAILHVSTDYVFDGYKSGKYKETDIIH 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK GE + + + +ILRT+W + +G+NF+ +MLRLAK R + VV DQ Sbjct: 123 PLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGNNFVKTMLRLAKNRDILGVVADQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG- 238 G PT + IA +IQIA +I +T GI+H T + VSW DFA IF E+ + Sbjct: 183 GGPTYSGDIASVLIQIAEKII-VGETVKYGIYHFTGE-PCVSWYDFAIAIFDEAVAQKVL 240 Query: 239 -PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 EDVPLVNAITTADYPTLAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 289 >gi|332883225|gb|EGK03508.1| dTDP-4-dehydrorhamnose reductase [Dysgonomonas mossii DSM 22836] Length = 317 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 163/292 (55%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 LV G+NGQ+ + + + ++D+ + F + IIN A Sbjct: 29 NILVTGSNGQLGNEIRRISANHENNFRFFFTDVAELDITDLRSVDFFIKENNIKYIINCA 88 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ ++ + IN + + +AA + I+ISTDYV+DG + P E Sbjct: 89 AYTAVDKAEDDVDLCYKINRDAVANLGQAATNNKAKVIHISTDYVYDGTANKPYVETDTV 148 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP ++YGKSK GE ++ + +ILRTAW+YSIFG+NF+ +M++L KER ++VV DQ Sbjct: 149 NPQSVYGKSKQEGEAELLKACADSIILRTAWLYSIFGNNFVKTMIKLGKERETLNVVADQ 208 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+ +A+ I++I ++ GI+H + + G +W DF I E+ G Sbjct: 209 RGTPTNGTDLAKTIVKILD--FSEANGFKPGIYHYSNE-GATTWYDFTLAIHKEA---GI 262 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T+QYP KA RP YS LD +K+ +T N+ I W+E + N + + Sbjct: 263 NTCKVNPITTEQYPVKATRPKYSVLDKTKIKSTFNLTIPKWEESLNNCIKEL 314 >gi|326799491|ref|YP_004317310.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] gi|326550255|gb|ADZ78640.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] Length = 287 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 168/289 (58%), Gaps = 9/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +V+G GQ+ Q L S+C +D ++ + + D+ +F+ ++P IIN AAYT Sbjct: 3 KIIVLGGQGQLGQCLQSVC-EDKAMVFLSSKEADISNEAQLEQWFIQYNPSHIINCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAEDE E A IN G +A+ I+ISTD+VF+G ++E S NP Sbjct: 62 AVDKAEDEKEEASKINTIAPGILARLCKRFDAILIHISTDFVFEGNQTGLLEETSIANPT 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KL GE + N ++I+RT+W+YS + +NF+ +MLRLA++R E+ VV DQ GT Sbjct: 122 GVYGQTKLDGETTIQQIWNKHIIIRTSWLYSEYANNFVKTMLRLAQDREELKVVADQVGT 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A + +I N I + G++H + + G SW DFA +F S Sbjct: 182 PTYARDLAEVLCKIIDNNITEDE---YGLYHYSNE-GVASWYDFAYAVFELS----NTNI 233 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T +PTKA RPAYS +D SK+ N+ I W++ ++N L + Sbjct: 234 RLFPIKTADFPTKAKRPAYSVMDKSKIKKQFNLVIPNWRDSLKNCLQRL 282 >gi|295675699|ref|YP_003604223.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] gi|295435542|gb|ADG14712.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] Length = 308 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 151/292 (51%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L+ +I V R +DL P +I+NPAAYTA Sbjct: 10 ILVTGVNGQVGYELARTLQGLGNVIAVDRSRVDLSNLDQIREVVRDVHPALIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E ++A IN E G +A+ A +G I+ STDYVF+G E PT+P N Sbjct: 70 VDKAEEERDLAMRINGEAPGVLAEEAKKLGAALIHYSTDYVFNGTKEGAYVEDDPTDPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE+ +A+ N+++LRT+WVY G NFLL+MLRL +R E+ VV DQ G P Sbjct: 130 VYGASKLAGEQAIAASGANHLVLRTSWVYGTRGKNFLLTMLRLGADRPELKVVADQIGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T IA + D++ GI+H+ A G SW FA IF + Sbjct: 190 TWCNTIATLTAHLCAQSFAADDSAKWWNERSGIYHLCA-GDSTSWHGFASAIFELADLPN 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I YPT A RPA S + KLA + W++ ++ L + Sbjct: 249 KPNT--LPIPAADYPTPAKRPANSRMSNDKLARVFGLAAPHWRDALKLCLTD 298 >gi|227538985|ref|ZP_03969034.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] gi|227241188|gb|EEI91203.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] Length = 287 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 116/291 (39%), Positives = 164/291 (56%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ ++ G NGQ+ L + D E + R + L + + PDVII+ A Sbjct: 1 MRIVITGANGQLGSELKDILRNDTEKEYHFLDRKHLPLDQTLIIQDLLAQYQPDVIIHAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE E E+A IN IA+ G I ISTDYVFDG S P+ E +P Sbjct: 61 AYTAVDRAESEQELADQINHLATSEIAQYCRIHGTKLIAISTDYVFDGNSNIPLKEDAPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P+NIYG +KL GE + + + +I+RT+WVYS++G+NF+ +M+RL ER EISV+ DQ Sbjct: 121 DPINIYGLTKLKGEHAIQKWLPDGIIIRTSWVYSVYGNNFVKTMVRLMSEREEISVINDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A AI+ I SD + GI+H + + G +SW DFA I E G Sbjct: 181 IGSPTYAHDLALAIVDIIE-----SDKWIGGIYHYSNE-GEISWYDFAVAI----REIKG 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K+ I T QYPT A RP YS LD SK+ + + WK+ ++ ++ Sbjct: 231 LDCKINPIPTTQYPTPAKRPRYSLLDKSKIKHAFKVDTPNWKDSLKVMIAK 281 >gi|313202901|ref|YP_004041558.1| dtdp-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] gi|312442217|gb|ADQ78573.1| dTDP-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] Length = 290 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 155/291 (53%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + + + I ++D+ + ++I+N AA Sbjct: 3 KILVTGANGQLGNEMRKLAPISKTNTFIFTDIEELDITNQEAIRILIQQEQIEIIVNCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ E+A IN + +A +G I++STDYVF G TP E TN Sbjct: 63 YTNVDKAEDDSEMANLINNKAVENLAIVCQDVGATLIHVSTDYVFQGTKNTPCREDEQTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++KLAGE+ V + Y+I RTAW+YS FGSNF+ +M+RL ER ++SVV DQ Sbjct: 123 PLGVYGQTKLAGEQSVQNSGCKYLIFRTAWLYSAFGSNFVKTMIRLTDEREKLSVVFDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q +L GI+H + + G SW DFA I +A Sbjct: 183 GTPTYAGDLAALIFQTIE---TKQYETLNGIYHYSNE-GVCSWYDFAIEI---AALAAHD 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RPA+S LD +K+ N ++ WK ++ + + Sbjct: 236 TCDIQPCHSDEFPSKVKRPAFSVLDKTKVKADFNCKVPHWKVSLQKCMKEL 286 >gi|254253074|ref|ZP_04946392.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] gi|124895683|gb|EAY69563.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] Length = 297 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 149/291 (51%), Gaps = 9/291 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ L ++ R +DL +F P +I+NPAAYTA Sbjct: 12 ILVTGVTGQVGFELLRALQGLGRVVPCDRSMLDLSDLDRVRAFVRDLKPSLIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E+A +N + A+ A G I+ STDYVFDG P E TNPLN Sbjct: 72 VDKAESEIELARRLNVDVPRVFAEEAARSGSTLIHYSTDYVFDGTKAEPYVETDATNPLN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KL GE +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G P Sbjct: 132 AYGATKLDGEHAIAATGCAHLILRTSWVYGRRGRNFLLTMLKLGAERPELRVVADQIGAP 191 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T A IA A I ++DT G++H+TA G SW FAE IF + R Sbjct: 192 TWARTIAAATSHIVAQRAASADTDWWARRSGVYHLTA-AGATSWCGFAEAIFAMAPHR-- 248 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I + YPT A RPA S L KL T +++ W+ ++ L Sbjct: 249 --PSVVPISSDDYPTPAKRPANSRLALEKLTETFGLQMPDWRSALQLCLSE 297 >gi|307265776|ref|ZP_07547327.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919171|gb|EFN49394.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter wiegelii Rt8.B1] Length = 298 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 155/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-------------VGRPDIDLLKPKDFASFFL 47 M+ L+ G GQ+A L S+ + I ++D+ F Sbjct: 1 MRLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLTSVLRFVD 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VDK E + AF +NA G +A AA +G +++STDYVF+G+ Sbjct: 61 EYRPDIIINCAAYTNVDKCESDIGTAFKVNAIGPRNLAMAAQRVGAKLLHVSTDYVFNGV 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + N Y I+RTAW+Y +G NF+ ++L+ AK Sbjct: 121 GNVPFREYDIPEPINVYGKTKLLGEQYVREFCNRYFIVRTAWLYGKYGRNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T + G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAHHILKLVL-------TEEYGIYHCTGN-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V I + + A RP YS LD L T ++ WK+ ++ + Sbjct: 233 KIVEYA----GIDCTVVPITSDKIDRPAKRPFYSSLDNMMLRCTIGDKMRNWKDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 DDL 291 >gi|3132256|dbj|BAA28133.1| dTDP-4-keto-L-rhamnose reductase [Actinobacillus actinomycetemcomitans] Length = 294 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 164/289 (56%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+ +SL+ + V + E++ + ++D+ S SF P+VIIN AA Sbjct: 3 RLLITGAGGQLGRSLAKLLVDNGRYEVLALDFSELDITNKDMVFSIIDSFKPNVIINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+AE E A+S+N G +A+AA +++STDYVFDG E + Sbjct: 63 YTSVDQAELEVSSAYSVNVRGVQYLAEAAIRHNSAILHVSTDYVFDGYKSGKYKETDIIH 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK GE + + + +ILRT+W + +G+NF+ +MLRLAK R + VV DQ Sbjct: 123 PLCVYGKSKAEGERLLLTLSPKSIILRTSWTFGEYGNNFVKTMLRLAKNRDILGVVADQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + IA +IQIA +I +T GI+H T + VSW DFA IF E+ + Sbjct: 183 GGPTYSGDIASVLIQIAEKII-VGETVKYGIYHFTGE-PCVSWYDFAIAIFDEAVAQKVL 240 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 241 ENVPLVNAITTADYPTLAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 289 >gi|89073288|ref|ZP_01159818.1| dTDP-4-dehydrorhamnose reductase [Photobacterium sp. SKA34] gi|89050998|gb|EAR56462.1| dTDP-4-dehydrorhamnose reductase [Photobacterium sp. SKA34] Length = 296 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 121/293 (41%), Positives = 172/293 (58%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G+NGQ+ L + EI+ V R ++D+ D F P++IIN A Sbjct: 1 MKVLITGSNGQVGSCLVKQLQNCTNTEILAVDRTELDITSKSDVIKIVDEFKPNIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E E++FSIN +G +A+AA++IG ++ISTDYVF G E Sbjct: 61 AHTAVDKAETEIELSFSINRDGPLYLAQAAENIGAALLHISTDYVFAGDKEGTYSETDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG SKLAGE V + +ILRTAWV+ G+NF+ +MLRLA++R E+S+V DQ Sbjct: 121 DPQGVYGTSKLAGEIAVLEACSRTIILRTAWVFGEKGNNFVKTMLRLAQQRNELSIVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLI---ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 FG PT A IA A+I IA N++ + D+S GI+H + SW FA+ IF ++ E Sbjct: 181 FGGPTYAGDIAGALIIIAKNIMIQGADFDSSKYGIYHFSG-FPHTSWCGFAQKIFNKAVE 239 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +G V I T YPT A RPA S LD K+ ++++S W+ + + Sbjct: 240 QGVLNKAPLVKGINTADYPTPAKRPANSKLDTKKIIEIFSVQVSDWERALNKL 292 >gi|254478581|ref|ZP_05091955.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM 12653] gi|214035510|gb|EEB76210.1| dTDP-4-dehydrorhamnose reductase [Carboxydibrachium pacificum DSM 12653] Length = 298 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-------------VGRPDIDLLKPKDFASFFL 47 M+ L+ G GQ+A L S+ + I ++D+ K F Sbjct: 1 MRLLITGARGQLALQLRSIIEKGRSEIGEIDPIYKEAVIKYTSHDELDITDLKSVLRFID 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VDK E + + AF +NA G +A AA +G ++I+TDYVF+G Sbjct: 61 EYKPDIIINCAAYTNVDKCESDVDAAFKVNAIGPRNLAMAAQRVGAKLLHIATDYVFNGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+N+YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L+ AK Sbjct: 121 GNVPFREYDIPQPINVYGKTKLLGEQYVREFCDRYFIVRTAWLYGKYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQKGNPTNAEDLAYHILKLVL-------TEEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V I + + A RP YS LD L T + W++ ++ + Sbjct: 233 KIVEYA----GINCTVVPITSDKINRPAKRPFYSSLDNMMLRCTIGDEMRNWEDALKAFI 288 Query: 288 VNI 290 ++ Sbjct: 289 EDL 291 >gi|224026507|ref|ZP_03644873.1| hypothetical protein BACCOPRO_03264 [Bacteroides coprophilus DSM 18228] gi|224019743|gb|EEF77741.1| hypothetical protein BACCOPRO_03264 [Bacteroides coprophilus DSM 18228] Length = 288 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 111/293 (37%), Positives = 164/293 (55%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L+ G NGQ+ + + ++ ++D+ K A++ D+++N Sbjct: 3 MKNVLITGANGQLGNEMRLLAEKNTGYHYYFTDVAELDICDEKAVAAYIEEHLIDIVVNC 62 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED E+ +N G +AKA S G I +STDYVFDG + P E P Sbjct: 63 AAYTAVDKAEDNVELCDRLNHLAPGYLAKAIQSRGGALIQVSTDYVFDGSAHVPYGEGQP 122 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P ++YG +KLAGE++ Y ++ VI+RTAW+YS FG+NF+ +MLRL KER + VV D Sbjct: 123 TCPDSVYGSTKLAGEQEALKYCSSTVIIRTAWLYSAFGNNFVKTMLRLGKERESLGVVFD 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI I I + G++H + + G SW DF + IF + G Sbjct: 183 QVGTPTYARDLAAAIFTILDKGI------VPGVYHFSNE-GVCSWYDFTKMIFRLA---G 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T +YP KA+RP YS LD + + T+ + I W + ++ + + Sbjct: 233 ITSCQVKPLHTCEYPAKANRPHYSVLDKTLIKETYGVEIPYWVDSLQECVQKL 285 >gi|163803298|ref|ZP_02197177.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. AND4] gi|159172935|gb|EDP57773.1| dTDP-4-dehydrorhamnose reductase [Vibrio sp. AND4] Length = 293 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 167/290 (57%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ L+ D +E++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCNGQVGSCLTKQLASDNNIEVLALDRQHLDITNRDAVHAVVTEFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+ A S+G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVKLSYAINRDGPQYLAQTAQSMGAAILHISTDYVFEGNKNGEYAESDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVTKACDKHIILRTAWVFGENGNNFVKTMLRLGENRDALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+IQIA I T G++H + VSW DFA+ IF + +G Sbjct: 181 FGGPTYAGDIASALIQIAKR-ITQGKTVEYGVYHYSG-LPHVSWFDFADTIFDIAVGQGI 238 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 ++ I T QYPT A RP+ S L KL +I S WK + NI Sbjct: 239 FEKKPRLTSIKTDQYPTPAKRPSNSRLSTHKLTQAFSIEASDWKAALSNI 288 >gi|50982341|gb|AAT91794.1| putative dTDP-L-rhamnose processing protein [Yersinia enterocolitica] Length = 292 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 176/290 (60%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ ++ G +GQ+ SL VE++ GR ++D+ F PD IIN A Sbjct: 1 MRVIITGAHGQVGCSLVEKFQDQDKVELLATGRDELDITNQSAVDEIIEQFKPDYIINSA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+E E++++IN +G +AKAA+ +G ++ISTDYVFDG + +E SPT Sbjct: 61 AYTAVDKAEEEIELSYAINHDGVAHLAKAANKMGAVLLHISTDYVFDGENEAAYEETSPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYGKSKLAGE +A + ++I+RT+WV+ G+NF+ +MLRL +S+V DQ Sbjct: 121 KPKSIYGKSKLAGELAIAEAMDKFLIVRTSWVFGTHGNNFVKTMLRLGTTHECLSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER-- 236 FG PT + IA A++++ I++ +T G +H + + VSW +FA+ IF ++ ++ Sbjct: 181 FGGPTYSDDIANALVKMV-KFIDDGNTPEWGCYHFSGE-PHVSWYEFAKVIFNKARDKKI 238 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T +YPT+A RPA S L+C+K+ NI S W+ + NI Sbjct: 239 IDKLPTLSPINTSEYPTRASRPANSRLNCNKIKAQFNIEPSNWQVALNNI 288 >gi|296505691|ref|YP_003667391.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis BMB171] gi|296326743|gb|ADH09671.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bacillus thuringiensis BMB171] Length = 284 Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 159/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + Q +E+ +G D+D+ F + PD II+ AA Sbjct: 1 MKILVTGYNGQLGYDVVKRGEKQGLEMQGIGIEDLDITNEAAVYEFVDNVKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDK+ED+ E+ +++N EG +A AA + +YISTDYVFDG E N Sbjct: 61 YTAVDKSEDDKELCWNVNVEGTKYLATAAKKLNAKFVYISTDYVFDGEGTHAFVETDGPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GE+ V S +N I+R +WV+ I G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVGYYGLTKYEGEKVVKSLIDNNFIVRISWVFGINGNNFIKTMLRLGETRNELNVVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SWA+FA+ IF + G Sbjct: 181 GSPTYTYDLARLLVDMVV-------TEKYGTYHATNE-GFCSWAEFAQEIFEIA----GQ 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT+A RP S + KL + + WK+ ++ + + Sbjct: 229 DVKVNSITTEEYPTRAVRPKNSRMSKQKLIDNGFEPLQDWKKATKHYITQL 279 >gi|146280478|ref|YP_001170631.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|14717006|emb|CAC44168.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri] gi|145568683|gb|ABP77789.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 304 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 113/286 (39%), Positives = 160/286 (55%), Gaps = 2/286 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L S +++ +G +DL P+ PD+IIN AAY Sbjct: 1 MKILITGSKGQLARELQSELAGTGKLLALGHNALDLAVPEQIREQVRLLRPDLIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E AF++NA G +A+ A +G+P I+ STDYVFDG P DE NP Sbjct: 61 TAVDPAETHREQAFAVNARGPQVLAEEAARLGVPLIHYSTDYVFDGRKTEPYDEHDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ + + ++ILRT+WVYS G NFLL+M RL +ER +SVV D+ G Sbjct: 121 LGVYGASKLAGEQAIQAVGGEHLILRTSWVYSQHGKNFLLTMQRLLQERDALSVVSDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR ++ G++H+TA G SW FA I + G Sbjct: 181 APTWAATIARVTAELVRKR-NAGQAGPSGLYHLTA-SGETSWYGFACSIAERLRQEGRLR 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +++ I +K YPT A RP S L+C++L +++ W+ + Sbjct: 239 AEITPILSKDYPTAAQRPLNSRLNCARLQQDWGVQLPDWETALHEC 284 >gi|301310888|ref|ZP_07216817.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|300830951|gb|EFK61592.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 287 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 10/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + Q + +D+ + + L ++N Sbjct: 1 MKTVLVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E Sbjct: 61 AAYTAVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P+++YG++KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + D Sbjct: 121 TCPVSVYGRTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A A++ + + + GI+H + D G SW DF I + Sbjct: 181 QVGTPTYAGDLAVAMLTVLER--AEAGKFIPGIYHFS-DEGVCSWYDFTVKILQIA---- 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V I TK YPT A RP YS L+ K+ +++ + I W+ + + N Sbjct: 234 GMNNRVIPIETKDYPTPASRPHYSVLNKGKIKSSYGLTIPHWETSLAYCMNN 285 >gi|228961526|ref|ZP_04123136.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798144|gb|EEM45147.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 284 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 157/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + Q +E+ +G D+D+ F PD II+ AA Sbjct: 1 MKILVTGYNGQLGYDVVKRGEKQGLEMQGIGIEDLDITNEAAVYEFVDKVKPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDK+ED+ E+ +++N EG + AA + +YISTDYVFDG E N Sbjct: 61 YTAVDKSEDDKELCWNVNVEGTKYLTTAAKKLNAKFVYISTDYVFDGEGTHAFVETDAPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GE+ V S +N I+R +WV+ I G+NF+ +MLRL + R E++VV DQ Sbjct: 121 PVGYYGLTKHEGEKVVRSLIDNNFIVRISWVFGINGNNFIKTMLRLGETRNELNVVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SWA+FA+ IF + G Sbjct: 181 GSPTYTYDLARLLVDMVV-------TEKYGTYHATNE-GFCSWAEFAQEIFKIA----GQ 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT+A RP S + KL + + WK+ ++ + + Sbjct: 229 DVKVNSITTEEYPTRAVRPKNSRMSKQKLIDNGFEPLQDWKKATKHYITQL 279 >gi|332880173|ref|ZP_08447855.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681932|gb|EGJ54847.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 295 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 153/293 (52%), Gaps = 13/293 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ + + E ++D+ K SF D I+N Sbjct: 10 MKNILVTGCNGQLGNEMQLLAAGHPEFNYFFTDVKELDITDEKAVKSFVGMHEIDCIVNC 69 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE + +N G +AKA G I +STDYVFDG + P E P Sbjct: 70 AAYTAVDKAESDEAFCDLLNHTAPGYLAKAVHERGGCMIQVSTDYVFDGTAHIPYREEEP 129 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P YG++KLAGEE V V++RTAW+YS FG+NF+ +MLRL +E+ + V+ D Sbjct: 130 TCPATAYGRTKLAGEEAVMRNCPESVVIRTAWLYSTFGNNFVKTMLRLGREKESLGVIFD 189 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A AI + + GI+H + + G +SW DF + I + Sbjct: 190 QIGTPTYARDLAVAIFAVLTQ------DFVPGIYHFSNE-GAISWYDFTKAIHRIADI-- 240 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T++YP A RP YS LD +K+ T++I I W++ + + + Sbjct: 241 -TTCKVRPLHTEEYPAPAARPHYSVLDKTKIKETYHIDIPYWEDSLTECIQKL 292 >gi|332306500|ref|YP_004434351.1| dTDP-4-dehydrorhamnose reductase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173829|gb|AEE23083.1| dTDP-4-dehydrorhamnose reductase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 287 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ L + VE+ G ++D+ + D A F PDV+IN AA Sbjct: 1 MKVLITGKNGQLGWELCHRAPKAGVEVFAFGSSELDITQSGDVAQVFSCVKPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + E A+ +N GA IA A IG +++STD+VFDG P N Sbjct: 61 YTAVDKAESDQENAYLVNETGAVNIANACKDIGARLLHVSTDFVFDGTKHCPYTITDTPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE + + + VI+RTAWVYS G+NF+ +MLRL +E+ ++ +V DQ Sbjct: 121 PLGVYGASKLAGELGIQNVSPEAVIVRTAWVYSTHGNNFVKTMLRLMQEKPQLGIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A+ + + ++G++H T D G SW DFA I + E+G Sbjct: 181 GTPTYAAGLAQWLWAVV------GQGDIKGMYHWT-DAGVASWYDFAVAIQELALEKGLL 233 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I+ +QYPT A RPA+S +D + N + W++ + ++L + Sbjct: 234 KQAIPILPIYAQQYPTPAKRPAFSVIDKTSAENDTGLHTVHWRKQLASMLEQL 286 >gi|146309306|ref|YP_001189771.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145577507|gb|ABP87039.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 287 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L + ++ E++ +GR DL +P L P ++IN AAY Sbjct: 1 MKILISGHTGQVARELQ-LALRKHELVSLGRQAFDLSRPDSLRETILRERPALVINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E+AFS+NAE G +A A + IP I+ STDYVFDG TP E +P Sbjct: 60 TAVDQAEQERELAFSVNAEAPGVMADACFELDIPLIHYSTDYVFDGSKATPYREADTPHP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE+ + +++ILRT+WVYS G NFLL+M RL +ER E+SVV DQ G Sbjct: 120 LGVYGASKAAGEQALRISGCDHLILRTSWVYSQHGRNFLLTMQRLLQEREELSVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A ++ + G +H+T G SW FA I G P Sbjct: 180 APTWAGSIASATTELIDKWQQGR--HHWGTYHLTCQ-GETSWFGFASAIAERLRAAGKPC 236 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I + +YPT A RP S LD +L +R+ W+ + L + Sbjct: 237 ARLRPIPSSEYPTPAQRPLNSRLDGERLEQEWQVRLPDWRAALDACLQRM 286 >gi|300215155|gb|ADJ79571.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius CECT 5713] Length = 278 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 151/293 (51%), Gaps = 19/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKVLITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSP 117 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG + P Sbjct: 61 YTAVDKAEGECKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDGNRTSGEYLPDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N YGK+KLAGEE V Y N Y I+RTAWVY +G NF+ +ML LAK +++VV D Sbjct: 121 KGPRNEYGKAKLAGEEAVQKYCNKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT +A + + N IE G++H D G SW +FA+ I Sbjct: 181 QVGRPTWTRTLAEFLTYLVDNKIE------YGVYHCCND-GQCSWYEFAKEILK------ 227 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + QYPT A RP YS + KLA WKE + L + Sbjct: 228 NTDVDVQPVTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|146294972|ref|YP_001185396.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] gi|145566662|gb|ABP77597.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens CN-32] Length = 294 Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 166/289 (57%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + L + + + + R +D+ + + F PDVIIN AA Sbjct: 5 KVLVTGCNGQVGRCLVTQMQTMSSITLCALERERLDITNREQVDTVVNQFHPDVIINAAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+ ++IN +G +A+AA+ +G ++IS+DYVF G E + Sbjct: 65 YTAVDKAEQEIELCYAINRDGPKYLAEAANQVGALILHISSDYVFSGRKHGLYTEDDIPD 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKLAGE +VA+ ++ILRTAWV+ G NF+ +ML L + E+ VV DQF Sbjct: 125 PLGVYGQSKLAGEIEVANLCPRHIILRTAWVFGEHGKNFVNTMLGLTQTHDELGVVADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PT A IA ++I I I + + GI+H + + VSW FAEYIF ++ + G Sbjct: 185 GGPTYAADIAASLITIT-KAIRLKNGANFGIYHYSGE-PHVSWHQFAEYIFEQAFDVGLI 242 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT+A RPA S LDC K+ I S W+ ++N+ Sbjct: 243 NKEIRVNAITTTDYPTQATRPANSKLDCRKIMKQFGIAPSDWQAALKNL 291 >gi|300313656|ref|YP_003777748.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum seropedicae SmR1] gi|300076441|gb|ADJ65840.1| dTDP-4-dehydrorhamnose reductase protein [Herbaspirillum seropedicae SmR1] Length = 312 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G +GQ+ Q L M + E++ ++DL + SF P +I+N AAY Sbjct: 1 MRILLTGASGQLGQVLQPMLARHGELLAPSSRELDLADRQALQSFLQQARPGLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA +A+ A +G P ++ STDYVFDG S P E PT P Sbjct: 61 TAVDKAESDVARAEAVNALAPMILAQQAQMLGAPLVHFSTDYVFDGKSARPYVETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG++KLAGE+ +A++ + Y ILRT+WVY +GSNFL +M RLA ER ++VV DQ G Sbjct: 121 LNVYGRTKLAGEQGIAAHCDAYWILRTSWVYGCYGSNFLKTMWRLAGEREYLTVVDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 PT IA + ++ + + + G++H++A GG SW FA+ I +G Sbjct: 181 APTWTHTIADTLARMLAHGADAQQSVRDTTGLYHLSA-GGATSWHGFAQRILQLLRAQGE 239 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I + YP A RP S LD L T ++ + TW+E + L Sbjct: 240 TALLDPALVRPIASDAYPAIAQRPRNSRLDTGLLRRTFSLSLPTWEEALERCL 292 >gi|150019561|ref|YP_001311815.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] gi|149906026|gb|ABR36859.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] Length = 279 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 13/289 (4%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + +++E + + R ++D+ PD +I+ AAYT Sbjct: 2 ILVTGVNGQLGYDVVKELNRRNIECLGIDRAELDITDKNAVKDCIGKLKPDCVIHCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AEDE E+ +N G IAKA IG IYISTDYVFDG TP + P Sbjct: 62 AVDRAEDEEEVCAKVNVYGTDNIAKACKEIGAKMIYISTDYVFDGKGNTPFEVEDKIEPH 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+K GE KV + Y I+R +WV+ + G+NF+ +MLRL E+ ++VVCDQ G+ Sbjct: 122 SVYGKTKYEGELKVKEVLDKYFIVRISWVFGVNGNNFIKTMLRLGSEKESLNVVCDQIGS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A + +A + G++H T + G SWA+FA I ++ G Sbjct: 182 PTYTADLAPLLCDMAV-------SEKYGVYHATNE-GFCSWAEFAGEIMKKA----GLSC 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T +YP KA RP S L L + + W+ + L+ + Sbjct: 230 KVNPIPTSEYPAKAQRPFNSRLSKKSLVDNGFGLLPNWENALDRYLIEL 278 >gi|167627478|ref|YP_001677978.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597479|gb|ABZ87477.1| dTDP-4-dehydrorhamnose reductase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 301 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 110/301 (36%), Positives = 159/301 (52%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV G+NGQ+ L + +Q+ I +D+ + F + VI Sbjct: 1 MKILVTGSNGQLGSELKELVFNSKLEIQNYTFIFADSKLLDITDHQAVKKFIVDNDIKVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVDKAE + E+A IN +A+ A I I+ISTDYVF+G S P E Sbjct: 61 INCAAYTAVDKAETDIEMADKINHLAVANMAELAKKYSIKLIHISTDYVFNGESFRPYIE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 NP +IYG +KLAGEE + +I+RT+WVYS +G+NF+ +MLRL +E+ + Sbjct: 121 SDKANPQSIYGATKLAGEEVIQRINPKDSIIIRTSWVYSSYGNNFVKTMLRLGREKDTLG 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHN----LIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 V+ DQ GTPT A +A+AI+ I + +D + I++ + + G SW DFA+ I Sbjct: 181 VIYDQVGTPTYAKDLAKAILDILSQVDSRVKHENDNEVVEIYNYSNE-GVTSWYDFAKEI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + +V I T YPT A RP YS L+ K+ + I WK +++ + Sbjct: 240 MSIAK----IECQVNPIETVDYPTPAKRPHYSLLNKKKIKQDFGLSIPYWKNSLQDCIYR 295 Query: 290 I 290 I Sbjct: 296 I 296 >gi|327478700|gb|AEA82010.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 304 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 113/286 (39%), Positives = 160/286 (55%), Gaps = 2/286 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+A+ L S +++ +G +DL P+ PD+IIN AAY Sbjct: 1 MKILITGSTGQLARELQSELAGTGKLLALGHNALDLAVPEQIREQVRLLRPDLIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E AF++NA G +A+ A +G+P I+ STDYVFDG P DE NP Sbjct: 61 TAVDPAETHREQAFAVNARGPQVLAEEAARLGVPLIHYSTDYVFDGRKAEPYDEHDTPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE+ + + ++ILRT+WVYS G NFLL+M RL +ER +SVV D+ G Sbjct: 121 LGVYGASKLAGEQAIQAVGGEHLILRTSWVYSRHGKNFLLTMQRLLQERDALSVVSDEVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IAR ++ G++H+TA G SW FA I + G Sbjct: 181 APTWAATIARVTAELVRKR-NTGQAGPSGLYHLTA-SGETSWYGFACSIAERLRQEGRLR 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +++ I +K YPT A RP S L+C++L +++ W+ + Sbjct: 239 AEITPILSKDYPTAAQRPLNSRLNCARLQQDWGVQLPDWETALHEC 284 >gi|114332357|ref|YP_748579.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas eutropha C91] gi|114309371|gb|ABI60614.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas eutropha C91] Length = 295 Score = 332 bits (851), Expect = 4e-89, Method: Composition-based stats. Identities = 115/295 (38%), Positives = 169/295 (57%), Gaps = 11/295 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINPAA 59 ++ G NGQ+ L ++I + R D+ DL + PDVI+N AA Sbjct: 1 MLFGKNGQVGWELQRSLAPLGKLIALDRRDLHYCGDLTNLAGMTHTLQAIRPDVIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE+EPE+AF IN E +A+ A+ +G I+ STDYVFDG P E PT Sbjct: 61 YTAVDQAENEPELAFRINTEAPELLAQLAEQMGAWLIHYSTDYVFDGSGERPWLETDPTL 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+NIYG+SKL GEE + ++ILRT+WVY+ G NF+ ++LRLA+E+ +++++ DQ Sbjct: 121 PVNIYGQSKLRGEESIRKSNCKHLILRTSWVYAARGKNFIRTILRLAQEKEQLTIIDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A Q L+ + + S GI+H+TA+ G VSW ++A+++ + E Sbjct: 181 GAPTGAELLADVTAQAIPQLLRHPEKS--GIYHVTAN-GEVSWCNYAQFLLNFACEHNLL 237 Query: 240 ----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S V I +K + T A RP S L+ KL NT N+ + W+ GV +L I Sbjct: 238 VKVRPSAVTPIHSKAFVTSAKRPLNSRLNTDKLRNTFNLYLPHWQTGVTRMLSEI 292 >gi|86357151|ref|YP_469043.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42] gi|86281253|gb|ABC90316.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CFN 42] Length = 295 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 149/291 (51%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + ++I VGRP++DL P A+ F + DVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGLDISAVGRPEMDLSDPASVAAAFSALRADVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I++STDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVPVIHLSTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRLA+ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGNNFLKTMLRLAETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA +I + + SLRG FH+T G SWADFAE IF E + GG Sbjct: 181 GCPTSALDIADAILAIATRIITDPEPSLRGTFHLTG-SGEASWADFAEEIFAELLKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 SVGVERIPTADYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 290 >gi|127512334|ref|YP_001093531.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126637629|gb|ABO23272.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 288 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 117/288 (40%), Positives = 164/288 (56%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L EI+ V ++D+ + + F PDVIIN AA+ Sbjct: 1 MKVLVTGCNGQVGHCLVEQLQGKAEILAVDAQELDITQQQAVNDVVNKFIPDVIINAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E E ++ +N +G +A+AA SIG ++ISTDYVF+G +E TNP Sbjct: 61 TAVDRAETEQEQSYKVNCDGPKYLAQAAQSIGASILHISTDYVFEGNKDGLYNEEDVTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGE+ V ++ILRTAWV+ G+NF+ +MLRL +ER +S+V DQFG Sbjct: 121 QGVYGASKLAGEQAVIQACEKHIILRTAWVFGQHGNNFVKTMLRLGQERDSLSIVGDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A IA A+I IA ++ + G++H + V+W FA+ IF ++ E+ Sbjct: 181 GPTYAADIAVALIHIAQQ--AHAGKNAWGVYHFSG-MPHVNWYQFADAIFTKAVEQNILE 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T QYPT A RP S LDC K+ + I S W + + I Sbjct: 238 KAPTLTSISTLQYPTPAKRPTNSKLDCHKIKSIFGILPSDWVKALTEI 285 >gi|237808787|ref|YP_002893227.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] gi|237501048|gb|ACQ93641.1| dTDP-4-dehydrorhamnose reductase [Tolumonas auensis DSM 9187] Length = 299 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 110/290 (37%), Positives = 164/290 (56%), Gaps = 4/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G GQ+ L+ +++ + R +D+ P+ S + PDV+IN AA+ Sbjct: 7 KIMITGAYGQVGFCLTQQAQANGWDVLAIDRDKLDITDPQAVNSLVKEYQPDVVINAAAH 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + +F+IN +G +A+AA S+ ++ISTDYVF G E P P Sbjct: 67 TAVDKAETEIDASFAINRDGPKYLAEAATSVDAAMLHISTDYVFSGDKDGTYSEADPVAP 126 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGEE V + + ++ILRTAWV+ G+NF+ +MLRL +R ++ +V DQFG Sbjct: 127 QGVYGASKLAGEEAVITANSKHIILRTAWVFGEHGNNFVKTMLRLGSQRDQLGIVADQFG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A IA A++ +A + T GI+H + V+W FA+ IF ++ E Sbjct: 187 GPTYAGDIAAALLVMAEKAVAAPATVSWGIYHFAGE-PHVNWHQFAQAIFDKAVEHKLLA 245 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ + T YPT A RPA S LDC K+ N I+ S W + + NI+ Sbjct: 246 KAPQLNALTTADYPTPAKRPANSRLDCRKIFNEFGIQPSDWHKALENIVA 295 >gi|186477067|ref|YP_001858537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] gi|184193526|gb|ACC71491.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] Length = 297 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 114/298 (38%), Positives = 155/298 (52%), Gaps = 13/298 (4%) Query: 1 MK------CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK L+ G NGQ+ L+ I+ R ++DL + P +I Sbjct: 1 MKASAQRTILLTGVNGQVGFELARSLQGLGTIVAPRRDELDLSDLEQVRRVVREVKPVLI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +NPAAYTAVDKAE + + A INAE +A+ A +G ++ STDYVFDG E Sbjct: 61 VNPAAYTAVDKAETDVDAAMRINAEAPSVLAEEAKRLGAALVHYSTDYVFDGTKDGAYVE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 NP+N+YG+SKL GE+ +A+ ++I RT+WVY G NFLL+MLRL ER E+SV Sbjct: 121 SDAVNPINVYGRSKLEGEQAIAAVGGAHMIFRTSWVYGTRGKNFLLTMLRLGAEREELSV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLI----ENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V DQFG PT + IA + + E G++H+TA GG SW FAE IF Sbjct: 181 VADQFGAPTWSNTIATSTAHVLAQATATDGEQWWREHSGVYHLTA-GGVTSWYGFAEAIF 239 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 S+ + P V I YPT A RP S + KLA +R W+E ++ + Sbjct: 240 EFSSLQKKPA--VKPIPASAYPTPASRPTNSSMSNDKLAAAFGVRAPDWREALQLCMA 295 >gi|237732731|ref|ZP_04563212.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229384197|gb|EEO34288.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 280 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 156/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C +++E + V ++D+ A S + + +I+ AA Sbjct: 1 MKLLVTGVKGQLGHDIVNECNNRNIEAVGVDVEEMDITDAGKVAEVIKSGNYNAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E+ +N +G IA + IP +Y STDYVFDG T E+ + Sbjct: 61 WTAVDKAEDEVELCTKVNVDGTRNIANICKELDIPMMYFSTDYVFDGQGETEWKEYDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V S + I+R AWV+ I G+NF+ +MLRL KER + VV DQ Sbjct: 121 PLNVYGQTKYEGELIVESL-PKHFIVRIAWVFGINGNNFIKTMLRLGKERGAVCVVDDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T GI+H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGIYHATNE-GLCSWYEFACEIFKQA----GM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + + L R+ TW++ + L I Sbjct: 228 SVEVTPVDSNAFPAKAKRPNNSRMSKAMLDKNGFGRLPTWQDALSRYLKEI 278 >gi|256841670|ref|ZP_05547176.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D13] gi|256736564|gb|EEU49892.1| dTDP-4-dehydrorhamnose reductase [Parabacteroides sp. D13] Length = 287 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 160/292 (54%), Gaps = 10/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ S+ + Q + +D+ + + L ++N Sbjct: 1 MKTVLVTGANGQLGSSIHARISQYPGYNFLFTDIDTLDICDKEAVRKYVLENDVQYVMNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE+ ++ IN + + +AA ++G I++STDYVFDG S P E Sbjct: 61 AAYTAVDKAEEHEDLCMRINRDAVRNLGEAAHAVGAKVIHVSTDYVFDGTSCRPYLESDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P+++YG +KLAGE+ + + VI+RTAW+YS +G+NF+ ++LRL KER E+ + D Sbjct: 121 TCPVSVYGHTKLAGEQALMEVCPDSVIIRTAWLYSEYGNNFMKTVLRLGKERDELRFIFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +A A++ + + + GI+H + D G SW DF I + Sbjct: 181 QVGTPTYAGDLAVAMLTVLER--AEAGKFIPGIYHFS-DEGVCSWYDFTVKILQIA---- 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V I TK YPT A RP YS L+ K+ +++ + I W+ + + N Sbjct: 234 GMNNRVIPIETKDYPTPASRPHYSVLNKGKIKSSYGLTIPHWETSLAYCMNN 285 >gi|110596875|ref|ZP_01385165.1| dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] gi|110341562|gb|EAT60022.1| dTDP-4-dehydrorhamnose reductase [Chlorobium ferrooxidans DSM 13031] Length = 290 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L + PD+D+ S I+N A Sbjct: 1 MNILVTGSRGQLGSELQRVSGLTGSHHYYFYDLPDLDITNAAQVEEICRLHSIQAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + AF +N +G +A+ A ++ISTDYVF+G S +P E Sbjct: 61 AYTAVDKAESDSASAFLVNRDGPAVLARCAKDRNALLVHISTDYVFNGESNSPYRESDRV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P ++YG SK GEE V +++I+RT+W+YS +GSNF+ +MLRL E+ ++VV DQ Sbjct: 121 SPASVYGLSKWEGEEAVRRIGPSHLIIRTSWLYSPYGSNFVKTMLRLGAEKSSLTVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRG-IFHMTADGGPVSWADFAEYIFWESAERG 237 GTPT A +A AI I + G +H + + G SW DFAE I + Sbjct: 181 IGTPTCAADLASAIASILDR---CDLSHCYGETYHYSNE-GVCSWYDFAEAIMELA---- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + + +YPT A RP +S L+ S + + + I W+ + +L I Sbjct: 233 GLSCRVLPVESSEYPTLARRPGFSVLNKSAIKKSWGVEIPHWRSSLATMLREI 285 >gi|167755067|ref|ZP_02427194.1| hypothetical protein CLORAM_00571 [Clostridium ramosum DSM 1402] gi|167705117|gb|EDS19696.1| hypothetical protein CLORAM_00571 [Clostridium ramosum DSM 1402] Length = 280 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 156/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + C +++E + V ++D+ A S + + +I+ AA Sbjct: 1 MKLLVTGVKGQLGHDIVNECNNRNIEAVGVDVEEMDITDAGKVAEVIKSGNYNAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAEDE E+ +N +G IA + IP +Y STDYVFDG T E+ + Sbjct: 61 WTAVDKAEDEVELCTKVNVDGTRNIANICKELDIPMMYFSTDYVFDGQGETEWKEYDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + + I+R AWV+ I G+NF+ +MLRL KER + VV DQ Sbjct: 121 PLNVYGQTKYEGELIVETL-PKHFIVRIAWVFGINGNNFIKTMLRLGKERGAVCVVDDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +++ ++ + T GI+H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLSKLVVDMIQ-------TDKYGIYHATNE-GLCSWYEFACEIFKQA----GM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +P KA RP S + + L R+ TW++ + L I Sbjct: 228 SVEVTPVDSNAFPAKAKRPNNSRMSKAMLDKNGFGRLPTWQDALSRYLKEI 278 >gi|301299656|ref|ZP_07205913.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852750|gb|EFK80377.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 279 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 106/293 (36%), Positives = 153/293 (52%), Gaps = 19/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKVLITGANGQLGQEMQHLLDERGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSP 117 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG + P Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDGNRTSGEYLPDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +M+ LAK +++VV D Sbjct: 121 KGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMINLAKNHDKLTVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT +A + + N +E G++H D G SW +FA+ I ++ Sbjct: 181 QVGRPTWTRTLAEFLTYLVDNKVE------YGVYHCCND-GQCSWYEFAKEILKDT---- 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + QYPT A RP YS + KLA WKE + L + Sbjct: 230 --NVDVQPVTSDQYPTAAFRPHYSVM---KLAKETGFVFPDWKEALDEFLSEV 277 >gi|194337310|ref|YP_002019104.1| dTDP-4-dehydrorhamnose reductase [Pelodictyon phaeoclathratiforme BU-1] gi|194309787|gb|ACF44487.1| dTDP-4-dehydrorhamnose reductase [Pelodictyon phaeoclathratiforme BU-1] Length = 292 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 156/292 (53%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L + + PD+D+ P+ A +VIIN A Sbjct: 1 MNILVTGSRGQLGSELQELSTRSDNHRFFFYDLPDLDITSPERVAELCREHEIEVIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + + AF +N +GA +A A ++ISTDYVF+G S P E P Sbjct: 61 AYTAVDKAESDVDAAFRVNRDGAAVLAACAKERNALLVHISTDYVFNGKSHIPYRETDPA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SK GEE++ ++ I+RT+W+YSI+G+NF+ +MLRL ER ++VV DQ Sbjct: 121 TPLGVYGVSKWEGEERIRDIAPSHWIIRTSWLYSIYGANFVKTMLRLGAERSTLNVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ + + + G +H + + G SW DFA+ I + Sbjct: 181 IGTPTWAADLAGALVSMLERY--DKNNHYAGRYHYSNE-GVCSWYDFAQAIMELAE---- 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + QYP A RP YS L+ S + + + I W+ + +L + Sbjct: 234 LPCRVVPVESSQYPQIAERPHYSVLNKSAIKDEWKLEIPYWRVSLAAMLEKL 285 >gi|304405206|ref|ZP_07386866.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] gi|304346085|gb|EFM11919.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus curdlanolyticus YK9] Length = 299 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +V G NGQ+ L + E+ +GR ++D+ + PDV+I+ AY Sbjct: 5 RIVVTGANGQLGVDLVKHLEELGHEVHGLGRAELDVTSERQVQHTLRELKPDVVIHSGAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EP+ A+ +N G IA AA SIG +Y+STDYVF+G P DEFSP +P Sbjct: 65 TKVDQAEAEPDQAYMVNGYGTANIASAAHSIGAKLVYVSTDYVFNGQGFRPYDEFSPIDP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YGKSK GE + + + I+RT+WVY G+NF+ +ML+L ER +SVV DQ G Sbjct: 125 VNVYGKSKWMGERFIETLHARHYIVRTSWVYGAHGANFVKTMLKLGAERGSVSVVNDQVG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I Q+ +T G +H++ + G SW +FAE IF + G Sbjct: 185 CPTFTKDLAACIGQLI-------ETERYGTYHVS-NSGSCSWHEFAEAIFRHA----GLQ 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + Q+ A RP+YS D L + W+E ++ L + Sbjct: 233 VELTAVTSDQFVRPAKRPSYSVFDHMSLRLGGFPAMRHWEEALKQFLTEL 282 >gi|270261090|ref|ZP_06189363.1| hypothetical protein SOD_a03150 [Serratia odorifera 4Rx13] gi|270044574|gb|EFA17665.1| hypothetical protein SOD_a03150 [Serratia odorifera 4Rx13] Length = 288 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 162/292 (55%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + + ++ +D+ + F PD I+N AAY Sbjct: 1 MRVLLTGAAGQLGRCFIDRLPEGWVLMATDSQQLDITDSSAVSKAVAEFKPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +IN +G G +A AA + IP +++STDYVFDG + P E +P +P Sbjct: 61 TAVDKAESEPERAKAINTDGPGFLAAAAAMLNIPFVHVSTDYVFDGTASEPYCENTPCSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V++RTAWV+S +G+NF+ +MLR+ +R E+ VV DQ+G Sbjct: 121 KSVYGQTKLDGEHAALKANPKTVVIRTAWVFSEYGNNFVKTMLRVGAQRGELGVVSDQYG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A++ + GI+H D VSW DFA+ IF E+ Sbjct: 181 CPTYAGDIAAAVVAMLSKTQV-----PCGIYHYCGDS-AVSWFDFAQIIFEEAQVCTLYP 234 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I + +YPT A RPAYS L K+ N+R S WK+ ++ +L I Sbjct: 235 HQVKVNPIASHEYPTPASRPAYSILSTDKI-CALNLRPSPWKQQLKTVLRKI 285 >gi|219670471|ref|YP_002460906.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium hafniense DCB-2] gi|219540731|gb|ACL22470.1| dTDP-4-dehydrorhamnose reductase [Desulfitobacterium hafniense DCB-2] Length = 287 Score = 331 bits (850), Expect = 6e-89, Method: Composition-based stats. Identities = 109/288 (37%), Positives = 156/288 (54%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + + +E V D D+ + + + + PD +I+ +A Sbjct: 1 MKILVTGVNGQLGYDVCKVLTERGLEHCGVDITDFDITDERAVKDYLIDYHPDAVIHCSA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AED+PE A +IN G IA A +G +YISTDYVF G + T Sbjct: 61 WTAVDAAEDQPEKAVAINVGGVRNIASACKVLGAKLVYISTDYVFSGFGDHFYEVDDETG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGK+KL GE V + Y I+R +W + + G+NF+ +MLRLA+ + E+SVVCDQF Sbjct: 121 PLSVYGKTKLDGEMAVKELLSCYFIVRISWAFGVNGNNFVKTMLRLAERQDEVSVVCDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + +TS G +H T + G SWA+FA IF + G Sbjct: 181 GSPTYTADLAPLLCDMI-------ETSHFGTYHATNE-GICSWAEFAAEIFKLA----GR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T YPTKA RP S L KL R+ W+E + + + Sbjct: 229 AVKVNEIMTCNYPTKAVRPLNSRLSKDKLVEAGFSRLPHWREALSDYM 276 >gi|319761362|ref|YP_004125299.1| dtdp-4-dehydrorhamnose reductase [Alicycliphilus denitrificans BC] gi|330823237|ref|YP_004386540.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans K601] gi|317115923|gb|ADU98411.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans BC] gi|329308609|gb|AEB83024.1| dTDP-4-dehydrorhamnose reductase [Alicycliphilus denitrificans K601] Length = 292 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 156/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L E+ +G + D +P+ A + PDVI+N AA+ Sbjct: 1 MNILLLGKNGQVGWELQRSLAVLGEVTALGHDEADFTQPQAVAQAVRALCPDVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +NA G +A+ A +G ++ STDYVFDG P E P Sbjct: 61 TAVDKAESEPERARLLNATTPGVLAEEAVRLGAWLVHYSTDYVFDGSGSRPWRETDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KL GE + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ DQ+G Sbjct: 121 LSVYGATKLEGERLIQQSGCRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVIDDQWG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER---- 236 PT A +A +L + G++H A GG +W +A+Y+ + + Sbjct: 181 APTGADLLADVTAHAIRHLQQRPQDG--GLYHCVA-GGETTWHSYAKYVVEHARQAQSAI 237 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + T + T A RP S LD +KL +R+ W++GV +L I Sbjct: 238 NIIAKEIAPVPTSAFLTPARRPHNSRLDNAKLQAAFGLRLPPWQQGVARMLTEI 291 >gi|71735408|ref|YP_273240.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555961|gb|AAZ35172.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 301 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 114/300 (38%), Positives = 167/300 (55%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN+E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDLAVLINSEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLI-ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA + H ++ + LRG++H+ A G SW FA ++ + Sbjct: 181 ADQYGAPTGAELIADVTAHMLHRVLGDKHSAELRGVYHLAA-AGETSWHGFARFVLEHAE 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G K+ I T+ YP A RP S L KL T +++ W++G + +L I Sbjct: 240 RNGVQLKVSSDKIGAIPTEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDEI 299 >gi|319957144|ref|YP_004168407.1| dtdp-4-dehydrorhamnose reductase [Nitratifractor salsuginis DSM 16511] gi|319419548|gb|ADV46658.1| dTDP-4-dehydrorhamnose reductase [Nitratifractor salsuginis DSM 16511] Length = 288 Score = 331 bits (849), Expect = 7e-89, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 157/291 (53%), Gaps = 11/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G NGQ+ + + + +D+ + F S S D IIN AAY Sbjct: 3 NVLVTGANGQLGSEIRELSSLFPYIYFFTDQNILDITDKEQITQFVKSNSIDTIINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ A +N +A+ A I ++ISTDYVFDG + TP E TNP Sbjct: 63 TAVDKAEEDKINADKVNHLAVRYLAEIAKEEDIKLLHISTDYVFDGKNYTPYTEEDRTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +KLAGEE + N +I+RT+WVYS +G+NF+ +MLRL KE++++ V+ DQ Sbjct: 123 NGVYGATKLAGEEAMRDINPKNSIIIRTSWVYSGYGANFVKTMLRLGKEKKDLGVIFDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A+ I+ I + N + I+H + + G VSW DFA+ I + Sbjct: 183 GSPTYAKDLAKTILSI----LPNIENEKVEIYHYSNE-GVVSWYDFAKEIMRMAK----L 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I TK+YPT A RP YS L+ SK+ + I WK+ + L + Sbjct: 234 DCTIKPIETKEYPTPAMRPHYSVLNKSKIKKEFGLTIPYWKDSLDECLKTM 284 >gi|91789861|ref|YP_550813.1| dTDP-4-dehydrorhamnose reductase [Polaromonas sp. JS666] gi|91699086|gb|ABE45915.1| dTDP-4-dehydrorhamnose reductase [Polaromonas sp. JS666] Length = 308 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 103/302 (34%), Positives = 157/302 (51%), Gaps = 15/302 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL----KPKDFASFFLSFSPDVIIN 56 MK L+ G NGQ+ L E+ + R DL + A+ PDVI+N Sbjct: 1 MKILLFGKNGQVGWELQRSLAPLGELTALDRHSTDLCGDLGNLQGLAATVQQLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP +A ++NA +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPALARTLNALAPSVLAQEAARLGSLLVHYSTDYVFDGSGTRPWTEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG+SKL GE+ + + + ++I RT+WVY+ G NF +MLRLA+ER + V+ Sbjct: 121 TPAPLSVYGQSKLEGEQLIQAASPRHLIFRTSWVYAARGGNFAKTMLRLAQERERLIVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE- 235 DQFG PT A +A +++ + G++H+ A G SW +A+Y+ ++ Sbjct: 181 DQFGAPTGAELLADVSAHAIRQVLQR--PADAGLYHLVA-SGETSWHGYAKYVLAQAERS 237 Query: 236 -------RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T +PT A RP S LD ++L T + + W++GV +L Sbjct: 238 QEQGRVAIKIIAKAVDPVPTSAFPTPAKRPHNSRLDTTRLQTTFGLTLPPWQQGVDRMLE 297 Query: 289 NI 290 + Sbjct: 298 EV 299 >gi|319953123|ref|YP_004164390.1| dtdp-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237] gi|319421783|gb|ADV48892.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga algicola DSM 14237] Length = 295 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 122/296 (41%), Positives = 172/296 (58%), Gaps = 16/296 (5%) Query: 1 MK----CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK LV G NGQ+A+ L + ++D+ K+ + F + D Sbjct: 1 MKNFKNILVTGANGQLARCLKDASRDYPNYNFFFKTSKELDITNEKEIQTLFTELNFDYC 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYTAVDKAED+ E AF +NAEG +AKA S I+ISTD+VFDG +P E Sbjct: 61 INCAAYTAVDKAEDDKENAFLVNAEGVKFLAKACKSFETVLIHISTDFVFDGTKNSPYTE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNP+N+YG SKL GEE + + NY I+RT+WVYS FG+NF+ +ML+L K+R +SV Sbjct: 121 NDITNPINVYGASKLKGEEYIKNILENYFIIRTSWVYSEFGNNFVKTMLKLGKDRNNLSV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G+PT A +AR I++I +S++ GI H ++ G +SW +FA+ IF ES Sbjct: 181 VDDQIGSPTFAEDLARLILEII-----DSNSLEYGI-HNFSNDGEISWYEFAQEIFQESK 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + +YPTKA RP YS L K+ N + I WK ++ LV++ Sbjct: 235 ----ISIELKPLKSSEYPTKAKRPKYSVLSKLKIRNALSTEIPLWKNSLKKCLVSL 286 >gi|148976930|ref|ZP_01813585.1| dTDP-4-dehydrorhamnose reductase [Vibrionales bacterium SWAT-3] gi|145963804|gb|EDK29064.1| dTDP-4-dehydrorhamnose reductase [Vibrionales bacterium SWAT-3] Length = 294 Score = 330 bits (848), Expect = 9e-89, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 170/290 (58%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ L+ QD I+ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCHGQVGTCLTEQLNQDENTTILALDREHLDITNQDSVNAVVSEFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E E++++IN +G +A+AA +IG ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVELSYAINRDGPKYLAQAAQTIGAAILHISTDYVFEGNKVGDYIETDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE V + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVVQSCDKHIILRTAWVFGESGNNFVKTMLRLGQTRDALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA +IQIA + + S+ G++H + VSW DFA+ IF + ++ Sbjct: 181 FGGPTYAGDIANTLIQIAKRITQGSEIE-YGVYHYSG-LPHVSWFDFADTIFDVAVQQKL 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 SK + I T+QYPT A RP+ S L K+ +I S WK + NI Sbjct: 239 LDSKPTLTSITTEQYPTPAKRPSNSRLSNEKVMANFSIEASDWKVALNNI 288 >gi|190891197|ref|YP_001977739.1| dTDP-4-dehydrorhamnose reductase [Rhizobium etli CIAT 652] gi|190696476|gb|ACE90561.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CIAT 652] Length = 295 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 151/291 (51%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASVAAAFSAQRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGAIA+AA IG+P I++STDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAIAEAAARIGVPVIHLSTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGTFHLTG-SGEASWADFAEAIFAALLKSGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLATTYGIRLPEWKQSMTIVMQDL 290 >gi|315650486|ref|ZP_07903556.1| dTDP-4-dehydrorhamnose reductase [Eubacterium saburreum DSM 3986] gi|315487282|gb|EFU77594.1| dTDP-4-dehydrorhamnose reductase [Eubacterium saburreum DSM 3986] Length = 286 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 149/295 (50%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF----SPDVII 55 M+ LV G GQ+ L + +++E + + D+D+ D II Sbjct: 1 MRVLVTGAKGQLGSDLLCELSKRNIESVGIDIEDLDITDAAATKKLIEDINNKTKLDAII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAVD AED + INAEG IA+ A ++ I +YISTDYVFDG + P + Sbjct: 61 HCAAYTAVDAAEDNEALVTKINAEGTKNIAEVAKTLDIAMMYISTDYVFDGEGKRPWEPD 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YG +K GE V Y I+R +WV+ + G+NF+ +MLRL KER +SVV Sbjct: 121 DKRAPLNVYGMAKYKGELYVEELVKKYFIVRISWVFGLHGNNFIKTMLRLGKERGAVSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT ++R + + T G +H T + G SW DFA IF ++ Sbjct: 181 NDQIGSPTYTPDLSRLLADMIV-------TDKYGRYHATNE-GLCSWYDFAVEIFKQAK- 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +P KA RP S +D SKL + TW++ + L+ + Sbjct: 232 ---LDVAVTPVSSDAFPVKAKRPHNSRMDKSKLTENGFKLLPTWQDALGRYLLEL 283 >gi|320325877|gb|EFW81937.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. B076] gi|320330328|gb|EFW86311.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 301 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 114/300 (38%), Positives = 166/300 (55%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVAVLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I H + + D++ G++H+ A G SW FA ++ + Sbjct: 181 ADQYGAPTGAELIADVTAHILHRVSGDQDSATLAGVYHLAA-AGETSWHGFARFVLEHAE 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G K+ I T+ YP A RP S L KL T +++ W++G + +L I Sbjct: 240 RNGVQLKVSSDKIGAIPTEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDEI 299 >gi|53804350|ref|YP_113747.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str. Bath] gi|53758111|gb|AAU92402.1| dTDP-4-dehydrorhamnose reductase [Methylococcus capsulatus str. Bath] Length = 301 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 118/299 (39%), Positives = 165/299 (55%), Gaps = 10/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR---PDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV+G +GQ+A L E++ + R P IDL +P A+ + PD+I+N Sbjct: 1 MKILVVGRSGQLAWELRRTLACFGEVVALDRQSEPAIDLAEPGAVAALVRAVRPDLIVNA 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE EP++A+ +NAE +A A +GI I+ STDYVF G P E P Sbjct: 61 AAYTAVDRAEQEPDLAWKVNAEAPAVLAAEATRLGIGLIHYSTDYVFPGDGAVPYREDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N+YG+SKLAGE+ +A+ ++ILRTAWVY + G NFL +MLRL ER + V+ D Sbjct: 121 VGPRNVYGRSKLAGEQAIAASGAAHLILRTAWVYGVRGQNFLRTMLRLMAEREVVRVIDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTS---LRGIFHMTADGGPVSWADFAEYIFWESA 234 QFG PT IA A + + + + G++H+T G SW FA I + Sbjct: 181 QFGAPTWVRMIAEATAILVASSLRSGTADLAGASGVYHLTC-SGQTSWYGFACAIREHAV 239 Query: 235 ERGGPY---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V I T +YPT A RPA+S LD KL I + W + + L ++ Sbjct: 240 AAGLLPDTAARVEAIPTSEYPTPAKRPAHSVLDLGKLEARFGIVLPVWDQALELCLADL 298 >gi|242240690|ref|YP_002988871.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech703] gi|242132747|gb|ACS87049.1| dTDP-4-dehydrorhamnose reductase [Dickeya dadantii Ech703] Length = 290 Score = 330 bits (848), Expect = 1e-88, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 168/288 (58%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+ Q L S E++ GR +D+ +F+PD IIN AAY Sbjct: 1 MRILITGSQGQLGQHLVSYLNGKAELLATGRDSLDITNKNQVIDKVKTFNPDYIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AED+ E ++IN +G +A+AA+ ++ISTDYVFDG + P E PT+P Sbjct: 61 TAVDNAEDDSERCYAINRDGPAHLAEAANIANAVLLHISTDYVFDGRAEQPYTEDMPTHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKLAGE+ VA ++I+RT+WV+ +G+NF+ ++LRLA R +++V DQFG Sbjct: 121 LNVYGASKLAGEQAVAEIARKFLIIRTSWVFGEYGNNFVKAILRLAATRNMLNIVNDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + IA +I++ H IE +T GI+H + VSW +FA I ++ Sbjct: 181 GPTYSGDIANTLIELIH-YIEQGNTPAWGIYHYSG-TPAVSWFEFAGAILEQAKAHNLLE 238 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + K+ I + YPTKA RPA S L+C ++ + S W + +I Sbjct: 239 AYPKLSGIPSVDYPTKAKRPANSVLNCDRITKQFGLAPSQWLSAINDI 286 >gi|237711070|ref|ZP_04541551.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA] gi|229454914|gb|EEO60635.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 9_1_42FAA] Length = 287 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 157/292 (53%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ + + Q+ I ++D+ +I+N A Sbjct: 1 MNVLVTGANGQLGNEM-RLMAQNSSHHYIFTDVEELDITDFNAILQTVKEKEIQIIVNCA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VDKAE++ +IA ++N G +A A + I+ISTDYVF+G + P E T Sbjct: 60 AYTNVDKAENDFDIANALNNIAVGRLANVAKAQNATLIHISTDYVFNGNNHIPYTEDDIT 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P+ +YGK+KLAGEE + NY+ILRTAW+YS +G+NF+ +M +L E+ +SV+ DQ Sbjct: 120 DPIGVYGKTKLAGEETIKKVGCNYIILRTAWLYSKWGNNFVKTMQKLTLEKDILSVIFDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A AI I + N GI+H + + G SW DFA+ I S G Sbjct: 180 IGSPTYAKDLAHAISLIIERNMLNQQ----GIYHYSNE-GVCSWFDFAKEICELS----G 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I ++ YP+K RP YS LD +K T I + WK+ ++ + + Sbjct: 231 HNCNITPIHSQDYPSKVTRPHYSVLDKTKFKETFGIPVPYWKDSLKKCINEL 282 >gi|281420693|ref|ZP_06251692.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205] gi|281405466|gb|EFB36146.1| dTDP-4-dehydrorhamnose reductase [Prevotella copri DSM 18205] Length = 290 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 16/296 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVI 54 M LV G NGQ+ + +C Q + + + + +D+ VI Sbjct: 1 MNILVTGANGQLGHEMQ-ICAQKSNHKFVFTDVAEGYEKLDITNLDAIREKVSENDIQVI 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYT VDKAE + ++A +N AG +A+A + I++STDYVF G P E Sbjct: 60 VNCAAYTNVDKAETDYDLANLLNNTAAGNLAQAMKEVDGTLIHVSTDYVFQGDKNIPCRE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNPL +YGK+KLAGE+ + + ++I+RTAW+YS +G NF+ +M L + V Sbjct: 120 DWETNPLGVYGKTKLAGEKSIEATGCKHIIIRTAWLYSQWGKNFVKTMQSLTASHDTLKV 179 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I IE GI+H + + G SW DFA+ I S Sbjct: 180 VFDQVGTPTYAGDLAAVISHI----IETDQLDKTGIYHFSNE-GICSWFDFAKIICELS- 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +++++P+ RP +S LD SKL T ++ W + ++ + + Sbjct: 234 ---GNTCDIQPCYSEEFPSPVKRPHFSVLDKSKLKQTFGFKVPYWTDSLKKCIAEL 286 >gi|329848962|ref|ZP_08263990.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19] gi|328844025|gb|EGF93594.1| dTDP-4-dehydrorhamnose reductase [Asticcacaulis biprosthecum C19] Length = 293 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 135/291 (46%), Positives = 189/291 (64%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G GQ+ S+ ++ Q +E+IR+G PDIDL +P + + SPDVII+ AA Sbjct: 1 MRVLITGTEGQVDTSVKALGEQLGIEVIRIGLPDIDLSRPDSLEAPVRAASPDVIISSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A IN + G +A+ A S+ +P +++STDYVF G DE Sbjct: 61 YTAVDKAESEPDLARRINGDAPGELARIAASLNVPLLHLSTDYVFPGDKDGVYDEADTPE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KLAGE ++A+ T+N+VILRTAWVYS +G+NF+ +MLRL K R EI+VV DQ Sbjct: 121 PASVYGATKLAGERQIAANTDNFVILRTAWVYSPYGNNFVKTMLRLGKTRDEINVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +IARA++ +A + + D LRGIFH+T G +WADFAE IF ES +RGG Sbjct: 181 GCPTYAPEIARALLTVAQKIAADPDPKLRGIFHLTG-TGETTWADFAETIFLESVKRGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T YPT A RPA S L +KL + + +++ W + + + Sbjct: 240 AVKVNPIATSDYPTPAKRPANSRLSGAKLHSIYGLQLDPWPVSLSYCMDAL 290 >gi|227891401|ref|ZP_04009206.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] gi|227866790|gb|EEJ74211.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] Length = 278 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 154/293 (52%), Gaps = 19/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q + + + E + +D+ + ++F P+V+ + AA Sbjct: 1 MKILITGANGQLGQEMQHLLDGRGQEYLAEDSQGLDITDKEAVDAYFEKNKPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSP 117 YTAVDKAE E E+ + +N +G IAKA +G +Y+STDYVFDG + P Sbjct: 61 YTAVDKAEGEGKELNWKVNVDGTENIAKACQKVGATLLYVSTDYVFDGNRTSGEYLPDDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P N YGK+KLAGEE V Y + Y I+RTAWVY +G NF+ +ML LAK +++VV D Sbjct: 121 KGPRNEYGKAKLAGEEAVQKYCDKYYIIRTAWVYGQWGHNFVYTMLNLAKNHDKLTVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT +A + + N +E G++H D G SW +FA+ I ++ Sbjct: 181 QVGRPTWTRTLAEFLTYLVDNKVE------YGVYHCCND-GQCSWYEFAKEILKDT---- 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + QYPT A RP YS + KLA S WKE + L + Sbjct: 230 --DVDVQPVTSDQYPTAAFRPHYSVM---KLAKETGFVFSDWKEALDEFLSEV 277 >gi|237748595|ref|ZP_04579075.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes OXCC13] gi|229379957|gb|EEO30048.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes OXCC13] Length = 278 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 120/287 (41%), Positives = 162/287 (56%), Gaps = 15/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G GQ+ L + I V R ++D+ D F S D IIN AAYTAV Sbjct: 3 LVTGAGGQLGMELRVLLKDSA--IYVDRNELDISSETDVRRFLQQNSFDCIINCAAYTAV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 DKAEDEP +A ++N GA +A G I+ISTDYVFDG P E PT P+++ Sbjct: 61 DKAEDEPVLADAVNHLGAKWLA----KYGRTIIHISTDYVFDGAHSKPYLEDDPTYPVSV 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE+ V + VI+RTAW+YS GSNFL +MLRL +ER ++VV DQ GTPT Sbjct: 117 YGQSKLRGEQAVLNNAETAVIIRTAWLYSAHGSNFLKTMLRLGRERDHLNVVSDQVGTPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +A+AI++I + I+H T + G SW DFA I + G KV Sbjct: 177 FAGDLAKAIVRILPKVKAGKKN----IYHFTNE-GVCSWYDFAHAIMKIA----GLSCKV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I +K YPTKA RP YS L+ K+ + + I W++ + +L ++ Sbjct: 228 HPIESKNYPTKATRPFYSVLNKEKIKSDFKLEIPHWRDALIEVLNDM 274 >gi|269102101|ref|ZP_06154798.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp. damselae CIP 102761] gi|268161999|gb|EEZ40495.1| dTDP-4-dehydrorhamnose reductase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 115/293 (39%), Positives = 166/293 (56%), Gaps = 8/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L + EI+ V R ++D+ D F P +IIN A Sbjct: 1 MKVLITGCNGQVGSCLVEQLQTFPNTEILAVDRNELDITSQYDVIKSVNEFKPHIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE E +++++IN +G +A+AA+++G ++ISTDYVF G E Sbjct: 61 AHTAVDKAETEVDLSYAINRDGPLYLAQAAENVGATLLHISTDYVFSGDKDGMYIETDTV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YGKSKLAGE V + +ILRTAWV+ G+NF+ +MLRLA++R E+ +V DQ Sbjct: 121 DPQGVYGKSKLAGENAVLDNCSRSIILRTAWVFGEEGNNFVKTMLRLAQQRDELGIVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENS---DTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 FG PT A IA A+I IA +I + S GI+H + SW FA+ IF ++ E Sbjct: 181 FGGPTYARDIATALISIARTIIAEGSNFELSKYGIYHYSG-LPHTSWYGFAQTIFDKAVE 239 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + V I T+ Y T A RPA S L+ K+ T +I+ S W+ + + Sbjct: 240 QKVLNKAPIVNGIKTEDYLTPAKRPANSKLNIQKITETFDIQASDWQCALNQL 292 >gi|221214409|ref|ZP_03587380.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221165666|gb|EED98141.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 303 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 146/292 (50%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTA Sbjct: 9 ILLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +A +NAE +A+ A IG I+ STDYVF G P E P +P N Sbjct: 69 VDQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKEGPYVEDDPVDPQN 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E++VV DQ G P Sbjct: 129 VYGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELNVVADQIGAP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T + IA + I GI+H+ A G SW FAE IF + Sbjct: 189 TWSNTIATLTAHVVAQAISAPMRDEWWHAHSGIYHLCA-AGSTSWHGFAEAIFRLADLPK 247 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P V I YPT A RPA S + +KLA + W+ + ++ Sbjct: 248 KPA--VMPIPASAYPTPAKRPANSQMSNAKLAEHFGLHAPHWEAALALCMMQ 297 >gi|296447933|ref|ZP_06889842.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b] gi|296254570|gb|EFH01688.1| dTDP-4-dehydrorhamnose reductase [Methylosinus trichosporium OB3b] Length = 300 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 135/289 (46%), Positives = 174/289 (60%), Gaps = 1/289 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + V G GQ+ SL EI+ +GRP +DL+ S D I+ AAYT Sbjct: 4 RIAVTGAQGQVVTSLLERASSTAEIVALGRPKLDLMDRDSVLSALRDSRCDAIVGAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDK+E EPEIA +N GAG +A+AA +G+P ++ISTDYVFDG + P E PT PL Sbjct: 64 AVDKSEQEPEIAMRVNGAGAGFVAEAAAELGVPLVHISTDYVFDGTAARPYREDDPTAPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKL GE +V + ILRTAWVYS FG+NF+ +MLRL + R E+ VV DQ G Sbjct: 124 GVYGASKLEGETRVLAACPGATILRTAWVYSPFGANFVRTMLRLGETREEVGVVADQLGN 183 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSAL IA A + + L +++D +LRG+FHMT G SWAD AE IF +AE G Sbjct: 184 PTSALDIADATLAVVTRLAQDADPALRGVFHMTG-SGEASWADVAEAIFARAAEHGRAPV 242 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V RI T YPT A RPA S LD SKLA H + + W+ + + + Sbjct: 243 RVRRITTADYPTPAKRPANSRLDNSKLARLHGVALPDWRASLAACVDRL 291 >gi|160914758|ref|ZP_02076972.1| hypothetical protein EUBDOL_00765 [Eubacterium dolichum DSM 3991] gi|158433298|gb|EDP11587.1| hypothetical protein EUBDOL_00765 [Eubacterium dolichum DSM 3991] Length = 281 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + VE + V ++D+ K D +++ AA Sbjct: 1 MKLLVTGVKGQLGYDVVKEAEKRGVEAVGVDIDEMDITDAKQVREVITKGGYDAVVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAED E +N EG IA+ + + IP +Y STDYVF+G P E+ Sbjct: 61 WTAVDKAEDMEEACRKVNKEGTENIAQVCEVLDIPIMYFSTDYVFNGQGSEPWKEYDKRA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE V + I+R AWV+ G+NF+ +MLRL KER +SVV DQ Sbjct: 121 PLNVYGQTKYEGELAVEKLA-KHFIIRIAWVFGKNGNNFIKTMLRLGKERGAMSVVNDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ ++ + + G +H T + G SW +FA IF ++ G Sbjct: 180 GSPTYTYDLAKLVLDMIQ-------SDKYGTYHATNE-GICSWYEFACEIFKQA----GM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + ++PTKA RP S ++ ++L R+ TW++ + L + Sbjct: 228 NVQVTPVSSDEFPTKAKRPCNSRMNKTELDRNGFDRLPTWQDALHRYLKEL 278 >gi|319424480|gb|ADV52554.1| dTDP-4-dehydrorhamnose reductase [Shewanella putrefaciens 200] Length = 294 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 165/289 (57%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ + L + + + R +D+ + + F PDVIIN AA Sbjct: 5 KVLVTGCNGQVGRCLVTQMQTMSSITLCASERERLDITNREQVYTVVNQFHPDVIINAAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+ ++IN +G +A+AA+ +G ++IS+DYVF G E + Sbjct: 65 YTAVDKAEQEIELCYAINRDGPKYLAEAANQVGALILHISSDYVFSGRKHGLYTEDDIPD 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKLAGE +VA+ ++ILRTAWV+ G NF+ +ML L + E+ VV DQF Sbjct: 125 PLGVYGQSKLAGEIEVANLCPRHIILRTAWVFGEHGKNFVNTMLGLTQTHDELGVVADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PT A IA ++I I I + + GI+H + + VSW FAEYIF ++ + G Sbjct: 185 GGPTYAADIAASLITIT-KAIRLKNGANFGIYHYSGE-PHVSWHQFAEYIFEQAFDVGLI 242 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT+A RPA S LDC K+ I S W+ ++N+ Sbjct: 243 NKEIRVNAITTTDYPTQATRPANSKLDCRKIMKQFGIAPSDWQAALKNL 291 >gi|237745880|ref|ZP_04576360.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS] gi|229377231|gb|EEO27322.1| dTDP-4-dehydrorhamnose reductase [Oxalobacter formigenes HOxBLS] Length = 279 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 111/287 (38%), Positives = 162/287 (56%), Gaps = 15/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G NGQ+ L ++ + + R +D+ ++ + D IIN AAYTAV Sbjct: 3 LVTGANGQLGSELRNLL--GASAVYIDRETLDISDEAAVRNYLKNNCFDCIINCAAYTAV 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AEDEP A ++N G+ +A G I+ISTDYVFDG S P E TNPL+I Sbjct: 61 DRAEDEPVQANAVNHLGSLWLA----KYGKRIIHISTDYVFDGTSHVPYHEEDKTNPLSI 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGK+KLAGE+ V Y V+LRTAWVYS +G+NF+ ++LR+ + R + VV DQ G+PT Sbjct: 117 YGKTKLAGEKAVLDYAETAVVLRTAWVYSPYGNNFVKNILRMGRTRESLRVVSDQIGSPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 SA +A++II+I + T + ++H T + G SW D A + + G + V Sbjct: 177 SAGDLAKSIIEILQQM----KTGKKDVYHFTNE-GVCSWYDLAVAVMDLA----GLSTPV 227 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 I ++ +PTKA RP YS L K+ + + I W+E + ++ I Sbjct: 228 IPIESRDFPTKAVRPFYSVLSKRKIKTHYGLGIRHWREALGEVIKKI 274 >gi|229008637|ref|ZP_04166049.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock1-4] gi|228752642|gb|EEM02258.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock1-4] Length = 280 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 159/291 (54%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + R ++D+ S + +PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFVAYFTEKGDTLYSFTRNELDITDATSVFSTIKNLNPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE+ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEENWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMQMRDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V S+ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVKSFHSRYFIMRTSWLYGGEGPNFVRTMQTLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ T+ G +H++ + G SW +FA IF E G Sbjct: 181 GCPTYTKDLVCKTGEMIQ-------TNQYGTYHVS-NRGECSWFEFATRIFQEM----GA 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T++Y KA RP YS L L + W+E +R ++ I Sbjct: 229 DVKVIPVKTEEYGVKAERPRYSVLQHLCLELNGFAPMRQWEEALREYIIEI 279 >gi|167038026|ref|YP_001665604.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116439|ref|YP_004186598.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856860|gb|ABY95268.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929530|gb|ADV80215.1| dTDP-4-dehydrorhamnose reductase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 297 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIA---QSLSSMCV----------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ +S+ ++ EII V +D+ KD + Sbjct: 1 MKLLITGAKGQLGLQIRSIIERGKSEIGEIDEIYKNAEIIYVSHDKLDITVLKDVLEYIE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + PD+IIN AAYT VD+ E + + AF +NA G +A AA +G +++STDYVF G Sbjct: 61 KYRPDIIINCAAYTNVDRCESDIDTAFKVNAIGPRNLAIAAQKVGAKLLHVSTDYVFSGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ P+++YGK+KL GE+ V + + Y I+RTAW+Y +G NF+ ++L AK Sbjct: 121 GSVPFREYDIPQPISVYGKTKLLGEQYVREFCDKYFIVRTAWLYGKYGKNFVYTILNTAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 181 EKGYLEVVNDQRGNPTNAEDLAYHILKLVL-------TDEYGIYHCTGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V I + + A RP YS LD L T R+ W++ ++ + Sbjct: 233 KIVEYA----GINCTVVPITSDKINRAAKRPFYSSLDNMMLRCTIGDRMRNWEDALKVFI 288 Query: 288 VNI 290 ++ Sbjct: 289 DDV 291 >gi|327188679|gb|EGE55882.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli CNPAF512] Length = 295 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 151/291 (51%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQI QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQIVQSLLRRGAETGVEIIAVGRPEMDLSDPASVAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE E E+AFS+NA GAGAIA+AA IG+P I++STDYVF G + E T Sbjct: 61 YTGVDKAESEAELAFSVNAAGAGAIAEAAARIGVPVIHLSTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADAILAIATRIVADPAPSLRGTFHLTG-SGEASWADFAEAIFAALLKSGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLATTYGIRLPEWKQSMTIVMQDL 290 >gi|253996730|ref|YP_003048794.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8] gi|253983409|gb|ACT48267.1| dTDP-4-dehydrorhamnose reductase [Methylotenera mobilis JLW8] Length = 319 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 115/302 (38%), Positives = 169/302 (55%), Gaps = 18/302 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K L+ G NGQ+ +L E++ + R +DL P+ + PD+IINP Sbjct: 20 KILLTGVNGQVGHALQLALANQSGLFAELVCLDRSQLDLSNPQAIRDVVQAIQPDLIINP 79 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE EP++A++INA G +A+ A +G I+ STDYV+ G E Sbjct: 80 AAYTAVDKAESEPDLAYAINATAPGVLAEEAAKLGAKFIHFSTDYVYAGNKIGVYVEDDA 139 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T PL+IYGKSKLAGEE V + +I RT+WVY +G NFL ++LRLAKER ++ +V D Sbjct: 140 TAPLSIYGKSKLAGEEAVRAVGLPSLIFRTSWVYGAYGKNFLHTILRLAKEREQLRIVAD 199 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS+ IA+A++++ D G++H+ + G +W FA I A+ Sbjct: 200 QIGAPTSSHSIAQAVVEVLARW----DGEHSGVYHLV-NAGRTTWHGFATAIVDAYAQLQ 254 Query: 238 ---------GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + I T YPT A RPA SCLDC+KL++ ++++ W++ + L Sbjct: 255 PARDWPMLKAKVANIGPITTADYPTPAARPANSCLDCTKLSSDFSVQLPDWRDALMAELE 314 Query: 289 NI 290 + Sbjct: 315 AL 316 >gi|258517198|ref|YP_003193420.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] gi|257780903|gb|ACV64797.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] Length = 461 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 151/290 (52%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + + +E I V R D D+ + ++ PDV+I+ AAY Sbjct: 184 KVLVTGVEGQLGYDVVKRLNLLGIENIGVDRTDFDITDKEQTEAYIFDCKPDVVIHCAAY 243 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E + ++IN +G I++A I +YISTDYVFDG E PT P Sbjct: 244 TAVDKAEEEQGLCYAINVDGTRYISEACKKIDAKMLYISTDYVFDGEGTEAQKEDKPTAP 303 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK GE V Y I+RT+WVY G+NF+ +ML+L + + EISVV DQ G Sbjct: 304 ANYYGYSKEQGELLVKELLEKYFIIRTSWVYGKNGNNFVKTMLKLGQTKDEISVVNDQVG 363 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I + T+ G +H+ + G SW +F IF ++ G Sbjct: 364 VPTYTPDLAVSICDMLQ-------TTKYGTYHVVNE-GYCSWYEFVVEIFKQA----GIN 411 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T +YPT+A RP S L KL R+ WK+ ++ L + Sbjct: 412 IKVNSIPTSEYPTRAKRPLNSRLSKEKLDKNGFNRLPEWKDALKRYLDEL 461 >gi|221201087|ref|ZP_03574127.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221206461|ref|ZP_03579474.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221173770|gb|EEE06204.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221178937|gb|EEE11344.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 300 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 147/294 (50%), Gaps = 10/294 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTA Sbjct: 9 ILLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +A +NAE +A+ A IG I+ STDYVF G P E +P N Sbjct: 69 VDQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKAGPYVEDDAVDPQN 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E+ VV DQ G P Sbjct: 129 VYGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELKVVADQIGAP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-------GIFHMTADGGPVSWADFAEYIFWESAE 235 T + IA I SD GI+H+ A G SW FAE IF S Sbjct: 189 TWSNTIATLTAHILAQAAGVSDADRHAWWRERSGIYHLCA-SGSTSWHGFAEAIFDSS-- 245 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 R KV I YPT A RPA S + +KL+ T I W + +R + Sbjct: 246 RLVRKPKVKPIPASAYPTPAARPANSRMSGAKLSRTFGICAPDWHDALRMCMAE 299 >gi|307825028|ref|ZP_07655250.1| dTDP-4-dehydrorhamnose reductase [Methylobacter tundripaludum SV96] gi|307734075|gb|EFO04930.1| dTDP-4-dehydrorhamnose reductase [Methylobacter tundripaludum SV96] Length = 300 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 103/297 (34%), Positives = 155/297 (52%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRPDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G GQ+ L E++ + + D P+ A + +PD+I+N Sbjct: 1 MKILLFGKGGQVGWELQRSLAPLGELVALGTDSQTLCGDFTNPEGIAQVVRAVAPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E+ +INA +A+ A G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESELELCRTINATTPCVLAQEAKRSGAWLVHYSTDYVFDGSGDKPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YGK+KL GEE + + ++I RT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 121 ATGPLSVYGKTKLEGEEAIRATGCQHLIFRTSWVYAARGGNFAKTMLRLARERDSLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + ++ D S G++H+ + GG SW D+A ++ + + Sbjct: 181 DQIGAPTGADLLADVTAHAIRSALQRPDVS--GLYHLVS-GGQTSWYDYAGFVIESARQA 237 Query: 237 GGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + T +P A RP S LD KL NT + + W G+ +L Sbjct: 238 GIDIKVAPEAIQPVPTSAFPLPAPRPKNSRLDTRKLQNTFGLNLPHWHSGITRMLTE 294 >gi|119947065|ref|YP_944745.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] gi|119865669|gb|ABM05146.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] Length = 294 Score = 329 bits (845), Expect = 2e-88, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 163/290 (56%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G+ GQ+ L+ D + + + +D+ + F P +IIN A Sbjct: 1 MRVLITGSKGQVGHCLTEQLRNYTDAQFLALDSKGLDITDQSAVQAVVNEFKPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDE ++A++IN +GA +A+AA S+ ++ISTDYVF G E T Sbjct: 61 AYTAVDRAEDESDLAYAINRDGAKYLAEAAQSVNAVILHISTDYVFSGDKEGMYTEADLT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P IYG+SKLAGE+ V + ++ILRTAWV+ G+NF+ MLRLAK + +V DQ Sbjct: 121 SPQGIYGESKLAGEKAVIEACSRHIILRTAWVFGEHGNNFVKIMLRLAKTHDTLGIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A++ +A L N D GI+H + VSW+ FA+ IF E+ ++ Sbjct: 181 FGGPTYAGDIASALVTVAKTL-SNGDNDKYGIYHYSG-FPHVSWSQFAQAIFDEAVQQTV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA S L + + + + S WK ++NI Sbjct: 239 LKQSPVVNSITTADYPTPAKRPANSKLSTTLIKDKFGVNASDWKAALQNI 288 >gi|29726016|gb|AAO88943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 295 Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats. Identities = 121/291 (41%), Positives = 171/291 (58%), Gaps = 7/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G+ GQ+ L ++VE + V R +D+ P + F P++IIN A Sbjct: 2 MRVLVTGSRGQVGHCLVQQLSTMKEVEFLAVDRDQLDITYPAQVDAVVNEFKPNIIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA +G ++ISTDYVF G P E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPHYLAQAAQKVGAAILHISTDYVFSGDKPNPYLEADPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER-REISVVCD 177 PL +YG+SKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA + E+S+V D Sbjct: 122 APLGVYGESKLAGEIAVAQACPRHIILRTAWVFGEHGNNFVKTMLRLAADTCHELSIVGD 181 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QFG PT A IA A+ IA I D+ GI+H + VSW FA+ IF + E+G Sbjct: 182 QFGGPTYAGDIASALATIARK-ISKGDSIEYGIYHYSG-TPHVSWCQFADAIFDLAVEQG 239 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 SK + + T+QYPT A RPA S + K+ N I+ S W +++I Sbjct: 240 VLSSKPIIKSVTTEQYPTLAKRPANSKMSNKKIENKLGIKGSDWHAALKDI 290 >gi|260174675|ref|ZP_05761087.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|315922938|ref|ZP_07919178.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|313696813|gb|EFS33648.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 288 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 147/291 (50%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNQYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAVVAKETDATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + +Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQEIGCHYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA+ I S G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAKEICDLS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ + I + WK+ ++ + + Sbjct: 232 VCDIQPCHSDEFPSKVKRPHFSVLDKTKVKSAFGITVPYWKDSLQKCINEL 282 >gi|92118530|ref|YP_578259.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] gi|91801424|gb|ABE63799.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] Length = 307 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 130/287 (45%), Positives = 176/287 (61%), Gaps = 3/287 (1%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV+G +GQ+A+ L +++ ++ VGRP++DL + D A + SP IIN AAYT Sbjct: 12 VLVVGKSGQLARCLQEAAIRRNLALVSVGRPELDLERGDDLAETVTAMSPAAIINAAAYT 71 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EP+ A+ +N + AG +A A GIP I++STDYVFDG +P E T PL Sbjct: 72 AVDRAEAEPKRAYRVNRDAAGRMAAVAREQGIPFIHVSTDYVFDGRKHSPYREDDQTGPL 131 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKL GE V ++LRTAWVYS +G NF+ ++LRL+ + + VV DQ+G+ Sbjct: 132 NVYGRSKLEGEAAVLKVDPGAIVLRTAWVYSPYGQNFVRTILRLSATQPAVLVVSDQYGS 191 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSAL +A AI+ I H + S+ GI+H+TA G VSW DFA IF + A RG P Sbjct: 192 PTSALDLAEAILTIVHQARADHG-SVGGIYHLTAQ-GDVSWHDFATAIFEQLARRGLPVP 249 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + I T YPT A RPA S LDCSK A +R+ W + L Sbjct: 250 DLQAIITDDYPTPARRPANSRLDCSKAAQVFGVRLPHWHSSLEECLA 296 >gi|226726329|gb|ACO81753.1| RfbD [Herbaspirillum seropedicae SmR1] Length = 471 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 164/293 (55%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G +GQ+ Q L M + E++ ++DL + SF P +I+N AAY Sbjct: 1 MRILLTGASGQLGQVLQPMLARHGELLAPSSRELDLADRQALQSFLQQARPGLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A ++NA +A+ A +G P ++ STDYVFDG S P E PT P Sbjct: 61 TAVDKAESDVARAEAVNALAPMILAQQAQMLGAPLVHFSTDYVFDGKSARPYVETDPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG++KLAGE+ +A++ + Y ILRT+WVY +GSNFL +M RLA ER ++VV DQ G Sbjct: 121 LNVYGRTKLAGEQGIAAHCDAYWILRTSWVYGCYGSNFLKTMWRLAGEREYLTVVDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 PT IA + ++ + + + G++H++A GG SW FA+ I +G Sbjct: 181 APTWTHTIADTLARMLAHGADAQQSVRDTTGLYHLSA-GGATSWHGFAQRILQLLRAQGE 239 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I + YP A RP S LD L T ++ + TW+E + L Sbjct: 240 TALLDPALVRPIASDAYPAIAQRPRNSRLDTGLLRRTFSLSLPTWEEALERCL 292 >gi|91776363|ref|YP_546119.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT] gi|91710350|gb|ABE50278.1| dTDP-4-dehydrorhamnose reductase [Methylobacillus flagellatus KT] Length = 306 Score = 329 bits (844), Expect = 3e-88, Method: Composition-based stats. Identities = 117/298 (39%), Positives = 164/298 (55%), Gaps = 14/298 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G NGQ+ +L E++ + R +DL KP PD+IINPAAYT Sbjct: 6 KILLTGINGQVGHALYPKLQSLGEVVALDRSQLDLSKPDHIRDVVRQTKPDLIINPAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A++IN G +A+ A + ++ STDYVFDG TP E TNPL Sbjct: 66 AVDKAESEPELAYAINGTAPGILAEEAAKLNALLVHYSTDYVFDGTKTTPYTELDETNPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SKLAGE+ + N++I RT+WVY +G NF+ ++LRLA ER +++V DQFG Sbjct: 126 SVYGASKLAGEKAIQEVGANHLIFRTSWVYGAYGKNFMRTILRLAAERDSLNIVADQFGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PTS IA A I H D + RG++H+ + G SW FA I + E Sbjct: 186 PTSTESIADATITALHAW----DGTQRGVYHLV-NTGETSWHGFALEIIRQYGEIAQKKN 240 Query: 241 --------SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +YPT AHRPA S + K +T ++ W+ +R+ + ++ Sbjct: 241 LAKLKSTVENVVGITTAEYPTPAHRPANSKMSTEKFMSTFKTELAPWELALRSTVTHL 298 >gi|325497858|gb|EGC95717.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia fergusonii ECD227] Length = 299 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYATLVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|217421054|ref|ZP_03452559.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 576] gi|217396466|gb|EEC36483.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 576] Length = 300 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 152/292 (52%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L+ ++ + R +DL P + P +I+NPAAYT Sbjct: 10 RILVTGVNGQVGFELARTLQGLGTVVALDRGALDLADPDRIRAVMREIRPTLIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++A +IN G +A+ A +G P I+ STDYVFDG+ E PT P Sbjct: 70 AVDKAERERDLAIAINGVAPGVLAEEAKRLGAPLIHYSTDYVFDGMKDGEYTETDPTCPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE +A+ ++I RT+WVY G NF+L+MLRL ER E+ VV DQ G Sbjct: 130 NVYGESKLAGEVAIAASGAAHLIFRTSWVYGARGRNFMLTMLRLGNERSELKVVSDQIGA 189 Query: 182 PTSALQIARAIIQIAHNL-----IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 PT + IA + + + G++H++A G SW FA IF + Sbjct: 190 PTWSNTIATLTSHVVAQANSVQDVTQWWSERSGVYHLSA-SGATSWHGFASAIFELAG-- 246 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G V I T +YP A RPA S + KL +R WKE + L Sbjct: 247 GETRPIVLPISTAEYPVPATRPANSRMSGDKLQEVFGLRAPDWKEALGLCLA 298 >gi|313203691|ref|YP_004042348.1| dtdp-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] gi|312443007|gb|ADQ79363.1| dTDP-4-dehydrorhamnose reductase [Paludibacter propionicigenes WB4] Length = 286 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 161/288 (55%), Gaps = 12/288 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G++GQ+ + + I ++D+ +F + + +VI+N AAY Sbjct: 4 ILITGSHGQLGNEMQQAAARFPAFRFIYTDVEELDICDKAALDAFVKANAVNVIVNCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ E+ + INAE I + A G+ +++STDYVFDG + P E +P Sbjct: 64 TAVDKAEDDVELCYKINAEAVRNIGEVAHQNGLKVVHVSTDYVFDGTNYMPYSEDQAVSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE+ + VILRTAW+YS FG+NF+ +M++L ER ++V+ DQ G Sbjct: 124 NTVYGKSKLAGEQALMETCEQAVILRTAWLYSSFGNNFVKTMIKLGTERDSLNVIFDQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A AI+++ + + + GI+H + D G SW DF + I + G Sbjct: 184 SPTYAADLADAILKLLSHPV-----FVPGIYHFS-DEGVCSWYDFTKTIHRIA----GIT 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V+ I TK YP + RP YS L+ SK+ T+ I I W+E + + Sbjct: 234 CDVHPIETKDYPARTPRPHYSVLNKSKIKTTYGIVIPHWEESLERCMK 281 >gi|78186306|ref|YP_374349.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273] gi|78166208|gb|ABB23306.1| dTDP-4-dehydrorhamnose reductase [Chlorobium luteolum DSM 273] Length = 288 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 166/292 (56%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G GQ+ L ++ + + RPD+D+ F F PDV++N A Sbjct: 1 MNILVAGGRGQLGSELQALRKGAGAHRFLFLDRPDLDITDSGSVRGAFDRFQPDVVVNAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE++ E AF +N +GAG +A + G I++STDYVFDG + P E Sbjct: 61 AYTAVDRAEEDREAAFLVNRDGAGVLAGCSRDAGAFFIHVSTDYVFDGTASRPYREEDMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SK GE VAS ++ I+RT+W+YS +G NF+ +MLRL +ER + VV DQ Sbjct: 121 CPEGVYGRSKFEGERLVASVDPSHAIIRTSWLYSAYGQNFVKTMLRLGRERESLGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ IA L + RG++H + + G SW DFA + E G Sbjct: 181 TGTPTHAADLASAVLHIA--LRHDPAFHYRGVWHYSNE-GVASWYDFAHAVM----EFAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I ++++P A RPAYS LD S + ++RI W++ ++ +L I Sbjct: 234 LPCRVEPITSREFPQVAVRPAYSVLDKSAVKRDWDLRIPYWQDSLKTLLTTI 285 >gi|37522803|ref|NP_926180.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Gloeobacter violaceus PCC 7421] gi|35213805|dbj|BAC91175.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Gloeobacter violaceus PCC 7421] Length = 300 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 154/290 (53%), Gaps = 10/290 (3%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ + L ++ ++ + GR +D+ V+ N AAYT Sbjct: 14 LITGAGGQLGKELCALLEAREEPFVAYGRAQLDIADSGAVRQALEQSGAAVLFNCAAYTR 73 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E A +NA GA +A+A + G +++STDYVFDG + P E +PT PL Sbjct: 74 VDKAESEAEEAHRVNATGARVLAEACSAAGSRLVHVSTDYVFDGSACRPYPEDAPTQPLG 133 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG+SK GE V ++++RTAWVY + G NF+ ++LRLA ER ++ VV DQ G+P Sbjct: 134 IYGQSKRDGEVAVLEGDGEHLVVRTAWVYGVGGPNFVRTILRLAGEREQLRVVADQVGSP 193 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GPY 240 T +A A++ + E GI+H+T + G SW DFA I E+ G Sbjct: 194 TWTFDLAAALVGLTKAQAEG------GIYHVT-NSGVTSWYDFAVAIVEEAQALGRALKL 246 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +YPT A RPAYS L ++ + W++ +R +L + Sbjct: 247 QSVVPITTAEYPTPAARPAYSVLSNTRALRVLGGPLPQWRQSLRRMLQQL 296 >gi|295084058|emb|CBK65581.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 288 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNHYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAVVAKETDATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + +Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQETGCHYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA I S G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAREICDLS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ T I + WK+ ++ + + Sbjct: 232 VCNIQPCHSDEFPSKVKRPHFSVLDKTKVKFTFGITVPYWKDSLQKCINEL 282 >gi|237714663|ref|ZP_04545144.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262406528|ref|ZP_06083077.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|294645677|ref|ZP_06723364.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294806946|ref|ZP_06765769.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|229445432|gb|EEO51223.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262355231|gb|EEZ04322.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|292638956|gb|EFF57287.1| dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294445833|gb|EFG14477.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 288 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + I ++D+ VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRRVSSTSSNHYIFTDVAELDITSRDSIRKMVNDNQIHVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ A +N + +A A I++STDYVF G P E TN Sbjct: 61 YTNVDKAEDDFATADLLNNKAVENLAIVAKEADATLIHVSTDYVFQGDRNVPCREDWETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGK+KLAGE + Y+I RTAW+YS +G NF+ +M +L ++ + VV DQ Sbjct: 121 PLGVYGKTKLAGEHSIQGTGCRYLIFRTAWLYSPYGKNFVKTMRQLTSDKDTLKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I Q+ IE + GI+H + + G SW DFA+ I S G Sbjct: 181 GTPTYAGDLASVIYQV----IEENQLYKEGIYHFSNE-GVCSWYDFAKEICDLS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +K+ +T I + WK+ ++ + + Sbjct: 232 VCDIQPCHSDEFPSKVKRPHFSVLDKTKVKSTFGITVPYWKDSLQKCINEL 282 >gi|255099386|ref|ZP_05328363.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-63q42] gi|255305244|ref|ZP_05349416.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile ATCC 43255] Length = 290 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 114/295 (38%), Positives = 166/295 (56%), Gaps = 21/295 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L + I+ R D+D+ + +F L PD Sbjct: 1 MKILITGSNGQLGKELVNQLEAINQSINQPKYVILATTRSDLDISNQTNVDNFILHNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V++N AAYT VD ED EIA+ INA G +A A++ + I+ISTDYVF+G S+ P Sbjct: 61 VVVNCAAYTKVDACEDNIEIAYKINALGVRNLAIASEKVNAKLIHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + +A+ II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLAKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV I + ++ KA RP YS LD L W+E + L Sbjct: 230 --KLKNIDIKVNPIKSNEFKCKAPRPLYSVLDNFMLKLIGLNSFRKWEESIEEYL 282 >gi|134300867|ref|YP_001114363.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum reducens MI-1] gi|134053567|gb|ABO51538.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum reducens MI-1] Length = 283 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + ++ +G +++++ + + + +PD II+ AA Sbjct: 1 MKILVTGYTGQLGYDVVQRGLKVGLSLVGLGSENLNIINGETVSHYVKELNPDAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED+ +++N EG +AKAA I +YISTDYVF+G +P E T Sbjct: 61 YTAVDKAEDDKSTCWNVNVEGTKNLAKAAKDIDAKFMYISTDYVFNGEGDSPFKETDETR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ YG +K GEE V + I+R +WV+ I G+NF+ ++LRLA+ R+EI+VV DQ Sbjct: 121 PIGYYGVTKYQGEEIVKQLLERWFIVRVSWVFGINGNNFVKTILRLAETRKEINVVGDQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A+ +I + T GI+H ++ G SWA+FA+ I+ ++ Sbjct: 181 GSPTYTFDLAKLLIDMIQ-------TDKYGIYH-ASNEGFCSWAEFAKEIYRQA----NK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T++YPT+A RP S + KL + + TW+ V L + Sbjct: 229 DVKVNSISTEEYPTRAIRPKNSRMSKQKLRDNGFSLLPTWQNAVERYLNEL 279 >gi|167903952|ref|ZP_02491157.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei NCTC 13177] Length = 298 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 152/292 (52%), Gaps = 8/292 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L+ ++ + R +DL P + P +I+NPAAYT Sbjct: 8 RILVTGVNGQVGFELARTLQGLGTVVALDRGALDLADPDRIRAVMREIRPTLIVNPAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E ++A +IN G +A+ A +G P I+ STDYVFDG+ E PT P Sbjct: 68 AVDKAERERDLAIAINGVAPGVLAEEAKRLGAPLIHYSTDYVFDGMKDGEYTETDPTCPQ 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE +A+ ++I RT+WVY G NF+L+MLRL ER E+ VV DQ G Sbjct: 128 NVYGESKLAGEVAIAASGAAHLIFRTSWVYGARGRNFMLTMLRLGNERSELKVVSDQIGA 187 Query: 182 PTSALQIARAIIQIAHNL-----IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 PT + IA + + + G++H++A G SW FA IF + Sbjct: 188 PTWSNTIATLTSHVVAQANSVQDVTQWWSERSGVYHLSA-SGATSWHGFASAIFELAG-- 244 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G V I T +YP A RPA S + KL +R WKE + L Sbjct: 245 GETRPIVLPISTAEYPVPATRPANSRMSGDKLQEVFGLRAPDWKEALGLCLA 296 >gi|330873322|gb|EGH07471.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 301 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIHTLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G ++ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVALLINGEAPGVLAREAAALGAWLVHYSTDYVFDGSGDSQWQED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ GSNF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGSNFAKTMLRLAAERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I ++ + D +L GI+H+ A G SW FA ++ + Sbjct: 181 SDQYGAPTGAELIADVTAHILRRVLGDQDSAALAGIYHLAA-AGETSWHGFARFVLEHAE 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV I T+ YP A RP S L KL T +++ W++G + +L I Sbjct: 240 RNGVALKVSADKVGAIATEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDEI 299 >gi|93115447|gb|ABE98409.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] gi|203285021|gb|ACH97139.1| RmlD [Escherichia coli] Length = 299 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLKAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|308272532|emb|CBX29136.1| hypothetical protein N47_J01170 [uncultured Desulfobacterium sp.] Length = 294 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 160/290 (55%), Gaps = 4/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+ GQ+ L E I P ID+ D + PD++IN A Sbjct: 1 MKILITGSQGQLGWELLREAKSYGFETIGFDLPQIDITIKPDVEKVINNIRPDIVINAAG 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD+AEDE E+ F+ N G G IA +++ IP I+ISTDYVFDG TP E + Sbjct: 61 YTNVDRAEDEREVCFAANCTGPGNIAAVCNNLDIPMIHISTDYVFDGRKNTPYTEKDIIS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YGK K G+ V+ ++I+RT+W+Y I +NF+ ++LRL KE+ + VV DQ+ Sbjct: 121 PINAYGKCKAEGDNAVSDVLQKHIIIRTSWLYGIHCNNFVKTILRLGKEKEVLEVVSDQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGG 238 G+PT +A A++ I+ + I+N+ + GI++ G +W FAE I E+ + Sbjct: 181 GSPTFVTDLADAVLTISSH-IKNNSGDIWGIYNYCG-AGVTTWHGFAEKIIEEAGKYLDI 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I +K+YP KA RP+YS LDCS + I W+E ++ + Sbjct: 239 KTILVKPITSKEYPAKAGRPSYSALDCSLINRQFGIVSKPWQESLKMAIK 288 >gi|222148464|ref|YP_002549421.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] gi|221735452|gb|ACM36415.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] Length = 301 Score = 328 bits (842), Expect = 5e-88, Method: Composition-based stats. Identities = 142/291 (48%), Positives = 190/291 (65%), Gaps = 3/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ QSL +D++++ +GRP +DL + + PD+II+ AA Sbjct: 6 RYLVTGLAGQVVQSLLEKASDRKDIDLVALGRPQLDLADAATIEAAVRAAKPDLIISAAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + AF++N EG G +A+ A ++ IP I+ISTDYVFDG +P +E P Sbjct: 66 YTAVDQAETDEAAAFAVNGEGPGELARVAKALDIPIIHISTDYVFDGSKASPYNEADPVA 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKL GE +VA+ T+N+ ILRTAWVYS FG NFLL+MLRLA+ R E+ VV DQ Sbjct: 126 PLGVYGRSKLEGERRVAAETDNHAILRTAWVYSPFGKNFLLTMLRLAETRDELGVVADQI 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA A++++A NL+ + LRG FHMT G SWA+FA IF SAE+ GP Sbjct: 186 GNPTSALDIADAVLKVADNLLSSKAADLRGTFHMTG-TGEASWAEFATEIFRLSAEQNGP 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +KV I YPT A RPA S LDC+KLA H I I W+ + ++ + Sbjct: 245 SAKVNPIPASAYPTPAKRPANSRLDCAKLARVHAIDIPDWRVSTQLVIDRL 295 >gi|228996411|ref|ZP_04156053.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock3-17] gi|228763374|gb|EEM12279.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides Rock3-17] Length = 280 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 159/290 (54%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + R R ++D+ S + +PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFVAYFAEKECTVYRFTRKELDITDATSVLSTIKNLNPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEEKWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMQTRDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V ++ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVKNFHSRYFIMRTSWLYGGEGPNFVRTMQMLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ T+ G +H++ + G SW +FA IF E Sbjct: 181 GCPTYTKDLVCKTGEMIQ-------TNQYGTYHVS-NQGECSWFEFATRIFQEMEA---- 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T++Y KA RP YS L L + W+E +R ++ Sbjct: 229 DVKVIPVKTEEYGAKAERPRYSVLQHLCLELNGFAPMRQWEEALREYVIE 278 >gi|330899786|gb|EGH31205.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 301 Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats. Identities = 117/300 (39%), Positives = 169/300 (56%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEEQWQES 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H + + + + GI+H+ A G SW FA+++ +A Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAA 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YP A RP S L SKL +++ +W++G + +L I Sbjct: 240 LNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDEI 299 >gi|197334022|ref|YP_002154930.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11] gi|197315512|gb|ACH64959.1| dTDP-4-dehydrorhamnose reductase [Vibrio fischeri MJ11] Length = 293 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G GQ+ L+ + ++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCYGQVGHCLTEQLADEESTIVLSLDRDQLDITNQDAVNTIVDDFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E ++++ IN +G +A+AA + ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVDLSYVINRDGPSYLAQAAQRVDAAMLHISTDYVFEGNKVGEYQETDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE VA+ + ++ILRTAWV+ G+NF+ +MLRLA R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIAVANACDKHIILRTAWVFGENGNNFVKTMLRLAATRNALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+IQIA I D G++H + VSW +FAE IF + ++ Sbjct: 181 FGGPTYAGDIAHALIQIAKR-ITKGDEVEYGVYHYSG-LPHVSWFEFAEAIFDTAVKQKV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ S L K+ N I+ S W + NI Sbjct: 239 IPNKPSLTSITTDQYPTPAKRPSNSRLSTDKITNNFGIKASDWMAALNNI 288 >gi|121592968|ref|YP_984864.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. JS42] gi|120605048|gb|ABM40788.1| dTDP-4-dehydrorhamnose reductase [Acidovorax sp. JS42] Length = 292 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 158/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L + +G + D +P+ A + P VI+N AA+ Sbjct: 1 MNILLLGKNGQVGWELQRSLSVLGPVTALGHDEADFTQPQAVAQAVRALRPQVIVNAAAH 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +NA G +A+ A+ +G ++ STDYVFDG TP E P Sbjct: 61 TAVDKAESEPERARLLNAATPGVLAQEAERLGALLVHYSTDYVFDGSGDTPWVETDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG +KL GE + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ DQ+G Sbjct: 121 LSVYGATKLEGERLIQQSGCRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVIDDQWG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A L + G++H A G +W +A+Y+ +A+ Sbjct: 181 APTGADLLADVTAHAIRQLQRRPEDG--GLYHCVA-AGETTWHAYAKYVLEHAAQVQAAI 237 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + T +PT A RP S LD ++L +T + + +W++GV +L I Sbjct: 238 EIKAKEIAPVPTSAFPTPAARPHNSRLDTARLRDTFGLTLPSWQQGVARMLTEI 291 >gi|146283606|ref|YP_001173759.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|145571811|gb|ABP80917.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 306 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 165/291 (56%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + L + ++++ R +D+ KP+ A P++IIN AA Sbjct: 1 MRILVCGAGGQVGRELVERASRFGLDVLAPARAQLDIAKPEQVADAMRQ-RPELIINAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E A+++N +G +A+AA G+P +ISTDYVF G + P E T Sbjct: 60 YTHVDNAESHGEQAYAVNRDGPRHLAEAAKHAGVPLFHISTDYVFSGEATRPYTESDETG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGEE + S ++ILRT+WVY + G NF+ +MLRLA++R + VV DQ Sbjct: 120 PTGVYGASKLAGEEAIRSCLPAHLILRTSWVYGVHGHNFVKTMLRLARQRDALGVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW--ESAERG 237 G PT A IA ++++A + ++ + G++H + SW DFA IF E+A Sbjct: 180 GCPTQAGSIASVLLELARRYADGAELAW-GVYHYSG-APACSWYDFAVEIFRQGEAAGLI 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V I T QYPT A RPA+S LDCS+ + W+E + ++L Sbjct: 238 ARQPEVSPIMTAQYPTPARRPAWSVLDCSRFEAAFGLAPHRWQEDLADVLA 288 >gi|253567876|ref|ZP_04845287.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|251841949|gb|EES70029.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 286 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 151/291 (51%), Gaps = 10/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + I ++D+ + + VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRCIAATSLNNYIFTDVAELDITDLDAIRNMIHLDNIKVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ ++A +N + +A AA + I+ISTDYVF G P E TN Sbjct: 61 YTNVDKAEDDYDMADLLNNKAVENLAIAAKEVNATLIHISTDYVFQGDKNMPCGEDCETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL IYGK+K AGE+ + NY+I RTAW+YS FG NF+ +M +L ++ ++ VV DQ Sbjct: 121 PLGIYGKTKRAGEQSIQRVGCNYLIFRTAWLYSQFGKNFVKTMRQLTADKDKLRVVFDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + I + +IE +GI+H + + G SW DFA+ I S G Sbjct: 181 GTPTYAKD----LADIIYRVIEGDQYHKQGIYHFSNE-GVCSWYDFAKEICELS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P+K RP +S LD +KL + I WK+ + + + Sbjct: 232 SCDIQPCHSDEFPSKVKRPHFSVLDKTKLKLAFGVEIPYWKDSLVKCINEL 282 >gi|152993301|ref|YP_001359022.1| dTDP-4-dehydrorhamnose reductase [Sulfurovum sp. NBC37-1] gi|151425162|dbj|BAF72665.1| dTDP-4-dehydrorhamnose reductase [Sulfurovum sp. NBC37-1] Length = 288 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 154/290 (53%), Gaps = 10/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G+NGQ+ + ++ ++ +D+ F + D+I+N AAYT Sbjct: 3 NILVTGSNGQLGSEIRALASEENIFYFTDSNALDITDRNAIECFCEENAIDIILNCAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE E + A +N +A+ A + ++ISTDYVFDG + P E T P Sbjct: 63 DVDEAEKEMKNADRVNHLAVKYLAEIARMRKMKLVHISTDYVFDGTNCKPYVEEDTTGPN 122 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG +KL GEE + +N +I+RT+WVYS FG+NF+ +MLRL ER E+ V+ DQ G Sbjct: 123 GVYGSTKLLGEEVLKMVNPHNAIIIRTSWVYSSFGNNFVKTMLRLGTEREELGVIFDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A+ I+QI + + ++H + + G SW D A+ IF E G Sbjct: 183 TPTYAGDLAKTILQIVPKI----ENENVEVYHFSNE-GVCSWFDLAKAIF----ELGNVK 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I TK YPT A RP YS L+ +K+ I I WKE + L I Sbjct: 234 CEVSPIETKAYPTPAKRPYYSVLNKTKIKTAFGISIPYWKESLGECLKKI 283 >gi|327399837|ref|YP_004340706.1| dTDP-4-dehydrorhamnose reductase [Hippea maritima DSM 10411] gi|327182466|gb|AEA34647.1| dTDP-4-dehydrorhamnose reductase [Hippea maritima DSM 10411] Length = 292 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 116/294 (39%), Positives = 162/294 (55%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 M LV G NGQ+ + + + + + +D+ K ++ F D+ Sbjct: 1 MNVLVTGANGQLGSEIKYLVKNNLTSNIKHLTFFFTDKDKLDITKKEEIEKFVKEKDIDL 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AAYTAVDKAE+E E++ IN + +A + I I+ISTDYVFDG + P Sbjct: 61 IINCAAYTAVDKAEEEKELSDLINHQAVKYLANISKENDITLIHISTDYVFDGKNYKPYK 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E TNP IYG +KL GEE + +I+RT+WVYS FG NF+ +MLRL K+R E++ Sbjct: 121 EDYKTNPQGIYGLTKLKGEEAFINSGARGIIIRTSWVYSTFGHNFVKTMLRL-KDRSELN 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPT A +A+AI++I E + IFH + + G SW DFA+ IF Sbjct: 180 VVFDQVGTPTYARDLAKAILEIIDKNYEKLNNFKAEIFHFSNE-GICSWYDFAKAIFDIK 238 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + K+ I TK YPT A RP YS L+ +K+ NI I W+E ++ +L Sbjct: 239 S----IDIKINPIETKDYPTPAKRPYYSVLNKNKIKKEFNIEIPYWRESLKKML 288 >gi|262163807|ref|ZP_06031547.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM223] gi|262027787|gb|EEY46452.1| dTDP-4-dehydrorhamnose reductase [Vibrio mimicus VM223] Length = 295 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 115/287 (40%), Positives = 165/287 (57%), Gaps = 6/287 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G +GQ+ L+ DVE + V R +D+ F P+VIIN A Sbjct: 2 MRILVTGCHGQVGYCLTQQLSAMADVEFLAVDREQLDITNLTQVDLVVNEFKPNVIINAA 61 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE E E++++IN +G +A+AA+ +G ++ISTDYVF G E PT Sbjct: 62 AHTAVDRAEQEIELSYAINRDGPQYLAQAANRVGALILHISTDYVFAGDKLCAYVETDPT 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRLA+ R + VV DQ Sbjct: 122 SPQGVYGQSKLAGEIAVAQACSRHIILRTAWVFGEHGNNFVKTMLRLAEIRDTLGVVADQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA+A+I +A ++E + G++H + +SW FA IF + E+ Sbjct: 182 FGGPTYAGDIAKALITMAKAIVEGKSVA-FGVYHFSGV-PHLSWHKFACTIFDNAREQAL 239 Query: 239 PYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V I TK YPT A RP+ S LD K+ I S W+ + Sbjct: 240 LSKTLQVNAITTKDYPTPAKRPSNSRLDSRKIHQNFGIAASDWQAAL 286 >gi|222148116|ref|YP_002549073.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] gi|221735104|gb|ACM36067.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium vitis S4] Length = 301 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 143/291 (49%), Positives = 191/291 (65%), Gaps = 3/291 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G GQ+ QSL +D++++ +GRP +DL P + L+ PD+II+ AA Sbjct: 6 RYLVTGLAGQVVQSLLEKASDRKDIDLVALGRPQLDLADPATIEAAVLAAKPDLIISAAA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + AF++N EG G +A+ A ++ IP I+ISTDYVFDG +P +E P Sbjct: 66 YTAVDQAETDEATAFTVNGEGPGELARVAKALDIPIIHISTDYVFDGSKASPYNEADPVA 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SKL GE +VA+ T+N+ ILRTAWVYS FG NFLL+MLRLA+ R E+ VV DQ Sbjct: 126 PLGVYGRSKLEGERRVAAETDNHAILRTAWVYSPFGKNFLLTMLRLAETRDELGVVADQI 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA A++++A NL+ + LRG FHMT G SWA+FA IF SAE+ P Sbjct: 186 GNPTSALDIADAVLKVADNLLSSKAADLRGTFHMTG-TGEASWAEFAREIFRLSAEQNDP 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +KV I YPT A RPA S LDC+KLA H I I W+ + ++ + Sbjct: 245 SAKVNPIPASAYPTPAKRPANSRLDCAKLARVHAIDIPDWRVSTQLVIDRL 295 >gi|323701365|ref|ZP_08113039.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM 574] gi|323533624|gb|EGB23489.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum nigrificans DSM 574] Length = 284 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 150/289 (51%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G G + Q + + + ++ + R ++++ LS PD++IN AA Sbjct: 1 MIILVTGAAGMLGQDVVAELARRGHRVLPMTRTELNITDLSQVRQVILSGQPDIVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + E A IN G G +A + IP + ISTDYVF G F Sbjct: 61 YTAVDQAEQDRERAMQINGLGVGNLALVCGELEIPLVQISTDYVFSGQKPGAYTVFDQPQ 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG SKLAGE+ V + ++RT+W++ ++G+NF+ ++LRLA+ER+E++VV DQ Sbjct: 121 PINAYGWSKLAGEKYVLQLLQRFYLVRTSWLFGLYGNNFVETILRLAQERKELTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +ARA+ + T G++H+T + G +W A I +S G Sbjct: 181 GCPTWTQDLARAVADLIA-------TGRYGVYHVT-NQGATTWFGLASAIISQS----GF 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + V + T YP A RP S LD L T + +W++ + L Sbjct: 229 DTVVKPVPTSAYPRPAARPVNSVLDSFPLKETIGYLLPSWQDALARYLQ 277 >gi|255654310|ref|ZP_05399719.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-23m63] gi|296452600|ref|ZP_06894294.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP08] gi|296880988|ref|ZP_06904934.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP07] gi|296258561|gb|EFH05462.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP08] gi|296428009|gb|EFH13910.1| possible dTDP-4-dehydrorhamnose reductase [Clostridium difficile NAP07] Length = 290 Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats. Identities = 113/295 (38%), Positives = 164/295 (55%), Gaps = 21/295 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L + I+ R D D+ + +F L+ PD Sbjct: 1 MKILITGSNGQLGKELVNQLEAINQSMSQPKYAILATTRNDFDIYNQTNVDNFILNNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V++N AAYT VD ED E A+ +NA G +A A++ + I+ISTDYVF+G S+ P Sbjct: 61 VVVNCAAYTKVDACEDNIETAYKVNALGVRNLAIASEKVNAKLIHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E S T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDSKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + + + II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLTKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E KV I + ++ KA RP YS LD L W+E + L Sbjct: 230 --ELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFRNWEESIEEYL 282 >gi|255524618|ref|ZP_05391571.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|255511642|gb|EET87929.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] Length = 293 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLS-------------SMCVQDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L ++D E ++D+ + S+ Sbjct: 1 MKLLITGGKGQLGCQLKFIIEKNSSDIGKLDQRIKDAECKFTDYNELDITNCAEVISYVS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SF PDVIIN AAYT VD E++ + AF +NA G +A A++ GI +++STDYVF+G Sbjct: 61 SFKPDVIINCAAYTNVDGCENDKDAAFKVNAIGPRNLAIASEKYGIKLLHVSTDYVFNGE 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP+++YGK+KL GE V + +NY I+RTAW+Y +G NF+ ++++ AK Sbjct: 121 GTVPFKEYDVPNPVSVYGKTKLLGESYVREHCSNYFIVRTAWLYGEYGKNFVYTIMKSAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + VV Q G PT A +A I++I T+ GI+H T G SW DFA Sbjct: 181 ENGHVDVVDYQRGNPTYAEDLAHHILKIIL-------TNEYGIYHCTG-TGECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I S G +V I + A RPAYS LD L T + WKE +++ + Sbjct: 233 KIVEYS----GIDCEVTPITPGKVNRLAKRPAYSSLDNMMLRVTLGDEMRPWKEALKSFI 288 Query: 288 VNI 290 + Sbjct: 289 TKV 291 >gi|121606379|ref|YP_983708.1| dTDP-4-dehydrorhamnose reductase [Polaromonas naphthalenivorans CJ2] gi|120595348|gb|ABM38787.1| dTDP-4-dehydrorhamnose reductase [Polaromonas naphthalenivorans CJ2] Length = 296 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 107/298 (35%), Positives = 165/298 (55%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQI L E++ + R D+ DL A + PDVI+N Sbjct: 1 MKILLLGKNGQIGWELQRSLAPLGEVVALDRHSQDLCGDLADLPGLARTVQAVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE E E+ +INA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDRAESESELVRTINALAPGMLAQEASKLGAWLVHYSTDYVFDGSGSRPWVESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG+SKL GE+ +A + ++ILRT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 121 TPAPLSVYGQSKLEGEQLIAEHCQRHLILRTSWVYAARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + G++H+ A G +W +A+++ ++A Sbjct: 181 DQWGAPTGAELLADVTAHAIRQALQCPQDA--GLYHLAA-SGETTWNGYAKHVIAQAARA 237 Query: 237 GGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + T +PT A RP S LDC++L T +++ W++GV +L I Sbjct: 238 QTAIKIVANDVAAVPTSAFPTPARRPHNSRLDCTRLQTTFGLKLPPWQQGVDRMLAEI 295 >gi|46451852|gb|AAS98027.1| RmlD [Shigella boydii] Length = 299 Score = 327 bits (840), Expect = 8e-88, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ T + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKK--TEVAGLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLVLNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|319791461|ref|YP_004153101.1| dtdp-4-dehydrorhamnose reductase [Variovorax paradoxus EPS] gi|315593924|gb|ADU34990.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus EPS] Length = 296 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 111/297 (37%), Positives = 160/297 (53%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E++ + D +P+ A L PDVI+N Sbjct: 1 MKLLLLGKGGQVGWELQRSLAPLGELVALDFDSTDFNADFSRPEQLAETVLKVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA G +A+AA IG ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDFARKLNATSPGVVAEAAQQIGALMVHYSTDYVFDGSGSKPWKEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL+IYG +KL GE+ VA + ++I RT+WVY+ G NF +MLR+AKER +++V+ Sbjct: 121 ATGPLSIYGSTKLEGEQLVAKHCARHLIFRTSWVYAARGGNFAKTMLRIAKERDKLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ D S G++H A GG +W +A ++ ++ Sbjct: 181 DQFGAPTGAELLADITAHAIRATLQ--DPSKAGLYHAVA-GGVTTWHGYARFVIEQAKAA 237 Query: 237 G----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G V + T +PT A RP S LD +KL +T + + W+ GV +L Sbjct: 238 GVELKAGPEAVEPVPTTAFPTPAKRPHNSRLDTTKLQSTFGLVLPEWQSGVARMLRE 294 >gi|296163283|ref|ZP_06846045.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] gi|295886465|gb|EFG66321.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] Length = 299 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 157/290 (54%), Gaps = 6/290 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L+ ++ V R +D+ P + + P +I+NPAAYTA Sbjct: 10 ILLTGVNGQVGFELARTLQGLGTVVAVDRAAMDMSDPDRVRAVVRNIRPALIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E ++A IN E G +A+ A +G ++ STDYVF+G P E PT+P N Sbjct: 70 VDKAEEELDLAMRINGEMPGVLAEEAKKLGAALVHYSTDYVFNGEKDCPYVEDDPTDPQN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KLAGE+ +A+ ++I RT+WVY G NFLL+MLRL ER E+SVV DQ G P Sbjct: 130 VYGRTKLAGEQAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAEREELSVVADQIGAP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSL---RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 T + IA + + SD G++H+TA G SW FA+ IF S P Sbjct: 190 TWSNTIATLTSNVLAQAVGGSDDWWKQSSGVYHLTA-SGATSWHGFAQAIFDNSKLPKKP 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I YPT A RPA S + KL +T +R W E + + Sbjct: 249 T--VKPIPAASYPTPAARPANSRMSSDKLFSTFGVRAPKWDEALLLCMAE 296 >gi|218699368|ref|YP_002406997.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IAI39] gi|253773028|ref|YP_003035859.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162032|ref|YP_003045140.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B str. REL606] gi|297520373|ref|ZP_06938759.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli OP50] gi|306814836|ref|ZP_07448998.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NC101] gi|218369354|emb|CAR17112.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli IAI39] gi|224613065|dbj|BAH24284.1| dTDP-4-dehydrorhamnose reductase subunit [Escherichia coli B] gi|242377692|emb|CAQ32452.1| dTDP-4-dehydrorhamnose reductase, subunit of dTDP-L-rhamnose synthetase [Escherichia coli BL21(DE3)] gi|253324072|gb|ACT28674.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973933|gb|ACT39604.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli B str. REL606] gi|253978127|gb|ACT43797.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BL21(DE3)] gi|305852230|gb|EFM52682.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli NC101] Length = 299 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|56476692|ref|YP_158281.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1] gi|56312735|emb|CAI07380.1| putative dTDP-4-keto-L-rhamnose reductase [Aromatoleum aromaticum EbN1] Length = 298 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 116/296 (39%), Positives = 153/296 (51%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ + ++I + R DL +P A+ PDVIIN AAY Sbjct: 1 MKLLVTGANGQVGWELARSLMPLGDVIALDRSRCDLSRPAALAALVDELEPDVIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + A IN G +A+ A G ++ STDYVFDG P DE P P Sbjct: 61 TAVDRAESDEAAATLINGVAPGELARVAKRRGALLVHYSTDYVFDGTKSAPYDEDDPVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG+SKLAGE + +++I RT WV++ G NF+ +MLRL ER + VV DQ G Sbjct: 121 INAYGRSKLAGELAIGESGCDHLIFRTTWVFAARGGNFVRTMLRLGAERDSLHVVADQIG 180 Query: 181 TPTSALQIARAI-IQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAER-- 236 PT A IA A + +A E S G+F++ A G SW FAE IF + + Sbjct: 181 APTWARNIADATALALARAQAERQQRSFSSGVFNL-ASRGETSWHGFAEAIFAGARAQLP 239 Query: 237 --GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V I + YPT A RPA S L KL I + W E + L + Sbjct: 240 GIGLKVAAVAPIPSSAYPTPAARPANSRLAAGKLQARFGIVMPRWDEALARCLDEL 295 >gi|16129980|ref|NP_416544.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. MG1655] gi|89108860|ref|AP_002640.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. W3110] gi|170081670|ref|YP_001730990.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. DH10B] gi|238901230|ref|YP_002927026.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BW2952] gi|2507299|sp|P37760|RMLD_ECOLI RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|1736730|dbj|BAA15882.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K12 substr. W3110] gi|1788352|gb|AAC75101.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. MG1655] gi|2665490|gb|AAB88399.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|169889505|gb|ACB03212.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli str. K-12 substr. DH10B] gi|238861012|gb|ACR63010.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Escherichia coli BW2952] Length = 299 Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats. Identities = 114/296 (38%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|311278964|ref|YP_003941195.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1] gi|308748159|gb|ADO47911.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae SCF1] Length = 293 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 111/290 (38%), Positives = 168/290 (57%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L+ + +VE++ + +D++ + + PD+IIN A Sbjct: 1 MKVLLTGCNGQVGYCLAEQLKKISNVELLAFDKEQLDIVDTEQVNNIVSEKKPDIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE E ++A+SIN GA +A+AA +G I+ISTDYVF G E T Sbjct: 61 AYTAVDKAEAESQLAYSINHIGAKNLAEAATKVGALLIHISTDYVFPGTKEGLYTESDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YG+SKL GE + + Y+I+RTAWV+ G NF+ +MLRLAK +++ VV DQ Sbjct: 121 GPVSVYGRSKLDGENAIIASCAKYIIIRTAWVFGEHGHNFVKTMLRLAKTNKQLKVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 G PT A IA+AI+ IA + +T G++H + V+W+DFA IF ++ ++ Sbjct: 181 QGGPTYAGDIAKAIVAIAVKFM-KEETVAYGLYHYSG-LPHVTWSDFAREIFNKAKDKNV 238 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V I T YPT A RP S L+ ++ +I+ S W+ + +I Sbjct: 239 LADIPQVIDIATTDYPTPAQRPKNSKLNTERITQEFDIQASDWQIALNSI 288 >gi|281179139|dbj|BAI55469.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli SE15] Length = 299 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNSVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|327482001|gb|AEA85311.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 306 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 165/291 (56%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + L + ++++ R +D+ KP+ A P++IIN AA Sbjct: 1 MRILVCGAGGQVGRELVERASRFGLDVLAPARAQLDIAKPEQVADAMRQ-RPELIINAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE E A+++N +G +A+AA G+P +ISTDYVF G + P E T Sbjct: 60 YTHVDNAESHGEQAYAVNRDGPRHLAEAAKHAGVPLFHISTDYVFSGEATRPYTESDETG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGEE + S ++ILRT+WVY + G NF+ +MLRLA++R + VV DQ Sbjct: 120 PTGVYGASKLAGEEAIRSCLPAHLILRTSWVYGVHGHNFVKTMLRLARQRDALGVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW--ESAERG 237 G PT A IA ++++A + ++ + G++H + SW DFA IF E+A Sbjct: 180 GCPTQAGSIASVLLELARRYADGAELAW-GVYHYSG-APACSWYDFAVEIFRQGEAAGLI 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V I T QYPT A RPA+S LDCS+ + W+E + ++L Sbjct: 238 ARQPEVSPIMTAQYPTPARRPAWSVLDCSRFEAAFGLAPHRWQEDLADVLA 288 >gi|239813762|ref|YP_002942672.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110] gi|239800339|gb|ACS17406.1| dTDP-4-dehydrorhamnose reductase [Variovorax paradoxus S110] Length = 296 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 112/297 (37%), Positives = 161/297 (54%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E++ + D +P+ A L PDVI+N Sbjct: 1 MKLLLLGKGGQVGWELQRSLAPLGELVALDFDSTDFNADFSRPEQLAETVLKVRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA G +A+AA IG ++ STDYVFDG TP E Sbjct: 61 AAAHTAVDKAESEPEFARKLNATSPGVVAEAAQQIGALMVHYSTDYVFDGSGSTPWKEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YG++KL GE+ VA + ++I RT+WVY+ G NF +MLR+AKER ++V+ Sbjct: 121 ATGPLSVYGRTKLEGEQLVARHCAKHLIFRTSWVYAARGGNFAKTMLRIAKERDRLTVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ D + G++H A GG +W +A ++ ++ Sbjct: 181 DQFGAPTGAELLADVTAHAIRATLQ--DPAKAGLYHAVA-GGETTWHSYARFVIEQAKAA 237 Query: 237 G----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G V + T +PT A RPA S LD KL T + + W++GV +L Sbjct: 238 GVELKAGPEAVDPVPTSAFPTPATRPANSRLDTRKLQATFGLVLPHWQQGVARMLRE 294 >gi|209696412|ref|YP_002264343.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida LFI1238] gi|208010366|emb|CAQ80704.1| dTDP-6-deoxy-l-mannose-dehydrogenase [Aliivibrio salmonicida LFI1238] Length = 293 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G GQ+ L++ V ++ + R +D+ + F P +IIN A Sbjct: 1 MRVLITGCYGQVGHCLTAQLVNKASTSVLALDRDQLDITNQDAVNAIADDFQPTIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAEDE +++++IN +G +A+AA +G ++ISTDYVF+G DE T Sbjct: 61 AHTAVDKAEDEVDLSYAINRDGPNYLAQAAQRVGAAMLHISTDYVFEGNKVGEYDERDVT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG+SKLAGE VA+ + ++ILRTAWV+ G+NF+ +MLRL R E+S+V DQ Sbjct: 121 HPQGVYGESKLAGESAVANACDKHIILRTAWVFGEHGNNFVKTMLRLGVTRDELSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+I IA + + + G++H + VSW +FA+ IF + E+G Sbjct: 181 FGGPTYAGDIANALITIAERITQGNMVD-YGVYHYSG-LPHVSWYEFADAIFDTAKEQGV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ SCL+ +K+ +I S W+ ++NI Sbjct: 239 IKTKPSLTGITTVQYPTPAKRPSNSCLNTNKITTAFSIEASDWQTALKNI 288 >gi|77460278|ref|YP_349785.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] gi|77384281|gb|ABA75794.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] Length = 297 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 106/297 (35%), Positives = 161/297 (54%), Gaps = 10/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 M+ L++G NGQ+ L E++ + R + DL + + + PDVI+ Sbjct: 1 MRILLLGKNGQVGWELQRSLAPLGELLSLDRQTVGGLCGDLTDLEGLRATIRTVRPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE E E+ +N + A+A+ A S+G ++ STDYVF G TP E Sbjct: 61 NAAAYTAVDKAESERELVDLVNVKAVQALAEEALSLGAWLVHYSTDYVFSGEGTTPWLED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + P+N YG SK AGEE V + Y+I R +W+YS G+NF +MLRLA+ER E++V+ Sbjct: 121 AAVAPVNHYGASKFAGEEAVVASGCKYLIFRPSWIYSARGNNFAKTMLRLAREREELNVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA +++ D + G++H+ A G VSW +A+++ + Sbjct: 181 NDQIGAPTGADLIADVTAHAIRQVLQRPDLA--GVYHLAA-AGEVSWHGYAQHVVEVAKA 237 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + I T Y T A RP S L+ KL + ++ + W+ GV +L+ + Sbjct: 238 HGETLAVMSINPIETAAYSTPARRPRNSRLNTRKLRDNFSLHLPDWQSGVTRMLMEV 294 >gi|62955958|gb|AAY23334.1| RmlD [Shigella boydii] Length = 299 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|282880339|ref|ZP_06289053.1| dTDP-4-dehydrorhamnose reductase [Prevotella timonensis CRIS 5C-B1] gi|281305841|gb|EFA97887.1| dTDP-4-dehydrorhamnose reductase [Prevotella timonensis CRIS 5C-B1] Length = 282 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 158/291 (54%), Gaps = 12/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + + Q + + ++D+ K F + D I+N A Sbjct: 1 MNILITGCNGQLGREMQRLEKQMKEHQWWNTDVDELDITDQKAIEEFVTAHEIDGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE+ ++A ++NAE +A A I ISTDYVFDG TP E Sbjct: 61 AYTAVDKAEENKQLATALNAEAPAYLAAAIAKRKGWIIQISTDYVFDGTQHTPYTETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE V +VI+RTAW+YS+ G NF+ +M++L KE+ E+ V+ DQ Sbjct: 121 CPNSVYGATKLAGEVAVRQICPEHVIIRTAWLYSVHGHNFVKTMIKLGKEKSELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ I+ I I + G +H + + G +SW DF + I + G Sbjct: 181 IGTPTYAGDLAQTIMTIIKKGI------VPGTYHYSNE-GVISWYDFTKAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V+ + T YPT A RP YS LD +K+ T++I I W+E + ++ Sbjct: 231 TTCHVHPLHTADYPTAAKRPHYSVLDKTKIKTTYDIEIPYWEESLAKMIEE 281 >gi|260856023|ref|YP_003229914.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|24417731|gb|AAN60455.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|56800697|gb|AAW31111.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|77737730|gb|ABB01682.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] gi|257754672|dbj|BAI26174.1| predicted dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli O26:H11 str. 11368] gi|323152430|gb|EFZ38718.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli EPECa14] Length = 299 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWLIHYSTDYVFPGNGDMPWRETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQKFALVLPDWQVGVKRMLNEL 293 >gi|315299447|gb|EFU58698.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 16-3] Length = 299 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YGK+KLAGE + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 VTAPLNVYGKTKLAGERALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A+ G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAN-GTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIDLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|238021192|ref|ZP_04601618.1| hypothetical protein GCWU000324_01090 [Kingella oralis ATCC 51147] gi|237868172|gb|EEP69178.1| hypothetical protein GCWU000324_01090 [Kingella oralis ATCC 51147] Length = 293 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 112/284 (39%), Positives = 153/284 (53%), Gaps = 6/284 (2%) Query: 4 LVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L D +I R +D+ + P +IIN AA+T Sbjct: 5 LITGANGQVGSQLVRQLQARPDATVIAADRDTLDITDRAAVFQAAQTHRPHIIINAAAHT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A +IN +G +A+AA +I ++ISTDYVFDG P E T P Sbjct: 65 AVDKAESEPELARAINVDGTRHLAEAAQAISAAFLHISTDYVFDGKGEAPYRETDSTAPQ 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE + ++LRTAWV+ G+NF+ +MLRL +ER + +V DQFG Sbjct: 125 SVYGQTKLDGETAALAACPRTIVLRTAWVFGEHGNNFVKTMLRLGRERDTLGIVADQFGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT A IA A+IQIA + I G++H + SW FA IF +AE+ Sbjct: 185 PTYAGDIAAALIQIARH-IAAGQPVEYGVYHFSG-SPYTSWHGFAGEIFRRAAEQNLLPR 242 Query: 241 -SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + I T YPT A RPA S LDCSK+ I S W+ + Sbjct: 243 IPTLNAIATADYPTPARRPANSRLDCSKIQAAFGIAPSDWQAAL 286 >gi|153010043|ref|YP_001371258.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum anthropi ATCC 49188] gi|151561931|gb|ABS15429.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum anthropi ATCC 49188] Length = 292 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 137/292 (46%), Positives = 180/292 (61%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G GQ+ QSL Q D+E+I +GRP++DL KP S + PD++++ A Sbjct: 1 MKILVTGREGQVVQSLLEKAAQRSDLEVIALGRPELDLAKPDTVRSAIAAIKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AED E+AF+ NA GA +A+AA + G P I++STDYVF G + P E T Sbjct: 61 AYTAVDLAEDNKELAFAANATGAEVVAEAAKACGAPVIHLSTDYVFAGDADEPYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE VA ++I+RTAWVYS FG NF+ +ML+LA+ R +SVV DQ Sbjct: 121 GPRGVYGSSKLEGERLVAQSNPQHIIMRTAWVYSPFGKNFVKTMLKLAETRDALSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AIIQ+A +L D S G++H+ G +W+ FA IF ESA GG Sbjct: 181 WGNPTSALDIADAIIQVADHLAATPDFSAYGVYHLVG-MGNTNWSSFARAIFDESATLGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I T YPTKA RPA S L +K N WK +R+++ + Sbjct: 240 PTANVTDITTADYPTKAVRPANSRLSTAKFQQVFNWSAPHWKSSLRDVVARL 291 >gi|73809578|gb|AAZ85704.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Escherichia coli] Length = 299 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|300930357|ref|ZP_07145768.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 187-1] gi|300461757|gb|EFK25250.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 187-1] Length = 299 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPKGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQKHCAKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|319788035|ref|YP_004147510.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas suwonensis 11-1] gi|317466547|gb|ADV28279.1| dTDP-4-dehydrorhamnose reductase [Pseudoxanthomonas suwonensis 11-1] Length = 310 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 119/301 (39%), Positives = 166/301 (55%), Gaps = 15/301 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFSP 51 + L++G NGQ+ + L + E++ + R DL +P+ A+ +P Sbjct: 3 RILLVGGNGQLGRELRRSLIALGEVVAMTRDGRLHDGGSAIAADLDEPQRLAAVVREVAP 62 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D ++N AAYTAVDKAE EPE AF IN E G +A+A + GIP ++ STDYVFDG P Sbjct: 63 DAVVNAAAYTAVDKAESEPEAAFRINGEAPGVLAQACAAAGIPLVHYSTDYVFDGQGTRP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E PT PL +YG SKLAGEE + + +++ RTAWVY+ NFL +MLRL ER E Sbjct: 123 YREDDPTAPLGVYGASKLAGEEAIRAAGGQHLVFRTAWVYAAHSHNFLRTMLRLGAERDE 182 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ GTPT A IA + D + G +H+ AD G SW FAE IF Sbjct: 183 LRVVDDQVGTPTPAAMIADVTAVALRRAL--GDAGVSGTWHLVAD-GHTSWHGFAEAIFA 239 Query: 232 ESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E+ G V+ + + ++PT A RPAYS LD S L +++ W+E + ++ Sbjct: 240 EAVAAGVLARAPTVHPVTSAEFPTPARRPAYSRLDTSALQRDFGVQLLHWREALVPVMAE 299 Query: 290 I 290 + Sbjct: 300 L 300 >gi|221200996|ref|ZP_03574036.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221206552|ref|ZP_03579565.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221173861|gb|EEE06295.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221178846|gb|EEE11253.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 303 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 145/292 (49%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTA Sbjct: 9 ILLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLDQVRDVVRDLKPDLIVNPAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +A +NAE +A+ A IG I+ STDYVF G P E +P N Sbjct: 69 VDQAETDVAMATRLNAEAPAVLAEEAKRIGAALIHYSTDYVFSGTKAGPYVEDDAVDPQN 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E++VV DQ G P Sbjct: 129 VYGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELNVVADQIGAP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T + IA + I GI+H+ A G SW FAE IF + Sbjct: 189 TWSNTIATLTAHVVAQAISAPMRDEWWHAHSGIYHLCA-AGSTSWHGFAEAIFRLADLAK 247 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P V I YPT A RPA S + +KLA + W+ + ++ Sbjct: 248 KPA--VMPIPASAYPTPAKRPANSQMSNAKLAEHFGLHAPHWEAALALCMMQ 297 >gi|194334529|ref|YP_002016389.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM 271] gi|194312347|gb|ACF46742.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris aestuarii DSM 271] Length = 296 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 150/289 (51%), Gaps = 9/289 (3%) Query: 1 MKCLVIGNNGQIAQSLS--SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ + +M + ++D+ DVIIN A Sbjct: 1 MNILVTGSKGQLGSEIRDAAMLDGGLRFFFCDLAELDITDRDAVVRMCERDGIDVIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AED+ + A +N +G G +A+ A G + +STDYVF+G S P E Sbjct: 61 AYTAVDRAEDDADTAMRVNRDGPGVLAECARERGALLLQVSTDYVFNGESSVPYRECDEV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SK GEE V +Y+I RT+W+YS G+NF+ +MLRL ER E+ VV DQ Sbjct: 121 SPLGVYGQSKWEGEELVRRSGASYMIFRTSWLYSAHGNNFVKTMLRLGAERDELRVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTP A +ARA++ + + + +H + + G SW DFA I GG Sbjct: 181 VGTPCYAADLARALMHVLERV--EPGVNYAATYHFSNE-GVCSWYDFAVMIM----RLGG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + ++P K RP +S L+ K+ + + W +G+ ++ Sbjct: 234 LGCRVVPIESSEFPAKVTRPHFSVLNKGKIKADWGVDVPHWMDGLERMM 282 >gi|73809590|gb|AAZ85715.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] Length = 299 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-TGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|293415328|ref|ZP_06657971.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B185] gi|291432976|gb|EFF05955.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B185] Length = 299 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVGSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|115503059|gb|ABI98982.1| RmlD [Escherichia coli] Length = 300 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|331647691|ref|ZP_08348783.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli M605] gi|331043415|gb|EGI15553.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli M605] Length = 299 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA G AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATGVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|168481339|gb|ACA24825.1| RmlD [Escherichia coli] gi|320198730|gb|EFW73330.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli EC4100B] Length = 299 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|291543268|emb|CBL16377.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. 18P13] Length = 286 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 157/295 (53%), Gaps = 16/295 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + V ++D+ P+ + +PDV+I+ AA Sbjct: 1 MKALVTGVKGQLGFDVVNELKNRGHDAVGVDIEEMDITDPESVSRVIGEAAPDVVIHCAA 60 Query: 60 YTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS- 116 +TAVD AED IA ++NA G IA+ + +YISTDYVF+G P Sbjct: 61 WTAVDAAEDPENIAKVRAVNAGGTRNIAQVCKKLDCKMMYISTDYVFNGQGTQPWQPDCR 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN+YG++KL GE VA Y I+R AWV+ GSNF+ +ML + K+ + VV Sbjct: 121 DYAPLNVYGQTKLEGELAVADTLEKYFIVRIAWVFGKNGSNFIKTMLNVGKKHDTVRVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT L +AR ++ +A ++ G +H T +GG +SW DF I+ ++ Sbjct: 181 DQIGTPTYTLDLARLLVDMA-------ESEKYGYYHATNEGGYISWYDFTCEIYKQA--- 230 Query: 237 GGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V + T +Y +KA RP S LD SKLA + W++ ++ L I Sbjct: 231 -GYATRVVPVTTAEYGLSKAARPFNSRLDKSKLAENGFQPLPAWQDALQRYLKEI 284 >gi|261378780|ref|ZP_05983353.1| dTDP-4-dehydrorhamnose reductase [Neisseria cinerea ATCC 14685] gi|269144758|gb|EEZ71176.1| dTDP-4-dehydrorhamnose reductase [Neisseria cinerea ATCC 14685] Length = 287 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 110/292 (37%), Positives = 164/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + +F PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVFNMVKNFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDKAE+ AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TSVDKAEENVTTAFAVNASAVYNLASAAHRTHARFIHISTDYVFDGQANKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LNIYGKSK AGE S + +ILRT+W++S +G NF+ +ML LA ER + VV +Q G Sbjct: 121 LNIYGKSKAAGELLALSANSESLILRTSWLFSEYGDNFVRTMLNLANERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A AII++ + +RGI+H G SW +FA +IF + ++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----SSPVRGIYHFAG-GKSASWYEFARHIFQTALQQDTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PVPELNAVSDEEYPDAASRPPYSILDCRKIESDFGIKPSDWQKALSQVVLKL 286 >gi|312797096|ref|YP_004030018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] gi|303399366|emb|CBK52866.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] gi|312168871|emb|CBW75874.1| dTDP-4-dehydrorhamnose reductase [Burkholderia rhizoxinica HKI 454] Length = 312 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 156/291 (53%), Gaps = 8/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQI L +++ V R DL +P + + P VI+NPAAYTA Sbjct: 14 ILVTGVTGQIGSELVRTMQGLGKVVAVDRATFDLTEPNQMRAVIRAIKPTVIVNPAAYTA 73 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD A+ P++A +NA+ G +A+ A +G I+ STDYVF+G +P E +P N Sbjct: 74 VDAAQSNPDLAMQVNAKAPGVLAEEARRVGAAMIHYSTDYVFNGEKDSPYVEEDEADPKN 133 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE +AS +++ILRT+WVY + G NFLL+MLRL ER EI VV DQFG P Sbjct: 134 VYGFSKLAGERAIASAGAHHLILRTSWVYGMRGRNFLLTMLRLGTERDEIKVVADQFGAP 193 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-----GIFHMTADGGPVSWADFAEYIFWESAERG 237 T + IA I + DT G++H+TA G SW FA+ IF A Sbjct: 194 TWSNTIATLTAHIVSQALAAHDTRQWWQERSGLYHLTA-AGSTSWHGFAKAIFDAIALE- 251 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I + +PT+A RPA SCL KL ++ W + ++ L Sbjct: 252 -RVPTVMPIPSSDFPTQAERPANSCLSNGKLERVFGLQSPQWDQALKLCLQ 301 >gi|332529598|ref|ZP_08405554.1| dTDP-4-dehydrorhamnose reductase [Hylemonella gracilis ATCC 19624] gi|332040948|gb|EGI77318.1| dTDP-4-dehydrorhamnose reductase [Hylemonella gracilis ATCC 19624] Length = 300 Score = 326 bits (837), Expect = 2e-87, Method: Composition-based stats. Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L+ G NGQ+ L E+I V R +D L + P VI+ Sbjct: 1 MKILLFGKNGQVGWELQRSLAPLGEVIAVDRVGVDGLCGDLSDLDCLQRTVRAVQPQVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVD AE + A+ INAE G +A+AA ++ STDYVFDG P E Sbjct: 61 NAAAYTAVDLAETDVAAAYRINAEAPGVLARAAAQHDALLVHYSTDYVFDGSGERPWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL++YG++KL GE+ + + + ++I RT+WVY+ G NF +MLRLA E+ E+ + Sbjct: 121 DAPAPLSVYGRTKLEGEQAIRASSCRHLIFRTSWVYAARGDNFAKAMLRLAVEQDELRAI 180 Query: 176 CDQFGTPTSALQIARAIIQIA-HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G PT A +A ++ N ++ GI+H+ A G SW D+A ++ + Sbjct: 181 NDQLGAPTGADLLADVTAHAIRWVVLANDGSAASGIYHL-ASAGEASWFDYARFVLAHAQ 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++G +V I YP A RP S LDC++L T + + W+ G+ +L I Sbjct: 240 QKGRVLKVAPQQVRAIPASAYPGSARRPHNSRLDCTRLRQTFGLALPPWQSGMTRMLDEI 299 >gi|91782042|ref|YP_557248.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] gi|91685996|gb|ABE29196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] Length = 305 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 116/294 (39%), Positives = 159/294 (54%), Gaps = 7/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+ GQ+ L ++ + R DL P S PDVI+NPAAYTA Sbjct: 11 LLVTGSRGQVGFELRRSLASLGNVVALDRSVCDLRSPDSIRSVVREVQPDVIVNPAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE++ E+A++IN AG +A+ A S+G ++ STDYVFDG P E NP + Sbjct: 71 VDAAENDAELAYAINGVAAGVLAEEAKSLGGLLVHYSTDYVFDGRKDGPYVETDVVNPQS 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGE+ +A ++LRT WV GSNF +MLRL +ER + V+ DQ+G P Sbjct: 131 VYGKSKLAGEQAIAERGATAIVLRTCWVAGAHGSNFAKTMLRLGRERDSLRVIADQYGAP 190 Query: 183 TSALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 T+A IA QI H L + G++H+ A G SW +A + +A RG Sbjct: 191 TTAALIADVTAQIVARHWLHGDRAAFASGVYHLAA-AGQTSWHGYATEVLQFAAARGVEL 249 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T YP A RPA S LD KL T I + W++GV ++L I Sbjct: 250 KVDLARIEPIATADYPLPAPRPANSRLDTHKLRQTFGINLPDWRDGVHHLLEQI 303 >gi|168481328|gb|ACA24815.1| RmlD [Escherichia coli] Length = 299 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|325527143|gb|EGD04546.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. TJI49] Length = 299 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 145/289 (50%), Gaps = 7/289 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL + S P +I+NPAAYTA Sbjct: 12 ILVTGVNGQVGFELLRTLQGLGRVVACDRSMLDLSDLERVRSVVRDLKPSIIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + E A +NA+ A+ A G I+ STDYVFDG E TNP N Sbjct: 72 VDKAETDIEGARRLNADVPRVFAEEAARSGAVLIHYSTDYVFDGTKDGAYVETDATNPQN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ +V DQ G P Sbjct: 132 VYGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELKIVADQIGAP 191 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA I + G++H A GG SW FAE IF + G Sbjct: 192 TWSNSIATLTAHIVAQGLAVDSPEWWRARSGVYHFAA-GGETSWHGFAESIFRLA--LGD 248 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I +YP A RPA S + KLA T +R+ W + ++ L Sbjct: 249 KAPRTIPIPASEYPVPARRPANSRMSGDKLAQTFGVRMPAWDDALKLCL 297 >gi|167623419|ref|YP_001673713.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167353441|gb|ABZ76054.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 120/290 (41%), Positives = 173/290 (59%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ SL+ +D ++ + R +D+ + + F P +IIN A Sbjct: 1 MRVLITGCNGQVGCSLTEQLAKDTNTTVLALDRDYLDITNLDAVHAAVVEFKPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E E++++IN +G +A+AA +G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVELSYAINRDGPKYLAQAAQDVGAAILHISTDYVFEGNKVGEYVESDTT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE VA + ++ILRTAWV+ G+NF+ +MLRL R ++VV DQ Sbjct: 121 NPQGVYGESKLAGEVAVAQACDKHIILRTAWVFGENGNNFVKTMLRLGTTRDALNVVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+IQIA+ I D G++H + VSW +FAE IF + E+G Sbjct: 181 FGGPTYAGDIANALIQIANR-ITQGDAIEYGVYHFSG-LPHVSWYEFAETIFDIAIEKGV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + I T+QYPT A RP+ SCL+ K+ + I S WK + NI Sbjct: 239 LKKRPSLSNIKTEQYPTPAKRPSNSCLNTDKITSVFAIEASDWKVALNNI 288 >gi|9957830|gb|AAG09510.1|AF279618_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 163/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + + W+ GV+ +L + Sbjct: 238 GLTLALTELNAVPTSAYPTPASRPGNSRLNTEKFQSNFGLILPQWELGVKRMLTEM 293 >gi|107021950|ref|YP_620277.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116688897|ref|YP_834520.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105892139|gb|ABF75304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116646986|gb|ABK07627.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 299 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 144/291 (49%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL S P +I+NPAAYTA Sbjct: 12 ILVTGVNGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRVRSVVRELKPSIIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + + A +N E A A+ A +G ++ STDYVFDG E TNP N Sbjct: 72 VDKAETDVDAARRLNVEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G P Sbjct: 132 VYGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAP 191 Query: 183 TSALQIARAIIQIA----HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA A I + G++H T+ G SW FAE IF ++ G Sbjct: 192 TWSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQA--MGE 248 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I YP A RP+ S L KL +R+ W + + L Sbjct: 249 RAPRVLPIPASDYPVPAKRPSNSRLSHDKLTEAFGLRLPDWADALTLCLSE 299 >gi|84386938|ref|ZP_00989962.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] gi|84378228|gb|EAP95087.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] Length = 293 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 119/290 (41%), Positives = 173/290 (59%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ SL+ ++ E++ + R +D+ + F P +IIN A Sbjct: 1 MRILITGCHGQVGSSLTEQLANYENTEVLALDREHLDITSQDAVNAAVAEFKPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+AA S+G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEADLSYAINRDGPKYLAQAAQSVGAAILHISTDYVFEGNKAGEYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YGKSKLAGE VA + ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGKSKLAGESAVAEACDKHIILRTAWVFGESGNNFVKTMLRLGENRNALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+IQIA I D G++H + VSW DFA+ IF + E+G Sbjct: 181 FGGPTYAGDIANALIQIAKR-INQGDVVEYGVYHYSG-LPHVSWFDFADAIFDVAVEQGV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ S L K+ +++ S WK + NI Sbjct: 239 LANKPSLTSITTDQYPTPAKRPSNSRLSTEKITLGFSVKESDWKAELNNI 288 >gi|93005457|ref|YP_579894.1| dTDP-4-dehydrorhamnose reductase [Psychrobacter cryohalolentis K5] gi|92393135|gb|ABE74410.1| dTDP-4-dehydrorhamnose reductase [Psychrobacter cryohalolentis K5] Length = 287 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 117/284 (41%), Positives = 166/284 (58%), Gaps = 4/284 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ L ++ +I + +D+ P++IIN AAYT Sbjct: 3 RVLVTGAKGQVGSELVNLVPAGFTVIGLSSAQLDITDQDQVNVAVALHQPNLIINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A++IN + +A+AA IP +ISTDYVFDG S TP E NP Sbjct: 63 AVDKAESDSDNAYAINEKAVAWLAQAAAHADIPLFHISTDYVFDGESTTPYKETDSINPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SKLAGE+ +A+ N ++ILRT+WV+S G+NF+ +MLRLAKER E+S+V DQ G Sbjct: 123 SVYGASKLAGEQMLAATHNKHIILRTSWVFSARGNNFVKTMLRLAKERDELSIVGDQHGC 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PTSA IA + ++A L + +D+ GI++ + SW +FA IF ++ E G Sbjct: 183 PTSATSIADILWKLAE-LYQQTDSLPWGIYNFSNSS-ACSWYEFAVEIFKQARESGFIPQ 240 Query: 241 -SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + +I T YPT A RPA+S LDCSKL +I WK + Sbjct: 241 TPTIKKITTADYPTPAVRPAFSVLDCSKLEKLLGQKIPEWKSEL 284 >gi|9957816|gb|AAG09499.1|AF279615_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVVLNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|117624236|ref|YP_853149.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli APEC O1] gi|237704494|ref|ZP_04534975.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia sp. 3_2_53FAA] gi|300936656|ref|ZP_07151560.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 21-1] gi|115513360|gb|ABJ01435.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli APEC O1] gi|226900860|gb|EEH87119.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia sp. 3_2_53FAA] gi|288816199|gb|ADC54923.1| RmlD [Escherichia coli] gi|300458237|gb|EFK21730.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 21-1] gi|323951792|gb|EGB47666.1| RmlD substrate binding domain-containing protein [Escherichia coli H252] Length = 299 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLEMD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARNA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|157158895|ref|YP_001463391.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli E24377A] gi|157080925|gb|ABV20633.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli E24377A] Length = 299 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKFNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|254973883|ref|ZP_05270355.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-66c26] gi|255091268|ref|ZP_05320746.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile CIP 107932] gi|255312927|ref|ZP_05354510.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-76w55] gi|255515686|ref|ZP_05383362.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-97b34] gi|255648780|ref|ZP_05395682.1| dTDP-4-dehydrorhamnose reductase, rfbD ortholog [Clostridium difficile QCD-37x79] gi|260682000|ref|YP_003213285.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196] gi|260685598|ref|YP_003216731.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291] gi|306518897|ref|ZP_07405244.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile QCD-32g58] gi|260208163|emb|CBA60476.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile CD196] gi|260211614|emb|CBE01844.1| dtdp-4-dehydrorhamnose reductase [Clostridium difficile R20291] Length = 290 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 116/295 (39%), Positives = 166/295 (56%), Gaps = 21/295 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK L+ G+NGQ+ + L S I+ R D+D+ + +F L PD Sbjct: 1 MKILITGSNGQLGKELVSQLEAINQSINQPKYVILATTRNDLDISNQTNIDNFILHNKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AAYT VD ED EIA+ INA G +A A++ + ++ISTDYVF+G S+ P Sbjct: 61 VIVNCAAYTKVDACEDNIEIAYKINALGVRNLAIASEKVNAKLVHISTDYVFNGFSKYPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E + T P ++YGKSKL GE+ V +++ Y ILRTAW+Y G+NF+ +M++L+ E +E+ Sbjct: 121 REDNKTEPNSVYGKSKLMGEKFVEQFSHKYFILRTAWLYG-NGNNFVKTMIKLSLENKEV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQFGTPTS + +A+ II+I +T G++H T + G SW DFA+ IF Sbjct: 180 NVVNDQFGTPTSTVDLAKIIIRIM-------ETEHYGVYHATCE-GECSWYDFAKKIF-- 229 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E KV I + ++ KA RP YS LD L W+E + L Sbjct: 230 --ELKNIDIKVNPIKSNEFKCKAQRPLYSVLDNFMLKLIGLNSFRKWEESIEEYL 282 >gi|288963205|ref|YP_003453484.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] gi|288915457|dbj|BAI76940.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] Length = 296 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 125/291 (42%), Positives = 178/291 (61%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV+G+NGQ+ L D EI+ + P+ D+ +P D + +PD+++N A Sbjct: 1 MKILVLGSNGQLGFELMRANWAPDTEIVGLPYPEFDVTRPGDVEKAVATHAPDLLVNATA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDKAE E E++F++N +G GA+A A + GIP I++STDYVFDG E P N Sbjct: 61 HTAVDKAESEVELSFAVNRDGPGAMAAACAARGIPFIHVSTDYVFDGTKDGLYSEDDPIN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK AGEE V + ++VILRT+WVYS +G+NF+ +MLR KER E+ VV DQ Sbjct: 121 PLGVYGASKAAGEEAVRRASPHHVILRTSWVYSAYGNNFVKTMLRFGKEREEMRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A +A AI+QIA IE + ++ G +H+T G +W FAE+IF ER G Sbjct: 181 GSPTAAADLAAAIVQIAGT-IETTGSAAWGTYHLTG-SGYTTWHGFAEHIFRRLEERTGK 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T YPT A RPA S LDCS + W++ + ++ + Sbjct: 239 RPRLTAIGTADYPTPARRPANSRLDCSGAKERLGVSCPPWQDSLDRVIDEL 289 >gi|86147259|ref|ZP_01065574.1| probable dTDP-4-rhamnose reductase [Vibrio sp. MED222] gi|85834974|gb|EAQ53117.1| probable dTDP-4-rhamnose reductase [Vibrio sp. MED222] Length = 293 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 10/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ L+ +++ ++ + R +D+ + + F P +IIN A Sbjct: 1 MRVLITGCHGQVGSCLTKQLANNENIAVLALDREHLDITSQEAVNAIVAEFEPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+AA S+G ++ISTDYVFDG E T Sbjct: 61 AHTAVDKAEEELDLSYAINRDGPKYLAQAAQSVGAAMLHISTDYVFDGDKVGEYAETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YGKSKLAGE VA ++ILRTAWV+ G+NF+ +MLRLA +S+V DQ Sbjct: 121 NPQGVYGKSKLAGEIAVAQECKKHIILRTAWVFGENGNNFVKTMLRLANSYESLSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A++ IA I N +T GI+H + VSW+ FA+ IF E+ E+G Sbjct: 181 FGGPTYAGDIASALVTIA-KAICNGETDRFGIYHFSG-LPHVSWSQFAQAIFDEAVEQGV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW----KEGVRNI 286 V I T++YPT A RP S L+ + + NT I S W K G++ Sbjct: 239 LKCSPAVNSITTEEYPTLAKRPENSKLNTTLIRNTFGINASDWVSRLKLGIKRY 292 >gi|222528113|ref|YP_002571995.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM 6725] gi|222454960|gb|ACM59222.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor bescii DSM 6725] Length = 281 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 97/284 (34%), Positives = 145/284 (51%), Gaps = 12/284 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+ + + +D+ S+ + P++II+ AAYT Sbjct: 2 ILITGSKGQLGSEFIKQFENKYNVKGIDIEQVDITDLDSTVSYISATKPNIIIHCAAYTN 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E + + AF +NA G +A AA+ +G +YISTDYVFDG P +EF NP++ Sbjct: 62 VDGCESDKDTAFKVNAIGTRNVAMAAEKVGAKLVYISTDYVFDGEKEKPYNEFDRPNPIS 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG SKLAGEE V ++ + Y I+R AW+Y G+NF+ ++++LAKE+ EI VV DQ G P Sbjct: 122 IYGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKLAKEKGEIDVVNDQRGNP 181 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A+ I ++ G +H+T + G SW DFA I G K Sbjct: 182 TFTKDVVQAVEVIM-------NSEKYGTYHVTNE-GITSWYDFAYKIVSTF----GIDCK 229 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++ A RP S LD L ++ W+E Sbjct: 230 VNPTTSDKFIRPAKRPKNSALDKMMLRLEFGYKMRHWEEAFEEF 273 >gi|325261286|ref|ZP_08128024.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] gi|324032740|gb|EGB94017.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] Length = 295 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 104/300 (34%), Positives = 150/300 (50%), Gaps = 17/300 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + V ++D+ S SPD +I+ AA Sbjct: 1 MKVLVTGVKGQLGYDCVNELTKRGHVAVGVDIEEMDITDAASVNSVVKETSPDAVIHCAA 60 Query: 60 YTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF-S 116 +TAVD AEDE E +NA G +A + +Y+STDYVFDG P + Sbjct: 61 WTAVDAAEDEENREKVRLVNAVGTQNLADVCRDLNCKMLYLSTDYVFDGQGTEPWQPDCT 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KLAGE V+ Y I+R AWV+ G NF+ +ML L K I VV Sbjct: 121 DYKPLSVYGETKLAGELAVSQTLEKYFIVRIAWVFGKNGKNFIKTMLNLGKTHDTIKVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT +A+ ++ + +T G +H T +GG +SW DF + IF ++ E Sbjct: 181 DQIGTPTYTYDLAKLLVDMI-------ETEKYGYYHATNEGGYISWYDFTKEIFRQACEM 233 Query: 237 GG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + T++Y +KA RP S LD SKL + TW++ VR L I Sbjct: 234 GRQEYSEERLNLIPVTTEEYGISKAKRPFNSRLDKSKLTENGFTLLPTWQDAVRRYLQEI 293 >gi|319638377|ref|ZP_07993139.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa C102] gi|317400126|gb|EFV80785.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa C102] Length = 287 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 119/292 (40%), Positives = 167/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDHLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNASAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + +I+RT+W++S +GSNF+ +MLRLAKER +SVV DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESIIIRTSWLFSEYGSNFVKTMLRLAKERDSLSVVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A AII++ TS RGIFH + +W +F + IF + + Sbjct: 181 CPTYAGDLAHAIIELLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAQQLDDSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTDQYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREILRKI 286 >gi|9957846|gb|AAG09523.1|AF279621_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GLTLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|168229418|ref|ZP_02654476.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168259600|ref|ZP_02681573.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466246|ref|ZP_02700116.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194442608|ref|YP_002041366.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194468557|ref|ZP_03074541.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194401271|gb|ACF61493.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194454921|gb|EDX43760.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631278|gb|EDX49838.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205335940|gb|EDZ22704.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205351277|gb|EDZ37908.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 299 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|212550650|ref|YP_002308967.1| dTDP-4-dehydrorhamnose reductase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548888|dbj|BAG83556.1| dTDP-4-dehydrorhamnose reductase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 293 Score = 325 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 115/287 (40%), Positives = 160/287 (55%), Gaps = 7/287 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G GQ+ L+ + Q E I +DL K+ F D IIN AAY Sbjct: 5 VLVTGAKGQLGCELTKVFTQHSEFNFIPTDIDTLDLTNKKEVIHFVKKHKIDYIINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E ++ + IN + I +AA I+IST+YVFDG+ TP E TNP Sbjct: 65 TAVDKAEEEIDLCYLINRDAVKNIVEAAARGKAKIIHISTNYVFDGVKNTPYIETDITNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YGKSKL GE + +I+RT+W+YSI+G NF+ +LRL KE+ EI+VVCDQ G Sbjct: 125 QSVYGKSKLEGENTLMKNCPESIIIRTSWLYSIYGYNFVKKILRLIKEKSEINVVCDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A I+ + L + + GIFH + + G VSW DFA+ I S + Sbjct: 185 TPTFAPDLANTILVLITFL-KKTKNFHSGIFHYSNE-GIVSWFDFAKKILQLSETK---N 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T+QYP +A RP YS L+ K+ +I I W+ ++ + Sbjct: 240 CKIRPITTEQYPIRAKRPFYSALNKKKIKKAFDIVIPNWEVSLKKCI 286 >gi|330975552|gb|EGH75618.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 301 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGRCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEQQWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG+SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 AATGPLSVYGRSKLKGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H + + + + GI+H+ A G SW FA+++ +A Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAA 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YP A RP S L SKL +++ +W++G + +L I Sbjct: 240 LNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDEI 299 >gi|295792734|gb|ADG29297.1| putative dTDP-4-dehydrorhamnose reductase [Paenibacillus alvei] Length = 286 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 97/288 (33%), Positives = 155/288 (53%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + + + E++ + R +D+ K + PD I++ AA Sbjct: 1 MKILITGANGQLGMDVLRLFSKKGHEVVGLNRTQLDITDEKLCSDTITELKPDTILHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + + A+ +NA G IA AA+ + YISTDYVFDG + +P E+ TN Sbjct: 61 YTAVDNAEKDIDSAYLVNAIGTRNIAAAAERVKAKVCYISTDYVFDGTNTSPYYEYDNTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSK AGE+ V + + I+RT+WVY G+NF+ +M++L KE + VV DQ+ Sbjct: 121 PLTVYGKSKRAGEQLVQFLCSRWFIVRTSWVYGATGTNFVNTMVKLGKECDCLQVVNDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + ++ + GI+H ++ G +W +FA+ IF S Sbjct: 181 GSPTYTWDLALFLEKLVA-------SEKYGIYH-ASNTGICTWYEFAQAIFELS----NI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V T+Q+ A RP YS ++ + + +W+E ++ + Sbjct: 229 PVIVEPCTTEQFQRPATRPRYSAMESMAIRVNGFDPLRSWREALKEYI 276 >gi|323968174|gb|EGB63583.1| RmlD substrate binding domain-containing protein [Escherichia coli M863] gi|327253172|gb|EGE64826.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli STEC_7v] Length = 299 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGSWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|109898446|ref|YP_661701.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas atlantica T6c] gi|109700727|gb|ABG40647.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas atlantica T6c] Length = 286 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 10/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + VE+ ++D+ K A F S P+V+IN AA Sbjct: 1 MKVLITGKKGQLGWELCNRAPEPTVEVFAFDSAELDITDAKKVAEIFSSIQPNVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + AF +N EGA IA +G ++ISTD+VFDG +P N Sbjct: 61 YTAVDKAETDEATAFLVNEEGAKNIANGCKEVGARLLHISTDFVFDGTKCSPYIVSDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE + S +I+RTAWVYS G+NF+ +MLRL +E+ ++ +V DQ Sbjct: 121 PLGVYGASKLAGELAIQSMLPEAIIVRTAWVYSSHGNNFVKTMLRLMQEKSQLGIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 GTPT A +A + + ++G++H T D G SW DFA I + E+G Sbjct: 181 GTPTYAAGLADWLWAVVDK------PDIKGMYHWT-DAGVASWYDFAIAIQELALEKGLL 233 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I+ QYPT A RPA+S +D + ++ W++ + N+L N+ Sbjct: 234 HKAISVQPIYAAQYPTPAKRPAFSVVDKTAAEQDSGVQTVHWRKQLSNMLDNL 286 >gi|323936934|gb|EGB33217.1| RmlD substrate binding domain-containing protein [Escherichia coli E1520] Length = 299 Score = 325 bits (835), Expect = 4e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIALALHKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|191167706|ref|ZP_03029514.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B7A] gi|76366003|gb|ABA42228.1| RmlD [Escherichia coli] gi|190902219|gb|EDV61960.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli B7A] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNCDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQLGVKRMLNEL 293 >gi|56413000|ref|YP_150075.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361928|ref|YP_002141565.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127257|gb|AAV76763.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093405|emb|CAR58860.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|300853757|ref|YP_003778741.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] gi|300433872|gb|ADK13639.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] Length = 294 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 161/303 (53%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+A L + V D E+ R ++D+ K D F Sbjct: 1 MKILITGGKGQLAGQLREILVMGKSKIRALDKIYSDAEVKFTSREELDITKLNDVRDFMA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 ++PD+I+N AAYT VDK E + E AF +N+ GA +A A+ + ++ISTDYVF+G Sbjct: 61 DYTPDIIVNCAAYTNVDKCEIDFENAFKVNSLGARNLALASQNTKTKLVHISTDYVFNGR 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E +P+++YGK+KL GE+ + + Y I+RT+W+Y ++G NF+ ++L++AK Sbjct: 121 GAIPFRECDLPDPISVYGKTKLLGEQYIRENCSRYFIVRTSWLYGLYGKNFVYTILKVAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ + VV DQ G PT+A +A ++++A T GI+H + G SW DFA Sbjct: 181 EKGHLDVVNDQRGNPTNAEDLAYHLLKLAL-------TCEYGIYHCSGK-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V + +++ A RP +S LD L T + WK+ +++ + Sbjct: 233 KIVEYA----GIDCTVSPMTSEKLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALKSFI 288 Query: 288 VNI 290 + Sbjct: 289 KKL 291 >gi|183597262|ref|ZP_02958755.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827] gi|188023577|gb|EDU61617.1| hypothetical protein PROSTU_00506 [Providencia stuartii ATCC 25827] Length = 297 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 165/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L + E+I + R DL K D A PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRALLPLGELIALDRHSKDYCGDLSKLNDLAETIELLQPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EP+++ IN+E +A+ A+ + I+ STDYVF G +E Sbjct: 61 AAAYTAVDKAESEPDVSKLINSEAVKILAQCAEKVNALLIHYSTDYVFSGEGEHFWNEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+ LNIYG++KL GE+ + Y N++ILRT+WVYS FG+NF ++L LAK R ++S++ Sbjct: 121 QTSALNIYGQTKLEGEQYIQKYCPNHLILRTSWVYSTFGNNFAKTILNLAKNREKLSIIS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PTSA IA ++ + GI+H+ A G +W ++A+ I E+ + Sbjct: 181 DQYGAPTSAALIADCTAIALVKTLQQKEK--CGIYHLVA-SGETNWYEYAKLITEEAKKN 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I +YP A RP S ++ SK + NI + WK GV ++ I Sbjct: 238 NIKLSLNEINPISATEYPLPAKRPYNSRMNSSKFKKSFNIELPDWKIGVIRLIKEI 293 >gi|9957856|gb|AAG09531.1|AF279623_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNGPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A IF E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALIFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|170698772|ref|ZP_02889836.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170136329|gb|EDT04593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 300 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 145/292 (49%), Gaps = 8/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL +F P +I+NPAAYTA Sbjct: 12 ILVTGVNGQVGFELLRSLQGLGRVVPCDRSTLDLSDLDRVRAFVRDLKPSLIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E + A +NA+ A+ G I+ STDYVFDG E NP+N Sbjct: 72 VDKAETEVDAARRLNADVPRIFAEELARTGGALIHYSTDYVFDGTKAGAYTETDAPNPVN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L KER E+ VV DQ G P Sbjct: 132 AYGATKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGKERPELRVVADQVGAP 191 Query: 183 TSALQIARAIIQIA-----HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 T A IA I + + + G++H T+ G SW FA+ I + G Sbjct: 192 TWARTIAVVTSHIIAQQAAADDVADWWAKRSGVYHFTS-SGATSWHGFAQAILEHA--MG 248 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV I +YP A RPA S + KLA T + + W + +R L Sbjct: 249 ELAPKVLPIPASEYPVPAKRPANSRMALEKLARTFGVTMPAWDDALRLCLGE 300 >gi|29345875|ref|NP_809378.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|29337768|gb|AAO75572.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] Length = 284 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 10/288 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + I ++D+ + + VI+N AA Sbjct: 1 MNILVTGANGQLGNEMRCIAATSLNNYIFTDVAELDITDLDAIRNMIHLDNIKVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ ++A +N + +A AA + I+ISTDYVF G P E TN Sbjct: 61 YTNVDKAEDDYDMADLLNNKAVENLAIAAKEVNATLIHISTDYVFQGDKNMPCGEDCETN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL IYGK+K AGE+ + NY+I RTAW+YS FG NF+ +M +L ++ ++ VV DQ Sbjct: 121 PLGIYGKTKRAGEQSIQRVGCNYLIFRTAWLYSQFGKNFVKTMRQLTADKDKLRVVFDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A + I + +IE +GI+H + + G SW DFA+ I S G Sbjct: 181 GTPTYAKD----LADIIYRVIEGDQYHKQGIYHFSNE-GVCSWYDFAKEICELS----GN 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + ++P+K RP +S LD +KL + I WK+ + + Sbjct: 232 SCDIQPCHSDEFPSKVKRPHFSVLDKTKLKLAFGVEIPYWKDSLVKCI 279 >gi|168818215|ref|ZP_02830215.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205345064|gb|EDZ31828.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320086528|emb|CBY96299.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|16761028|ref|NP_456645.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141276|ref|NP_804618.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213419658|ref|ZP_03352724.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425546|ref|ZP_03358296.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213650450|ref|ZP_03380503.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|289827041|ref|ZP_06545849.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25291468|pir||AE0767 dTDP-4-dehydrorhamnose reductase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503326|emb|CAD02459.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi] gi|29136902|gb|AAO68467.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVTLNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|224184716|gb|ACN39589.1| putative dTDP-4-dehydrorhamnose reductase [Capnocytophaga canimorsus] Length = 284 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 108/286 (37%), Positives = 158/286 (55%), Gaps = 11/286 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + ++ + G D+D+ + + F + +++N A Sbjct: 6 MKNILVTGANGQLGSEIQNIQGKTKNYFFTGASDLDITDRQAISDFVKKNNIQIVVNCAG 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAED+ + A IN G +A+ I+ISTDYVF G TP E PT Sbjct: 66 YTNVDKAEDDIQTANLINNIAVGYLAEVCKENNASLIHISTDYVFGGTKNTPYSEADPTE 125 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQ 178 PL IYG++KL GE+ + + +Y+I+RT+W+YS+ FG+NF+ ++ RL+ ER E+ VV DQ Sbjct: 126 PLGIYGRTKLEGEKAIQNADIDYLIIRTSWLYSLSFGNNFVKTIQRLSSERNELKVVFDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A I+ I + R ++H + + G SW DFA I S G Sbjct: 186 VGTPTNARDLAAFIVHIIEKDLYKR----REVYHFSNE-GVCSWFDFAAEIVRMS----G 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 V + ++P+K RP+YS LD SKL N N IS WKE ++ Sbjct: 237 NDCLVKPCLSSEFPSKVKRPSYSVLDKSKLKNDFNYTISHWKEALK 282 >gi|330967439|gb|EGH67699.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 301 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLGGLTVTIRTLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVALLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLAAERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA I ++ + D +L GI+H+ A G SW FA + + Sbjct: 181 ADQYGAPTGAELIADVTAHILRRVLGDQDSAALAGIYHLAA-AGETSWHGFARLVLEHAE 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV I T+ YP A RP S L KL T +++ W++G + +L I Sbjct: 240 RNGVALKVSADKVGAIATEAYPLPAPRPHNSRLALGKLETTFQLKMPPWQQGAQRMLDEI 299 >gi|168236254|ref|ZP_02661312.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734178|ref|YP_002115185.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194709680|gb|ACF88901.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290512|gb|EDY29867.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 299 Score = 325 bits (834), Expect = 4e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|88802243|ref|ZP_01117770.1| dTDP-4-dehydrorhamnose reductase [Polaribacter irgensii 23-P] gi|88781101|gb|EAR12279.1| dTDP-4-dehydrorhamnose reductase [Polaribacter irgensii 23-P] Length = 291 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 156/292 (53%), Gaps = 7/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+NGQ++ + + ++ ++D+ F + +IN A Sbjct: 1 MNILVTGSNGQLSSEIKDIAADYKNFNFFFTSSLELDICNSSQVNIFINENNIHTVINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + E+A +N+EG + A +G I+ISTDYVFDG P E Sbjct: 61 AYTAVDKAEQDAEVAEKVNSEGVQNLVNAIAKVGGKLIHISTDYVFDGNGFLPYQESDKV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ +YG +K +GE V + + +++RT+W+YS +G+NF+ +MLRL ER E+ V+ DQ Sbjct: 121 NPIGVYGNTKRSGELAVFNSDIDGIVIRTSWLYSAYGNNFVKTMLRLGNERDELGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A+ + I E + S ++H + + G SW DFA I + G Sbjct: 181 VGTPTNASDLAKTCLDILSYDKETNINSKGNMYHFSNE-GVASWYDFAVAIM----KLGN 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I TK YPT A RP +S L+ SK+ I I W++ + + + Sbjct: 236 VDCKVKPIETKDYPTPAKRPHFSVLNKSKIKTDFEIEIPYWRDSLATCISKL 287 >gi|313201255|ref|YP_004039913.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688] gi|312440571|gb|ADQ84677.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. MP688] Length = 301 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 118/295 (40%), Positives = 165/295 (55%), Gaps = 14/295 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ +L M + + R +DL + PDVI+NPAAYT Sbjct: 5 RILLTGVHGQVGHALLPMLATWGTVTALDRAALDLSDEAAIRKTVRTLRPDVIVNPAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A++INAE +A+ A +G ++ STDYVFDG + P E TNPL Sbjct: 65 AVDKAETEPELAYAINAEAPRILAEEAAELGARMVHYSTDYVFDGRASKPYRETDMTNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+ V ++ILRT+WVY +G NFL ++LRLA+ER + +V DQ G Sbjct: 125 GVYGASKLAGEQAVQQAGAQHLILRTSWVYGAYGKNFLHTILRLARERDSLGIVADQLGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW----ESAERG 237 PTS+ IA A + L+++ GI+H+T + G SW FA I AERG Sbjct: 185 PTSSHDIASATL----TLLKSWQPERSGIYHLT-NSGYTSWHGFAVAILQAYEGLQAERG 239 Query: 238 GPYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + V I T +YPT A RPA S LD L +R+ W++ + ++ Sbjct: 240 WPPLRVSSEAVRAITTAEYPTPAARPANSRLDGDLLEQDWGLRLQDWRQALVQVM 294 >gi|148549140|ref|YP_001269242.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] gi|148513198|gb|ABQ80058.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] Length = 301 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G +GQ+ L V EI+ +GR + DL + +P Sbjct: 1 MKVLLLGKDGQVGWELQRALVVMGEIVALGRNPVSTSYGTLSGDLSDLDGLRQTIRAVAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+I+N AAYTAVDKAE E E+A +NA +G IA+ A + ++ STDYVFDG +P Sbjct: 61 DLIVNAAAYTAVDKAETEQELARKVNALASGVIAEEAKRLDALFVHYSTDYVFDGAGTSP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + NY+I RT+WVY+ G+NF +MLRLAKER+ Sbjct: 121 WKESDSVSPVNYYGATKLEGEQLIVASGCNYLIFRTSWVYAAKGNNFAKTMLRLAKERQT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PTSA +A + + N SL GI+H+ A G SW +A Y+ Sbjct: 181 LNVIADQIGVPTSAELLADVAVHAVQKTLNN--PSLCGIYHL-APAGETSWHAYATYVIA 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A+RP S LD +KL + +++ WK GV +L+ Sbjct: 238 SARAHGEPLAVETINPIATTEYPTPANRPLNSRLDTTKLRDAFALQLPDWKVGVTRMLME 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|197249923|ref|YP_002147054.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197213626|gb|ACH51023.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 299 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLISLDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|77164294|ref|YP_342819.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707] gi|254434601|ref|ZP_05048109.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27] gi|76882608|gb|ABA57289.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani ATCC 19707] gi|207090934|gb|EDZ68205.1| dTDP-4-dehydrorhamnose reductase [Nitrosococcus oceani AFC27] Length = 295 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 156/289 (53%), Gaps = 4/289 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG GQ+ L E+ GR +DL + P +I+N AAYT Sbjct: 7 RILLIGATGQVGWELQRTLAPLGEVFAPGRERLDLAQLDSIRPCLAETQPALIVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+EPE A +IN + G +A+ A G I+ STDYVFDG P E PL Sbjct: 67 AVDKAEEEPEQALAINGKAPGVLAETARQQGAAFIHYSTDYVFDGKKAAPYRESDTPRPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KL GE+ + + Y+ILRT+WVY + G NFLL+M RLA+ER + VV DQ+G Sbjct: 127 NVYGQTKLTGEQAIVAVGGAYLILRTSWVYGLRGHNFLLTMQRLAREREVLRVVDDQWGA 186 Query: 182 PTSALQIARAIIQIAHNLIENSD---TSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + IA QI + GI+H++ G +W FA+ I A+ G Sbjct: 187 PTWSRLIAEGTAQIIAQSWGHRQNYIPLQTGIYHLSC-GEKTTWHGFAQTILTRLAQGAG 245 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +K+ I YPT A RPA+SCLD + +T I++ +W+ + L Sbjct: 246 SVAKLKAISAADYPTAARRPAFSCLDNTLARDTFGIQLPSWRTALELAL 294 >gi|268593348|ref|ZP_06127569.1| dTDP-4-dehydrorhamnose reductase [Providencia rettgeri DSM 1131] gi|291311045|gb|EFE51498.1| dTDP-4-dehydrorhamnose reductase [Providencia rettgeri DSM 1131] Length = 290 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 111/288 (38%), Positives = 163/288 (56%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ GQ+ L + E++ + +D+ F P++IIN AAY Sbjct: 1 MRVLVTGSKGQVGHCLEEQLTNETELLALDSTQLDITDKAAVFRIISEFKPNIIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E + + +IN +G +AKAA IG ++ISTDYVF G P E TNP Sbjct: 61 TAVDRAEQEIKQSENINIKGPEYLAKAAHHIGAAILHISTDYVFGGDKELPYTENDITNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V + ++ILRT+WV+S G+NF+ +ML+LA ER +S+V DQ+G Sbjct: 121 KSVYGQTKLNGEVAVINSCPRHIILRTSWVFSQHGNNFVKTMLQLAAERTNLSIVSDQYG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA +I +A I ++ GI+H + VSW +FA+YIF ++ + Sbjct: 181 GPTDAADIASTLINLAER-IHYNNFEGYGIYHYSG-FPYVSWYEFAQYIFEQATNKKIIL 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K V I T YPT A RP S LD +K+ I S W+ ++ I Sbjct: 239 TKPLVNAIKTTDYPTAAMRPHNSRLDLTKI-QLLGINASNWQLSLQQI 285 >gi|193213369|ref|YP_001999322.1| dTDP-4-dehydrorhamnose reductase [Chlorobaculum parvum NCIB 8327] gi|193086846|gb|ACF12122.1| dTDP-4-dehydrorhamnose reductase [Chlorobaculum parvum NCIB 8327] Length = 291 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 156/292 (53%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L ++ D P++++ F I+N A Sbjct: 1 MNLLVTGSRGQLGSELQALQNAASDHTWHFCDFPELNITDADKVEVFCRDHEIGAIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE EP+ AF +N +GA ++A A ++G +++STDYVFDG + P E P Sbjct: 61 AYTAVDKAESEPDAAFRVNRDGAASLAATAKAVGAHLVHVSTDYVFDGSNHRPYREDDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG+SKL GEE + + ++VI+RT+W+YS G NF+ +MLRL ER +I VV DQ Sbjct: 121 APCGVYGRSKLEGEEAIRASGCSHVIIRTSWLYSAHGQNFVKTMLRLGDEREQIGVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A I+ + L S + + ++ G SW DFA+ I + G Sbjct: 181 VGTPTWAADLAGTIVLMLEQLDPASQYAESFHY---SNEGVCSWYDFAKAIM----DAEG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I + ++PT A RP +S L+ K+ I I W + + +L + Sbjct: 234 LSCKVSPIESWEFPTPAARPHFSVLNKRKIREFLGIEIPHWHDSLLKMLEEL 285 >gi|115503046|gb|ABI98970.1| RmlD [Escherichia coli] gi|187880503|gb|ACD37021.1| RmlD [Shigella boydii] Length = 299 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVGETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEACKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|170732198|ref|YP_001764145.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169815440|gb|ACA90023.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 145/291 (49%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL S P +I+NPAAYTA Sbjct: 7 ILVTGVNGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRVRSVVRELKPSIIVNPAAYTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + + A +NAE A A+ A +G ++ STDYVFDG E TNP N Sbjct: 67 VDKAETDVDAARRLNAEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQN 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G P Sbjct: 127 VYGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAP 186 Query: 183 TSALQIARAIIQIA----HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA A I + G++H T+ G SW FAE IF ++ G Sbjct: 187 TWSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQA--MGE 243 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I YP A RP+ S L KL +R+ W + + L Sbjct: 244 RAPRVLPIPASDYPVPAKRPSNSRLSHDKLTEAFGLRLPDWADALTLCLSE 294 >gi|156539324|gb|ABU80587.1| dTDP-6-deoxy-L-mannose dehydrogenase [Shigella flexneri] gi|156539339|gb|ABU80597.1| dTDP-6-deoxy-L-mannose dehydrogenase [Shigella flexneri] gi|168481276|gb|ACA24768.1| RmlD [Shigella flexneri 6] Length = 299 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAK A+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|213962406|ref|ZP_03390669.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno] gi|213955072|gb|EEB66391.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sputigena Capno] Length = 278 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 100/283 (35%), Positives = 151/283 (53%), Gaps = 9/283 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G NGQ+ + + + +D+ + +F + D+I+N AAY Sbjct: 1 MNVLVTGANGQLGSEIQNNTHRISNYYFSDADSLDITDAQAIRAFVQQHAIDLIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ A +IN +A +P I+ISTDYVF G TP E T P Sbjct: 61 TNVDKAEDDCATAQAINHTAVAHLASVCKEFQLPLIHISTDYVFGGTKNTPYRETDATQP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + + ++I+RT+W+YS+ FG+NF+ ++ RL+ ER ++ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQNSGIEHLIIRTSWLYSLRFGNNFVKTIQRLSSERPQLKVVADQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A I+Q N ++H + + G SW DFA I S G Sbjct: 181 GTPTNAADLANFIVQAIENAWYRGKRE---VYHFSNE-GVCSWYDFAVAIVAAS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 +V + ++P+K RP+YS LD +KL RI W++ Sbjct: 233 ACEVLPCTSAEFPSKVTRPSYSVLDKTKLKTDFGYRIPYWRDS 275 >gi|9957851|gb|AAG09527.1|AF279622_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDSCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|168481392|gb|ACA24874.1| RmlD [Escherichia coli] Length = 299 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|256017787|ref|ZP_05431652.1| dTDP-4-dehydrorhamnose reductase [Shigella sp. D9] gi|332278808|ref|ZP_08391221.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella sp. D9] gi|332101160|gb|EGJ04506.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella sp. D9] Length = 299 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEAEFAQLLNATSVESIAKAANEVGAWVIHFSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|222109770|ref|YP_002552034.1| dtdp-4-dehydrorhamnose reductase [Acidovorax ebreus TPSY] gi|221729214|gb|ACM32034.1| dTDP-4-dehydrorhamnose reductase [Acidovorax ebreus TPSY] Length = 296 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 101/298 (33%), Positives = 153/298 (51%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L++G +GQ+ L + + D P+ + PDVI+N Sbjct: 1 MNILLLGKSGQVGWELQRSLAVLGRVTALDHDSTEHCGDFANPEGVRETVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPEIA +NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPEIARLLNATTPGVLAEEAARLGTWLVHYSTDYVFDGSGTRPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG +KL GE+++ ++ILRT+WVY+ G NF +MLRL ER ++V+ Sbjct: 121 APAPLSVYGATKLEGEQRIQQTGCRHLILRTSWVYAARGGNFAKTMLRLGSERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A +L S G++H A G +W +A+Y+ + + Sbjct: 181 DQWGAPTGADLLADVTAHAVRHL--QSRPGDGGLYHCVA-SGETNWHSYAKYVLEHARQA 237 Query: 237 G----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V + T +PT A RP S LD ++L T + + W++GV +L I Sbjct: 238 QPAIELKATEVAPVPTSAFPTPARRPHNSRLDTTRLQTTFGLVLPPWQQGVARMLTEI 295 >gi|198275010|ref|ZP_03207542.1| hypothetical protein BACPLE_01169 [Bacteroides plebeius DSM 17135] gi|198272457|gb|EDY96726.1| hypothetical protein BACPLE_01169 [Bacteroides plebeius DSM 17135] Length = 303 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 98/303 (32%), Positives = 152/303 (50%), Gaps = 17/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD--------IDLLKPKDFASFFLSFSP 51 M LV G NGQ+ + + + + I + +D+ + + Sbjct: 1 MNILVTGANGQLGNEMRLISKEMTDHFIFTDVTEVEGLETTLLDITNLEAVKEVVKTHKV 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 D I+N AAYT VDKAE + + ++NA+ +A A G +++STDYVF G Sbjct: 61 DCIVNCAAYTNVDKAETDVDFCRTLNAKAPQNLAIAMKEAGGLLVHVSTDYVFGGDPYNI 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E P +YG +KL GEE + + +YVI+RTAW+YS FG NF+ +ML L + Sbjct: 121 PCREDQKGTPTGVYGLTKLEGEENIKAAGCDYVIIRTAWLYSEFGKNFVKTMLNLTATKP 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAE 227 ++ VV DQ GTPT A +A+AI + + + S GI+H + + G SW DF + Sbjct: 181 QLKVVFDQAGTPTYAYDLAKAIEVVLKDYTKEQPASAYSKTGIYHFSNE-GVCSWYDFTK 239 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I +A G + + ++P+ RPAYS LD +K+ T IRI W + ++ + Sbjct: 240 TI---AAMAGHMECDIQPCHSNEFPSPVKRPAYSVLDKTKIKETFGIRIPYWTDSLKVCI 296 Query: 288 VNI 290 N+ Sbjct: 297 ENL 299 >gi|83582779|ref|YP_425085.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] gi|83578095|gb|ABC24645.1| dTDP-4-dehydrorhamnose reductase [Rhodospirillum rubrum ATCC 11170] Length = 310 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 160/294 (54%), Gaps = 8/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G GQ+ L++ + + R IDL ++ +IN AAYT Sbjct: 10 VLILG-TGQVGSELAAAKWPSGLVPVVRDRKRIDLSNQGSVSAGVADQPWAFVINAAAYT 68 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE +PE AF++N +G +A+A IP +++STDYVFDG + P E P PL Sbjct: 69 AVDKAETDPEAAFAVNRDGPRWLAEACARAHIPLLHLSTDYVFDGQKQEPYRETDPVAPL 128 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SK AGE + + ++ILRTAWV+S G NF+ +MLRL +ER E+ VV DQ+G Sbjct: 129 GVYGASKEAGEAALRAVWERHIILRTAWVFSAHGHNFVKTMLRLGRERDELRVVADQYGC 188 Query: 182 PTSALQIARAIIQIAHNLIEN-----SDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 PT+A IA +II I L ++ G +H GP +W A+ + A++ Sbjct: 189 PTAASDIATSIIDIVRQLTDDKPRGGGQREGWGTYHFVG-AGPTTWYGLADAVMAGLAKQ 247 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V I T QYPT A RP S LDC+++ IR +W+EG+ +L + Sbjct: 248 EGRRPVVLPITTAQYPTPARRPVNSVLDCTQIEAVFGIRPRSWREGLDEVLQTL 301 >gi|313159019|gb|EFR58394.1| dTDP-4-dehydrorhamnose reductase [Alistipes sp. HGB5] Length = 286 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 156/291 (53%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L+ G NGQ+ +SL + V + ++D+ DVI+N AA Sbjct: 1 MNILITGANGQLGRSLRRLGGVSPHNYLFTDVAELDITDAAAVLRTVEERRIDVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V++AE++ A +N + AG +A AA + G ++STDYVFDG + TP E + Sbjct: 61 YTDVERAEEDEPTAELLNHKAAGNLAAAAKATGATLFHVSTDYVFDGTAHTPYTEDGTPS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL YG++KLAGE V + Y+I RTAW+YS +G+NFL +MLRL ER + VV DQ Sbjct: 121 PLGAYGRTKLAGERAVMASGCRYLIFRTAWLYSEYGNNFLKTMLRLTSERDTLQVVFDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A AI I + G++H T D G SW DFA I +A G Sbjct: 181 GTPTYAGDLALAIFSIIES---ERYAGNEGVYHFT-DEGVCSWYDFATEI---AAAAGHD 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + T ++PTKA RPAYS LD +K+ T + I W+E + L I Sbjct: 234 SCHIIPCHTSEFPTKAARPAYSVLDKTKIKTTFQMDIPHWRESMIYCLKQI 284 >gi|289624736|ref|ZP_06457690.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648650|ref|ZP_06479993.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868865|gb|EGH03574.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 301 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 113/299 (37%), Positives = 166/299 (55%), Gaps = 11/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L ++I + R D L + A+ + +P +++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGDVIALDRQGTDGLCGDLTNLEGLAATVRALAPHIVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE E E+A IN + G +A+ A ++G I+ STDYVF+G P E Sbjct: 61 NAAAYTAVDKAETEQELAMLINGDAPGVLAREAATLGAWLIHYSTDYVFNGSGEKPWYEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++VV Sbjct: 121 GHTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI H ++ + D +L GI+H+ A G SW FA +I + Sbjct: 181 ADQYGAPTGAELIADVTAQILHRVLRDQDSAALAGIYHLAA-AGETSWHGFARFILEHAE 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G K+ I TK YP A RP S L +KL T +++ W++G + +L Sbjct: 240 RSGVQLKVLPDKIGAIPTKAYPLPAPRPNNSRLALNKLETTFQLKMPPWQQGAQRMLDE 298 >gi|91211324|ref|YP_541310.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UTI89] gi|300986907|ref|ZP_07177885.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1] gi|91072898|gb|ABE07779.1| dTDP-4-dehydrorhamnose reductase, subunit of dTDP-L-rhamnose synthetase [Escherichia coli UTI89] gi|288816224|gb|ADC54946.1| RmlD [Escherichia coli] gi|294490643|gb|ADE89399.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli IHE3034] gi|300407836|gb|EFJ91374.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 45-1] gi|307626416|gb|ADN70720.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli UM146] gi|315295250|gb|EFU54585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 153-1] Length = 299 Score = 325 bits (833), Expect = 5e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTVYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|73540419|ref|YP_294939.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] gi|72117832|gb|AAZ60095.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha JMP134] Length = 304 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 114/294 (38%), Positives = 155/294 (52%), Gaps = 7/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ + R DL P PDVI+NPAAYTA Sbjct: 10 LLVTGCNGQVGFELRRSLAPLGNVVALDRSACDLANPDALRRVVRQCRPDVIVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + E+AF+INA AG +A+ A ++G ++ S+DYVFDG E NP + Sbjct: 70 VDKAETDAEVAFAINATAAGILAEEAKALGSLLVHYSSDYVFDGTKDGAYVETDAVNPQS 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGE+ +A+ V+LRT WV G NF +MLRL KER + V+ DQFG P Sbjct: 130 VYGKSKLAGEQAIAATGVQSVVLRTCWVAGAHGGNFAKTMLRLGKERDSLRVIADQFGAP 189 Query: 183 TSALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 T+A IA QI H L + GI+H+ A G +W +A + + G Sbjct: 190 TTASLIADVTAQIVARHWLAGDRQAFANGIYHLAA-AGETTWHGYATEVLRYAKAHGVEL 248 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RP+ S LD ++L T I + WK+GV+ +L I Sbjct: 249 KADPEQIEAIPATAYPLPAPRPSNSRLDTTRLQETFGIHLPDWKQGVQFLLDQI 302 >gi|261380167|ref|ZP_05984740.1| dTDP-4-dehydrorhamnose reductase [Neisseria subflava NJ9703] gi|284797009|gb|EFC52356.1| dTDP-4-dehydrorhamnose reductase [Neisseria subflava NJ9703] Length = 287 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 116/292 (39%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +G+NF+ +ML LAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGNNFVKTMLHLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A AII + TS RGIFH + +W +F + IF + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T+QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTEQYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREILRKI 286 >gi|63033902|gb|AAY28253.1| RmlD [Escherichia coli] Length = 299 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G G + L +I + D P A S PD+I+N Sbjct: 1 MNILLFGKTGHVGWELQRALAPLGNLIALDVHSTDYCGDFSNPDGVAETIRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFSGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 TTAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P S K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLSLNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|2662408|gb|AAC00179.1| putative dTDP-L-rhamnose synthase [Serratia marcescens] Length = 288 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 161/292 (55%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + + + ++ + +D+ ++ PD IIN AAY Sbjct: 1 MRVLLTGAAGQLGRCIIDRFPANWTLVAMDSQQLDIADSAAVSATVEQLVPDAIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A +INA G G +A AA + IP I+ISTDYVFDG S P E +P +P Sbjct: 61 TAVDKAESEPEKARAINAFGPGFLAAAAAKLDIPFIHISTDYVFDGTSSEPYCEETPCSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KL GE V++RTAWV+S +G+NF+ +MLR+ +R E+ VV DQ G Sbjct: 121 KSVYGQTKLEGELAALQANPKTVVIRTAWVFSEYGNNFVKTMLRVGAQRGELGVVSDQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA +I + + GI+H D VSW DF IF E+ Sbjct: 181 CPTYAGDIAATVIAML-----SHPQLPYGIYHYCGDN-AVSWFDFGCAIFREAETSTRYP 234 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K V I T +YPT A RPAYS L SK+ ++ S W++ ++ ++ I Sbjct: 235 HKVSVKPIATHEYPTPASRPAYSILSTSKI-CALALKPSPWEQQLKTVIQKI 285 >gi|192288555|ref|YP_001989160.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris TIE-1] gi|192282304|gb|ACE98684.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris TIE-1] Length = 297 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 142/292 (48%), Positives = 196/292 (67%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G +GQ+AQ+L + EII + RP+IDL +P + ++ PD ++N AA Sbjct: 1 MRIVVTGRHGQVAQALHERAAGTNAEIILLARPEIDLTRPSEIEGVLIALKPDAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE E ++A++INAEGAGA+A+ A +G+P + +STDYVFDG + P E PTN Sbjct: 61 YTAVDQAESEHDLAYAINAEGAGAVARTAAKLGVPMVQLSTDYVFDGTAEQPYRETDPTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG SKLAGE VA ++ +LRT+WVYS FG NF+ +ML LA++R E+ VVCDQ Sbjct: 121 PLSAYGASKLAGERAVAEAAPDHAVLRTSWVYSPFGKNFVRTMLALARQRDEVRVVCDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI-ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PTSAL IA ++ + NL+ E + + +RGIFHMTAD G +WA FAE IF S GG Sbjct: 181 GSPTSALDIADGVLGVVRNLLAEPTRSDMRGIFHMTAD-GTATWAAFAEAIFAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +KV I T +YPT A RP S LD S LA H IR+ W++ ++ + + Sbjct: 240 PSAKVIPIPTTEYPTPAKRPTNSRLDSSALATAHGIRLPHWRQSLQPCIERL 291 >gi|78223675|ref|YP_385422.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15] gi|78194930|gb|ABB32697.1| dTDP-4-dehydrorhamnose reductase [Geobacter metallireducens GS-15] Length = 280 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 109/285 (38%), Positives = 155/285 (54%), Gaps = 15/285 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G G + Q L + D + V +ID+ P+ L+ P V++N AAYT Sbjct: 2 ILVVGAKGMLGQDLMRVLPGD--VRGVDIEEIDITSPESVRRVLLTLKPRVVVNCAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E ++A +N +G G +A A IG + +STDYVFDG TP E NPL+ Sbjct: 60 VDGCETNVDLAMRVNGDGVGHLAAATREIGALLVQVSTDYVFDGTKGTPYVEDDRVNPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKL GE+K +++I+RT W+Y G NF+ +MLRLA ER EI+VV DQ G+P Sbjct: 120 VYGKSKLVGEKKARE-NPDHLIVRTQWLYGHGGKNFVETMLRLAGERTEIAVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T ++ AI ++ N + RG +H A+ G SW +FA IF E+ G Sbjct: 179 TWTADLSLAITELIEN-------NCRGTYH-AANRGTCSWYEFARAIFAEA----GVGMT 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V T++ A RP YS LDC KL + + + W+E ++N L Sbjct: 227 VRPQSTEELGRPAPRPLYSVLDCDKLTHDAGLELEDWREALKNYL 271 >gi|254374809|ref|ZP_04990290.1| hypothetical protein FTDG_00985 [Francisella novicida GA99-3548] gi|151572528|gb|EDN38182.1| hypothetical protein FTDG_00985 [Francisella novicida GA99-3548] Length = 320 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 106/320 (33%), Positives = 154/320 (48%), Gaps = 35/320 (10%) Query: 1 MKCLVIGNNGQIAQSLSSM-------------------------CVQDVEIIRVGRPDID 35 MK LV G NGQ+ L + E I +D Sbjct: 1 MKVLVTGGNGQLGSELRELVNISREIPGQVGNDIVSSHPELDSGSHNSFEYIFTHSKSLD 60 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC 95 + + F + S IIN AAYTAVDKAE + E+A IN + + A + Sbjct: 61 ITDHQAVERFIIDNSIGAIINCAAYTAVDKAESDIEMADKINHLAVVNMVELAKKYSMKL 120 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIF 154 I+ISTDYVFDG + P E TNP ++YG +KLAGE+ + N +I+RT+WVYS + Sbjct: 121 IHISTDYVFDGKNYKPYLETDITNPQSVYGITKLAGEKAIQEINPKNSIIIRTSWVYSYY 180 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG----I 210 G+NF+ +ML L + R + V+ DQ G+PT A +A+ I+ I ++ G I Sbjct: 181 GNNFVKTMLCLGQNRDSLDVIFDQVGSPTYAKDLAKVILDILPAFDKSDSEFDLGSHVEI 240 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 ++ + + G +SW DFA+ I + +V I T YPT A RP YS L+ +K+ Sbjct: 241 YNYSNE-GVLSWYDFAKEIMDIA----NINCQVNPIETAAYPTPAKRPHYSLLNKNKIKE 295 Query: 271 THNIRISTWKEGVRNILVNI 290 I I WK ++ + I Sbjct: 296 DFGISIPYWKVSLKECIDRI 315 >gi|84386902|ref|ZP_00989926.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] gi|84378192|gb|EAP95051.1| dTDP-4-dehydrorhamnose reductase [Vibrio splendidus 12B01] Length = 293 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 116/290 (40%), Positives = 169/290 (58%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G GQ+ L +++ + + R +D+ + F P +IIN A Sbjct: 1 MRILITGCYGQVGSCLIQQLSNNENITVRALDREHLDITNHDAVNAAVAEFEPSIIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVDKAE+E +++++IN +G +A+AA ++G ++ISTDYVF+G E T Sbjct: 61 AHTAVDKAEEEVDLSYAINRDGPKYLAQAAQNVGAAILHISTDYVFEGNKAGEYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP +YG+SKLAGE +VA ++ILRTAWV+ G+NF+ +MLRL + R +S+V DQ Sbjct: 121 NPQGVYGESKLAGEIEVAEACEKHIILRTAWVFGESGNNFVKTMLRLGENRDALSIVGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT A IA A+IQIA I D G++H + VSW DFA IF + E+G Sbjct: 181 FGGPTYAGDIANALIQIAKR-INQGDAVEYGVYHYSG-LPHVSWFDFANAIFDVAVEQGV 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +K + I T QYPT A RP+ S L K+ +++ S WK G+ NI Sbjct: 239 LANKPSLTSITTDQYPTPAKRPSNSRLSTEKITLGFSVKASDWKAGLNNI 288 >gi|325830486|ref|ZP_08163941.1| dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] gi|325487468|gb|EGC89908.1| dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] Length = 302 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 29/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + EI+ ++D+ ++ Sbjct: 3 MRILVTGGNGQLGNELQRILREGRSEIGPIPDAYAGAEIVAADVDELDVTDADAVMAYVA 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA+++G + +STDYVF G Sbjct: 63 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAVGAKLVQVSTDYVFPGT 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + + ++RTAW+Y G NF+ +M+RL Sbjct: 123 EPEPRVEDDPTGPVSAYGRTKLAGEERSLAACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFAE Sbjct: 183 DRDEVTVVDDQLGNPTSANDLAHEILKIA-------STEDYGVYHCTNE-GTCSWADFAE 234 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + + G V R +++Y P A RPAYS L +L +T + W++ + Sbjct: 235 AVMEGA----GLDCAVIRCTSEEYAAMNPASAKRPAYSSLRNKRLEDTVGNEMRPWRDAL 290 Query: 284 RNILVNI 290 L N+ Sbjct: 291 SAYLNNL 297 >gi|189347268|ref|YP_001943797.1| dTDP-4-dehydrorhamnose reductase [Chlorobium limicola DSM 245] gi|189341415|gb|ACD90818.1| dTDP-4-dehydrorhamnose reductase [Chlorobium limicola DSM 245] Length = 297 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 151/290 (52%), Gaps = 9/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G NGQ+ S+ V D P++D+ + IIN A Sbjct: 6 MNILVTGGNGQLGSSIRERIVSYPDWRFSFYDLPELDITSEEQVEDAVRRTECGAIINCA 65 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + + A+ +N +GAG +A A + G ++ISTDYVFDG S P E Sbjct: 66 AYTAVDKAETDHDPAYRVNRDGAGVLAACAKACGALLVHISTDYVFDGSSCRPYTESDTP 125 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG+SKL GE+ + +Y+I+RT+W+YS++G NFL +MLRL ER ++ VV DQ Sbjct: 126 APLGVYGRSKLEGEQLIREIAPSYLIIRTSWLYSLYGQNFLKTMLRLGAERDQLDVVFDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A AI+ I G++H + + G SW DFA I Sbjct: 186 AGTPTCADDLADAILAILAK--AEPGKQYAGLYHYSNE-GVCSWYDFATAIM----RLKQ 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V I + YPT A RPAYS L+ + + I W + + + L Sbjct: 239 FPCRVRPIESSGYPTPAPRPAYSVLNKGAIKTDWGLDIPHWYDTLADCLT 288 >gi|260881231|ref|ZP_05403950.2| dTDP-4-dehydrorhamnose reductase [Mitsuokella multacida DSM 20544] gi|260849345|gb|EEX69352.1| dTDP-4-dehydrorhamnose reductase [Mitsuokella multacida DSM 20544] Length = 335 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 149/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + + + +E+ V D L K ++ P+ +I+ AA Sbjct: 45 MRVLVTGVTGQLGHDCVVELKDRGMEVRGVSSKDFPLTDAKAMRRVMAAYKPNCVIHCAA 104 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AED+ ++NAEG +AK +YISTDYVF G P + +P Sbjct: 105 YTAVDRAEDDEAACMAVNAEGTANLAKLCREFHAKMVYISTDYVFPGDGDAPYETDAPKG 164 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YGKSKL GEE + S Y I+R +WV+ I G NF+ +MLRL + +++VV DQ Sbjct: 165 PQNVYGKSKLMGEEAIQSILKRYFIVRISWVFGINGKNFIRTMLRLGESHAKLTVVDDQV 224 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT ++ + + T G++H T + G SWA+ A +F ++ G Sbjct: 225 GSPTYTRDLSVLLADMIQ-------TERYGVYHATNE-GFCSWAELAAEVFRQA----GM 272 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + YPT+A RP S + + L + W++ V L+ + Sbjct: 273 PVEVTPVPSSAYPTRAVRPKNSRMSKNSLTEAGFALLPRWQDAVGRYLIEL 323 >gi|54873718|gb|AAV41067.1| RmlD [Shigella boydii] gi|72003792|gb|AAZ65832.1| putative dTDP-4-dyhydrorhamnose reductase [Escherichia coli] gi|115503036|gb|ABI98961.1| RmlD [Escherichia coli] gi|332343821|gb|AEE57155.1| dTDP-4-dehydrorhamnose reductase RfbD [Escherichia coli UMNK88] Length = 299 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ E Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWYDYAALVFEEAREA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S LD K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTLARRPHNSRLDTEKFQQNFALVLPDWQIGVKRMLNEL 293 >gi|228474074|ref|ZP_04058815.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga gingivalis ATCC 33624] gi|228274588|gb|EEK13429.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga gingivalis ATCC 33624] Length = 289 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 156/292 (53%), Gaps = 11/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G +GQ+A + V I + ++D+ +FF +++IN Sbjct: 1 MKNILVTGASGQLALEIKQELHNSVSNHYIFTTKNELDVTDAAAIKAFFKKNEIELVINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V+ +E + E A +N IA A G CI++STDYVF G TP E Sbjct: 61 AAYTNVNGSEIDKETANLVNHLAVKNIANACTEQGSACIHLSTDYVFAGEKNTPYTETDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T+PL YG++KL GE + +++ILRT+W+YS FG+NF+ ++LRL+KER+EI VV D Sbjct: 121 TSPLGAYGQTKLLGESALQHSDIDFLILRTSWLYSAFGNNFVKNILRLSKERKEIKVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q TPT A +AR II + N + ++H + + G SW DFA + Sbjct: 181 QVSTPTYAKDLARFIIFVIENKLYRGRQD---VYHFSNE-GVCSWFDFAVETLRLA---- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G KV T ++PT A RPAYS LD SK+ N I W++ + ++ N Sbjct: 233 GSDCKVIPCKTHEFPTPAARPAYSVLDKSKIKTDFNFPIPYWRDSLIALMTN 284 >gi|9957861|gb|AAG09535.1|AF279624_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQCNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|82543418|ref|YP_407365.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii Sb227] gi|16611724|gb|AAL27311.1|AF402312_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] gi|81244829|gb|ABB65537.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii Sb227] gi|167410110|gb|ABZ79714.1| RmlD [Escherichia coli] gi|332097187|gb|EGJ02170.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii 3594-74] Length = 299 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D + A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNSEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S LD K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLDTEKFQQNFALVLPDWQIGVKRMLNEL 293 >gi|71907371|ref|YP_284958.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] gi|71846992|gb|AAZ46488.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] Length = 320 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 157/295 (53%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ L +++ GR DL S P VI+N AY Sbjct: 18 MKILLLGKDGQVGWQLQRSLAPHGDVVACGRAQCDLSDLAQIRSVVRETRPSVIVNATAY 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A INA+ G +A+ A + ++ STDYV+DG + E T P Sbjct: 78 TAVDKAESEPELARRINADAPGVLAEEAAQLNALLVHYSTDYVYDGAKASAYLETDVTAP 137 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++KLAGEE + + +I RT+WV+ G NF+ ++LRLA+E+ ++VV DQ G Sbjct: 138 QSVYGRTKLAGEEAIRAAGGKSLIFRTSWVFGARGGNFVKTILRLAREKESLNVVADQIG 197 Query: 181 TPTSALQIARA--IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT A IA I + + S ++H+ A PVSW DFA I + + G Sbjct: 198 SPTPAALIATVTGIALAMLQHGKLLEKSESRLYHLAASR-PVSWCDFARTIVGLAGQAPG 256 Query: 239 PYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + I T +YPT A RPA S LDC +L N +++ W+ + +L Sbjct: 257 FDLRLKSGAIQAISTAEYPTPACRPANSRLDCGRLENDFGLQMPDWQPYLERMLQ 311 >gi|241758736|ref|ZP_04756849.1| dTDP-4-dehydrorhamnose reductase [Neisseria flavescens SK114] gi|241320944|gb|EER57157.1| dTDP-4-dehydrorhamnose reductase [Neisseria flavescens SK114] Length = 287 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 119/292 (40%), Positives = 165/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF+INA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAINATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +GSNF+ +MLRLAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGSNFVKTMLRLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A AII + TS RGIFH + +W +F + IF + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T QYP A RPAYS +DCS+L I+ S W++ +R IL I Sbjct: 235 RIPELNAITTDQYPLPAPRPAYSIMDCSRLETKFGIKPSDWQKALREILRTI 286 >gi|16611767|gb|AAL27348.1|AF402315_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] Length = 299 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF+ +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFVKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T Y T A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYTTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|324114027|gb|EGC08000.1| RmlD substrate binding domain-containing protein [Escherichia fergusonii B253] Length = 299 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDIHSTEYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTIAYPTPACRPHNSRLNTEKFQHNFALVLPDWQVGVKRMLNEL 293 >gi|168481377|gb|ACA24860.1| RmlD [Shigella dysenteriae] Length = 299 Score = 324 bits (832), Expect = 7e-87, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P N+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPRNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|203285009|gb|ACH97128.1| RmlD [Escherichia coli] Length = 299 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLKAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|319784645|ref|YP_004144121.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170533|gb|ADV14071.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 295 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 137/292 (46%), Positives = 191/292 (65%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G +GQ+A SL ++ VE+I +GRP +DL +P + PD++++ A Sbjct: 1 MRLVVTGRDGQVAASLLEAAQAAAGVEVIAIGRPQLDLARPDTVIEAIAAVKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP++AF++NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 AYTAVDQAEDEPDLAFAVNAVGAGKVAQAAALLGVPVIHLSTDYVFDGTAHGAYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE+ VAS ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ Sbjct: 121 APRSVYGASKLAGEQAVASANPRHLILRTAWVYSPFGKNFVKTMLRLAADRDEISVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA I +A +L + + G++H+ D G +WA+FA+ +F S ERG Sbjct: 181 WGNPTSALDIADGIFHMARHLKADLKFAEWGVYHVAGD-GDTNWAEFAQRVFVTSLERGR 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 PY+ V I T YPTKA RPA S L+C K+A T R +W ++ + Sbjct: 240 PYAAVRGISTSDYPTKAKRPANSRLNCGKMAATFGWRCRSWYTACDEVVERL 291 >gi|199599664|ref|ZP_03213039.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus HN001] gi|258508991|ref|YP_003171742.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] gi|199589439|gb|EDY97570.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus HN001] gi|257148918|emb|CAR87891.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] gi|259650284|dbj|BAI42446.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus GG] Length = 280 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 150/290 (51%), Gaps = 16/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + PDV+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGITYRATDAKDLDITDEAAVNQYFADYQPDVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + +N +G +AKAA + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKALNQLVNVDGTRNLAKAAAKVDATLVYISTDYVFDGDSKEIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDQHLD------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + + +YP KA RP +S LD SK T I TW++ +++ L Sbjct: 228 KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKDFLK 276 >gi|148265298|ref|YP_001232004.1| dTDP-4-dehydrorhamnose reductase [Geobacter uraniireducens Rf4] gi|146398798|gb|ABQ27431.1| dTDP-4-dehydrorhamnose reductase [Geobacter uraniireducens Rf4] Length = 276 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 107/285 (37%), Positives = 152/285 (53%), Gaps = 15/285 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G G + Q L ++ E V DID+ + ++ P V+IN AAYT Sbjct: 2 ILVVGAKGMLGQDLMTLL--GTEARGVDIEDIDITSMESVQKVLVTLKPRVVINAAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E E+A +N EG +A + IG + ISTDYVFDG +P E P PL+ Sbjct: 60 VDGCESNQELAMQVNGEGVAHLALISKEIGAKLVQISTDYVFDGGKGSPYLEDDPPRPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAGE + +++I+RT W+Y + G NF+ +MLRLA E++E+SVV DQ G+P Sbjct: 120 VYGESKLAGEMNAC-FNPDHLIVRTQWLYGLHGKNFVETMLRLAAEKKELSVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + ++ AI + D G +H A+GG SW +FA IF E+ G Sbjct: 179 TWTVDLSLAIKALI-------DKGCCGTYH-AANGGFCSWNEFARVIFAEA----GMGIT 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T + A RP YS LDC KL + W+E ++N L Sbjct: 227 VNPMSTAELGRPAPRPLYSTLDCGKLNRDAGFQPQPWQEALKNYL 271 >gi|307728806|ref|YP_003906030.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] gi|307583341|gb|ADN56739.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] Length = 297 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 111/298 (37%), Positives = 156/298 (52%), Gaps = 13/298 (4%) Query: 1 MK------CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 MK L+ G NGQ+ L+ +I ++DL + P +I Sbjct: 1 MKASAQRTILLTGVNGQVGFELARSLQGLGTVIAPRSNELDLSDLEQVRRVVREMKPSLI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +NPAAYTAVDKAE + + A +NAE +A+ A +G ++ STDYVFDG E Sbjct: 61 VNPAAYTAVDKAETDVDAAMRLNAEAPAVLAEEAKRLGAALVHYSTDYVFDGAKDGAYVE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 NP+N+YG+SKLAGE+ +++ ++I RT+WVY + G NFLL+MLRL ER E+SV Sbjct: 121 GDRVNPINVYGRSKLAGEQAISAVGGAHLIFRTSWVYGMRGKNFLLTMLRLGAEREELSV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIF 230 V DQ G PT + IA + + I + S G++H+T+ GG SW FAE IF Sbjct: 181 VADQLGAPTWSNTIATSTAHVLSQAIASDGESWWREHSGVYHLTS-GGATSWHGFAEAIF 239 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 S P V + YPT A RPA S + KLA +R W+E ++ + Sbjct: 240 EVSNLARKPV--VKPVPASAYPTPASRPANSSMSNDKLAAAFGVRAPDWREALQLCMA 295 >gi|16588695|gb|AAL26873.1|AF315583_2 dTDP-rhamnose synthetase [Acinetobacter calcoaceticus] Length = 297 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 110/297 (37%), Positives = 161/297 (54%), Gaps = 10/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R + D+ +P+ + L+ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRHGLNGLSGDMTQPQAISDTILAVQPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE E E+A +N + A+AKA + ++ STDYVFDG+ T E Sbjct: 61 NASAYTAVDLAETERELADVVNHQTVMAVAKACQHVNALFVHYSTDYVFDGVGETAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YGK+K GE+ + Y+I RT+WVY+ G NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNVYGKTKALGEQAIVQSGCQYLIFRTSWVYASKGKNFLKTMLGLAQQREELSII 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PTSA IA + D S G +H+ A G SW +A ++F + Sbjct: 181 ADQIGAPTSAELIADVTAHAIPQTLT--DKSKVGTYHLVA-SGETSWFGYASFVFEQVRA 237 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V I T YPT A RP S L+ K+ +T I + W++GV+ LV + Sbjct: 238 FGQALTIQNVNAIPTSAYPTPATRPHNSRLNNQKIQHTFGILLPNWQDGVKRALVEL 294 >gi|119357789|ref|YP_912433.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM 266] gi|119355138|gb|ABL66009.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeobacteroides DSM 266] Length = 290 Score = 324 bits (832), Expect = 8e-87, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 153/290 (52%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M LV G NGQ+ L +D PD+D+ + + +VI+N Sbjct: 1 MNILVTGGNGQLGSEL-RSLQRDYPAWMFCFCDLPDLDITDSNAVDALMRTCKCNVIVNC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE EP A+ +N +GAG +A A + I+ISTDYVFDG S P E Sbjct: 60 AAYTAVDQAEQEPGRAYRVNRDGAGVLAACAKAHHALLIHISTDYVFDGNSCLPYRETDR 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PL IYGKSK A EE + +++ILRT+W+YS++G NFL +MLRL E+ I V+ D Sbjct: 120 PAPLGIYGKSKRAAEELIFEIAPSFLILRTSWLYSLYGHNFLKTMLRLGAEKDVIKVIFD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT A +ARAI+ I + + G + ++ G SW DFA I Sbjct: 180 QTGTPTYAGDLARAIMTILGKVRLD---EQYGALYHYSNEGVCSWYDFAVAIM----ALK 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I T +YP + RP +S L+ S + + I W++ + ++L Sbjct: 233 KLPCKVLPIETTEYPLPSPRPFFSVLNKSAIKRDWGLVIPYWRDSLESVL 282 >gi|317487715|ref|ZP_07946311.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|316913172|gb|EFV34685.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] Length = 300 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 105/307 (34%), Positives = 160/307 (52%), Gaps = 29/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + EI+ ++D+ ++ Sbjct: 1 MRILVTGGNGQLGNELQRILREGRSEIGPIPDAYAGAEIVAADVDELDVTDADAVMAYVA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA+++G + +STDYVF G Sbjct: 61 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAVGAKLVQVSTDYVFPGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + + ++RTAW+Y G NF+ +M+RL Sbjct: 121 EPEPRVEDDPTGPVSAYGRTKLAGEERSLAACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFAE Sbjct: 181 DRDEVTVVDDQLGNPTSANDLAHEILKIA-------STEDYGVYHCTNE-GTCSWADFAE 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + + G V R +++Y P A RPAYS L +L +T + W++ + Sbjct: 233 AVMEGA----GLDCAVIRCTSEEYAAMNPASAKRPAYSSLRNKRLEDTVGNEMRPWRDAL 288 Query: 284 RNILVNI 290 L N+ Sbjct: 289 SAYLNNL 295 >gi|227534053|ref|ZP_03964102.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188325|gb|EEI68392.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 280 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 147/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ L + + +E ++D+ ++ F PDVI + AA Sbjct: 1 MKILITGANGQLGTELRHLLDHRGLEYRATDAKELDITDADAVNAYVKDFQPDVIYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE I +N +G +A AA +YISTDYVFDG S Sbjct: 61 YTAVDKAEDEGKAINQKVNVDGTKNLAVAAGENDATLVYISTDYVFDGDSDELYTVDHKP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE V Y + I+RT+WV+ +G NF+ +ML LAK ++VV DQ Sbjct: 121 APRNEYGRTKYEGELAVQKYAKKFYIIRTSWVFGEYGHNFVYTMLDLAKTHDTLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + +E GI+H++ D +W +FA I ++ Sbjct: 181 YGRPSWTKTLAEFMTFAIDQKLE------YGIYHLSEDNS-CNWYEFATEILKDT----- 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +KV + + +YP KA RP +S LD SK T + TW+E + + I Sbjct: 229 -DTKVLPVTSAEYPQKAWRPRHSILDLSKTKAT-GFELPTWQEALSEFMTEI 278 >gi|332525496|ref|ZP_08401654.1| dTDP-4-dehydrorhamnose reductase [Rubrivivax benzoatilyticus JA2] gi|332108763|gb|EGJ09987.1| dTDP-4-dehydrorhamnose reductase [Rubrivivax benzoatilyticus JA2] Length = 299 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 159/295 (53%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-IDLLKPKDFASFFLSFSPDVIINPAA 59 MK +++G GQ+ L ++ + R D +P+ + + PDVI+N AA Sbjct: 1 MKLMLLGCGGQLGWELQRALAPLGTLVALDRDTGADFSRPETLPALLDTHRPDVIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD+AE EPE+A +INAE G +A+ A + G ++ STDYVFDG E +PT Sbjct: 61 HTAVDRAESEPELARTINAEAPGLLAREAAARGAWLVHYSTDYVFDGSGTHARAEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG++KL GEE+V + ++ILRT+WVY+ G+NF +ML+LA ER ++ VV DQ Sbjct: 121 PLSVYGRTKLEGEEQVRASGCRHLILRTSWVYAARGANFAKTMLKLAAEREKLRVVADQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG- 238 G PT A +A + SL G +H A GG SW +A + + G Sbjct: 181 GAPTGADLLADVSAHALRQAMAT--PSLAGTYHCVA-GGETSWHGYARLVVEHARAAGHT 237 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T YPT A RP S LD S L + + W++GVR +L I Sbjct: 238 LRITPDAIEPVPTSDYPTPARRPLNSRLDTSALRERFGLHLPPWQDGVRRMLDEI 292 >gi|325970219|ref|YP_004246410.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] gi|324025457|gb|ADY12216.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] Length = 299 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 151/302 (50%), Gaps = 24/302 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 M L+ G GQ+ L + + V I+ V ++D+ SFF Sbjct: 1 MTILITGAKGQLGNELCRILGEGVSERGELPLFYERSRIVAVDVDELDITTSDAVDSFFA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+++ N AA T VD E + A+ +NA G +A A + G ++ISTDYVFDGL Sbjct: 61 LHKPNLVFNCAAMTNVDGCEGNEDAAYLVNAVGPKNLAVACERHGARLMHISTDYVFDGL 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E P YG+SKLAGE V + N I RTAW+Y G+NF+ ++LRLA+ Sbjct: 121 GTRPYVETDEPAPNTAYGRSKLAGERFVLASCRNSCICRTAWLYGYIGNNFVKTLLRLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PTSA+ +A L + + GIFH T +G VSW FA+ Sbjct: 181 EKGSLTVVDDQVGNPTSAVDLAWQ-------LALLAASQETGIFHCTCNGEAVSWNAFAK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I ++ G +V T Q+P A RPAYS L+ L T + WKE + + L Sbjct: 234 RIMEKA----GLAVEVKACTTAQFPRPAKRPAYSALENRHLRETIGDSMRDWKEALDSFL 289 Query: 288 VN 289 VN Sbjct: 290 VN 291 >gi|9957821|gb|AAG09503.1|AF279616_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLTALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|204929047|ref|ZP_03220190.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321591|gb|EDZ06790.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 299 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDLPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHVVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|152974750|ref|YP_001374267.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023502|gb|ABS21272.1| dTDP-4-dehydrorhamnose reductase [Bacillus cytotoxicus NVH 391-98] Length = 283 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 160/290 (55%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NGQ+ + L + + E+ +G+ +D+ K +D PD++I+ AAY Sbjct: 5 KVCITGANGQLGKELQEVFTLDKYEVHPLGKDVLDVTKMEDVMRLMQQLQPDIVIHAAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAEDE +AF +NA G IA AA +YISTDYVF G + EF T P Sbjct: 65 TKVDKAEDEQALAFLVNAIGTRNIAVAAQEYNAKLVYISTDYVFSGDQKEGYHEFHATAP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SKLAGE+ V S + Y I+RT+W+Y +G NF+ ++LRLA ER EIS+V DQ G Sbjct: 125 INIYGHSKLAGEQFVQSLHHRYFIVRTSWLYGKYGHNFVKTILRLADEREEISIVSDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +AR I ++ +T+L GI+H+ + G SW +FA+ + + Sbjct: 185 SPTYAGDLARMIEKLV-------ETNLYGIYHVC-NSGSCSWYEFAK----NALQIMRKD 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV+ I TK Y KA RP YS L + + W E + + I Sbjct: 233 VKVHPITTKDYGAKAKRPQYSILKNHMIELNGFPILRGWNEALAQCIERI 282 >gi|168481317|gb|ACA24805.1| RmlD [Shigella dysenteriae] gi|187880616|gb|ACD37122.1| RmlD [Shigella boydii] Length = 299 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GMYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPATAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|228994851|ref|ZP_04154648.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM 12442] gi|228764898|gb|EEM13655.1| DTDP-4-dehydrorhamnose reductase [Bacillus pseudomycoides DSM 12442] Length = 280 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G GQ+ + + + + + R ++D+ S PD++++ AA Sbjct: 1 MKVLVTGAGGQLGKEFIAYFTEKGDTLYSFTRKELDVTDATSLNPIMKSLKPDLVLHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE+ + A+++NA G IA A+++IG +Y STDYVFDG+ EF TN Sbjct: 61 YTKVDAAEENWKEAYAVNALGTRNIAVASEAIGAKLVYFSTDYVFDGMHARDYHEFDQTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKLAGEE V ++ + Y I+RT+W+Y G NF+ +M LA+ ++E+ VVCDQ Sbjct: 121 PLNVYGASKLAGEEAVRNFHSRYFIMRTSWLYGGEGPNFVRTMQTLAQTKKELRVVCDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + ++ T+ G +H++ + G SW +FA IF E Sbjct: 181 GCPTYTKDLVCKTGEMIQ-------TNQYGTYHVS-NRGECSWFEFATRIFQEMRV---- 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T++Y KA RP YS L L + W+E +R ++ Sbjct: 229 NVKVIPVKTEEYRAKAERPRYSVLQHLCLELNGFTSMRQWEEALREYIIE 278 >gi|189092402|gb|ACD75802.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Escherichia coli] gi|288816210|gb|ADC54933.1| RmlD [Escherichia coli] gi|315285653|gb|EFU45095.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 110-3] gi|323956210|gb|EGB51961.1| RmlD substrate binding domain-containing protein [Escherichia coli H263] Length = 299 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTNYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPDFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDAPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|66044180|ref|YP_234021.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] gi|63254887|gb|AAY35983.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] Length = 301 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +AK A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAKEAAALGAWLIHYSTDYVFDGSGEQQWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG SKL GE+ + + +ILRT+WVY+ G NF +MLRLA ER ++VV Sbjct: 121 AATGPLSVYGGSKLMGEQAIQASGAKALILRTSWVYAARGHNFAKTMLRLATERDSLNVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQ+G PT A IA QI + + + + + GI+H+ A G SW FA+++ +A Sbjct: 181 ADQYGAPTGAELIADVTAQILYRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAA 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YP A RP S L SKL +++ +W++G + +L I Sbjct: 240 RNGVALKVAPDQIGAIPTEAYPVPAPRPRNSRLALSKLETAFQLKMPSWQQGAQRMLDEI 299 >gi|331668737|ref|ZP_08369585.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271] gi|331063931|gb|EGI35842.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA271] Length = 299 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWAIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|291561388|emb|CBL40187.1| dTDP-4-dehydrorhamnose reductase [butyrate-producing bacterium SS3/4] Length = 282 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 146/292 (50%), Gaps = 14/292 (4%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ + M + + I V ++D+ + + + +I+ AA Sbjct: 1 MRVLVTGVKGQLGHDVVNEMEKRGLTPIGVDLAEMDITDKEACDRVITEANVEAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED E+ +NA G IA+ +GI +YISTDYVFDG P + + Sbjct: 61 YTAVDAAEDNIEVCRKVNAGGTRNIAEVCKKLGIKMMYISTDYVFDGQGTRPWEPDDERH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG+SK GE V + +R AWV+ + G NF+ +MLR+ KER SVV DQ Sbjct: 121 PLNVYGQSKYEGELAVEELVEKFFTVRIAWVFGVNGKNFIKTMLRIGKERGAASVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G SW +FA IF + G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GLCSWYEFACEIFRVA----GM 228 Query: 240 YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +YP KA RP S + KL R+ WK+ V L I Sbjct: 229 DVKVTPVHSDEYPAAKAKRPMNSRMSKEKLTENGFERLPEWKDAVARYLKEI 280 >gi|254482659|ref|ZP_05095897.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2148] gi|214037018|gb|EEB77687.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2148] Length = 293 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ + L + VE I R +D+ +F P +IIN AAYT Sbjct: 4 KVLITGAAGQLGRELLRSVPEGVECIAATREILDIADAAQVRAFVRRERPGLIINAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E E+A +IN GA +A A G I++STD+VFDG S TP +PT+PL Sbjct: 64 AVDKAESEQELAAAINVNGAANLATACAENGSRLIHVSTDFVFDGTSSTPYLPDAPTSPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG+SKLAGE+ V + + +I+RTAWVYS FG NF+ +MLRL ER E+SVV DQ GT Sbjct: 124 GEYGRSKLAGEQAVVAGLPSALIMRTAWVYSAFGGNFVKTMLRLMAEREELSVVADQVGT 183 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT A +A A+ + + L+G++H T D G SW DFA I E+ E G Sbjct: 184 PTWARGLADALW------LAADQSDLQGLYHWT-DAGVCSWYDFAVAIAEEALEIGLLQR 236 Query: 241 -SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I YPT A RPA+S LD + W+ +R++L + Sbjct: 237 MPRIHPIPGSAYPTPAARPAFSVLDKNSTWAVLKTEGLHWRSQLRSMLKEL 287 >gi|294341172|emb|CAZ89573.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Thiomonas sp. 3As] Length = 302 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 9/297 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L + ++ + R DL + P++I+N AAYT Sbjct: 5 RILLLGADGQVGWELRRALLPLGDVRPLNRTQADLGDLDALRTVLQREQPELIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTN 119 AVDKAE +PE+A INA G +A A ++ STDYVFDG P E N Sbjct: 65 AVDKAETDPELAQRINAAAPGVLAAWAAEHHAMLVHYSTDYVFDGAKPAPGSYTEADTPN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG+SKLAGE+ + + ++ILRT+WVY+ G NF +ML+LA ER + V+ DQF Sbjct: 125 PQSAYGRSKLAGEQAITASGCRHLILRTSWVYAARGGNFAKTMLKLATERDSLRVIADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERG 237 G PTSA +A + H L +S + G++H+TA G SW +A+++ +A RG Sbjct: 185 GAPTSAELLADVTALMLHRLRTDSALAQQASGLYHLTAQ-GSTSWHGYAQFVIARAAARG 243 Query: 238 GP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +V I T YP A RPA S LDCSKL T ++ + W+ V+ ++ + Sbjct: 244 LPLRCAPEQVQAITTADYPLPAPRPANSRLDCSKLQTTFDLFLPPWQTQVQRLIDEL 300 >gi|253999153|ref|YP_003051216.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. SIP3-4] gi|253985832|gb|ACT50689.1| dTDP-4-dehydrorhamnose reductase [Methylovorus sp. SIP3-4] Length = 301 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 117/295 (39%), Positives = 166/295 (56%), Gaps = 14/295 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ +L M + + R ++L + PDVI+NPAAYT Sbjct: 5 RILLTGVHGQVGHALLPMLATWGTVTALDRAALNLSDAAAIRKTVRTLRPDVIVNPAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++A++INAE +A+ A +G ++ STDYVFDG + P E TNPL Sbjct: 65 AVDKAETEPDLAYAINAEAPRILAEEAAELGARMVHYSTDYVFDGRASKPYRETDMTNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+ V ++ILRT+WVY +G NFL ++LRLA+ER + +V DQFG Sbjct: 125 GVYGASKLAGEKAVQQAGQQHLILRTSWVYGAYGKNFLHTILRLARERDSLGIVADQFGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW----ESAERG 237 PTS+ IA A + L+++ L GI+H+T + G SW FA I AER Sbjct: 185 PTSSHDIASATL----TLLKSWQPELSGIYHLT-NSGYTSWYGFAVAILQAYEGLQAERD 239 Query: 238 GPYSK-----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + V I T +YPT A RPA S LD L +R+ W++ + ++ Sbjct: 240 LPPLRVSSEAVRAITTAEYPTPAARPANSRLDGDLLEQDWGLRLQDWRQALVQVM 294 >gi|187730759|ref|YP_001879839.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii CDC 3083-94] gi|187427751|gb|ACD07025.1| dTDP-4-dehydrorhamnose reductase [Shigella boydii CDC 3083-94] Length = 299 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S P++I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPEIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ + + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMFNEL 293 >gi|331658120|ref|ZP_08359082.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA206] gi|331056368|gb|EGI28377.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli TA206] Length = 299 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIR--VAANKPEVAGLYHLVA-GGTTTWHDYAALVFEEARRA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|315225456|ref|ZP_07867269.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea F0287] gi|314944554|gb|EFS96590.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea F0287] Length = 280 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 150/283 (53%), Gaps = 9/283 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G +GQ+ + + + +D+ + +F + VI+N AAY Sbjct: 1 MNVLVTGGSGQLGSEIQANPHKKSCYYFTDINSLDICDVQAIRAFVQLNNIGVIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A IN +A +P I+ISTDYVF G TP E PT P Sbjct: 61 TNVDKAEDDSALATLINHTAVENLATVCKEHNLPLIHISTDYVFGGSKNTPYTETDPTTP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL+ ER E+ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQQAGIEHLIIRTAWLYSLRFGHNFVKTIQRLSAERTELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A I+Q NL ++H + + G SW DFA I +S G Sbjct: 181 GTPTNASDLADFIVQAVENLWYKGKRE---VYHFSNE-GVCSWYDFAVTIVAQS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 KV + ++P+K RPAYS LD +KL N I W+ Sbjct: 233 NCKVLPCRSDEFPSKVTRPAYSVLDKTKLKKDFNYPIPHWRHS 275 >gi|160863320|gb|ABX51886.1| dTDP-6-deoxy-L-mannose dehydrogenase [Cronobacter sakazakii] Length = 300 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 111/297 (37%), Positives = 154/297 (51%), Gaps = 11/297 (3%) Query: 1 MK--CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVI 54 MK L+ G NGQ+ L +I + D P+ A PDVI Sbjct: 1 MKVNILLFGKNGQVGWELQRALAPLGNLISLDFNSEDYCGDFSNPEGVAETVRRIKPDVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AA+TAVDKAE E E A +NA AIA+ A I I+ STDYVF G TP E Sbjct: 61 VNAAAHTAVDKAESEREFAQLLNATSVEAIAREAAKINAWLIHYSTDYVFPGTGETPWCE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T PLN+YG++KLAGE+ V + N++I RT+WVY+ G+NF +MLRLAKER +SV Sbjct: 121 SDATAPLNVYGETKLAGEQAVQRFCPNHLIFRTSWVYAGKGNNFAKTMLRLAKERESLSV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + DQ+G PT A +A + D + G++H+ A G +W DFA +F ++ Sbjct: 181 INDQYGAPTGAELLADCTAHAIRVALTKPDVA--GLYHLVA-SGVTTWYDFAALVFDQAR 237 Query: 235 ERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + + + T YPT A RP S L+ K + + W GV+ +L Sbjct: 238 KAGITLKLTDLQPVPTSAYPTPACRPQNSRLNTMKFQQQFGLVLPQWDMGVKRMLEE 294 >gi|40388618|gb|AAR85523.1| RmlD [Thermoanaerobacterium thermosaccharolyticum] Length = 294 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 155/300 (51%), Gaps = 25/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L S+ + + +I V D+D+ D + Sbjct: 1 MKLLITGARGQLGIQLRSVLERGKSELGKIDDIYSNADIKYVSHNDLDITNLNDVLDYVE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P+ IIN AAYT VD+ E + + AF +NA G +A A+ + ++ISTDYVF G Sbjct: 61 QYKPNAIINCAAYTNVDRCESDIDNAFKVNAIGPRNLAIASHIVDAKLLHISTDYVFSGE 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ NP+++YGKSKL GE+ V + + Y I+RTAW+Y +G NF+ +++ AK Sbjct: 121 GNEPYKEYDMPNPVSVYGKSKLLGEQYVRDFCDKYFIVRTAWLYGKYGKNFVYTIINAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER + VV DQ G PT+A +A I+++ T GI+H T + G SW DFA Sbjct: 181 ERGYLEVVNDQRGNPTNAEDLAYHILKLIL-------TDEYGIYHCTGN-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + +V I + + +A RP+YS LD L T ++ W + +++ + Sbjct: 233 KIVEYTD----IKCRVMSITSDKIKREAKRPSYSSLDNMMLRCTIGDKMRNWDDALKSFI 288 >gi|114321465|ref|YP_743148.1| dTDP-4-dehydrorhamnose reductase [Alkalilimnicola ehrlichii MLHE-1] gi|114227859|gb|ABI57658.1| dTDP-4-dehydrorhamnose reductase [Alkalilimnicola ehrlichii MLHE-1] Length = 306 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 114/299 (38%), Positives = 155/299 (51%), Gaps = 12/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 M+ L+ G NGQ+ L E+I +GR + DL A S PD+I+ Sbjct: 1 MRTLLFGPNGQVGWELRRSLAPLGELIPLGRHEWQGLRGDLTDKDAIAHAIRSLRPDLIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVD+AE EPE A INA G +A+ A I+ STDYVFDG P E Sbjct: 61 NAAAYTAVDQAESEPEQARLINATAPGVMAELAREQQALFIHYSTDYVFDGSGDRPWHED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT PLN+YG++K GEE V + +++I RTAWVY+ G NF+ +M+RLA +R + V+ Sbjct: 121 DPTAPLNVYGQTKREGEEAVRAADGHHLIFRTAWVYAARGHNFIRTMIRLACQRDTLQVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA A D LRG +H+TA G +W +A ++ ++ Sbjct: 181 NDQHGAPTGAELIADVTAHAARTASTRPD--LRGTYHLTA-AGETTWHGYARFVIEQARA 237 Query: 236 RGGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + + T +PT A RP S LD KL T ++ W+ GV L + Sbjct: 238 GGAPVRVAPEAIEAVATDAFPTVARRPHNSRLDGHKLETTFGLKRPDWRSGVARALQEM 296 >gi|86144026|ref|ZP_01062364.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella blandensis MED217] gi|85829486|gb|EAQ47950.1| putative dTDP-4-dehydrorhamnose reductase [Leeuwenhoekiella blandensis MED217] Length = 289 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 165/291 (56%), Gaps = 12/291 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G+NGQ+ Q L + D+ V R + DL + ++ +PD +IN AA Sbjct: 4 RILVTGSNGQLGQELQVLASTYPDMLFDFVTREEFDLEDEEQLLTYLNKTTPDYVINCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE A INA +A + ++ISTDYVFDG S P E + TN Sbjct: 64 YTAVDKAESEPEKATQINAHAVRLLANWSAEHHAKLVHISTDYVFDGSSSIPYTETAVTN 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +KL GE+ + +I+RTAWVYS+FG+NF+ +MLRL +ER +++V DQ Sbjct: 124 PQSVYGSTKLEGEQAALASNPEVLIIRTAWVYSVFGNNFVKTMLRLMQERDSLNIVKDQI 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A+AI++I S GI+H + + G +SW +FA+ I E G Sbjct: 184 GSPTYAADLAQAILKILA-----SAHWESGIYHYS-NAGRISWYEFAQAI----KEVAGL 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T YPT A RPAYS L+ K+ + + + +KE + L ++ Sbjct: 234 ACDLDGIPTSAYPTPAKRPAYSLLNTQKIQQVYKVAVPDYKESLTMCLQHL 284 >gi|323340990|ref|ZP_08081239.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus ruminis ATCC 25644] gi|323091652|gb|EFZ34275.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus ruminis ATCC 25644] Length = 304 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 103/313 (32%), Positives = 153/313 (48%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G +GQ+ + + + E I +D+ K Sbjct: 1 MKIFVTGVSGQLGHDVMNELNKRGYEGIGSDIAPEYAGASDGTFVTSAPYVSMDITDKKA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDV+++ AA+TAVD AED+ E+ +NA+G IA + +YIS Sbjct: 61 VEKTITDLNPDVVVHCAAWTAVDMAEDDDKVELVRQVNAKGTENIALVCKKLDCKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDCKDYKPLNVYGQTKLEGELAVSQNLDKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K + VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHDTLKVVSDQIGTPTYTYDLARLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DFA IF ++ G +KV + T++Y +KA RP S LD SKL + Sbjct: 234 YISWYDFACEIFKQA----GYKTKVIPVTTEEYGLSKAARPFNSRLDKSKLKENGFELLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALSRYLKEI 302 >gi|47568424|ref|ZP_00239125.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241] gi|47554972|gb|EAL13322.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9241] Length = 284 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|312901447|ref|ZP_07760722.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0470] gi|312903795|ref|ZP_07762968.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0635] gi|310632869|gb|EFQ16152.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0635] gi|311291436|gb|EFQ69992.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0470] gi|315578164|gb|EFU90355.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0630] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E I ++D+ + P+VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYISTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|284047954|ref|YP_003398293.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus fermentans DSM 20731] gi|283952175|gb|ADB46978.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus fermentans DSM 20731] Length = 301 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 103/311 (33%), Positives = 153/311 (49%), Gaps = 32/311 (10%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD----------------IDLLKPKDFA 43 MK LV G NGQ+ + + + E + G +D+ Sbjct: 1 MKTLVTGVNGQLGYDVMLELQKRGYEAVGCGSSPEYRGMADAVAKLPYVSLDITDDAAVD 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 PD + + AA+TAVD AE+ + F++N +G +A+A ++ +YISTD Sbjct: 61 RVLQEIKPDCVCHCAAWTAVDAAEEPENKDKVFAVNVDGTRNLARACQALDAKFMYISTD 120 Query: 102 YVFDGLSRTPID-EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 YVF+G P + PLN+YGKSKL GE V Y I+R AWV+ G+NF+ Sbjct: 121 YVFNGQGTEPWKADSQEFAPLNVYGKSKLYGELAVKELLEKYFIVRIAWVFGRNGNNFVK 180 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 +ML++ K + VV DQ GTPT +AR ++ + +T G +H T +GG + Sbjct: 181 TMLKVGKNHDTLRVVNDQIGTPTYTADLARLLVDML-------ETEKYGTYHATNEGGYI 233 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTW 279 SW DFA IF ++ G +KV + T++Y +KA RP S LD SKL + W Sbjct: 234 SWYDFATEIFRQA----GYSTKVIPVTTEEYGLSKARRPFNSRLDKSKLKEQGFQPLPDW 289 Query: 280 KEGVRNILVNI 290 ++GVR L + Sbjct: 290 RDGVRRYLEEL 300 >gi|332532394|ref|ZP_08408274.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas haloplanktis ANT/505] gi|332038261|gb|EGI74707.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas haloplanktis ANT/505] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 110/298 (36%), Positives = 164/298 (55%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L C +VE+I G ++D+ + ++ SPD++IN AAY Sbjct: 1 MKILVTGKNGQLGSELQKTCPSNVELICFGSKELDISNAEQVNELLITHSPDIVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A+++N GA +A I I+ISTD+VFDG S P TNP Sbjct: 61 TAVDKAETDTDTAYAVNKLGAANLASTCKHINARLIHISTDFVFDGTSTMPYTASDATNP 120 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG SKLAGE+ + + I+RTAWVYS+FG+NF+ +MLRL E+ ++ +V DQ Sbjct: 121 LGVYGASKLAGEQAINEILGSQATIVRTAWVYSVFGNNFVKTMLRLMAEKEQLGIVGDQV 180 Query: 180 GTPTSALQIARAIIQIA-----HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 GTPT A +A + + ++ +T+ I + T D G SW DFA I + Sbjct: 181 GTPTWAAGLANMLWALVAKASSEQVLNTENTAT--ILNWT-DAGVASWYDFAVAIQELAI 237 Query: 235 ERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E+G + I YPT A RPA+S L+ ++ ++ W+ ++ +L + Sbjct: 238 EQGLLTKSIPISAIPAASYPTPAKRPAFSVLNKAQAEEISGVKTVHWRTQLKEMLTEL 295 >gi|312960468|ref|ZP_07774977.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311285353|gb|EFQ63925.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 297 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 161/292 (55%), Gaps = 4/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +V G GQ+ + L +I G ++D+ P ++IN AAY Sbjct: 1 MRVIVTGAQGQVGRELLLRAPSGFNVIGYGSGELDISDSVQVEEVLARIKPQLLINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A+++N +G +A+AA + GI ++ISTDYVFDG P T P Sbjct: 61 TAVDKAESDIERAYAVNRDGVAHLARAAQAQGIAVLHISTDYVFDGNHTLPYTPADVTAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SKLAGE+++ + + +VILRT+WV+ G+NF+ +MLRL +ER E++VV DQ G Sbjct: 121 SGVYGSSKLAGEQQLQQHCSRHVILRTSWVFGAHGNNFVKTMLRLGRERDELAVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PTSA IA + +A + G++H + +W DFA+ IF ++ Sbjct: 181 CPTSAGSIADTLWALATIFRRDGMLKW-GVYHYSG-APACTWYDFADEIFNQARSEALLE 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + ++PT+A RP +S LDC L + + +WK ++ +L + Sbjct: 239 KKPRLKAITSAEFPTQAKRPGWSVLDCQTLEQDYGVSTRSWKVELQQVLQQL 290 >gi|170019634|ref|YP_001724588.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ATCC 8739] gi|169754562|gb|ACA77261.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ATCC 8739] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ + PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVHSTDYCGDFSNPEGVSETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G P E + Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAN 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|30249026|ref|NP_841096.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas europaea ATCC 19718] gi|30138643|emb|CAD84934.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas europaea ATCC 19718] Length = 304 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 112/297 (37%), Positives = 162/297 (54%), Gaps = 11/297 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINP 57 K L+ G NGQ+ L E+I + D+ DL + PD+I+N Sbjct: 9 KILLFGKNGQVGWELQRSLAPLGELIAPDKQDLRYCGDLADLAGITHTLQTIRPDIIVNA 68 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE EPE+AF INAE +A+ A+ IG I+ STDYVF+G P E Sbjct: 69 AAYTAVDQAESEPELAFRINAEAPELLAQQAEQIGAWLIHYSTDYVFNGNGNCPWQETDL 128 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T+P+NIYG SKL GEE++ Y+ILRT+WVY+ G NF+ ++LRLA+E+ +++++ D Sbjct: 129 TSPINIYGLSKLRGEEQIRKSNCKYMILRTSWVYAARGKNFIKTILRLAREKEQLTIIDD 188 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT A +A Q L+E D S G++H+ A VSW +A ++ + E Sbjct: 189 QIGAPTGAELLADITAQAIPQLLEYPDKS--GVYHVAASE-EVSWYSYARFLLDFAREHD 245 Query: 238 GP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P V + ++ + T A RP S L+ K NT + + W+ GV +L I Sbjct: 246 IPIKVHPDAVIPVHSEAFVTAARRPLNSRLNTEKFCNTFQLCLPHWQTGVTRVLEEI 302 >gi|323948400|gb|EGB44384.1| RmlD substrate binding domain-containing protein [Escherichia coli H120] gi|324119069|gb|EGC12958.1| RmlD substrate binding domain-containing protein [Escherichia coli E1167] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 SAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|333003380|gb|EGK22924.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-272] gi|333017210|gb|EGK36530.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-227] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIR--VAANKPEVAGLYHLVA-GGTTTWHDYAALVFEEARRV 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|82777432|ref|YP_403781.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae Sd197] gi|81241580|gb|ABB62290.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella dysenteriae Sd197] Length = 299 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRL KER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLGKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-TGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|24113425|ref|NP_707935.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 301] gi|30063491|ref|NP_837662.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 2457T] gi|110806009|ref|YP_689529.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 5 str. 8401] gi|27735226|sp|P37778|RMLD_SHIFL RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|294897|gb|AAA53680.1| dTDP-6-deoxy-D-glucose-3,5 epimerase [Shigella flexneri] gi|24052448|gb|AAN43642.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str. 301] gi|30041744|gb|AAP17471.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 2a str. 2457T] gi|110615557|gb|ABF04224.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella flexneri 5 str. 8401] gi|281601493|gb|ADA74477.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2002017] gi|313649923|gb|EFS14343.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2a str. 2457T] gi|332756673|gb|EGJ87022.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-671] gi|332756856|gb|EGJ87201.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2747-71] gi|332766385|gb|EGJ96594.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri 2930-71] gi|333002465|gb|EGK22027.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-218] gi|333002552|gb|EGK22113.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri VA-6] gi|333017170|gb|EGK36491.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri K-304] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIR--VAANKPEVAGLYHLVA-GGTTTWHDYAALVFEEARRA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|126662750|ref|ZP_01733749.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BAL38] gi|126626129|gb|EAZ96818.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BAL38] Length = 315 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 119/320 (37%), Positives = 167/320 (52%), Gaps = 35/320 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC------------VQDVEIIRVGRPDIDLLKPKDFASFFLS 48 M LV G NGQ+ Q++ S+ Q ++ + ++D+ ++ + F + Sbjct: 1 MVVLVTGANGQLGQAIQSISGKYPDSSQYSEQAQQIDFVFCSSSELDITNLENCQTVFST 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-- 106 + P IN AAYTAVDKAE EP AF+INA GA +A + I+ISTD+VFD Sbjct: 61 YQPHFCINAAAYTAVDKAESEPANAFNINANGAENLAITSKKHNTILIHISTDFVFDAYF 120 Query: 107 -LSRTPID--------------EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 D E P IYG +KL GE+ + + + I+RT+WVY Sbjct: 121 LDGIAYYDREFRLPLKSNLGLLETDVPFPSGIYGLTKLQGEQAIQATWEKHFIIRTSWVY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN-LIENSDTSLRGI 210 S F +NFL +MLRLAKER ISVV DQ GTPT+A+ +A +I+I + E S GI Sbjct: 181 SQFRNNFLKTMLRLAKERDTISVVNDQIGTPTNAVDLAEVLIKIIESCHAELVSASNYGI 240 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 ++ + + G SW DFA+ IF + + I T YPT A RPA+S LD SK+ N Sbjct: 241 YNFSNE-GVCSWYDFAKEIFN----QNKISITLNPIPTTAYPTPAKRPAFSVLDKSKIKN 295 Query: 271 THNIRISTWKEGVRNILVNI 290 I I TW+E + + L + Sbjct: 296 IFGIEIKTWEESLSSCLNQM 315 >gi|168481293|gb|ACA24783.1| RmlD [Shigella dysenteriae] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWAIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLSAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|312962411|ref|ZP_07776902.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311283338|gb|EFQ61928.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 298 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 106/298 (35%), Positives = 161/298 (54%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L +++ + DL + A+ F+PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRSLAPLGQVLALDSKSQDYCGDLNDLQGLAATVQRFAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EP A +NAE +A + ++ STDYVF G TP E Sbjct: 61 AAAYTAVDKAESEPAQALRVNAEAPAVLAAEVRKLNALLVHYSTDYVFAGDGDTPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG +KL GE+ + + ++I RT+WVY+ G+NF +ML LA+ER ++V+ Sbjct: 121 PVGPLSVYGTTKLQGEQAIQASGCAHLIFRTSWVYAARGNNFAKTMLGLARERDSLNVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFGTPT A +A + ++ + L G++H+ A G +W +A ++ ++ Sbjct: 181 DQFGTPTGADLLADITAHAIRS--QHLNPQLSGVYHLAA-AGETTWHRYARFVLEQAQAA 237 Query: 237 G----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + V I T YPT A RP S L+ KL N ++R+ W++GV +L+ I Sbjct: 238 GVQLSVTPANVGAITTAAYPTPAKRPGNSRLNTQKLQNAFSLRLPEWQDGVARMLIEI 295 >gi|307340769|gb|ADN43832.1| RmlD [Escherichia coli] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GILLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|304310332|ref|YP_003809930.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1] gi|301796065|emb|CBL44269.1| dTDP-4-keto-L-rhamnose reductase [gamma proteobacterium HdN1] Length = 301 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/297 (37%), Positives = 159/297 (53%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G NGQ+ L E+I +G+ + DL + + +PDVI+N Sbjct: 1 MKLLIFGKNGQVGWELQRSLAPLGEVIALGQNEANLCGDLSNLEGLRATLQRVAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE EP++A+ INAE +A+ A +G ++ STDYV++G E Sbjct: 61 AAAHTAVDRAESEPDLAYRINAEAPSVMAEEAQRLGALLVHYSTDYVYEGSGERFWQESD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN+YGKSKLAG++ + + ++I RT+WVY+ G+NF +ML LA+ R +SVV Sbjct: 121 APAPLNLYGKSKLAGDQAIMASGCRHLIFRTSWVYAARGNNFAKTMLGLARTRNALSVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A IA Q + + D +G++H+ A G SW D+A +F + E Sbjct: 181 DQVGAPTGAELIADVTAQAIYQAL--LDPQKQGLYHLVA-SGSTSWFDYAREVFSVAREL 237 Query: 237 G----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G V I + +YP A RP S L KL NT + + WK GV +L Sbjct: 238 GETLQLSDDAVTPIASSEYPKPAQRPLNSRLCTQKLTNTFQLTLPDWKVGVARMLRE 294 >gi|150017437|ref|YP_001309691.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] gi|149903902|gb|ABR34735.1| dTDP-4-dehydrorhamnose reductase [Clostridium beijerinckii NCIMB 8052] Length = 293 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ + ++ + E+I +D+ Sbjct: 1 MKILITGAKGQLGREITEIIKIGRADIGEISESIKVSEVIGFDVDRLDITNLVKVKEVLS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+V+IN AA T VD+ E + + AF +N+ G +A A DSIG + +STDYVF+ Sbjct: 61 YLKPEVVINCAAATNVDRCEIDEDFAFRVNSIGPRNLAIACDSIGAKLVQVSTDYVFNEN 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 + P+ E+ +P ++YGK+K GE+ V + + I+RTAW+Y GSNF+ ++++L+K Sbjct: 121 THKPLKEYDLASPSSVYGKTKFLGEQYVQLLCSKHFIVRTAWLYGYVGSNFVYTIMKLSK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ I+VV DQ G PT A +A I+++ +T GI+H T + G +W +FA+ Sbjct: 181 EKNYINVVNDQMGNPTYANDLAYHILKLI-------ETEDYGIYHCTNN-GECTWYEFAK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I S G +V +++Y T+A RP YS LD + L NT + WK+ + + Sbjct: 233 RIVKLS----GEECEVRPCTSEEYKTQAKRPKYSSLDNAMLRNTVGDEMRDWKDAIEAFI 288 Query: 288 VNI 290 + Sbjct: 289 SKL 291 >gi|313157657|gb|EFR57068.1| dTDP-4-dehydrorhamnose reductase [Alistipes sp. HGB5] Length = 287 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 156/290 (53%), Gaps = 8/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G NGQ+ +L + CV I ++D+ DVI+N AAY Sbjct: 3 NILITGANGQLGSALRRLGCVSPHNYICTDVAELDITDAAAVLRTVEERRIDVIVNCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V++AE++ A +N + AG +A AA + G ++STDYVFDG + TP E + +P Sbjct: 63 TDVERAEEDEPRADLLNHKAAGNLAAAAKATGATLFHVSTDYVFDGTAHTPYREDTAPSP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++KLAGE V + Y+I RTAW+YS +G NFL +MLRL ER + VV DQ G Sbjct: 123 LGAYGRTKLAGERAVMASGCRYLIFRTAWLYSEYGHNFLKTMLRLTSERDTLQVVFDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A AI I + G++H T D G SW DFA I +A G Sbjct: 183 TPTYAGDLALAIFSIIES---ERYAGNEGVYHFT-DEGVCSWYDFATEI---AAAAGHDS 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ T ++PTKA RPAYS LD +K+ T + I W+E + L + Sbjct: 236 CRIIPCHTSEFPTKAQRPAYSVLDKTKIKTTFQMDIPHWREAMIYCLKQL 285 >gi|299067779|emb|CBJ38989.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CMR15] Length = 305 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 KLLVTGSNGQVGFELRRSLAPLGEVIALDRSACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKPAAYVETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKARGVE 248 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S +D KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMDTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|254246149|ref|ZP_04939470.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia PC184] gi|124870925|gb|EAY62641.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia PC184] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 145/291 (49%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL S P +I+NPAAYTA Sbjct: 12 ILVTGVNGQVGFELLRSLQGLGRVVACDRSVLDLSDLDRVRSVVRELKPSIIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + + A +NAE A A+ A +G ++ STDYVFDG E TNP N Sbjct: 72 VDKAETDVDAARRLNAEVPRAFAEEAARLGAALVHYSTDYVFDGTKEGAYVETDATNPQN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE+ +A+ ++ILRT+WVY G NFLL+ML+L ER E+ VV DQ G P Sbjct: 132 VYGLTKLEGEQAIAATGCAHLILRTSWVYGRRGKNFLLTMLKLGSERPELRVVADQVGAP 191 Query: 183 TSALQIARAIIQIA----HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA A I + G++H T+ G SW FAE IF ++ G Sbjct: 192 TWSKTIATATAHIVAQALAADDADWWAQRSGVYHFTS-AGATSWHGFAEAIFAQA--MGE 248 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I YP A RP+ S L KL +R+ W + + L Sbjct: 249 RAPRVLPIPASDYPVPAKRPSNSQLSHDKLTEAFGLRLPDWADALTLCLSE 299 >gi|323345519|ref|ZP_08085742.1| dTDP-4-dehydrorhamnose reductase [Prevotella oralis ATCC 33269] gi|323093633|gb|EFZ36211.1| dTDP-4-dehydrorhamnose reductase [Prevotella oralis ATCC 33269] Length = 284 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 157/292 (53%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + + +++ ++D+ +D + + I+N A Sbjct: 1 MNILITGCNGQLGNEIQLLEKGNIQCQWFNTDVSELDITNAEDIEHYIQQHRINGIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE ++ ++NAE +A A + G I ISTDYVFDG TP E Sbjct: 61 AYTAVDRAESNYQLCRALNAEAPAYLAAAIEKRGGWLIQISTDYVFDGTQHTPYVETDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YGK+KL GE + +I+RTAW+YS FG+NF+ +M++L KE+ E+ V+ DQ Sbjct: 121 CPNSVYGKTKLVGETAIRKICKKTMIIRTAWLYSTFGNNFVKTMIKLGKEKTEMGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ I+ + I + G +H + + G +SW DFA+ + +G Sbjct: 181 IGTPTYAADLAKVIMTAINQGI------VPGTYHFSNE-GAISWYDFAKAVHRI---KGI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +YPT A RP YS LD +KL T+ I I W+E + + + Sbjct: 231 TTCHVKPLHTAEYPTPAKRPHYSVLDKTKLKQTYGIEIPYWEESLARCIAKM 282 >gi|309787872|ref|ZP_07682482.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae 1617] gi|50982493|gb|AAT91847.1| dTDP-4-dyhydrorhamnose reductase [Shigella dysenteriae] gi|308924271|gb|EFP69768.1| dTDP-4-dehydrorhamnose reductase [Shigella dysenteriae 1617] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRL KER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLGKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAVNKPEVA--GLYHLVA-TGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|315149173|gb|EFT93189.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0012] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G IA+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHIAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|182415801|ref|YP_001820867.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] gi|177843015|gb|ACB77267.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] Length = 292 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 108/287 (37%), Positives = 152/287 (52%), Gaps = 2/287 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G GQ+ L +++ V PD+D P +P+++IN AAYT Sbjct: 5 KILLFGKVGQVGWELRRTLAPMSQLVAVDYPDVDFTAPDSIRRAIAEAAPNIVINAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDK E E +A INA+ G +A+ A G ++ STDYVFDG +P E NPL Sbjct: 65 AVDKCESEFALAKQINADAPGVMAEEAQRRGALLVHYSTDYVFDGTKTSPYVEADAPNPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG+SKLAG+E + N++I R WVY G+NF+L+M RLA+ER ++ VV DQFG Sbjct: 125 SAYGRSKLAGDEAIRRTGCNHLIFRLCWVYGARGANFMLTMQRLAREREKLRVVADQFGC 184 Query: 182 PTSALQIARAIIQIAHNLIENSDT-SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + IA ++ +D +L G +H+ A G SW FA I Sbjct: 185 PTWSRMIAETTAHALRSVRSAADARALSGAYHLAA-SGHTSWHGFASAIIDLMPLDARKC 243 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I + +YPT RPAYS L C+KL +R+ W E +R ++ Sbjct: 244 RAVEAITSAEYPTPTKRPAYSVLSCAKLEQAFGLRLPDWHESLRQVV 290 >gi|50882469|gb|AAT85648.1| RmlD [Escherichia coli] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 VAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YGK+KLAGE + + ++I RT+WVY+ G+NF +MLR AKER E++V+ Sbjct: 121 VTAPLNVYGKTKLAGERALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRQAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A ++ + + G++H+ A+ G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVAN-GTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIDLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|331004825|ref|ZP_08328243.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989] gi|330421356|gb|EGG95604.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC1989] Length = 304 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 164/292 (56%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSF----SPDVIIN 56 + L++G +GQ+ + Q ++ + R ++DL +P +++N Sbjct: 7 RILLLGASGQVGSECKKLFQQVGYTVLCITRKELDLSSISSVDEIVERLLCFQTPSLVVN 66 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EP +A +N G +A+ IP I+ISTDYVFDG + T E Sbjct: 67 AAAYTAVDKAESEPSLADKVNHTSVGFLAQYCAKGAIPLIHISTDYVFDGTATTAYTESD 126 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PL +YG++K GE+ V S ++ILRT+WV+ I G+NF+ +MLRL+ +R ++++V Sbjct: 127 DVSPLGVYGETKWLGEQAVKSVLAQHIILRTSWVFGISGNNFVKTMLRLSADREQLTIVS 186 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A IARAI+ I + + G++H + G VSW +F++ I E+ R Sbjct: 187 DQYGCPTYAGDIARAILCIVKRY-ASGQSLNWGVYHCVGE-GKVSWYEFSQAILNEAYAR 244 Query: 237 GGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G +K + I + YPT A RPAYS L KLA N + +W++G+ Sbjct: 245 GFMPNKPQIIPIPSSAYPTPAARPAYSVLSTDKLAREFNYSVPSWRQGLSAF 296 >gi|226290772|gb|ACO40471.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dakar] gi|298353034|gb|ADI77013.1| RmlD [Salmonella enterica] Length = 299 Score = 323 bits (828), Expect = 2e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 163/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A+RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPANRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|307277279|ref|ZP_07558383.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2134] gi|306506209|gb|EFM75375.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2134] Length = 299 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P+VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|56684517|gb|AAW22482.1| RmlD [Lactobacillus rhamnosus] Length = 280 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE I +N +G +AKAA+ + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSKEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDSS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 228 KDVTVKPVSSKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|260437568|ref|ZP_05791384.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio crossotus DSM 2876] gi|292810200|gb|EFF69405.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio crossotus DSM 2876] Length = 303 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 154/313 (49%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPD------------------IDLLKPKD 41 M+ V G GQ+ + + + + I + +D+ + Sbjct: 1 MRIFVTGVAGQLGHDVMNELNKRGHVGIGSDIAEQYQGVGDGSYVTKAEYISLDITDKES 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 PD +I+ AA+TAVD AEDE + +INA+G IA+A +YIS Sbjct: 61 VDKVIGEVKPDAVIHCAAWTAVDLAEDEDKKDKVKAINADGTENIARACKKYDCKMMYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG +KL GE+ V+S + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGETPWEPDCKDYKPLNVYGATKLMGEQAVSSILDKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K ++ VV DQ GTPT L +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHPQVRVVSDQIGTPTYTLDLARLLVDMI-------ETERYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF IF ++ G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 YISWYDFTCEIFKQA----GYDTKVVPVTTAEYGISKAARPFNSRLDKSKLVENGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ V L I Sbjct: 290 TWQDAVARYLKEI 302 >gi|300853734|ref|YP_003778718.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] gi|300433849|gb|ADK13616.1| dTDP-4-dehydrorhamnose reductase [Clostridium ljungdahlii DSM 13528] Length = 295 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 25/303 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+A L + V D E+ + ++D+ K D +F Sbjct: 1 MKVLITGGKGQLAGQLRKILVSGKSEIGALDKVYSDAEVRFPNKRELDITKLADVRNFVT 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 ++P +IIN AAYT VDK E + E A +N+ GA +A A+ + I I+ISTDYVF+G Sbjct: 61 DYAPSIIINCAAYTNVDKCETDFESALKVNSLGARNLALASQNTKIRLIHISTDYVFNGR 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E+ +P+++YGK+KL GE+ + + Y I+RT+W+Y ++G NF+ ++L+ AK Sbjct: 121 GTVPFREYDLPDPVSVYGKTKLLGEQYIKENCSRYFIVRTSWLYGLYGKNFVYTILKAAK 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER + VV DQ G PT+A +A I+++A T G++H T + G SW DFA Sbjct: 181 ERGHLDVVNDQRGNPTNAEDLAYHILKLAL-------TDEYGVYHCTGN-GECSWYDFAC 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V + ++ A RP +S LD L T + WK+ +++ + Sbjct: 233 KIVDYA----GIDCTVSPMTSENLNRAAKRPEFSSLDNMMLRCTIGDNMRHWKDALKSFI 288 Query: 288 VNI 290 + Sbjct: 289 QKL 291 >gi|161613224|ref|YP_001587189.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551042|ref|ZP_02344797.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|198242562|ref|YP_002216183.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353239|ref|YP_002227040.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857532|ref|YP_002244183.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161362588|gb|ABX66356.1| hypothetical protein SPAB_00934 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197937078|gb|ACH74411.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273020|emb|CAR37968.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324048|gb|EDZ11887.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206709335|emb|CAR33675.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326623930|gb|EGE30275.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628326|gb|EGE34669.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 299 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|317055133|ref|YP_004103600.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] gi|315447402|gb|ADU20966.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] Length = 295 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 152/305 (49%), Gaps = 26/305 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD----------IDLLKPKDFASFFLSF 49 MK V G GQ+ + + + E + D +D+ + Sbjct: 1 MKIFVTGIGGQLGYDVINELKKRGHEAVGSDIFDGVEQDVEYRKLDITDKEAVEKTLTEV 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +I+ AA+TAVD AEDE + +IN +G IA + I ISTDYVF+G Sbjct: 61 RPDAVIHCAAWTAVDAAEDEENLPKVRAINVDGPQNIANVCKKLDCKMIQISTDYVFNGQ 120 Query: 108 SRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 TP PLN+YG+SKL GE VA+ Y I+R AWV+ + G+NF+ +ML + Sbjct: 121 GETPWQPDCKDYAPLNVYGQSKLDGELAVANTLEKYFIVRIAWVFGVNGNNFIKTMLNVG 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K+ E+ VV DQ GTPT +AR ++ +A ++ G +H T +GG +SW DF Sbjct: 181 KKYPEVRVVNDQIGTPTYTFDLARLLVDMA-------ESDKYGYYHATNEGGYISWYDFT 233 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 IF ++ G +KV + T +Y +KA RP S LD SKLA + TW++ V Sbjct: 234 CEIFRQA----GYDTKVTPVTTAEYGLSKAARPFNSRLDKSKLAENGFEPLPTWQDAVAR 289 Query: 286 ILVNI 290 L I Sbjct: 290 YLKEI 294 >gi|257090457|ref|ZP_05584818.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis CH188] gi|256999269|gb|EEU85789.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis CH188] Length = 280 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E I ++D+ + P+VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYISTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|282801702|gb|ADB02812.1| RmlD [Escherichia coli] Length = 299 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPDGVAETIRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 DIPLALNKLNAVPTTAYPTPACRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|291527357|emb|CBK92943.1| dTDP-4-dehydrorhamnose reductase [Eubacterium rectale M104/1] Length = 313 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 106/318 (33%), Positives = 154/318 (48%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + + E I +D+ Sbjct: 1 MKVFVTGVAGQLGHDVMNDLAARGYEGIGTDIAPQYSGADDGTAVTTMPYVSLDITDRDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PDV+++ AA+TAVD AED+ + A +INA+G IA A I +YIS Sbjct: 61 VEKTITELKPDVVVHCAAWTAVDLAEDDDKKAKVHAINADGTQNIADACKKIDAKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP PLN+YG++KL GE VA+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWQPDCKDYAPLNVYGQTKLDGELAVANTLEKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K +++VV DQ GTPT L ++R ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHDKLTVVSDQIGTPTYTLDLSRLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ E G V + T +Y +KA RP S LD SKL Sbjct: 234 YISWYDFTKEIFKQAVELGHTEYSEDRLTVAPVTTAEYGVSKAARPFNSRLDKSKLVENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 FNPLPTWQDALHRYLQEI 311 >gi|217970540|ref|YP_002355774.1| dTDP-4-dehydrorhamnose reductase [Thauera sp. MZ1T] gi|217507867|gb|ACK54878.1| dTDP-4-dehydrorhamnose reductase [Thauera sp. MZ1T] Length = 296 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 119/297 (40%), Positives = 167/297 (56%), Gaps = 10/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L ++ + R D L S +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPVGTVVALDRGGADGLHGDLEDLDGIDRTVRSLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + E A INAE G +A+AA ++G ++ STDYVFDG TP E Sbjct: 61 NAAAYTAVDKAETDVERAQRINAEAPGVLARAAATVGALLVHYSTDYVFDGSGDTPWREN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG+SKLAGEE + + ++ILRT+WVY+ G NF +MLRLA ER ++V+ Sbjct: 121 APTAPLSVYGRSKLAGEEAIRAAGCRHLILRTSWVYAARGGNFARTMLRLAAERERLTVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA E++D SL G +H+ A GG SW +A ++ ++ + Sbjct: 181 ADQHGAPTGAELIADVSAHALR--AEHADRSLGGTYHLAA-GGETSWHGYASFVIEQARK 237 Query: 236 RGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ I T+ YPT A RP S LD S+L + + W++GV +L I Sbjct: 238 LGATLKAGEIAPIGTRDYPTAAARPLNSRLDTSRLRERFGLALPDWRDGVARMLREI 294 >gi|42780412|ref|NP_977659.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10987] gi|42736331|gb|AAS40267.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10987] Length = 284 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHIS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|239503783|ref|ZP_04663093.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose [Acinetobacter baumannii AB900] Length = 301 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 148/301 (49%), Gaps = 12/301 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVI 54 MK L++G NGQ+ L E+I + R DL P++I Sbjct: 1 MKILLLGKNGQVGWELQRALQPLGEVIALDRSTSLDGLSGDLANFDQIKQTIEKVQPNII 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVDKAE + E A IN +A+ + I I+ STDYVF+G E Sbjct: 61 VNAAAYTAVDKAESDQENADLINHLAVKNLAELCQTHHILLIHYSTDYVFNGEGTKAWSE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 TNP+N+YG +K GE + ++ RT WVY G+NF+ +ML+LA R E+S+ Sbjct: 121 SDLTNPINLYGNTKRLGEIALEQSGCAFINFRTCWVYGSHGNNFIKTMLKLASNREELSI 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHN---LIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + DQ G PT A IA Q + L G +H+ A G SW D+A+++F Sbjct: 181 IHDQIGAPTGAALIADVTAQALKYYSLMDAQQQKDLLGHYHLAA-AGECSWFDYAQFVFE 239 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + ++G + KV I T YPT A RP S L+ +KL I + WK GV +L Sbjct: 240 LAKQKGQSLAIQKVNAIETTAYPTPAKRPLNSRLNTNKLQANFKIHLPNWKLGVAQVLEE 299 Query: 290 I 290 I Sbjct: 300 I 300 >gi|187880657|gb|ACD37159.1| RmlD [Escherichia coli] gi|187880666|gb|ACD37167.1| RmlD [Escherichia coli] gi|187880675|gb|ACD37175.1| RmlD [Escherichia coli] Length = 299 Score = 322 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A GG +W D+A +F E+ Sbjct: 181 DQFGAPTGAELLADCTAHAIR--VAANKPEVAGLYHLVA-GGTTTWHDYAALVFEEARRA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GINLALNKLNAVPTTAYPTPARRPYNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|16765426|ref|NP_461041.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991011|ref|ZP_02572110.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168242169|ref|ZP_02667101.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194448060|ref|YP_002046146.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197264888|ref|ZP_03164962.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|132498|sp|P26392|RMLD_SALTY RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|21730455|pdb|1KBZ|A Chain A, Crystal Structure Of Apo-Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) From Salmonella Enterica Serovar Typhimurium gi|21730457|pdb|1KC1|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadph gi|21730458|pdb|1KC3|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadph And Dtdp-L-Rhamnose gi|24987882|pdb|1N2S|A Chain A, Crystal Structure Of Dtdp-6-Deoxy-L-Lyxo-4-Hexulose Reductase (Rmld) In Complex With Nadh gi|47890|emb|CAA40116.1| dTDP-6-deoxy-L-mannose dehydrogenase [Salmonella enterica] gi|16420628|gb|AAL21000.1| TDP-rhamnose synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406364|gb|ACF66583.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197243143|gb|EDY25763.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205330551|gb|EDZ17315.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205338312|gb|EDZ25076.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261247311|emb|CBG25136.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994150|gb|ACY89035.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158657|emb|CBW18169.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913087|dbj|BAJ37061.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224744|gb|EFX49807.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130419|gb|ADX17849.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989031|gb|AEF08014.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 299 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + ++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|256617235|ref|ZP_05474081.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 4200] gi|256596762|gb|EEU15938.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 4200] gi|295113355|emb|CBL31992.1| dTDP-4-dehydrorhamnose reductase [Enterococcus sp. 7L76] Length = 280 Score = 322 bits (826), Expect = 3e-86, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P+VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + GI+H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGIYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|227887093|ref|ZP_04004898.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 83972] gi|227835443|gb|EEJ45909.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli 83972] gi|297499071|gb|ADI43257.1| RmlD [Escherichia coli] gi|307554112|gb|ADN46887.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli ABU 83972] Length = 299 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGSGDRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 DIPLALNKLNAVPTTAYPTPACRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|312953333|ref|ZP_07772175.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0102] gi|310628721|gb|EFQ12004.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0102] gi|315154453|gb|EFT98469.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0031] Length = 299 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + S+ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------SEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|307272373|ref|ZP_07553629.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0855] gi|307286606|ref|ZP_07566698.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0109] gi|306502317|gb|EFM71598.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0109] gi|306510927|gb|EFM79941.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0855] gi|315164322|gb|EFU08339.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1302] Length = 299 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSKELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|29376699|ref|NP_815853.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis V583] gi|227520246|ref|ZP_03950295.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0104] gi|227555321|ref|ZP_03985368.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HH22] gi|29344163|gb|AAO81923.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis V583] gi|227072325|gb|EEI10288.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0104] gi|227175532|gb|EEI56504.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HH22] gi|315575178|gb|EFU87369.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0309B] gi|315582605|gb|EFU94796.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0309A] Length = 299 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 156/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R ++ VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLKVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|332293420|ref|YP_004432029.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter diaphorus 4H-3-7-5] gi|332171506|gb|AEE20761.1| dTDP-4-dehydrorhamnose reductase [Krokinobacter diaphorus 4H-3-7-5] Length = 297 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 156/292 (53%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V G GQ+ +L D E I + R D+D+ + + PDV+IN AA Sbjct: 14 KIVVTGALGQLGMALLEQSKHHADFEYIFLSRKDLDITSRDNISIVLDKHQPDVVINTAA 73 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ + AF IN G +A+ I+ISTDYVFDG T E N Sbjct: 74 YTAVDAAEDDKDQAFLINEAAVGYLAEECKKRKCALIHISTDYVFDGDKSTAYVESDKPN 133 Query: 120 PLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE+ + AS Y I+RT+WVYS++G NF+ +MLRL +ER ++SVV DQ Sbjct: 134 PQTVYGASKLGGEQLIEASNITKYAIIRTSWVYSVYGHNFVKTMLRLGEERGQLSVVNDQ 193 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A I+ +A L E+S G++H + + G ++W DFA+ IF + Sbjct: 194 LGCPTWANDLADTILTVARELKEDS----FGVYHFS-NKGSITWYDFAKAIFEHAQ---- 244 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + +PTK RP S LD K+ + W ++ +L + Sbjct: 245 IDVLITPVTSDLFPTKTKRPKNSVLDTHKIEKQFKVDTPEWSSSLQKMLKRL 296 >gi|258540228|ref|YP_003174727.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus Lc 705] gi|56684477|gb|AAW22446.1| RmlD [Lactobacillus rhamnosus] gi|56684497|gb|AAW22464.1| RmlD [Lactobacillus rhamnosus] gi|257151904|emb|CAR90876.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus Lc 705] Length = 280 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE I +N +G +AKAA+ + +YISTDYVFDG S+ Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSKEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 228 KDVTVKPVSSKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|302874989|ref|YP_003843622.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] gi|307690393|ref|ZP_07632839.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] gi|302577846|gb|ADL51858.1| dTDP-4-dehydrorhamnose reductase [Clostridium cellulovorans 743B] Length = 278 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 157/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NGQ+ + L+ ++VE+I ++D+ K + + + PDV+IN AA Sbjct: 1 MRILITGANGQLGRELTKQYRNENVELILTDVDNLDITKVDEVFNIMIEKRPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVDK E++ E A+ IN G +A AA +IG + +STDYVFDG P+ EF TN Sbjct: 61 HTAVDKCEEDVENAYRINTIGPKNLAAAAFAIGAEIVQVSTDYVFDGEGNAPLTEFDRTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG++KL GEE V S + ++RTAW+Y G+NF+ +M++L + E+ VV DQ Sbjct: 121 PQTVYGETKLQGEELVKSLNPRHYVVRTAWLYGD-GNNFVKTMIKLGESGNEVKVVSDQV 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTS + +A I + N G FH T G SW DFA+ IF Sbjct: 180 GSPTSTVDLANVIRDLIKN-------KNYGTFHATCK-GMCSWFDFAQEIF----RLKNM 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ T+++P A RP YS L L T WKE ++ L + Sbjct: 228 DVKLVPCTTEEFPRPAKRPKYSVLRNYSLELTTGDITRDWKESLKEYLATL 278 >gi|296136996|ref|YP_003644238.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12] gi|295797118|gb|ADG31908.1| dTDP-4-dehydrorhamnose reductase [Thiomonas intermedia K12] Length = 302 Score = 322 bits (826), Expect = 4e-86, Method: Composition-based stats. Identities = 109/297 (36%), Positives = 158/297 (53%), Gaps = 9/297 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G +GQ+ L + ++ + R DL + P++I+N AAYT Sbjct: 5 RILLLGADGQVGWELRRALLPLGDVRPLNRTQADLGDLDALRTVLQREQPELIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPTN 119 AVDKAE +PE+A INA G +A A ++ STDYVFDG P E N Sbjct: 65 AVDKAETDPELAQRINAAAPGVLAAWAAEHHAMLVHYSTDYVFDGAKPAPGSYTEADTPN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG+SKLAGE+ + + ++ILRT+WVY+ G NF +ML+LA ER + V+ DQF Sbjct: 125 PQSAYGRSKLAGEQAITASGCRHLILRTSWVYAARGGNFAKTMLKLAAERDSLRVIADQF 184 Query: 180 GTPTSALQIARAIIQIAHNLIENS--DTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 G PTSA IA Q+ L + G++H+TA G SW +A+++ + RG Sbjct: 185 GAPTSAELIADVTAQMLQRLRTDPALAAQASGLYHLTAQ-GSTSWHGYAQFVIAAAKARG 243 Query: 238 GPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P V I T YP A RPA S LDCSKL T ++ + W+ V+ ++ + Sbjct: 244 LPLRCASEHVQAITTADYPLPAPRPANSRLDCSKLQTTFDLFLPPWQTQVQRLIDEL 300 >gi|283785860|ref|YP_003365725.1| dTDP-4-dehydrorhamnose reductase [Citrobacter rodentium ICC168] gi|282949314|emb|CBG88925.1| dTDP-4-dehydrorhamnose reductase [Citrobacter rodentium ICC168] Length = 299 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPLGNLIALDVRSTDYCGDFSDPEGVVETVRRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA+ AIAKAA +G ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAETEVEFAQLLNAKSVEAIAKAAQEVGAWVVHYSTDYVFPGTGETPWRETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + ++ + ++I RT+WVY+ G+NF +MLRLAKER E+SV+ Sbjct: 121 ATAPLNVYGETKLAGEKALQTHCSRHLIFRTSWVYAGKGNNFAKTMLRLAKERTEMSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +IF E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVAMVKPEVA--GLYHLVA-SGTTTWYDYASFIFAEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + + T YPT A RPA S L+ K + ++ + W+ GV+ +L + Sbjct: 238 GMNLALRDLKAVPTSAYPTPARRPANSRLNTDKFQQSFDLVLPQWEAGVKRMLDEL 293 >gi|56684537|gb|AAW22500.1| RmlD [Lactobacillus rhamnosus] Length = 280 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 153/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + + + D+D+ +F + P+V+ + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDARGMTYRATDAKDLDITDEAAVNQYFADYQPEVVYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE I +N +G +AKAA+ + +YISTDYVFDG S Sbjct: 61 YTAVDKAEDEAKAINQLVNVDGTRNLAKAAEKVDATLVYISTDYVFDGDSEEIYTVNDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLNLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + ++ GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKTLAEFMTFAVDKRLD------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + +K+YP KA RP +S LD SK T I TW++ ++N L +I Sbjct: 228 KDVTVKPVSSKEYPQKAWRPRHSILDLSKTKAT-GFEIPTWQDALKNFLKSI 278 >gi|315171509|gb|EFU15526.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1342] Length = 299 Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P+VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|298375208|ref|ZP_06985165.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|301310779|ref|ZP_07216718.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|298267708|gb|EFI09364.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_19] gi|300832353|gb|EFK62984.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 302 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 102/303 (33%), Positives = 144/303 (47%), Gaps = 17/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD--------IDLLKPKDFASFFLSFSP 51 M LV G NGQ+ + + + D + +D+ + + Sbjct: 1 MNILVTGANGQLGNEMRIIARESDDHYVFTDVNQVEGVETGFLDITDLEAVRKMVAAQRV 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRT 110 DVI+N AAYT VD AE E+ +NAE +AK + ISTDYVF Sbjct: 61 DVIVNCAAYTNVDMAESNEELVEKLNAEAPENLAKVMKETNGFLVQISTDYVFGKEPCNV 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E P +YG SKL GE+K+ + +VI+RTAW+YS FG NF +M+ L + Sbjct: 121 PCQEDQQGTPTGVYGMSKLHGEQKIQAIGCKHVIIRTAWLYSEFGKNFCKTMMNLTATKP 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIEN---SDTSLRGIFHMTADGGPVSWADFAE 227 + VV DQ GTPT AL +A+AI + + + D GI+H + + G SW DF + Sbjct: 181 HLKVVFDQVGTPTYALDLAKAIETVLKDYADKKNEHDYDKTGIYHYSNE-GVCSWFDFTK 239 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G V + ++P+ RP YS LD SK+ T IRI W E +R + Sbjct: 240 SI---AEYNGTTACDVQPCHSDEFPSPVKRPFYSVLDKSKIKETFGIRIPYWTESLRQCI 296 Query: 288 VNI 290 NI Sbjct: 297 ANI 299 >gi|291525902|emb|CBK91489.1| dTDP-4-dehydrorhamnose reductase [Eubacterium rectale DSM 17629] Length = 313 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 105/318 (33%), Positives = 154/318 (48%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + + E I +D+ Sbjct: 1 MKVFVTGVAGQLGHDVMNDLAARGYEGIGTDIAPQYSGADDGTSVTTMPYVSLDITDRDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PDV+++ AA+TAVD AED+ + A +INA+G IA A I +YIS Sbjct: 61 VEKTITELKPDVVVHCAAWTAVDLAEDDDKKAKVHAINADGTQNIADACKKIDAKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP PLN+YG++KL GE VA+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWQPDCKDYAPLNVYGQTKLDGELAVANTLEKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K +++VV DQ GTPT L ++R ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHDKLTVVSDQIGTPTYTLDLSRLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ E G V + T +Y +KA RP S LD +KL Sbjct: 234 YISWYDFTKEIFKQAVELGHTEYSEDRLTVAPVTTAEYGVSKAARPFNSRLDKNKLVENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 FKPLPTWQDALHRYLQEI 311 >gi|17545402|ref|NP_518804.1| dTDP-4-dehydrorhamnose reductase oxidoreductase [Ralstonia solanacearum GMI1000] gi|17427694|emb|CAD14213.1| probable dtdp-4-dehydrorhamnose reductase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 305 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 112/295 (37%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 KLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTRPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGMAAGVLAEEARALGSLLVHYSTDYVFDGSKAAAYVETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKVRGLE 248 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S +D KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMDTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|329569824|gb|EGG51583.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1467] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|168481240|gb|ACA24735.1| RmlD [Escherichia coli] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 161/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E + Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAN 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|295098218|emb|CBK87308.1| dTDP-4-dehydrorhamnose reductase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A + PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSKDYCGDFSNPEGIAETVRNIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAK A IG ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPDFAQLLNATSVEAIAKEAAKIGAWVVHYSTDYVFPGDGETPWSETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE+ + N++I RT+WVY+ G+NF +MLRLAKER+E+SV+ Sbjct: 121 ATAPLNVYGQTKLNGEKALQDNCPNHLIFRTSWVYAGKGNNFAKTMLRLAKERKELSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N + + G++H+ A SW D+A +F E+ + Sbjct: 181 DQVGAPTGAELLADCTAHAIRVAMVNPEVA--GLYHLVASE-TTSWYDYAALVFEEAQKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K N+ + W GV+ +L + Sbjct: 238 GIELAIEKLNAVPTTAYPTPARRPHNSRLNTMKFQQNFNLVLPAWHVGVKRMLAEL 293 >gi|300692302|ref|YP_003753297.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum PSI07] gi|299079362|emb|CBJ52034.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum PSI07] Length = 305 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 110/295 (37%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + E AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDAETAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGSKAGAYVESDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-AGETTWHGYATAVLRYAKARGLE 248 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S ++ +KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMNTAKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|293382818|ref|ZP_06628739.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis R712] gi|293387973|ref|ZP_06632506.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis S613] gi|312905901|ref|ZP_07764915.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 512] gi|312908951|ref|ZP_07767814.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 516] gi|291079809|gb|EFE17173.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis R712] gi|291082629|gb|EFE19592.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis S613] gi|310628068|gb|EFQ11351.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 512] gi|311290735|gb|EFQ69291.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DAPTO 516] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAVDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|229549530|ref|ZP_04438255.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 29200] gi|256853641|ref|ZP_05559006.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T8] gi|307270365|ref|ZP_07551670.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4248] gi|307292432|ref|ZP_07572288.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0411] gi|3608397|gb|AAC35923.1| putative dTDP-4-keto-L-rhamnose reductase [Enterococcus faecalis OG1RF] gi|229305348|gb|EEN71344.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ATCC 29200] gi|256710584|gb|EEU25627.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T8] gi|306496561|gb|EFM66122.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0411] gi|306513273|gb|EFM81900.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4248] gi|315025873|gb|EFT37805.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2137] gi|315028188|gb|EFT40120.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4000] gi|315035722|gb|EFT47654.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0027] gi|315146140|gb|EFT90156.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX2141] gi|315146323|gb|EFT90339.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX4244] gi|315160177|gb|EFU04194.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0312] gi|315161850|gb|EFU05867.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0645] gi|315173062|gb|EFU17079.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1346] gi|327535584|gb|AEA94418.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis OG1RF] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|288816243|gb|ADC54963.1| RmlD [Escherichia coli] Length = 299 Score = 322 bits (825), Expect = 5e-86, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 162/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ + +I + PD D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWEIKRALAPLGNLIALDVHSPDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|152979832|ref|YP_001353940.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] gi|151279909|gb|ABR88319.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] Length = 298 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 108/298 (36%), Positives = 150/298 (50%), Gaps = 16/298 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ L +++ + R +DL S P +I+NPAAY Sbjct: 1 MKILLTGRNGQVGYELERTLQGLGQVVALDRAQMDLSDLDQVRSVIREVKPQLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A INA+ IA+ A +G I+ STDYVFDG E NP Sbjct: 61 TAVDLAEREVELAMRINAQAPEVIAQEAKKLGAGMIHYSTDYVFDGDQTGSYTEDDVPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ V + ++ILRT+WVY G NFLL++ RLA+ER E+ +V DQFG Sbjct: 121 QSVYGRSKLAGEQAVQAAGIPHLILRTSWVYGARGKNFLLTVRRLAQERDELRIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDT------------SLRGIFHMTADGGPVSWADFAEY 228 PT IA A + S T + G++H++A G SW + Sbjct: 181 APTWCRTIAEATAHALIQMQRYSGTQKDAGLDQDVWLNRGGLYHLSAQ-GRTSWHGLTQA 239 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 I + P ++ I T+ YP A RPA S L C + T + W E ++ Sbjct: 240 ILAHPSISKKP--RLTPISTQDYPLPARRPANSSLSCERFMQTF-CGLPEWDEALKLC 294 >gi|16611738|gb|AAL27323.1|AF402313_3 dTDP-6-deoxy-L-mannose-dehydrogenase [Shigella boydii] Length = 299 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAK A+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKTANEVGAWVIHYSTDYVFPGTGEIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLNIYG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNIYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEAARNA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|291617822|ref|YP_003520564.1| RfbD [Pantoea ananatis LMG 20103] gi|291152852|gb|ADD77436.1| RfbD [Pantoea ananatis LMG 20103] gi|327394238|dbj|BAK11660.1| probable dTDP-4-dehydrorhamnose reductase RfbD [Pantoea ananatis AJ13355] Length = 311 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + L D + G ++D+ F PDVI+N AAY Sbjct: 24 MRVLLTGAYGQLGRCLLDRFPADWITLACGSAELDITDRCAVMRVVKKFKPDVIMNAAAY 83 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A +NA G +A+AA + I+ISTDYVFDGL +T E P P Sbjct: 84 TAVDKAETDRTRALKVNAIGPENLAQAAKLVNARLIHISTDYVFDGLKKTSYSENDPPCP 143 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK GE++V +++RT+W++S +G+NF+ +MLRLA+ R E+ VV DQ+G Sbjct: 144 INFYGLSKWEGEKRVFEALPEAIVIRTSWMFSEYGNNFVSTMLRLAQTRSELHVVNDQYG 203 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A A+I +A GI+H D VSW +FA+ IF + + Sbjct: 204 CPTYAGDLAEAMIHLA------GSPENMGIYHYCGDI-AVSWCEFAQAIFVAAEKE---- 252 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I + QYP+ A RPA S L+ + + I S W+E + L Sbjct: 253 VNVRGITSSQYPSAATRPARSILNTEHITSA-GITASDWQEQLITCLK 299 >gi|256762993|ref|ZP_05503573.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T3] gi|256684244|gb|EEU23939.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T3] Length = 280 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P+VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|94264208|ref|ZP_01288004.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] gi|93455383|gb|EAT05584.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium MLMS-1] Length = 290 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 165/289 (57%), Gaps = 9/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ + L++ E + VGR ++D++ +FF + P ++N AAYT Sbjct: 3 RVLITGAGGQLGRELAARL--GPEQLAVGRQELDIVDGLAVKAFFKAHHPVAVVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPE AF +N +GA +A AA+S+ IP I+ISTD+VF G +P E PL Sbjct: 61 AVDRAESEPEDAFLVNEQGAVNLAMAAESLDIPLIHISTDFVFAGRKSSPYVESDRPAPL 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SKLAGE V + +++RT W+Y++ G NF+ ++L A+ER ++ VV DQ G+ Sbjct: 121 SVYGRSKLAGERGVLAACPRSLVIRTGWLYAVHGRNFVNTVLYYARERGQLRVVADQVGS 180 Query: 182 PTSALQIARAIIQI--AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT +A I +I A L N + IFH A+ G +W DFA I S Sbjct: 181 PTYTGDLAAVIAKILAARGLDGNKRMATSRIFHY-ANEGVATWYDFACAIIEIS----NL 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T++YPT A RP YS L+ SK+ +T + I W+ + + Sbjct: 236 PCIVEPVSTQEYPTVARRPPYSVLNKSKIKDTLGLVIPGWRSSLELCMA 284 >gi|256820039|ref|YP_003141318.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea DSM 7271] gi|256581622|gb|ACU92757.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga ochracea DSM 7271] Length = 280 Score = 321 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 149/283 (52%), Gaps = 9/283 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G +GQ+ + + + +D+ + +F + VI+N AAY Sbjct: 1 MNVLVTGGSGQLGSEIQANPHKKSCYYFTDINSLDICDVQAIRAFVQLNNIGVIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A IN +A +P I+ISTDYVF G TP E PT P Sbjct: 61 TNVDKAEDDSALATLINHTAVENLATVCKEHNLPLIHISTDYVFGGSKNTPYTETDPTTP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG +KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL+ ER E+ VV DQ Sbjct: 121 LGVYGCTKLAGEQVIQQAGIEHLIIRTAWLYSLRFGHNFVKTIQRLSAERTELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A I+Q NL ++H + + G SW DFA I +S G Sbjct: 181 GTPTNASDLADFIVQAVENLWYKGKRE---VYHFSNE-GVCSWYDFAVTIVAQS----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 KV + ++P+K RPAYS LD +KL N I W+ Sbjct: 233 NCKVLPCRSDEFPSKVTRPAYSVLDKTKLKKDFNYPIPHWRHS 275 >gi|93115470|gb|ABE98430.1| dTDP-4-dyhydrorhamnose reductase [Escherichia coli] Length = 299 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRMALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S LD K + + WK GV+ +L + Sbjct: 238 GIALALNKLNAVPTTAYPTPARRPHNSRLDTEKFQQNFALVLPDWKIGVKRMLNEL 293 >gi|257422095|ref|ZP_05599085.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis X98] gi|307281877|ref|ZP_07562092.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0860] gi|257163919|gb|EEU93879.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis X98] gi|306503831|gb|EFM73053.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0860] gi|315157129|gb|EFU01146.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0043] Length = 299 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 297 >gi|110833772|ref|YP_692631.1| dTDP-4-dehydrorhamnose reductase [Alcanivorax borkumensis SK2] gi|110646883|emb|CAL16359.1| dTDP-4-dehydrorhamnose reductase [Alcanivorax borkumensis SK2] Length = 304 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 156/295 (52%), Gaps = 10/295 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVIINP 57 L++G NGQ+ L ++I + R D+ PDV++N Sbjct: 10 ILLLGKNGQVGWELQRALAPFGQLIALDRAGQNGWCGDIGNLDGLRETIEHIKPDVLVNA 69 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 A YTAVD+A+ EPE+A +N + +A+ + G ++ STDYVFDG P E Sbjct: 70 AGYTAVDQAQSEPELAERLNHQAPALMAELMKAHGGWLVHYSTDYVFDGSGNQPWKETDS 129 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YG +KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER ++V+ D Sbjct: 130 AGPLNVYGATKLAGEQAIQASGCQHLIFRTSWVYASRGNNFAKTMLRLAKERDTLNVIDD 189 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT A IA + D S G++H+ A G SW D+A Y+F + G Sbjct: 190 QIGAPTGAELIADVTAHALRQWQQQPDVS--GLYHLAA-SGETSWYDYACYVFGWAQNEG 246 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I ++ YP A RP S LD KL T N+++ WK+GV +++ + Sbjct: 247 LPLAIQSVNPILSEDYPVPAIRPKNSRLDGQKLETTFNLQLPEWKQGVEHMMSEV 301 >gi|256961444|ref|ZP_05565615.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Merz96] gi|256951940|gb|EEU68572.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Merz96] Length = 280 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAVDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|255533798|ref|YP_003094170.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] gi|255346782|gb|ACU06108.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] Length = 284 Score = 321 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV+G +GQ+ Q L + + I ++L + F P +IN A Sbjct: 1 MKILVLGASGQLGQCLKKVAAERNISNISFPDESKANILDTALLQTLFTEEMPTHVINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E+ IN +GA IA I++STD+VF G + E Sbjct: 61 AYTAVDKAEDDVELCRKINKDGALNIAGLCKENKATLIHVSTDFVFKGDKPELLKEDDLA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+NIYG +KL GE+ V + + ILRT+W+YS + +NF+ +MLRL +R ++V+ DQ Sbjct: 121 EPINIYGLTKLEGEQDVINNLKEHFILRTSWLYSEYANNFVKTMLRLGADRDVLNVIADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A+ +A AI+ I S G++H + + G SW DFA IF E GG Sbjct: 181 IGTPTYAIDLAGAILSIIE-----SGQKDYGVYHYSNE-GVTSWYDFAVGIF----ELGG 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T QYPTKA RP +S +D +K+ +T + I W++ ++ + + Sbjct: 231 TKIKVKPISTSQYPTKAIRPKFSVMDKTKIKSTFGLEIPYWRDSLQVCIARL 282 >gi|256963466|ref|ZP_05567637.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HIP11704] gi|256953962|gb|EEU70594.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis HIP11704] Length = 280 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSKELDITDADSTLAKVKEIQPSVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|257419745|ref|ZP_05596739.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T11] gi|257161573|gb|EEU91533.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T11] Length = 280 Score = 321 bits (823), Expect = 7e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 156/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R ++ VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLKVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|300770495|ref|ZP_07080374.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] gi|300762971|gb|EFK59788.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] Length = 286 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 163/292 (55%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L+ G NGQ+ L + QDVE + R + L + + + PD+II+ A Sbjct: 1 MKILITGANGQLGSELREIYNERQDVETFFLDRKQLPLEQTMLIQNILAMYEPDLIIHAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE EPE+A +IN + IA+ G I ISTDYVFDG S + E S Sbjct: 61 AYTAVDLAESEPELADAINHLASEQIAEYCAIHGTRLIAISTDYVFDGKSAVALSEDSSV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YGK+KL GE+ + + +I+RT+WVYS++G NF+ +M+RL ER EI VV DQ Sbjct: 121 GPISVYGKTKLKGEQIIQRLCPDAIIIRTSWVYSVYGKNFVKTMIRLMTEREEIGVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT+A +A AI+ I ++ GI+H + D G +SW DFA I + Sbjct: 181 IGSPTAAKDLASAIVHII-----DAAKWEGGIYHYSND-GEISWYDFALAI----KDFNR 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T YPT A RP +S LD SK+ + + WK+ +R L+ + Sbjct: 231 LSCNIRAISTNNYPTPAQRPQFSLLDKSKIKRIFGVNVPYWKDSLRQTLMQL 282 >gi|307720180|ref|YP_003891320.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] gi|306978273|gb|ADN08308.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] Length = 289 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 111/289 (38%), Positives = 154/289 (53%), Gaps = 12/289 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G NGQ+ L + + R +D+ K F + IIN AAY Sbjct: 4 ILITGANGQVGSELKELSCKYNAYNFFFTDRETLDITDNKAVKKFIEDNHINTIINTAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ A IN +A+ + I I+ISTDYVFDG + P E TNP Sbjct: 64 TAVDKAEDDVTNADKINHLAVKNLAQISKEKDIKLIHISTDYVFDGKNYKPYTEIDETNP 123 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YGK+KL GE+ + N +I+RT+WVYS FG+NF+ +MLRL KER + V+ DQ Sbjct: 124 NGVYGKTKLDGEKVLQEIKPKNSIIIRTSWVYSSFGNNFVKTMLRLGKERDGVGVIFDQV 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A+ I+ I + S I+H + + G +SW DFA+ I + Sbjct: 184 GTPTYARDLAKTILDIIPKI----QNSKLEIYHYSNE-GVLSWYDFAKEIIRMAK----L 234 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 K+ I TK+YPT A RP YS L+ +K+ T N+ I WK+ + L Sbjct: 235 DCKINPIETKEYPTPAARPYYSLLNKAKIKQTFNVIIPYWKDSLDTCLK 283 >gi|229154887|ref|ZP_04283001.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 4342] gi|228628445|gb|EEK85158.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 4342] Length = 284 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPVP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VDVLPLSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|326336357|ref|ZP_08202528.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691531|gb|EGD33499.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 287 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 159/292 (54%), Gaps = 11/292 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L+ G +GQ+A + V I + ++D+ SFF + +++IN Sbjct: 1 MKNILITGASGQLAMEIKQELNNSVSNNYIFTTKNELDVTDADKVNSFFKKNAVELVINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V+ +E + E A +N IA A G CI++STDYVF G TP E Sbjct: 61 AAYTNVNGSEIDKETANLVNHLAVKNIANACTEQGSACIHLSTDYVFAGEKNTPYAETDA 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T+PL YG++KL GE + +++ILRT+W+YS FG+NF+ ++LR++KER+EI VV D Sbjct: 121 TSPLGAYGQTKLLGESALQHSDVDFLILRTSWLYSAFGNNFVKNILRISKERKEIKVVFD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q TPT A +AR II + N + ++H + + G SW DFA I + Sbjct: 181 QVSTPTYAKDLARFIIFVIENKLYRGRQD---VYHFSNE-GVCSWYDFAVEILKLA---- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G KV T+ +PT A RPAYS LD +K+ + I W++ + +++ N Sbjct: 233 GSDCKVIPCRTEDFPTPAARPAYSVLDKAKVKTDFSFPIPYWRDSLVSLMTN 284 >gi|225075232|ref|ZP_03718431.1| hypothetical protein NEIFLAOT_00232 [Neisseria flavescens NRL30031/H210] gi|224953407|gb|EEG34616.1| hypothetical protein NEIFLAOT_00232 [Neisseria flavescens NRL30031/H210] Length = 287 Score = 321 bits (823), Expect = 8e-86, Method: Composition-based stats. Identities = 116/289 (40%), Positives = 164/289 (56%), Gaps = 8/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+A+ L +D E+I +D+ + +F PD I+N AAY Sbjct: 1 MRTLLTGAKGQLARCLRDRLPEDWELIATDSTSLDITDTEAVHHMIKNFQPDAIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+ E AF++NA +A AA + I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEENAEAAFAVNATAVHNLAAAARAAHARFIHISTDYVFDGEGKRPYRETDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SK+AGE + I+RT+W++S +GSNF+ +MLRLAKER +S+V DQ G Sbjct: 121 RSTYGQSKVAGELLALAAHPESTIVRTSWLFSEYGSNFVKTMLRLAKERDSLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A AII + TS RGIFH + +W +F + IF + + Sbjct: 181 CPTYAGDLAHAIISLLQQ-----PTSPRGIFHYCGNKS-ATWYEFTKAIFQTAHQLDDSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I T +YP A RPAYS +DCS+L I+ S W++ +R IL Sbjct: 235 RIPELNAITTDKYPLPAPRPAYSIMDCSRLETEFGIKPSDWQKALREIL 283 >gi|194290477|ref|YP_002006384.1| tdp-rhamnose synthetase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] gi|193224312|emb|CAQ70323.1| TDP-rhamnose synthetase, NAD(P)-binding [Cupriavidus taiwanensis LMG 19424] Length = 303 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 118/294 (40%), Positives = 160/294 (54%), Gaps = 7/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L ++ +GR DL +P PDVIINPAAYTA Sbjct: 9 LLITGSNGQVGFELRRSLAPLGRVVALGRAGCDLSRPDQIRRVVRECRPDVIINPAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E+AF+IN AG +A+ A ++G ++ STDYVFDG E P NP + Sbjct: 69 VDKAETEAELAFAINGTAAGVLAEEAKALGSLLVHYSTDYVFDGSKDGAYVETDPVNPQS 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGEE +A+ + ++LRT WV G NF +ML+L +ER + V+ DQFG P Sbjct: 129 VYGKSKLAGEEAIAAAGGHALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGAP 188 Query: 183 TSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 T+A IA QI N D T G++H+ A G +W +A + +A +G Sbjct: 189 TTASLIADVTAQIVARHWLNGDRRTFASGVYHLAA-AGETTWHAYATEVLRYAAAQGIEL 247 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S + I YP A RPA S LD KL T I + W++GV ++L I Sbjct: 248 KVDPSHIEAIPATAYPLPAPRPANSRLDTGKLRQTFGIHLPDWQQGVHHLLDQI 301 >gi|167837610|ref|ZP_02464493.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis MSMB43] Length = 298 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 113/291 (38%), Positives = 151/291 (51%), Gaps = 9/291 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L+ ++ R ++DL +PD I+NPAAYTA Sbjct: 8 ILLTGINGQVGHELARSLQGLGRVVAFDRCELDLSDLDATRRVVRDVAPDWIVNPAAYTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + A +NAE G +A+ A +G ++ STDYVFDG E NP N Sbjct: 68 VDKAEADVAAAMRLNAEVPGLLAEEAKRLGAALVHYSTDYVFDGTKVGAYVEDDCVNPQN 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGK KLAGE+ V + +++I RT+WVY G NFLL+MLRL ER E+SVV DQFG P Sbjct: 128 VYGKGKLAGEQAVVASGCHHLIFRTSWVYGTRGRNFLLTMLRLGAEREELSVVADQFGAP 187 Query: 183 TSALQIARAIIQIAHNLI------ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 T + IA + + + G++H+TA GG SW FAE IF S Sbjct: 188 TWSRTIAELTAHVLAQSVVTGAQQVDWWRERSGVYHLTA-GGVTSWHAFAEAIFAFSDLM 246 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P V I + YPT A RP S L +LA T + W++ +R L Sbjct: 247 NKPV--VRAILSSSYPTPAVRPLNSQLSNQRLAETFGVSAPDWRDALRLCL 295 >gi|312888931|ref|ZP_07748491.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM 18603] gi|311298449|gb|EFQ75558.1| dTDP-4-dehydrorhamnose reductase [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 321 bits (823), Expect = 9e-86, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 173/291 (59%), Gaps = 11/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G +GQ+ QSL + ++ E + + ++L F +++P+ IN AA Sbjct: 3 RIIVLGASGQLGQSLKFVTGENATGEFFFLAEEESNILDVNALTKAFATYNPNYCINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + + A +N +G IAK I++STD+VFDG S P+ E N Sbjct: 63 YTAVDKAEGDLDTARKVNRDGVENIAKLCKEFDTTLIHVSTDFVFDGNSPYPLSEMDTPN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG +KL GE ++ Y +NY ILRT+W+YS FG+NF+ +ML+LAKE+ E++++ DQ Sbjct: 123 PINAYGITKLEGEVVISEYIDNYYILRTSWLYSEFGANFVKTMLKLAKEKSELNIISDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A+ +A+AI+ I I + + + GI+H + + G SW DFA+ IF + G Sbjct: 183 GTPTYAIDLAQAIVAI----INSDNKAAYGIYHYSNE-GVASWYDFAKAIFDIA----GI 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V+ I T QYPT A RP +S +D K+ +T + I W+ ++ + + Sbjct: 234 AISVFPIRTSQYPTPAKRPVFSVMDKGKIKDTFKLDIPYWRYSLQGCIAKL 284 >gi|229545295|ref|ZP_04434020.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1322] gi|255972233|ref|ZP_05422819.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T1] gi|255975345|ref|ZP_05425931.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T2] gi|256956578|ref|ZP_05560749.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DS5] gi|257079504|ref|ZP_05573865.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis JH1] gi|257082116|ref|ZP_05576477.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis E1Sol] gi|257084731|ref|ZP_05579092.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Fly1] gi|257087323|ref|ZP_05581684.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis D6] gi|257416504|ref|ZP_05593498.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis AR01/DG] gi|294779043|ref|ZP_06744456.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis PC1.1] gi|300861372|ref|ZP_07107459.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TUSoD Ef11] gi|229309645|gb|EEN75632.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1322] gi|255963251|gb|EET95727.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T1] gi|255968217|gb|EET98839.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis T2] gi|256947074|gb|EEU63706.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis DS5] gi|256987534|gb|EEU74836.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis JH1] gi|256990146|gb|EEU77448.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis E1Sol] gi|256992761|gb|EEU80063.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis Fly1] gi|256995353|gb|EEU82655.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis D6] gi|257158332|gb|EEU88292.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis ARO1/DG] gi|294453873|gb|EFG22262.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis PC1.1] gi|300850411|gb|EFK78161.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TUSoD Ef11] gi|323481256|gb|ADX80695.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis 62] Length = 280 Score = 320 bits (822), Expect = 9e-86, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 62 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 122 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L N+ Sbjct: 230 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLENV 278 >gi|187934268|ref|YP_001887435.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B str. Eklund 17B] gi|187722421|gb|ACD23642.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B str. Eklund 17B] Length = 280 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 151/289 (52%), Gaps = 13/289 (4%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + +D+E + + D+D+ K + L+ P+ +I+ AAYT Sbjct: 2 ILVTGVNGQLGYDVVKELNKRDIECLGIDIKDLDITDDKAVNEYILNLKPECVIHCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAEDE EI +N G IAKA I +YISTDYVFDGL P + NPL Sbjct: 62 AVDKAEDEEEICTKVNVYGTENIAKACKEIDTKMVYISTDYVFDGLGDKPFEVDGNINPL 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGK+K GE KV + Y I+R +WV+ I G+NF+ MLRL E+ ++VV DQ G+ Sbjct: 122 SVYGKTKYKGELKVKEILDKYFIVRISWVFGINGNNFINIMLRLGAEKESLNVVSDQIGS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A + + + G++H T + SWA+FAE I + G Sbjct: 182 PTYTADLAPLLCDMVI-------SEKYGVYHATNER-TCSWAEFAEEIMKMA----GLNC 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I T +YPTKA RP S L L + + WK + L + Sbjct: 230 KINYIQTSEYPTKAVRPFNSRLSKKSLVDNGFELMPEWKNALERYLTEL 278 >gi|166031256|ref|ZP_02234085.1| hypothetical protein DORFOR_00943 [Dorea formicigenerans ATCC 27755] gi|166029103|gb|EDR47860.1| hypothetical protein DORFOR_00943 [Dorea formicigenerans ATCC 27755] Length = 316 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 150/318 (47%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK LV G GQ+ + + + E I + +D+ Sbjct: 1 MKVLVTGVAGQLGHDVMNELAKRGYEGIGSDIAESYNGIQDGTPVVSMPYVQMDITDKAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 + D +I+ AA+TAVD AEDE + ++NAEG IA+ + +Y S Sbjct: 61 VEKVLTEVNADAVIHCAAWTAVDLAEDEDKKDKVHAVNAEGTKNIAEVCKKLDSKMVYTS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G P PLN+YG+SKL GE V+ + Y I+R AWV+ G+NF Sbjct: 121 TDYVFNGQGEEPWQPDCKDYQPLNVYGQSKLDGELAVSETLDKYFIVRIAWVFGKNGNNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ K ++ VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLKVGKNHDKLRVVNDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ E+G V + T +Y +KA RP S LD KL Sbjct: 234 YISWYDFTKEIFRQAVEQGHTEYGEDRITVNPVTTAEYGVSKAARPFNSRLDKKKLVENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L + Sbjct: 294 FTPLPTWQDALGRYLKEL 311 >gi|325276926|ref|ZP_08142613.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] gi|324097941|gb|EGB96100.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] Length = 300 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 113/300 (37%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R DL + A+ +PD+I+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGAEGLCGDLSQADGLAATVRQLAPDIIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + +A INA+ +A+ A ++G ++ STDYVFDG P +E Sbjct: 61 NAAAYTAVDKAESDQALAAMINAQAPAVLAREAAALGAWLVHYSTDYVFDGSGDQPWEET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + T PL++YG++KL GE + + ++LRT+WVY+ G NF +MLRLA ER +SVV Sbjct: 121 AATGPLSVYGRTKLDGERGILASGAKALVLRTSWVYAARGHNFAKTMLRLAAEREGLSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG PT A IA I + D G++H+ A G SW FA+++ + Sbjct: 181 ADQFGAPTGAELIADVTAHILRQIFNGQDNRHLAGVYHLAA-AGETSWHGFAQFVLAHAQ 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV I T+ YP A RP S L +KL T N ++ W++GV+ +L I Sbjct: 240 RNGVALKVTADKVAPISTEAYPVPAPRPRNSRLALAKLEKTFNFKMPLWEQGVQRMLDEI 299 >gi|196037397|ref|ZP_03104708.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus NVH0597-99] gi|196031639|gb|EDX70235.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus NVH0597-99] Length = 284 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE + ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKDRDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|167757832|ref|ZP_02429959.1| hypothetical protein CLOSCI_00163 [Clostridium scindens ATCC 35704] gi|167664486|gb|EDS08616.1| hypothetical protein CLOSCI_00163 [Clostridium scindens ATCC 35704] Length = 313 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 154/318 (48%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK LV G GQ+ + + + E + + +D+ Sbjct: 1 MKVLVTGVAGQLGHDVMNELAKRGYEGVGSDIKETYSGIQDGTAVVSMPYVQMDITDEDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDV+++ AA+TAVD AEDE EI ++NA G IA+ + +Y+S Sbjct: 61 VRKVLTDAAPDVVVHCAAWTAVDLAEDEDKKEIVHAVNATGTKNIAEVCKELDCKMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG PLN+YG++KLAGE V+ + Y I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTEAWQPDCKDYKPLNVYGETKLAGELAVSETLSKYFIVRIAWVFGKNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML +AK +I+VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNIAKTHDKITVVNDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ E G V + T++Y +KA RP S LD SKL Sbjct: 234 YISWYDFTKEIFRQAVELGHEEYSEDKVNVIPVTTQEYGASKAARPFNSRLDKSKLPENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 FTPLPTWQDALNRYLKEI 311 >gi|315166503|gb|EFU10520.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX1341] Length = 299 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P+VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPNVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D SK +I TW+E + +L ++ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLSK-TEALGFKIPTWQEALAQMLESV 297 >gi|228932596|ref|ZP_04095475.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827065|gb|EEM72820.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 284 Score = 320 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|193222279|emb|CAL61334.2| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Herminiimonas arsenicoxydans] Length = 293 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ L EI+ + R +DL S P +IINPAAY Sbjct: 1 MKILLTGKTGQVGYELERTLQGLGEIVALDRQQMDLANLDQVRDVIRSVKPQLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE P++A INA+ G +A A +G I+ STDYVFDG E +P Sbjct: 61 TAVDLAESAPDLAMRINADAPGVMAAEAKKLGAAMIHYSTDYVFDGDKAESYTEEDVPHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SKLAGE+ + + ++ILRT+W+Y + G NFLL++ RLA+ER E+ +V DQFG Sbjct: 121 QSVYGRSKLAGEQAIQAAGIPHLILRTSWIYGLRGKNFLLTVQRLAQERDELRIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENS---------DTSLRGIFHMTADGGPVSWADFAEYIFW 231 PT + +A L ++ G++H+TA G SW F + I Sbjct: 181 APTWSRTLAEVTAHAICQLQGGGTQANVDHAAWSAHSGLYHVTAQ-GRTSWHGFTQAIIA 239 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S+ G KV I T+ YP A RP S L + R+ W+ ++ + Sbjct: 240 HSS--GLKQPKVTPIATQDYPLPAKRPQNSVLSSQRFMQAF-CRLPEWEAALKLCV 292 >gi|302870784|ref|YP_003839420.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis OB47] gi|302573643|gb|ADL41434.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor obsidiansis OB47] Length = 281 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 97/284 (34%), Positives = 146/284 (51%), Gaps = 12/284 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+ + + +D+ ++ + P +II+ AAYT Sbjct: 2 ILITGSKGQLGSEFIKQFENKYNVKGIDIEQVDITDLDSTVNYISAIKPSIIIHCAAYTN 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E + +IAF +NA G +A AA+ +G +YISTDYVFDG P +EF NP++ Sbjct: 62 VDGCERDKDIAFKVNAIGIRNVAMAAEKVGAKLVYISTDYVFDGEKEKPYNEFDRPNPIS 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG SKLAGEE V ++ + Y I+R AW+Y G+NF+ ++++LAKE+ EI VV DQ G P Sbjct: 122 IYGLSKLAGEEFVKTFCSRYFIVRIAWLYGENGNNFVKTIVKLAKEKGEIDVVNDQRGNP 181 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A+ + ++ GI+H+T + G SW DFA I G K Sbjct: 182 TFTKDVVQAVEVMM-------NSEKYGIYHVTNE-GIASWYDFACKIVDTF----GINCK 229 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++ A RP S LD L ++ W+E Sbjct: 230 VNPTTSDKFIRPAKRPKNSALDKMMLRLEFGYKMRRWEEAFEEF 273 >gi|329929646|ref|ZP_08283343.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. HGF5] gi|328935972|gb|EGG32427.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus sp. HGF5] Length = 294 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 99/293 (33%), Positives = 167/293 (56%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q ++ + + E+I GR ++++ + PD II+ AA Sbjct: 1 MKVLITGAHGQLGQDIARIFNLAGHEVISCGREELNITDLDQCLQVSSTRRPDWIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE + + A+ +NA G +A AA+ I ++ISTDYVF G S P +E+ + Sbjct: 61 YAAVDAAETDVDGAYLVNAVGTRNMALAAEKIDAKIVFISTDYVFSGTSERPYNEYDSPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YGKSKLAGE+ V + + + I+RT+W++ + G+NF+ +MLRL +E+ + VV DQ Sbjct: 121 PQSVYGKSKLAGEQMVQHFCSRWFIVRTSWLFGLHGNNFVKTMLRLGQEKPLLKVVNDQQ 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + +AH LI T GI+H ++ G +W +F IF E+ E+ G Sbjct: 181 GSPTYTVD-------LAHFLINLISTEKYGIYH-ASNSGSCTWYEFTSAIFEEAREQLGL 232 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ T+++P A RPA S +D + + W+EG++ ++++ Sbjct: 233 TITAELQPCTTEEFPRPAPRPANSVMDHLAIRLNQFEDLPHWREGLKQFMLDM 285 >gi|254523254|ref|ZP_05135309.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14] gi|219720845|gb|EED39370.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas sp. SKA14] Length = 297 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 154/302 (50%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q L ++ R D +P + Sbjct: 1 MTVLVFGGNGQVGQELLRSLAPLGVVVATTRSGQLPDGSPCEVADFAQPDSLTALLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P V++N AAYTAVD+AE E E AF+ N + G IA+ + +P ++ STDYVFDG Sbjct: 61 PTVVVNAAAYTAVDRAEQEVEAAFAANVQAPGVIARWCAAHDVPLVHYSTDYVFDGQGSA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG SK GE+ V ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDEPTAPLGVYGTSKRDGEDAVREAGGRHLIFRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA ++ + L G +H+TA G SW FAE IF Sbjct: 181 ALRVVADQIGTPTPAALIADVTVKALQH-----PGQLSGTWHLTA-SGQTSWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G V I + +YPT A RPA+S LD KL I + W++G++ ++ Sbjct: 235 AEALASGVLAKVPTVEAIASSEYPTPAKRPAWSVLDNRKLQRDFGIVLPVWQDGLKRVMA 294 Query: 289 NI 290 I Sbjct: 295 EI 296 >gi|168481305|gb|ACA24794.1| RmlD [Escherichia coli] Length = 299 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L V +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALVPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCVKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 DIPLALNKLNAVPTTAYPTSARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|9957840|gb|AAG09518.1|AF279620_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 163/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A+RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTSANRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|258647891|ref|ZP_05735360.1| dTDP-4-dehydrorhamnose reductase [Prevotella tannerae ATCC 51259] gi|260851724|gb|EEX71593.1| dTDP-4-dehydrorhamnose reductase [Prevotella tannerae ATCC 51259] Length = 289 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 12/290 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G GQ+ + + + + ++D+ +F ++ D IIN AAY Sbjct: 5 ILITGCKGQLGNEIQLLAPSYPEWTFYYTDKEELDITDLNAINTFIATYHIDTIINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++ +N A +A+A ++ I+ISTDYVFDG P E T P Sbjct: 65 TAVDKAESEEKLCNLLNHIAARNLAEAIAAVDGHFIHISTDYVFDGEHYLPYKEEDSTRP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYG++KL GE V V++RT+W+YS FG+NF+ +MLRL KE++++ V+ DQ G Sbjct: 125 QTIYGETKLKGETAVFKACPEAVVIRTSWLYSAFGNNFVKTMLRLGKEKQQLGVIFDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A+AI+ I + G++H + + G SW DF I + G Sbjct: 185 TPTYAHDLAKAILNIIQQGPQA------GLYHFSNE-GACSWFDFTRAIHRLA---GITT 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +YPT A RP YS LD +K+ T+ + I W++ +++ + + Sbjct: 235 CDVRPLHTTEYPTAAKRPNYSVLDKTKIKTTYKLTIPWWEDSLQDCIARL 284 >gi|261364731|ref|ZP_05977614.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa ATCC 25996] gi|288567031|gb|EFC88591.1| dTDP-4-dehydrorhamnose reductase [Neisseria mucosa ATCC 25996] Length = 287 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 167/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+A + E+I +D+ + SF PD I+N AAY Sbjct: 1 MRTLLTGSKGQLAHCFRDRLPDNWELIATDSSSLDITDADAVRNMVQSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE AF++NA +A AA S+ I+ISTDYVFDG S+TP E TNP Sbjct: 61 TAVDRAETNVPAAFAVNAAAVHNLADAARSVHARFIHISTDYVFDGTSKTPYREHDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K AGE + I+RT+W++S +G+NF+ +MLRLAKER +SVV DQ G Sbjct: 121 QSVYGRTKAAGELLALAANPESTIIRTSWLFSEYGNNFVKTMLRLAKERDSLSVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A+AII + + + +GI+H + V+W +F++ IF + + Sbjct: 181 CPTYAGDLAQAIITLLQH-----PSPSKGIYHFGGNKS-VTWYEFSQAIFQTALKHDNNF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I T QYP A RP YS +DC K+ N + I+ S W++ + +I+ + Sbjct: 235 KMPKLTPITTDQYPLPAPRPEYSIMDCRKIENDYGIKPSDWQKALNDIIGKL 286 >gi|300704903|ref|YP_003746506.1| tdp-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] gi|299072567|emb|CBJ43917.1| TDP-rhamnose synthetase, NAD(P)-binding [Ralstonia solanacearum CFBP2957] Length = 305 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYVETDTVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-SGETTWHGYATAVLRYAKARGLE 248 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|30261326|ref|NP_843703.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Ames] gi|47526496|ref|YP_017845.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184158|ref|YP_027410.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Sterne] gi|65318594|ref|ZP_00391553.1| COG1091: dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A2012] gi|165872857|ref|ZP_02217483.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0488] gi|167636153|ref|ZP_02394458.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0442] gi|167641233|ref|ZP_02399487.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0193] gi|170686734|ref|ZP_02877954.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0465] gi|170708895|ref|ZP_02899329.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0389] gi|177654464|ref|ZP_02936361.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0174] gi|190569153|ref|ZP_03022051.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis Tsiankovskii-I] gi|196036252|ref|ZP_03103651.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus W] gi|196044318|ref|ZP_03111554.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB108] gi|227815933|ref|YP_002815942.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CDC 684] gi|228913893|ref|ZP_04077518.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228944928|ref|ZP_04107289.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229601322|ref|YP_002865747.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0248] gi|254682613|ref|ZP_05146474.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CNEVA-9066] gi|254725410|ref|ZP_05187192.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A1055] gi|254734030|ref|ZP_05191744.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Western North America USA6153] gi|254740823|ref|ZP_05198512.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Kruger B] gi|254753666|ref|ZP_05205702.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Vollum] gi|254758763|ref|ZP_05210790.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Australia 94] gi|30255180|gb|AAP25189.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Ames] gi|47501644|gb|AAT30320.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178085|gb|AAT53461.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. Sterne] gi|164711434|gb|EDR16985.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0488] gi|167510874|gb|EDR86266.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0193] gi|167528507|gb|EDR91272.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0442] gi|170126211|gb|EDS95104.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0389] gi|170669257|gb|EDT20000.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0465] gi|172080748|gb|EDT65830.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0174] gi|190559736|gb|EDV13723.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis Tsiankovskii-I] gi|195991227|gb|EDX55196.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus W] gi|196024957|gb|EDX63628.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB108] gi|227004044|gb|ACP13787.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. CDC 684] gi|228814597|gb|EEM60857.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228845832|gb|EEM90858.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265730|gb|ACQ47367.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis str. A0248] Length = 284 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|88800555|ref|ZP_01116117.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] gi|88776700|gb|EAR07913.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] Length = 295 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 154/294 (52%), Gaps = 9/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G GQ+ L +I+ ++DL F P +++N AAY Sbjct: 1 MTVLITGGTGQVGFELQRTLAVFGDIVAPTPEELDLADASAVERFLEQTHPTIVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+EPE+A ++NA+ +A ++ STDYV+DG + E P NP Sbjct: 61 TAVDKAEEEPELAQALNADLPAQLANYCARQSAWLVHYSTDYVYDGAGESFRTEDHPVNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YGK+KLAG+ + + + I RT+WVY G NF+ +MLRL + + E++VV DQ G Sbjct: 121 LSVYGKTKLAGDNAIEASGAQHFIFRTSWVYGARGHNFVKTMLRLGESKSELNVVNDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT+A R I Q+ + + + G++H+ +W FA+ IF +++E G Sbjct: 181 APTTA----RLIAQVTSQALAQRNAANIGLYHLVCRE-TCNWQGFAQAIFQQASELGKAL 235 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S L SKL T +++ TW+ ++ +L + Sbjct: 236 AITPQAVAGIPTSDYPTPAKRPLNSRLIVSKLEETFKLKLPTWQSQLQQVLEEM 289 >gi|315033454|gb|EFT45386.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecalis TX0017] Length = 299 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 157/291 (53%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +E + ++D+ + P VI + AAYT Sbjct: 21 ILITGGNGQLGTELRHLLDEQGIEYVSTDSTELDITDADSTLAKVKEIQPSVIYHCAAYT 80 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 AVDKAEDE E+ +N +G +A+AA ++G +Y+STDY+FDG N Sbjct: 81 AVDKAEDEGKELDEKVNVDGTRHVAEAAKAVGATLVYVSTDYIFDGTKKEGVYAIDDQPN 140 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KL GE+ V ++Y I+RT+WV+ +G NF+ +M +LA+ R +++VV DQF Sbjct: 141 PLNEYGRTKLLGEQAVQEILDDYYIIRTSWVFGQYGHNFVFTMQKLAETRDQLTVVDDQF 200 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + ++ + G++H++ + SW FA+ I ++ Sbjct: 201 GRPTWTRTLAEFMAFVI------AEKAPFGVYHLSNENS-CSWYQFAKEILKDTE----- 248 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + Q+P KA RP YS +D +K +I TW+E + +L N+ Sbjct: 249 -VEVLPVDSTQFPQKAQRPQYSVMDLNK-TEALGFKIPTWQEALAQMLENV 297 >gi|228946125|ref|ZP_04108460.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813538|gb|EEM59824.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 282 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 100/287 (34%), Positives = 154/287 (53%), Gaps = 13/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLMQVLSRTHHELYGVNRTKLDITNKIRVCSYIDRVKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE + +A+ +N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKDKGLAYEVNVLGTKYIAQAAGRIKCKFVYISTDYVFDGEKHTPYNLEDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT N+ I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEHIVTKYTKNHFIIRTSWIFGKGDGHFIAKIGKIASLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT AL +A+ I + +T G++H+T + G SW +FA F + Sbjct: 181 GSPTYALDLAKFIEDLI-------ETDQYGLYHVTNE-GICSWYEFAVEFFKDF----NR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + T+++P A+RP YS L + + WKE ++ Sbjct: 229 DINIIPLTTEEFPQIANRPKYSVLSKDCIMLNGLKPLRHWKEALKEY 275 >gi|228984393|ref|ZP_04144572.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775362|gb|EEM23749.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 284 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHDPVP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER +SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREGVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|330815728|ref|YP_004359433.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] gi|327368121|gb|AEA59477.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] Length = 298 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 149/291 (51%), Gaps = 9/291 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L+ +I + R +DL +P+ P +I+NPAAYTA Sbjct: 8 ILLTGINGQVGYELARSLQGLGRVIALDRQALDLSEPESIRRVVREIEPQLIVNPAAYTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + A +N E A+ A +G ++ STDYV+ G E P P N Sbjct: 68 VDQAETDVAAATRLNVEVPAVFAEEAKRVGAALVHYSTDYVYAGEGERRYVETDPVGPRN 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE + + ++ILRT+WVY + G NFL +MLRL ER E++VV DQ G P Sbjct: 128 VYGRTKLDGERAIVASGCRHLILRTSWVYGMRGRNFLKTMLRLGAERDELNVVADQIGAP 187 Query: 183 TSALQIARAIIQIAHNLI------ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 T + IA I + ++ T+ GI+H+ A G SW FAE IF ES Sbjct: 188 TWSRTIADLTAAILAQSVATGCTSDDWWTNHSGIYHLAA-AGETSWHGFAEAIFAESG-- 244 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G V I YPT A RP+ S L KL + + + W+E +R + Sbjct: 245 GERRPLVRPIPASAYPTPATRPSNSRLSMDKLERSFGLTVPDWREALRLCM 295 >gi|161525768|ref|YP_001580780.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189349510|ref|YP_001945138.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|160343197|gb|ABX16283.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189333532|dbj|BAG42602.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] Length = 300 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 144/292 (49%), Gaps = 10/292 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L ++ + R +DL + PD+I+NPAAYTA Sbjct: 9 ILLTGINGQVGFELQRTLQGLGNVVALDRSRLDLSRLNQVRDVVRDLKPDLIVNPAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +A +NA+ +A+ A IG I+ STDYVF G P E +P N Sbjct: 69 VDQAETDVAMATRLNAQAPAVLAEEAKRIGAALIHYSTDYVFAGTKAGPYVEDDAVDPQN 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE +A+ ++I RT+WVY G NFLL+MLRL ER E+ VV DQ G P Sbjct: 129 VYGRTKLDGERAIAASGCAHLIFRTSWVYGTRGKNFLLTMLRLGAERDELKVVADQIGAP 188 Query: 183 TSALQIARAIIQIA-------HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 T + IA + E + G++H+ A G SW FAE IF S Sbjct: 189 TWSNTIATLTAHVVAQGIAAGAAGREAWWNAHSGVYHLCA-AGSTSWHGFAEAIFRLSDM 247 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P V I YPT A RPA S + KLA +R W + + Sbjct: 248 QKKPS--VKPIPATAYPTPASRPANSRMSNEKLAEHFGLRAPHWVAALELCM 297 >gi|153854429|ref|ZP_01995707.1| hypothetical protein DORLON_01702 [Dorea longicatena DSM 13814] gi|149752955|gb|EDM62886.1| hypothetical protein DORLON_01702 [Dorea longicatena DSM 13814] Length = 313 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 105/318 (33%), Positives = 152/318 (47%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK LV G GQ+ + + + E I + +D+ Sbjct: 1 MKVLVTGVGGQLGHDVMNELASRGYEGIGSDIKETYSGIQDGTAVTTMPYVPMDITDAAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDV+++ AA+TAVD AEDE +I ++NA G IA + +YIS Sbjct: 61 VEKVLTEAAPDVVVHCAAWTAVDLAEDEDKKDIVKAVNATGTKNIADVCKKLDCKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG + PLN+YG+SKLAGE V+ + Y I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTKAWEPDCKDYKPLNVYGESKLAGELAVSETLDKYFIVRIAWVFGKNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML +AK + VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVAKTHDTLKVVNDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGG-----PYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ G V + T++Y +KA RP S LD SKLA Sbjct: 234 YISWYDFTKEIFRQATALGHEEYSEEKVTVLPVTTEEYGVSKAARPFNSRLDKSKLAENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 FTPLPTWQDALGRYLKEI 311 >gi|148360589|ref|YP_001251796.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila str. Corby] gi|296106345|ref|YP_003618045.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila 2300/99 Alcoy] gi|148282362|gb|ABQ56450.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila str. Corby] gi|295648246|gb|ADG24093.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila 2300/99 Alcoy] Length = 294 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 158/292 (54%), Gaps = 5/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + E+ R +D K + L PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLLEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + IP I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCHLVNYCSLKNIPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ+ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA IAR + +I I +S G++H G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHYAGQ-GVTNWHEFANVFLNMAKEKQLL 238 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ + Sbjct: 239 LTLTDLNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVIDH 290 >gi|329902105|ref|ZP_08273032.1| dTDP-4-dehydrorhamnose reductase [Oxalobacteraceae bacterium IMCC9480] gi|327548871|gb|EGF33498.1| dTDP-4-dehydrorhamnose reductase [Oxalobacteraceae bacterium IMCC9480] Length = 296 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 MK L++G GQ+ L E+I V D A + +PD+I+N Sbjct: 1 MKILLLGKGGQVGWELQRSLAPLGELIAVDFDSTDYCGDFTNLSGLADTIRAIAPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +INA +A+ A +G ++ STDYVFDG P S Sbjct: 61 AAAHTAVDKAESEPELARTINALAPAILAQEAQRLGAWLVHYSTDYVFDGSGTAPWTVTS 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT PL++YG++KL GEE + + ++I RT+WVY+ G NF +MLRLAKER ++V+ Sbjct: 121 PTGPLSVYGQTKLEGEEAIGASGCKHLIFRTSWVYAARGGNFARTMLRLAKERDRLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A ++ D S G++H+ A GG SW +A ++ + + Sbjct: 181 DQIGAPTGADLLADVTAHAIRTALQRPDVS--GLYHLVA-GGQTSWHGYASFVVDFARQA 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + T +PT A RP S L+ KL T ++ + W+ GV +L I Sbjct: 238 GVDIKVAQEAILPVATSAFPTPATRPNNSLLNTEKLQQTFSLTLPHWQTGVARLLTEI 295 >gi|34541217|ref|NP_905696.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis W83] gi|188994412|ref|YP_001928664.1| putative dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis ATCC 33277] gi|34397533|gb|AAQ66595.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis W83] gi|47080241|dbj|BAD18850.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis] gi|188594092|dbj|BAG33067.1| putative dTDP-4-dehydrorhamnose reductase [Porphyromonas gingivalis ATCC 33277] Length = 285 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 107/286 (37%), Positives = 152/286 (53%), Gaps = 8/286 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G +GQ+ L + D + ++D+ F +S +IIN AAYT Sbjct: 3 RILVTGADGQLGSELRLLASADSRFVFTDLAELDIRDKDAVLRFMEEYSIGIIINCAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAED+ A +N + A +A AA I+ISTDYVFDG + P E PT PL Sbjct: 63 AVDKAEDDEASAEKVNHQAAAHLAAAAAKYDALLIHISTDYVFDGTANIPYREDIPTAPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KL GE+ V + Y+ILRT+W+YS FG+NF+ +MLRL ER ++VV DQ GT Sbjct: 123 GAYGRTKLKGEQAVLAADCRYMILRTSWLYSSFGNNFVKTMLRLTAERDTLNVVFDQVGT 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A + H L G++H + + G SW DFA I + G Sbjct: 183 PTYAAD----LAAFIHRLAIGQLPVKTGLYHFSNE-GVCSWFDFAVAI---ARMSGHTAC 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + +YPT+ RP YS LD + + NT +I I W++ + L Sbjct: 235 RISPCHSDEYPTRVRRPHYSVLDKTLIKNTFDISIPHWQDSLAACL 280 >gi|209548785|ref|YP_002280702.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534541|gb|ACI54476.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 295 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 149/291 (51%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + ++I VGRP++DL P+ A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGIDISAVGRPEMDLANPESIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGAPVIHISTDYVFSGDKASAYSEEDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGEE VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEEAVAAANPNHVILRTAWVYSPFGTNFLKTMLRLSETRDHLRVVADQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA AI+ IA ++ + SLRG FH+T G SWADFAE IF E ++ GG Sbjct: 181 GCPTSALDIADAILAIAARVVADPAPSLRGTFHLTG-SGEASWADFAEAIFAELSKSGGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V RI T YPT A RPA S L+ KLA T+ +R+ WK+ + ++ ++ Sbjct: 240 NVGVERIPTADYPTPAKRPANSRLNGDKLARTYGLRLPEWKQSMTIVMQDL 290 >gi|229090266|ref|ZP_04221511.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-42] gi|228693046|gb|EEL46762.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-42] Length = 284 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKCAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|49477141|ref|YP_035455.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328697|gb|AAT59343.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 284 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKSAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|9957865|gb|AAG09538.1|AF279625_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 163/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L ++ ++ V + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIVLDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGSWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T YPT A RP S L+ K ++ + W+ GV+ +L + Sbjct: 238 GITLALTELNAVPTSAYPTSASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM 293 >gi|118476794|ref|YP_893945.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis str. Al Hakam] gi|118416019|gb|ABK84438.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis str. Al Hakam] Length = 284 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NIGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|238916052|ref|YP_002929569.1| dTDP-4-dehydrorhamnose reductase [Eubacterium eligens ATCC 27750] gi|238871412|gb|ACR71122.1| dTDP-4-dehydrorhamnose reductase [Eubacterium eligens ATCC 27750] Length = 305 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 107/313 (34%), Positives = 158/313 (50%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC------------VQDVEIIRVGRP-------DIDLLKPKD 41 MK LV G GQ+ + + + + G +D+ Sbjct: 1 MKILVTGVGGQLGHDVMNELIGRGHTGVGSDIAPEYSGVADGSAVTTAEYVPMDITDAAQ 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYIS 99 + SPDV+I+ AA+TAVD AED+ + A +INA+G IA + +YIS Sbjct: 61 VSEVITKVSPDVVIHCAAWTAVDAAEDDDKKAKVKAINADGTQNIANVCKQLDCKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KLAGE V++ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGETPWEPDCKDYKPLNVYGETKLAGELAVSNTLDKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKTHDEVRVVNDQIGTPTYTLDLARLLVDMV-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ ++ G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 YISWYDFTKEIYAQA----GLSTKVTPVTTAEYGISKAARPFNSRLDKSKLTANGFTPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALHRFLKEI 302 >gi|22298494|ref|NP_681741.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus BP-1] gi|22294674|dbj|BAC08503.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Thermosynechococcus elongatus BP-1] Length = 304 Score = 319 bits (819), Expect = 2e-85, Method: Composition-based stats. Identities = 110/294 (37%), Positives = 157/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----DIDLLKPKDFASFFLSFSPDVIIN 56 M+ L++G GQ+ L VE+I V R +DL + + PDV+IN Sbjct: 8 MRLLILGATGQVGWQLVQQAPPRVEVIPVARQGTAVTLDLEDLDAISPLLKTLRPDVVIN 67 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE E E A IN+ G +A +G I+ STDYVF G P E Sbjct: 68 AAAYTAVDQAEQETERAQRINSTAVGLLAATMAELGGLLIHYSTDYVFAGNQSLPYRETD 127 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN YG +K GE+ +A + ++ILRT+WVY + G NFL +M+RLA+ R + VV Sbjct: 128 APAPLNAYGYTKWLGEQAIARHHPAHLILRTSWVYDLRGKNFLRTMVRLAQTRPLVRVVA 187 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT+A IA+ Q+ + + SL G++H+T G SW FA IF + Sbjct: 188 DQIGTPTAAPFIAQVTYQLLEHW--QATPSLSGLYHLT-PRGSTSWYGFAAKIFDHLRAK 244 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + I + +YPT+A RPA+S L+C KL + W+ + +L + Sbjct: 245 GYAAATLEAIPSSEYPTRAKRPAFSTLNCEKLETVLGTPLPPWEAVLEPLLQQL 298 >gi|241763422|ref|ZP_04761476.1| dTDP-4-dehydrorhamnose reductase [Acidovorax delafieldii 2AN] gi|241367364|gb|EER61685.1| dTDP-4-dehydrorhamnose reductase [Acidovorax delafieldii 2AN] Length = 297 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 158/298 (53%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L++G GQ+ L + + D P A + PDVI+N Sbjct: 1 MNILLLGKGGQVGWELQRSLSVLGTVTALDHDSTGHCGDFANPAGLADTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPEFARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGTRPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KL GE+++ ++ILRT+WVY+ G NF +MLRLA+ER ++V+ Sbjct: 121 TPAPLSVYGRTKLEGEQRIQQSGAKHLILRTSWVYAARGGNFAKTMLRLAQERDRLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A +L ++ + G++H A GG +W +A+Y+ ++ + Sbjct: 181 DQWGAPTGADLLADVTAHALRHLQQHPEAG--GLYHCVA-GGETNWHLYAKYVLAQAQQA 237 Query: 237 GG----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V + T +PT A RP S LD ++L +++ W+ GV +L + Sbjct: 238 QPAIKIKATEVAPVPTSAFPTPAQRPHNSRLDTTQLQTIFGLQLPHWQTGVERMLQEV 295 >gi|207728134|ref|YP_002256528.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum MolK2] gi|206591379|emb|CAQ56991.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum MolK2] Length = 305 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT+A IA QI + D + G++H+ A G +W +A + + RG Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-SGETTWHGYATAVLRYAKARGLE 248 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|13476274|ref|NP_107844.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mesorhizobium loti MAFF303099] gi|14027035|dbj|BAB53989.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Mesorhizobium loti MAFF303099] Length = 292 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 129/291 (44%), Positives = 179/291 (61%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G +GQ+ SL V++I +GRP +DL P + PD++++ AA Sbjct: 1 MRLAVTGRDGQVVSSLLEAGQFAGVDVIAIGRPQLDLANPDTVIEAIAAARPDIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AEDEP++AF +NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 YTAVDQAEDEPDLAFRVNAVGAGKVAQAAARLGVPVIHLSTDYVFDGSASGAYVETDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SKLAGE+ VA+ ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ+ Sbjct: 121 PASVYGASKLAGEQTVAAAGPRHLILRTAWVYSPFGKNFVKTMLRLAADRDEISVVADQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G P+SAL IA AI+ A L N D G +H+ G +W+ FA +I S GGP Sbjct: 181 GNPSSALDIADAILHAAATLHRNKDFGAFGTYHLAG-TGETNWSGFARHILDTSRVSGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V+ I T YPTKA RPA S L +K A+ W++ ++ + Sbjct: 240 SARVHDIMTTDYPTKARRPANSRLSSAKFASAFGWTAPDWRQSTEAVVRRV 290 >gi|296331422|ref|ZP_06873894.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676407|ref|YP_003868079.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151537|gb|EFG92414.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414651|gb|ADM39770.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. spizizenii str. W23] Length = 283 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 157/289 (54%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRYSFGHYQPDIVVNTAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+SIN GA A A IG I+ISTDYVFDG P E P +P Sbjct: 63 TSVDKCETELDKAYSINGIGAYYTAMEATRIGAQYIHISTDYVFDGRGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +MLRLA+ ++E+ VV DQ G Sbjct: 123 NTIYGKSKKLGEELIRLATKDSTIIRTSWVYGHGGSNFVQTMLRLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H++ + G SW +FA+ I +S G Sbjct: 183 SPTYTKDLAEAVIKL--------FSHPPGIYHVS-NSGICSWYEFAKAIMEDS----GLA 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TVILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYLQE 277 >gi|225873477|ref|YP_002754936.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium capsulatum ATCC 51196] gi|225792581|gb|ACO32671.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium capsulatum ATCC 51196] Length = 301 Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats. Identities = 110/285 (38%), Positives = 159/285 (55%), Gaps = 5/285 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +++G+ GQ+ L E++ R DL +P P V++ AAYT Sbjct: 5 KAMILGSTGQVGVELQRSFAGYGEVLAYDRSQADLTRPGAIIETIRQQKPSVVLLAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE+A ++NAE G +A+A I + STDYVFDG R P E PL Sbjct: 65 AVDKAESEPELAMAVNAEAPGLLAQACAESDILFVTYSTDYVFDGSKREPWVESDEPRPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKL GE +V ++I RT+WVY G NF L+MLRL KER E+S+V DQ G+ Sbjct: 125 NMYGRSKLEGERRVQQAGGRHLIFRTSWVYGPHGKNFFLTMLRLGKEREELSIVADQTGS 184 Query: 182 PTSALQIA---RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE-SAERG 237 PTS++ IA R ++ L + GI+HMT G +W +FA +IF E + + Sbjct: 185 PTSSIAIAAATRTVVDRMEGLSSAEAAARSGIYHMTC-AGSTNWYEFARHIFSECADQLE 243 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 G ++ + + YPT A RP+YS + L+N ++R+ W++ Sbjct: 244 GRQPRLRPLKAEDYPTPAKRPSYSVMSNEMLSNAWDVRLPAWQDA 288 >gi|291546734|emb|CBL19842.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5] Length = 310 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 150/316 (47%), Gaps = 33/316 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRP------------------DIDLLKPKD 41 M+ V G GQ+ + + + E + +D+ + Sbjct: 1 MRFFVTGVGGQLGHDVMNELSGRGHEGVGSDIAPSYSGIADGTPVTTMPYVQLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYIS 99 A PD +++ AA+TAVD AEDE E +N G IA +GI +YIS Sbjct: 61 VAKTIREVKPDAVVHCAAWTAVDAAEDEENREKVRLVNVVGTQNIADICKELGIKMMYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P N+YG++KL GE V+ + + I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTTPWDPDCKDYAPQNVYGQTKLDGELAVSGTIDKFFIVRIAWVFGKNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +M+ L K +++VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IRTMVNLGKTHDKLTVVSDQIGTPTYTYDLARLLVDMV-------ETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGP---YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNI 274 +SW DF + IF ++A G +V + T +Y +KA RP S LD SKL Sbjct: 234 FISWYDFTKEIFRQAAALGHKEYEKVEVSPVTTAEYGVSKAVRPFNSRLDKSKLVKNGFQ 293 Query: 275 RISTWKEGVRNILVNI 290 + TW++ + L I Sbjct: 294 PLPTWQDALERYLKEI 309 >gi|255321116|ref|ZP_05362282.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter radioresistens SK82] gi|255301670|gb|EET80921.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter radioresistens SK82] Length = 297 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 107/297 (36%), Positives = 160/297 (53%), Gaps = 10/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E++ + R + D+ +P ++ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVVALDRHGLNGLSGDMTQPSAIFDTIVALKPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE E + A +N + AIA A I ++ STDYVFDG T E Sbjct: 61 NASAYTAVDLAETEQDSADLVNHQTVKAIADACLQIKALFVHYSTDYVFDGAGETAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLN+YGK+K GE+ + ++I RT+WVY+ G NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNVYGKTKALGEQAIVESGCQHLIFRTSWVYASKGKNFLKTMLNLAQQREELSII 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PTSA IA ++ +D S G++H+ A G SW +A Y+F ++ Sbjct: 181 DDQIGAPTSAELIADITAHAIPQVV--ADVSKAGVYHLVA-SGETSWFGYASYVFEQARS 237 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV I TK YPT A RP S L+ K+ + + + W++GV+ +V + Sbjct: 238 LGQALIVQKVNPIPTKAYPTPATRPHNSRLNNQKIQHVFKLCLPNWQDGVKRTIVEL 294 >gi|77920187|ref|YP_358002.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380] gi|77546270|gb|ABA89832.1| dTDP-4-dehydrorhamnose reductase [Pelobacter carbinolicus DSM 2380] Length = 314 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 148/296 (50%), Gaps = 9/296 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + ++G G +A+ + + +I+ + P DL +F PDVIIN AAYT Sbjct: 7 RVAIVGARGMLARMVLRSAPSEWDIVALSHPQFDLTDRASARMGLSAFQPDVIINCAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE +AFS+NA G G +A+ A + ++ S+DYVF G P E +P Sbjct: 67 DVDGAESNEALAFSVNAVGPGNLAQVAKELNATLVHFSSDYVFGGDKTAPYRETDCPDPR 126 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYGKSKL GE+ + + I+RT+W+Y G NF+ SM+RLA++R E+ +V DQFG Sbjct: 127 SIYGKSKLQGEQLIQDSGLERFFIVRTSWLYGPGGKNFVESMIRLAQQREELRIVADQFG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL-----RGIFHMTADGGPVSWADFAEYIFWESAE 235 +PT + +A + + ++ GI+H A+ G SW FAE I Sbjct: 187 SPTYTADLTQAALNLLAEETTDTRKKRTPDPLYGIYHY-ANEGQCSWHRFAEEIVSLLKT 245 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + I T YP A RP+YS L +K T + W++ + + N Sbjct: 246 NGETIKAKLILPIPTTAYPLPAPRPSYSVLSKAKYRKTTGAIVPNWRQALARYMAN 301 >gi|118580513|ref|YP_901763.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379] gi|118503223|gb|ABK99705.1| dTDP-4-dehydrorhamnose reductase [Pelobacter propionicus DSM 2379] Length = 280 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 106/286 (37%), Positives = 153/286 (53%), Gaps = 15/286 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LVIG NG + L ++ + V D+D+ + S P V+IN AAYT Sbjct: 2 ILVIGCNGMLGSDLMTLL--EGRGRGVDVRDLDITSLESTERLLTSLKPSVVINCAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E E A +NAEG +A+ IG + ISTDYVFDG +P E T PL+ Sbjct: 60 VDGCESNRETAMLVNAEGVANLARVTRGIGARLVQISTDYVFDGAKGSPYLEDDQTAPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL GE A+ +++I+RT W+Y + G+NF+ +MLRL ER ++VV DQ G+P Sbjct: 120 VYGQSKLLGERN-AATNPDHLIVRTQWLYGLQGNNFVETMLRLGTERECLTVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + ++RAI+ + RG +H A+ G SW +FA IF E+ G + Sbjct: 179 TWTVDLSRAILALLAR-------GCRGTYH-AANAGFCSWNEFARAIFREA----GLGVR 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T+Q A RP YS LDCSKL R+ +W + + + + Sbjct: 227 VEPMTTEQLNRPAKRPLYSTLDCSKLERDTGFRLQSWGDALTDYMK 272 >gi|307340807|gb|ADN43867.1| RmlD [Escherichia coli] Length = 299 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G G++ L +I D P+ A PDVI+N Sbjct: 1 MNILLFGKTGRVGWELQRALAPLGNLIAFDIHSTDYCGDFSNPEGVAETVKRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A +NA +IAKAA+ +G I+ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHYSTDYVFPGNGDTPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E+ V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELEVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T Y T A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAVPTTAYLTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|254468335|ref|ZP_05081741.1| dTDP-4-dehydrorhamnose reductase [beta proteobacterium KB13] gi|207087145|gb|EDZ64428.1| dTDP-4-dehydrorhamnose reductase [beta proteobacterium KB13] Length = 283 Score = 319 bits (818), Expect = 3e-85, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 166/289 (57%), Gaps = 7/289 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ +L + E+I + R D DL + PD+IINPAAY Sbjct: 1 MKILITGINGQVGHALMQELSE-YELIGLTRQDCDLTNLDQIKQVIDNHQPDLIINPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AEDEPE+AF IN + +A+ A IP I+ STDYVFDG E PT+P Sbjct: 60 TKVDQAEDEPELAFKINRDVPKVMAEKARECHIPFIHFSTDYVFDGEKEGSYVEDDPTHP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SK AGEE + I RT+WVYS G+NF L+M +L++++ + +V DQ G Sbjct: 120 LGVYGESKCAGEEAIQEVGGLTYIFRTSWVYSNIGNNFFLTMQKLSQKQGDHKIVADQHG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS+ IA+ + I L D + GI+H+ A+ G SW +FA+ IF ++ G Sbjct: 180 IPTSSQFIAKHLKSIIPQL----DKNSIGIYHLVAN-GKCSWYEFAKQIFTQT-NPGFNL 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K++ I + +Y TK RPA S L K+ NT N++++ W + + ++ Sbjct: 234 EKIHPISSHEYDTKVKRPANSVLSNVKITNTFNLKLNNWDKELEEVINE 282 >gi|308048797|ref|YP_003912363.1| dTDP-4-dehydrorhamnose reductase [Ferrimonas balearica DSM 9799] gi|307630987|gb|ADN75289.1| dTDP-4-dehydrorhamnose reductase [Ferrimonas balearica DSM 9799] Length = 303 Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats. Identities = 116/299 (38%), Positives = 162/299 (54%), Gaps = 10/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A LS + VE++ ++D+ + + F PDV+IN AAY Sbjct: 1 MKVLVTGKGGQLAYELSQTLPEGVELVSFSAQELDITDREAVIARFEEVQPDVVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + ++A+++N GA +A A ++ISTD+VFDG S TP NP Sbjct: 61 TAVDKAESDQKMAYAVNESGAENLALACRQWSAKLVHISTDFVFDGRSTTPYQPEDAPNP 120 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 LN+YG SKLAG+ KV+ N VI+RTAWVYS FG+NF+ +M+RL E+ ++ ++ DQ Sbjct: 121 LNVYGASKLAGDNKVSEVLGQNAVIVRTAWVYSCFGNNFVKTMIRLMAEKEQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI------ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 GTPT A +A+ ++A L E + H T D G SW DFA I + Sbjct: 181 GTPTWAKGLAQLSWRLAEQLASGNLPREEVPEHQALMLHWT-DAGVASWFDFAVAIQELA 239 Query: 234 AERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E+G V I YPT A RPA+S +D S T W+ + N+L + Sbjct: 240 LEKGLLDKSIPVRPIPASAYPTPAKRPAFSVIDKSLTETTTGKCTIHWRAQLSNMLDEL 298 >gi|213585954|ref|ZP_03367780.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 291 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 159/292 (54%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVTLNKPEVA--GLYHLVA-GGTTTWHDYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G + ++ + T YPT A RP S L+ K + + W+ GV+ + Sbjct: 238 GITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFGLILPQWELGVKRM 289 >gi|257481997|ref|ZP_05636038.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331008857|gb|EGH88913.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 302 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGDLCGDLSDLESLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDVVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--ITTAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 298 >gi|321313341|ref|YP_004205628.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BSn5] gi|320019615|gb|ADV94601.1| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis BSn5] Length = 283 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ +N GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + RGI+H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKL--------FSHPRGIYHVS-NSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYLQE 277 >gi|306820758|ref|ZP_07454384.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551207|gb|EFM39172.1| dTDP-4-dehydrorhamnose reductase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 286 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 150/290 (51%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + L + D ++ +D+ + PDVI N AA Sbjct: 1 MKYLITGANGQLGRELQKQLNKSDHDLFLYDVDTMDITDYNQVEKIVSNIRPDVIFNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD E++ E A+ INA GA +A ++ IG ++ STDYVF G P E N Sbjct: 61 HTNVDGCENDIENAYKINAIGAQNLAMISEEIGSKFVHFSTDYVFSGEDEIPRIESDFVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YGKSKL GEE V + + Y I+RTAW+Y G+NF+ +ML+L+K+ +++VV DQF Sbjct: 121 PKTVYGKSKLYGEELVKQFCSKYFIIRTAWLYGD-GNNFVRTMLKLSKQNDKLTVVGDQF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A I+ S+T G++H T G SW DFA IF Sbjct: 180 GSPTYTKD-------LAKVAIDLSNTKYYGLYHGTCQ-GSCSWFDFACKIFEIM----NI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV ++ ++Q+ A RP YS +D L W++ +++ L Sbjct: 228 NIKVEKVTSEQFVRPAKRPTYSVIDNFMLRLRGLDAFRHWEDSLKDYLQE 277 >gi|301052862|ref|YP_003791073.1| dTDP-4-dehydrorhamnose reductase [Bacillus anthracis CI] gi|300375031|gb|ADK03935.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus biovar anthracis str. CI] Length = 284 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDFAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKCAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|206977710|ref|ZP_03238602.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus H3081.97] gi|217958798|ref|YP_002337346.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH187] gi|222094945|ref|YP_002529005.1| dtdp-4-dehydrorhamnose reductase [Bacillus cereus Q1] gi|229138010|ref|ZP_04266608.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST26] gi|206744138|gb|EDZ55553.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus H3081.97] gi|217067250|gb|ACJ81500.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH187] gi|221239003|gb|ACM11713.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus Q1] gi|228645355|gb|EEL01589.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST26] Length = 284 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNIMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VDVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|298485663|ref|ZP_07003742.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159689|gb|EFI00731.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 301 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGELCGDLSDLESLRNTIRSVKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 61 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDVVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 297 >gi|315640671|ref|ZP_07895775.1| dTDP-4-dehydrorhamnose reductase [Enterococcus italicus DSM 15952] gi|315483567|gb|EFU74059.1| dTDP-4-dehydrorhamnose reductase [Enterococcus italicus DSM 15952] Length = 281 Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 158/291 (54%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ + + P VI + AAYT Sbjct: 2 ILLTGGNGQLGTELRHLLDEQGHAYLSTDSHEMDITDAEATMAKIKEIQPKVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 AVDKAEDE E+ +N +G +AKAA+++G +YISTDYVFDG +PTN Sbjct: 62 AVDKAEDEGKELDELVNVKGTENVAKAAEAVGATLVYISTDYVFDGTLKDGEYATDAPTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG++KLAGEE V Y + Y I+RT+WV+ +G NF+ +M +LA+ ++VV DQ+ Sbjct: 122 PLNEYGRTKLAGEEAVQKYMSKYYIIRTSWVFGKYGHNFVFTMQKLAQTHPTLTVVNDQY 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + I GI+H++ D +W +FA+ I ++ Sbjct: 182 GRPTWTRTLAEFMTFATEKKI------PYGIYHLSNDH-ACTWYEFAKEILKDT------ 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + Q+P KAHRP YS +D SK T I TW+E ++ +L ++ Sbjct: 229 DVDVQPVTSDQFPQKAHRPQYSVMDLSKAKAT-GFTIPTWEEALKMMLESV 278 >gi|225863171|ref|YP_002748549.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB102] gi|225785930|gb|ACO26147.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus 03BB102] Length = 284 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++ + INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLTYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L + + +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLPMPSWEEGLERFFIE 280 >gi|310829415|ref|YP_003961772.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] gi|308741149|gb|ADO38809.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] Length = 287 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 110/295 (37%), Positives = 163/295 (55%), Gaps = 20/295 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G+NGQ+ + L + C + +E + P++D+ K S SPD+IIN AA Sbjct: 1 MKILITGSNGQLGRQLITECKKRSIEYVGYDVPELDITNIKLVQSVVEKESPDIIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS------RTPID 113 T VD E ++AF++NA G +A+ + + I +++STDYVFDG + P Sbjct: 61 LTDVDGCERNAKLAFAVNAYGPKNLAEISKNKDILLVHLSTDYVFDGQGVFENGHKRPYV 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E TNP +YGKSK AGE+ V T+ Y I+R+AW+Y G+NF+ +MLRLA+ +++ Sbjct: 121 ESDCTNPKTVYGKSKKAGEDFVVDNTSKYFIIRSAWLYGD-GNNFVKTMLRLAENHPQLT 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPTS + +ARAII++ T+ GI+H T + G SW DFA IF +S Sbjct: 180 VVSDQVGTPTSTVDLARAIIELIQ-------TNAYGIYHGTCE-GQCSWYDFAVAIFQKS 231 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G V + +++Y + RP YS L L + W+E + L Sbjct: 232 ----GVKIDVKPVSSEEYASPTPRPHYSVLRNKGLEDLKINVFRPWEEALSEYLK 282 >gi|324325336|gb|ADY20596.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 284 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF +P Sbjct: 64 TKVDHAEKERDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KE+ EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEKDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNTMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|69244635|ref|ZP_00602899.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|257880165|ref|ZP_05659818.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,230,933] gi|257882966|ref|ZP_05662619.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,502] gi|257891452|ref|ZP_05671105.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,410] gi|258614491|ref|ZP_05712261.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|68196226|gb|EAN10655.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium DO] gi|257814393|gb|EEV43151.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,230,933] gi|257818624|gb|EEV45952.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,502] gi|257827812|gb|EEV54438.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,410] Length = 283 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLQYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKKTEE-LGFVIPTWQEALAQML 275 >gi|260460163|ref|ZP_05808415.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium opportunistum WSM2075] gi|259033808|gb|EEW35067.1| dTDP-4-dehydrorhamnose reductase [Mesorhizobium opportunistum WSM2075] Length = 307 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 136/295 (46%), Positives = 190/295 (64%), Gaps = 7/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G +GQ+A SL DVE++ +GRP++DL +P+ + PD++++ A Sbjct: 1 MRIVVTGRDGQVAASLLEAGQSRADVEVVAIGRPELDLARPETVFDAISAAKPDIVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP+ AF++NA GAG +A+AA +G+P I++STDYVFDG + E T Sbjct: 61 AYTAVDQAEDEPDPAFAVNATGAGKVAEAAARLGVPVIHLSTDYVFDGSAPGAYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SKLAGE+ VA+ ++ILRTAWVYS FG NF+ +MLRLA +R EISVV DQ Sbjct: 121 APLGVYGASKLAGEQAVAAAGPRHLILRTAWVYSPFGRNFVKTMLRLAADRDEISVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AI+ A L N D + G +H+ G +W++FA +I S GG Sbjct: 181 WGNPTSALDIADAILHAAAMLHRNEDLAAFGTYHLAG-TGEANWSEFARHILDTSLAFGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG----VRNILVN 289 +++V I T YPTKA RPA S L +K A+ + W++ VR +LV+ Sbjct: 240 HWARVRDIATMDYPTKARRPANSRLSSAKFASAFGWKAPDWRQSAETVVRRLLVD 294 >gi|325970226|ref|YP_004246417.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] gi|324025464|gb|ADY12223.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta sp. Buddy] Length = 299 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 152/302 (50%), Gaps = 24/302 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 M L+ G +GQ+ L + + I+ V ++D+ +FF Sbjct: 1 MTILITGAHGQLGNELQKILEEATSERGKLPLFYERSRIVAVDVDELDITSSDAVDAFFS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P++ N AA T VD E + A+ +NA G +A A + G ++ISTDYVFDGL Sbjct: 61 VHKPNLAFNCAAMTNVDGCEGNEDAAYLVNAVGPKNLALACERHGARLMHISTDYVFDGL 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E T P YG+SKLAGE+ V + N I RTAW+Y G+NF+ ++LRLA+ Sbjct: 121 GTRPYVETDETAPNTAYGRSKLAGEQFVLASCRNSCICRTAWLYGYIGNNFVKTLLRLAR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E+ ++VV DQ G PTSA+ +A L + + GIFH T +G VSW FA+ Sbjct: 181 EKGSLTVVDDQVGNPTSAVDLA-------WQLALLAASQETGIFHCTCNGEAVSWNAFAK 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I ++ G +V T Q+P A RPAYS L+ L T + WKE + + L Sbjct: 234 RIMEKA----GLAVEVKACTTAQFPRPAKRPAYSALENRHLRKTIGDSMRDWKEALDSFL 289 Query: 288 VN 289 VN Sbjct: 290 VN 291 >gi|113868863|ref|YP_727352.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] gi|113527639|emb|CAJ93984.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] Length = 311 Score = 318 bits (816), Expect = 5e-85, Method: Composition-based stats. Identities = 118/295 (40%), Positives = 156/295 (52%), Gaps = 8/295 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+NGQ+ L I+ + R DL P PD I+N AAYTA Sbjct: 10 ILLTGSNGQVGFELRRSLAPLGRIVALDRSACDLADPAQIRRAIRQSRPDAIVNAAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E ++AF+INA +A+ A +G ++ STDYVFDG E P NPL+ Sbjct: 70 VDKAETEADLAFAINATAVAVMAEEARRLGTLLVHYSTDYVFDGRKDGLYLETDPVNPLS 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YGKSK+AGEE + + +ILRT+WV G NF ++L LA+ERRE+ V DQ G P Sbjct: 130 EYGKSKVAGEESILAAGVASLILRTSWVAGAHGKNFATTILGLARERRELRVAADQHGAP 189 Query: 183 TSALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 TSA IA QI H L N DT GI+H+ A G +W +A + +A G Sbjct: 190 TSASLIADVTAQILARHWLFSNRDTFPAGIYHLAA-SGETTWHAYATEVLRHAASHGVVL 248 Query: 239 --PYSKVYRIFTKQ-YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + Y A RPA S LD +KL T I + +W+EGVR++L I Sbjct: 249 KIRPEDIQGIPAAEYYSAAAPRPANSRLDTTKLRKTFGIHLPSWEEGVRHLLDQI 303 >gi|294620975|ref|ZP_06700174.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium U0317] gi|291599433|gb|EFF30451.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium U0317] Length = 282 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 158/287 (55%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + +++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLQYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKKTEE-LGFVIPTWQEALAQML 275 >gi|297538356|ref|YP_003674125.1| dTDP-4-dehydrorhamnose reductase [Methylotenera sp. 301] gi|297257703|gb|ADI29548.1| dTDP-4-dehydrorhamnose reductase [Methylotenera sp. 301] Length = 301 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 103/297 (34%), Positives = 156/297 (52%), Gaps = 11/297 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINP 57 K L++G NGQ+ L E+I + + D A + +PDVI+N Sbjct: 5 KILLLGKNGQVGWELQRSLAPLGEVIALDAKSLAYCGDFTNLDGLAQAIRTIAPDVIVNA 64 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AA+TAVDKAE EPE+A +INA +A A IG ++ STDYVFDG P E Sbjct: 65 AAHTAVDKAESEPELARTINALAPAVLANEAKRIGAWLVHYSTDYVFDGSGEMPRLETDE 124 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL+IYG +KL GE + + ++I RT+WVY+ G NF +ML+LA+ER + V+ D Sbjct: 125 VSPLSIYGHTKLEGENAIVASGCKHLIFRTSWVYAARGGNFAKTMLKLAQERDSLKVIND 184 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT A +A + + + S G++H+ A G SW +A ++ + + G Sbjct: 185 QIGAPTGADLLADVTAHGIRKALVSPEVS--GLYHLVA-SGETSWHGYASFVIEHARQAG 241 Query: 238 GP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T +PT A RP S L+ +KL N+ ++ + +W+ GV +L I Sbjct: 242 VEIKVAADAIQAVPTSSFPTPAKRPLNSRLNTNKLQNSFDLVLPSWQSGVTRLLAEI 298 >gi|218902417|ref|YP_002450251.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH820] gi|228926358|ref|ZP_04089430.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120843|ref|ZP_04250085.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 95/8201] gi|218538668|gb|ACK91066.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH820] gi|228662503|gb|EEL18101.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 95/8201] gi|228833182|gb|EEM78747.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 284 Score = 318 bits (816), Expect = 6e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK GE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYVGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|330887875|gb|EGH20536.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. mori str. 301020] Length = 302 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHTVSTAYGDLCGDLSDLESLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASQVLAEEARTLDALLVHYSTDYVFDGSGDTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQNGVARMLME 298 >gi|207744131|ref|YP_002260523.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] gi|206595535|emb|CAQ62462.1| dtdp-4-dehydrorhamnose reductase protein [Ralstonia solanacearum IPO1609] Length = 305 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 154/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+NGQ+ L E+I + R DL +P PDVI+NPAAYT Sbjct: 10 RLLVTGSNGQVGFELRRSLAPLGEVIALDRAACDLTQPDALRRLVREHRPDVIVNPAAYT 69 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + AF++N AG +A+ A ++G ++ STDYVFDG E NP Sbjct: 70 AVDKAETDADTAFAVNGTAAGVLAEEARALGSLLVHYSTDYVFDGTKAGAYLETDAVNPQ 129 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ +A+ ++LRT WV G NF +ML+L +ER + V+ DQFG Sbjct: 130 SVYGKSKLAGEQAIAASGAAALVLRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGA 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG- 238 PT+A IA QI + D + G++H+ A G +W +A + + G Sbjct: 190 PTTAALIADVTAQIVARFWLSGDRAAFPGGLYHLAA-SGETTWHGYATAVLRYAKACGLE 248 Query: 239 ---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S + KL T I + W++GV +L I Sbjct: 249 LKVDPERIEAIPATAYPLPAPRPANSRMQTGKLTETFGIHLPDWQQGVHLLLDQI 303 >gi|260220292|emb|CBA27684.1| dTDP-4-dehydrorhamnose reductase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 301 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 163/302 (53%), Gaps = 16/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------IDLLKPKDFASFFLSFSPD 52 MK L++G GQ+ L E++ + D + PD Sbjct: 1 MKILLLGRGGQVGWELQRSLGVLGEVVALDFDANQNPQGLCGDFTDIDGLERTVEAVQPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EPE+A +INA A+A+AA G ++ STDYVFDG P Sbjct: 61 VIVNAAAHTAVDKAESEPELARTINALAPAALARAAIKTGAWLVHYSTDYVFDGSGNAPW 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YG++KL GE+ VA+ ++ILRT+WVY+ G NF +MLRLA ER + Sbjct: 121 KETDATGPLSVYGQTKLEGEQAVAT-CPKHLILRTSWVYATRGGNFAKTMLRLAGERDAL 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +V+ DQFG PTSA +A +L + + G++H A G +W +A+++ + Sbjct: 180 TVINDQFGAPTSAELLADVTAHAIRSLQTRPELA--GLYHCIA-AGETTWHGYAQHVLEQ 236 Query: 233 SAERGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +A G P KV T YPT A RP S LD +KL +++ W++GV+ +L+ Sbjct: 237 AATLGLPLKATAGKVAPTATSNYPTPAKRPLNSRLDTTKLQAAFGLKLPHWQDGVKRMLI 296 Query: 289 NI 290 I Sbjct: 297 EI 298 >gi|229183521|ref|ZP_04310745.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BGSC 6E1] gi|228599931|gb|EEK57527.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BGSC 6E1] Length = 284 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++ + INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLTYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|281354884|ref|ZP_06241378.1| dTDP-4-dehydrorhamnose reductase [Victivallis vadensis ATCC BAA-548] gi|281317764|gb|EFB01784.1| dTDP-4-dehydrorhamnose reductase [Victivallis vadensis ATCC BAA-548] Length = 282 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 145/289 (50%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G G + ++L + E+I GR + D+ F PD +++ AA+ Sbjct: 1 MRILVTGGKGMLGRTLCRAWKK-HEVIAAGRAEADITDAAGFDRLVGELRPDAVVHCAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+ E E E A+ +NA G G +A A + I ISTDYVF G P EF P Sbjct: 60 TAVDRCETESEAAYRVNAAGTGNVAAACRRHEVRLIAISTDYVFGGELDRPCHEFDTPIP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-KERREISVVCDQF 179 +YG+SK AGEE + ++VI RT+W+Y G +F+ +M+ LA R E+ VV DQF Sbjct: 120 GTVYGRSKFAGEELIRQTCPDHVIARTSWLYGAGGPSFVHTMMALADGSRPELKVVADQF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A + + + L G +H+T + G SW +FA IF + G Sbjct: 180 GNPTGADALAGHLAILLEH------PELSGTWHLTCE-GEASWYEFACEIFRLA----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 KV T ++P A RPA S LD L H + W++ + + Sbjct: 229 KQKVTPCATAEFPRPARRPANSRLDKMMLRLHHLPPMPEWRQVLAEFMQ 277 >gi|187927733|ref|YP_001898220.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J] gi|187724623|gb|ACD25788.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12J] Length = 306 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 151/293 (51%), Gaps = 10/293 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + +V G GQ+ L EII V R +DL + + S P +I+N AAYT Sbjct: 8 RIVVTGTTGQVGWELLRSLQGLGEIISVDRSVVDLSRLDAVRALIRSIEPSIIVNAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP+ AF +NA+ G +A+ I+ STDYVFDG P E TNPL Sbjct: 68 AVDKAEQEPDPAFRLNADLPGVLAEECKRTQAAFIHYSTDYVFDGRKDGPYTEADATNPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKLAGE ++ RT+WVY G NFL ++ RLAKER+++ VV DQ G Sbjct: 128 NVYGASKLAGEHNALDANPATLVFRTSWVYGARGKNFLTTIQRLAKERQQLRVVSDQIGA 187 Query: 182 PTSALQIARAIIQIAHNLI--ENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAE 235 PT + IA + + +++ + G++H+T++ G SW FAE I S Sbjct: 188 PTWSRSIADLTAHVIARGLGSTHAEPAWWTVHGGVYHLTSN-GSTSWYGFAEAILQRSGI 246 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G V I +YPT A RP S L +KL + + +W++ + L Sbjct: 247 TG---VAVEPIPAMEYPTPAVRPGNSRLALNKLQSVFGLVPESWEQSLTKCLA 296 >gi|52144115|ref|YP_082713.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus E33L] gi|51977584|gb|AAU19134.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus E33L] Length = 284 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRVQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NTGSCSWFGFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAVAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|75758502|ref|ZP_00738623.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904958|ref|ZP_04069010.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] gi|74494029|gb|EAO57124.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228854700|gb|EEM99306.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] Length = 282 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 151/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ +S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLMQVLSRTHHELYGVNRTTLDITNKIKVSSYLDRLKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE +A+ N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKNKGLAYEANVLGTKYIAEAAGRIKCKFVYISTDYVFDGEKHTPYNLEDRPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT + I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEHFVKKYTKKHFIIRTSWIFGKGDGHFIAKIRKIANLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT AL +A I ++ T G++H+T + G SW +FA F + Sbjct: 181 GSPTYALDLANFIAELIK-------TDQYGLYHVTNE-GICSWHEFAVEFFKDF----NT 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T+++P +RP YS L + + WKE ++ + Sbjct: 229 DINIIPLTTEEFPQAVNRPKYSVLSKDCIILNGLKPLRHWKEALKEYKDQL 279 >gi|329113804|ref|ZP_08242575.1| Putative dTDP-4-dehydrorhamnose reductase [Acetobacter pomorum DM001] gi|326696814|gb|EGE48484.1| Putative dTDP-4-dehydrorhamnose reductase [Acetobacter pomorum DM001] Length = 312 Score = 318 bits (815), Expect = 8e-85, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 154/289 (53%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A SL ++ I VGRPD D +P+ + + P ++N AA+TA Sbjct: 22 VLVTGGKGQLATSLVNL--GGPRIRCVGRPDFDFDRPETLKATLDAIKPVAVVNAAAWTA 79 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE EPE A N G +A+ GIP I++STDYVF G P E P +P Sbjct: 80 VDLAESEPEAAARANTTGPELLARLCAERGIPFIHVSTDYVFAGDKGAPYVETDPVSPQT 139 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE+++ + +ILRT+WVYS G NF+ +ML + + + VV DQ G P Sbjct: 140 VYGSTKAEGEQRILAADPRSIILRTSWVYSAHGKNFVRTMLNVGAKNPALKVVGDQRGNP 199 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T + +A+AI+ I + + GI+H G +W AE ++AE G Sbjct: 200 TCSDDLAQAILSILATIEKTGWKDEYAGIYHACG-TGETTWHGLAEAALQKAAEYGQAKP 258 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ +PT A RPA S +D SKLA+ I++ W+E V ++ I Sbjct: 259 TITAIRTEDWPTPAKRPADSRMDNSKLAHVFGIQMPQWQESVNKVVHQI 307 >gi|229195518|ref|ZP_04322286.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293] gi|228588058|gb|EEK46108.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1293] Length = 284 Score = 317 bits (814), Expect = 8e-85, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISKVQQVVQKIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ + +YISTDYVF G DEF P Sbjct: 64 TKVDQAEKERDLAYRINAIGARNVAVASQLVEAKLVYISTDYVFQGDRPEGYDEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPLSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|325981476|ref|YP_004293878.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas sp. AL212] gi|325530995|gb|ADZ25716.1| dTDP-4-dehydrorhamnose reductase [Nitrosomonas sp. AL212] Length = 303 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 106/298 (35%), Positives = 164/298 (55%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP--DI--DLLKPKDFASFFLSFSPDVIIN 56 M+ L++G NGQ+ L E+I + ++ DL K +P++I+N Sbjct: 1 MRILLLGKNGQLGWELQRSLAPLGELISLDSASRELCGDLSNFKGIKQTIQKTAPNIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE+EPE+ +NAE +A+ A ++ STDYVF+G S P E Sbjct: 61 AAAYTAVDKAENEPELTQILNAEAPKILAQGAKEQNARLVHYSTDYVFNGNSSQPYVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN YGK+KL G+E + + +++I RT+W+Y+ G NF+ ++L LA+ R +++VV Sbjct: 121 TADPLNYYGKTKLEGDENIMTSGCSHLIFRTSWIYATLGRNFIKTILYLAQNRDKLTVVN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PTSA IA + + G+F++TA G SW +FA++I +R Sbjct: 181 DQIGSPTSAELIADITAYTLFTVKYKPK--ISGLFNLTAK-GYTSWYEFAKFILEHVEKR 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + + I + ++P A RP SCL+ +KL NT + + W+ GV IL I Sbjct: 238 NLPLKIHSTHIDPISSVEFPLPAKRPLNSCLNTNKLENTFQLSLPAWQVGVSRILTEI 295 >gi|82701399|ref|YP_410965.1| dTDP-4-dehydrorhamnose reductase [Nitrosospira multiformis ATCC 25196] gi|82409464|gb|ABB73573.1| dTDP-4-dehydrorhamnose reductase [Nitrosospira multiformis ATCC 25196] Length = 300 Score = 317 bits (814), Expect = 9e-85, Method: Composition-based stats. Identities = 106/298 (35%), Positives = 161/298 (54%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+ G +GQ+ L EI+ + + D + A + PDVI+N Sbjct: 1 MKILLFGKDGQVGWELQRSLAPLGEIVALDFGSQEYCGDFTRCDGIADTVRTVVPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EPE INA +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAYTAVDKAESEPERVRIINALAPAILAREAGKLGAWLVHYSTDYVFDGGGSAPRVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PLN+YG +KL GE+ + + N++I RT+WV++ GSNF +MLRLA++R ++V+ Sbjct: 121 PPAPLNMYGITKLEGEQAILTADCNHLIFRTSWVFAARGSNFAKTMLRLAQQRDSLNVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + I ++ G++H+ A G SW +A ++ + +R Sbjct: 181 DQVGAPTGAELLADITAHVIR--ISRQRQNISGLYHLAA-AGETSWYGYANFVLNFARQR 237 Query: 237 GGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V+ I + ++P+ A RP S LD +KL +T ++ + +W+ GV +L I Sbjct: 238 GVKLTAAPENVFPIASNEFPSAARRPKNSRLDTAKLQSTFDLSLPSWETGVARMLTEI 295 >gi|227550498|ref|ZP_03980547.1| possible dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX1330] gi|257897100|ref|ZP_05676753.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com12] gi|293377323|ref|ZP_06623527.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium PC4.1] gi|227180399|gb|EEI61371.1| possible dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX1330] gi|257833665|gb|EEV60086.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com12] gi|292644015|gb|EFF62121.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium PC4.1] Length = 283 Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 99/287 (34%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|257885217|ref|ZP_05664870.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,501] gi|260560528|ref|ZP_05832702.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium C68] gi|261206557|ref|ZP_05921257.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TC 6] gi|289565467|ref|ZP_06445916.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium D344SRF] gi|293553224|ref|ZP_06673861.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1039] gi|293560230|ref|ZP_06676730.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1162] gi|293568260|ref|ZP_06679584.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1071] gi|294614671|ref|ZP_06694573.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1636] gi|294619032|ref|ZP_06698527.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1679] gi|314940007|ref|ZP_07847200.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a04] gi|314941885|ref|ZP_07848749.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133C] gi|314950065|ref|ZP_07853352.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0082] gi|314952412|ref|ZP_07855418.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133A] gi|314993219|ref|ZP_07858599.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133B] gi|314997809|ref|ZP_07862721.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a01] gi|257821069|gb|EEV48203.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,501] gi|260073530|gb|EEW61858.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium C68] gi|260079267|gb|EEW66958.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TC 6] gi|289162796|gb|EFD10647.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium D344SRF] gi|291588972|gb|EFF20796.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1071] gi|291592409|gb|EFF24016.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1636] gi|291594693|gb|EFF26075.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1679] gi|291602634|gb|EFF32849.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1039] gi|291605802|gb|EFF35236.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium E1162] gi|313588181|gb|EFR67026.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a01] gi|313592300|gb|EFR71145.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133B] gi|313595455|gb|EFR74300.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133A] gi|313599310|gb|EFR78155.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133C] gi|313640740|gb|EFS05320.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0133a04] gi|313643600|gb|EFS08180.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium TX0082] Length = 283 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|293602505|ref|ZP_06684951.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC 43553] gi|292819267|gb|EFF78302.1| dTDP-4-dehydrorhamnose reductase [Achromobacter piechaudii ATCC 43553] Length = 298 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/294 (36%), Positives = 160/294 (54%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ Q L + E+I +GR D+DL + PD I+N AAY Sbjct: 1 MKILLLGKDGQVGQELQRTLLPLGEVIALGRHDVDLTDLDALHATLRVHRPDTIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E ++A IN A+A+ ++ I+ STDYVFDG ++ P E P P Sbjct: 61 TAVDKAENEKDLAAQINCRAVSALAQYSNEHNALLIHYSTDYVFDGAAKNPYSETDPVGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG +KLAGE+ + ++ RT+WV+S G NFL ++LRLA+ + ++VV DQFG Sbjct: 121 QSVYGATKLAGEKAIIDSGCKALVFRTSWVFSSHGGNFLKTILRLARTKTSLNVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PTSA IA + + G++H+TA G SW +FA YI E++ RG Sbjct: 181 APTSAELIADVSALAICSYRKKQFAE--GLYHLTA-SGTASWHEFARYIVSEASSRGAAL 237 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + YPT A RP S L+ SKL+ +++ W + + Sbjct: 238 QLTAERINAIPARDYPTPAKRPQNSRLNTSKLSQALQLQLPHWTAHTDRAIDQL 291 >gi|222054967|ref|YP_002537329.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221564256|gb|ACM20228.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 276 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 110/286 (38%), Positives = 151/286 (52%), Gaps = 15/286 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G G + Q L ++ V DID+ + + P V+IN AAYT Sbjct: 2 ILIVGAKGMLGQDLMALFGPGAR--GVDLEDIDITSLESVQKVLFTIRPRVVINAAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E E A +N EG +A A IG + +STDYVFDG +P E PT PL+ Sbjct: 60 VDGCETNQEPAMQVNGEGVAHLALATSEIGAKLVQVSTDYVFDGGKGSPYLEDEPTAPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAGE + ++VI+RT W+Y I G NF+ +MLRLA E+RE++VV DQ G+P Sbjct: 120 VYGESKLAGEMNAR-FNPDHVIVRTQWLYGINGKNFVETMLRLATEKRELAVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A AI + + RGI+H A+ G SW +FA IF ES G Sbjct: 179 TWTVDLALAIKALV-------EKDCRGIYH-AANAGFCSWNEFARAIFAES----GLDVT 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + TK A RP YS LDC KL + W+E +++ L Sbjct: 227 VNPMSTKDLGRPAPRPLYSTLDCGKLTRDTGFQPQPWREALKHYLK 272 >gi|163814427|ref|ZP_02205816.1| hypothetical protein COPEUT_00578 [Coprococcus eutactus ATCC 27759] gi|158450062|gb|EDP27057.1| hypothetical protein COPEUT_00578 [Coprococcus eutactus ATCC 27759] Length = 304 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 147/313 (46%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 M+ V G GQ+ + + + E + + +D+ Sbjct: 1 MRFFVTGVGGQLGHDVMNELLKRGHEGVGSDIQENYSGVADGSAVTKAPYMALDITDKDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PD +I+ AA+TAVD AED+ E +INA G IA + YIS Sbjct: 61 VEKVIAEVNPDAVIHCAAWTAVDMAEDDDKVEKVRAINAGGTQNIADVCKELDCKMTYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P PLN+YG++KL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWQPDCKDYKPLNVYGRTKLEGELAVSQTLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K I VV DQ GTPT +AR ++ + ++T G +H T +GG Sbjct: 181 IKTMLNVGKTHDTIRVVNDQIGTPTYTYDLARLLVDM-------NETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ ++ G ++V + T +Y +KA RP S LD SKL + Sbjct: 234 YISWYDFTKEIYRQA----GYKTEVLPVTTAEYGLSKAARPFNSRLDKSKLVEAGFTPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALSRYLKEI 302 >gi|32451220|emb|CAD55726.1| putative dTDP-dehydrorhamnose reductase [Bacteroides coprosuis] Length = 287 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + G +++ + + + + + D IIN A Sbjct: 1 MNILITGANGQLGSEFRELSPLYSSYNFFFAGCDSLNICEVEAVREYISAHNIDFIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE+ P +N +AK AD I+ STDYVFDG TP E PT Sbjct: 61 AYTAVDAAEENPVDCDKVNHTAVSNLAKVADEYDAGLIHFSTDYVFDGSKNTPYTEEDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + IYG +KLA E + N +++RT+WVYS +G NF+ ++L+ + R + VV DQ Sbjct: 121 SARAIYGITKLASERVALAKCNKAMVIRTSWVYSFYGHNFVKTVLKQLQLRGSMGVVYDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ ++ + S + G++H + + G SW DFA+ + + +G Sbjct: 181 IGTPTYAKDLAKFVLNVL------STDFIPGLYHYSNE-GVCSWFDFAKMVQRFAGLKG- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++Y I + QYP KA RPAYS LD +K+ +T+NI+I W + + + I Sbjct: 233 ---EIYPIHSDQYPAKAPRPAYSVLDKTKVKDTYNIKIPYWVDSLEECIQRI 281 >gi|9957835|gb|AAG09514.1|AF279619_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L +II + D P+ A PDVI+N Sbjct: 1 MNILLFGKNGQVGWELQRSLAPLGKIIALDVHSKDYCGDFSNPEGVAETIRRIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAKAA G ++ STDYVF G TP E Sbjct: 61 AAAHTAVDKAESEVEFATLLNARSVEAIAKAASETGAWVVHYSTDYVFPGTGETPWCEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE+ + ++I RT+WVY+ G+NF +MLR AKER E+SV+ Sbjct: 121 ATAPLNVYGETKLTGEKALQDNCARHLIFRTSWVYAGKGNNFAKTMLRFAKEREEMSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A ++ + + G++H+ A GG +W ++A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRVALKQPEVA--GLYHLVA-GGTTTWYEYAALVFDEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ + T YPT A RP S L+ K ++ + W+ GVR +L + Sbjct: 238 GIELAINKLNAVPTSAYPTPARRPNNSRLNTDKFQKKFDLVLPEWEIGVRRMLAEL 293 >gi|330972803|gb|EGH72869.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 302 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 107/300 (35%), Positives = 161/300 (53%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHSVSTAYGELSGDLSDLDGLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A +NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETERELAHRVNALASEVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPA 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 298 >gi|9957826|gb|AAG09507.1|AF279617_2 dTDP-6-deoxy-L-mannose-dehydrogenase [Salmonella enterica] Length = 299 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVVETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KL GE+ + ++I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ITSPLNVYGKTKLTGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A + + + G++H+ A GG +W D+A +F E+ + Sbjct: 181 DQYGAPTGAELLADCTAHAIRMAFKKPEVA--GLYHLVA-GGTTTWYDYAALVFDEARKA 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T Y T A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GITLALTELKAVPTSAYQTLASRPGNSRLNTEKFQRNFGLILPQWELGVKRMLTEM 293 >gi|291550904|emb|CBL27166.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14] Length = 304 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + E + + +D+ + Sbjct: 1 MKFFVTGVGGQLGHDVMNELLKRGHEGVGSDIQEIYSGVADGSDVTKAPYVSLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 PD +I+ AA+TAVD AEDE E +INA G IA+ + YIS Sbjct: 61 VEKIITEIHPDAVIHCAAWTAVDLAEDEDKQEKVRAINAGGTQNIAEVCKKLDCKMTYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YGK+KL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWEPDCKSYAPLNVYGKTKLEGELAVSETLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K + VV DQ GTPT +AR ++ + +++ G +H T +GG Sbjct: 181 IKTMLNVGKNHDTVRVVNDQIGTPTYTYDLARLLVDM-------NESEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ ++ G ++V + T +Y +KA RP S L+ SKL + Sbjct: 234 YISWYDFTKEIYRQA----GYTTEVLPVTTAEYGLSKAARPFNSRLEKSKLVEAGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALNRYLKEI 302 >gi|255068240|ref|ZP_05320095.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca ATCC 29256] gi|255047510|gb|EET42974.1| dTDP-4-dehydrorhamnose reductase [Neisseria sicca ATCC 29256] Length = 288 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 171/292 (58%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+A+ ++ E+I +D+ + + +F PD I+N AA+ Sbjct: 1 MRTLLTGSKGQLARCFRDRLPENWELIATDSTSLDITDTEAVRNMVQNFQPDAIVNAAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA + I+ISTDYVFDG ++TP E TNP Sbjct: 61 TAVDKAEAHVGTAFAVNATAVHNLASAARACQARFIHISTDYVFDGTNKTPYKEQDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K++GE + + VI+RT+W++S +G+NF+ +M+RLA ER +S+V DQ G Sbjct: 121 QSVYGRTKVSGELLALAANPDSVIIRTSWLFSEYGNNFVKTMIRLAGERDNLSIVHDQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 +PT A +A+AII + + + RGI+H + V+W +FA+ IF + ++ Sbjct: 181 SPTYAGDLAQAIITLLQQPV-----APRGIYHYGGNKS-VTWYEFAQAIFQAAQQQDPDF 234 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T QYP A RPAYS +DC K+ I+ S W++ + I+ + Sbjct: 235 KIPQLNAITTDQYPLPAPRPAYSIMDCQKIEKECGIKASDWQKALNEIIGKL 286 >gi|16519749|ref|NP_443869.1| dTDP-4-dehydrorhamnose reductase RmlD [Sinorhizobium fredii NGR234] gi|2500165|sp|P55463|RMLD_RHISN RecName: Full=Probable dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|2182409|gb|AAB91681.1| dTDP-4-dehydrorhamnose reductase RmlD [Sinorhizobium fredii NGR234] Length = 296 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 137/287 (47%), Positives = 182/287 (63%), Gaps = 1/287 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G NGQIA +L + DVEI+ +GRP+ DL AS +PD+I++ AAY Sbjct: 1 MRLAVTGKNGQIALALKAQARPDVEILTLGRPNFDLACRSTVASSIRDAAPDIIVSLAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP AF++N +G A+A+AA +G+P I++STDYVFDG P E T P Sbjct: 61 TAVDKAESEPYEAFAVNRDGVQALAEAAAGLGVPVIHLSTDYVFDGAKPVPYCEEDRTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SKL GE VAS N+ ILRT+WVYS +G NF+ MLRLA E++VV DQ G Sbjct: 121 ISVYGRSKLEGEFAVASANPNHTILRTSWVYSRYGQNFVKKMLRLADTNDELNVVADQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA I+ A++ IA ++ +S LRGIFH++ G SWA FA+Y+F E G Sbjct: 181 CPTSADDISVAVMTIARRMLSSSSADLRGIFHLSG-SGEASWAAFAKYVFSVYDEITGRQ 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV+ I +YPT A RPA S L C KL T IR+ W+E R ++ Sbjct: 240 IKVHDISAAEYPTPARRPANSRLHCDKLERTFGIRLPNWEESTRRLV 286 >gi|288803655|ref|ZP_06409085.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica D18] gi|302345640|ref|YP_003813993.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica ATCC 25845] gi|288333895|gb|EFC72340.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica D18] gi|302149502|gb|ADK95764.1| dTDP-4-dehydrorhamnose reductase [Prevotella melaninogenica ATCC 25845] Length = 294 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 149/296 (50%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + Q + I + +D+ +D + II Sbjct: 1 MNILVTGANGQLGNEIQLVSKQSKDHYIFTDVCEGYTKLDITNLEDIRKMVQDNKIECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI +NA +AKA +G +++STDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGEIVELLNATAPENLAKAMKEVGGLLVHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + N++ILRTAW+YS FG NF+ +M+ L + ++ V Sbjct: 121 DMKGTPTGVYGLTKLHGEEKIQATGVNHIILRTAWLYSEFGHNFVKTMMNLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N + GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLADAIFDIVENRKYEGN---SGIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + + Sbjct: 234 LAGNTACDIQPCHSDEFPSPVTRPAYSVLDKTKIKETFGIKIPYWVDSLKKCMKGL 289 >gi|218660971|ref|ZP_03516901.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli IE4771] Length = 292 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 147/278 (52%), Positives = 184/278 (66%), Gaps = 2/278 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNATGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEVDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA +I+ IA ++ + SLRG FH+T G SWADFAE IF + GG Sbjct: 181 GCPTSALDIADSILAIATRIVADPAPSLRGTFHLTG-SGEASWADFAEEIFAALLKFGGK 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 V RI T YPT A RPA S L+ KLA T+ I Sbjct: 240 NVGVERIPTTDYPTPAKRPANSRLNGDKLARTYGIPAP 277 >gi|170756261|ref|YP_001782318.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str. Okra] gi|169121473|gb|ACA45309.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum B1 str. Okra] Length = 298 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 25/302 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFLS 48 K L+ G GQ+ + ++ + EII ++D+ F Sbjct: 3 KILITGAKGQLGSQIVNILKASKSELGVIDNIYINTEIIATDSKELDITNLNSAKRFMEK 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P+++IN AAYT VD ED E+AF +N+ GA +A A + I I+ISTDYVF+G Sbjct: 63 CLPNIVINCAAYTNVDSCEDNYELAFKVNSLGARNLAIACEKIKAKLIHISTDYVFEGNG 122 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 + P E+ NP+++YGKSKL GE V + + Y I+RT+W+Y G+NF+ ++++ AK Sbjct: 123 QAPYKEYDLNNPVSVYGKSKLLGERYVKEFCSRYFIVRTSWLYGYSGNNFVKTIIKAAKG 182 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +R++ VV DQ G PT+A +A I+++ T GI+H T G SW DFA Sbjct: 183 KRQLQVVDDQIGNPTNAEDLAYHILKL-------PLTEEYGIYHCTG-SGECSWYDFACK 234 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 I E KV R+ + + KA RP +S LD L T + W++ ++ + Sbjct: 235 IV----EFYNIDCKVDRMKSDKLNRKAKRPYFSSLDNMMLRCTIGDEMRNWQDALKVFIN 290 Query: 289 NI 290 + Sbjct: 291 TL 292 >gi|313683245|ref|YP_004060983.1| dtdp-4-dehydrorhamnose reductase [Sulfuricurvum kujiense DSM 16994] gi|313156105|gb|ADR34783.1| dTDP-4-dehydrorhamnose reductase [Sulfuricurvum kujiense DSM 16994] Length = 289 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 113/294 (38%), Positives = 158/294 (53%), Gaps = 13/294 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ LV G NGQ+ + + E GR +DL +F D IIN Sbjct: 1 MRSILVTGANGQLGSEIKKLSRLYPQYEFTFSGRETLDLGNLCKMEDYFDGKRFDAIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AYTAVDKAE EPE+A +IN +AK A I+ISTDYVFDG + P E P Sbjct: 61 GAYTAVDKAESEPELADTINHRFVSMLAKIAKIKKSALIHISTDYVFDGQNYRPYVETDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+P +YG++K E + + N +I+RT+WVYS FG+NF+ +MLRL KER + V+ Sbjct: 121 TDPQGVYGRTKQKAENAILATAPANTLIIRTSWVYSSFGTNFVKTMLRLGKERDTLGVIY 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ GTPT A +AR ++++ + I+H + + G +SW DF++ IF S Sbjct: 181 DQVGTPTYAEDLARTVLELLPKI----SNESPEIYHYSNE-GAISWYDFSKTIFELS--- 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G V + + QYPT+A RP YS L+ SK+ N I I WK+ + L + Sbjct: 233 -GIVCDVKALTSDQYPTQAKRPHYSLLNKSKIKNDFGITIPYWKDSLCRCLEEL 285 >gi|257899039|ref|ZP_05678692.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com15] gi|257836951|gb|EEV62025.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium Com15] Length = 283 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAE+E E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEEEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKK-TEALGFAIPTWQEALAQML 275 >gi|317492490|ref|ZP_07950918.1| RmlD substrate binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919482|gb|EFV40813.1| RmlD substrate binding domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 299 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 111/297 (37%), Positives = 152/297 (51%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L II V D P+ A+ PDVI+N Sbjct: 1 MNILLFGKNGQVGWELQRSLAPLGNIIAVDHDSSEYCGDFSHPEGVAATVRKIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+ +G I+ STDYV G E Sbjct: 61 AAAHTAVDKAESEQEFAQLLNATSVEAIAKEAEILGAWLIHYSTDYVLPGTGNRAWIETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN+YG +KLAGE + + ++I RT+WVY+ G+NF +MLRL ER E+S++ Sbjct: 121 EPSPLNVYGVTKLAGERAIQNQCKKHLIFRTSWVYASKGNNFAKTMLRLGAEREELSIIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A I N D + GI+H+ A G +W +FA +F E+ R Sbjct: 181 DQYGAPTGAELLADCTAHAIKKAISNHDVA--GIYHLVA-SGTTTWFEFANLVFAEA-RR 236 Query: 237 GGPYSKVY---RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV + T Y T A RP S LD +K ++ + W GV+ +L + Sbjct: 237 AGIELKVNNTLPVPTSSYQTPAKRPLNSRLDTTKFKQVFDLNLPNWDVGVKRMLHEL 293 >gi|257888525|ref|ZP_05668178.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,141,733] gi|257824579|gb|EEV51511.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,141,733] Length = 283 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 99/287 (34%), Positives = 157/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDMDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|291486371|dbj|BAI87446.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus subtilis subsp. natto BEST195] Length = 283 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ +N GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLVNGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+ A+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKFAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKL--------FSHPPGIYHVS-NSGICSWYEFAMAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILPVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYLQE 277 >gi|312136513|ref|YP_004003850.1| dtdp-4-dehydrorhamnose reductase [Methanothermus fervidus DSM 2088] gi|311224232|gb|ADP77088.1| dTDP-4-dehydrorhamnose reductase [Methanothermus fervidus DSM 2088] Length = 280 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 157/290 (54%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G+ G + + L ++ + E+ V D D+ + F+P+V+I+ AA+ Sbjct: 1 MKVLVTGSTGMLGKELINVLKDEYEVKGVSSKDFDIRNLNETIEGIKEFNPEVVIHTAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +E + ++A+ +N+ G +A A + +YISTDYVFDG +P E+ NP Sbjct: 61 TDVDGSEHKKDLAYKVNSIGTRNVAVACNITNSSLLYISTDYVFDGKKGSPYYEYDKPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YGK+K GE V N + I+RT+W+Y +GSNF+ +ML+LA+ + EI VV DQ G Sbjct: 121 INVYGKTKYLGEVYVRDLLNKFYIVRTSWLYGPYGSNFVDTMLQLAENKDEIKVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT L ++ AI ++ GI+H+T + G SW +FA+ IF E Sbjct: 181 SPTYTLDLSLAIKKLIKE-------PRYGIYHLT-NSGHCSWYEFAKQIFKEM----NLD 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I T++ A RP +S L ++ +K+ ++N L I Sbjct: 229 VKLTPIKTEESRRPAKRPKFSVLKNYNWEVEGFKKLRHYKDALKNYLRRI 278 >gi|304314131|ref|YP_003849278.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter marburgensis str. Marburg] gi|302587590|gb|ADL57965.1| predicted dTDP-4-dehydrorhamnose reductase [Methanothermobacter marburgensis str. Marburg] Length = 284 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 151/290 (52%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G +G + L + + E++ G D+D+ + PD II+ AA+ Sbjct: 1 MKVLVTGASGMLGSDLIDVLKERHEVLTSG--DLDIRDLEGVMELAAKKRPDTIIHAAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E E A+ +N G +A AA G +YISTDYVF+G EF +P Sbjct: 59 TDVDCAESERETAYQVNVLGTRNVAAAASQTGASLVYISTDYVFNGKKGEEYFEFDEPDP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YGK+K GE V T+ + I+RT+W++ G NF+ +M+ LA+ EISVV DQ+G Sbjct: 119 LNFYGKTKYLGELAVRDLTDKFYIVRTSWLFGRNGRNFVSTMVELAERGHEISVVDDQYG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A AI ++ G++H+T + G SW DFA IF + + G Sbjct: 179 SPTYTRDLAGAIGKLIER-------PAYGVYHIT-NSGHCSWYDFAREIF-HALQMG--- 226 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ + + ++P A RP++S L + +++E +++ L + Sbjct: 227 VKLKPVRSHEFPRPARRPSFSVLKNYNWIMEGFKPLRSYREALKDYLEEM 276 >gi|170720582|ref|YP_001748270.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169758585|gb|ACA71901.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 301 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 160/300 (53%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R DL + + S +P Sbjct: 1 MKILLLGKNGQVGWELQRALSVLGEVVALDRHRASTPYGELAGDLSDLEGLRATIRSVAP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A + ++ STDYVFDG P Sbjct: 61 QVIVNAAAYTAVDKAESERELAHTVNALASQVMAEEAKRLDAWLVHYSTDYVFDGSGSAP 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E P P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKETDPVAPVNYYGATKLEGEQLIQASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRAT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A + + + + GI+H+ A G +W +A + Sbjct: 181 LNVIADQVGVPTGADLLADVAVAALQQALHKPELA--GIYHL-APAGETTWHAYASDVIA 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + ++G + + I T +YPT A RP S L +KL N+ ++ + W+ GV +L+ Sbjct: 238 FARDQGETLAVEAINPIATTEYPTPAKRPLNSRLSTAKLRNSFSLHLPDWQSGVTRMLME 297 >gi|172059824|ref|YP_001807476.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] gi|171992341|gb|ACB63260.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] Length = 299 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 147/291 (50%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R +DL +F P +I+NPAAYTA Sbjct: 12 ILVTGVNGQVGFELLRSLQGLGRVVPCDRSTLDLSDLDRVRAFVRDLKPSLIVNPAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E + A +NA+ A+ G I+ STDYVFDG E NP+N Sbjct: 72 VDKAESEVDAARRLNADVPRIFAEEMARTGGALIHYSTDYVFDGTKAGAYTETDAPNPVN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KL GE +A+ ++ILRT+WVY G NFLL+ML+L +ER E+ VV DQ G P Sbjct: 132 AYGATKLEGERAIAATGCAHLILRTSWVYGRRGRNFLLTMLKLGRERSELRVVADQVGAP 191 Query: 183 TSALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERGG 238 T A IA A I ++D G++H T+ G SW FAE IF + Sbjct: 192 TWAKTIAAATAHIVAQSTASADADWLKQRAGVYHFTS-AGATSWCGFAEAIFAAALAPHA 250 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P KV I + YPT A RPA S L KL T +R+ W++ + L Sbjct: 251 P--KVVPIASVDYPTPAKRPANSKLALDKLTATFGVRMPDWRDALELCLSE 299 >gi|301311242|ref|ZP_07217170.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] gi|300830816|gb|EFK61458.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 20_3] Length = 303 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 94/303 (31%), Positives = 147/303 (48%), Gaps = 17/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD--------IDLLKPKDFASFFLSFSP 51 M LV G NGQ+ + + + D + +D+ + Sbjct: 1 MNILVTGANGQLGNEIRIITRESDDHYVFTDVNQVEGVETVFLDITDLEAVRVLVAERRI 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRT 110 DVI+N AAYT VD AE +A +NAE +AKA ++ + ISTDYVF Sbjct: 61 DVIVNCAAYTNVDAAESNEALAERLNAEAPENLAKAMKAVNGLLVQISTDYVFGKEPYNV 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E P +YG +KL GE+K+ + +VI+RTAW+YS FG NF +M+ L R Sbjct: 121 PCQEDQQGTPTGVYGMTKLRGEQKIMTVGCKHVIIRTAWLYSEFGKNFCKTMMHLTATRP 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAE 227 ++ VV DQ GTPT A +A+AI + + + ++ GI+H + + G SW DF + Sbjct: 181 QLKVVFDQAGTPTYAYDLAKAIAAVLRDYATDIACAIYGKSGIYHYSNE-GVCSWFDFTK 239 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G + + ++P+ RP+Y LD +K+ T +R+ W E ++ + Sbjct: 240 MI---AEYNGTTACDIRPCHSDEFPSPVKRPSYLVLDKTKIKETFGVRVPYWTESLKRCI 296 Query: 288 VNI 290 N+ Sbjct: 297 TNL 299 >gi|113867832|ref|YP_726321.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] gi|113526608|emb|CAJ92953.1| dTDP-4-dehydrorhamnose reductase [Ralstonia eutropha H16] Length = 305 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 156/293 (53%), Gaps = 7/293 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV G+NGQ+ L ++ + R DL P + + PDVI+NP AYTAV Sbjct: 12 LVTGSNGQVGFELRRSLAPLGRVVALDRTGCDLSCPDEIRRMVREYRPDVIVNPGAYTAV 71 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D+AE EP++AF+IN AG +A+ A ++G ++ STDYVFDG E NPL++ Sbjct: 72 DEAETEPDLAFAINGTAAGILAEEAKALGSLLVHYSTDYVFDGTKNGTYIETDLVNPLSV 131 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YGKSKLAGE+ + + +ILRT W G NF +MLRL +ER + V+ DQFG PT Sbjct: 132 YGKSKLAGEQAITATGAQSLILRTCWAAGAHGGNFAKTMLRLGRERESLRVIADQFGAPT 191 Query: 184 SALQIARAIIQIAHN--LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG---- 237 +A IA QI L + + G++H+ A G +W +A + +A G Sbjct: 192 TATLIADVTAQIVGRRWLCGDRMSFPSGLYHLAA-AGETTWHAYATEVLRYAAAHGIELK 250 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I YP A RPA S LD SKL T +I + W++GV +L I Sbjct: 251 VDPGCIEPIPATAYPLPAPRPANSRLDTSKLRQTFDIHLPDWQQGVHFLLDQI 303 >gi|309780787|ref|ZP_07675528.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA] gi|308920469|gb|EFP66125.1| dTDP-4-dehydrorhamnose reductase [Ralstonia sp. 5_7_47FAA] Length = 305 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 153/294 (52%), Gaps = 7/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+NGQ+ L ++I + R DL +P + PDVI+NPAAYTA Sbjct: 11 LLVTGSNGQVGFELRRSLAPLGDVIALDRATCDLTRPDMLRKVVREYRPDVIVNPAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + + AF++N+ AG +A+ ++G ++ STDYVFDG E P NP + Sbjct: 71 VDKAETDAQTAFAVNSTAAGVLAEETRALGSLLVHYSTDYVFDGTKDGAYVETDPVNPQS 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGEE +A +++RT WV G NF +ML+L +ER + V+ DQFG P Sbjct: 131 VYGKSKLAGEEAIAQSGATALVMRTCWVAGAHGGNFAKTMLKLGRERDSLRVIADQFGAP 190 Query: 183 TSALQIARAIIQIAHN--LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 T+A IA QI L + G++H+ A G +W +A + + G Sbjct: 191 TTAALIADVTAQIVARAWLAGDRAAFPSGVYHLAA-AGETTWHGYATAVLRYAKALGVEL 249 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I YP A RPA S ++ KL T + + W+ G+ +L I Sbjct: 250 KVDPDRIEAIPATAYPLPAPRPANSRMNTGKLVETFGVHLPDWQRGIHLLLDQI 303 >gi|184154575|ref|YP_001842915.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum IFO 3956] gi|183225919|dbj|BAG26435.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum IFO 3956] gi|299782753|gb|ADJ40751.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus fermentum CECT 5716] Length = 285 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 156/290 (53%), Gaps = 16/290 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ L ++ + +V +D+ + S P VI + AAYT Sbjct: 4 ILITGATGQLGSELRNLLDERNVAYDAFDSHGLDITDEETVMSKVEELQPKVIYHCAAYT 63 Query: 62 AVDKAEDEPEIA-FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AVD AED+ + A + +N G IA+AA +G +Y+STDYVFDG++ E PTNP Sbjct: 64 AVDNAEDQFKAANWQVNETGTQNIAQAAKKVGALLVYVSTDYVFDGINPGEYKEDDPTNP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YGK+KLAGEE V +NY I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQFG Sbjct: 124 KNEYGKAKLAGEEIVKQTLDNYYIVRTSWVFGKYGRNFVYTMLRLAKDHDRLTVVNDQFG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I + S G + ++ D SW +FA+ I + Sbjct: 184 RPTWTRTLAEFITHLVDT------KSPYGTYQLSNDDS-CSWYEFAKEILVD------KD 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP KA+RP +S + K T +I TW+E ++ + +I Sbjct: 231 VEVAPVTSEEYPQKAYRPRHSIMSLEKAKAT-GYKIPTWQEALKAFMSDI 279 >gi|328555486|gb|AEB25978.1| dTDP-4-dehydrorhamnose reductase [Bacillus amyloliquefaciens TA208] Length = 282 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L + E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRRLKREGYEVIALTKAMMNISDQQSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA + A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYTSLEAENTGARFIHISTDYVFSGKGTRPYQTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G+NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGNNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I + G +H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVIGLFDR--------PPGTYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V + T++Y K RPAYS L + + + W+E +R+ L Sbjct: 230 AAVLPVTTEEYGNKTPRPAYSVLSLESIERQ-GLGMRHWREALRDYLQR 277 >gi|189424718|ref|YP_001951895.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ] gi|189420977|gb|ACD95375.1| dTDP-4-dehydrorhamnose reductase [Geobacter lovleyi SZ] Length = 277 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 107/285 (37%), Positives = 147/285 (51%), Gaps = 15/285 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G NG + Q L + + V PDID+ + P V+IN AAYT Sbjct: 2 ILVVGANGMLGQDLMGLLGERGR--GVDLPDIDITDMVSVQQVLTALKPKVVINCAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E E A +N EG +A IG + +STDYVFDG +P E PLN Sbjct: 60 VDGCESNTETAMQVNGEGVAFLALVTREIGAKLVQVSTDYVFDGSKGSPYREDDLQQPLN 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG+SKLAGE V + +++RT W+Y + G NF+ +ML+L +E+ ++VV DQ G+P Sbjct: 120 IYGESKLAGELNV-DINPDNLLVRTQWLYGLHGKNFVETMLKLGQEKSVLTVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +AR II + D RG +H A+ G SW FA+ IF E+ G + Sbjct: 179 TWTMDLARGIIALV-------DKDCRGTYH-CANSGHTSWNGFAKAIFDEA----GLPVQ 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T+Q A RP YS LDCSKL W+E ++ L Sbjct: 227 VLPMTTEQLNRPARRPLYSTLDCSKLVADTGFEPQAWREALKQYL 271 >gi|39997461|ref|NP_953412.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA] gi|39984352|gb|AAR35739.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens PCA] gi|298506397|gb|ADI85120.1| dTDP-4-dehydrorhamnose reductase [Geobacter sulfurreducens KN400] Length = 280 Score = 316 bits (810), Expect = 3e-84, Method: Composition-based stats. Identities = 108/287 (37%), Positives = 155/287 (54%), Gaps = 15/287 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G G + + L + D + V +ID+ P+ L+ P V++N AAYT Sbjct: 2 ILVVGAKGMLGRDLMRVLPGD--VRGVDIEEIDITSPESVRRVILTLKPRVVVNCAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD E ++A ++N EG G +A IG + +STDYVFDG+ +P E P NPL+ Sbjct: 60 VDGCETNADLAMAVNGEGVGHLAAVTREIGALLVQMSTDYVFDGVKESPFLEDDPPNPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL GEE+ T +++I+RT W+Y + G NF+ +MLRL+ ER EI+VV DQ G+P Sbjct: 120 VYGRSKLMGEEQARE-TPDHLIVRTQWLYGLGGKNFVETMLRLSTERSEIAVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A AI ++ N + RG +H A+ G SW DFA IF E+ G Sbjct: 179 TWTVDLALAISELIEN-------NCRGTYH-AANRGICSWFDFARAIFAEA----GVEMT 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V T Q A RP YS L C KL + + W+E + L Sbjct: 227 VRPQTTAQLGRPAPRPLYSALCCDKLTRDTGLELEGWREALATYLEK 273 >gi|302186454|ref|ZP_07263127.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae 642] Length = 302 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 107/300 (35%), Positives = 162/300 (54%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVVALDRHSVSTAYGELSGDLSDLNGLRNTIRSVKP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAEAERELANTVNALASQVLAEEARTLDALLVHYSTDYVFDGSGNTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDVVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARAHGEPLAVETINPIGTSEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 298 >gi|188588264|ref|YP_001922377.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] gi|188498545|gb|ACD51681.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E3 str. Alaska E43] Length = 284 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 107/287 (37%), Positives = 155/287 (54%), Gaps = 13/287 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + +++E I R ++D+ + + + P +I+ AAYT Sbjct: 2 ILVTGANGQLGYDVIKELKKRNIECIGTTRKELDITNYNEVSKYIEELKPKCVIHCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKA+DE EI +N G IAK I IYIS+DYVFDG P + NPL Sbjct: 62 AVDKAQDEEEICTKVNVYGTENIAKVCRRINAKMIYISSDYVFDGAGDKPHEIEETPNPL 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK GE KV SY Y I+RT+WV+ + GSNF+ +ML+L KE+ ++VVCDQ G+ Sbjct: 122 SVYGSSKYNGELKVKSYLKKYFIVRTSWVFGLNGSNFVKTMLKLGKEKESLNVVCDQIGS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A+ + +A + GI+H T + G SWA+FAE I + Sbjct: 182 PTYTEDLAKLLCDMAV-------SEKYGIYHAT-NQGFCSWAEFAEEIMRIA----NLNC 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 K+ I T +Y TKA RP S L L ++ + +WK ++ +V Sbjct: 230 KINYISTNEYKTKAIRPLNSRLSKKSLLDSGFNYLPSWKNALKVYIV 276 >gi|54293741|ref|YP_126156.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens] gi|53753573|emb|CAH15028.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Lens] Length = 294 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 157/292 (53%), Gaps = 5/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVSPCTRDILDCFKLERVQDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + IP I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCSFKNIPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ+ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQW 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA IAR + +I I +S G++H G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-ISHSSFDYWGLYHYAGQ-GVTNWHEFANVFLNMAKEKQLL 238 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ + Sbjct: 239 LTLTDLNPIKSEEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVIDH 290 >gi|218280964|ref|ZP_03487554.1| hypothetical protein EUBIFOR_00112 [Eubacterium biforme DSM 3989] gi|218217735|gb|EEC91273.1| hypothetical protein EUBIFOR_00112 [Eubacterium biforme DSM 3989] Length = 304 Score = 315 bits (809), Expect = 3e-84, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 153/313 (48%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + + + +D+ + Sbjct: 1 MKVFVTGVAGQLGHDVMNELASRGYVGVGTDLAESYNGIQDGTYVTTAEYVSLDITNSEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 S PDV+++ AA+TAVD AEDE E +IN G IA A I +YIS Sbjct: 61 VMDTIKSVKPDVVVHCAAWTAVDLAEDEDKQEKVKAINVGGTQNIANACKEIDAKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P PLN+YG++KL GE V++ + Y I+R AWV+ G+NF Sbjct: 121 TDYVFDGQGTEPWQPDCKDYKPLNVYGETKLGGELAVSNTLSKYFIVRIAWVFGKNGNNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K+ + VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLNVGKKFDTLKVVNDQIGTPTYTYDLARLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DFA IF ++ G +KV + TK+Y +KA RP S LD SKL + Sbjct: 234 YISWYDFACEIFKQA----GYTNKVIPVTTKEYGLSKAARPFNSRLDKSKLVENGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ ++ L I Sbjct: 290 TWQDALKRYLQEI 302 >gi|241203188|ref|YP_002974284.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857078|gb|ACS54745.1| dTDP-4-dehydrorhamnose reductase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 297 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 132/290 (45%), Positives = 179/290 (61%), Gaps = 1/290 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+ +L ++ V +EII +GRP++DLL+P + PDV+++ AAY Sbjct: 1 MRIAVTGKSGQVTSALQALNVPGIEIIAIGRPELDLLEPSMVSEIIAKIKPDVVVSSAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF+IN +GA AIA A + +P I++STDYVFDG E P P Sbjct: 61 TAVDKAESDEAAAFAINRDGAKAIAAATAELSLPVIHLSTDYVFDGDKPECYVESDPVGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG+SKL GE VA+ N+VILRTAWVYS FG NF+++MLRLA+ R E+SVV DQ G Sbjct: 121 VSVYGRSKLEGEYAVAAANENHVILRTAWVYSTFGHNFVITMLRLAETREELSVVSDQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA AI++IA L +S LRG+ H+ G S A FA YI E+ G Sbjct: 181 CPTSAGDIAGAIVKIAGRLSNDSTPDLRGVCHLAG-SGETSCAGFARYILSIHEEKTGRR 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L C KL + +++ + W+ R + + Sbjct: 240 VTVKDIATADYPTAAKRPANSRLCCDKLKSLYSVSMPEWRISARAAVTKL 289 >gi|261367243|ref|ZP_05980126.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] gi|282570844|gb|EFB76379.1| dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] Length = 300 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 31/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 MK L+ G GQ+ L ++ +I V ++D+ + S+ Sbjct: 1 MKILITGCRGQLGTELQHQLAEEGCVLGPLPERLRKATVIPVDVDELDITDREATISYIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +IN AA+T V+ E + AF++NA G +A A D + I+ISTDYVF G Sbjct: 61 RHQPDTVINCAAFTNVNGCETSRDAAFTVNAIGPRNLALACDKVNARLIHISTDYVFSGA 120 Query: 108 SRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 +DE + P++ YG++KL GE+ V + ++I+RTAW+YS +G NF+ +M+ L Sbjct: 121 PNGGVALDECALPAPISAYGQTKLLGEQYVERFCRRHIIVRTAWLYSYYGKNFVKTMVNL 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K +I+VV DQ G PT+A+ +A I+++A + GI+H T + G SWADF Sbjct: 181 GKTHEKITVVNDQLGNPTNAVDLAYHILKLAV-------SHDYGIYHCTGN-GICSWADF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A I + G KV + +Y P A+RP +S LD L T + WK+ Sbjct: 233 AAEIMKGA----GLPCKVIPCTSAEYAAAHPESANRPEWSALDNRMLRCTVGDEMRDWKD 288 Query: 282 GVRNILVN 289 +++ N Sbjct: 289 ALKDFFAN 296 >gi|224826610|ref|ZP_03699711.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] gi|224601211|gb|EEG07393.1| dTDP-4-dehydrorhamnose reductase [Lutiella nitroferrum 2002] Length = 297 Score = 315 bits (809), Expect = 4e-84, Method: Composition-based stats. Identities = 111/294 (37%), Positives = 160/294 (54%), Gaps = 6/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG +GQ+ L ++ GR +DL +P A L F+PD+I+N AAY Sbjct: 1 MRILLIGGSGQLGFELRRSLALYGKLWAPGREVLDLSRPDQLAPPVLEFAPDLIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A +NAE +A+ A+ +G ++ STDYVFDG P E T P Sbjct: 61 TAVDRAETEPALAERVNAEAPAELARLAERLGATLLHFSTDYVFDGAGAAPYREGDVTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG++K GE V + + + +LRT+WVY G NF+ ++LRLA +R ++VV DQ G Sbjct: 121 LSVYGRTKRDGELAVMNDCSRHYVLRTSWVYGSVGGNFVKTILRLAAQRDTLNVVHDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PTSA+ IA Q+ L E G++H+TA G SW FA I + + GG Sbjct: 181 APTSAMLIADVSAQLVSRLREGR-VLPYGLYHLTA-AGETSWHGFAREIVGLAQDVGGGL 238 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I YP A RPA S LD KL I + W+ ++ +L + Sbjct: 239 VLKPEAIQAIPAADYPAAAERPANSRLDTHKLRVALGIVLPDWRHHLQLVLQQL 292 >gi|50083369|ref|YP_044879.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Acinetobacter sp. ADP1] gi|49529345|emb|CAG67057.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Acinetobacter sp. ADP1] Length = 302 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 146/301 (48%), Gaps = 13/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 MK L++G NGQ+ L E+I + R + D+ + +F PD+ Sbjct: 1 MKILILGKNGQVGWELQRSLQPLGEVIALDRYEDVEHGFSGDITNFEAIEKVIQTFQPDI 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AYTAVDKAE E E A +N +A+ +I I+ STDYVF+G Sbjct: 61 VLNATAYTAVDKAESEVEQADLVNHIAVKHLAEQCKAIDALLIHYSTDYVFNGQGTAAWQ 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E T P N YGK+K GE + ++ LRT+WVY+ G NF+ +ML+LA+ + E+S Sbjct: 121 EDDTTEPQNAYGKTKRNGEIALEQSQVKFINLRTSWVYASRGHNFIKTMLKLAQSKDELS 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIF 230 ++ DQ G PT A IA QI + G +H+ A G SW +A YIF Sbjct: 181 IIDDQIGAPTGAALIADVTAQIVRYYALQPQLQQKHLLGHYHLAAQ-GETSWYAYANYIF 239 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G V I T YPT A RP S L+ KL + + W++GV +++ Sbjct: 240 DVAKAHGLALQLKTVKPISTVDYPTPAVRPLNSRLNTQKLQQMFALHLPQWQQGVEHMIK 299 Query: 289 N 289 Sbjct: 300 E 300 >gi|254284101|ref|ZP_04959069.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR51-B] gi|219680304|gb|EED36653.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR51-B] Length = 301 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 106/290 (36%), Positives = 151/290 (52%), Gaps = 9/290 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G NGQ+ L D E+I R D+D+ F + +IN +AYTA Sbjct: 7 VLLLGANGQLGSELQFTKPGDTELIACARTDLDIADTDALQRAFTRYRFQSVINASAYTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E E A ++N +G +A + G+ ++ISTD++FDG+ +P NPL Sbjct: 67 VDAAETEREAAHAVNTKGPARLADLCAAHGVRLLHISTDFIFDGMKGSPYRIDDTPNPLG 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KLAGE V + +++RT WVYS GSNF+ +MLRL ER +SVV DQ GTP Sbjct: 127 HYGVTKLAGERAVLGSGADALVVRTGWVYSAQGSNFVRTMLRLMAERDRLSVVEDQVGTP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY-- 240 T A +A + +D G +H + D G SW DFA I E++ G Sbjct: 187 TWARGLANVCWTLL------ADPGAYGCYHWS-DAGACSWYDFAVAIADEASRIGLLDRA 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YPT A RPAYS LD + N W+E +R++L+ + Sbjct: 240 PAIVPIPSSDYPTPARRPAYSVLDKTGTRERLNYPGVHWREALRSMLLEV 289 >gi|304438295|ref|ZP_07398236.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368661|gb|EFM22345.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 304 Score = 315 bits (808), Expect = 4e-84, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 144/291 (49%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + E+ V L + + PD I++ AA Sbjct: 9 MKILITGATGQLGYDCVKEFRARGHEVHGVSSELFPLSDENVMRAVIEATEPDAILHAAA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP INA G +A+ A GI +YISTDYVF G TP + T Sbjct: 69 YTAVDKAEDEPARCRLINAAGTEILARLAAERGIRLLYISTDYVFPGTGTTPYETDDMTG 128 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKL GEE V ++ + Y I+R +WV+ I G NF+ +ML LA+E + +SVV DQ Sbjct: 129 PRNVYGASKLMGEEAVMAHLSQYFIVRISWVFGIHGKNFVKTMLTLAQEHKSLSVVGDQV 188 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + + GI+H T + G SWA FA +F + G Sbjct: 189 GSPTYTHDLASLLADMIA-------SEKYGIYHATNE-GFCSWAQFAAEVFRAA----GK 236 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T YPTKA RP S L L R+ W+ V + + Sbjct: 237 AVSVTSVPTHSYPTKAVRPLNSRLSKKSLDAAGFRRLPPWQNAVARYIEEL 287 >gi|221311746|ref|ZP_03593593.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. 168] gi|221316072|ref|ZP_03597877.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320983|ref|ZP_03602277.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. JH642] gi|221325268|ref|ZP_03606562.1| spore coat polysaccharide synthesis [Bacillus subtilis subsp. subtilis str. SMY] gi|255767795|ref|NP_391661.3| dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis str. 168] gi|254763400|sp|P39631|SPSK_BACSU RecName: Full=Spore coat polysaccharide biosynthesis protein spsK gi|225185423|emb|CAB15808.3| putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 283 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 155/289 (53%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ IN GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLINGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKL--------FSHPPGIYHVS-NSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T++Y K RPAYS L + IR W+E +R L Sbjct: 230 TAILSVTTEEYGNKTPRPAYSVLSHRAIEEA-GIRPRHWREALREYLQE 277 >gi|261416705|ref|YP_003250388.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373161|gb|ACX75906.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326043|gb|ADL25244.1| dTDP-4-dehydrorhamnose reductase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 306 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 107/313 (34%), Positives = 158/313 (50%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDI------------------DLLKPKD 41 MK LV G GQ+ + + + E + + D+ Sbjct: 1 MKVLVTGVGGQLGHDVMNELAKRGYEGVGSDIAPVYSGVADGSAVTTMPYVSMDITNAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 A S +PDVI++ AA+TAVD AEDE + A F+INAEG IA+ A I +YIS Sbjct: 61 VAETIKSVNPDVIVHCAAWTAVDLAEDEDKKAKVFAINAEGTENIARVAKEIDAKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G +P PLN+YG+SKL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFNGRGTSPWKPDCKDYEPLNVYGESKLKGELAVSGTLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ + + VV DQ GTPT L ++R ++ + +T G +H T +GG Sbjct: 181 IKTMLKVGETHDTVRVVYDQIGTPTYTLDLSRLLVDMI-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW +F + I+ ++ G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 FISWYEFTKEIYKQA----GLPTKVLPVTTAEYGLSKAARPFNSRLDKSKLVEAGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALGRYLKEI 302 >gi|160896723|ref|YP_001562305.1| dTDP-4-dehydrorhamnose reductase [Delftia acidovorans SPH-1] gi|160362307|gb|ABX33920.1| dTDP-4-dehydrorhamnose reductase [Delftia acidovorans SPH-1] Length = 300 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 159/302 (52%), Gaps = 15/302 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------IDLLKPKDFASFFLSFSPD 52 MK L++G NGQ+ L E+I + R DL + + A + PD Sbjct: 1 MKLLLLGRNGQVGWELQRSLAPLGELIALDRQGDAGGQGLCGDLSRLDELARTVRALRPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EP+ A +NA +A+ A IG ++ STDYVFDG Sbjct: 61 VIVNAAAHTAVDKAESEPDQARLLNALAPQVLAREAAQIGALLVHYSTDYVFDGSGSAAR 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YG SKL GE+ + + ++I RT+WVY+ G NF +MLRLA+ER + Sbjct: 121 TETEATAPLSVYGSSKLEGEQLIQASGCRHLIFRTSWVYAARGGNFAKTMLRLAQEREAL 180 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 SV+ DQ+G PT A IA L +G++H+ A GG +W +A+++ + Sbjct: 181 SVIDDQWGAPTGADLIADVTAHAIRQL--QRQPGDQGLYHLVA-GGETTWHAYADHVIAK 237 Query: 233 SAERGGPYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + E + ++ + T +PT A RP S L+ +L T +R+ W+ GV +L Sbjct: 238 ARELAPEHPWMVQRIAAVPTSAFPTPAQRPHNSRLNTERLQQTFGLRLPHWQAGVDRMLQ 297 Query: 289 NI 290 I Sbjct: 298 EI 299 >gi|325571036|ref|ZP_08146608.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus ATCC 12755] gi|325156121|gb|EGC68307.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus ATCC 12755] Length = 279 Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats. Identities = 100/290 (34%), Positives = 151/290 (52%), Gaps = 17/290 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + ++D+ P VI + AAYTA Sbjct: 3 LITGGNGQLGSELRHLFDEKGIDYVSTDAKEMDITDETVTMEKVKEIHPSVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 VDKAE+E E+ IN G +A AA +IG +YISTDYVFDG + NP Sbjct: 63 VDKAEEEGKELDELINVNGTRNVALAAKAIGAKLVYISTDYVFDGEKQVGEYQVDDQVNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KL GE V ++Y I+RT+WV+ +G NF+ +M RLAKE + ++VV DQ+G Sbjct: 123 QNEYGRTKLLGERAVQGILDDYYIIRTSWVFGRYGHNFVYTMQRLAKEHKTLTVVNDQYG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + GI+H++ D SW +FA I +S Sbjct: 183 RPTWTRTLAEFMLYVIEK------QAPTGIYHLSNDNS-CSWHEFACEILKDSDVV---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + ++P KA RP YS ++ SK I TW+E +R ++ +I Sbjct: 232 --VKPIPSSEFPQKAKRPQYSVMNLSKAKE-LGFEIPTWQEALRMMVQDI 278 >gi|226943710|ref|YP_002798783.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] gi|226718637|gb|ACO77808.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] Length = 299 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 108/296 (36%), Positives = 158/296 (53%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G NGQ+ L + R DL +P+ A+ P VI+N AAY Sbjct: 1 MKILLLGANGQVGWELQRALAPLGRLEICDRLRADLDRPESLAALVERIQPQVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + +NAE +A AA S ++ STDYVFDG E P P Sbjct: 61 TAVDKAESDAARSRRVNAESVEVLADAARSCDAWLVHYSTDYVFDGCKAAAYTEDDPVGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG++KL GE+ + + ++ILRT+WVY+ GSNF+ +MLRLA ER E+ V+ DQ G Sbjct: 121 LSVYGQTKLEGEQAIQASGCKHLILRTSWVYAARGSNFIKTMLRLAAEREELRVIADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA IA + + L + + + G++H+TA G SW +A ++ ++A Sbjct: 181 APTSAELIADVSALLLYRLRHDRALAEQATGVYHLTA-AGETSWHGYARFVVAKAAALDM 239 Query: 239 P----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T YP A RPA S LD KL T ++ + W+ V +L + Sbjct: 240 SLKAGPDDIHAIGTADYPLPARRPANSRLDTGKLRRTFDLHLPQWEYHVERMLHEL 295 >gi|55821460|ref|YP_139902.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG 18311] gi|55823390|ref|YP_141831.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus CNRZ1066] gi|55737445|gb|AAV61087.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMG 18311] gi|55739375|gb|AAV63016.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYT Sbjct: 9 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDADKVDEVFAEVKPTLVYHCAAYT 68 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G + Sbjct: 69 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNGEKPVGQEWEVDDKP 128 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV DQ Sbjct: 129 DPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 189 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDT---- 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 239 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 287 >gi|291513884|emb|CBK63094.1| dTDP-4-dehydrorhamnose reductase [Alistipes shahii WAL 8301] Length = 286 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 156/291 (53%), Gaps = 8/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ + + + ++D+ +VI+N AA Sbjct: 1 MNILVTGANGQLGREMQRLSAVSPNNYTFTDVAELDVTDAGAVRQAVAQTRAEVIVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V++AE++ E A +N A +A+AA++ G I++STDYVFDG + P E +PT Sbjct: 61 YTNVERAEEDEEAADRLNRGAAENLARAAEANGATLIHVSTDYVFDGTAHLPYTEDAPTA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++KLAGE VA Y+ RTAW+YS +G+NFL +MLRL E+ ++VV DQ Sbjct: 121 PLGVYGRTKLAGERAVAESGCKYLTFRTAWLYSEYGNNFLKTMLRLTAEKERLNVVFDQA 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A I I G++H + + G SW DFA +A G Sbjct: 181 GTPTYAGDLAMTIFSIVEG---GYFAGNEGLYHFSNE-GVASWYDFAA---EIAAAAGHD 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ T ++PTKA RPAYS LD SK+ T + I W+E + L N+ Sbjct: 234 KCRIRPCRTAEFPTKAARPAYSVLDKSKIKETFGLEIPHWRESMLYCLKNM 284 >gi|228912336|ref|ZP_04076031.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|228847319|gb|EEM92278.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] Length = 282 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q+L + + E+ V R +D+ +S+ PDVI++ AA Sbjct: 1 MKILITGVDGQLGQTLIQVLSRTHHELYGVNRTTLDITNKIRVSSYLDRLKPDVIVHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE +A+ +N G IA+AA I +YISTDYVFDG TP + N Sbjct: 61 FTNVDGAEKNKGLAYEVNVLGTKYIAQAAGRIKCKFVYISTDYVFDGEKHTPYNLVDHPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLNIYG++KLAGE V YT + I+RT+W++ +F+ + ++A E+ VV DQF Sbjct: 121 PLNIYGETKLAGEYFVKKYTKKHFIIRTSWIFGKGDGHFIAKIAKIASLYGEVRVVSDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A+ +A I ++ +T G++H T + G SW +FA F + Sbjct: 181 GSPTYAIDLANFIEELV-------ETDQFGLYHATNE-GVCSWYEFAVEFFKDF----NR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + T+++P A+RP YS L + + WKE ++ + Sbjct: 229 DINIIPLTTEEFPQTANRPKYSVLSKDCIMLNGLKPLRHWKEALKEYNKQL 279 >gi|288926473|ref|ZP_06420393.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae D17] gi|288336764|gb|EFC75130.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae D17] Length = 295 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 142/296 (47%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L + I D +D+ + II Sbjct: 1 MNILVTGANGQLGNELQLAAKGSKDHYIFTDVCDNYQKLDITSLEAVRKMVGDNDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +A A +G I++STDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGEIVETLNATAPEHLAVAMKEVGGLLIHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P IYG +KL GE+K+ + ++I+RTAW+YS +G NF+ +M+ L K + ++ V Sbjct: 121 DQKGTPTGIYGLTKLHGEQKIKATEAKHIIIRTAWLYSEYGKNFVKTMMHLTKTKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N GI+H + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLANVIFDIVENRKYEG---HSGIYHFSNE-GVCSWYDFARKI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ + ++P+ RPAYS LD +K+ T I I W + + + + Sbjct: 234 IAGNTDCEILPCHSDEFPSPVKRPAYSVLDKTKIKETFGITIPYWTDSLEKCMKTL 289 >gi|333030052|ref|ZP_08458113.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] gi|332740649|gb|EGJ71131.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] Length = 287 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M L+ G NGQ+ + G +++ + + + + + D IIN A Sbjct: 1 MNILITGANGQLGSEFRELSPLYSSYNFFFAGCDSLNICEVEAVREYISAHNIDFIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAV+ AE+ P +N +AK AD I+ STDYVFDG TP E PT Sbjct: 61 AYTAVNAAEENPVDCDKVNHTAVSNLAKVADEYDAGLIHFSTDYVFDGSKNTPYTEEDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + IYG +KLA E + N +++RT+WVYS +G NF+ ++L+ + R + VV DQ Sbjct: 121 SARAIYGITKLASERVTLAKCNKAMVIRTSWVYSFYGHNFVKTVLKQLQLRGSMGVVYDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+ ++ + S + G++H + + G SW DFA+ + + +G Sbjct: 181 IGTPTYAKDLAKFVLNVL------STDFIPGLYHYSNE-GVCSWFDFAKMVQRFAGLKG- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++Y I + QYP KA RPAYS LD +K+ +T+NI+I W + + + I Sbjct: 233 ---EIYPIHSDQYPAKAPRPAYSVLDKTKVKDTYNIKIPYWVDSLEECIQRI 281 >gi|2500164|sp|Q46769|RMLD_ECOLX RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|799233|gb|AAC63613.1| RmlD [Escherichia coli] Length = 301 Score = 315 bits (807), Expect = 7e-84, Method: Composition-based stats. Identities = 107/298 (35%), Positives = 157/298 (52%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-EF 115 AA+T VDKAE EPE A +NA AIAKAA+ +G I+ STDYVF G P Sbjct: 61 AAAHTDVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQGGT 120 Query: 116 SPTNPLNIYGKSKLAGE-EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T PLN+YG++KL+ E + + + ++I RT+WVY+ G+NF +MLRLAKER E++V Sbjct: 121 DATAPLNVYGETKLSSEKKALQKHCGKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + DQFG PT A +A ++ + + G++H+ A GG +W D+A +F E+ Sbjct: 181 INDQFGRPTGAELLADCTAHAIRVAVDKPEVA--GLYHLVA-GGTTTWHDYAALVFEEAR 237 Query: 235 ERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 KAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 295 >gi|78188493|ref|YP_378831.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3] gi|78170692|gb|ABB27788.1| dTDP-4-dehydrorhamnose reductase [Chlorobium chlorochromatii CaD3] Length = 291 Score = 314 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 158/289 (54%), Gaps = 9/289 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+ GQ+ L ++ V+ P++D+ + + +VIIN A Sbjct: 1 MNILVTGSRGQLGSELQALSVRYPQHSFFFYDLPELDITNSEQINHICNAHHIEVIINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE + E AF +N++GA +A A ++ISTDYVFDG S P E P Sbjct: 61 AYTAVDKAESDAETAFRVNSDGAALLATYAKENHALLLHISTDYVFDGTSSVPYKESDPA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG+SK GEE++ + +++I+RT+W+YS++G+NF+ +MLRL ER E+ VV DQ Sbjct: 121 TPLGVYGRSKWEGEERIRAINPSHLIIRTSWLYSMYGANFIKTMLRLGGERSEVRVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A A++ + ++ + +H + + G SW D A + S Sbjct: 181 VGTPTWAADLAEALLSMLSSIYKG--KHYSATYHYSNE-GVASWYDVASAVMEMS----N 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + YP A RP YS + + L + NI IS W+ + +L Sbjct: 234 LSCKVLPIESHDYPVPAPRPHYSVFNKAALKSDWNISISHWRTSLAAML 282 >gi|52840994|ref|YP_094793.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296784|ref|YP_123153.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Paris] gi|6688598|emb|CAB65207.1| RmlD protein [Legionella pneumophila] gi|52628105|gb|AAU26846.1| dTDP-6-deoxy-L-mannose dehydrogenase RmlD [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750569|emb|CAH11971.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila str. Paris] Length = 294 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 156/292 (53%), Gaps = 5/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + +P I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCTLKNVPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA IAR + +I I +S G++H G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHYAGQ-GVTNWHEFANVFLNMAKEKQLL 238 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I +++YPT+A RP S LD +K+ I+ +WK + +++ + Sbjct: 239 LTLTDLNPIKSQEYPTRATRPKNSVLDTTKIETILGIKSCSWKNDLPDVIDH 290 >gi|322516351|ref|ZP_08069276.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis ATCC 49124] gi|322125084|gb|EFX96477.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis ATCC 49124] Length = 283 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +NY I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ +R Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALREFYKQ 280 >gi|228920042|ref|ZP_04083391.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839498|gb|EEM84790.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 284 Score = 314 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYAFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 VNIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|315608649|ref|ZP_07883630.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae ATCC 33574] gi|315249688|gb|EFU29696.1| dTDP-4-dehydrorhamnose reductase [Prevotella buccae ATCC 33574] Length = 295 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 142/296 (47%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ L + I D +D+ + II Sbjct: 1 MNILVTGANGQLGNELQLAAKGSKDHYIFTDVCDNYQKLDITSLEAVRKMVGDNDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +A A +G I++STDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGEIVETLNATAPEHLAVAMKEVGGLLIHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P IYG +KL GE+K+ + ++I+RTAW+YS +G NF+ +M+ L K + ++ V Sbjct: 121 DLKGTPTGIYGLTKLHGEQKIKATEAKHIIIRTAWLYSEYGKNFVKTMMHLTKTKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N GI+H + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLANVIFDIVENRKYEG---HSGIYHFSNE-GVCSWYDFARKI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ + ++P+ RPAYS LD +K+ T I I W + + + + Sbjct: 234 IAGNTDCEILPCHSDEFPSPVKRPAYSVLDKTKIKETFGITIPYWTDSLEKCMKTL 289 >gi|148556921|ref|YP_001264503.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas wittichii RW1] gi|148502111|gb|ABQ70365.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas wittichii RW1] Length = 296 Score = 314 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 119/289 (41%), Positives = 161/289 (55%), Gaps = 7/289 (2%) Query: 3 CLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G GQ+ L+ D+ I R ++D+ P A++ L D I+N AAYT Sbjct: 5 ILVTGGQGQVGLELARQDWPVDMSIYYPTRDELDIASPDSIAAYLLGRRFDAIVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+E ++AF +N E G +A + GIP +++STDYVFDG E P PL Sbjct: 65 AVDKAEEERDLAFRVNGEAPGLLA----ATGIPLVHVSTDYVFDGSGDGYYREDDPVAPL 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE V + V+LRTAWV S SNFL +MLR+A + VV DQ G Sbjct: 121 GVYGASKLAGERAVLAGGARAVVLRTAWVLSAHRSNFLRTMLRVAATNPTLRVVDDQRGC 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A IA + IA L+E+ + G++H + G SW + A IF SA GGP + Sbjct: 181 PTGAADIAATLRTIALRLVEDP-AAPTGVYHFV-NAGEASWCELAREIFALSAAAGGPSA 238 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RPA S L +K+ + +R W+E VR+I+ + Sbjct: 239 EVEAITTADYPTPAKRPANSRLSTAKIIADYAVRPRDWREAVRDIVGEL 287 >gi|251780332|ref|ZP_04823252.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084647|gb|EES50537.1| dTDP-4-dehydrorhamnose reductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 287 Score = 314 bits (805), Expect = 9e-84, Method: Composition-based stats. Identities = 107/286 (37%), Positives = 153/286 (53%), Gaps = 13/286 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ + +++E I R ++D+ + + + P+ +I+ AAYT Sbjct: 2 ILVTGVNGQLGYDVIKELKKRNIECIGTTRKELDITNYNEVSKYIEELKPECVIHCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAEDE EI +N G IAK I IYIS+DYVFDG P + NPL Sbjct: 62 AVDKAEDEEEICTKVNVYGTENIAKVCRRINAKMIYISSDYVFDGAGDKPHEIDETPNPL 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK GE KV SY Y I+RT+WV+ + GSNF+ +ML+L KE+ ++VVCDQ G+ Sbjct: 122 SVYGSSKYNGELKVKSYLKKYFIVRTSWVFGLNGSNFVKTMLKLGKEKESLNVVCDQIGS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A+ + +A + GI+H T G SWA+FA+ I + Sbjct: 182 PTYTADLAKLLCDMAV-------SEKYGIYHATNH-GFCSWAEFAKEIMKIA----NLNC 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T +Y TKA RP S L L + +S WK ++ + Sbjct: 230 KINYISTNEYKTKAIRPLNSRLSKKSLLDNGFNELSIWKSSLKVYI 275 >gi|291520151|emb|CBK75372.1| dTDP-4-dehydrorhamnose reductase [Butyrivibrio fibrisolvens 16/4] Length = 286 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 111/297 (37%), Positives = 162/297 (54%), Gaps = 23/297 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVII 55 K LV G NGQ+ +++ + +VE I + ++++ + SF + PDVII Sbjct: 3 KILVTGCNGQLGRAIQNEYKDEVEFILTDVVEGEKISPLNIMDLDEVLSFVEAKKPDVII 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA T VD E + + A+ +NA G +A AA +G +++STDYVF G +PI EF Sbjct: 63 NCAAATNVDGCEKDWDFAYKLNALGPRNLAIAASKVGAKLVHVSTDYVFPGNGSSPITEF 122 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P++ YGK+K GE+ V + + + I+RTAW+Y G NF+ +ML LA+ E+SVV Sbjct: 123 DQPAPISAYGKTKYEGEKFVQQFADKWFIVRTAWLYGD-GKNFVKTMLSLAETHDELSVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 CDQ G+PTSA+++AR I + T GIFH T + G +WADF E IF Sbjct: 182 CDQLGSPTSAVELARMIHHL-------EPTENYGIFHGTCE-GDTNWADFTEEIF----R 229 Query: 236 RGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G KV + +++Y P A RP YS LD L T R++ WK+ + L Sbjct: 230 LKGINVKVNHVTSEEYKRMNPASADRPHYSILDNYMLRLTSGYRMADWKDALAEYLK 286 >gi|293611244|ref|ZP_06693542.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826495|gb|EFF84862.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 297 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 108/297 (36%), Positives = 155/297 (52%), Gaps = 10/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L +II + R + D+ + + L+ PDV++ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGDIIALDRHGLNGLSGDMTQLQAIYDTILAVQPDVVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVD AE + E A +N + A A+A ++ STDYVF+G+ T E Sbjct: 61 NASAYTAVDLAETQQEQADIVNHQTVKAAAEACLKTNALLVHYSTDYVFEGMGTTAFVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLNIYGK+K GE+ + Y+I RT+WVY+ NFL +ML LA++R E+S++ Sbjct: 121 DAIAPLNIYGKTKALGEQAIVDSGCRYLIFRTSWVYASRAKNFLKTMLSLAQQREELSII 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PTSA IA + D + GI+H+ A G SW +A Y F ++ Sbjct: 181 DDQIGAPTSAELIADITAHAIPQTV--VDANKVGIYHLVA-SGETSWFGYANYAFAQARI 237 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + KV I T YPT A RP S LD K+ T + + W+EGV+ L + Sbjct: 238 LGQELTIQKVSPIPTSAYPTPATRPHNSRLDNQKIQRTFGLTLPVWQEGVKRALTEL 294 >gi|313206547|ref|YP_004045724.1| dtdp-4-dehydrorhamnose reductase [Riemerella anatipestifer DSM 15868] gi|312445863|gb|ADQ82218.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer DSM 15868] gi|315023457|gb|EFT36465.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer RA-YM] gi|325336005|gb|ADZ12279.1| dTDP-4-dehydrorhamnose reductase [Riemerella anatipestifer RA-GD] Length = 287 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 102/288 (35%), Positives = 145/288 (50%), Gaps = 12/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G GQ+ + + ++D+ F P V IN AA Sbjct: 3 KILVTGAGGQLGNCFKKLEQNYPQYNFVFKTSKELDITDEGAVLDIFNEEKPSVCINAAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE E E A++INA G +AKA I+ISTDYVFDG + P E TN Sbjct: 63 YTAVDLAEQEQEKAYNINANGVENLAKACQENQTLLIHISTDYVFDGDTNLPYSEDDFTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YGKSKL GEE N +++RT+W+YS F NF+ +ML L ++ E+++V DQF Sbjct: 123 PLGVYGKSKLRGEELALENNPNTIVIRTSWLYSEFNKNFVKTMLHLFSQKDELNIVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+A +A A+++I + GI+H + + +W +FA I E Sbjct: 183 GQPTNANDLAEAVMKIIET-----PSKKMGIYHFS-NYSETTWYEFATKI----KEFSKS 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T+ YPT A RP S K+ + I I W+ + + + Sbjct: 233 NIKLNPIPTEAYPTPAKRPHRSTFALDKIEKDYQIEIKYWQPSLESCI 280 >gi|300717502|ref|YP_003742305.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661] gi|299063338|emb|CAX60458.1| dTDP-4-dyhydrorhamnose reductase [Erwinia billingiae Eb661] Length = 295 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L +I + R DL + A+ L+ PDVI+N Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGTLIALDRHSTTYCGDLSNAEGIAATILAIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +N A+A AA+ +G ++ STDYVF+G P E Sbjct: 61 AAAHTAVDKAESEPEVAAVLNTSSVAAMAAAAEEVGALLVHYSTDYVFNGQGEQPWTEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PL++YGK+K GEE +A+ +NY+I RT+WVY+ G+NF +ML+LAK+R E+SV+ Sbjct: 121 VTEPLSVYGKTKRDGEEAIAAACSNYLIFRTSWVYAAKGNNFAKTMLKLAKDREELSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE- 235 DQFG PT A IA + L GI+H+ A G +W D+A ++ E Sbjct: 181 DQFGAPTGADLIADCTAHAIRK--AKGEPQLSGIYHLIA-SGTTTWHDYASFVITTGREK 237 Query: 236 -RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +K+ + T +PT A RPA S LD +K + + + W +GV +L I Sbjct: 238 GLGLKVNKINPVATSAFPTPAKRPANSRLDTAKFQQSFGLTLPDWHDGVERMLTEI 293 >gi|300775247|ref|ZP_07085109.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium gleum ATCC 35910] gi|300505987|gb|EFK37123.1| dTDP-4-dehydrorhamnose reductase [Chryseobacterium gleum ATCC 35910] Length = 287 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 149/289 (51%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K VIG+NGQ+ + + E + +D+ + FF PD IN + Sbjct: 3 KIAVIGSNGQLGNCIKKIAPDFEHQYEFLFTDSSTLDVTSEEQVNDFFYENKPDYCINAS 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AE E E AF++NA+G +A+A I++STDYVFDG + P E T Sbjct: 63 AYTAVDLAEKEKEKAFAVNADGVAHLAQACAEYKSTLIHVSTDYVFDGTTNLPYSEDDFT 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+ +YG+SK GEE +ILRT+W+YS F NF+ +ML L ++ E+ +V DQ Sbjct: 123 NPVGVYGESKRKGEELALEINPKTIILRTSWLYSEFNKNFVKTMLHLFSQKDELGIVADQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT+A +A AI+QI GIFH + + +W +FA+ I AE Sbjct: 183 FGQPTNANDLAEAIMQIIQT-----PQKTYGIFHFS-NYPETTWFEFAKKI----AEFSK 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T QYPT A RP S + K+ T+ I W+ + + Sbjct: 233 SPVKLNAITTDQYPTPAKRPVRSTMSLDKIEETYKIEPKHWENSLEECV 281 >gi|167032393|ref|YP_001667624.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] gi|166858881|gb|ABY97288.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] Length = 301 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 111/298 (37%), Positives = 158/298 (53%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI---DLLKPKDFASFFLSFSPDVIIN 56 MK L++G +GQ+ L +++ + R DL A +F+PDVI+N Sbjct: 1 MKVLLLGRDGQVGWELQRSLAPLGQVLALNARSQAHCGDLANLHGLAETVRAFAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE + E+AF +NAE +A+AA G ++ STDYVF G P E Sbjct: 61 AAAYTAVDKAESDRELAFRVNAEAVDVLARAAADCGALLVHYSTDYVFPGQGTQPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PLN YG SKLAGE+ + + +++ RT WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 AVGPLNTYGASKLAGEQAILAAGCQHLVFRTCWVYAARGNNFAKTMLRLAAERDSLGVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A IA + +L G++H+ A GG +W +A Y+ ++A Sbjct: 181 DQHGAPTGAELIADITAHAIT--ASRRNPALAGLYHLAA-GGETTWCGYARYVLAQAAAH 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + T+ YPT A RPA S LD +KL + + W+ GV +L I Sbjct: 238 GVRLKTHAEQVKPLTTEAYPTPAKRPANSRLDTNKLQKAFALTLPDWRLGVARMLTEI 295 >gi|325854328|ref|ZP_08171527.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola CRIS 18C-A] gi|325484122|gb|EGC87056.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola CRIS 18C-A] Length = 293 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLS---SMCVQDVEIIRV--GRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + V G +D+ +D + + II Sbjct: 1 MNILVTGANGQLGNEIQLVSRHSKDRYIFTDVCEGYAKLDITNLEDIRRMVHENNVECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE I ++NA +A+A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGAIVETLNAIAPENLARAMKEVNGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L R ++ V Sbjct: 121 DMRGTPTGVYGLTKLHGEEKIRATGVKHIILRTAWLYSEFGHNFVKTMMNLTATRPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N + GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAEAIYDIVENRKYEGN---SGIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + ++ Sbjct: 234 LAGNTACDIQPCHSDEFPSPVKRPAYSVLDKTKIKETFGIKIPYWVDSLKKCMKSL 289 >gi|89094079|ref|ZP_01167022.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] gi|89081554|gb|EAR60783.1| dTDP-4-dehydrorhamnose reductase [Oceanospirillum sp. MED92] Length = 293 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 153/293 (52%), Gaps = 6/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ ++++ Q + V R D+D+ S +SP +++N AA Sbjct: 1 MKILLTGADGQLGSAIAAAVLAQGWSLKAVNRQDVDITDRCSVLSNM-EWSPQIVVNAAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED+ + AF++N G + + IP I STDYVF G +P E N Sbjct: 60 YTAVDKAEDDSDAAFAVNELGVQNLVSLCTELNIPIISFSTDYVFSGKQSSPYLESDEPN 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+ +YG SK AGE + + Y+ +RT+WV+ G NF+ +M+RLA+ E+ VV DQ Sbjct: 120 PIGVYGLSKRAGERVLEASGVPYLNIRTSWVFGEEGHNFVKTMIRLAETHDELKVVSDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + I ++ G +H SW +FAE IF ++ G Sbjct: 180 GCPTYTGDLAELVTAIVKKYAA-ENSIPSGHYHYAG-IEKASWYEFAEEIFTQAKAMGLI 237 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV+ + T +YPT+A RP YS + C K+ + S WK G+ +L + Sbjct: 238 ETAPKVFPVPTDEYPTRAERPTYSVMSCRKVKEVFAVPASDWKAGLSKVLKTL 290 >gi|325954730|ref|YP_004238390.1| dTDP-4-dehydrorhamnose reductase [Weeksella virosa DSM 16922] gi|323437348|gb|ADX67812.1| dTDP-4-dehydrorhamnose reductase [Weeksella virosa DSM 16922] Length = 284 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 172/291 (59%), Gaps = 12/291 (4%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+AQ++ + ++ I ++D+ + F + +IN AA Sbjct: 3 KILVTGANGQLAQAIESIEKSTKKIQFIFKTANELDITNRTNLLHHFDKNIYNGVINTAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE E + A+++NA G +A+ IP +++STDYVF G P E P + Sbjct: 63 YTAVDLAESEEKKAYAVNALGVENLARVTKRQNIPLLHLSTDYVFSGNDNHPQKEDDPCD 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P NIYGK+KLAGE+ +I+RTAW+YS FG+NF+ +MLRL ++++EI+V+ DQ Sbjct: 123 PQNIYGKTKLAGEQLALQTNPKTIIIRTAWLYSRFGNNFVKTMLRLFEQKKEINVINDQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A+ +A+A++QI SD G+FH + + G SW DFA+ I + Sbjct: 183 GSPTNAIDLAKALVQIIE-----SDVPQYGVFHYSNE-GECSWYDFAQAI----KKYTNS 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I TK YPT A RPA+S LD +K+ + ++I W++ +R+ + + Sbjct: 233 SIEIHPIATKDYPTAAKRPAFSLLDKTKIKQVYGLKIPKWEDSLRSEINEM 283 >gi|312863690|ref|ZP_07723928.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis F0396] gi|311101226|gb|EFQ59431.1| dTDP-4-dehydrorhamnose reductase [Streptococcus vestibularis F0396] Length = 283 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAAKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +NY I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKD------YGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|225025806|ref|ZP_03714998.1| hypothetical protein EUBHAL_00031 [Eubacterium hallii DSM 3353] gi|224956890|gb|EEG38099.1| hypothetical protein EUBHAL_00031 [Eubacterium hallii DSM 3353] Length = 313 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 154/318 (48%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E I +D+ + Sbjct: 1 MKFFVTGVNGQLGHDVMNELSSRSYEGIGSDIAPKYSGIQDDSPVTKMPYISLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PD++++ AA+TAVD AED + E INA G IA A + IY+S Sbjct: 61 VTRILKETAPDIVVHCAAWTAVDLAEDADKQETVRKINAAGTQYIASACKELDCKMIYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP PLN+YG++KL GE+ VA+ Y I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTTPWKPDCKDYKPLNVYGQTKLLGEQAVANTLEKYFIVRIAWVFGQNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K +++VV DQ GTPT +AR ++ +A ++ G +H T +GG Sbjct: 181 IKTMLTVGKNHDKLTVVNDQIGTPTYTFDLARLLVDMA-------ESEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGP-----YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++ G + V+ + T +Y +KA RP S LD SKL Sbjct: 234 YISWYDFTKEIFRQAVALGHTEYDENHVTVFPVTTAEYGMSKAARPFNSRLDKSKLVEAG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + WK+ ++ L + Sbjct: 294 FTPLPDWKDALQRYLKEV 311 >gi|154687906|ref|YP_001423067.1| SpsK [Bacillus amyloliquefaciens FZB42] gi|154353757|gb|ABS75836.1| SpsK [Bacillus amyloliquefaciens FZB42] Length = 282 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L + E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRQLKQEGYEVIALTKAMMNISDQRSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA A A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYAALEAENTGAKFIHISTDYVFSGKGTRPYQTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGHNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I + G++H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVIGLFDR--------PPGLYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V + T++Y + RPAYS L + + + W+E + + L Sbjct: 230 AAVLPVTTEEYGNETPRPAYSVLSLESIERQ-GLGMRHWREALHDYLQR 277 >gi|257867755|ref|ZP_05647408.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC30] gi|257874082|ref|ZP_05653735.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC10] gi|257801838|gb|EEV30741.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC30] gi|257808246|gb|EEV37068.1| dTDP-4-dehydrorhamnose reductase [Enterococcus casseliflavus EC10] Length = 286 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 158/295 (53%), Gaps = 19/295 (6%) Query: 1 MK--CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ L+ G NGQ+ L + + + + ++D+ K +F P VI + Sbjct: 1 MRNMILLTGGNGQLGTELRHLLDEKGLNYVSTDAQEMDITDEKATLAFIQELKPTVIYHC 60 Query: 58 AAYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEF 115 AAYTAVDKAEDE E+ IN G +AKAA ++G +YISTDYVFDG E Sbjct: 61 AAYTAVDKAEDEGKELDEKINVNGTENVAKAAKAVGAKFVYISTDYVFDGTKKEGVYKET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP N YG++KL GE+ V + Y I+RT+WV+ +G NF+ +M RLA+ ++VV Sbjct: 121 DTPNPQNEYGRTKLLGEQAVKDLLDEYFIIRTSWVFGKYGHNFVYTMKRLAQTHPRLTVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ+G PT +A ++ I N + GI+H++ D SW +FA+ I E+ Sbjct: 181 DDQYGRPTWTRTLAEFMVYIIEN------NADYGIYHLSNDNS-CSWYEFAKEILKET-- 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA RP YS LD +K NT I TW+E + ++ ++ Sbjct: 232 ----DVEVAPVTSAEYPQKAKRPQYSVLDLTKAKNT-GFVIPTWEEALADMTASL 281 >gi|298387538|ref|ZP_06997090.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] gi|298259745|gb|EFI02617.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] Length = 259 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 102/269 (37%), Positives = 153/269 (56%), Gaps = 12/269 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G NGQ+ + + ++ ++D+ ++ ++I+N A Sbjct: 1 MRILVTGANGQLGNEMQVLAKENPQHTYYFTDVQELDICNKDAVWAYIAEKRIELIVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ E+A+ +N+E +A AA G I +STDYVFDG + P E Sbjct: 61 AYTAVDKAEDDSELAYKLNSEAPKTLACAAQFNGAAIIQVSTDYVFDGTAHIPYTEECDP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KL GE +V ++ V++RTAW+YS FG+NF+ +M+RL KER + V+ DQ Sbjct: 121 CPNSVYGTTKLEGEYEVLNHCEKSVVIRTAWLYSTFGNNFVKTMIRLGKERDSLGVIFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A+AI I + I + G++H + + G SW DF I + G Sbjct: 181 VGTPTYANDLAQAIFAIINKGI------VPGVYHFSNE-GVCSWYDFTVAIHRLA---GI 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 KV + T +YPT+A+RPAYS LD +K Sbjct: 231 TSCKVKPLHTAEYPTRANRPAYSVLDKTK 259 >gi|229171965|ref|ZP_04299530.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus MM3] gi|228611308|gb|EEK68565.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus MM3] Length = 284 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRMQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF +P Sbjct: 64 TKVDHAEKEQDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INVYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERAELSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF ++ Sbjct: 184 SPTYVADLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSDA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|206900293|ref|YP_002250033.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] gi|206739396|gb|ACI18454.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] Length = 292 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 154/287 (53%), Gaps = 11/287 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G GQ+ + EI ++D+L PDV+IN +AY Sbjct: 5 MKIVILGGKGQLGTEIYEYLKDKEEIYSFSHQELDILNYDLLEKKLQEIKPDVVINCSAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE+E + +N GA ++ A +G +Y STDY+FDG TP EF NP Sbjct: 65 TKVDKAEEEKDECIKVNTIGAKYVSFLAYKVGAKIVYFSTDYIFDGEKSTPYTEFDDPNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKL GE+ + N++ILR +W+Y I+G NF+ ++L LA+ER+++++V DQ G Sbjct: 125 LSVYGLSKLYGEKLTIEHNPNHLILRISWLYGIYGRNFVKTILNLARERKKLTIVNDQKG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT L +A+ + ++ GI+H +++ G +W DFA+ I + Sbjct: 185 SPTYTLDVAKQVYELIKK-------DKVGIYH-SSNQGETTWYDFAKRIIEILKIK---D 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T++YP+ A RP YS LD L + W+ + + L Sbjct: 234 VEVLPIKTEEYPSIAKRPKYSVLDNFLLKLEGINIMRDWEIALEDFL 280 >gi|311070292|ref|YP_003975215.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus atrophaeus 1942] gi|310870809|gb|ADP34284.1| putative dTDP-4-dehydrorhamnose reductase [Bacillus atrophaeus 1942] Length = 282 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 150/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGRELCRQLKQAGYEVIALTKSMMNIADHRSVRHSFRHYRPDIVVNTAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E E A+ IN GA A A+ IG +ISTDYVF+G +P E P Sbjct: 63 TSVDKCETELEKAYLINGIGAYYTALEAEGIGAAYFHISTDYVFNGKGTSPYKEDDTPEP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + I+RT+WVY G NF+ +ML+LA+ + E+ VV DQ G Sbjct: 123 STIYGKSKKLGEELIRLAGKGSTIIRTSWVYGSGGHNFVNTMLQLAETKDELRVVNDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I + + G++H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVITLFGH--------PPGMYHVS-NSGMCSWYEFAAAIMEES----GLD 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + TK+Y RPAYS L + IR W++ +R+ L Sbjct: 230 TTILPVSTKEYGNLTPRPAYSVLSHQAINER-GIRPRHWRDALRDYLQE 277 >gi|229056956|ref|ZP_04196351.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603] gi|228720345|gb|EEL71919.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH603] Length = 284 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ IG +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLIGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHKMLQLNGFLQMPTWEEGLERFFIE 280 >gi|292670068|ref|ZP_06603494.1| dTDP-4-dehydrorhamnose reductase [Selenomonas noxia ATCC 43541] gi|292648256|gb|EFF66228.1| dTDP-4-dehydrorhamnose reductase [Selenomonas noxia ATCC 43541] Length = 284 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + C + E+ V L +F+PD I++ AA Sbjct: 1 MKILITGATGQLGRDCVQACKARGHEVYGVSSRMFPLSDETAMRGVLDTFAPDAILHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AEDEP + +NA G +A+ A +YISTDYVF G P + + T Sbjct: 61 YTAVDQAEDEPALCRLVNAAGTEILARLAQERNTKFLYISTDYVFPGTGTEPYETDAATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SK GEE V ++ + Y I+R +WV+ +G NF+ +ML L++ + +S+V DQ Sbjct: 121 PRNVYGASKRMGEEAVQAHLDRYFIVRISWVFGAYGRNFVKTMLALSETHKSLSIVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + ++ GI+H T + G SWA+FA IF + G Sbjct: 181 GSPTYTHDLAPLLADML-------ESEKYGIYHATNE-GFCSWAEFAAEIFRAA----GR 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + YPTKA RP S L + L R+ W++ V L + Sbjct: 229 SVNVTSVPSHAYPTKAVRPKNSRLSKASLDAAGFRRLPAWQDAVARCLEEL 279 >gi|327313602|ref|YP_004329039.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola F0289] gi|326946109|gb|AEA21994.1| dTDP-4-dehydrorhamnose reductase [Prevotella denticola F0289] Length = 293 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLS---SMCVQDVEIIRV--GRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + V G +D+ +D + + II Sbjct: 1 MNILVTGANGQLGNEIQLVSRHSRDRYIFTDVCDGYAKLDITNLEDIRRMVHENNVECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE I ++NA +A+A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGAIVETLNAVAPENLARAMKEVNGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L R ++ V Sbjct: 121 DMRGTPTGVYGLTKLHGEEKIRATDVKHIILRTAWLYSEFGHNFVKTMMNLTATRPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I N + GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAEAIYDIVENRKYEGN---SGIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + ++ Sbjct: 234 LAGNTACDIQPCHSDEFPSPVKRPAYSVLDKTKIKETFGIKIPYWVDSLKKCMKSL 289 >gi|330988616|gb|EGH86719.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 301 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 108/300 (36%), Positives = 163/300 (54%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + DL + + P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVVGEVIALDRHTVSTAYGDLSGDLSNLEGLRNSIRRIQP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 61 QVIVNAAAYTAVDKAETERELAHTVNALASQVMAEEAQTLDALLVHYSTDYVFDGSGNTA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDAVSPVNYYGATKLEGEQLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 297 >gi|229028991|ref|ZP_04185090.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1271] gi|228732271|gb|EEL83154.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1271] Length = 284 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISRMQQVVQEIRPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYGEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKEREEVSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVTDLNVMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSNA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|308187470|ref|YP_003931601.1| dTDP-4-dehydrorhamnose reductase [Pantoea vagans C9-1] gi|308057980|gb|ADO10152.1| dTDP-4-dehydrorhamnose reductase [Pantoea vagans C9-1] Length = 295 Score = 314 bits (804), Expect = 1e-83, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 153/295 (51%), Gaps = 9/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L +I V R D + A P VI+N Sbjct: 1 MNILLFGKNGQVGWELQRALAPLGNLIVVDRHSSEYCGDFENSEGIAETVRRIKPAVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVDKAE E + A +NA ++A+AA+ IG I+ STDYVFDG P E Sbjct: 61 ATAYTAVDKAESEQDKARLVNATSIKSLAEAAEEIGAWLIHYSTDYVFDGSGDRPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GEE + S + ++I RT+WVY+ G+NF +ML+LAK+R +SV+ Sbjct: 121 ATAPLNVYGQTKLEGEEAIVSTMSRFLIFRTSWVYAAKGNNFAKTMLKLAKDRDTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A IA + +D+S+ G++H+ A G +W +A + + + Sbjct: 181 DQFGAPTGAELIADCTAHAIR--VALNDSSVAGLYHLIA-AGETTWHAYASKVIAFAKAQ 237 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + T +PT A RPA S L+ K + + W GV +L+ Sbjct: 238 GVELQVQTINAVPTSAFPTPAKRPANSRLNTEKFQQAFGLNLPDWTVGVERMLLE 292 >gi|229010612|ref|ZP_04167813.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides DSM 2048] gi|229166162|ref|ZP_04293922.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH621] gi|228617260|gb|EEK74325.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH621] gi|228750656|gb|EEM00481.1| DTDP-4-dehydrorhamnose reductase [Bacillus mycoides DSM 2048] Length = 284 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMMINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS + L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHNMLRLNGFLQMPTWEEGLERFFIE 280 >gi|229160278|ref|ZP_04288277.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus R309803] gi|228623239|gb|EEK80066.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus R309803] Length = 284 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L + +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEVYDIYPFDKKLLDVTNISRIQQVVQEIHPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAIASQLVGAKLVYISTDYVFQGDRPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M++L KER EI VV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIIRTSWLYGKYGNNFVKTMIQLGKEREEIPVVSDQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNVIINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHT----NSK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KV + T+++ + A RP YS + L +++ +W+EG+ + Sbjct: 232 VKVLPVSTEEFGSAAARPKYSVFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|118595026|ref|ZP_01552373.1| dTDP-4-dehydrorhamnose reductase [Methylophilales bacterium HTCC2181] gi|118440804|gb|EAV47431.1| dTDP-4-dehydrorhamnose reductase [Methylophilales bacterium HTCC2181] Length = 299 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 118/286 (41%), Positives = 158/286 (55%), Gaps = 7/286 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ +L D E++ + R D DL +P PD+IINP AY Sbjct: 1 MKILITGINGQVGHALMQQL-NDHELVGLTRKDCDLTEPDQIRKAIDHHQPDLIINPGAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AEDEP++AF IN + +A+ A IP I+ STDYVFDG + E PTNP Sbjct: 60 TKVDQAEDEPKLAFLINRDAPKVMAEKAREYDIPFIHFSTDYVFDGEKKGAYKEDDPTNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGEE + + + I RT+WVYS G NF L+M RL+++ EI VV DQFG Sbjct: 120 LGVYGASKWAGEEAIQNVGGKFYIFRTSWVYSDRGHNFYLTMKRLSEKPDEIRVVSDQFG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS IA+ I L ++ GI+H+ D G SW +FA I ++ Sbjct: 180 VPTSNFFIAKHTQNIMKQL----NSKNTGIYHLVPD-GQSSWCEFARQIITKTTPTFNLK 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T QYPT+A RP S LD SK+ I+ TW +++ Sbjct: 235 -NLLPINTDQYPTRAKRPRSSVLDNSKIKAVFMIKFDTWTMELKDY 279 >gi|259414812|ref|ZP_05738735.1| dTDP-4-dehydrorhamnose reductase [Silicibacter sp. TrichCH4B] gi|259349263|gb|EEW61010.1| dTDP-4-dehydrorhamnose reductase [Silicibacter sp. TrichCH4B] Length = 290 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 126/290 (43%), Positives = 160/290 (55%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L+S +I VGR DL P A+ SP +IN AAY Sbjct: 10 MSILVFGATGQVARELASYEG----VISVGRARADLSDPGACATLIREISPQAVINAAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+ A GIP ++ISTDYVF G P P Sbjct: 66 TAVDKAESEEELATIINGAAPGAMVAACVQAGIPFVHISTDYVFAGSGTAAWQTDDPVAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + YVILRT+WV S G+NF+ +MLRL ER +++V DQ G Sbjct: 126 PNAYGRSKRAGEEAVIAAGGTYVILRTSWVVSAHGNNFVKTMLRLGAERDRLTIVGDQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IARA +++A L ++ + GI+H+ VSWA FA IF +S G Sbjct: 186 APTPARDIARACVEMAGQL--RAEPAKSGIYHLQG-APYVSWAGFAAEIFAQS----GLA 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP S LDC+ L I W+ G+R+IL + Sbjct: 239 CEVADIPTSDYPTPAVRPLNSRLDCTTLETVFGIPQPDWRSGLRDILKEL 288 >gi|319946710|ref|ZP_08020944.1| dTDP-4-dehydrorhamnose reductase [Streptococcus australis ATCC 700641] gi|319746758|gb|EFV99017.1| dTDP-4-dehydrorhamnose reductase [Streptococcus australis ATCC 700641] Length = 283 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P +I + AAYT Sbjct: 2 ILITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAQVKPTLIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKASEKHGATLVYISTDYVFDGNKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMRNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D G +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEGDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I +WK+ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPSWKDALKEFYKQ 280 >gi|85543849|gb|ABC71787.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens] Length = 296 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 107/297 (36%), Positives = 154/297 (51%), Gaps = 11/297 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L + + R + DL + + PD+I+ Sbjct: 1 MKILLLGKNGQVGWELQRSLGDRGDG-CLDRHPLEGLSGDLSELDALRATIRKVGPDIIV 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE E E+A +N E + +A+ A S+ I+ STDYVF G TP E Sbjct: 60 NAAAYTAVDKAESETELADRVNGEASRVMAQEAASLDAWLIHYSTDYVFSGEGSTPWQES 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P+N YG SKLAGE+ +A+ ++I RT+WVY G+NF +MLRLAK+R + V+ Sbjct: 120 DAVAPVNHYGASKLAGEQAIAASGCKHLIFRTSWVYGARGNNFAKTMLRLAKDRESLGVI 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA ++ +L GI+H+ A G VSW +A + + Sbjct: 180 ADQVGAPTGADLIADVTALAIQQVVHR--PALSGIYHLAA-AGEVSWHGYASLVISFAKA 236 Query: 236 RG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + I T YPT A RP S L+ KL + ++ + W+ GV +L + Sbjct: 237 HGEELAVTAINPIDTTAYPTPARRPLNSRLNTQKLCDNFSLHLPDWQSGVTRMLREV 293 >gi|327482468|gb|AEA85778.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 336 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 157/296 (53%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G NGQ+ L ++ R DL +P + PDVI+N AAY Sbjct: 8 MSILLLGANGQVGWELQRALAPLGNLLACDRRRADLTRPDQLERLVEAQQPDVIVNAAAY 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A INAE G +A+AA G ++ STDY+FDG + E T P Sbjct: 68 TAVDRAESEPQQAHLINAEAVGVLAQAAQRCGALLVHYSTDYIFDGNAIGMQAEDRQTAP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +KL GE + + +++ILRT WVY+ G NF ++LRLA ER E+ +V DQ G Sbjct: 128 LNVYGCTKLEGERLIRASGCHHLILRTCWVYASRGHNFAKTILRLASEREELRIVADQIG 187 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTSA IA + + + + G +H+ A GG SW ++A YI +AE G Sbjct: 188 APTSAELIADITAIMLLRMANDPGLAQRAYGTYHLAA-GGHTSWHEYACYIVRTAAELGM 246 Query: 239 ----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S++ + + ++ T A RP S LD S+L T + + W R +L + Sbjct: 247 QFRTDPSRILAVKSGEFVTAAARPRNSLLDTSRLQETFGLTLPHWTTHARRMLQEV 302 >gi|317503438|ref|ZP_07961477.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606] gi|315665449|gb|EFV05077.1| dTDP-4-dehydrorhamnose reductase [Prevotella salivae DSM 15606] Length = 290 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + I D +D+ II Sbjct: 1 MNILVTGANGQLGNEIQKVSKHSQDHYIFTDVCDGYEKLDITNLDAIRQMVAQLDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I +NA+ +A A + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAETAGDIVEQLNAKAPENLAMAMKEVEGLLVHISTDYVFGGDPYNTPCRE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 +P +YG++KL GE+++ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGSPTGVYGQTKLHGEQRILATGVKHIIIRTAWLYSEFGKNFVKTMLSLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N +++ GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVIYDIIENRKFDNNE---GIYHFSNE-GVCSWYDFTKVI---AQ 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD SK+ +T I I W + +R + + Sbjct: 234 MAGHTTCDIQPCHSDEFPSPVKRPAYSVLDKSKIKDTFGITIPYWTDSLRKCIAAL 289 >gi|312278797|gb|ADQ63454.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus thermophilus ND03] Length = 283 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAVEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|241761595|ref|ZP_04759682.1| dTDP-4-dehydrorhamnose reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373903|gb|EER63436.1| dTDP-4-dehydrorhamnose reductase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 297 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 115/288 (39%), Positives = 161/288 (55%), Gaps = 3/288 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LVIG NGQ+A SLS + + + I GRP +D P +IIN AA+TA Sbjct: 9 ILVIGRNGQLATSLSKLGKESITCI--GRPILDFNYLDSILEIIKRHKPRIIINTAAWTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + + A IN GA +A ++I IP I+ISTDYV+DG +P E P P Sbjct: 67 VDLAEKQKKAAMQINYLGAKELAHVCNNIQIPLIHISTDYVYDGKKGSPYIETDPIKPQT 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SK AGE V S N +ILRT+WVYS G NF+ ++ +K++ + VV DQ+G P Sbjct: 127 VYGRSKAAGELAVLSENPNSIILRTSWVYSSCGENFVCKIINASKKQSSLKVVADQYGNP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T++ +A AII I + S +GI++++ G SW +FA+ I ES G K Sbjct: 187 TNSDDLANAIIHIIPQIFYKSPKKCQGIYNVSG-TGSASWYEFAKIILEESKNYGLLLPK 245 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + IFT +PT A RP SCLDC K + IR+ W+ ++ + I Sbjct: 246 LTPIFTSDWPTLAKRPKNSCLDCKKFKDIFGIRLPYWRSSIKKTISEI 293 >gi|330961717|gb|EGH61977.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 302 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 158/300 (52%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-------DI--DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R D+ DL S P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGEVIALDRQTTSTAYGDLTGDLSDLDGLRKTIRSVQP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E +A ++NA + +A+ A ++ ++ STDYVFDG Sbjct: 62 QVIVNAAAYTAVDKAETERALAHTVNALASQVLAEEARTLDALLVHYSTDYVFDGTGSVA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + +N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSAVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ G PTSA +A + + L GI+H+ A G VSW +A+Y+ Sbjct: 182 LSVIADQIGAPTSAELLADIATAALQQTLARPE--LCGIYHL-APAGEVSWHAYAQYVID 238 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 FARANGEPLAVETINPIGTTEYPTPARRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 298 >gi|51246074|ref|YP_065958.1| dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54] gi|50877111|emb|CAG36951.1| probable dTDP-4-rhamnose reductase [Desulfotalea psychrophila LSv54] Length = 298 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 164/292 (56%), Gaps = 6/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ GQ+ + L VE++ R ++D+ K F PD+IIN Y Sbjct: 1 MRILVTGSGGQVGKCLCRQLSGKVELLTTNRSELDITCQKAVLKTVTGFQPDIIINATGY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 TAVD AE+ E A+ +N +GA + +AA ++G ++ISTDYVF G E Sbjct: 61 TAVDLAEENSEEAYRVNQDGAKFLGQAATAVGAALLHISTDYVFSGEKSRDESYSEGEEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YGKSKLAGE+ VA+ ++ILRT+WV+S +G NF+ +M+ L ++ +S+V DQ Sbjct: 121 GPLGVYGKSKLAGEKAVANTCKRHIILRTSWVFSEYGRNFVKTMIALGQKHDSLSIVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PT A IA A+I IA I + + G++H ++W+ FA+ IF E+ Sbjct: 181 YGGPTYAGDIASALITIAEK-ISDENFCQWGLYHFAGQ-PFMNWSGFAKVIFSEAERENL 238 Query: 239 PYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ + + ++QYP+ A RP S LD SKL I S W++ +R I+ Sbjct: 239 LPAEPVINNVSSEQYPSLAKRPGNSQLDTSKLTAQFGISPSDWQQALREIIK 290 >gi|289662629|ref|ZP_06484210.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668427|ref|ZP_06489502.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 302 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 154/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L D + R D P+ ++ Sbjct: 1 MTTLVLGANGQVGTELLRALAVDGPVQATTRSGQLPDGSTCETADFNAPETLSALLDRVR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD AE + E A NA G IA S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDGAEQDRESAVRANATAPGVIAAWCASNRVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAHTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL + I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPAKRPAYSRLSIDKLQSDFGIELPEWRIGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|228476990|ref|ZP_04061628.1| dTDP-4-dehydrorhamnose reductase [Streptococcus salivarius SK126] gi|228251009|gb|EEK10180.1| dTDP-4-dehydrorhamnose reductase [Streptococcus salivarius SK126] Length = 283 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAAKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + NY I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVTNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|116628183|ref|YP_820802.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus thermophilus LMD-9] gi|116101460|gb|ABJ66606.1| dTDP-4-dehydrorhamnose reductase [Streptococcus thermophilus LMD-9] Length = 283 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVF+G + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFNGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + NY I+RT+WV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVTNYYIIRTSWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG-GPVSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAVEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|322373392|ref|ZP_08047928.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C150] gi|321278434|gb|EFX55503.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C150] Length = 295 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 14 ILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFSEVKPSLVYHCAAYT 73 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + Sbjct: 74 AVDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDKP 133 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 134 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 193 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 194 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAAEDTTWYDFAVEILKDT---- 243 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 244 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 292 >gi|253578778|ref|ZP_04856049.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849721|gb|EES77680.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 304 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 99/313 (31%), Positives = 149/313 (47%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + E + + +D+ Sbjct: 1 MKFFVTGVGGQLGHDVMNELLKRGHEGVGSDIQENYSGVADDSAVTKAPYIALDITDKDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PD +I+ AA+TAVD AED+ ++A +INA G IA + YIS Sbjct: 61 AEKVITEVNPDAVIHCAAWTAVDMAEDDDKVAKVRAINAGGTQNIADVCKKLNCKMTYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P PLN+YG++KL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWQPDCKDYKPLNVYGQTKLEGELAVSQTLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K + VV DQ GTPT +AR ++ + ++T G +H T +GG Sbjct: 181 IKTMLNVGKTHDTVRVVNDQIGTPTYTYDLARLLVDM-------NETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ ++ G + V + T++Y +KA RP S LD SKL + Sbjct: 234 YISWYDFTKEIYHQA----GYKTAVLPVSTEEYGLSKAARPFNSRLDKSKLVEAGFTPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALSRYLKEI 302 >gi|149195144|ref|ZP_01872235.1| dTDP-4-dehydrorhamnose reductase [Caminibacter mediatlanticus TB-2] gi|149134696|gb|EDM23181.1| dTDP-4-dehydrorhamnose reductase [Caminibacter mediatlanticus TB-2] Length = 307 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 21/305 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 L+ G+NGQ+ L + + + + + D+D+ + F +IIN Sbjct: 5 NILITGSNGQLGSELRMLNDKFKMLNYRCFFIDKNDLDITDFQRVKDFIEKNDIKIIINT 64 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAE+E E+A IN + +AK + I ++ISTDYVF+G + P E Sbjct: 65 AAYTAVDKAEEEKELAELINYKAVENLAKISKEKDIFLVHISTDYVFNGKNYRPYVEEDK 124 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T+P+N YG +KL GEE + VI+RT+WVYS FG NF+ +ML LAK ++E++++ D Sbjct: 125 TDPINYYGLTKLKGEEAIKKINPKGVIIRTSWVYSSFGKNFVKTMLNLAKTKKELNIIFD 184 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSD------------TSLRGIFHMTADGGPVSWADF 225 Q GTPT A +A I++I + +D S I+H + + G SW DF Sbjct: 185 QIGTPTYARDLAEVILRILDVKFKITDSNNNLTSNIKHLPSNVEIYHYSNE-GVCSWYDF 243 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 A+ IF E G KV I +K YPT A RP YS L+ SK+ NI+I W + ++ Sbjct: 244 AKAIF----EIEGIDIKVNPIESKDYPTPAKRPFYSVLNKSKIKRDFNIKIPYWIDSLKE 299 Query: 286 ILVNI 290 L + Sbjct: 300 CLERL 304 >gi|194364284|ref|YP_002026894.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia R551-3] gi|194347088|gb|ACF50211.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia R551-3] Length = 312 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 118/302 (39%), Positives = 158/302 (52%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------DLLKPKDFASFFLSFS 50 M LV+G NGQ+ Q L V +++ R I D +P + Sbjct: 1 MTVLVLGGNGQVGQELLRALVPLGKVVTTTRSGILPDGSVCETADFDQPDSLPALLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P V++N AAYTAVD+AE E + AF++NAE G IA+ + +P ++ STDYVFDG Sbjct: 61 PSVVVNAAAYTAVDRAEREVDAAFAVNAEAPGVIARWCAAHDVPFVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG SK GE+ V + ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDEPTAPLGVYGISKRDGEDAVRAAGGRHLIFRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA Q + + S G +H+TA G SW FAE IF Sbjct: 181 ALRVVADQIGTPTPAALIADVTAQALQHPGQLS-----GTWHLTA-SGQTSWYGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G V I + +YPT A RPA+S LD KL + W EG+ ++ Sbjct: 235 AEALATGVLAKVPAVEAIPSSEYPTPAKRPAWSVLDNRKLQQDLGTALPDWHEGLAIVMN 294 Query: 289 NI 290 I Sbjct: 295 EI 296 >gi|307609553|emb|CBW99053.1| dTDP-4-keto-L-rhamnose reductase [Legionella pneumophila 130b] Length = 294 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 156/292 (53%), Gaps = 5/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ + + E+ R +D K + PD+IIN AA Sbjct: 1 MKILVTGANGQVGTEIIKRFSSSEHEVYACTRDILDCSKLERVHDVLSEIKPDLIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP++A +NAE + +P I++STDYVFDG E + Sbjct: 61 YTAVDKAEDEPDLAHIVNAEFVCRLVNYCTLKNVPLIHLSTDYVFDGEKEGAYHETDIPH 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K GE+ + S Y+ILR +WV+ G NF+ ++L LA R+E+++V DQ Sbjct: 121 PVSTYGRTKWEGEQAILSQLKKYIILRVSWVFGEQGKNFVKTILNLASSRKELNIVSDQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA IAR + +I I +S G++H G +W +FA + E+ Sbjct: 181 GRPTSARDIARVLFEIVQK-IRHSSFDYWGLYHYAGQ-GVTNWHEFANVFLNMAKEKQLL 238 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I +++YPT+A RP S L+ +K+ I+ +WK + +++ + Sbjct: 239 LTLTDLNPIKSQEYPTRATRPKNSVLNTTKIETILGIKSCSWKNDLPDVIDH 290 >gi|229095804|ref|ZP_04226783.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-29] gi|229114755|ref|ZP_04244169.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-3] gi|228668820|gb|EEL24248.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-3] gi|228687637|gb|EEL41536.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-29] Length = 286 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 6 RVIITGANGQLGKQLQEELSPEEYDIYPFDKKLLDVTNISRVQQVVQEIRPHIIIHCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 66 TKVDRAEKEQDLAYLINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHNPAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +GSNF+ +M+RL KE+ EI+VV DQ G Sbjct: 126 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGSNFVKTMMRLGKEKDEITVVADQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + + ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 186 SPTYVADLNMMVNKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMN 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ ++A RP YS + L +++ +W+EG+ + Sbjct: 234 VNVLPVSTEEFGSEAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 282 >gi|39933196|ref|NP_945472.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas palustris CGA009] gi|39652821|emb|CAE25563.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 297 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 144/292 (49%), Positives = 198/292 (67%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G +GQ+AQ+L + EI+ + RP+IDL + D + + PD ++N AA Sbjct: 1 MRIVVTGRHGQVAQALYERAAGTNAEIVLLSRPEIDLTRQSDIETALSAVKPDAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE EP++A++INAEGAGA+A+AA +G+P + +STDYVFDG + P E PTN Sbjct: 61 YTAVDQAESEPDLAYAINAEGAGAVARAAAKLGVPMVQLSTDYVFDGTAEQPYRETDPTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SKLAGE VA T ++ +LRT+WVYS FG NF+ +ML LA++R E+ VV DQ Sbjct: 121 PLSVYGASKLAGERAVAKATPDHAVLRTSWVYSPFGKNFVRTMLALARQRDEVRVVWDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLI-ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PTSAL IA ++ + NL+ E + + LRGIFHMTAD G +WA FAE IF S GG Sbjct: 181 GSPTSALDIADGVLGVVRNLLAEPTRSDLRGIFHMTAD-GTATWAAFAEAIFAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P +KV I T +YPT A RP S LD S LA H IR+ W++ ++ + + Sbjct: 240 PSAKVIPIPTTEYPTPAKRPTNSRLDSSALAAAHGIRLPHWRQSLQPCIERL 291 >gi|163939118|ref|YP_001644002.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis KBAB4] gi|163861315|gb|ABY42374.1| dTDP-4-dehydrorhamnose reductase [Bacillus weihenstephanensis KBAB4] Length = 284 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS L +++ TW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAVRPKYSIFQHKMLQLNGFLQMPTWEEGLERFFIE 280 >gi|322389254|ref|ZP_08062814.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 903] gi|321143998|gb|EFX39416.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 903] Length = 283 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAEKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMKNLAKTHKILTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|226941909|ref|YP_002796983.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9] gi|226716836|gb|ACO75974.1| DTDP-4-dehydrorhamnose reductase [Laribacter hongkongensis HLHK9] Length = 294 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 104/293 (35%), Positives = 155/293 (52%), Gaps = 10/293 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G NGQ+ L E++ + R + DL +P +F P +I+N AA+T Sbjct: 5 RILLTGANGQVGFELRRALAPLGEVLAITRHEADLQQPSSILPLLDAFRPRLIVNAAAWT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE +P+ A+ +NA G +A+ A ++ STDYVFDGL+ P DE P +PL Sbjct: 65 AVDLAEQQPDAAWQVNAVLPGVLAQWAADRQARLVHYSTDYVFDGLASRPYDETDPAHPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK AGEE V VI+RT+WV+ G NFL ++LRLA ER ++++V DQ G Sbjct: 125 SVYGQSKWAGEEAVRVAGGAPVIVRTSWVFGAHGHNFLKTVLRLAAEREQLAIVADQTGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG---- 237 PT A IA + + + T +H+ G SW +A + + G Sbjct: 185 PTPASLIADVTAHLVRHWPDEGAT-----YHLAGQ-GETSWHGYACEVVRIARALGWSLR 238 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I T YP A RPA S LDC K+ + + W+ GVR +L ++ Sbjct: 239 ATETAIRPIATSDYPLPAVRPANSRLDCRKIQADLQLWLPDWQSGVRQVLASL 291 >gi|325680905|ref|ZP_08160442.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 8] gi|324107369|gb|EGC01648.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 8] Length = 295 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 151/304 (49%), Gaps = 26/304 (8%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSF 49 MK V G GQ+ ++ + + E + D +D+ + Sbjct: 1 MKFFVTGVGGQLGHDVMAELAKRGYEAVGSDILDSVPQDIEYKKLDITDKSAVEQVITAV 60 Query: 50 SPDVIINPAAYTAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+++ AA+TAVD AEDE +IN +G IA+ ++ IYISTDYVFDG Sbjct: 61 KPDVVVHCAAWTAVDAAEDEENIPKVRAINVDGTRNIAEVCKALDCKMIYISTDYVFDGR 120 Query: 108 SRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P N+YG+SKL GE VA Y I+R AWV+ GSNF+ +ML + Sbjct: 121 GEEAWKPDCKDYAPQNVYGQSKLDGEFAVAETLEKYFIVRIAWVFGKNGSNFVKTMLNVG 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K+ E+ VV DQ GTPT +AR ++ +A +T G +H T +GG +SW DF Sbjct: 181 KKHPEVRVVNDQIGTPTYTPHLARLLVDMA-------ETDKYGYYHATNEGGYISWYDFT 233 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I+ ++ G +KV + T +Y +KA RP S LD SKL + TW+E + Sbjct: 234 CEIYRQA----GLDTKVTPVTTAEYGLSKAARPFNSRLDKSKLTEKGFKPLPTWQEALSE 289 Query: 286 ILVN 289 +++ Sbjct: 290 FIIH 293 >gi|166713450|ref|ZP_02244657.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 302 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 152/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDKLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|71065770|ref|YP_264497.1| putative dTDP-4-dehydrorhamnose reductase [Psychrobacter arcticus 273-4] gi|71038755|gb|AAZ19063.1| putative dTDP-4-dehydrorhamnose reductase [Psychrobacter arcticus 273-4] Length = 301 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 MK +++G NGQ+ L +I + R D+ + + PDV+ Sbjct: 1 MKIVLLGKNGQVGWELQRALQPLGHVISLDRQMNDNGLCGDITNFTAIEQLYATIEPDVV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AAYT VDKAE + + A IN +A + I S+DYVFDG TP E Sbjct: 61 INAAAYTTVDKAESDYKQADLINHLAVKHLADMSKHFNSLLINYSSDYVFDGTLDTPWSE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P+N YG++K GE + ++ RT+WVY G+NF+ +ML+LA+ + E+++ Sbjct: 121 TDDRMPINNYGRTKYDGEMALEKSGARFINFRTSWVYGTHGNNFIKTMLKLAQSKEELNI 180 Query: 175 VCDQFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + DQ G PT A IA Q + + L+ +SL G +++ A G SW D+AE+IF + Sbjct: 181 IADQIGAPTGAALIADITAQALRYYLLNKQPSSLHGHYNLAAK-GECSWFDYAEFIFATA 239 Query: 234 AERGG---PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G ++ I T QYPT A RP S L+ KL + + W++GV +L + Sbjct: 240 QKNIGTELLIKQLNPIPTSQYPTPAKRPLNSRLNTEKLQTHFQLHLPHWQQGVAQVLGEL 299 >gi|68643605|emb|CAI33828.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643661|emb|CAI33873.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGRELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILK------ 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 230 GTDVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|303230605|ref|ZP_07317355.1| dTDP-4-dehydrorhamnose reductase [Veillonella atypica ACS-049-V-Sch6] gi|302514660|gb|EFL56652.1| dTDP-4-dehydrorhamnose reductase [Veillonella atypica ACS-049-V-Sch6] Length = 301 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + + + + R + DLL K + L + P II+ AAY Sbjct: 20 KILVTGGTGQLGSDIIKLLETYHINYVSPTRNEFDLLNSKQMNEYILKYKPTHIIHCAAY 79 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+ + +N G + + GI +YISTDYVFDGL NP Sbjct: 80 TAVDQAENNQRDCYYVNVVGTEKLVMLSKMFGIIMMYISTDYVFDGLGTHFHTIDESINP 139 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG++K GE V + + I+R +W++S G+NF+ +M+RL+ ER +SVV DQ G Sbjct: 140 INWYGRTKAEGEAWVRNNIRRHFIIRVSWLFSNHGNNFVKTMIRLSNERESLSVVDDQIG 199 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +AR I+Q+ T G +H+ + G SWADFA+ I ++ Sbjct: 200 SPTYTVDVARVILQLL-------GTQSYGTYHV-RNEGVCSWADFAQEII----KQQKID 247 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K++RI + +YPT A RP S LD S+L + I + TW++ + +L Sbjct: 248 CKIHRIPSIEYPTPAKRPLNSRLDMSQLID-LGITMPTWQDALNRMLAE 295 >gi|261856084|ref|YP_003263367.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2] gi|261836553|gb|ACX96320.1| dTDP-4-dehydrorhamnose reductase [Halothiobacillus neapolitanus c2] Length = 306 Score = 312 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 126/294 (42%), Positives = 170/294 (57%), Gaps = 8/294 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIINPAA 59 L++G+ GQ+A L +I R + DL + DF S P+ I+N AA Sbjct: 9 LILGDQGQVAYELKRELATLGRVIAASRSTLPVAIDLAQHNDFESLIRQTKPNCIVNAAA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EPE+A INAE +A+AA IP I+ STDYVFDG ++ P E PTN Sbjct: 69 YTAVDKAEQEPELAMRINAEAVAELAQAAAKANIPLIHYSTDYVFDGTAQQPYQEDQPTN 128 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SKLAGE+ +A+ N++ILRT+WVY G NFL +M RLA+ER E+SVV DQ Sbjct: 129 PQGVYGQSKLAGEQAIAASGANHLILRTSWVYGTRGGNFLRTMRRLAREREELSVVADQT 188 Query: 180 GTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 G PT + IA+A QI L + T GI+H+ + G SW DFA I ++ Sbjct: 189 GCPTWSRHIAQATAQILIQLKRDPSLITEHSGIYHLVS-SGQGSWHDFATAIIEHQRQQE 247 Query: 238 GPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T Q+PT A RPAYS L+ KLA T +R+ W+E + + + Sbjct: 248 TIACQRIVPITTAQFPTPAKRPAYSVLNTDKLAETFGVRLPDWREALSQVNAEL 301 >gi|168481428|gb|ACA24907.1| RmlD [Shigella dysenteriae] Length = 299 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 108/296 (36%), Positives = 157/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ + I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVSAWVIHYSTDYVFPGTGEIPWQEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W ++A IF E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWYEYASLIFSEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + K+ I T YPT A RP S L+ K ++ + W GV+ ++ + Sbjct: 238 GIQLAIKKLNAIPTTCYPTPALRPLNSRLNTEKFQQCFDLTLPMWNIGVKRMINEL 293 >gi|313500047|gb|ADR61413.1| DTDP-4-dehydrorhamnose reductase [Pseudomonas putida BIRD-1] Length = 301 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 112/298 (37%), Positives = 158/298 (53%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI---DLLKPKDFASFFLSFSPDVIIN 56 MK L++G +GQ+ L +++ + R DL A ++PDVI+N Sbjct: 1 MKVLLLGKDGQVGWELQRSLAPLGQLLALNARSQAYCGDLANLPGLAETVRVYAPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE + E AF +NA+ G +A+AA G ++ STDYVF G P E Sbjct: 61 AAAYTAVDKAESDREQAFKVNADAVGVLARAAAECGALLVHYSTDYVFPGQGTQPWREDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN YG SKLAGE+ + + ++I RT WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 AVDPLNTYGASKLAGEQAIQAAGCQHLIFRTCWVYAARGNNFAKTMLRLAAERDSLGVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A IA + + SL G++H+ A+ G +W +A Y+ ++A Sbjct: 181 DQHGAPTGAELIADITAHAI--VATRRNPSLAGLYHLAAE-GETTWCGYARYVLEQAAVH 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V + T+ YPT A RPA S LD KL + + W+ GV +L I Sbjct: 238 GVPLKAHAENVTPLTTEAYPTAAMRPANSRLDTHKLQKAFALTLPDWRLGVARMLTEI 295 >gi|313904864|ref|ZP_07838236.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cellulosolvens 6] gi|313470297|gb|EFR65627.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cellulosolvens 6] Length = 305 Score = 312 bits (800), Expect = 3e-83, Method: Composition-based stats. Identities = 106/313 (33%), Positives = 155/313 (49%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVAGQLGHDVMNELAARGYEGVGTDLAPEYSGIQDGSAVTTMPYVSLDITDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 A PD I++ AA+TAVD AEDE + +IN G +A+AA ++ +YIS Sbjct: 61 VAKVIAEVKPDAIVHCAAWTAVDLAEDEDKQDKVKAINVSGTQHLAEAAKAVDAKMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G P D PLN+YG+SKL GE VA + Y I+R AWV+ + G NF Sbjct: 121 TDYVFNGQGTEPWDPDCRDYAPLNVYGQSKLGGELAVAETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T +GG Sbjct: 181 IRTMLNVGKTHPEVRVVNDQIGTPTYTLDLARLLVDML-------ETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF I+ ++ G +KV + T++Y +KA RP S LD SKLA + + Sbjct: 234 YISWYDFTVEIYRQA----GLDTKVIPVTTEEYGLSKAARPFNSRLDRSKLAASGFKPLP 289 Query: 278 TWKEGVRNILVNI 290 WK+ + L I Sbjct: 290 DWKDALSRFLKEI 302 >gi|257791795|ref|YP_003182401.1| dTDP-4-dehydrorhamnose reductase [Eggerthella lenta DSM 2243] gi|257475692|gb|ACV56012.1| dTDP-4-dehydrorhamnose reductase [Eggerthella lenta DSM 2243] Length = 300 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 105/305 (34%), Positives = 157/305 (51%), Gaps = 29/305 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 M+ LV G NGQ+ L + + D E++ ++D+ +F Sbjct: 1 MRILVTGGNGQLGNELQRILREGRSEIGSIPGVYADAEVVATDVAELDVTDADAVMAFVA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I+N AA T VD E + AF +NAE G +A+AA++ G + +STDYVF G Sbjct: 61 QGGFDLIVNGAAMTNVDGCETAEDAAFRVNAEAPGNLARAAEAAGAKFVQVSTDYVFSGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PT P++ YG++KLAGEE+ + ++RTAW+Y G NF+ +M+RL Sbjct: 121 DPAPRVESDPTGPVSAYGRTKLAGEERSLEACSRCFVVRTAWLYGYVGKNFVKTMMRLGA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R E++VV DQ G PTSA +A I++IA T G++H T + G SWADFA+ Sbjct: 181 DRDEVTVVDDQLGNPTSANDLAHEILEIAA-------TENYGVYHCTNE-GTCSWADFAQ 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + + G V R +++Y P A RPAYS L L +T ++ W+E + Sbjct: 233 AVMEGA----GLDCTVARCTSEEYAAMNPASAKRPAYSSLRNKHLEDTVGDKMRPWREAL 288 Query: 284 RNILV 288 L Sbjct: 289 SAYLK 293 >gi|299140997|ref|ZP_07034135.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris C735] gi|298577963|gb|EFI49831.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris C735] Length = 290 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + I + +D+ F II Sbjct: 1 MNILVTGANGQLGNEIQLVAKASHDHYIFTDVCEGYQKLDITNLNAIQEMVKQFDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE EI ++NA +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAESAGEIVETLNATAPENLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLHGEQKIQATGVKHIIIRTAWLYSEFGKNFVKTMLSLTAAKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I+ I N + + GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVILDIIENRKFDGNE---GIYHFSNE-GVCSWFDFTKEI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + + Sbjct: 234 LAGHTNCDILPCHSNEFPSPVTRPAYSVLDKTKIKETFGIKIPYWTDSLKKCMAAL 289 >gi|291521042|emb|CBK79335.1| dTDP-4-dehydrorhamnose reductase [Coprococcus catus GD/7] Length = 304 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 M+ V G GQ+ + + + E + + +D+ + Sbjct: 1 MRFFVTGVGGQLGHDVMNELLKRGHEGVGSDIQECYSGAADGSAVTRAPYRTLDITDREA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 + PDV+ + AA+TAVD AED +INA G IA + IYIS Sbjct: 61 VHNVIAEIHPDVVFHCAAWTAVDLAEDADNVNRVRAINAGGTKNIADVCKELNCKMIYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G P PLN+YG++KL GE V+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFNGQGSEPWQPDCKDYAPLNVYGQTKLEGELAVSQILEKYFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML + K + VV DQ GTPT +AR ++ + S+T G +H T +GG Sbjct: 181 IKTMLNVGKTHDTVRVVNDQIGTPTYTYDLARLLVDM-------SETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ ++ G +KV + T++Y +KA RP S L KL + + Sbjct: 234 YISWYDFTKEIYRQA----GYQTKVLPVTTEEYGLSKAARPFNSRLAKGKLVEAGFVPLP 289 Query: 278 TWKEGVRNILVNI 290 TW++ + L I Sbjct: 290 TWQDALSRYLKEI 302 >gi|329119276|ref|ZP_08247963.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] gi|327464623|gb|EGF10921.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] Length = 289 Score = 312 bits (800), Expect = 4e-83, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 166/288 (57%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G NGQ+ + L + I+ GR +D+ P +F P VIIN AAY Sbjct: 1 MNILITGANGQVGRELVARLQDRATILAAGRDTLDITDPAAVERTAAAFRPHVIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A+++N + +A+AA +++STDYVFDG P E P P Sbjct: 61 TAVDKAESDAATAYAVNRDAVRHLARAAAEHNAALLHLSTDYVFDGTLNRPYRETDPATP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +IYG+SKLAGE+ A+ ++ILRTAWV+ G NF+ +MLRLA+ER + +V DQ+G Sbjct: 121 QSIYGQSKLAGEQA-AAACPRHIILRTAWVFGAHGRNFVKTMLRLARERDSLGIVADQYG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A IA A+I IA + T GI+H + + +SW FA+ IF +A + Sbjct: 180 APTAAADIAAALITIAERTQFHRFTDW-GIYHFSGN-PYLSWYGFAKTIFQAAAAQNLLP 237 Query: 241 S--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + ++ + T+ YPT A RPA S LDC+K+ +T I S W+ + ++ Sbjct: 238 AAPQLKALATEDYPTPARRPANSRLDCTKIRDTFGIAPSDWQAALADL 285 >gi|89899525|ref|YP_521996.1| dTDP-4-dehydrorhamnose reductase [Rhodoferax ferrireducens T118] gi|89344262|gb|ABD68465.1| dTDP-4-dehydrorhamnose reductase [Rhodoferax ferrireducens T118] Length = 300 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 149/301 (49%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------IDLLKPKDFASFFLSFSPD 52 MK L+ G GQ+ L E++ +G D A PD Sbjct: 1 MKILLFGRGGQVGWELQRSLSVLGELVALGSDASHNPDGLCGDFSHLPGLAETIRRVKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI+N AA+TAVDKAE EPE A ++NA G +A A +G ++ STDYVFDG + Sbjct: 61 VIVNAAAHTAVDKAEAEPERARALNALAPGVLAAEAQKLGAWLLHYSTDYVFDGSGQQAW 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YGK+KL GE V S ++I RT+WVY+ G NF +MLRLA ER + Sbjct: 121 REGDATGPLSVYGKTKLEGEHLV-SACAKHLIFRTSWVYAARGGNFAKTMLRLAGERDTL 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +V+ DQ G PTSA +A + + + G++H A GG SW +A Y+ + Sbjct: 180 TVIDDQIGAPTSAELLADVTAHALAKAMRAPELA--GLYHCVA-GGETSWYGYARYVLGQ 236 Query: 233 SAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G +V T YPT A RP S LD KL + + W++GV +L Sbjct: 237 AQALGCQLKAGPDQVLPTATASYPTPARRPLNSRLDTLKLQAAFGLVLPPWQQGVARMLA 296 Query: 289 N 289 Sbjct: 297 E 297 >gi|332878816|ref|ZP_08446531.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683167|gb|EGJ56049.1| dTDP-4-dehydrorhamnose reductase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 279 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 100/284 (35%), Positives = 152/284 (53%), Gaps = 9/284 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G NGQ+ + + + +D+ + + SF +I+N AAY Sbjct: 1 MHVLVTGANGQLGSEIKANADRKARYFFTDADVLDITQIDEIRSFVHQNHIGLIVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAED+ +A SIN +A + IP I+ISTDYVF G TP E T P Sbjct: 61 TNVDKAEDDTAVAESINHTAVAHLATVCAEVSIPLIHISTDYVFGGNGNTPYTEADNTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-FGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE+ + ++I+RTAW+YS+ FG NF+ ++ RL++ER E+ VV DQ Sbjct: 121 LGVYGRTKLAGEQAIQQAGIEHLIIRTAWLYSLQFGHNFVKTIQRLSRERNELKVVFDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT+A +A ++ + N + ++H + + G SW DFA I ++ G Sbjct: 181 GSPTNAADLAAFVVYVIENALYKGKRE---VYHFSNE-GVCSWYDFATEIVAQA----GN 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KV + ++P+K RP YS LD +KL + W+E + Sbjct: 233 ACKVLPCRSSEFPSKVTRPPYSVLDKAKLKTDFAYEVRHWREAL 276 >gi|168485503|ref|ZP_02710011.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|168486649|ref|ZP_02711157.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|168487601|ref|ZP_02712109.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|194398504|ref|YP_002037043.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae G54] gi|68642462|emb|CAI32872.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642544|emb|CAI32940.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643180|emb|CAI33474.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643826|emb|CAI34017.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|183569610|gb|EDT90138.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|183570363|gb|EDT90891.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|183571159|gb|EDT91687.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1087-00] gi|194358171|gb|ACF56619.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus pneumoniae G54] Length = 283 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVNPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|149012104|ref|ZP_01833213.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP19-BS75] gi|1881547|gb|AAC44972.1| 32.3 kDa cps19fO gene product [Streptococcus pneumoniae] gi|68643461|emb|CAI33706.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147763706|gb|EDK70640.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP19-BS75] Length = 283 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +A+A++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVARASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|296876720|ref|ZP_06900768.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 15912] gi|296432222|gb|EFH18021.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis ATCC 15912] Length = 283 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKD------YGYYHLSNDAKEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|255282137|ref|ZP_05346692.1| dTDP-4-dehydrorhamnose reductase [Bryantella formatexigens DSM 14469] gi|255267456|gb|EET60661.1| dTDP-4-dehydrorhamnose reductase [Bryantella formatexigens DSM 14469] Length = 313 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 148/318 (46%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRP------------------DIDLLKPKD 41 MK V G GQ+ + + + E I +D+ Sbjct: 1 MKVFVTGVGGQLGHDVMNELAKRGHEGIGSDIAPQYSGIVDGSAVTEMPYVQLDITDAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PD +++ AA+TAVD AED+ E +NA G IA+ + +Y+S Sbjct: 61 VERTLREAAPDAVVHCAAWTAVDLAEDDDKVEKVRLVNATGTDNIARVCKMLDCKMLYLS 120 Query: 100 TDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE VA + I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWEPDCKAYKPLNVYGQTKLEGELAVAEQLEKFFIVRIAWVFGVNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML L K+ I VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IRTMLNLGKKYDTIRVVSDQVGTPTYTYDLARLLVDMI-------ETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGP-----YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW +F + IF ++ G + KV + T++Y +KA RP S LD KLA Sbjct: 234 YISWYEFTKEIFRQAEAMGHKEYSEEHVKVCPVTTEEYGVSKAKRPFNSRLDKRKLAENG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + W++ + L I Sbjct: 294 FTPLPVWQDALHRYLQAI 311 >gi|229189410|ref|ZP_04316427.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876] gi|228594001|gb|EEK51803.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 10876] Length = 284 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NSGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|15902367|ref|NP_357917.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae R6] gi|116515912|ref|YP_815846.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae D39] gi|168482597|ref|ZP_02707549.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1873-00] gi|2804686|gb|AAC38675.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804698|gb|AAC38685.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804717|gb|AAC38701.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|4200436|gb|AAD10184.1| Cps2O [Streptococcus pneumoniae D39] gi|15457878|gb|AAK99127.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae R6] gi|68642310|emb|CAI32735.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643689|emb|CAI33898.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644389|emb|CAI34484.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|116076488|gb|ABJ54208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae D39] gi|172043655|gb|EDT51701.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC1873-00] gi|332077649|gb|EGI88110.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA41301] Length = 283 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|326318819|ref|YP_004236491.1| dTDP-4-dehydrorhamnose reductase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375655|gb|ADX47924.1| dTDP-4-dehydrorhamnose reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 296 Score = 312 bits (799), Expect = 5e-83, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + + D +P D A + PDVI+N Sbjct: 1 MNILLFGKGGQVGWELQRSLSVLGTVTALDFDSTSHCGDFSRPHDIAGTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP++A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDLARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGARPWTEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KL GE+++ + ++ILRT+WVY G NF +MLRLA+ER ++V+ Sbjct: 121 VPAPLSVYGRTKLEGEQRIQASGARHLILRTSWVYGARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE- 235 DQ+G PT A +A A +L + + G++H+ A G W +A Y+ ++ Sbjct: 181 DQWGAPTGADLLADATAHAIRHLQQR--PADAGLYHLVA-AGETHWHAYACYVLEQAQRI 237 Query: 236 ---RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +PT A RP S LD + T + + W+ G+ +L I Sbjct: 238 QPALKIAARDVVAVPTSAFPTPAVRPHNSRLDTRRFQATFGLALPHWQAGIARMLTEI 295 >gi|28868295|ref|NP_790914.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato str. DC3000] gi|213967234|ref|ZP_03395383.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato T1] gi|301381030|ref|ZP_07229448.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato Max13] gi|302059361|ref|ZP_07250902.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato K40] gi|302134878|ref|ZP_07260868.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28851532|gb|AAO54609.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato str. DC3000] gi|213928076|gb|EEB61622.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato T1] gi|331019592|gb|EGH99648.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 301 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 157/300 (52%), Gaps = 14/300 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R DL + P Sbjct: 1 MKILLLGKNGQVGWELQRSLAVLGEVVALDRHTASTVYGDLSGDLSSLDGLRNTIRCVKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A + ++ STDYVFDG + Sbjct: 61 QVIVNAAAYTAVDKAETEQELAHTVNALASQVLAEEARQLDALLVHYSTDYVFDGTGTSA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E +P+N YG +KL GE+ + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 121 WKESDAVSPVNYYGATKLEGEQLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 ++V+ DQ G PT A +A + + L GI+H+ A G VSW +A+Y+ Sbjct: 181 LNVIADQIGAPTGAELLADIATAALQQTLARPE--LCGIYHL-APAGEVSWHAYAQYVID 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 238 FARAHGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLME 297 >gi|115350808|ref|YP_772647.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115280796|gb|ABI86313.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 298 Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 148/291 (50%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQI L ++ R +DL +F P +I+NPAAYTA Sbjct: 11 ILVTGVTGQIGFELLRALQGLGRVVPCDRSVLDLADLDRVRAFARDLKPALIVNPAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E E+A +N + A+ A G I+ STDYVFDG E NPLN Sbjct: 71 VDTAESEVELARRLNVDVPRVFAEEAARSGGTLIHYSTDYVFDGTKVGAYVETDAPNPLN 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG +KL GE+ +A+ +VILRT+WVY G NFL +ML+L ER E+ +V DQ G P Sbjct: 131 AYGATKLEGEQAIAATGCAHVILRTSWVYGRRGRNFLRTMLKLGAERPELRIVADQVGAP 190 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T A IA A I ++DT G++H+T+ G SW FAE IF + Sbjct: 191 TWAATIAAATSHIIAQAAASADTDWWARRAGVYHLTS-AGATSWCGFAEAIFGIAMASHA 249 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P +V I + YPT A RPA S + KLA +++ W++ ++ L Sbjct: 250 P--RVVPISSDDYPTPAKRPANSKMALGKLAEVFGMQMPDWRDALQLCLSE 298 >gi|68643267|emb|CAI33545.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVTEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|281424260|ref|ZP_06255173.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris F0302] gi|281401529|gb|EFB32360.1| dTDP-4-dehydrorhamnose reductase [Prevotella oris F0302] Length = 290 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + I + +D+ F II Sbjct: 1 MNILVTGANGQLGNEIQLVAKASHDHYIFTDVCEGCQKLDITNLNAIQEMVKQFDVKCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA++ VD AE EI ++NA +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWSNVDAAESAGEIVETLNATAPENLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLRGEQKIQATGVKHIIIRTAWLYSEFGKNFVKTMLSLTAAKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I+ I N + + GI+H + + G SW DF + I + Sbjct: 181 VFDQCGTPTYAGDLADVILDIIENRKFDGNE---GIYHFSNE-GVCSWFDFTKEI---AR 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W + ++ + + Sbjct: 234 LAGHTNCDILPCHSDEFPSPVIRPAYSVLDKTKIKETFGIKIPYWTDSLKKCMAAL 289 >gi|68643118|emb|CAI33423.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643150|emb|CAI33450.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643351|emb|CAI33618.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643547|emb|CAI33781.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643577|emb|CAI33805.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643718|emb|CAI33925.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643937|emb|CAI34108.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643967|emb|CAI34134.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643997|emb|CAI34160.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|221231239|ref|YP_002510391.1| dTDP-4-dehydrorhamnose reductase RmlD [Streptococcus pneumoniae ATCC 700669] gi|2804705|gb|AAC38691.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804711|gb|AAC38696.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804724|gb|AAC38707.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|2804730|gb|AAC38712.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|3320402|gb|AAC38760.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] gi|220673699|emb|CAR68192.1| dTDP-4-dehydrorhamnose reductase RmlD [Streptococcus pneumoniae ATCC 700669] gi|309952142|gb|ADO95351.1| RmlD [Streptococcus pneumoniae] Length = 283 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +A+A++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVARASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|68643210|emb|CAI33498.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|258543637|ref|YP_003189070.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01] gi|256634715|dbj|BAI00691.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01] gi|256637771|dbj|BAI03740.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-03] gi|256640825|dbj|BAI06787.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-07] gi|256643880|dbj|BAI09835.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-22] gi|256646935|dbj|BAI12883.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-26] gi|256649988|dbj|BAI15929.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-32] gi|256652978|dbj|BAI18912.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656032|dbj|BAI21959.1| dTDP-4-dehydrorhamnose reductase [Acetobacter pasteurianus IFO 3283-12] Length = 301 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 153/289 (52%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A SL ++ I VGRP+ D +P+ + + P ++N AA+TA Sbjct: 11 VLVTGGKGQLATSLVNL--GGPRIRCVGRPNFDFDRPETLKTTLDAIKPVAVVNAAAWTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE EPE A N G +A+ GIP I++STDYVF G P E P +P Sbjct: 69 VDLAESEPEAAARANTTGPELLARLCAERGIPFIHVSTDYVFAGDKGAPYLETDPVSPQT 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE+++ + +ILRT+WVYS G NF+ +ML + + VV DQ G P Sbjct: 129 VYGSTKAEGEQRILAADPRSIILRTSWVYSAHGKNFVRTMLNAGAKNPALKVVGDQRGNP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T + +ARAI+ I + + GI+H G +W AE +++E G Sbjct: 189 TCSDDLARAILSILATIEKTGWKDEYAGIYHACG-TGETTWHGLAEAALQKASEYGQAKP 247 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ +PT A RPA S +D SKLA +++ W+E V ++ +I Sbjct: 248 TITAIRTEDWPTPAKRPADSRMDNSKLARVFGVQMPQWQESVNKVVHHI 296 >gi|168494597|ref|ZP_02718740.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC3059-06] gi|183575540|gb|EDT96068.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae CDC3059-06] gi|332203524|gb|EGJ17591.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA47368] Length = 283 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|34863496|gb|AAQ82926.1| dTDP-4-keto-L-rhamnose reductase [Raoultella terrigena] Length = 296 Score = 311 bits (798), Expect = 6e-83, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L E++ V ++ DL A PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGEVVAVDYFDKELCGDLTDLAGIAQTVRQVKPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N G +A+ + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNERGVAVLAEESAKLGALMVHYSTDYVFDGEGEHYRPEDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE +A ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALAQANPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A E + ++ G +H+ A G SW D+A ++F + Sbjct: 181 DQHGAPTGAELLADCTAIAIRE--ELRNRAVAGTYHLVA-SGETSWYDYARFVFDVARAN 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++V + Sbjct: 238 GVLLAIKEVNGIPTTAYPTPAKRPLNSRLSNEKFQRVFGVTLPGWRQGVERVVVEV 293 >gi|169834012|ref|YP_001693879.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Hungary19A-6] gi|13377433|gb|AAK20694.1|AF316640_14 RmlD [Streptococcus pneumoniae] gi|3907613|gb|AAC78677.1| dTDP-L-rhamnose synthase Cps19aO [Streptococcus pneumoniae] gi|68643375|emb|CAI33637.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644532|emb|CAI34599.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|168996514|gb|ACA37126.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Hungary19A-6] Length = 283 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGRELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|332686305|ref|YP_004456079.1| dTDP-4-dehydrorhamnose reductase [Melissococcus plutonius ATCC 35311] gi|332370314|dbj|BAK21270.1| dTDP-4-dehydrorhamnose reductase [Melissococcus plutonius ATCC 35311] Length = 280 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 17/288 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + ++ I ++D+ + SF P +I + AAYT Sbjct: 2 ILITGGNGQLGTELRYLLDELAIDYISTDSKELDITNKEQTYSFVQKIKPTIIFHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPTN 119 +VDKAE+E E+ IN G + +AA S+ +YISTDYVFDG + TN Sbjct: 62 SVDKAEEEGKELDEDINVNGTVNVVEAAKSVDATLVYISTDYVFDGTKKEDFYKTTDQTN 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++KL GE+ V + Y I+RT+WV+ +G NF+ +M +LA+ ++++VV DQF Sbjct: 122 PQNEYGRTKLLGEQAVQKDLSRYYIIRTSWVFGQYGHNFVFTMQKLAETHQQLTVVNDQF 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A I+ I GI+H++ + SW +FA+ I Sbjct: 182 GRPTWTRTLAEFIVFIIKK------QEPYGIYHLSNENS-CSWYEFAQEILK------NN 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + Q+P KA RP YS +D SK N I TW+E + +L Sbjct: 229 EVKVLPIDSTQFPQKAKRPQYSVMDLSKAEN-LGFNIPTWQEALEKML 275 >gi|238927718|ref|ZP_04659478.1| possible dTDP-4-dehydrorhamnose reductase [Selenomonas flueggei ATCC 43531] gi|238884434|gb|EEQ48072.1| possible dTDP-4-dehydrorhamnose reductase [Selenomonas flueggei ATCC 43531] Length = 315 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 147/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + C + E+ V L + + PD I++ AA Sbjct: 32 MKILITGATGQLGHDCAEECRARGHEVHGVSSELFPLSDENVMRAVLDATEPDAILHAAA 91 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEP + +NA G +A+ A +Y+STDYVF G P + T Sbjct: 92 YTAVDKAEDEPSLCRKVNAAGTEILARLARERDAKLLYVSTDYVFPGTGDAPHETNELTA 151 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGEE V + Y I+RT+WV+ G NF+ +ML L+K + +S+V DQ Sbjct: 152 PHNVYGASKLAGEEAVQQHLEKYFIVRTSWVFGAHGKNFVKTMLELSKTHKSLSIVADQI 211 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A ++ + ++ GI+H T + G SWA FA IF ++ G Sbjct: 212 GSPTYTRDLAPLLVDML-------ESEKYGIYHATNE-GFCSWAKFAAEIFRQA----GA 259 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + YPTKA RP S L L R+ TW++ V L + Sbjct: 260 DVNVTSVPSHMYPTKAVRPKNSRLSKKSLDEAGFRRLPTWQDAVGRFLGEL 310 >gi|253580788|ref|ZP_04858051.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847858|gb|EES75825.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 313 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 146/318 (45%), Gaps = 35/318 (11%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRP------------------DIDLLKPKD 41 M+ V G GQ+ + + + E + +D+ Sbjct: 1 MRIFVTGVGGQLGHDVMNELAKRGYEGVGSDIAPSYSGIADGTAVTTMPYVQMDITDKAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYIS 99 + D +I+ AA+TAVD AEDE +N G IA + I +Y+S Sbjct: 61 VEKVIKEANVDAVIHCAAWTAVDAAEDEENQPKVRLVNVTGTQNIADVCKELDIKMLYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GE V+ N + I+R AWV+ G NF Sbjct: 121 TDYVFDGQGTTPWEPDCKDYKPLNVYGQTKLDGELAVSGTVNKFFIVRIAWVFGKNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +M+ L K +SVV DQ GTPT +AR +I + +T G +H T +GG Sbjct: 181 IKTMINLGKTHDTLSVVNDQIGTPTYTYDLARLLIDMI-------ETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGP-----YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTH 272 +SW DF + IF ++A G P V + T +Y +KA RP S LD SKL Sbjct: 234 YISWYDFTKEIFRQAAAMGHPEYLPENMTVNSVTTAEYGASKAARPFNSRLDKSKLTANG 293 Query: 273 NIRISTWKEGVRNILVNI 290 + TW++ + L + Sbjct: 294 FTPLPTWQDALGRYLKEL 311 >gi|68643633|emb|CAI33851.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 311 bits (798), Expect = 7e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|332297028|ref|YP_004438950.1| dTDP-4-dehydrorhamnose reductase [Treponema brennaborense DSM 12168] gi|332180131|gb|AEE15819.1| dTDP-4-dehydrorhamnose reductase [Treponema brennaborense DSM 12168] Length = 310 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 112/299 (37%), Positives = 161/299 (53%), Gaps = 16/299 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFL-SFSPDVIINPAAY 60 +IG NG + ++ + D+E + R +ID+ SF + D IIN AAY Sbjct: 2 IWLIGKNGMLGSEIARQLERADLEYVGTDR-EIDITDQAALDSFANGNHGIDWIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAV+KAE+EPE+A +NAEGAG IA+ A G I+ISTDYVFDG +TP E P +P Sbjct: 61 TAVEKAEEEPELAARLNAEGAGNIARTAKKAGARMIHISTDYVFDGAGKTPYTEIMPISP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGK+K GE+ V ++ + RTAW+Y G NF+ +M+ L R I+VV DQFG Sbjct: 121 LGVYGKTKADGEKLVTETLDDAYVFRTAWLYGPRGKNFVYTMVDLMNGRDSITVVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS----------LRGIFHMTADGGPVSWADFAEYIF 230 +PT + +AR II + ++ ++ GI+H T + G +W DFA I+ Sbjct: 181 SPTCTMDLARCIITVILRDRQSGVSAAAGRQTISAVPPGIYHCTGE-GETTWYDFACEIY 239 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +G V T +Y K RPAYS L SKL I++ +W+E + + Sbjct: 240 RIGKLKGIVTRNCTVKPCTTAEYGAKVARPAYSVLSKSKLKKALGIKLPSWQESLLAFM 298 >gi|157149997|ref|YP_001450309.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gordonii str. Challis substr. CH1] gi|157074791|gb|ABV09474.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gordonii str. Challis substr. CH1] Length = 283 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEKVEKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDVAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I +W++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPSWQDALKEFYKQ 280 >gi|312867796|ref|ZP_07728002.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis F0405] gi|311096859|gb|EFQ55097.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parasanguinis F0405] Length = 283 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRHLLDERNEEYVAVDVAEMDITNAEKVDEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKA++ G +YISTDY+FDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKASEKYGATLVYISTDYIFDGNKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENRKE------YGYYHLSNDAEEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|308175508|ref|YP_003922213.1| spore coat polysaccharide synthesis protei SpsK [Bacillus amyloliquefaciens DSM 7] gi|307608372|emb|CBI44743.1| spore coat polysaccharide synthesis protei SpsK [Bacillus amyloliquefaciens DSM 7] gi|328913857|gb|AEB65453.1| spore coat polysaccharide synthesis protein SpsK [Bacillus amyloliquefaciens LL3] Length = 282 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 149/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ + L + E+I + + +++ + F + PD+++N AAY Sbjct: 3 KVLVTGAAGQLGRELCRRLKQEGYEVIALTKAMMNISDQQSVRHSFSHYKPDIVVNTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN GA + A++ G I+ISTDYVF G P P +P Sbjct: 63 TSVDKCETELDKAYLINGIGAYYTSLEAENTGARFIHISTDYVFSGKGTRPSHTDDPADP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + N+ I+RT+WVY G+NF+ +ML+LA ++ VV DQ G Sbjct: 123 GTIYGKSKKLGEELIRLTGKNHTIIRTSWVYGSGGNNFVNTMLKLADTHDQVRVVNDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A +I + G +H A+ G SW +FA+ IF ES G Sbjct: 183 APTYTKDLAETVIGLFDR--------PPGTYH-AANSGVCSWYEFAKAIFEES----GRT 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V + T++Y K RPAYS L + + + W++ +R+ L Sbjct: 230 ADVLPVTTEEYGNKTPRPAYSVLSLESIERQ-GLGMRHWRDALRDYLQR 277 >gi|157376143|ref|YP_001474743.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] gi|157318517|gb|ABV37615.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] Length = 303 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 110/300 (36%), Positives = 157/300 (52%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L +EII ++D+ ++ SPD+IIN AAY Sbjct: 1 MKVLVTGKGGQLAWELEQTTPSYIEIISFSANELDITNQAQVNEVVIAHSPDIIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A+++N +G+ +A I I+ISTD+VFDGL TP NP Sbjct: 61 TAVDKAETDKETAYAVNEKGSEYLALICKEISAKLIHISTDFVFDGLKNTPYQTDDTPNP 120 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG SKL G+ KV + +I+RT W+YS G+NF+ +MLRL E+ ++ ++ DQ Sbjct: 121 VNVYGDSKLQGDIKVNNLLGCQAIIIRTGWMYSENGNNFVKTMLRLMVEKEQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQIA-------HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 GTPT A +A I + I N TS I+H T D G SW DFA I Sbjct: 181 GTPTWAKGLAEMIWALISRHSGIEERDIRNLSTSSAQIYHWT-DAGVASWYDFAVAIQEL 239 Query: 233 SAERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + E+G V I YPT A RP++S +D + + W++ + +L + Sbjct: 240 AIEKGMLDKAIPVRPIPASAYPTPAQRPSFSVIDKTTAEQASRVETKHWRKQLSAMLDEL 299 >gi|225376962|ref|ZP_03754183.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM 16841] gi|225211283|gb|EEG93637.1| hypothetical protein ROSEINA2194_02604 [Roseburia inulinivorans DSM 16841] Length = 307 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 111/300 (37%), Positives = 168/300 (56%), Gaps = 24/300 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ DV I + +D+ K + S + P+VI Sbjct: 20 KILVTGCNGQLGRAINKEYAGSDVTFINTDVAEGEGVTALDITKIEQVLSLVRAEQPEVI 79 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA+++G I++STDYVF+G P E Sbjct: 80 INCAAHTNVDACEKQWDAAYRINALGPRNLSIAAEAVGAKMIHVSTDYVFEGNGTKPYTE 139 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F NP++ YGK+KL GE+ V ++N++ I RTAW+Y G NF+ +ML L++ E+SV Sbjct: 140 FDAPNPVSAYGKTKLEGEKFVQQFSNHFFIFRTAWLYGD-GKNFVKTMLNLSETHDEVSV 198 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++A+AI T G++H T + G +WADF E IF Sbjct: 199 VCDQLGSPTSAVELAKAIHHF-------EGTENYGLYHATCE-GDTNWADFTEEIF---- 246 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +R G +KV + +KQY P A RPAYS LD + +++ WK+ + + + Sbjct: 247 KRAGKSTKVNHVTSKQYKQMNPAAADRPAYSILDNYMMRLADGYQMADWKDALDVYMAEL 306 >gi|148988118|ref|ZP_01819581.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP6-BS73] gi|68642410|emb|CAI32828.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147926582|gb|EDK77655.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP6-BS73] Length = 283 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPVKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|58580418|ref|YP_199434.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58425012|gb|AAW74049.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 302 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 153/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG + Sbjct: 61 PSRVVNAAAYTAVDRAEQDREGATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGKA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYREDAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPTSA I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTSA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|317052619|ref|YP_004113735.1| dTDP-4-dehydrorhamnose reductase [Desulfurispirillum indicum S5] gi|316947703|gb|ADU67179.1| dTDP-4-dehydrorhamnose reductase [Desulfurispirillum indicum S5] Length = 285 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 107/289 (37%), Positives = 149/289 (51%), Gaps = 11/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G +GQ+ LS I GR +D+ D F ++ I+N AAYT Sbjct: 3 KILVTGGHGQLGGELSERL--GPACISAGREVLDVTAYGDVERFCRTYPIAGIVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE E E AF IN +GA +A+ + +GIP I+ISTD+VFDG P E NPL Sbjct: 61 AVDAAESECENAFRINEKGAAHLARISGDLGIPFIHISTDFVFDGTKTVPYVEGDVPNPL 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGEE V S + I+RT+W+YS G NF+ ++L+ A ++ VV DQ G+ Sbjct: 121 GVYGASKLAGEEAVMSANDRSTIVRTSWLYSSRGKNFVKTILQHASRSGQLRVVDDQVGS 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A ++ ++ S +FH A+ G SW DFA I G Sbjct: 181 PTYAGDLADMLV----RMLSCSSVGGGRVFHF-ANEGVCSWYDFACAI----TAMAGIKC 231 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +YP A RP YS L+ K+ + I W+ + + + Sbjct: 232 DIEPIETSEYPLPAKRPHYSVLNKRKIKTEFGVTIPYWRNSLERCISRL 280 >gi|75759811|ref|ZP_00739888.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228899902|ref|ZP_04064146.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] gi|228906954|ref|ZP_04070821.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|74492711|gb|EAO55850.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228852702|gb|EEM97489.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 200] gi|228859742|gb|EEN04158.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis IBL 4222] Length = 284 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYT----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|228938438|ref|ZP_04101047.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971317|ref|ZP_04131944.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977927|ref|ZP_04138308.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407] gi|228781844|gb|EEM30041.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis Bt407] gi|228788353|gb|EEM36305.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821175|gb|EEM67191.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938945|gb|AEA14841.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 284 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|229016573|ref|ZP_04173513.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1273] gi|229022780|ref|ZP_04179304.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1272] gi|228738592|gb|EEL89064.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1272] gi|228744749|gb|EEL94811.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1273] Length = 284 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ +P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDVTNISRVQQVVQEINPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA IA A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYLINAIGARNIAVASQLVGAKLVYISTDYVFQGDRPDGYDEFYSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G NF+ +M+RL KER E+SVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGKNFVKTMMRLGKEREELSVVADQIG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMIINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFLYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS S L ++S+W+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAARPKYSIFQHSMLRLNGFAQMSSWEEGLERFFIE 280 >gi|229108781|ref|ZP_04238388.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15] gi|229149526|ref|ZP_04277758.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550] gi|228633872|gb|EEK90469.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus m1550] gi|228674672|gb|EEL29909.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock1-15] Length = 284 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VHVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|149018055|ref|ZP_01834514.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP23-BS72] gi|3818499|gb|AAC69541.1| Cps23fR [Streptococcus pneumoniae] gi|147931619|gb|EDK82597.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP23-BS72] Length = 283 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVVEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|30019368|ref|NP_830999.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579] gi|229126629|ref|ZP_04255641.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4] gi|229143930|ref|ZP_04272347.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24] gi|29894911|gb|AAP08200.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus ATCC 14579] gi|228639493|gb|EEK95906.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST24] gi|228656569|gb|EEL12395.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-Cer4] Length = 284 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|260887633|ref|ZP_05898896.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|330837995|ref|YP_004412575.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|260862649|gb|EEX77149.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] gi|329745759|gb|AEB99115.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sputigena ATCC 35185] Length = 279 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 104/288 (36%), Positives = 144/288 (50%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+ + + + +E R D L F + P II+ AA Sbjct: 1 MKVLVTGVSGQLGFDVMRELLARGIEAKGASRSDFSLTDFAAMRRFVEAHRPTAIIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAEDEPE+ +NA G +A A IG +YISTDYVF G + Sbjct: 61 YTAVDKAEDEPELCREVNAAATGELAHLAKEIGAKFLYISTDYVFPGTGEDFYEPEDEKA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG+SKL GEE I+R +WV+ G NF+ +MLRL + E+SVV DQ Sbjct: 121 PCNVYGESKLLGEEAAREALEELFIVRISWVFGENGKNFIKTMLRLTETHEELSVVGDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR + + T G++H T + G SWA+ A E+ G Sbjct: 181 GSPTYTRDLARLLADMIV-------TEKYGVYHATNE-GTCSWAELA----AEALRCAGK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++V I T++YPTKA RP S L L + R+ W++ V + Sbjct: 229 KTRVKAIKTEEYPTKAKRPKNSRLSKKCLDDAGFSRLPDWRDAVARYV 276 >gi|293407677|gb|ADE44331.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100407|gb|ADQ27803.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100441|gb|ADQ27835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] gi|312100471|gb|ADQ27857.1| putative dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei] Length = 325 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 113/294 (38%), Positives = 158/294 (53%), Gaps = 6/294 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ L +++ GR DL +P+ A S PDVI+N AAYT Sbjct: 28 RILVTGQNGQVGWELRRALAPLGDVVACGRETADLSRPETLAPLVASVKPDVIVNAAAYT 87 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE++ +A +NAE G +A+AA ++ STDYVFDG +RTP E +PT+P+ Sbjct: 88 AVDLAEEQEALAHRVNAESVGVLAQAAREHDALLVHYSTDYVFDGTARTPYVETAPTSPV 147 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG++KLAGE + + + +++ LRT WVY G NFL +MLRL+ ER + VV DQ G Sbjct: 148 NAYGRTKLAGERAIEAVSGDWLTLRTTWVYGARGRNFLRTMLRLSHERDALRVVADQIGA 207 Query: 182 PTSALQIARAIIQIAHNLI--ENSDTSLRGIFHMTADGGPVSWADFAEYIFWES---AER 236 PTSA IA + + + T G+FHMTA G SW FA I + Sbjct: 208 PTSARMIADLTAHVVAHAQRERRAGTFESGLFHMTA-AGETSWHGFASAIIDAARAVRAE 266 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RPA S LD K + W++ + ++ ++ Sbjct: 267 AIKTKTVEPISSDAYPTPARRPANSILDNGKFDRRFMLNRLDWRQALALVVDDL 320 >gi|228964269|ref|ZP_04125388.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795366|gb|EEM42854.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar sotto str. T04001] Length = 284 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELNSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPEGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYT----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L +++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 280 >gi|261400440|ref|ZP_05986565.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ATCC 23970] gi|269209890|gb|EEZ76345.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ATCC 23970] Length = 287 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 108/292 (36%), Positives = 160/292 (54%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + F++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAATFAVNASAVYNLASAAHRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----SSPVRGIYHFAG-GKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|298255294|ref|ZP_06978880.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502162|ref|YP_003724102.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae TCH8431/19A] gi|298237757|gb|ADI68888.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae TCH8431/19A] Length = 283 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQSLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|222152856|ref|YP_002562033.1| dTDP-4-dehydrorhamnose reductase [Streptococcus uberis 0140J] gi|222113669|emb|CAR41597.1| dTDP-4-dehydrorhamnose reductase [Streptococcus uberis 0140J] Length = 284 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + +VE + V ++D+ P F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERNVEYVAVDVAEMDITNPDMVDEVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN +G IAKA +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNQAINVDGTVNIAKACQKYNATLVYISTDYVFDGTKTVGQEWLETDIP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y + + I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYVDQFYIIRTAWVFGHYGKNFVFTMQNLAKTHPKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + + N + G +H++ D SW DFA+ I ++ Sbjct: 182 YGRPTWTRTLAEFMCHLTENQKD------YGYYHLSNDSKEDTSWYDFAKEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E + Sbjct: 232 --DVEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALNEFYKQ 280 >gi|313673141|ref|YP_004051252.1| dtdp-4-dehydrorhamnose reductase [Calditerrivibrio nitroreducens DSM 19672] gi|312939897|gb|ADR19089.1| dTDP-4-dehydrorhamnose reductase [Calditerrivibrio nitroreducens DSM 19672] Length = 298 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 15/297 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +IG G + LS + + V I + +I + + F S I+N AAYT Sbjct: 2 IWIIGARGMLGTELSEILKSNSVPFIATDK-EISITDYESLGQFVRDRSIKFIVNCAAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL------SRTPIDEF 115 AVDKAEDE ++ +INA+G IAK A IG I+ISTDYVF G P E Sbjct: 61 AVDKAEDEVDLCTTINADGVENIAKVAKQIGATVIHISTDYVFSGESIIENGKPRPYLED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PT+P +IYGKSKL GE+++ S +I+RT+W+Y G+NF+ +M RL +E++EI+VV Sbjct: 121 DPTSPTSIYGKSKLEGEKRLLSIVPESIIIRTSWLYGEHGNNFVYTMFRLMREKKEIAVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA- 234 DQ+G+PT +ARAI+Q+ + + + GI+H + + G +SW DFA I+ Sbjct: 181 SDQYGSPTWTYDLARAILQMINL---SKNKLSFGIYHYSNE-GEISWYDFAVEIYRLGRE 236 Query: 235 -ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E + I T+ YPTKA RP YS L K+ + + WK+ +R+ + I Sbjct: 237 YEILKEDCNIKPIKTEDYPTKAMRPKYSVLSKEKIKR-LGVEVPFWKDSLRSFISGI 292 >gi|68643515|emb|CAI33751.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATKDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|260592180|ref|ZP_05857638.1| dTDP-4-dehydrorhamnose reductase [Prevotella veroralis F0319] gi|260535814|gb|EEX18431.1| dTDP-4-dehydrorhamnose reductase [Prevotella veroralis F0319] Length = 302 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 144/296 (48%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + + I D +D+ + II Sbjct: 9 MNILVTGANGQLGNEMQIVSQKSKDKYIFTDVCDGYTKLDITNLEAIRKMVKDNDIKCII 68 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI +NA +A A + ++ISTDYVF G TP E Sbjct: 69 NCAAWTNVDKAETAGEIVEMLNAIAPENLAIAMKEVNGLLVHISTDYVFGGDPYNTPCKE 128 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++ILRTAW+YS FG NF+ +M+ L + ++ V Sbjct: 129 DMKGTPTGVYGLTKLHGEQKIQATGVKHIILRTAWLYSEFGHNFVKTMINLTATKPQLKV 188 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I + GI+H + + G SW DF I + Sbjct: 189 VFDQCGTPTYAGDLADAIYDIVEQRKYEGNN---GIYHFSNE-GVCSWYDFTIKI---AE 241 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I+I W++ ++ + + Sbjct: 242 LVGNRNCDIQPCHSDEFPSPVTRPAYSVLDKTKIKETFGIKIPYWEDSLKKCIKGL 297 >gi|229177736|ref|ZP_04305110.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 172560W] gi|228605700|gb|EEK63147.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus 172560W] Length = 284 Score = 310 bits (796), Expect = 1e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKGLHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NSGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|326385993|ref|ZP_08207617.1| putative dTDP-4-dehydrorhamnose reductase [Novosphingobium nitrogenifigens DSM 19370] gi|326209218|gb|EGD60011.1| putative dTDP-4-dehydrorhamnose reductase [Novosphingobium nitrogenifigens DSM 19370] Length = 297 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 142/291 (48%), Positives = 191/291 (65%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G +GQ+ Q+L I +GRP+IDL +P+ A F F+PDVI++ AA Sbjct: 1 MRIAVTGTHGQVVQALGERSASSGCTIAAIGRPEIDLARPETLAGVFDRFAPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAV+ AE EP++A +N GAGA+A A +G+P I++STDYV+ G P E PT+ Sbjct: 61 YTAVNHAEAEPDLAMVVNCAGAGAVAAEAARLGVPVIHLSTDYVYAGTGNRPWREDDPTD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG +KLAGE VA+ T ++VILRTAW+YS FG+NF+ +MLRLA +R ++ VV DQ Sbjct: 121 PLGVYGVTKLAGERAVAAITPDHVILRTAWIYSPFGTNFVKTMLRLAVDRPQVRVVADQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IA II IA NL+ + +LRG+FHM SWADFAE IF +SA RGGP Sbjct: 181 GNPTSALDIADGIIAIARNLVADRSDALRGVFHMAGRD-EASWADFAEGIFEQSAARGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V RI T ++PT A RPA S LDC KLA H + + W+ + ++ + Sbjct: 240 VASVARITTDEFPTPAPRPANSRLDCGKLAELHGVILPPWRVSLGPVIDRL 290 >gi|120612802|ref|YP_972480.1| dTDP-4-dehydrorhamnose reductase [Acidovorax citrulli AAC00-1] gi|120591266|gb|ABM34706.1| dTDP-4-dehydrorhamnose reductase [Acidovorax citrulli AAC00-1] Length = 296 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L + + D +P D A + PDVI+N Sbjct: 1 MNVLLFGKGGQVGWELQRSLSVLGTVTALDFDSTSHCGDFSRPHDIAGTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP++A ++NA G +A+ A +G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEPDLARTLNATTPGVLAEEAARLGAWLVHYSTDYVFDGSGSRPWTEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL++YG++KL GE+++ + ++ILRT+WVY G NF +MLRLA+ER ++V+ Sbjct: 121 VPAPLSVYGRTKLEGEQRIRASGARHLILRTSWVYGARGGNFAKTMLRLAQERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE- 235 DQ+G PT A +A A +L + + G++H+ A G W +A Y+ ++ Sbjct: 181 DQWGAPTGADLLADATAHAIRHLQQR--PADAGLYHLVA-AGETHWHAYACYVLEQAQRI 237 Query: 236 ---RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +PT A RP S LD + +T + + W+ G+ +L I Sbjct: 238 QPALKIAARDVAAVPTSAFPTPAVRPHNSRLDTRRFQSTFGLALPHWQAGIARMLAEI 295 >gi|296501911|ref|YP_003663611.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] gi|296322963|gb|ADH05891.1| dTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis BMB171] Length = 284 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAATRPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|330951114|gb|EGH51374.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae Cit 7] Length = 303 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 15/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG-RPDI---------DLLKPKDFASFFLSFS 50 MK L++G NGQ+ L +++ + R + DL + + S Sbjct: 2 MKILLLGKNGQVGWELQRSLAVVGQVVALDPRHTVSTAYGDLCGDLSDLESLRNTIRSVK 61 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 PQVIVNAAAYTAVDKAETERELAHTVNALASQVLAEEARTLDALLVHYSTDYVFDGSGDT 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E +P+N YG +KL GE +A+ ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 AWKESDAVSPVNYYGATKLEGERLIAASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRP 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++V+ DQ G PT A +A I A L + L GI+++ A G VSW +A+Y+ Sbjct: 182 TLNVIADQIGAPTGAELLAD--IATAALLQTLAKPELCGIYNL-APAGEVSWHAYAQYVI 238 Query: 231 WESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G P + + I T +YPT A RP S L+ KL + ++ + W+ GV +L+ Sbjct: 239 DLARANGEPLAVETINPIGTIEYPTPAQRPLNSRLNTEKLRHNFSLHLPDWQSGVARMLM 298 Query: 289 N 289 Sbjct: 299 E 299 >gi|229132120|ref|ZP_04260979.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196] gi|228651340|gb|EEL07316.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus BDRD-ST196] Length = 284 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P I++ AAY Sbjct: 4 RIIITGANGQLGKQLQEELNSEEYDIYPFDKKLLDVTNISRIKQVVQEIKPHTIVHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +Y+STDYVF G EF P Sbjct: 64 TKVDGAEKEQDLAYLINAIGARNVAVASQLVGAKLVYVSTDYVFPGDKPDGYHEFHNPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +MLRL KER ISVV DQ G Sbjct: 124 INIYGASKFAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMLRLGKERENISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + R Sbjct: 184 SPTYVADLITVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSHTKIR---- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ + A RP YS L +++STW+EG+ + Sbjct: 232 VNVLPVSTEEFGSAAVRPKYSIFQHKMLQLNGFLQMSTWEEGLERFFIE 280 >gi|218708292|ref|YP_002415913.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio splendidus LGP32] gi|218321311|emb|CAV17261.1| putative dTDP-4-dehydrorhamnose reductase (rfbD) [Vibrio splendidus LGP32] Length = 286 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 10/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK ++ G GQ+A L + Q VE+I VG + D+ F ++ PD++IN AAY Sbjct: 1 MKVVITGKGGQLAYELEQLAPQGVEVISVGINEFDITNEILVTEFLINTKPDLVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ + A+++N G +A A I +++STD+VFDG S P S NP Sbjct: 61 TAVDKAEEDIDAAYAVNELGTKYLANACKQINARILHVSTDFVFDGTSSAPYQTSSEPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG SKLAGE + VI+R+AWVYSI G+NF+ SML L +E++++ ++ DQ Sbjct: 121 INVYGASKLAGELVLQEILPEASVIVRSAWVYSINGNNFVKSMLCLMQEKQQLGIIYDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A+ + IA + GI H T D G SW DFA I E+G Sbjct: 181 GTPTWAKGLAQWLWTIADR------PEVTGIHHWT-DAGVASWYDFAIAIQELGVEKGLL 233 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T +YPT A RP +S +D I+ + W++ + +L ++ Sbjct: 234 KEAIPIFPISTSEYPTLAKRPEFSVIDKFSAEEVSGIKTTHWRKQLSEMLDSL 286 >gi|68644418|emb|CAI34507.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAAFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|297205909|ref|ZP_06923304.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus jensenii JV-V16] gi|297149035|gb|EFH29333.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus jensenii JV-V16] Length = 279 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 147/294 (50%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G NGQ+ Q L + + R +D+ +F P ++ + A Sbjct: 1 MRILITGANGQLGQELQHLLRSRGIDDFDAADRTKLDITDESKVEEYFADNKPKIVYHCA 60 Query: 59 AYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFS 116 AYTAVD AE E + +NA G+ IAKA + +YISTDYVFDG Sbjct: 61 AYTAVDAAEGEGKLLNEKVNALGSEIIAKACEKYNSTLVYISTDYVFDGSKESGEYMPSD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P N YG++KL GE+ V Y + Y I+RTAWVY +G NF+ +ML LAK ++++VV Sbjct: 121 PTGPRNEYGRAKLLGEKAVKKYCSKYFIVRTAWVYGEYGHNFVYTMLNLAKTHKQLTVVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT +A I + N + G + + D G SW DFA+ I + Sbjct: 181 DQIGRPTWTKTLADFITYLVDNKVA------YGTYQCSND-GICSWYDFAKEILKD---- 229 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YPT A+RP YS + LA WK+ + L++I Sbjct: 230 --KDVEVLPVSSEEYPTVAYRPHYSVM---HLAKETGFEFPMWKDALHEFLLSI 278 >gi|21227270|ref|NP_633192.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1] gi|20905619|gb|AAM30864.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina mazei Go1] Length = 269 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 149/287 (51%), Gaps = 28/287 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG++G + L + + +++ D+D+ + L PDV+IN AAYT Sbjct: 7 KTLIIGSSGMLGSDLCKVFP---DAVKLTHHDLDITDREQVIESILKIKPDVVINAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD ED E+AF +N G G IA+A G ++ STDYVFDG + E +P+ Sbjct: 64 NVDGCEDNKELAFQVNGSGPGYIAEACARAGAKLVHFSTDYVFDGSKKE-YVESDIPDPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKL GE+K+ ++Y I+R +W++ I G NF+ +ML+L+ E + VV DQFG Sbjct: 123 NVYGDSKLLGEKKIIENMDDYRIVRISWLFGIHGKNFVETMLKLSGEMDTVKVVNDQFGK 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +AR + +I GI+H+T D G SW +FA I Sbjct: 183 PTYTMDLARKVKEIIEL--------EPGIYHITND-GICSWYEFASSIID---------- 223 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V ++++ KA RP YS L +K + W+E +++ L Sbjct: 224 NVIPCTSEEFQRKAKRPMYSVLVNTKT-----GPMRHWREALKDYLQ 265 >gi|68644635|emb|CAI34686.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELNFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLVKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|260893428|ref|YP_003239525.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4] gi|260865569|gb|ACX52675.1| dTDP-4-dehydrorhamnose reductase [Ammonifex degensii KC4] Length = 278 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G++ +++ + ++I + R +D+ K A + P V++N AA Sbjct: 1 MRVLVTGAAGRLGRAMVKELEERGFDVIGLARQQLDITSRKAVAEVLREYRPRVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE++P AF +N +A + ++ISTDYVFDG P + P Sbjct: 61 YTDVDGAEEDPRRAFLVNGLAVKYLASLCAASEAKLVHISTDYVFDGEKGEPYHVYDPPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG+SK GE + +Y+I+R +W++ G NF+ +LRLA+ EI VV DQ+ Sbjct: 121 PINRYGESKYWGEAAIREEGGDYLIVRISWLFG-TGRNFVSMILRLAETEGEIKVVEDQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT ARAI + RG FH+T + G SW + A + G Sbjct: 180 GSPTYTPDAARAITDLIL-------AGARGTFHVT-NAGTASWYELAC----SAVRLAGI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V ++ +P A RP Y+ LD L + +W++ + L Sbjct: 228 KANVIPCRSEDFPRPARRPRYTVLDPFPLKEYLGYSLPSWEDALERYLAR 277 >gi|134297306|ref|YP_001121041.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134140463|gb|ABO56206.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 320 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 101/316 (31%), Positives = 158/316 (50%), Gaps = 30/316 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----------------------DLLK 38 + L++G NGQ+ L +I + R + DL Sbjct: 7 RILLLGKNGQVGWELQRSLAPLGPVIALDRDGLTPQQAAQLPAWQGQPLLDHPLCGDLSD 66 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 + + P +I+N AAYTAVD+AE E +A +NAE G +A+AA +G ++ Sbjct: 67 LEGLRRTVYALRPQIIVNAAAYTAVDRAESEVGLAHRLNAEAPGVLAQAAHEVGAWLVHY 126 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 STDYVF+G TP E T PLN YG +KL GE+++ ++I RT+WVY+ G NF Sbjct: 127 STDYVFNGSGHTPWQEGDATGPLNAYGLTKLEGEQRILQAGRQHLIFRTSWVYAARGGNF 186 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 +MLRLA+ER ++V+ DQFG PT A IA ++ + +G +H+ A G Sbjct: 187 AKTMLRLARERERLTVIDDQFGAPTGAELIADVTAHALRQVLHTGEG--QGTYHLAA-SG 243 Query: 219 PVSWADFAEYIFWESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 +W +A+++ ++ + + + T+ +PT A RP S L+ S L +T + Sbjct: 244 ETTWHRYAQFVIEQARQLQPHGSWKVQAIDPVPTQTFPTPARRPHNSRLNTSLLKSTFGL 303 Query: 275 RISTWKEGVRNILVNI 290 + TW+ GV +L I Sbjct: 304 HLPTWQRGVDRMLQEI 319 >gi|229101902|ref|ZP_04232616.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28] gi|228681485|gb|EEL35648.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock3-28] Length = 286 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 6 RVIITGANGQLGKQLQEELSPEEYDIYPFDKKLLDVTNISRVQQVVQGIRPHIIIHCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G EF P Sbjct: 66 TKVDLAEKEQDLAYLINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYGEFHNPAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +GSNF+ +M+RL KE+ EI+VV DQ G Sbjct: 126 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGSNFVKTMMRLGKEKDEITVVADQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + + ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 186 SPTYVADLNMMVNKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMN 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ ++A RP YS + L +++ +W+EG+ + Sbjct: 234 VNVLPVSTEEFGSEAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIE 282 >gi|28849790|gb|AAN64547.1| dTDP-L-rhamnose synthase [Streptococcus gordonii] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEMVEKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAXNQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I +W++ ++ Sbjct: 232 --NVEVKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPSWQDALKEFYKQ 280 >gi|307710515|ref|ZP_07646952.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis SK564] gi|307618778|gb|EFN97917.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis SK564] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKNHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAANRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEIKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|217978849|ref|YP_002362996.1| dTDP-4-dehydrorhamnose reductase [Methylocella silvestris BL2] gi|217504225|gb|ACK51634.1| dTDP-4-dehydrorhamnose reductase [Methylocella silvestris BL2] Length = 291 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 147/290 (50%), Gaps = 7/290 (2%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ Q L + V + ++D+ D A F P +++N AAYT Sbjct: 2 ILIFGAGGQVGQELQRAAFGKGVACRALSHAEVDIADAADVARAFDETRPTLVVNAAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE E + A N G G + KA + P I+ISTDYVFDG P E P PL Sbjct: 62 KVDLAETEVDAAQRANEIGPGVVGKACAARETPLIHISTDYVFDGTKTGPYVESDPLAPL 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++K AGE +VILRT+WVY FG+NFL +MLRLA++R E+ VV DQ G Sbjct: 122 GVYGRTKAAGEAAARDAAPRHVILRTSWVYGEFGNNFLKTMLRLARDRDELRVVADQHGC 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTS IA AI++IA L +SD L G++H G +W FA I A G Sbjct: 182 PTSTRDIAAAILRIAPRLETSSD--LYGLYHFAGV-GATNWHGFASRIVEAQANITGRRP 238 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW---KEGVRNILV 288 V I T YPT A RPA S LDCS + W + V L Sbjct: 239 TVAAITTADYPTPARRPANSVLDCSLFEKSFGFSAHNWGEETDAVAKALA 288 >gi|68643239|emb|CAI33521.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V +D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAKMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAKNRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|240144746|ref|ZP_04743347.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82] gi|257203267|gb|EEV01552.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis L1-82] Length = 291 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 110/300 (36%), Positives = 164/300 (54%), Gaps = 24/300 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I + +D+ + + PDVI Sbjct: 4 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 63 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 64 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 123 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F +P++ YGK+K GE+ V + + Y I RTAW+Y G NF+ +MLRLA+ E+SV Sbjct: 124 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYGD-GKNFVKTMLRLAESHDEVSV 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++ARAI T G FH T + G +WA FAE IF Sbjct: 183 VCDQQGSPTSAVELARAIHHF-------EPTENYGTFHATCE-GDTNWAAFAEAIF---- 230 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +R G +KV + ++QY P A+RPAYS L+ + T +++ W++ + + + Sbjct: 231 KRAGKTTKVNHVTSEQYAKMNPASANRPAYSILENYMMKLTDGYKMAEWQDALDEYMKTL 290 >gi|225860395|ref|YP_002741904.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Taiwan19F-14] gi|298229718|ref|ZP_06963399.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae str. Canada MDR_19F] gi|225727776|gb|ACO23627.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae Taiwan19F-14] gi|327390777|gb|EGE89117.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA04375] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D++ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDIIDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A I +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFITYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|89994598|emb|CAI34067.2| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 EPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|227529355|ref|ZP_03959404.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus vaginalis ATCC 49540] gi|227350728|gb|EEJ41019.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus vaginalis ATCC 49540] Length = 283 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 99/291 (34%), Positives = 151/291 (51%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G +GQ+ L + + + G ++D+ + F P V+ + AAY Sbjct: 3 KILITGAHGQLGTELCHLLDEKKIAYDACGSKELDITDQNQVKAKFAELKPAVVFHCAAY 62 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + +N +G +A AA SIG +YISTDYVFDG + + TN Sbjct: 63 TAVDKAEDEAKNLNWQVNEDGTKNVATAAQSIGATMVYISTDYVFDGTNEGEYQVDASTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KL GEE V S + Y I+RT+WV+ +G NF+ +MLRLAK ++VV DQ Sbjct: 123 PKNEYGKAKLTGEEAVKSIMDRYYIIRTSWVFGEYGKNFVYTMLRLAKTHDHLTVVDDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I G + ++ D G +W +FA I Sbjct: 183 GRPTWTRTLAEFMLYAVEHQI------PYGTYQLSND-GSCTWYEFAREILK------NE 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + +YP KA+RP +S + K+ T + TW+E + + + Sbjct: 230 KVEVSPVTSAEYPQKAYRPRHSIMSLDKVKAT-GFEVPTWQEALGRFMDEV 279 >gi|325300032|ref|YP_004259949.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salanitronis DSM 18170] gi|324319585|gb|ADY37476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides salanitronis DSM 18170] Length = 301 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 148/308 (48%), Gaps = 27/308 (8%) Query: 1 MKCLVIGNNGQIAQSLS--------------SMCVQDVEIIRVGRPDIDLLKPKDFASFF 46 M LV G NGQ+ + + + VE + +D+ + S Sbjct: 1 MNILVTGANGQLGNEMRIISKDTDDTYTFTDVVEAEGVETVL-----LDITDAEAVRSIV 55 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 I+N AAYT VDKAE + + ++NAE +A A + ISTDYVF G Sbjct: 56 REKGIRCIVNCAAYTNVDKAETDEALCHTLNAEAPKILALAMKEANGLLVQISTDYVFGG 115 Query: 107 LS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 TP E P +YGK+KL GE V +YVI+RTAW+YS FG NF+ +ML L Sbjct: 116 DPYNTPCREDQKGTPTGVYGKTKLEGERNVQEAGCDYVIIRTAWLYSEFGKNFVKTMLGL 175 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-ENSDTSL--RGIFHMTADGGPVSW 222 + +++VV DQ GTPT A +ARAI + + EN + RGI+H + + G SW Sbjct: 176 TASKPQLNVVFDQAGTPTYAYDLARAIQTVLADYAGENPENGYSKRGIYHFSNE-GVCSW 234 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 DF + I + G + + ++P+ RPAYS LD +K+ + + W + Sbjct: 235 YDFTKKI---AELAGNTECDIRPCHSDEFPSPVKRPAYSVLDKTKIKQVFGVEVPYWTDS 291 Query: 283 VRNILVNI 290 ++ + + Sbjct: 292 LKVCMNRM 299 >gi|149006113|ref|ZP_01829842.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP18-BS74] gi|307126575|ref|YP_003878606.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae 670-6B] gi|13377465|gb|AAK20724.1|AF316642_18 RmlD [Streptococcus pneumoniae] gi|18376694|gb|AAL68418.1|AF246897_15 dTDP L-rhamnose synthase [Streptococcus pneumoniae] gi|18376706|gb|AAL68429.1| dTDP L-rhamnose synthase [Streptococcus pneumoniae] gi|68642433|emb|CAI32848.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642489|emb|CAI32895.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68642516|emb|CAI32916.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643293|emb|CAI33569.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643322|emb|CAI33593.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643404|emb|CAI33660.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643434|emb|CAI33685.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68643749|emb|CAI33951.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|68644362|emb|CAI34460.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] gi|147762469|gb|EDK69430.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae SP18-BS74] gi|149929320|gb|ABR37234.1| RmlD [Streptococcus pneumoniae] gi|306483637|gb|ADM90506.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae 670-6B] gi|312176764|gb|ADQ39191.1| RmlD [Streptococcus pneumoniae] gi|332076802|gb|EGI87264.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pneumoniae GA17545] Length = 283 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V +D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAKMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|85707418|ref|ZP_01038499.1| hypothetical protein ROS217_12331 [Roseovarius sp. 217] gi|85668074|gb|EAQ22954.1| hypothetical protein ROS217_12331 [Roseovarius sp. 217] Length = 281 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 163/290 (56%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L + E++ +GR + DL +P A+ +PD++IN AAY Sbjct: 1 MKILVFGRTGQVATELQRLA----EVVALGRDEADLTQPDRCAAAIRDHAPDLVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+A++E +A IN GA+A+A +GIP ++STDYVFDG P P P Sbjct: 57 TAVDRAQEEETLATVINGAAPGAMARACADLGIPFCHVSTDYVFDGSGTAPRQPSDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE V + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 117 CNAYGRSKLAGEEAVRAAGGQSAILRTSWVFSAHGNNFVRTMLRLSETRDALNVVEDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A++ + ++ G++H + SWA+FA IF R G Sbjct: 177 GPTPAADIAAALLTMGRAMVAGHAG---GLYHFSG-APDASWAEFAREIF----ARAGRA 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T YPT A RP S LDC L I W++GV +L ++ Sbjct: 229 TTVTGIPTSAYPTPAARPLNSRLDCGTLTAEFGIARPDWRDGVSRVLEHL 278 >gi|291534624|emb|CBL07736.1| dTDP-4-dehydrorhamnose reductase [Roseburia intestinalis M50/1] Length = 290 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 110/300 (36%), Positives = 164/300 (54%), Gaps = 24/300 (8%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I + +D+ + + PDVI Sbjct: 3 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 63 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 122 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 F +P++ YGK+K GE+ V + + Y I RTAW+Y G NF+ +MLRLA+ E+SV Sbjct: 123 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYGD-GKNFVKTMLRLAESHDEVSV 181 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 VCDQ G+PTSA+++ARAI T G FH T + G +WA FAE IF Sbjct: 182 VCDQQGSPTSAVELARAIHHF-------EPTENYGTFHATCE-GDTNWAAFAEAIF---- 229 Query: 235 ERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +R G +KV + ++QY P A+RPAYS L+ + T +++ W++ + + + Sbjct: 230 KRAGKTTKVNHVTSEQYAKMNPASANRPAYSILENYMMKLTDGYKMAEWQDALDEYMKTL 289 >gi|259503870|ref|ZP_05746772.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus antri DSM 16041] gi|259168171|gb|EEW52666.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus antri DSM 16041] Length = 280 Score = 309 bits (793), Expect = 2e-82, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 154/291 (52%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G NGQ+ L + + + ++D+ F + P+V+ + AA+ Sbjct: 3 KIMITGANGQLGTELRHLLDEKGIAYDAFDSREMDITDRAAVDQRFAACRPEVVFHCAAF 62 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AEDE ++ +++N G +A+AA G +YISTDYVFDG + +PTN Sbjct: 63 TAVDPAEDEKKDLNWAVNETGTKNVAEAAQRAGATLVYISTDYVFDGTNEGEYQTDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ V + Y I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQ Sbjct: 123 PKNEYGKAKLAGEQLVEKIMDKYYIIRTSWVFGQYGRNFVYTMLRLAKDHDRLTVVADQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I G + ++ D G SW +FA I G Sbjct: 183 GRPTWTRTLAEFMLYAVQHQI------PSGRYQLSND-GSCSWYEFASEILK------GQ 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP KA+RP +S + K+ +W+E ++N L + Sbjct: 230 PVEVAPVTSEEYPQKAYRPRHSIMSLDKVKAV-GFTPISWQEALQNFLKQV 279 >gi|23098583|ref|NP_692049.1| spore coat polysaccharide synthesis [Oceanobacillus iheyensis HTE831] gi|22776809|dbj|BAC13084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Oceanobacillus iheyensis HTE831] Length = 282 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 146/287 (50%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ ++ S + I R+ + ++D+ P SF PD +I+ AAY Sbjct: 5 MRFLITGCEGQLGKAFISKLGLGINIKRLSKKEMDITDPIKIEQQIQSFQPDYVIHTAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD +E P +A +NA G +A+A G ++ S+DYVFDG TP E NP Sbjct: 65 TAVDLSEKHPILALQVNAIGTLHLARACKKYGAKLVFFSSDYVFDGEKNTPYIESDRPNP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK EE + I+RT+W++ +NF+ ++ + A +R+ + V+ DQ G Sbjct: 125 KNNYGLSKWLAEEFILQTLPESYIIRTSWLFGDGENNFVNTIKKNAYKRKPLKVINDQIG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A I + GI+H+ D G SW FA+ I+ E G Sbjct: 185 SPTYTYDLVEACIPLLQL--------PFGIYHIRND-GICSWYSFAQTIYEEC---GTDP 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + +K+Y T A RP+YS L +KL ++ WKE + N + Sbjct: 233 TLITPVTSKEYKTLAKRPSYSVLSMNKLKSSGTKLPRFWKEALCNFI 279 >gi|157161534|ref|YP_001458852.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli HS] gi|300946365|ref|ZP_07160643.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 116-1] gi|157067214|gb|ABV06469.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli HS] gi|300453957|gb|EFK17577.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 116-1] Length = 296 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V ++ DL + A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLEGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATSPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N + G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTAMAIRETLRNPALA--GTYHLVA-SGETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|229068877|ref|ZP_04202171.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185] gi|229078514|ref|ZP_04211074.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2] gi|228704830|gb|EEL57256.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus Rock4-2] gi|228714161|gb|EEL66042.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus F65185] Length = 284 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|228951700|ref|ZP_04113802.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807985|gb|EEM54502.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 284 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERNEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|229043066|ref|ZP_04190796.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676] gi|228726307|gb|EEL77534.1| DTDP-4-dehydrorhamnose reductase [Bacillus cereus AH676] Length = 284 Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E ++A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERGEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAKKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|2804692|gb|AAC38680.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] Length = 283 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGTNGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|320107885|ref|YP_004183475.1| dTDP-4-dehydrorhamnose reductase [Terriglobus saanensis SP1PR4] gi|319926406|gb|ADV83481.1| dTDP-4-dehydrorhamnose reductase [Terriglobus saanensis SP1PR4] Length = 308 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 102/297 (34%), Positives = 159/297 (53%), Gaps = 11/297 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G+ GQ+ +L + ++ R ++DL L+ P +++P AYT Sbjct: 6 RILLTGSTGQLGAALQPLLASLGTVVAPTRSELDLSDAASIRRTMLAVRPRWVVHPGAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EPEIA ++NA G + A IG I STDYVFDG P E T PL Sbjct: 66 AVDRAETEPEIAHAVNAVAPGVFGEEAKRIGAAVIAFSTDYVFDGSGSAPWKETDSTGPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KL GE +A+ ++I RT+WVYS G +FL ++ +LA+E+ ++S++ DQ G Sbjct: 126 NVYGQTKLDGERALAASGAAHLIFRTSWVYSAQGRSFLGTIAKLAREKEKLSIINDQHGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTS--------LRGIFHMTADGGPVSWADFAEYI--FW 231 PTSA +A + L + + G++H A G +W DFA++I F Sbjct: 186 PTSASDLAEMTAYLVRQLEDGGEGRRAEDLVRTQSGVYH-AAGTGEATWFDFAKHIVAFG 244 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +++ ++++ I T +YPT A RP S LDC+KL + + W + V L Sbjct: 245 KASYPDQTFAEILPIPTAEYPTPAKRPLNSRLDCTKLWDIFGWTMPLWTKSVDEALA 301 >gi|167461463|ref|ZP_02326552.1| dTDP-4-dehydrorhamnose reductase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 284 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 160/288 (55%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + + M + E+ +GR D+D+ P+ S P+ +++ AA Sbjct: 1 MKILITGAEGQLGREAVQLMKSRGHEVHGMGRGDLDVADPRSCMSVIDRLRPEAVLHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + + A +NA G+ +A AA+ G YISTDYVFDG + +P Sbjct: 61 YTAVDRAETDADTASKVNALGSRNVAAAAECAGAKLCYISTDYVFDGCADSPYGTDVLPF 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++KL GE S ++ ++RT+WVY +GSNF+ +MLRL +E R+++VV DQF Sbjct: 121 PLNVYGRTKLEGEHWTLSLSSRPFVVRTSWVYGQYGSNFVKTMLRLGQEGRKLTVVNDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + Q+ T G++H ++ G SW FA+ IF ES G Sbjct: 181 GCPTYTADLAGLLEQLLQ-------TDRYGVYH-ASNSGACSWYGFAKAIFEES---GLD 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S ++ +++Y A RP+YS L L + + W+E +R + Sbjct: 230 QSLLHPCSSEEYRQLARRPSYSVLSPDSLTDRGFKPLRPWREALREFI 277 >gi|75674745|ref|YP_317166.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] gi|74419615|gb|ABA03814.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 114/294 (38%), Positives = 164/294 (55%), Gaps = 4/294 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G++GQ+ +L + + +I R DL P+ A F PD+IINPAAY Sbjct: 1 MRILLTGSSGQVGGALRPLLKEGGMVIAPSRSAFDLSNPETLAGALDRFKPDLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE E+AF +NA+ AIA+ + +P I+ STDYVFDG P E SPT P Sbjct: 61 TAVDRAEDERELAFLVNAKAPAAIAEWSARHRVPLIHFSTDYVFDGSGDKPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAG+ + + ++I RT+WVY+ G+NFL ++ RLA ER+E+ +V DQ G Sbjct: 121 LSVYGASKLAGDLAIEAAGGPHLIARTSWVYAASGANFLRTIARLAGERKELRIVADQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPVSWADFAEYIFW--ESAER 236 PT+A IA A+ +I + + + G A G SW FA I +S Sbjct: 181 APTTANTIADAVSRIVLSNASDLSALFARSGGVVNLACAGETSWHGFATAIVGGLKSRGA 240 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + I T +PT+A RP S LD S+L + TW++ + L + Sbjct: 241 GLSVETIIPIATADFPTRARRPGNSRLDLSQLRERFGLTPPTWQDALSTELDRL 294 >gi|307708208|ref|ZP_07644675.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis NCTC 12261] gi|307615654|gb|EFN94860.1| dTDP-4-dehydrorhamnose reductase [Streptococcus mitis NCTC 12261] Length = 287 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGAKGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKHGATLVYISTDYVFDGKKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENCKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEIKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|152971028|ref|YP_001336137.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|152971034|ref|YP_001336143.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955877|gb|ABR77907.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955883|gb|ABR77913.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|260162547|dbj|BAI43789.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 153/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V ++ DL A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLDGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + D +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETL--RDPALAGTYHLVA-SGETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|262282412|ref|ZP_06060180.1| dTDP-L-rhamnose synthase [Streptococcus sp. 2_1_36FAA] gi|262261703|gb|EEY80401.1| dTDP-L-rhamnose synthase [Streptococcus sp. 2_1_36FAA] Length = 283 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITNAEMVEEVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELNYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHPTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAGNQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I +W++ ++ Sbjct: 232 --NVEVKPVDSSQFPAKAKRPLNSTMSLNKAKAT-GFVIPSWQDALKEFYKQ 280 >gi|226323947|ref|ZP_03799465.1| hypothetical protein COPCOM_01724 [Coprococcus comes ATCC 27758] gi|225207496|gb|EEG89850.1| hypothetical protein COPCOM_01724 [Coprococcus comes ATCC 27758] Length = 307 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 24/306 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD---------IDLLKPKDFASFFLSFSP 51 K LV G GQ+ + + + E+ G +D+ + + P Sbjct: 3 KFLVTGAAGQLGKDVVRELENRGYEVTGSGSKKRKTAGRYVKMDITDRNEVEAVMKKLRP 62 Query: 52 DVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D++I+ AA+TAVD AE+ E + +N +G +A A I +YISTDYVF G Sbjct: 63 DIVIHCAAWTAVDAAEEPENYEKVWEVNGKGTSNLASACQKIHAKMVYISTDYVFGGQGS 122 Query: 110 TPIDEF-SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 P + +PLN YG++KL GE+ V + Y I+R AWV+ G+NF+ +ML K Sbjct: 123 RPWEPDCEEFSPLNRYGETKLQGEQTVKAELKEYFIVRIAWVFGKNGNNFVKTMLEQGKR 182 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R+E+ VVCDQ GTPT +A+ + + S T GI+H+T +G VSW DFA+ Sbjct: 183 RKELRVVCDQIGTPTYTADLAKFLANL-------SMTKRYGIYHVTNEGEYVSWYDFAKE 235 Query: 229 IFWESAERGGP---YSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 IF ++ + G KV + T +Y +KA RP S LD ++ + WK + Sbjct: 236 IFAQAVKLGEKEYADVKVIPVTTAEYGISKAARPFNSRLDRKRICEEGFQPLPVWKNALE 295 Query: 285 NILVNI 290 L + Sbjct: 296 RYLQEV 301 >gi|68643857|emb|CAI34042.1| dTDP-4-keto-L-rhamnose reductase RmlD [Streptococcus pneumoniae] Length = 283 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D++ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDIIDAEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 YGRPTWTRTLAEFMTYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 280 >gi|301643906|ref|ZP_07243935.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 146-1] gi|301077726|gb|EFK92532.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli MS 146-1] Length = 296 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 101/296 (34%), Positives = 153/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V ++ DL + A + PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLEGIAQTVRTVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + N + G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETLRNPALA--GTYHLVA-SGETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|322433921|ref|YP_004216133.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] gi|321161648|gb|ADW67353.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] Length = 300 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 99/298 (33%), Positives = 148/298 (49%), Gaps = 11/298 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+ +L ++ R ++DL+ P F +P I+NPAAYTA Sbjct: 2 ILLTGSTGQVGSALVQALAPFGRVVAPTRAELDLVHPASVREFVRKVNPRWIVNPAAYTA 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E A+++NAE + + A G I+ STDY+FDG P E P + Sbjct: 62 VDKAESETAQAYAVNAELPRILGEEAAQSGAAVIHFSTDYIFDGEGTLPYTEKDIPAPHS 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG +KL GE +A+ ++I RT+WVY G NFLL++L AK R E+ +V DQ G P Sbjct: 122 IYGSTKLEGERALAATGAAHLIFRTSWVYGATGKNFLLTILNAAKARPELRIVADQHGAP 181 Query: 183 TSALQIARAIIQIAHNL--------IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 T + +AR + + L G++H A G +W FA+ Sbjct: 182 TWSRDLARLTNHAIARAETLANGRPLPEALQPLSGVYHACA-AGETTWFGFAQAAVEHEQ 240 Query: 235 ER--GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +R + + I T +YPT A RPA S +D SKL + W++ + ++L + Sbjct: 241 QRDPAQKLATLTPITTAEYPTPARRPANSRMDTSKLGSLLGFHFPQWQDSLNSVLAEL 298 >gi|163754601|ref|ZP_02161723.1| putative dTDP-dehydrorhamnose reductase [Kordia algicida OT-1] gi|161325542|gb|EDP96869.1| putative dTDP-dehydrorhamnose reductase [Kordia algicida OT-1] Length = 284 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 162/292 (55%), Gaps = 13/292 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ Q + + Q + D+D+ K +F + D +N Sbjct: 1 MKTVLVTGANGQLGQCIQKIQPQHAKINFHFKSSRDLDITNVKAVNDYFSNHDFDYCVNC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V+ AE E E A+ +NAE A +A+A + I+ISTDYVFDG +TP E Sbjct: 61 AAYTNVELAESEEEKAYLVNAEAAKYLAEACAENNVTLIHISTDYVFDGTKKTPYVETDT 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP+++YG SKL GE+ + NNY I+RT+W+Y+ FG NF ++LR A+E+ +++ + Sbjct: 121 TNPISVYGASKLKGEQNIQEIFNNYFIIRTSWLYAEFGKNFYKTILRKAEEKANLTITTE 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT+A +A I++I N++ GI+H + + G +W DF + I Sbjct: 181 QKGTPTNANDLAELIVEII-----NTENKNYGIYHFSNE-GEATWYDFTKEIIQNLNLAE 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I + Y TKA RP YS LD +K+ N I+ +W+E ++ ++ N Sbjct: 235 AEKPSLKPIAS--YKTKAARPVYSVLDKTKVRNI--IQTISWQESLQQLMKN 282 >gi|289522626|ref|ZP_06439480.1| dTDP-4-dehydrorhamnose reductase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504462|gb|EFD25626.1| dTDP-4-dehydrorhamnose reductase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 287 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M + G NG + + ++ + ++ +++ + +D+ S+ P V++N AAY Sbjct: 3 MIIAITGPNGLLGREVAKVFKKEYDVVELPHDILDITNLNQVREVLSSYMPTVLVNCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+EP A +N G +A A + I ++ISTDYVF+G + TP F +P Sbjct: 63 TAVDRAEEEPAKANLVNGLGVRNLALACRKLDISLVHISTDYVFNGNTDTPWRIFDKRDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK GE + + Y ++RT+W++ G NF+ ++LR A ++ E+ VV DQFG Sbjct: 123 INAYGYSKYLGERYLETINPKYFLVRTSWLFGSGGPNFVSTILRAALKKDELRVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AL +A ++++ T G++H+T + G SW +FA+ I ++ G Sbjct: 183 CPTYALDLACFVLKLVK-------TGAYGVYHVT-NQGITSWYEFAKEILRQA----GID 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + +Y A RP S LD L T S+W++ + L Sbjct: 231 IPVVAVSSDEYTRPAKRPKNSALDPFPLKETVESLPSSWQDALSRFLSE 279 >gi|149277565|ref|ZP_01883706.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149231798|gb|EDM37176.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 288 Score = 309 bits (791), Expect = 4e-82, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 171/292 (58%), Gaps = 13/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + LV G GQ+ Q L+ + + +E + + + + D+L + F +P+ +IN A Sbjct: 3 RILVFGGKGQLGQCLAKVAQERNMIEMFLFLSQEEGDILDEISLSLLFHRENPEYVINCA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE+E ++ IN G+ +AK I I+ISTD+VF+G ++E SPT Sbjct: 63 AYTAVDQAENERDLCELINKTGSINLAKYCQEIKATLIHISTDFVFEGNIPHLLNEESPT 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+N+YG++KL GE +A N ++I+RT+W+YS G+NF+ +M RLA ER E+ V+ DQ Sbjct: 123 NPINVYGRTKLDGELGIARLLNEHIIIRTSWLYSEIGNNFMKTMKRLASERTELGVIVDQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A+ +A II I + G++H + + G SW DFA+ IF S Sbjct: 183 AGTPTYAIDLANTIIDIVKL-----NHHKYGVYHYSNE-GVASWYDFAKAIFDISQ---- 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I+T YPTKA RP YS +D +K+ +T ++I W++ + + + Sbjct: 233 IKIKLNPIYTSAYPTKAKRPMYSVMDKTKIKSTFELQIPYWRDSLVKCIEEL 284 >gi|91215487|ref|ZP_01252458.1| dTDP-4-dehydrorhamnose reductase [Psychroflexus torquis ATCC 700755] gi|91186439|gb|EAS72811.1| dTDP-4-dehydrorhamnose reductase [Psychroflexus torquis ATCC 700755] Length = 283 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 106/292 (36%), Positives = 154/292 (52%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G+NGQ+ Q L + +DL + + +F PD +N A Sbjct: 1 MKILVTGSNGQLGQCLQKHAKSLTLFDFKFETLESLDLTQEETLNLYFEKHRPDFCVNCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT V+ AED AF +NAE +AK + I+ISTDYVFDGL P E Sbjct: 61 AYTNVEGAEDNENSAFQVNAEAVHKLAKLCEKFKTKLIHISTDYVFDGLKNRPYHESDKE 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP+N+YG SK GE + S N Y +LRT+W+YS FG NF ++L+ A + +++ +Q Sbjct: 121 NPINVYGASKFQGETHITSTMNTYFMLRTSWLYSEFGHNFFNTILKKAASQHPLNITTEQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT+A +A+ I+ + D++ G++H + + G +W DFA I E Sbjct: 181 IGTPTNANDLAKFILHLIQT-----DSTDYGLYHYS-NKGEATWYDFARLILEE----KN 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ T YPTKA RP +S LD SK+ +T I I W+E + N+L + Sbjct: 231 LDQEISLQATFSYPTKAKRPKFSVLDKSKVLSTFAIGIPHWRESLVNLLKEV 282 >gi|116618515|ref|YP_818886.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097362|gb|ABJ62513.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 279 Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ Q L + + ++ + +D+ S F PDV+++ AA Sbjct: 1 MKFLITGAKGQLGQELQKLLRERGLDFVAFDSKQLDITNSAAVLSAFEQAQPDVVLHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ E+ + +N +G +A AA + +STDYVFDG + E Sbjct: 61 YTKVDLAEDDGRELNWQVNVDGTKNVADAAKLYEAKLVAVSTDYVFDGTNEGEYLESDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA +++VV DQ Sbjct: 121 NPKNSYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLAATHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + + GI+H++ D G +W DFA I ++ Sbjct: 181 LGRPTWTRTLAEFMLHLVDT------KAGYGIYHLSND-GTATWFDFAREILKDT----- 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + ++P KA+RP +S + K T ISTW+E + L I Sbjct: 229 -DVEVAPVTSAEFPQKAYRPKHSVMSLEKARAT-GFEISTWREALGEFLAGI 278 >gi|285019454|ref|YP_003377165.1| dtdp-4-dehydrorhamnose reductase [Xanthomonas albilineans GPE PC73] gi|283474672|emb|CBA17171.1| probable dtdp-4-dehydrorhamnose reductase protein [Xanthomonas albilineans] Length = 304 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 160/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q L ++ R D +P+D Sbjct: 1 MTVLVFGANGQVGQELLRALAAQGPVLATTRSGRLPDGRACERTDFDRPQDLGGLLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + + A NA+ G IA + +P ++ STDYVFDG Sbjct: 61 PAAVVNAAAYTAVDRAEQDTDAAHRANAQSPGIIADWCAAHAVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E +PT PL +YG +KLAGEE + + +++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYPEDAPTAPLGVYGATKLAGEEAIRASGAHHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I Q+ + + T G +H+TA G +W FAE IF Sbjct: 181 ELRVVADQVGTPTPA----ALIAQVTAHALAQRATLPSGTWHLTA-AGETTWHGFAEAIF 235 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I T +YPT A RPAYS LD SKL ++ + W++G+R ++ Sbjct: 236 ADAVAAGLLPRTPRVLPIATTEYPTPAKRPAYSRLDVSKLQCDFSLELPQWRDGLRQVIG 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|270293357|ref|ZP_06199566.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. M143] gi|270278206|gb|EFA24054.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. M143] Length = 284 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNVDYVAVDVAEMDITNSEMVEKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------YGYYHLSNDAAEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVLPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|288942438|ref|YP_003444678.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180] gi|288897810|gb|ADC63646.1| dTDP-4-dehydrorhamnose reductase [Allochromatium vinosum DSM 180] Length = 302 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 146/296 (49%), Gaps = 12/296 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-----PDIDLLKPKDFASFFLSFSPDVIIN 56 K L+IG NGQ+ L E+I P IDL+ K A PD +IN Sbjct: 12 KLLLIGANGQVGWELRRTLAGVGEVIAASLEGEYGPTIDLMDAKALARLIEDSRPDALIN 71 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE + A +NA+ G + G P I+ STD+VF G E Sbjct: 72 AAAYTAVDKAESDRATAQRLNADAVGEMGALLAERGTPIIHYSTDFVFSGSLGRTYTEDD 131 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN+YG++KL GE + +I RT+WVY G+NFLL+M RL +ER E+ VV Sbjct: 132 SPDPLNVYGETKLGGERALLDSGARALIFRTSWVYGARGANFLLTMRRLFQEREELRVVD 191 Query: 177 DQFGTPTSALQIARAIIQIAHNLIEN--SDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQ G+PT + +A Q+ H ++ + G++H+T G VSW FA I S Sbjct: 192 DQIGSPTWSRMLAEITAQVLHRVLRGDLDLDKVGGLYHLTG-SGQVSWYGFASAILEASG 250 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + I + +Y A RP +S LD + T + + W+ + L + Sbjct: 251 AQ----TNLIPIPSSEYQAPAKRPTFSVLDNGRFQETFGLAMPDWRLSLAQCLEEL 302 >gi|78065446|ref|YP_368215.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] gi|77966191|gb|ABB07571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] Length = 294 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 142/291 (48%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ L ++ R +DL + + P I+NPAAYTA Sbjct: 7 ILVTGVTGQVGFELLRSLQGLGRVVECDRSMLDLSDLDRIRAVVRALQPAFIVNPAAYTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AED+ + A INA+ +A+ A G I+ STDYVFDG E NPLN Sbjct: 67 VDNAEDDVDAARRINADVPRVLAEEAARSGAVLIHYSTDYVFDGAKAGAYTETDVVNPLN 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE + + Y+ LRT+WVY G NFL +ML+L ER E+ VV DQ G P Sbjct: 127 VYGMTKLEGERAIENAGCAYLTLRTSWVYGRRGRNFLRTMLKLGAERPELRVVADQVGAP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA A I + D + G +H++A G SW FA+ I + G Sbjct: 187 TWSKTIAAATAHILSKGLAAHDEAWWQARSGTYHLSA-AGETSWHGFAKAILGIA--MGD 243 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I ++P +A RPA S L KLA T + + W+ + + + Sbjct: 244 DAPAVVPISASEFPVRARRPANSRLSHGKLAETFGLHLPDWEYALGLCMAD 294 >gi|325694243|gb|EGD36159.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK150] gi|327489334|gb|EGF21127.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1058] Length = 284 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKATGFI-IPTWQDALKEFYKQ 280 >gi|119898167|ref|YP_933380.1| dTDP-4-dehydrorhamnose reductase [Azoarcus sp. BH72] gi|119670580|emb|CAL94493.1| dTDP-4-dehydrorhamnose reductase [Azoarcus sp. BH72] Length = 296 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 107/296 (36%), Positives = 156/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E++ + R DL +P++ + +P VI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVLALDRHGSDGLCGDLSRPEELGDTVRAVAPQVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AAYTAVDKAE + +A INA+ +A+ A +G ++ STDYVFDG TP E Sbjct: 61 IAAAYTAVDKAESDAALAQRINADAVAELARQATQLGALLVHYSTDYVFDGSGSTPWRED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +P PL++YG +KLAGE + + ++I RT+WVY+ G NF +MLRLA ER + VV Sbjct: 121 APVAPLSVYGTTKLAGETAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAAERDTLKVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A IA I +++ L G +H+ A G SW +A ++ + Sbjct: 181 ADQIGAPTGADLIADVTAHAIRACIPSAN-DLSGTYHLAA-AGETSWHGYACHVIDTARR 238 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G P + + + YPT A RPA S LD + L T + + W+ GV +L Sbjct: 239 LGHPLKVGLIEPLASADYPTPARRPANSRLDTALLRTTFALNLPDWRSGVDRMLQE 294 >gi|325689985|gb|EGD31989.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK115] Length = 284 Score = 308 bits (790), Expect = 5e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFALEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKATGFI-IPTWQDALKEFYKQ 280 >gi|296111857|ref|YP_003622239.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc kimchii IMSNU 11154] gi|295833389|gb|ADG41270.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc kimchii IMSNU 11154] Length = 284 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + + +D+ + F PDV+ + AA Sbjct: 1 MKFLITGANGQLGQELQKLLRERALGFVAFDSKQLDITNRVAVLAAFEKEQPDVVFHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE E+ + +N +G +A AA G + +STDYVFDG E Sbjct: 61 YTKVDLAEDEGRELNWQVNVDGTKNVADAAKQYGAKLVAVSTDYVFDGTKNNDYVETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA +++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMRRLAATHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + + + G++H++ + G +W +FA I ++ Sbjct: 181 LGRPTWTRTLAEFMLHLINVQ------ATYGVYHLS-NAGTTTWFEFAREILKDT----- 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + ++P KA+RP +S + K T I W+E + L+ + Sbjct: 229 -DVEVTPVTSAEFPQKAYRPRHSVMSLEKAEAT-GFEILNWREALEAFLIGL 278 >gi|328945985|gb|EGG40132.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1087] Length = 284 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|24379279|ref|NP_721234.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans UA159] gi|24377197|gb|AAN58540.1|AE014923_4 dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans UA159] Length = 284 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ K + FL P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLDERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G IAKA + +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|108805888|ref|YP_645825.1| dTDP-4-dehydrorhamnose reductase [Rubrobacter xylanophilus DSM 9941] gi|108767131|gb|ABG06013.1| dTDP-4-dehydrorhamnose reductase [Rubrobacter xylanophilus DSM 9941] Length = 278 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 154/289 (53%), Gaps = 19/289 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ + L+++ E++ +G ++D+ + SP+V+IN AAY Sbjct: 4 RVLVTGAGGQLGRELAALLPAAGHEVVALGHGELDVSDARAVGEALRRHSPEVVINAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E E +A+ +NA G +A+ + +G +++ST+YVFDG S P + + NP Sbjct: 64 TDVDGCESEAGLAYRVNALGPRNLAQLCERLGCELLHVSTNYVFDGRSERPYEPWDRPNP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +++YG +KLAGEE V T + I+RTA VY G NF+ +MLR A+ER + V D++ Sbjct: 124 ISVYGATKLAGEEYVRHLTGRWYIVRTAGVYGE-GRNFVRTMLRAARERSTLKVKDDEYI 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A II++ + GI+H+T + G SW +FA IF + G Sbjct: 183 SPTYARDLAGGIIRVLEGRL-------YGIYHIT-NSGACSWCEFAREIFRIA----GVE 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V + + YP A RP L A+ + W+E + + L Sbjct: 231 AEVVPVPSSGYPLPAARPPNGVL-----ASPEGPELRHWREALSDYLRE 274 >gi|290580716|ref|YP_003485108.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025] gi|254997615|dbj|BAH88216.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans NN2025] Length = 284 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ K + FL P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLNERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G IAKA + +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|2258089|dbj|BAA21509.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus mutans] Length = 284 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ K + FL P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRHLLNERNEDYVAVDVAEMDITKAEKVDEVFLQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G IAKA + +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDGEKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|257792903|gb|ACV67280.1| RmlD [Escherichia coli] Length = 299 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 159/296 (53%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A S PD+I+N Sbjct: 1 MNILLFGKIGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP+ A +NA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPKFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQEED 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G + D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGIHNLHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ + T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLSAVPTTAYPTPARRPHNSRLNTEKYQQNFALVLPDWQVGVKRMLNEL 293 >gi|301067027|ref|YP_003789050.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei str. Zhang] gi|300439434|gb|ADK19200.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei str. Zhang] Length = 280 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKLA------YGIYHLSNDNS-CNWYEFASAIL------AN 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP +S LD SK T +I TW++ ++ L I Sbjct: 228 KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFLQVI 278 >gi|319939385|ref|ZP_08013745.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus anginosus 1_2_62CV] gi|319811371|gb|EFW07666.1| dTDP-4-keto-L-rhamnose reductase rmlD [Streptococcus anginosus 1_2_62CV] Length = 283 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVF G + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFAGDKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVLPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|258517209|ref|YP_003193431.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] gi|257780914|gb|ACV64808.1| dTDP-4-dehydrorhamnose reductase [Desulfotomaculum acetoxidans DSM 771] Length = 287 Score = 308 bits (790), Expect = 6e-82, Method: Composition-based stats. Identities = 96/287 (33%), Positives = 159/287 (55%), Gaps = 12/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+ G NG + + L + + + ++D+ + ++ P++IIN AAY Sbjct: 1 MNILLTGANGMLGKDLIEVLKDKYCLKLTDKNELDITDYIKCEDYIINEKPELIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDK E+E E+A+ +NA G +A + IP ++ISTDYVFDGL E +P Sbjct: 61 TLVDKCEEEKELAYKVNAIGPRNLAIIGNEHNIPILHISTDYVFDGLKGENYLENDIKSP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IYG++K GE+ + + TN + I+RT+W++ G+NF+ +ML+LAK + ++VV DQFG Sbjct: 121 LSIYGETKSLGEDYIVALTNRFYIVRTSWLFGENGNNFIKTMLQLAKSKDRLTVVNDQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A+AI ++ + + GI+H+T + G +W D+A YIF + G Sbjct: 181 TPTYTKDLAKAIAKLI-------EKNCYGIYHIT-NSGYTNWCDYARYIFSLT----GCK 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T+++ A RP +S L+ + ++KE V+ + Sbjct: 229 VTVDPISTEEFNRPAPRPKFSVLENRLWQLEGFPVLRSYKEAVKEYI 275 >gi|121607690|ref|YP_995497.1| dTDP-4-dehydrorhamnose reductase [Verminephrobacter eiseniae EF01-2] gi|121552330|gb|ABM56479.1| dTDP-4-dehydrorhamnose reductase [Verminephrobacter eiseniae EF01-2] Length = 299 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 99/298 (33%), Positives = 152/298 (51%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L + +G D P + PDVI+N Sbjct: 1 MNILLFGRNGQLGWQLQRSLAVLGPVTALGHDSTGHCADFANPCGVVDTVRALRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVD+AE EP++A ++NA GA+A+ A ++ STDYVFDG + P E Sbjct: 61 AAAHTAVDQAESEPDLARTLNALTPGALAQEAARSAALFVHYSTDYVFDGSGQRPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG++KL GE+ V ++I RT+WVY+ G+NF +MLRLA+++ ++V+ Sbjct: 121 PPAPLSVYGRTKLEGEQAVQQSGAQHLIFRTSWVYAARGANFAKTMLRLAQQQERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A +A L + + G++H+ A G +W +A Y+ + + Sbjct: 181 DQWGAPTGAELLADVTAHAIRQLQQRPQDA--GLYHLAA-AGATTWNGYARYVLARARQS 237 Query: 237 GG----PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I +PT A RP S LD KL + + W+ GV +L I Sbjct: 238 PLAGKIMATEVLPISGSAFPTPAIRPRNSRLDTHKLQTRFGLTLPHWQTGVARMLSEI 295 >gi|120555541|ref|YP_959892.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] gi|120325390|gb|ABM19705.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] Length = 295 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 109/294 (37%), Positives = 155/294 (52%), Gaps = 6/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+ L ++I V R D DL K+ A+ +PDV++NPAAY Sbjct: 1 MKILVTGSDGQVGHELLKTLAPLGQVIGVTRKDADLASEKEVAALLARHNPDVVVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + A+++N +A + ++ STDYV+ G E +PT P Sbjct: 61 TAVDKAETEQDAAYALNERAPELMAAWCHAQNRLLVHYSTDYVYPGTGDAAQMETTPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YGKSKLAG+E V +I RT+WVY G NF+L+ML+LA E+ ++VV DQ G Sbjct: 121 ASVYGKSKLAGDEAVLREAPEALIFRTSWVYGARGRNFMLTMLKLAAEKSRLTVVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PT A IA+ + + G+FH+T G SW DFA I + G Sbjct: 181 APTPAWLIAQVTAIAVRERLAGR-ADISGVFHLTC-RGAASWCDFAREIVARARSAGRTL 238 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++VY I T YP A RPA S LD S+L + + W+ + L ++ Sbjct: 239 AMDENQVYPIPTTDYPAPAPRPANSRLDVSRLEQALGLTLPQWQSALSITLADL 292 >gi|26988515|ref|NP_743940.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] gi|24983282|gb|AAN67404.1|AE016367_4 dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] Length = 300 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 117/300 (39%), Positives = 159/300 (53%), Gaps = 11/300 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R DL A+ +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGAEGLCGDLSNLDGLAATIRQLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE + +A INA +A+ ++G I+ STDYVFDG +E Sbjct: 61 NAAAYTAVDKAESDQALAAMINAAAPAVLARETAALGAWLIHYSTDYVFDGSGSQRWEET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PT PL++YG++KL GE + + V+LRT+WVY+ G NF +MLRLA ER +SVV Sbjct: 121 APTGPLSVYGRTKLEGEHAILASGAKAVVLRTSWVYAARGHNFAKTMLRLAAERETLSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG PT A IA I + D GI+H+ A G SW FA+++ + Sbjct: 181 ADQFGAPTGADLIADVTAHILRQIFNGQDNRHLAGIYHLAA-SGETSWHGFAQFVLAHAQ 239 Query: 235 ERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G KV I T+ YP A RP S L KL NT N ++ W++GV+ +L I Sbjct: 240 RTGVALKVTADKVAAISTEAYPVPAPRPRNSRLALGKLENTFNFKMPLWEQGVQRMLDEI 299 >gi|191638979|ref|YP_001988145.1| RmlD [Lactobacillus casei BL23] gi|190713281|emb|CAQ67287.1| RmlD [Lactobacillus casei BL23] gi|215272232|dbj|BAG84631.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei] gi|327383032|gb|AEA54508.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei LC2W] gi|327386219|gb|AEA57693.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei BD-II] Length = 281 Score = 308 bits (789), Expect = 7e-82, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKLA------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP +S LD SK T +I TW++ ++ L I Sbjct: 228 KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFLQVI 278 >gi|315221445|ref|ZP_07863366.1| dTDP-4-dehydrorhamnose reductase [Streptococcus anginosus F0211] gi|315189564|gb|EFU23258.1| dTDP-4-dehydrorhamnose reductase [Streptococcus anginosus F0211] Length = 283 Score = 308 bits (789), Expect = 8e-82, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEMVEKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA+ G +YISTDYVF G + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFAGDKPVGQEWEVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKE------FGYYHLSNDATEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVLPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|327459911|gb|EGF06251.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1057] gi|327473783|gb|EGF19201.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK408] Length = 284 Score = 307 bits (788), Expect = 8e-82, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLAKAKATGFI-IPTWQDALKEFYKQ 280 >gi|296313829|ref|ZP_06863770.1| dTDP-4-dehydrorhamnose reductase [Neisseria polysaccharea ATCC 43768] gi|296839557|gb|EFH23495.1| dTDP-4-dehydrorhamnose reductase [Neisseria polysaccharea ATCC 43768] Length = 287 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G+NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGNNFVRTMLNLARERSPLSTVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ AII++ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|328957827|ref|YP_004375213.1| dTDP-4-dehydrorhamnose reductase [Carnobacterium sp. 17-4] gi|328674151|gb|AEB30197.1| dTDP-4-dehydrorhamnose reductase [Carnobacterium sp. 17-4] Length = 278 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 151/287 (52%), Gaps = 16/287 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + D+ + G ++D+ F + P VI + AAYT Sbjct: 2 ILITGANGQLGTELKKVLDEKDLTYVATGSKELDVADKSAVHQFVSALKPSVIYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AVD AE+E E +N G IA+ A+ +G +YISTDYVFDG ++ S NP Sbjct: 62 AVDAAEEEGKEFNQLVNIIGTRNIAETAEEVGAELVYISTDYVFDGTNQDEYRVDSLPNP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KL GE+ V + I+RT+WV+ FG NF+ +M LA+ ++VV DQ G Sbjct: 122 KNEYGRAKLEGEKIVQEISTKAYIIRTSWVFGEFGKNFVFTMQHLAETHSRLTVVSDQVG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + E G++H++ + G SW +FA I ++ Sbjct: 182 RPTWTRTLAEFMLHLTATHQE------YGLYHLSNE-GECSWYEFATEILKDT------S 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + +++YP KA+RP +S LD SK +T I TW+E + + Sbjct: 229 VEVAPVTSEEYPQKAYRPKHSVLDLSKAKST-GFNIPTWQEALEEFM 274 >gi|228957593|ref|ZP_04119344.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802092|gb|EEM48958.1| DTDP-4-dehydrorhamnose reductase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 284 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G NGQ+ + L ++ +I + +D+ P +II+ AAY Sbjct: 4 RVIITGANGQLGKQLFEELDSEEYDIYPFDKKLLDVTNISRIQQVVQEIKPHIIIHCAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ INA GA +A A+ +G +YISTDYVF G DEF P Sbjct: 64 TKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLVYISTDYVFQGARPDGYDEFHSPAP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +NIYG SK GE+ V N Y I+RT+W+Y +G+NF+ +M+RL KER EISVV DQ G Sbjct: 124 INIYGASKYTGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMRLGKERDEISVVADQVG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + I ++ H TSL G +H++ + G SW +FA+ IF + Sbjct: 184 SPTYVADLNMVINKLIH-------TSLYGTYHVS-NRGSCSWFEFAQKIFSYA----NMK 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + T+++ A RP YS + L ++ +W+EG+ + Sbjct: 232 VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQMPSWEEGLERFFIE 280 >gi|149203264|ref|ZP_01880234.1| dTDP-4-dehydrorhamnose reductase [Roseovarius sp. TM1035] gi|149143097|gb|EDM31136.1| dTDP-4-dehydrorhamnose reductase [Roseovarius sp. TM1035] Length = 281 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 159/290 (54%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+A + E+ +GR DL P A +PD++IN AAY Sbjct: 1 MRILVFGRTGQVATEMQRQA----EVTALGREVADLSDPMACAEAIRDHAPDLVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E ++A IN GA+A+A ++GIP ++STDYVFDG P P P Sbjct: 57 TAVDRAESEEDLATVINGVAPGAMARACANLGIPFCHVSTDYVFDGSGAAPRAPSDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE V + ILRT+WV+S G NF+ +MLRL++ R +SVV DQ G Sbjct: 117 CNAYGRSKLAGEEAVRAAGGQAAILRTSWVFSAHGGNFVKTMLRLSETRDALSVVDDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A++ + ++ G++H + SWADFA IF ++ G Sbjct: 177 GPTPAADIAAALLSMGRAMVAGHAG---GLYHFSG-APDASWADFAREIFAQA----GRV 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T+ YPT A RP S LDC LA I W+ G+ +L + Sbjct: 229 TVVTGIPTRDYPTPAARPQNSRLDCGSLAAEFGIGRPDWRAGLARVLKEL 278 >gi|302382262|ref|YP_003818085.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas subvibrioides ATCC 15264] gi|302192890|gb|ADL00462.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas subvibrioides ATCC 15264] Length = 300 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 113/289 (39%), Positives = 155/289 (53%), Gaps = 3/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G GQ+ + L+ + + R ++DL + F + +IN AYT Sbjct: 8 ILVTGGAGQVGRELARTSWPGGVCLYMPTRSELDLGDADAVRALFAATPFKAVINSGAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E AF+ NA G +A+ + GIP + +STDYVFDGL E P PL Sbjct: 68 AVDKAESEVADAFAANAMGPAILAEVTKAAGIPLVQVSTDYVFDGLGEAHYAESDPVGPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE V + V+LRTAWV S +NFL +MLRLA +R + VV DQ G+ Sbjct: 128 GVYGASKLAGEVAVRTGNPRSVVLRTAWVLSPHRANFLKTMLRLAADRPLVRVVDDQTGS 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSA IA + I +I + + + G++H + G +WA A IF SA GGP + Sbjct: 188 PTSARDIADTLATITLKMIADPE-APTGVYHFV-NAGSTTWAGLAREIFTLSAVLGGPSA 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T QYPT A RPA S L K+ + + W++ V I+ + Sbjct: 246 EVEGITTAQYPTPALRPANSRLSTFKITRDYGVTPRPWQDAVAEIVAEL 294 >gi|325920447|ref|ZP_08182375.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865] gi|325549094|gb|EGD20020.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas gardneri ATCC 19865] Length = 302 Score = 307 bits (788), Expect = 9e-82, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 154/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + + Sbjct: 1 MTTLVFGANGQVGTELLRALEADGAVQATTRSGRLPDGSACETADFDAPEALPALLDWIA 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE +P+ A NA G IA + +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDPDSAMRANALSPGVIAAWCAAHEVPLVHYSTDYVFDGQGTE 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG +KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGGTKLAGEDAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 236 EEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQREFDIVLPDWQLGLQRVIA 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|84622380|ref|YP_449752.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366320|dbj|BAE67478.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 302 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 151/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYRENAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|298209184|ref|YP_003717363.1| putative dTDP-4-dehydrorhamnose reductase [Croceibacter atlanticus HTCC2559] gi|83849111|gb|EAP86980.1| putative dTDP-4-dehydrorhamnose reductase [Croceibacter atlanticus HTCC2559] Length = 288 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 97/298 (32%), Positives = 161/298 (54%), Gaps = 18/298 (6%) Query: 1 MK------CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPD 52 MK LV G NGQ+ + ++ ++ +D+ + + D Sbjct: 1 MKSSKANTILVTGANGQLGTCIKAIANNYPSCNVVFEDSSSLDITNRNQVVQYMSNSQFD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 IIN AAYTAVD AED E AF INA+ + A +++STD+VFDG P Sbjct: 61 YIINCAAYTAVDLAEDNKEKAFEINAKAVENLTIACKRFSSTLLHVSTDFVFDGKKNAPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T+PLN YG SKL GE+ + + YVI+RT+W++S FG+NF+ +M+RL +E++E+ Sbjct: 121 LERDSTHPLNYYGASKLNGEQIIQQALSKYVIIRTSWLFSEFGNNFVKTMVRLGQEKKEL 180 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 S+V DQ+G+PT A+ +A ++ S ++ G++H + G +W +FA IF Sbjct: 181 SIVADQYGSPTYAIDLAHILLTFIA-----SSSTSYGLYHFSNH-GATTWYNFAAEIF-- 232 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + ++++ +KQ+ ++A RP YS L+ K+ T N+ I W+ ++ ++ + Sbjct: 233 --KLQNQDIRLHKTTSKQFASRAIRPKYSVLETKKVKETLNVEIRNWQSALKEMISRL 288 >gi|332361921|gb|EGJ39723.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK49] Length = 284 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M L+K + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLSKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|152985433|ref|YP_001351218.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PA7] gi|150960591|gb|ABR82616.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PA7] Length = 302 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFARTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L ++D T G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDADLATRASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LKTEPQRVLPITTADYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|332361561|gb|EGJ39365.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1056] Length = 284 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSCFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|260162573|dbj|BAI43814.1| dTDP-4-dehydrorhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 MK L+IG NGQ+ L +++ V ++ DL A PDV++N Sbjct: 1 MKILLIGKNGQVGWELQRSLSTLGDVVAVDYFDKELCGDLTNLDGIAQTVRIVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E++ +N +G +A + +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESERELSDLLNDKGVAVLAAESAKLGALMVHYSTDYVFDGAGSHYRREDE 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E+ +S++ Sbjct: 121 ATGPLNVYGETKRAGELALEQGNPRHLIFRTSWVYATRGANFAKTMLRLAGEKETLSIID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + D +L G +H+ A G SW D+A Y+F + Sbjct: 181 DQHGAPTGAELLADCTATAIRETL--RDPALAGTYHLVA-SGETSWCDYARYVFEVARAH 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V I T YPT A RP S L K + + W++GV ++ + Sbjct: 238 GAELAVQEVKGIPTTAYPTPAKRPLNSRLSNEKFQQAFGVTLPDWRQGVARVVTEV 293 >gi|220935511|ref|YP_002514410.1| dTDP-4-dehydrorhamnose reductase [Thioalkalivibrio sp. HL-EbGR7] gi|219996821|gb|ACL73423.1| dTDP-4-dehydrorhamnose reductase [Thioalkalivibrio sp. HL-EbGR7] Length = 298 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 115/283 (40%), Positives = 156/283 (55%), Gaps = 11/283 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G GQ+ +L + + VE++ + R +D+ F P +IN AAYT Sbjct: 14 RVLLSGAAGQVGVALRDLMPEGVELLALERSTLDISDADRVTETVAHFRPHWVINAAAYT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EP++AF+IN +GA +A+AA S+ ++ISTDYVFDG P NP+ Sbjct: 74 AVDKAEHEPDLAFAINRDGAANLARAAQSVRARMVHISTDYVFDGRKSCPYTPDDLPNPI 133 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SKLAGE +N +ILRTAWVY+ G NFL +MLRL +ER E+ VV DQ G Sbjct: 134 NVYGESKLAGEIATRDILGDNLLILRTAWVYAPHGRNFLTTMLRLLQERDELRVVEDQVG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 TPT A +A I++ L G +H T D G SW DFA I + G Sbjct: 194 TPTHAASLAEVILRSISQ-------DLTGTYHWT-DAGVASWYDFAIAIQEMAISTGLDV 245 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V I T+ YPT A RPAY+ LD S + + W+ Sbjct: 246 ATCRVSPIPTRDYPTPASRPAYTVLDKSAIRERLGHHGTHWRA 288 >gi|191638938|ref|YP_001988104.1| RmlD [Lactobacillus casei BL23] gi|190713240|emb|CAQ67246.1| RmlD [Lactobacillus casei BL23] gi|327382986|gb|AEA54462.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei LC2W] gi|327386174|gb|AEA57648.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei BD-II] Length = 280 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDKKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKLA------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP +S LD SK T +I TW++ ++ L I Sbjct: 228 KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFLQVI 278 >gi|307293849|ref|ZP_07573693.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] gi|306880000|gb|EFN11217.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] Length = 285 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 160/292 (54%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G GQ+ +SL++ V ++ + R +D+ + PD++ N AAY Sbjct: 1 MKAVIVGAGGQLGRSLAAHAPSGVTLVALDRAGLDIADEAAVRNRIDKERPDLLFNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A INA G +A AA ++G I++STD+VFDG S +P +PTNP Sbjct: 61 TAVDKAETDEAAARMINARAVGLLADAAQAVGSSFIHVSTDFVFDGKSGSPYLSDAPTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++KL GE + +I+RTAWVY+ G NF+ +MLRL ER E+ VV DQ G Sbjct: 121 LGVYGRTKLEGE---RLAGSTALIVRTAWVYAPQGGNFVRTMLRLMAERPEVRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A A+ +A N + GI H T D G SW DFA I E+ G Sbjct: 178 TPTYAPALASALWHLAQNRV-------FGIHHYT-DAGAASWYDFAVAIQEEALTLGLLQ 229 Query: 241 SKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T ++PT A RP+YS LD W+E +R +L I Sbjct: 230 TAVPIIPIGTDEFPTPARRPSYSVLDKRSTYTHLGKPAPHWRENLRLMLKEI 281 >gi|294624436|ref|ZP_06703124.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665242|ref|ZP_06730539.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292601259|gb|EFF45308.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604993|gb|EFF48347.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 153/302 (50%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LVIG +GQ+ L + ++ R IDL + Sbjct: 1 MTTLVIGASGQVGTELLRVLAPLGTVVAASRSGQLADGLSCERIDLNELASLDLALNRVR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD+AE E + AF NAE G IA+ +P ++ STDYVFDG Sbjct: 61 PALVVNAAAYTAVDRAEQERDAAFRANAEAPGVIAQWCARADVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYLPDDATAPLGVYGQSKLAGERAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA G++H+TA G +W FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADITAHALRQ-----PGEPSGLWHLTA-AGQTTWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ +L Sbjct: 235 AQARARGLLARTPRVEAIGTADYPTPAKRPAYSRLDTHSLQDTFGVRLPDWQDGLSQVLD 294 Query: 289 NI 290 + Sbjct: 295 TL 296 >gi|254243957|ref|ZP_04937279.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 2192] gi|126197335|gb|EAZ61398.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 2192] Length = 302 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPITTEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|319788850|ref|YP_004090165.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] gi|315450717|gb|ADU24279.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus albus 7] Length = 304 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 100/313 (31%), Positives = 149/313 (47%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + +E + D +D+ Sbjct: 2 MKVFVTGVNGQLGHDVVNELAARSIEAVGSDITDVYSGAADGSAVTNAEYVKLDITDKNA 61 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYIS 99 + + DV+I+ AA+TAVD AEDE +IN +G IA I +YIS Sbjct: 62 VETVISNSKCDVVIHCAAWTAVDAAEDEENKPKVKAINVDGTQNIADICKKINAKMVYIS 121 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF+G P P+N+YG++KL GE VA+ Y I+R AWV+ G NF Sbjct: 122 TDYVFNGQGTEPWIPDCKDYAPMNVYGQTKLDGELAVANTLEKYFIVRIAWVFGKNGKNF 181 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +M+ + K E+ VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 182 IKTMINVGKTHDEVRVVNDQIGTPTYTFDLARLLVDMI-------ETEKYGYYHATNEGG 234 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ + G +KV + T +Y +KA RP S LD SKL + Sbjct: 235 YISWYDFTKEIYKAA----GMSTKVIPVTTAEYGLSKAARPFNSRLDKSKLVEAGFKPLP 290 Query: 278 TWKEGVRNILVNI 290 TW++ V + + Sbjct: 291 TWQDAVARYVKEL 303 >gi|325696769|gb|EGD38657.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK160] Length = 284 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ + Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKELYKQ 280 >gi|227891405|ref|ZP_04009210.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] gi|227866794|gb|EEJ74215.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus salivarius ATCC 11741] Length = 304 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 108/311 (34%), Positives = 157/311 (50%), Gaps = 34/311 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G GQ+ + + + + +D+ + Sbjct: 1 MKYFVTGVAGQLGHDVMNELNKRGYVGVGTDLAPEYAGIQDDSYVTTAEYVSLDITNNDE 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PDVI++ AA+TAVD AEDE + A +IN +G IA AA I +Y+S Sbjct: 61 VQKIIEMVDPDVIVHCAAWTAVDAAEDEDKQAKVRAINVDGTQNIANAAKKIDAKMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG + P PLN+YG++KL GE VA+ + Y I+R AWV+ + G+NF Sbjct: 121 TDYVFDGQGKKPWKPDCKDYKPLNVYGQTKLDGELAVANTLDKYFIVRIAWVFGVNGANF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML+LA+ E++VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMLKLAENHDELTVVSDQIGTPTYTYDLARLLVDMT-------ETDKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SWADFA+ IF +S G KV + T +Y +KA RP S LD SKL + Sbjct: 234 YISWADFAKEIFKQS----GKNVKVTPVTTAEYGVSKAARPFNSRLDKSKLVENGFDPLP 289 Query: 278 TWKEGVRNILV 288 TW++ + L Sbjct: 290 TWQDALSRYLK 300 >gi|300173012|ref|YP_003772178.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc gasicomitatum LMG 18811] gi|299887391|emb|CBL91359.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc gasicomitatum LMG 18811] Length = 279 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + +++ + +D+ + + F S PDVI++ AA Sbjct: 1 MKFLITGANGQLGQELQKLLRERELDFVAFDSTQLDITSREAVLATFESVKPDVILHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ E+ + +N G +A A IG + +STDYVFDG E P Sbjct: 61 YTKVDLAEDDGREVNWQVNVNGTKNVADAVKKIGAKVVAVSTDYVFDGTQNNDYVETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA ++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLATTHPRLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + + G++H++ + G +W DFA I Sbjct: 181 LGRPTWTRTLAEFMLHLVDV------KATYGVYHLS-NTGTTTWFDFAREILK------N 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + ++P KA+RP +S + K +T I W+E + L+ + Sbjct: 228 TDVEIAPVTSAEFPQKAYRPRHSVMSLDKAEST-GFEILNWREALNAFLMGL 278 >gi|238026394|ref|YP_002910625.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] gi|237875588|gb|ACR27921.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] Length = 301 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 149/292 (51%), Gaps = 9/292 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L+ ++ + R +DL P P +++NPAAYTA Sbjct: 10 ILLTGVNGQVGHELARSLQGLGRVVALDRQALDLADPDAIRRVMRELVPALVVNPAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + A +N + A+ A G ++ STDYV+ G E PT P N Sbjct: 70 VDQAETDVAGATCLNVDAPAVFAEEARRAGAALVHYSTDYVYAGEGEARYAETDPTGPRN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE+ +A+ ++ILRT+WVY + G NFL +MLRL ER E++VV DQ G P Sbjct: 130 VYGRTKLEGEQAIAASGCRHLILRTSWVYGMRGRNFLRTMLRLGAERSELNVVADQIGAP 189 Query: 183 TSALQIARAIIQIAHNLI------ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 T + IA I + ++ + G+FH+ A GG SW FAE IF ++ Sbjct: 190 TWSRTIAELTAAILAQSVSPGVSADDWWAAHSGVFHLAA-GGETSWHGFAEAIFEQAG-- 246 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G V I YPT A RP+ S L KL T + + W+E +R + Sbjct: 247 GERRPAVRPIPAASYPTPAARPSNSRLSMDKLERTFGLTVPHWREALRLCMT 298 >gi|21244307|ref|NP_643889.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas axonopodis pv. citri str. 306] gi|21109958|gb|AAM38425.1| dTDP-4-keto-L-rhamnose reductase [Xanthomonas axonopodis pv. citri str. 306] Length = 299 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 114/302 (37%), Positives = 152/302 (50%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L + I+ R D P + Sbjct: 1 MTTLVLGANGQVGTELLRALAANGPILGSTRSGRLPDGAACEVADFDAPHRLSELLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE G IA+ +P ++ STDYVFDG Sbjct: 61 PSCVVNAAAYTAVDRAEQERDAAFRANAEAPGVIAQWCARADVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA G++H+TA G +W FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADITAHALRQ-----PGEPSGLWHLTA-AGQTTWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ +L Sbjct: 235 AQARARGLLARTPRVEAIGTADYPTPATRPAYSRLDTHSLQDTFGVRLPDWQDGLSQVLD 294 Query: 289 NI 290 + Sbjct: 295 TL 296 >gi|315923822|ref|ZP_07920051.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622855|gb|EFV02807.1| dTDP-4-dehydrorhamnose reductase [Pseudoramibacter alactolyticus ATCC 23263] Length = 298 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 28/306 (9%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSF 49 M+ LV G GQ+ ++ + + + + +D+ A Sbjct: 1 MRFLVTGVGGQLGADVMAELAARGFDAVGTDLAPANEAYDDYRPLDITDEAAVARMIREA 60 Query: 50 SPDVIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +PDV+++ AA+TAVD AE +PE ++NA+G AIAKA + G IY+STDYVFDG Sbjct: 61 APDVVVHCAAWTAVDAAE-DPENIPKVTAVNADGTRAIAKACAAKGCKLIYLSTDYVFDG 119 Query: 107 LSRTPIDEF-SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P + PLN+YG++KLAGE V + + + I+R AWV+ GSNF+ +ML + Sbjct: 120 KGSAPWQPDNTDYAPLNVYGRTKLAGEAAVRALVDRHFIVRIAWVFGQNGSNFIKTMLAV 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + + VV DQ GTPT +AR ++ +A +T G +H T +GG +SW DF Sbjct: 180 GRTHDSVRVVNDQIGTPTYTADLARLLVDMA-------ETEKYGTYHATNEGGYISWCDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A+ I+ ++ G ++V + T +Y + A RP S LD SKL I + W++ + Sbjct: 233 AKEIYRQA----GYATEVIPVTTAEYGASAAARPFNSRLDKSKLIQNGFIPLPDWRDALS 288 Query: 285 NILVNI 290 L + Sbjct: 289 RYLQAL 294 >gi|255534366|ref|YP_003094737.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriaceae bacterium 3519-10] gi|255340562|gb|ACU06675.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriaceae bacterium 3519-10] Length = 286 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 146/289 (50%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSM---CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 K LV+G NGQ+ + E +D+ +F P IN A Sbjct: 3 KILVVGGNGQLGNCFRKIEPDFENQFEFNFTDSETLDITDSSAVEEYFAEHRPHFCINAA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE+EPE F++NAE G +A+A I+ISTDYVF G ++ E T Sbjct: 63 AYTAVDQAENEPEKVFAVNAEAVGNLAEACAEYKTVLIHISTDYVFSGDTQISYSEDGFT 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG SKL GEE +++RT+W+YS F NF+ +ML L ++ E+ +V DQ Sbjct: 123 DPQGVYGASKLKGEELALENNPKTIVIRTSWLYSEFNKNFVKTMLNLFAQKDELGIVNDQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG PT+A +A A+++I + GIFH + + +W F + I AE Sbjct: 183 FGQPTNANDLADAVMRIILT-----EAKTFGIFHFS-NYPETTWFSFTQKI----AELSN 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I T Q+PT A RP S + K+ +T+ I + W+ + + Sbjct: 233 SNIKLNPITTDQFPTPAKRPKRSTMSLDKIESTYRIELQHWENSLEKCI 281 >gi|332366337|gb|EGJ44089.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1059] Length = 284 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT + + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLTEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|88813325|ref|ZP_01128563.1| dTDP-4-dehydrorhamnose reductase [Nitrococcus mobilis Nb-231] gi|88789383|gb|EAR20512.1| dTDP-4-dehydrorhamnose reductase [Nitrococcus mobilis Nb-231] Length = 291 Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 159/292 (54%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ ++L + VE++ GR +D+ +P+ P VI+N AAY Sbjct: 1 MKVLVTGANGQLGRALVRLAPAGVELLAYGRDALDVTQPQSVPRVLAME-PAVIVNAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E A+++N GA +A+AA +G ++ISTD+VFDG P S NP Sbjct: 60 TAVDQAETERAAAYAVNVGGAEHMARAARELGCRLVHISTDFVFDGAQGRPYTPESKPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKLAGE+ + + +ILRTAW+Y GSNF+ SMLRL + R E+ VV DQ G Sbjct: 120 LNVYGASKLAGEQAAQAIKPDALILRTAWLYGETGSNFVHSMLRLMRTRAELHVVDDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 TPT+ +A+ + + + L GI H T D G SW DFA I + G Sbjct: 180 TPTAVAGLAQCVWRAIEGRL------LSGIQHWT-DAGVASWYDFAVAIRQTAMALGLLQ 232 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + YPT A RPA+S LD + + W + + L + Sbjct: 233 RPAAVLPVPSSAYPTPASRPAFSVLDKTATWRALALTPGHWSAALADTLAAV 284 >gi|312868793|ref|ZP_07728984.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus oris PB013-T2-3] gi|311095692|gb|EFQ53945.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus oris PB013-T2-3] Length = 280 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 156/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L + + +E +D+ + F + P+++ + AA+ Sbjct: 3 KILITGANGQLGTELRHLLDEQGIEYSAFDSQSMDITDKATVDARFNTEQPEIVFHCAAF 62 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AEDE ++ +++N G +A+AA G +YISTDYVFDG + +PTN Sbjct: 63 TAVDPAEDEKKDLNWAVNEAGTKNVAEAAQQAGATLVYISTDYVFDGTNEGEYQVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ V + Y I+RT+WV+ +G NF+ +MLRLAK+ ++VV DQ Sbjct: 123 PKNEYGKAKLAGEQLVEQIMDKYYIIRTSWVFGQYGKNFVYTMLRLAKDHDRLTVVADQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + I ++ ++ D G SW +FA I + Sbjct: 183 GRPTWTRTLAEFMLYAVQHQIPFD------LYQLSND-GSCSWYEFASEILKDQ------ 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +++YP KA+RP +S + K+ + I +W++ ++ L + Sbjct: 230 PVEVAPVTSEEYPQKAYRPRHSIMSLDKVKAAGFMPI-SWQDALQEFLKQV 279 >gi|188578645|ref|YP_001915574.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523097|gb|ACD61042.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 302 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 151/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGTELLRALAVDGAVQATTRSGQLPDGSACETADFDAPETLTALLDRIK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE + E A NA G +A S +P ++ STDYVFDG Sbjct: 61 PSRVVNAAAYTAVDRAEQDRERATRANATAPGVVAAWCASNRVPLVHYSTDYVFDGQGAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE+ + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYRENAQTSPLGVYGETKLAGEQAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I + L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADVTAQLLRQRTPDTSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L L I + W+ G++ ++ Sbjct: 236 EEAVSAGLLERAPRVVPITTADYPTPARRPAYSRLSIDTLQGDFGIELPEWRVGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EL 297 >gi|320546615|ref|ZP_08040927.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equinus ATCC 9812] gi|320448670|gb|EFW89401.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equinus ATCC 9812] Length = 284 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 141/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYAKNFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDATEDTTWYDFAVEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLKKAKAT-GFVIPTWQEALKEFYKQ 280 >gi|325133730|gb|EGC56386.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M13399] Length = 287 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG ++P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKSPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ AII++ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|324990948|gb|EGC22883.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK353] gi|325687809|gb|EGD29829.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK72] gi|327469634|gb|EGF15103.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK330] Length = 284 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIVRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|22537570|ref|NP_688421.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 2603V/R] gi|77409562|ref|ZP_00786244.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae COH1] gi|77414848|ref|ZP_00790962.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 515] gi|22534453|gb|AAN00294.1|AE014257_1 dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 2603V/R] gi|77159098|gb|EAO70295.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae 515] gi|77171827|gb|EAO75014.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae COH1] gi|319745372|gb|EFV97683.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae ATCC 13813] Length = 284 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKAA +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLEKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|298290102|ref|YP_003692041.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506] gi|296926613|gb|ADH87422.1| dTDP-4-dehydrorhamnose reductase [Starkeya novella DSM 506] Length = 297 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 108/280 (38%), Positives = 150/280 (53%), Gaps = 4/280 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L++G GQ+ + ++++ VE + + +D+ + + P V+IN AAY Sbjct: 3 RVLLLGAGGQVGREIAALAPGRVESLTALDHAGLDITDASALKAALEQYRPQVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE A INA G IA+A S G I+ISTDYVFDG E P P Sbjct: 63 TAVDKAESEPEKANLINAVAPGLIAQACASHGAGLIHISTDYVFDGTKAGAYVESDPVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE V + ++I+RT+WVY + G+NFL +MLRLA+ R ++VV DQ G Sbjct: 123 LGVYGASKEAGERAVRDSLDRHLIVRTSWVYGVHGANFLKTMLRLAETRDRLTVVADQTG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+ IA ++ A L T G +H+ G +W FA I +A G + Sbjct: 183 CPTATRDIAEGLLTAAMQLATADVT--PGTYHLAG-TGVTTWHGFASVIVAHAARHTGRH 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V I T YPT A RPA S L + A T + W+ Sbjct: 240 VEVAPITTADYPTPARRPANSELSSALFARTVGYEAAPWQ 279 >gi|325269112|ref|ZP_08135732.1| dTDP-4-dehydrorhamnose reductase [Prevotella multiformis DSM 16608] gi|324988499|gb|EGC20462.1| dTDP-4-dehydrorhamnose reductase [Prevotella multiformis DSM 16608] Length = 293 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLS---SMCVQDVEIIRV--GRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + V G +D+ +D + II Sbjct: 1 MNILVTGANGQLGNEIQLVARNSKDNYIFTDVCEGYTKLDITNLEDIRQMVHDHNITCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VDKAE EI ++NA G +AKA + ++ISTDYVF G TP E Sbjct: 61 NCAAWTNVDKAETAGEIVETLNAVAPGNLAKAMKEVDGLLVHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG SKL GEEK+ + ++ILRTAW+YS FG NF+ +M+ L + + V Sbjct: 121 EMKGTPTGVYGLSKLHGEEKIQATGVKHIILRTAWLYSEFGHNFVKTMMNLTATKPLLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLAETIYDIIENRKYEGS---SGIYHFSNE-GVCSWYDFTIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ + ++P+ RPAYS LD +K+ T ++I W + ++ + ++ Sbjct: 234 LAGNTTCEILPCHSDEFPSPVRRPAYSVLDKTKIKETFGMKIPYWVDSLKKCVESL 289 >gi|322392753|ref|ZP_08066212.1| dTDP-4-dehydrorhamnose reductase [Streptococcus peroris ATCC 700780] gi|321144391|gb|EFX39793.1| dTDP-4-dehydrorhamnose reductase [Streptococcus peroris ATCC 700780] Length = 284 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAEIVEKVFDKVKPTIVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGRKPVGQEWEVDDKP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y +N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHETLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLADNRKE------FGYYHLSNDATEDTTWYDFAIEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TWK+ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLVKAKAT-GFVIPTWKDALKEFYKQ 280 >gi|322420910|ref|YP_004200133.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18] gi|320127297|gb|ADW14857.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M18] Length = 277 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 102/285 (35%), Positives = 147/285 (51%), Gaps = 15/285 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+GN G + Q L ++ V +ID+ L+ P V+IN AAYT Sbjct: 2 ILVVGNKGMLGQDLMALY--GDAARGVDIDEIDITDLTSVQRVLLTLKPKVVINAAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD + PE+A +N+EG G +A + IG + +STDY+FDG P E PL+ Sbjct: 60 VDGCQSNPELAMQVNSEGVGYLAMISKEIGAKLVQVSTDYIFDGKKGAPYLEDDLAGPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKL GE + N++I+RT W+Y G NF+ +ML+LA E++E++VV DQ G+P Sbjct: 120 VYGESKLGGEMNT-WFNPNHLIVRTQWLYGHGGKNFVETMLKLAAEKKELTVVDDQIGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A AI + D +G +H A+ G VSW FA+ IF + G Sbjct: 179 TWTRDLALAIKALL-------DKGCQGTYH-AANSGFVSWNGFAKEIFRLA----GLDVA 226 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T+Q A RP YS LDC KL W++ + L Sbjct: 227 VLPMTTEQLGRPAPRPLYSTLDCGKLQQETGFVPQPWQDALERYL 271 >gi|25011536|ref|NP_735931.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae NEM316] gi|24413075|emb|CAD47153.1| dTDP-L-rhamnose synthase [Streptococcus agalactiae NEM316] Length = 284 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKAA +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKAAAKHDATFVYISTDYVFDGEKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLEKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|325140090|gb|EGC62619.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis CU385] Length = 287 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFIRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ II++ + +RGI+H VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSATIIRLLQH-----SNPVRGIYHYAGSKS-VSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|117618108|ref|YP_857411.1| dTDP-4-dehydrorhamnose reductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559515|gb|ABK36463.1| dTDP-4-dehydrorhamnose reductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 295 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L I V D KP A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGRITAVDFDSTDYCGDFSKPAGVAETVRQVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +N AIA+ A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNITSVAAIAREAEALGAWLVHYSTDYVFDGSGERPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ A+ + ++I RT+WVY+ G+NF +MLR KER E+SV+ Sbjct: 121 VTAPLNVYGETKLAGEQA-AALCSRHLIFRTSWVYAARGANFAKTMLRFGKERSEMSVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + S + G++H+ A G +W D+A+ +F ++ E Sbjct: 180 DQFGAPTGAELLADCTAHVLR--VAQSRPEVAGLYHLIA-SGTTTWFDYAQLVFAKAREA 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD SK T ++ + W GV +L I Sbjct: 237 GVELAVTQLNAVPTSAFPTPAKRPHNSRLDTSKFQRTFDLVLPDWTVGVERMLTEI 292 >gi|77406977|ref|ZP_00783994.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae H36B] gi|77174418|gb|EAO77270.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae H36B] Length = 284 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGSELRHLLEERTQEYVAVDVAEMDITNAEIVDKVFEEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKAA +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP YG++K GEE V YT+ + +RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 NPKTEYGRTKRMGEELVEKYTSKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLEKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|85713611|ref|ZP_01044601.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] gi|85699515|gb|EAQ37382.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter sp. Nb-311A] Length = 308 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 113/295 (38%), Positives = 165/295 (55%), Gaps = 6/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ +L + + +I R DL P A +F PD+I+NPAAY Sbjct: 1 MRILLTGTGGQVGGALRLLLGKSGTVIAPSRSAFDLSNPDTLAGALDAFRPDLIVNPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE ++AF +NA+ AIA+ + +P I+ STDYVFDG P E SPT P Sbjct: 61 TAVDRAEDERDLAFLVNAKAPAAIAEWSARHRVPLIHFSTDYVFDGSGDKPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ YG SKLAG+ + + ++I RT+WVY+ G+NFL +++RLA ER E+ +V DQ G Sbjct: 121 LSAYGASKLAGDLAIHAAGGPHLIARTSWVYAATGANFLRTIVRLAGEREELRIVADQIG 180 Query: 181 TPTSALQIARAIIQIAH---NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT+A IA A+ +I + + + G+ ++ G SW FA I RG Sbjct: 181 APTTANAIANAVTRIVYPNTSNLSALFARHGGVINLACV-GETSWHGFASAIVTGLKSRG 239 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S + I T +PT+A RP S LD S+L + + TW+E + L ++ Sbjct: 240 MKLSVKTIIPIATTDFPTRARRPGNSRLDLSQLQDRFGLTPPTWQEALSRELDSL 294 >gi|323351866|ref|ZP_08087517.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis VMC66] gi|322121923|gb|EFX93655.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis VMC66] Length = 284 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+R AWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRAAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|313110225|ref|ZP_07796121.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 39016] gi|310882623|gb|EFQ41217.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa 39016] Length = 302 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPITTEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|297569756|ref|YP_003691100.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] gi|296925671|gb|ADH86481.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] Length = 296 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 158/292 (54%), Gaps = 7/292 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G GQ+ L V ++ +GR +DL P + P IIN A+TA Sbjct: 5 LIIFGAEGQVGWELQRSLVLLGPLLPLGRGQVDLADPAAVRAAIRDIDPSAIINAGAFTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E A ++N +A ++GIP ++ STDYV+DG P E P NP + Sbjct: 65 VDLAESEEATARAVNEVAPATMAAETRALGIPLVHFSTDYVYDGDQDGPYLETDPPNPRS 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAG+E +A+ +Y+ILRT+WV++ G NFL ++LRLA ER ++VV DQFG P Sbjct: 125 VYGRSKLAGDEAIAASGADYLILRTSWVFAARGQNFLQTILRLAAERSSLTVVADQFGAP 184 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP--- 239 T+A +A + L + T+ GI+H TA G SW D+A +I E+ + G Sbjct: 185 TAAELLADVTARALPAL--QAGTASGGIYHCTA-AGETSWYDYARFIVGEAGKLGASLQL 241 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T +YP A RPA S LDC +L + + W+ V+ L + Sbjct: 242 GPEQIKPISTAEYPRPAARPANSRLDCRRLEQAFGLTLPPWQFHVKRALKEL 293 >gi|303237033|ref|ZP_07323603.1| dTDP-4-dehydrorhamnose reductase [Prevotella disiens FB035-09AN] gi|302482420|gb|EFL45445.1| dTDP-4-dehydrorhamnose reductase [Prevotella disiens FB035-09AN] Length = 294 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NG + ++ + + + + + +D+ ++ + + II Sbjct: 1 MNILVTGANGMLGNTIQVVAKESKDQYLFTDVCEGYQKLDITNLEEVRRTVKENNIECII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I +NA +AKA + +++STDYVF G TP E Sbjct: 61 NCAAWTNVDGAETAGDIVEMLNATAPENLAKAMKEVDGLLVHVSTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ + Y+I+RTAW+Y FG NF+ +M+ L + E+ V Sbjct: 121 DQKGTPTGVYGLTKLHGEEKIMAVGGKYIIVRTAWLYGEFGKNFVKTMMNLTATKPELKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A+ +A+AI I N +T GI+H + + G SW DFA+ I + Sbjct: 181 VFDQCGTPTYAVDLAKAIFDIVENRKYEENT---GIYHFSNE-GVCSWYDFAKAIAEFA- 235 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS D +K+ T + W + ++ + N+ Sbjct: 236 --GNTSCNIQPCHSNEFPSPVTRPAYSVFDKTKIKTTFGTSVPYWIDSLKKCVANL 289 >gi|312115796|ref|YP_004013392.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC 17100] gi|311220925|gb|ADP72293.1| dTDP-4-dehydrorhamnose reductase [Rhodomicrobium vannielii ATCC 17100] Length = 299 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 3/288 (1%) Query: 3 CLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+ L+ + + + R ++DL + ++ + P IIN YT Sbjct: 6 ILITGGSGQLGLELARLPWPDGLRLRTPDRSELDLSSTESITAYIDACRPLAIINAGGYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE +P AF +NA G AIA+AA G I+ISTDYVFDG DE +PL Sbjct: 66 QVDGAESDPLTAFCLNAMGPAAIAEAARRHGSRLIHISTDYVFDGSRHGFYDESDAVSPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SK AGE+ V + VI+RTAW++S + +NF+ +MLR+ +ER + +V DQFG Sbjct: 126 GVYGASKEAGEQAVRAILPGSVIVRTAWLFSPYRTNFVKTMLRIGRERPSVRIVADQFGC 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+A +ARA+ IA L+E+ + G FH +GG +W A F ++ G Sbjct: 186 PTAASDLARALQTIAMRLVEDP-AAPTGTFHFV-NGGEATWYALACEAFAQATRYGYTAP 243 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I T +YPT A RPA S L ++L ++ I WK V + + Sbjct: 244 AVAPISTAEYPTPARRPANSRLSVARLTESYAITPRPWKLAVAETVEH 291 >gi|94311666|ref|YP_584876.1| dTDP-4-dehydrorhamnose reductase [Cupriavidus metallidurans CH34] gi|93355518|gb|ABF09607.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Cupriavidus metallidurans CH34] Length = 306 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 116/295 (39%), Positives = 158/295 (53%), Gaps = 8/295 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G+NGQ+ L ++ + R DL +P S PDVI+NPAAYTA Sbjct: 11 LLVTGSNGQVGFELRRSLAPLGRVVALDRSQFDLTRPDALRELVRSIRPDVIVNPAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE E E AF++N G +A+ A +G ++ STDYVFDG E NP + Sbjct: 71 VDKAETEAEAAFAVNGVAPGVLAEEARRLGSLFVHYSTDYVFDGTKDGAYLEGDAVNPQS 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YGKSKLAGE+ VA+ ++LRT WV G NF +MLRLA+ER + V+ DQFG P Sbjct: 131 VYGKSKLAGEQVVAATGAASLVLRTCWVAGAHGGNFAKTMLRLARERDSLRVIADQFGAP 190 Query: 183 TSALQIARAIIQIAHN---LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 T+A IA QI + G++H+ A GG +W +A ++ +A +G Sbjct: 191 TTASLIADVTAQIVARHWLHAPGREAFPTGVYHLAA-GGETTWHGYATHVLSRAAAKGVE 249 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I QYP A RPA S LD KL +T NI + W EG+ +L I Sbjct: 250 MKVDPTRIEPIPASQYPLPAPRPANSRLDTGKLRDTFNIHLPDWAEGIDLLLDQI 304 >gi|295133947|ref|YP_003584623.1| dTDP-4-dehydrorhamnose reductase [Zunongwangia profunda SM-A87] gi|294981962|gb|ADF52427.1| dTDP-4-dehydrorhamnose reductase [Zunongwangia profunda SM-A87] Length = 285 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 103/289 (35%), Positives = 156/289 (53%), Gaps = 11/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+A+ + + +++ ++D+ K + D IN AAY Sbjct: 3 KILVTGGQGQLARCIDKLSKVYELDFSFKSSLELDITKFEALEQELNGQGYDYCINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE E+A IN +A+ + I+ISTD+VF G + P E TNP Sbjct: 63 TQVDKAESNKEVANLINHLAVDLLARLCKKYKVTLIHISTDFVFSGENSLPYLEADKTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGKSKL GE ++ + I+RT+W+YS FG+NFL SML+ +ER +SVV DQ G Sbjct: 123 LGVYGKSKLDGECRIQQNLAQFFIIRTSWLYSEFGNNFLKSMLQYGREREALSVVYDQVG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A+ +A I++I S++ G++H + + G SW DFA IF + Sbjct: 183 TPTYAMDLAGLILKIII-----SESKSYGVYHYSNE-GVASWYDFAFAIFKMA----NMD 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I +++YPT A RP++S LD S++ I+I W++ + + N Sbjct: 233 CDLNPIRSEEYPTAAKRPSFSVLDKSRVKKIFQIKIPHWQQSLSEAIRN 281 >gi|261392875|emb|CAX50456.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase; dTDP-6-deoxy-L-mannose dehydrogenase; dTDP-L-rhamnose synthetase) [Neisseria meningitidis 8013] Length = 287 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|158423456|ref|YP_001524748.1| dTDP-4-dehydrorhamnose reductase [Azorhizobium caulinodans ORS 571] gi|158330345|dbj|BAF87830.1| dTDP-4-dehydrorhamnose reductase [Azorhizobium caulinodans ORS 571] Length = 297 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 165/282 (58%), Gaps = 4/282 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G +GQ+ + L+++ V+ + + + R D+ P A + PDV++N AA Sbjct: 1 MRVLLLGADGQLGRELTALAVERGLALAALNRAATDITDPVAVAKALEAHKPDVVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A +NA G IA+ S G+P I++STDYVFDG E P Sbjct: 61 YTAVDKAESEPDLAAKVNAVAPGLIAERCASAGVPLIHVSTDYVFDGTKTGAYVESDPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AGE + + ++ILRTAWVY I+G+NFL +MLRLAK+R +++V DQ Sbjct: 121 PLGVYGRTKAAGEAAIRAAGEKHLILRTAWVYGIYGNNFLKTMLRLAKDRDRLTIVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+ IA I +A + ++ G +H+ G +W FA+ I +A G Sbjct: 181 GCPTATRDIAEGI--LAAAAPAVAGSARWGTYHL-GGTGVTTWHGFAQAIIDRAATYTGR 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V I T +YPT A RPA S LD S T + R + W++ Sbjct: 238 RPEVAAITTAEYPTPARRPANSELDSSLFERTFHFRAAPWQQ 279 >gi|262374522|ref|ZP_06067796.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205] gi|262310518|gb|EEY91608.1| dTDP-4-dehydrorhamnose reductase [Acinetobacter junii SH205] Length = 302 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 149/301 (49%), Gaps = 12/301 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 MK L++G NGQ+ L E+I + R D+ + PDVI Sbjct: 1 MKILLLGKNGQVGWELQRALQPLGEVIALDRQRSEEGFCGDISNFEAIDFVLQQLQPDVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVDKAE EP A IN++ +A A G I+ STDYVF+G E Sbjct: 61 VNATAYTAVDKAESEPNQAELINSQAVKHLAVQAKKNGALLIHYSTDYVFNGEGENAWKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T P+N+YG++K GE ++ ++ RT WVY+ G NF+ +ML+L + E+++ Sbjct: 121 DDQTAPVNLYGQTKRQGEVELEQSGVAFINFRTCWVYAARGHNFIKTMLKLGHMKEELNI 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLI---ENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + DQ G PT A IA Q+ + L G +H+ A G +W D+A ++F Sbjct: 181 INDQVGVPTGAALIADVTAQVLRYYFLQTAEQKSQLHGHYHL-APKGETTWFDYANFVFD 239 Query: 232 ESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++++G I T+ YPT A RP S L+ KL I + W++GV +L Sbjct: 240 QASKQGQTFVLKSTNPIATEAYPTPAKRPLNSRLNTEKLQQKFKIHLPYWQQGVVQVLEE 299 Query: 290 I 290 I Sbjct: 300 I 300 >gi|322385738|ref|ZP_08059382.1| dTDP-4-dehydrorhamnose reductase [Streptococcus cristatus ATCC 51100] gi|321270476|gb|EFX53392.1| dTDP-4-dehydrorhamnose reductase [Streptococcus cristatus ATCC 51100] Length = 284 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVIGTENVAKAAEAHGATMVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDASEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|116495475|ref|YP_807209.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei ATCC 334] gi|116105625|gb|ABJ70767.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus casei ATCC 334] Length = 280 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ L + +D+ D+D+ K +F + PD+I + AA Sbjct: 1 MKILITGAQGQLGTELRHLLDSRDIAYRGTDAHDLDITDEKAVDQYFKDYQPDLIYHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVDKAEDE + +N +G +AKAA +I +YISTDYVFDG + Sbjct: 61 YTAVDKAEDEGKALNQKVNVDGTRILAKAAAAIDATLVYISTDYVFDGDRKDIYTVDDQP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P N YG++K GE++V Y Y I+RT+WV+ +G NF+ +ML LAK +E++VV DQ Sbjct: 121 APRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVFGEYGHNFVYTMLDLAKTHKELTVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G P+ +A + + GI+H++ D +W +FA I + Sbjct: 181 YGRPSWTKNLAEFMTFAVDQKLA------YGIYHLSNDNS-CNWYEFASAILAD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + +YP KA RP +S LD SK T +I TW++ ++ L I Sbjct: 228 KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT-GFKIETWQDALKEFLQVI 278 >gi|325928552|ref|ZP_08189740.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] gi|325541091|gb|EGD12645.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas perforans 91-118] Length = 299 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 152/302 (50%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M LV+G NGQ+ L + I+ R D P+ + Sbjct: 1 MTTLVLGANGQVGTELLRALAANGPILSSTRSGRLPDGAACEVADFDAPQRLSELLDRLQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE IA+ +P ++ STDYVFDG Sbjct: 61 PSCVVNAAAYTAVDRAEQERDAAFRANAEAPSVIAQWCARASVPLVHYSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA G++H+TA G +W FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADITAHALRQ-----PGEPSGLWHLTA-AGQTTWHGFAEAIF 234 Query: 231 WESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ RG +V I T YPT A RPAYS LD L +T +R+ W++G+ +L Sbjct: 235 AQARARGLLAHAPRVEAISTADYPTPATRPAYSRLDIHSLQDTFGVRLPDWQDGLSQVLD 294 Query: 289 NI 290 + Sbjct: 295 TL 296 >gi|293364793|ref|ZP_06611510.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|307703042|ref|ZP_07639989.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|291316243|gb|EFE56679.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] gi|307623435|gb|EFO02425.1| dTDP-4-dehydrorhamnose reductase [Streptococcus oralis ATCC 35037] Length = 284 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +V+ + V ++D+ + F +P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNVDYVAVDVVEMDITNAEMVEKVFAEVNPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG R + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVRQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 SPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------YGYYHLSNDSTEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVVPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|125717701|ref|YP_001034834.1| dTDP-L-rhamnose synthase [Streptococcus sanguinis SK36] gi|125497618|gb|ABN44284.1| DTDP-L-rhamnose synthase, putative [Streptococcus sanguinis SK36] Length = 284 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 150/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNTQVVDNVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTYKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT + +I +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLTEFMIHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|15600355|ref|NP_253849.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAO1] gi|9951464|gb|AAG08547.1|AE004929_2 dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAO1] gi|27262964|emb|CAC82200.1| dTDP-4-keto-L-rhamnose reductase [Pseudomonas aeruginosa] Length = 302 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 156/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L + + + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLCWDVELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|294635548|ref|ZP_06714028.1| dTDP-4-dehydrorhamnose reductase [Edwardsiella tarda ATCC 23685] gi|291091117|gb|EFE23678.1| dTDP-4-dehydrorhamnose reductase [Edwardsiella tarda ATCC 23685] Length = 296 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 109/296 (36%), Positives = 158/296 (53%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L ++ + D P A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRSLAPLGKVTAIDFDSTDYCGDFSNPNGVAETVRRLKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+ +G ++ STDYVFDG E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVVAIAKEAELLGAWLVHYSTDYVFDGSGEKSWVEAD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE A + ++I RT+WVY+ G+NF +MLRL +E +EISV+ Sbjct: 121 LTAPLNVYGETKLAGELG-AKLCSRHLIFRTSWVYAARGTNFAKTMLRLGQEHQEISVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A I S ++ G++H+ A G +W D+A+ +F ++ + Sbjct: 180 DQFGAPTGAELLADCTAHAIR--IAQSKPTVSGLYHLIA-SGTTTWFDYAQLVFAKARKA 236 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + +V + + +PT A RP S LD +K T N+ + W+ GV +L + Sbjct: 237 GIDLTVRQVRAVPSSAFPTPAKRPHNSRLDTTKFQQTFNLVLPDWQIGVERMLDEL 292 >gi|89098351|ref|ZP_01171235.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] gi|89086900|gb|EAR66017.1| spore coat polysaccharide synthesis [Bacillus sp. NRRL B-14911] Length = 283 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 147/290 (50%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+ + L++ + ++ R + D+ A +P+V+IN AA Sbjct: 1 MKIAITGAGGQLGRELTTSLARLGCSVLPFSRDEWDITDAYSTAERMKEVAPEVLINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD E + E AF INA +A+ A + I+ISTDYVF G P +E P Sbjct: 61 FTAVDLCETQREEAFLINAIAPFYLAREAKRLQARFIHISTDYVFSGDQSVPWEEQDPPF 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN YG+SK AGE + + +I+RT+W+Y G NF+ ++ RL + ++ VV DQ Sbjct: 121 PLNAYGESKRAGETLAMAANPDTLIIRTSWLYGHGGKNFVNTIARLLQTESKLEVVSDQM 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A A+ + GI+H++ +GG SW +FA+ I A Sbjct: 181 GSPTYAKDLAEAVYFLLEQA--------PGIYHVS-NGGSCSWFEFAKEI----AVFLKS 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ + T+ Y A RP YS L+ KL + WK+ + + L Sbjct: 228 GAEIEPVSTEAYGLPARRPPYSVLNNKKLNGCGFF-MRNWKDALYDYLAK 276 >gi|76787170|ref|YP_330067.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae A909] gi|77412514|ref|ZP_00788812.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae CJB111] gi|76562227|gb|ABA44811.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae A909] gi|77161428|gb|EAO72441.1| dTDP-4-dehydrorhamnose reductase [Streptococcus agalactiae CJB111] Length = 284 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGSELRHLLDERTQEYVAVDVAEMDITNAEMVDKVFEEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ F+IN G +AKAA +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKAAAKHDATLVYISTDYVFDGEKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y + + +RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPKTEYGRTKRMGEELVEKYASKFYTIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAENQKD------FGYYHLSNDAKEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + K T I TW++ ++ Sbjct: 232 --DVEVKPVDSSQFPAKAKRPLNSTMSLEKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|299137001|ref|ZP_07030184.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX8] gi|298601516|gb|EFI57671.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX8] Length = 310 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 154/300 (51%), Gaps = 15/300 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG NGQ+ L M ++ V R ++DL + P I+N AAYTA Sbjct: 6 ILLIGANGQVGSELLPMLNALGHVVAVTRAELDLTDAAAIRAMVRQVKPRWIVNAAAYTA 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE + AF+IN + G + + A IG ++ STDYVF G P E P NPL Sbjct: 66 VDKAESDIPTAFAINGDAPGVLGEEAARIGAAVLHFSTDYVFAGDGTRPWREDDPVNPLG 125 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE +A+ ++ RT+WV+ G NFLL++L+ A+ER E+ +V DQ+G P Sbjct: 126 VYGASKLAGERALAASGAAHLTFRTSWVFGARGKNFLLTILKFAREREELRIVDDQYGAP 185 Query: 183 TSALQIARAIIQIAHNLIENSDT----------SLRGIFHMTADGGPVSWADFAEYIFWE 232 T + +AR +++ T L GI+H + G +W FA F Sbjct: 186 TWSRTLARLATHAILRGEKDAATQGGTLVEAMQPLSGIYHACS-AGCTTWFGFASE-FVG 243 Query: 233 SAERGGPY---SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 A+ P +++ + + YPT A RP S ++C KLA+T + TW++ ++ Sbjct: 244 LAQLAHPEQAFARLAPVSSDAYPTPAKRPQNSRMNCEKLAHTLEFELPTWQDSTAEVMAE 303 >gi|83645210|ref|YP_433645.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396] gi|83633253|gb|ABC29220.1| dTDP-4-dehydrorhamnose reductase [Hahella chejuensis KCTC 2396] Length = 303 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 104/298 (34%), Positives = 156/298 (52%), Gaps = 9/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +V G GQ+ L+ + +GR DL P + PDVI+N AAY Sbjct: 1 MEIMVTGATGQLGWELARSLSMLGRVRALGRNQCDLNDPGSLRAVVRDIKPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A +N++ +A+ A + G ++ STDYVF+G P E P P Sbjct: 61 TAVDKAESDRGGAMRVNSDSVAVLAEEAKNCGALFVHYSTDYVFNGEKGAPYVEVDPVCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL+GE + NY+I RT+WVY+ G NFLL+ML LA+ + +SVV DQ G Sbjct: 121 INTYGYSKLSGENLIRQVDGNYLIFRTSWVYASRGKNFLLTMLNLAQTKEVLSVVSDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIE--NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A +A+ + + I ++++ GI+++ A G SW FA Y+ E + G Sbjct: 181 APTWARDLAQMTLLSVYKSIHAIHNNSFKSGIYNL-ASSGETSWHGFASYLIEEFKSQSG 239 Query: 239 ------PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + ++ + Y T A RPAYS LD +K + + + WK+ R + +I Sbjct: 240 GGAGQVLVKDINKVTSDFYKTDATRPAYSKLDATKFEDEFQVFMPDWKDSCRLCIADI 297 >gi|145298429|ref|YP_001141270.1| dTDP-4-dehydrorhamnose reductase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851201|gb|ABO89522.1| dTDP-4-dehydrorhamnose reductase [Aeromonas salmonicida subsp. salmonicida A449] Length = 295 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 155/296 (52%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L I V D P A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGSITAVDFDSSDYCGDFSNPAGVAETVRLVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVAAIAKEAEALGAWLVHYSTDYVFDGRGERPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ A ++I RT+WVY+ G+NF +MLR KER E+S++ Sbjct: 121 ATAPLNVYGETKLAGEQG-AVLCARHLIFRTSWVYAARGANFAKTMLRFGKERSEMSIIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + S + G++H+ A G +W D+A +F ++ E Sbjct: 180 DQFGAPTGAELLADCTAHAIR--VAQSKPDVAGLYHLIA-SGTTTWFDYARLVFAKAREA 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD SK T N+ + W GV +L I Sbjct: 237 GVELAVTQLNAVPTSAFPTPAKRPHNSRLDTSKFQRTFNLVLPDWTVGVERMLTEI 292 >gi|264678896|ref|YP_003278803.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262209409|gb|ACY33507.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 301 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 16/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDIGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKEGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHMSAHDGDG--GLYHLVA-AGETNWHAYASHVIE 237 Query: 232 ESA----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + T +PT A RP S LD KL + + W++GV +L Sbjct: 238 RAQSLRPDLDSKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQAAMQLHLPAWQQGVERML 297 Query: 288 VNI 290 I Sbjct: 298 REI 300 >gi|332362796|gb|EGJ40590.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK355] Length = 284 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNAQMVDKVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTHNTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|288905578|ref|YP_003430800.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus UCN34] gi|306831668|ref|ZP_07464825.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978606|ref|YP_004288322.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732304|emb|CBI13873.1| Putative dTDP-4-keto-L-rhamnose reductase [Streptococcus gallolyticus UCN34] gi|304426093|gb|EFM29208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178534|emb|CBZ48578.1| rmlD [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 284 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V YT+ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|283795742|ref|ZP_06344895.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] gi|291076680|gb|EFE14044.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. M62/1] Length = 304 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 147/312 (47%), Gaps = 34/312 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKFFVTGVNGQLGHDVMNELNKRGHEGVGSDIAGSYAGIADGSAVTSMPYVGLDITDKEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 PD +I+ AA+TAVD AED+ E ++NA G IA+A +I +Y+S Sbjct: 61 VLKVISEIKPDAVIHCAAWTAVDMAEDDDKVEKVRAVNAGGTQNIAEACKAIDCKMLYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFD P PLN+YG++KL GE VA+ Y I+R AWV+ + G NF Sbjct: 121 TDYVFDVQGTEPWQPDCKDYKPLNVYGQTKLEGELAVANTLEKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +M+ + K E+ VV DQ GTPT +AR ++ + +T G +H T +GG Sbjct: 181 IKTMINVGKTHDEVRVVNDQIGTPTYCFDLARLLVDMC-------ETEKYGYYHATNEGG 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + + G +KV + T +Y +KA RP S LD SKL + Sbjct: 234 YISWYDFCCEFYKQY----GLKTKVTPVTTAEYGLSKAARPFNSRLDKSKLVENGFQPLP 289 Query: 278 TWKEGVRNILVN 289 TW++ V L Sbjct: 290 TWQDSVSRYLKE 301 >gi|171779806|ref|ZP_02920762.1| hypothetical protein STRINF_01643 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281908|gb|EDT47342.1| hypothetical protein STRINF_01643 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 284 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 140/292 (47%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYAEKFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDADEDTTWYDFAVEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLKKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|241662192|ref|YP_002980552.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D] gi|240864219|gb|ACS61880.1| dTDP-4-dehydrorhamnose reductase [Ralstonia pickettii 12D] Length = 305 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 107/294 (36%), Positives = 160/294 (54%), Gaps = 7/294 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+IG NGQ+ L ++ +GR D DL +P +F PDV+IN AAYTA Sbjct: 11 ILLIGKNGQVGFELRRSLAPLGRVVALGRADCDLTQPDQLRQAVRAFQPDVVINAAAYTA 70 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE EP+ A ++N G +A+ + G ++ S+DYVFDG P E NP + Sbjct: 71 VDNAETEPDAALAVNGVAPGVLAEMVRTNGGLLVHYSSDYVFDGAKDCPYLETDVPNPQS 130 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++KL GE +A+ N ++LRT+WV G NF+ ++LR A+ER+ + V+ DQ G P Sbjct: 131 VYGRTKLEGERAIAASGANALVLRTSWVAGAHGDNFVKAILRQARERKHLRVIADQLGAP 190 Query: 183 TSALQIARAIIQIA--HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TSA IA QI H + D + G++H+ A G +W +A + +A R Sbjct: 191 TSASLIADVTAQIVARHWVYGERDALMPGVYHLAA-AGQTTWHGYASEVLRYAAGRCVDL 249 Query: 241 SK----VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I ++ ++A RPA SCLD SKL T + + W+EG++ +L I Sbjct: 250 KAAVAGIEAIPAVKWHSRASRPANSCLDTSKLRETFGVHLPNWQEGIQCLLEQI 303 >gi|15615927|ref|NP_244231.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Bacillus halodurans C-125] gi|10175988|dbj|BAB07084.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Bacillus halodurans C-125] Length = 283 Score = 305 bits (783), Expect = 3e-81, Method: Composition-based stats. Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 12/287 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ LS Q ++ + + ++++L + +PD II+ AA+TA Sbjct: 4 LLITGANGQVGMELSKQGKQHFQVTALTKQELNILDRNTVMNKIKGVNPDWIIHVAAFTA 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+ EDE A+ +N GA +A+AA G IYISTDYVFDG +P + NPLN Sbjct: 64 VDQCEDEQRKAYHVNGLGAANVARAARETGAKLIYISTDYVFDGNKNSPYETCDLPNPLN 123 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SK GE V Y I RT+W+Y +G NF+ +MLRL ++ I VV DQ G P Sbjct: 124 VYGNSKWLGERLVQKYVKTCTIARTSWLYGHYGGNFVKTMLRLLRKGEPIEVVADQVGCP 183 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + + + GI+H++ + G +W +FA I + G S Sbjct: 184 TYVNDLVYYLFALMEK--------PSGIYHIS-NRGSCNWFEFARAI---AKNAGYDPSL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + TK + KA RP YS + +L W+ ++ + Sbjct: 232 IRATTTKAFAAKARRPKYSVMSHQQLELAGLQPPREWELALKEFIQE 278 >gi|107104263|ref|ZP_01368181.1| hypothetical protein PaerPA_01005337 [Pseudomonas aeruginosa PACS2] gi|218894262|ref|YP_002443132.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa LESB58] gi|218774491|emb|CAW30308.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa LESB58] Length = 302 Score = 305 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAGCGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L + + + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDVELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|329116419|ref|ZP_08245136.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parauberis NCFD 2020] gi|326906824|gb|EGE53738.1| dTDP-4-dehydrorhamnose reductase [Streptococcus parauberis NCFD 2020] Length = 283 Score = 305 bits (782), Expect = 4e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + E + V ++D+ P+ F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERNEEYVAVDVAEMDITNPEKVEEVFSQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE ++ IN +G IAKA + +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKKLNQLINVDGTENIAKACGNHNATLVYISTDYVFDGQKPVGEEWLETDVP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y + + I+RTAWV+ +G NF+ +M LAK+ +++VV DQ Sbjct: 122 DPKTEYGRTKRLGEEAVEKYADKFYIIRTAWVFGNYGKNFVFTMQELAKKHPKLTVVDDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLAEN------NKNFGYYHLSNDAKEDTTWYDFAKEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW++ ++ Sbjct: 232 --NVEVTPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|306833809|ref|ZP_07466934.1| dTDP-4-dehydrorhamnose reductase [Streptococcus bovis ATCC 700338] gi|304424003|gb|EFM27144.1| dTDP-4-dehydrorhamnose reductase [Streptococcus bovis ATCC 700338] Length = 284 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE E+ ++IN G +AKAA G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V YT+ + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYTDRFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDTDVV- 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 235 -----VKPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|48474160|dbj|BAD22631.1| dTDP-rhamnose synthase [Streptococcus oralis] Length = 284 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +V+ + V ++D+ + F +P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNVDYVAVDVAEMDITNAEMVEKVFAEVNPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 GPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTDNQKE------YGYYHLSNDSTEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K A T I TW++ ++ Sbjct: 232 --DVEVIPVDSSKFPAKAKRPLNSTMSLAK-AKTTGFVIPTWQDALKEFYKQ 280 >gi|320535549|ref|ZP_08035649.1| dTDP-4-dehydrorhamnose reductase [Treponema phagedenis F0421] gi|320147610|gb|EFW39126.1| dTDP-4-dehydrorhamnose reductase [Treponema phagedenis F0421] Length = 289 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 108/295 (36%), Positives = 158/295 (53%), Gaps = 15/295 (5%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASF----FLSFSPDVIINP 57 +IG+ G +A ++ + Q++ I R + D+ K +F F IIN Sbjct: 2 IWLIGSKGMLASEVAVLLDKQNLPWIGSDR-ETDITDKKSLENFYKNNFSDTECAWIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAEDE + A INAE I + A I+ISTDYVFDG S P E Sbjct: 61 AAYTAVDKAEDEFKQAECINAEALIHICEIAKKHNAKLIHISTDYVFDGASAIPYTENDE 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NP ++YGK+KL GE+ + + Y I+RTAW+Y G NF+ +MLRL ER +++VV D Sbjct: 121 PNPQSVYGKTKLQGEQNIKKILHEYYIIRTAWLYGKNGQNFVSTMLRLMNERNKLTVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A+ +A+ I+ I I G++H + + G +SW DFA I+ + Sbjct: 181 QRGSPTYAVDLAQVIVSIIQKQI------PTGVYHYSNE-GNISWYDFACEIYTQGKHLN 233 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++P KA RP+YS LD +K+ I + WKE ++N L + Sbjct: 234 VIHNDCDIVPCTSSEFPQKAKRPSYSLLDKTKIKTALQIMVPDWKESLKNYLKEL 288 >gi|255033861|ref|YP_003084482.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] gi|254946617|gb|ACT91317.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] Length = 288 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 160/292 (54%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDI-DLLKPKDFASFFLSFSPDVIINPA 58 MK +V+G +GQ+ L + + ++ I + ++L + P +IN A Sbjct: 1 MKIVVLGASGQLGSCLKKVSTERNLTDISFPSEEFANILDKDLLDQLLATEKPQFVINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAED+ + +N +GA IA+ G +++STD+VF G + E P Sbjct: 61 AYTAVDKAEDDVDTCRKVNRDGAAYIAEVCRKHGAALVHVSTDFVFKGNVPKLLSETDPA 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P NIYG +KL GE +A+ + +RT+W+YS FG+NF+ +MLRL +ER ++ V+ DQ Sbjct: 121 EPENIYGLTKLEGEAAIAAILPEHYTIRTSWLYSEFGNNFVKTMLRLGREREQLGVIVDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A+ +A I+ I S + GI+H + + G SW DFA+ +F S Sbjct: 181 VGSPTYAIDLATTILDIIE-----SGNTSYGIYHYSNE-GVTSWYDFAKAVFDLSE---- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ + T +Y T+A RPAYS +D SK+ +T I I W++ + + + Sbjct: 231 TSVKLNPVKTSEYVTRAVRPAYSVMDKSKIKSTFGISIPYWRDSLSICVDRL 282 >gi|297199643|ref|ZP_06917040.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sviceus ATCC 29083] gi|197713429|gb|EDY57463.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sviceus ATCC 29083] Length = 298 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 8/289 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G G + Q + + Q E + + R +DL ++ P V++N AA+T Sbjct: 7 WLVTGAGGMLGQDVLARLAQSGERFVALDRKALDLTDADAVSAALEEHRPAVVVNCAAWT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + A +IN +G +A+A G +++STDYVF G ++ P E +PT P Sbjct: 67 AVDDAETREDEALAINGDGPRNLAEACARTGAVLLHVSTDYVFAGDAQEPYAEDAPTAPR 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG++KLAGE+ V YV+ RTAW+Y G NF+ +M++L + + VV DQ G Sbjct: 127 SAYGRTKLAGEKAVLGIERGYVV-RTAWLYGTGGPNFVKTMIKLEGVKDTLDVVDDQRGQ 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A ++++ L + T+ G++H T + G +W F + IF G Sbjct: 186 PTWSADLAGLLVEL--GLGALAGTAPAGVYHGT-NSGETTWHGFTQEIFRL---LGADPD 239 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V ++ + A RPAYS L + A + W+ + I Sbjct: 240 RVRPTTSEAFVRPAPRPAYSVLGHGRFAEAGIEPLRDWRTALTEAFPEI 288 >gi|46445759|ref|YP_007124.1| putative dTDP-4-keto-L-rhamnose reductase, (TDP-rhamnose synthetase), rfbD [Candidatus Protochlamydia amoebophila UWE25] gi|46399400|emb|CAF22849.1| putative dTDP-4-keto-L-rhamnose reductase, (TDP-rhamnose synthetase), rfbD [Candidatus Protochlamydia amoebophila UWE25] Length = 294 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 143/290 (49%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G +G + + + + + ID+ + F + IIN AAY Sbjct: 3 KIWVCGASGMLGSHFKRLLNKRQLSFVANDDKKIDITNLEAVLDFVRTEQITHIINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE + + A+ +NA G + AA I+ STDYVFDG P E P Sbjct: 63 TKVDKAETDLKQAYLVNACGPHHLGIAARHQNAHVIHFSTDYVFDGKENLPYTEEHACAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG SKLAGE K+ + ++RT+W++ + G NF+ +MLRL E+ +I +VCDQ G Sbjct: 123 IGAYGISKLAGEIKLLDEFDRSCVIRTSWLFGLPGKNFVETMLRLMNEKAQIKIVCDQMG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE--RGG 238 PT A +A +Q GI+H A+ +W +FA+ I+ + E Sbjct: 183 RPTYAQDLAEVALQFL---------DKSGIYHF-ANSSETNWYEFAKEIYRQGKEFQLIQ 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ I T +YPT+A RPAYS L+ K+ + + W+E +++ L Sbjct: 233 RDCQIEPIMTHEYPTQAKRPAYSTLNTQKIESVLRWKPRPWQEALKDYLT 282 >gi|324993209|gb|EGC25129.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK405] gi|324995489|gb|EGC27401.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK678] gi|327461478|gb|EGF07809.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sanguinis SK1] Length = 284 Score = 305 bits (782), Expect = 5e-81, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNTQVVDNVFAEVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G +AKAA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDYAINVTGTENVAKAAEAHGATLVYISTDYVFDGQKPVGEEWEVDDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y++ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVEKYSSRFYIIRTAWVFGNYGKNFVFTMQNLAKTYKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT + + +A N E G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLTEFMTHLAENQKE------FGYYHLSNDAAEDTTWYDFAVEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVQPVDSSKFPAKAKRPFNSTMSLTKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|254238138|ref|ZP_04931461.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa C3719] gi|126170069|gb|EAZ55580.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa C3719] Length = 302 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I R++WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRSSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|134294920|ref|YP_001118655.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134138077|gb|ABO53820.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 294 Score = 305 bits (781), Expect = 5e-81, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 142/291 (48%), Gaps = 7/291 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+ L ++ R +DL + + P I+NPAAYTA Sbjct: 7 ILVTGVTGQVGFELLRSLQGLGRVVACDRSMLDLSDLDRIRAVVRALEPAFIVNPAAYTA 66 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AED+ + A INA+ +A+ A G I+ STDYVFDG E NPLN Sbjct: 67 VDNAEDDVDAARRINADVPRVLAEEAARSGAVLIHYSTDYVFDGAKAGAYTETDAVNPLN 126 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE + + Y+ LRT+WVY G NFL +ML+L ER E+ VV DQ G P Sbjct: 127 VYGTTKLEGERAIENAGCAYLTLRTSWVYGRRGRNFLRTMLKLGAERPELRVVADQVGAP 186 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGGPVSWADFAEYIFWESAERGG 238 T + IA A I + D + G +H++A G SW FA+ I + G Sbjct: 187 TWSKTIAAATAHILSKGLAAHDEAWWQARSGTYHLSA-AGETSWHGFAKAILGIA--MGD 243 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I ++P +A RPA S L KLA T + + W+ + + + Sbjct: 244 DAPAVVPIAASEFPVRASRPANSRLSHGKLAETFGLHLPDWEYALGLCMAD 294 >gi|145219285|ref|YP_001129994.1| dTDP-4-dehydrorhamnose reductase [Prosthecochloris vibrioformis DSM 265] gi|145205449|gb|ABP36492.1| dTDP-4-dehydrorhamnose reductase [Chlorobium phaeovibrioides DSM 265] Length = 286 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 165/291 (56%), Gaps = 9/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M LV G+NGQ+ + L + + ++D+ + S P V+IN A Sbjct: 1 MNILVTGSNGQLGRELQELSRLLPAHRFFFHDLQELDITESSAVMSAVARCQPSVLINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE +PE AF +N GAG +A A G+ +++STDYVF+G TP E Sbjct: 61 AYTAVDRAERDPESAFRVNRNGAGVLASACREAGVLLLHVSTDYVFEGNRPTPYSESDSP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P ++YG+SKL GE+ + +++I+RT+W+YS +G+NF+ +MLRL E+ E+ VV DQ Sbjct: 121 SPSSVYGRSKLQGEQLIGEIDPSHIIVRTSWLYSPYGANFVKTMLRLGAEKSELQVVFDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPTSA +A A+++IA + + R +H + + G SW DFA + S G Sbjct: 181 TGTPTSAADLAGALLEIAGH--HDPSRHYRQTYHYSNE-GTASWYDFACAVMELS----G 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + YP +A RP+YS LD S + IRI W++ + +L N Sbjct: 234 LECRILPVDSSCYPQEAPRPSYSVLDKSAIKRDWGIRIPYWRDSLAAMLSN 284 >gi|312865885|ref|ZP_07726106.1| dTDP-4-dehydrorhamnose reductase [Streptococcus downei F0415] gi|311098289|gb|EFQ56512.1| dTDP-4-dehydrorhamnose reductase [Streptococcus downei F0415] Length = 283 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+ GQ+ L + + + E + V ++D+ F P ++ + AAYT Sbjct: 2 ILITGSKGQLGTELRYLLDERNEEYVAVDVAEMDITDAAKVDEVFAQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ ++IN G IAKAA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKELDYAINVTGTENIAKAAAKYGATLVYISTDYVFDGQKPVGQEWLETDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y ++Y I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYLDHYYIIRTAWVFGNYGKNFVFTMQNLAKTHPRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMTYVTENQ------KNFGYYHLSNDATEDTTWYDFAKEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 232 --DVEVAPVDSSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQEALQEFYKQ 280 >gi|301060716|ref|ZP_07201531.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] gi|300445113|gb|EFK09063.1| dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] Length = 291 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 152/291 (52%), Gaps = 16/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + + +D + VG +D+ K +F + PDV++N AA+ Sbjct: 1 MKILITGGTGQLGRDCEKVLAKDQNVTAVGSSALDVSDRKAVDAFIGNLKPDVVLNCAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 T VD E + E A+ IN G +A AA + G ++ISTDYVFDG P E Sbjct: 61 TRVDDCETQKEPAWKINVVGPKNLATAARASGSRLVHISTDYVFDGRKPIPEYYTESDRP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISVVC 176 +P + YG SKL GE+ VA T+ Y ILRTAW+Y FG NFL +ML+LA +REI VV Sbjct: 121 HPTSYYGFSKLEGEKAVALATDRYTILRTAWLYGAFGRNFLKTMLKLAVGDPQREIKVVH 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG+PT + +A I ++ + G+FH T++ G +W D A+ E Sbjct: 181 DQFGSPTWSYMLAVQIKRVIL-------ADVSGLFHATSE-GYCTWYDLAKTFLHEMEV- 231 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V T+ YPT A RPA S L+ +L + + W+ + + Sbjct: 232 ---PAAVVPCTTRDYPTPAKRPANSILENRRLKDEGLNIMQDWRVDLIQFV 279 >gi|320162333|ref|YP_004175558.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] gi|319996187|dbj|BAJ64958.1| dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] Length = 297 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 150/293 (51%), Gaps = 7/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G+ GQ+ E++ P++D +P+ + P VI+N AAY Sbjct: 1 MRILLLGHGGQVGWECRRTLAPLGEVVTADYPEVDFAQPEGLPALMERVRPQVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE A +NA G +A++A + ++ISTDYVFDG P E NP Sbjct: 61 TAVDRAESEPETARRVNALAPGVLAQSARRLRAALVHISTDYVFDGRKGAPYTEEDIPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG++K GE+ V Y+ILRT+WVYS+ +F+ +L ++++ + VV DQ Sbjct: 121 LSVYGQTKWEGEQAVQEAGGAYLILRTSWVYSLRRESFVSKVLEWSRQKDVLRVVDDQVA 180 Query: 181 TPTSALQIARAIIQIAHNLIENSD-----TSLRGIFHMTADGGPVSWADFAEYIFW-ESA 234 PT A +A+AI + + + D RG++H+ G S +A I + Sbjct: 181 GPTWARMLAQAISAVLAQSLASGDIFDWLEERRGVYHLAGK-GWCSRYQWACEILRLDPH 239 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ T ++PT A RP +S L+ SK T + + W + + + Sbjct: 240 REQQRAREILPARTAEFPTPAVRPLFSALEMSKFERTFGLTLPLWSQALEMAM 292 >gi|91976052|ref|YP_568711.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] gi|91682508|gb|ABE38810.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] Length = 298 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 142/291 (48%), Positives = 182/291 (62%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G GQ+ QSL D++I+ + RP +DL P A + PD +I+ AAY Sbjct: 1 MRLAVTGRVGQVVQSLLERAPADIDIVTIARPAVDLQDPVAVAEAIGAARPDAVISAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A+ IN GAGA+A AA +GIP +++STDYVFDG P E P Sbjct: 61 TAVDLAEKEAELAYRINEAGAGAVATAAADLGIPVVHLSTDYVFDGSLSRPYREDDAPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAGE VA+ ++ ILRTAWVYS FG NF+ +ML LA R E+SVVCDQ G Sbjct: 121 LSVYGASKLAGERAVAAANPDHAILRTAWVYSPFGKNFVRTMLMLADSRAEVSVVCDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT AL IA ++ +A NL+ D +LRG+FHM+ G SWA FAE IF SA GGP Sbjct: 181 APTCALDIADCVVAVARNLLARPSDGALRGVFHMSC-TGETSWAGFAEAIFAHSAAAGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T +YPT A RPA S LD S+LA H IR+ W + + + I Sbjct: 240 SARVKPIATSEYPTPARRPANSRLDTSRLAERHGIRLPNWTDPLAPCIDRI 290 >gi|296392017|ref|ZP_06881492.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAb1] Length = 302 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLIRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|325129930|gb|EGC52731.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis OX99.30304] gi|325132009|gb|EGC54708.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M6190] gi|325136020|gb|EGC58630.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M0579] gi|325137840|gb|EGC60415.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ES14902] gi|325202447|gb|ADY97901.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240149] gi|325207801|gb|ADZ03253.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis NZ-05/33] Length = 287 Score = 305 bits (781), Expect = 6e-81, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 167/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|161869700|ref|YP_001598867.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 053442] gi|161595253|gb|ABX72913.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 053442] Length = 291 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ AII++ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|322374907|ref|ZP_08049421.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C300] gi|321280407|gb|EFX57446.1| dTDP-4-dehydrorhamnose reductase [Streptococcus sp. C300] Length = 284 Score = 304 bits (780), Expect = 7e-81, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + +V+ + V ++D+ K F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERNVDYVAVDVAEMDITNAKMVEKVFAEIKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKA------FGYYHLSNDAAEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I +W++ ++ Sbjct: 232 --DVEVVPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPSWQDALKEFYKQ 280 >gi|116053309|ref|YP_793633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa UCBPP-PA14] gi|115588530|gb|ABJ14545.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa UCBPP-PA14] Length = 302 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 157/295 (53%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G NGQ+ L E++ R DL P+ A + P I+N AYT Sbjct: 3 RILLLGANGQVGWELQRALAPLGELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE + + A INA +A+ A + G ++ STDYVFDG P E +PT PL Sbjct: 63 AVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSAPFAEDAPTGPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG++KL GE+ + + ++I RT+WVY+ G NF +MLRLA +R E+ VV DQFG Sbjct: 123 SVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGA 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR--GIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PTSA IA Q L +++ + R G +H+ A G SW +A ++ ++ ERG Sbjct: 183 PTSAELIADVTAQALQRLRWDAELAARASGTYHLVA-SGETSWHLYARFVIEQALERGWE 241 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ YP A RPA S LD KL + + W+ ++ + Sbjct: 242 LQATPQRVLPIATEDYPVPAKRPANSRLDNHKLQQVFGLVLPDWRYHAGRMIQEL 296 >gi|160945704|ref|ZP_02092930.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii M21/2] gi|158443435|gb|EDP20440.1| hypothetical protein FAEPRAM212_03236 [Faecalibacterium prausnitzii M21/2] gi|295103179|emb|CBL00723.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii SL3/3] Length = 305 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 150/308 (48%), Gaps = 31/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ L + + +I V P++D+ + F Sbjct: 1 MKIIVTGCKGQLGTELLKQLQEGRSELGPIPEKLLNATVIPVDLPELDISNYRMVDEFVR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD+IIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RNRPDIIINCAAYTNVDGCEVHHDDAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIPQDEATLPGPISAYGSTKLMGEKYVERFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAADLAHEILQLCV-------THEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A I S G + V +++Y P A RP +S LD L T + WK+ Sbjct: 233 AAEIIRLS----GVDATVAPCTSEEYKAKHPDSADRPKWSALDNRMLRCTVGNDVRDWKD 288 Query: 282 GVRNILVN 289 + + Sbjct: 289 ALACFFAH 296 >gi|15676654|ref|NP_273798.1| putative dTDP-L-rhamnose synthase [Neisseria meningitidis MC58] gi|7225985|gb|AAF41169.1| putative dTDP-L-rhamnose synthase [Neisseria meningitidis MC58] Length = 306 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 111/287 (38%), Positives = 163/287 (56%), Gaps = 8/287 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFIRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ II++ + +RGI+H VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSATIIRLLQH-----SNPVRGIYHYAGSKS-VSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALHR 281 >gi|325144206|gb|EGC66513.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240013] gi|325203843|gb|ADY99296.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M01-240355] gi|325206402|gb|ADZ01855.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis M04-240196] Length = 287 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ II++ + +RGI+H G VSW +F ++IF ++++ Sbjct: 181 CPTYAGDLSATIIRLLQH-----SNPVRGIYHYAG-GKSVSWYEFVQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|302343716|ref|YP_003808245.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075] gi|301640329|gb|ADK85651.1| dTDP-4-dehydrorhamnose reductase [Desulfarculus baarsii DSM 2075] Length = 315 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 152/290 (52%), Gaps = 3/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++G GQ+ + + + + R ++D+ P + + +++N AAY Sbjct: 14 RIYILGAGGQLGREMLRATPPAGLGLRGFSRQELDVTDPTALMAAIGAADCALVVNCAAY 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + +F++N G A+A+A D +P +++ST+Y+FDG P E +P Sbjct: 74 TAVDKAESDVQASFAVNVGGVAAMARACDEAAVPLVHVSTEYIFDGRKNGPYVEADQPSP 133 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+ K E V +VILRT+W++S G NF+ ++LRLA+ + VV DQ G Sbjct: 134 LNAYGQGKAEAERHVRLLAKRHVILRTSWLFSAHGHNFVKTILRLAQSHERLRVVVDQIG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A AI+ IA L+ G FH GPVS +FA I ++ G Sbjct: 194 CPTPARDMAEAIMHIAGQLLAGKQ-DGFGTFHYCG-AGPVSRLEFARAIVEQARPHLGET 251 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ +PT A RPA LDC+K+ + + +W+ G+ +++ + Sbjct: 252 PEIAPTSQSAFPTPAARPANCVLDCAKIVKAYGLAQKSWEPGLADVITEL 301 >gi|303238694|ref|ZP_07325227.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] gi|302593813|gb|EFL63528.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] Length = 285 Score = 304 bits (780), Expect = 8e-81, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 152/296 (51%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +V G+ GQ+ + + + +I V +I++ + S SPD IIN AA Sbjct: 1 MKVIVTGSEGQLGKEVLRQFDKSCYDITAVDLKEINITNLDEVLSMVRRVSPDAIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR------TPID 113 YT VD E + + AF++NA G ++ A+ + ++ISTDYVFDG P Sbjct: 61 YTNVDACEKDFDSAFAVNAIGPRNLSIASKEVNAKIVHISTDYVFDGAGVLKDNNIRPYM 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 EF T P YGK+KL GE V + + + I+RTAW+Y G NF+ +ML L+K + EI Sbjct: 121 EFDDTYPKTAYGKTKLEGENFVRLFNDKHFIIRTAWLYGE-GKNFVRTMLELSKAKDEIK 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ GTPTS ++ R I + DT G+FH T + G +W +F + IF Sbjct: 180 VVDDQRGTPTSTEELTRMIRCLI-------DTENYGLFHGTCE-GQCTWYEFTKEIF--- 228 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G +KV T++YP+ RP YS L+ L T + W+E + L Sbjct: 229 -LKKGITTKVLSCSTEEYPSPTPRPKYSVLENYMLKRTSSYMFKEWQEALEIYLKR 283 >gi|116071141|ref|ZP_01468410.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. BL107] gi|116066546|gb|EAU72303.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. BL107] Length = 294 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 110/294 (37%), Positives = 154/294 (52%), Gaps = 9/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + VE+I R +++L + S PD ++N AY Sbjct: 1 MKILLTGAGGQLGQALQDAKPEAVELISTTRQELNLADAEACRSAVQQHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++N A A+ + G + +STD+VF+G TP NP Sbjct: 61 TAVDKAESEPELAHAVNGGAPEAFAQELERQGGRLLQVSTDFVFNGTQGTPYQPEQTRNP 120 Query: 121 LNIYGKSKLAGEEKVAS---YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGEE + S +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEEAIQSVFGAGGRGLILRTSWVIGPVGKNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +ARA L + + + H + D G SW D A + AE G Sbjct: 181 QVGCPTSTLNLARACW---RTLQIAGERDMPAVMHWS-DNGAASWYDVAVAVGQIGAELG 236 Query: 238 GP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +KV I T YPT A RP+YS LDC+ + + W++ ++ +L Sbjct: 237 LIDTPAKVQPITTSDYPTPAERPSYSLLDCTSTRSALELDGEHWQQALKAVLQQ 290 >gi|63054927|gb|AAY29004.1| dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia] Length = 299 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 117/302 (38%), Positives = 155/302 (51%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M L+ G NGQ+ Q L I+ R D P + Sbjct: 1 MTVLLFGANGQVGQELLRSLAPLGSIVATTRSGTLANGVPCEVADFDNPGSLVALLDRVH 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD ++N AAYTAVD+AE + E A+ NAE G IA+ + G+P ++ STDYVFDG Sbjct: 61 PDTVVNAAAYTAVDRAEQDREAAWRTNAESPGVIARWCAAAGVPLVHFSTDYVFDGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG+SKLAGE + ++I RTAWVY+ +NFL +MLR+ ER Sbjct: 121 PYRESDPTGPLGVYGESKLAGEIAIREAGGRHLIFRTAWVYAPHSANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA L L G +H+TA G SW FAE IF Sbjct: 181 LLRVVADQVGTPTPAALIADVTA-----LALQHPGQLSGTWHLTA-TGEASWHGFAEAIF 234 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + RG +V I T YPT A RPAYS LD ++L + I + TW++G+ ++ Sbjct: 235 AAAVARGVLPRAPRVEAITTADYPTPARRPAYSHLDVTRLQSDFGIDLPTWQDGLAQVMA 294 Query: 289 NI 290 + Sbjct: 295 QL 296 >gi|126726123|ref|ZP_01741965.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2150] gi|126705327|gb|EBA04418.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2150] Length = 285 Score = 304 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 155/290 (53%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ++Q L+ II +GR DL P A +IN AAY Sbjct: 1 MSILVFGTTGQVSQELARRREG---IIALGRDQADLSDPAACAKLITETDCHAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + +A +N A+A A + GIP ++ISTDYVFDG P T P Sbjct: 58 TAVDKAESDEAMAALVNGAAPTAMATACAAKGIPFVHISTDYVFDGTGDQPWMVNDLTAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++KL GEE V + Y ILRT+WV+S G+NF+ +M RL ER +++V DQ G Sbjct: 118 LGAYGRTKLTGEEGVRAAGGTYGILRTSWVFSAHGNNFVKTMRRLGAERDRLTIVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A IA A + +A L+ +D+ G +H G VSWADFA IF +S Sbjct: 178 GPTAAGDIADACLAMADQLL--ADSGKSGTYHFAG-GPDVSWADFAREIFAQS----NLT 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +PT A RPA S +DCS L I W+ + +++ + Sbjct: 231 PEVVDIPTSDFPTPAARPANSRMDCSTLETVFGITRLDWRVSLADVIKEL 280 >gi|323960873|gb|EGB56493.1| RmlD substrate binding domain-containing protein [Escherichia coli H489] Length = 295 Score = 304 bits (779), Expect = 9e-81, Method: Composition-based stats. Identities = 111/296 (37%), Positives = 155/296 (52%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L I V D A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGHITAVDFDSTDYCGDFSNSAGVAETVRLVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA IAK A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVAVIAKEAEALGAWLVHYSTDYVFDGSGERPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +PLN+YG++KLAGE A+ + ++I RT+WVY+ G+NF +MLRL KERREISV+ Sbjct: 121 VISPLNVYGETKLAGEHG-AALCSRHLIFRTSWVYAARGANFAKTMLRLGKERREISVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + S + G++H+ A G +W D+A +F ++ + Sbjct: 180 DQFGAPTGAELLADCTAHAIR--VAQSKPDVAGLYHLAA-SGTTTWFDYARLVFDKARDA 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD K T ++ + W GV +L I Sbjct: 237 GVELAVTQLNAVPTGAFPTPAKRPHNSRLDTKKFQRTFDLVLPDWSVGVERMLTEI 292 >gi|239831407|ref|ZP_04679736.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum intermedium LMG 3301] gi|239823674|gb|EEQ95242.1| dTDP-4-dehydrorhamnose reductase [Ochrobactrum intermedium LMG 3301] Length = 292 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 136/292 (46%), Positives = 184/292 (63%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK V G GQ+ QSL Q D+E+I +GRP++DL +P S + PDV+++ A Sbjct: 1 MKIAVTGREGQVVQSLLEKASQRADLEVIALGRPELDLAEPGTVRSAIEAIKPDVVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD AEDE E AF++NA GAGA+A+AA++ G+P I++STDYVF G + P E T Sbjct: 61 AYTAVDLAEDEQEHAFAVNAAGAGAVAQAAENCGVPVIHLSTDYVFAGDADKPYVETDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKL GE VA ++ILRTAWVYS FG NF+ +ML+LA+ R +SVV DQ Sbjct: 121 GPRSVYGSSKLEGERLVAQANPQHIILRTAWVYSPFGKNFVKTMLKLAETRDALSVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL IA AII++A +L + S G++H+ G +W+ FA IF ESA GG Sbjct: 181 WGNPTSALDIADAIIRVADHLAAAPEFSAYGVYHLAG-TGDTNWSGFARAIFGESARLGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T YPTKA RPA S L +K N W+ +R+++ + Sbjct: 240 ATATVTDIATADYPTKARRPANSRLSTAKFQQAFNWSAPHWQSSLRDVVSRL 291 >gi|15679780|ref|NP_276898.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622923|gb|AAB86258.1| dTDP-4-dehydrorhamnose reductase [Methanothermobacter thermautotrophicus str. Delta H] Length = 280 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 14/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G++G + L + + E++ G +D+ + PD +++ AA+ Sbjct: 1 MKILITGSSGMLGSDLVDILSRRHEVVTSGS--LDIRDLEGVMELLRETRPDAVVHAAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E + A+ +N G IA AA ++G +YISTDYVFDG EF NP Sbjct: 59 TDVDCAETERDKAYQVNVLGTRNIAAAASAVGSSILYISTDYVFDGEKGDGYLEFDEPNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YGK+K GE V + + I+RT+W++ G NF+ +M+ LA+ EISVV DQ+G Sbjct: 119 LNFYGKTKYLGEVSVRQLSERFYIVRTSWLFGRNGRNFVGTMVELAERGHEISVVDDQYG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A AI + G++H+T + G SW +FA IF E G Sbjct: 179 SPTYTRDLAAAIGNLLER-------PAYGVYHLT-NSGQCSWYEFAIDIFNEL----GME 226 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + ++P A RP++S L + + +++ +R+ L + Sbjct: 227 VCLKPVKSHEFPRPARRPSFSVLRNYNWSMEGFKPLRNYRDALRDYLKD 275 >gi|218767877|ref|YP_002342389.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis Z2491] gi|121051885|emb|CAM08191.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis Z2491] gi|254669729|emb|CBA03900.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha153] gi|319410124|emb|CBY90460.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase; dTDP-6-deoxy-L-mannose dehydrogenase; dTDP-L-rhamnose synthetase) [Neisseria meningitidis WUE 2594] Length = 287 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A ++ AII++ +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYVG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|21230099|ref|NP_636016.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769910|ref|YP_244672.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. 8004] gi|21111626|gb|AAM39940.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575242|gb|AAY50652.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris str. 8004] Length = 302 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 151/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDQIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD+AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDRAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQGTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ILRTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLILRTAWVYASHGGNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I I L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 236 EEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EV 297 >gi|330829237|ref|YP_004392189.1| dTDP-4-dehydrorhamnose reductase subunit [Aeromonas veronii B565] gi|328804373|gb|AEB49572.1| dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase [Aeromonas veronii B565] Length = 295 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 157/296 (53%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L I V D P A PDVI+N Sbjct: 1 MHILLFGKNGQVGWELQRALAPLGRITAVDFDSSDYCGDFSNPAGVAETVRLVKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE E E A +NA AIAK A+++G ++ STDYVFDG P E Sbjct: 61 AAAHTAVDKAESEREFAELLNATSVAAIAKEAEALGAWLVHYSTDYVFDGRGERPWVETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ AS + ++I RT+WVY+ G+NF +MLR KER E+SV+ Sbjct: 121 ATAPLNVYGETKLAGEQG-ASLCSRHLIFRTSWVYAARGANFAKTMLRFGKERSEMSVIN 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + S + G++H+ A G +W D+A+ +F ++ E Sbjct: 180 DQFGAPTGAELLADCTAHAIR--VAQSKPEVAGLYHLIA-SGTTTWFDYAQLVFAKAREA 236 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +++ + T +PT A RP S LD K T ++ + W GV +L I Sbjct: 237 GVELAVTQLNAVPTSAFPTPAKRPHNSRLDTGKFQRTFDLVLPEWTVGVERMLTEI 292 >gi|257440888|ref|ZP_05616643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii A2-165] gi|257196668|gb|EEU94952.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii A2-165] Length = 306 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 31/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + + +I V P++D+ K F Sbjct: 1 MKIIVTGCKGQLGTEIIKQLREGRSEIGPIPEKLMNATVIPVDLPELDISNYKMVDDFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RQRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 I DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ++ ++ VV DQ G PT+A+ +AH L++ T G++H T + G SW DF Sbjct: 181 GRKFGKLEVVNDQCGNPTNAVD-------LAHELLQLCVTHEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A I S G + V +++Y P A RP +S LD L T + WKE Sbjct: 233 ASEIIRLS----GVDASVAPCTSEEYKAKHPESADRPKWSALDNRMLRCTVGNDVRDWKE 288 Query: 282 GVRNILVN 289 + + Sbjct: 289 ALACFFAH 296 >gi|254804636|ref|YP_003082857.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha14] gi|254668178|emb|CBA04874.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha14] Length = 287 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|146343779|ref|YP_001208827.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS278] gi|146196585|emb|CAL80612.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. ORS278] Length = 302 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 115/297 (38%), Positives = 166/297 (55%), Gaps = 8/297 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L+ G +GQ+ +L + E+I R DL +P A +PD+I+NPA Sbjct: 1 MRILITGTSGQVGGALRRLLPAGGTDELICPPRAAFDLTQPASLAGALDRLAPDLILNPA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDE E+A ++N + G IA+ A +P +++STDYVFDG P E Sbjct: 61 AYTAVDRAEDEAELAMTVNGQAPGVIAQWAAPRRVPLLHVSTDYVFDGAGEHPWRESDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL+ YG+SKLAGE+ V S ++I+RTAWV++ G+NF+ +++RLA+ER + VV DQ Sbjct: 121 GPLSAYGRSKLAGEDAVRSAGGPHLIVRTAWVFASAGANFMRTIVRLAREREALRVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLR---GIFHMTADGGPVSWADFAEYIFWESAE 235 GTPTSA IA I I + + G+ H+T + G SW FA I + Sbjct: 181 KGTPTSARTIAEVIAAILAQGAGDLPGAFARAEGLVHLT-NSGATSWHGFASAIVDGLRQ 239 Query: 236 RGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R P V I T +PTKA RPA S LD S+L + + +W++ + L + Sbjct: 240 RNVPVKARAVEAITTADFPTKARRPANSQLDLSRLRGAYGLVPPSWQQALSRELDEL 296 >gi|295102417|emb|CBK99962.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii L2-6] Length = 304 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 99/303 (32%), Positives = 148/303 (48%), Gaps = 31/303 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + +I V P++D+ K F Sbjct: 1 MKIIVTGCRGQLGTEIIKQLREGRSELGPIPEKLVSATVIPVDLPELDITNYKMVDDFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AA+T VD E + AF NA G +A+AA G +++STDYVF G Sbjct: 61 RQRPDVIINCAAFTNVDGCEVNHDTAFKANAIGPRNLAQAATKTGARLVHVSTDYVFSGR 120 Query: 108 SRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 P DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGIPQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A+ +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAVDLAHEILQLCV-------THEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A I S G + V +++Y P A RP +S LD L T + WK+ Sbjct: 233 ASEIIRLS----GVDATVSPCTSEEYKAKHPDSADRPKWSALDNRMLRCTVGNDVRDWKD 288 Query: 282 GVR 284 + Sbjct: 289 ALA 291 >gi|124265820|ref|YP_001019824.1| dTDP-4-dehydrorhamnose reductase [Methylibium petroleiphilum PM1] gi|124258595|gb|ABM93589.1| dTDP-4-dehydrorhamnose reductase [Methylibium petroleiphilum PM1] Length = 298 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 105/298 (35%), Positives = 163/298 (54%), Gaps = 11/298 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----DLLKPKDFASFFLSFSPDVIIN 56 M+ L++G NGQ+ L E++ + R DL P+ + PD+I+N Sbjct: 1 MRILLLGKNGQVGWELQRALAPLGELLALARDSAPLAADLGCPEALVATVRHVRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVD+AE EP +A ++NA +A+ A +G ++ STDYVFDG P DE + Sbjct: 61 AAAYTAVDRAEREPALARAVNAIAPAVLAREAAMLGATLVHFSTDYVFDGSGSAPRDESA 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P+N+YG+SKL GE + + ++ILR++WV++ GSNF ++L LA ER + +V Sbjct: 121 RTAPINVYGESKLEGEMAIRASGCRHLILRSSWVHAARGSNFAKTVLCLAAEREHLEIVD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A ++ + + SL G +H+TA GG S +A ++ + Sbjct: 181 DQIGAPTGAELLADVTAHALWSVRQ--EPSLAGTYHVTA-GGETSRHAYALFVIERARAH 237 Query: 237 GGPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V + T +PT+A RP S LD +L + +R+ W+EGV +L+ + Sbjct: 238 GHPLNVAADAVRPVPTSVFPTRARRPLNSRLDTGRLQSRFGLRLPPWQEGVERLLIEV 295 >gi|325915781|ref|ZP_08178083.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas vesicatoria ATCC 35937] gi|325538045|gb|EGD09739.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas vesicatoria ATCC 35937] Length = 299 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 152/302 (50%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M LV+G +GQ+ L D I+ R D P+ + + Sbjct: 1 MTTLVLGASGQVGTELLRALAGDGPILASTRSGRLPDGATCEVADFDAPQSLVALLDRLA 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE E + AF NAE IA+ +P ++ STDYVF+G Sbjct: 61 PTRVVNAAAYTAVDRAEQERDAAFRANAEAPAVIAQWCARADVPMVHYSTDYVFNGQGTR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P T PL +YG+SKLAGE+ V + ++I RTAWVY+ G NFL +MLR+ ER Sbjct: 121 PYRPDDTTAPLGVYGQSKLAGEQAVQAAGGRHLIFRTAWVYAAHGHNFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT A IA G++H+TA GG SW FAE IF Sbjct: 181 VLRVVADQIGTPTPAALIADITAHALRQ-----PGEPSGLWHLTA-GGQTSWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ RG V I T YPT A RPAYS LD L +T + + W++G+ +L Sbjct: 235 AQAHARGMLARVPHVEAISTADYPTPAMRPAYSRLDTHSLQDTFGVHLPAWQDGLSRVLD 294 Query: 289 NI 290 + Sbjct: 295 TL 296 >gi|254496077|ref|ZP_05108978.1| dTDP-4-dehydrorhamnose reductase [Legionella drancourtii LLAP12] gi|254354719|gb|EET13353.1| dTDP-4-dehydrorhamnose reductase [Legionella drancourtii LLAP12] Length = 312 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 148/294 (50%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQI + LS + ++ +GR ++DL PD+I+N AAY Sbjct: 15 MKILLFGRKGQIGRELSRSLLPLGQLTTLGREELDLTDLNALIHVLKQLQPDIIVNAAAY 74 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A+ +N + +A A I+ STDYVFDG + E P P Sbjct: 75 TAVDKAEQEQTQAYCVNEQAVAVMADYAQQHNTLLIHYSTDYVFDGTKQGAYIESDPRTP 134 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IYG SK AGE + + I RT+WV+S G NF+ ++L LA+++ +++V DQ+G Sbjct: 135 LSIYGASKSAGEVAIENSGCRGYIFRTSWVFSQHGHNFIKTILNLARQKDALTIVADQYG 194 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PTSA I+ + + GI+H+TA+ G SW A Y+ ++ + Sbjct: 195 APTSAELISDVT--LLAIYAAQKGQLMPGIYHLTAN-GITSWHGLACYLLEKTRVQQIDF 251 Query: 240 ---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 SK+ + ++ YP A RP S LD S L+ I W V ++ + Sbjct: 252 NLVPSKIQPVLSEAYPLPAVRPKNSALDTSALSGALQIVFPDWSIYVDRMITQL 305 >gi|313115158|ref|ZP_07800643.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622524|gb|EFQ05994.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium cf. prausnitzii KLE1255] Length = 305 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 31/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-------------DVEIIRVGRPDIDLLKPKDFASFFL 47 MK +V G GQ+ + + + +I V PD+D+ K F Sbjct: 1 MKIIVTGCKGQLGTEILKQLREGRSEIGPVPEKLLNATVIAVDLPDLDISNYKMVDEFIR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVIIN AAYT VD E + AF NA G +A+AA+ G +++STDYVF G Sbjct: 61 RNRPDVIINCAAYTNVDGCEVNHDAAFKANALGPRNLAQAAEKTGARLVHVSTDYVFSGR 120 Query: 108 SRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 + DE + P++ YG +KL GE+ V + + + I+RTAW+YS +G NF+ +++ Sbjct: 121 ENGGVAQDEATIPGPISAYGSTKLMGEKYVEQFCHRHFIVRTAWLYSYYGKNFVKTIVNA 180 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K+ ++ VV DQ G PT+A+ +A I+Q+ T G++H T + G SW DF Sbjct: 181 GKKFGKLEVVNDQCGNPTNAVDLAHEILQLCV-------THEYGLYHCTGE-GICSWYDF 232 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A I S G + V +++Y P A RP +S LD L T + WK+ Sbjct: 233 ASEIIRLS----GVDAAVAPCTSEEYKAKHPESADRPKWSALDNRMLRCTVGNDVRDWKD 288 Query: 282 GVRNILVN 289 + + Sbjct: 289 ALACFFAH 296 >gi|261879586|ref|ZP_06006013.1| dTDP-4-dehydrorhamnose reductase [Prevotella bergensis DSM 17361] gi|270333817|gb|EFA44603.1| dTDP-4-dehydrorhamnose reductase [Prevotella bergensis DSM 17361] Length = 289 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + D +D+ + + II Sbjct: 1 MNILVTGANGQLGNEMQIVAKNSKNNYLFTDVCDGYQKLDITDIEAIRKMVRENNIGCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I ++NA +AKA + ++ISTDYVF G P E Sbjct: 61 NCAAWTNVDAAETAGDIVETLNAVAPENLAKAMKEVDGLLVHISTDYVFGGDPYNVPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + ++I+RTAW+YS FG NF+ +ML L + + V Sbjct: 121 DQTGTPTGVYGLTKLHGEQKIQATGAAHIIIRTAWLYSEFGKNFVKTMLNLTATKPSLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N GI+H + + G SW DFA+ +A Sbjct: 181 VFDQAGTPTYAYDLALTIFDIVEN---RKYVGHSGIYHYSNE-GVCSWYDFAKM---TAA 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + ++P+ RPAYS LD +K+ T I + W + ++ + + Sbjct: 234 LAGHTDCDIQPCHSSEFPSPVTRPAYSVLDKTKIKETFGISVPYWVDSLKACMEKM 289 >gi|4406252|gb|AAD19916.1| dTDP-L-rhamnose synthase [Streptococcus pneumoniae] Length = 284 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLNERNVDYVAVDVTEMDITNSEMVEKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AK ++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKGSEKYGAILVYISTDYVFDGKKPVGQEWEVDDIP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LA+ + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGRNFVFTMQSLAETHKTLTVVSDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 +G PT +A + + N E G +H++ D +W DFA I ES Sbjct: 182 YGRPTWTRTLAEFMTYVTENQKE------YGYYHLSNDAAEDTTWYDFASEILKES---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVELLPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|262275863|ref|ZP_06053672.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886] gi|262219671|gb|EEY70987.1| dTDP-4-dehydrorhamnose reductase [Grimontia hollisae CIP 101886] Length = 326 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 108/310 (34%), Positives = 157/310 (50%), Gaps = 23/310 (7%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G+ GQ+A L + ++ + R +D+ K + + PDVIIN AAYTA Sbjct: 4 VLITGSGGQLAWELKATLPENRSATFLSRKQLDIRDTKAVFNLVKAEQPDVIINAAAYTA 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE EPE A+++N +G +A A + I++STD+VFDG + TP NP+N Sbjct: 64 VDKAETEPETAYAVNDKGCENLALACKEHNVILIHVSTDFVFDGTNSTPYQTDDHPNPIN 123 Query: 123 IYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SKLAGE+KVA I+RTAWVYS+ GSNF+ +MLRL E+ ++++V DQ GT Sbjct: 124 VYGASKLAGEKKVAEILGAQATIIRTAWVYSVHGSNFVKTMLRLMAEKEQLNIVYDQIGT 183 Query: 182 PTSALQIARAIIQIAHNLIENSD-----------------TSLRG--IFHMTADGGPVSW 222 PT A +A + + + G + H T D G SW Sbjct: 184 PTWAKGLATMMWSLVEKRLSEGKLSAGRKAESPREIMMLRPEYSGTKVIHWT-DAGVASW 242 Query: 223 ADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 DFA I E+G + V I + YPT A RP +S +D I W+ Sbjct: 243 YDFALAIQELGIEKGLLKAVIPVRPISSGSYPTPAARPYFSVIDKVAAEKASEIETIHWR 302 Query: 281 EGVRNILVNI 290 + + ++ + Sbjct: 303 KQLSAMMEEL 312 >gi|187476638|ref|YP_784661.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N] gi|115421224|emb|CAJ47729.1| dTDP-4-dehydrorhamnose reductase [Bordetella avium 197N] Length = 291 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 99/295 (33%), Positives = 156/295 (52%), Gaps = 12/295 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVII 55 MK L++G +GQ+ ++L E++ +GR +DL + +PDVI+ Sbjct: 1 MKILLLGKDGQVGRTLCRALAPLGELLALGRRPQPQGHVDLSDLASLSRLVREVNPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+TAVD+AE EP++AF INAE +A+A ++ S++YV+DG E Sbjct: 61 NAAAFTAVDQAEREPDLAFRINAEAPEILARAMRERQGWLVHYSSEYVYDGSGSEFRTED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 SPT PLN+YG SK AG+E + ++++LRT+WVY G F ++LRLA + +V Sbjct: 121 SPTAPLNVYGLSKRAGDEAICRSGAHHLLLRTSWVYGSRGEGFPQTVLRLAAASGTLRMV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A +A ++ G++H+ A G VS AD+A ++ ++ Sbjct: 181 DDQVGAPTGADLLADVSALALWQACRR--PAVSGLYHVAA-AGAVSRADYARHVLNQAR- 236 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 I + YPT A RP S LDC++L +R+ W++G+ L ++ Sbjct: 237 ---LACATAPIASVDYPTPAQRPLNSRLDCTRLQRVFGLRLPDWRDGLDRALASM 288 >gi|300728241|ref|ZP_07061609.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] gi|299774476|gb|EFI71100.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] Length = 299 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 102/301 (33%), Positives = 152/301 (50%), Gaps = 18/301 (5%) Query: 1 MKCLVIGNNGQIAQSLS---SMCVQDV----EIIRVGRPD---IDLLKPKDFASFFLSFS 50 M LV G NGQ+ + QD ++I + + +D+ K +D Sbjct: 1 MNILVTGANGQLGNEIRLVSQQSTQDHYIFTDVIALEGVETTILDITKLEDVRKIVKEQD 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-R 109 IIN AA+T VDKAE +I ++NA +AKA + ++ISTDYVF G Sbjct: 61 VKCIINCAAWTNVDKAETAGDIVETLNATAPENLAKAMKEVDGELVHISTDYVFGGDPYN 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 TP E P +YG +KL GE+K+ + NY+I+RTAW+YS FG NF+ +ML L + Sbjct: 121 TPCKEDQKGTPTGVYGMTKLHGEQKIQASGVNYLIIRTAWLYSEFGHNFVKTMLNLTASK 180 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++ VV DQ GTPT A +A AI I N +T G++H + + G SW DF I Sbjct: 181 PQLKVVFDQTGTPTYAGDLATAIFDIIENRKYEGNT---GVYHYSNE-GVCSWYDFTVKI 236 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + + ++P+ RPAYS LD +K+ T I + W + ++ + N Sbjct: 237 ---AELAGNTNCDIQPCHSNEFPSPVTRPAYSVLDKTKIKETFGIHVPYWVDSLKTCMRN 293 Query: 290 I 290 + Sbjct: 294 M 294 >gi|121310082|dbj|BAF44347.1| dTDP-rhamnose synthase [Streptococcus oralis] Length = 284 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 147/292 (50%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + V+ + V ++D+ + F +P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERSVDYVAVDVAEMDITNAEMVEKVFAEVNPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYEATLVYISTDYVFDGKKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V S T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVESLTSQHYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTDNQKE------YGYYHLSNDSTEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + ++P KA RP S + +K T I TW++ ++ Sbjct: 232 --DVEVVPVDSSKFPAKAKRPLNSTMSLAKAKAT-GFVIPTWQDALKEFYKQ 280 >gi|322433402|ref|YP_004210619.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] gi|321165791|gb|ADW71492.1| dTDP-4-dehydrorhamnose reductase [Acidobacterium sp. MP5ACTX9] Length = 304 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 163/301 (54%), Gaps = 14/301 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 L+ G+ GQ+ L + +E+ R +DL P + P IINPAA Sbjct: 4 ILITGSTGQVGGELVRLFRSQNPSLEVHAPDRSQLDLRDPASIRDVVRTLLPQWIINPAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + E AF++NAE + + A IG P ++ STDYVF G + P +E Sbjct: 64 YTAVDRAESDQEDAFAVNAEAPRILGEEAAVIGAPVLHFSTDYVFAGDAERPYEETDLAK 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SKLAGE +A+ ++I RT+WVY G NFL ++LR+A+++ ++ +V DQ Sbjct: 124 PLGVYGLSKLAGERNLAASGAAHLIFRTSWVYGATGKNFLRTILRVARQQPQMRIVADQH 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDT--------SLRGIFHMTADGGPVSWADFAEYIFW 231 G PT+A +A+ I L E + S++GI++ T + G +W FAE Sbjct: 184 GAPTAARDLAQMTATIVAQLEETAGAGDLAEAIRSIQGIYNAT-NSGDTTWFGFAEEALR 242 Query: 232 E--SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +AE ++++ I T +YPT A RPA S L C KL+ T I++ W+ + +L Sbjct: 243 LRRAAEPCISFAELIPIPTAEYPTPARRPASSRLSCVKLSRTFVIQMRPWQTALGEVLKE 302 Query: 290 I 290 I Sbjct: 303 I 303 >gi|190572702|ref|YP_001970547.1| putative dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia K279a] gi|190010624|emb|CAQ44233.1| putative dTDP-4-dehydrorhamnose reductase [Stenotrophomonas maltophilia K279a] Length = 301 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 115/302 (38%), Positives = 159/302 (52%), Gaps = 18/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q L +++ R D +P+ + Sbjct: 1 MTVLVFGGNGQVGQELLRALAPLGKVVATTRSGTLPDGSACETADFGQPESLPALLDRLR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD+AE E + AF+ NA+ G IA+ + G+P ++ STDYVFDG Sbjct: 61 PSIVVNAAAYTAVDRAEQEVDAAFAANAQAPGVIARWCAAHGVPFVHYSTDYVFDGQGTV 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E PT PL +YG SK GE+ V + ++I RTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYHEDEPTAPLGVYGTSKRDGEDAVRAAGGRHLIFRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++ VV DQ GTPT A IA Q + L G +H+TA G SW FAE IF Sbjct: 181 QLRVVADQVGTPTPAALIADVTAQALQH-----PGQLSGTWHLTA-SGQTSWHGFAEAIF 234 Query: 231 WESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ES G V I + +YPT A RPA+S LD KL I + W++G++ ++ Sbjct: 235 AESLAAGVLVKAPSVEAIPSSEYPTPAKRPAWSVLDNRKLQQDFGIVLPVWQDGLKRVIG 294 Query: 289 NI 290 + Sbjct: 295 EV 296 >gi|299532672|ref|ZP_07046060.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni S44] gi|298719307|gb|EFI60276.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni S44] Length = 301 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 16/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGRNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDVGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKEGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHVSAHEGDG--GLYHLVA-AGETNWHAYASHVIE 237 Query: 232 ESA----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + T +PT A RP S LD KL T + + W++GV +L Sbjct: 238 RAQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERML 297 Query: 288 VNI 290 I Sbjct: 298 REI 300 >gi|325127860|gb|EGC50766.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis N1568] Length = 287 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 169/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G+NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGNNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +F ++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFVQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PIPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|295695519|ref|YP_003588757.1| dTDP-4-dehydrorhamnose reductase [Bacillus tusciae DSM 2912] gi|295411121|gb|ADG05613.1| dTDP-4-dehydrorhamnose reductase [Bacillus tusciae DSM 2912] Length = 286 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 164/289 (56%), Gaps = 12/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +V G NGQ+ L + + ++ D+D+ + P+V+I+ AAY Sbjct: 1 MKIIVTGANGQLGCDLIRVLETEATVVPFSHRDLDVADNDRVSQVIEDVRPEVVIHAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE +P+ AF +NA GA +A AA+++G +Y+STDYVFDG + EF +P Sbjct: 61 TRVDEAERDPDEAFRVNAIGARNVAAAAEAVGAKVVYVSTDYVFDGKKPS-YSEFDTPSP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGE+ A + + I+RT+W+Y G NF+ +ML LA++ + + VV DQ G Sbjct: 120 INVYGRSKLAGEQMTALFNRRHFIVRTSWLYGRNGKNFVKTMLELARQGKPVRVVNDQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +AR I ++ T+L G +H ++ G SW +FA+ IF E+ G Sbjct: 180 SPTYTMDLARFIGRLI-------STNLFGTYH-ASNSGSCSWYEFAKAIFEEA---GFSD 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I +++ A RPA+S LD + + W+E +R+ + + Sbjct: 229 VQVEPISSRELARAAARPAFSVLDHQAIRLNRLEDLRPWREALRDFVRH 277 >gi|296137703|ref|YP_003644947.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|295981872|emb|CBH22830.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 302 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 98/284 (34%), Positives = 146/284 (51%), Gaps = 4/284 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ +L + GR +DL + PD+++N AAYT Sbjct: 8 ILLLGATGQVGHALRRTLAPLGRVHTPGRAAVDLTDLTSVRAAVQELGPDLVVNAAAYTD 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE+EPE A INAE +A+AA ++G ++ STDYVFDG R P E NP+N Sbjct: 68 VDGAEEEPERASRINAEAPRVLAEAARAVGAWLVHYSTDYVFDGTKRAPYTEADAPNPIN 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +Y ++K GE + + ++ILRT+W+YS SNF+ +ML LA E ++VV DQ G P Sbjct: 128 VYSRTKRDGEAAIQAVGGRHLILRTSWMYSRRRSNFVRTMLGLADENDRLTVVDDQIGVP 187 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A A A I L+ D +L G++H+ G SW A A+ G + Sbjct: 188 TWAGWCAEATASICERLLAEDDAALSGLYHLAG-TGQTSWYGLARAAL---AQFGRTDTA 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + + +Y T A RPAY+ LD S++ ++ W + Sbjct: 244 IEPVSSGEYETAAPRPAYTVLDSSRVRAAFDLPAVPWTAQLARF 287 >gi|313890580|ref|ZP_07824208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pseudoporcinus SPIN 20026] gi|313121097|gb|EFR44208.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pseudoporcinus SPIN 20026] Length = 284 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + + + + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERNEDYVAVDVAEMDITNEEMVDQVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPT 118 AVD AEDE + +IN +G IAKA +YISTDYVFDG + E Sbjct: 62 AVDAAEDEGKALNQAINVDGTENIAKACQKYDATLVYISTDYVFDGTKTVGQEWFETDIP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y+ Y I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYSKKYYIIRTAWVFGNYGKNFVFTMQNLAKTHPKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT +A + +A N G +H++ D +W DFA+ I ++ Sbjct: 182 FGRPTWTRTLAEFMCYLAEN------NKAFGYYHLSNDSQEDTNWYDFAKEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I W++ ++ Sbjct: 232 --DVEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPMWQDALQEFYKQ 280 >gi|99077993|ref|YP_611252.1| dTDP-4-dehydrorhamnose reductase [Ruegeria sp. TM1040] gi|99034936|gb|ABF61990.1| dTDP-4-dehydrorhamnose reductase [Ruegeria sp. TM1040] Length = 299 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 123/290 (42%), Positives = 157/290 (54%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L+ +I VGR DL P A+ +P+ +IN AAY Sbjct: 19 MSILVFGATGQVARELARHEG----VISVGREQADLSDPGACAALIRETAPEAVINAAAY 74 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+A A +GIP ++ISTDYVF G P P P Sbjct: 75 TAVDKAETEEELATVINGAAPGAMAAACVQMGIPFVHISTDYVFAGTGEAPWQTDDPVAP 134 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + Y ILRT+WV S G+NF+ +MLRL R ++SVV DQ G Sbjct: 135 PNAYGRSKRAGEEAVIAAGGTYAILRTSWVVSAHGNNFVKTMLRLGAARAQVSVVADQIG 194 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A +++A L+ + GI+H VSWA FA IF S Sbjct: 195 APTPARDIAEACLKMARQLV--LEPKKSGIYHFQG-APYVSWAGFAAEIFAIS----NLA 247 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP S LDC+ L I W+ G+++IL + Sbjct: 248 CEVVEIPTTDYPTPAVRPLNSRLDCTTLETVFGIPQPDWRRGLQDILKEL 297 >gi|56752003|ref|YP_172704.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechococcus elongatus PCC 6301] gi|81300908|ref|YP_401116.1| dTDP-4-dehydrorhamnose reductase [Synechococcus elongatus PCC 7942] gi|56686962|dbj|BAD80184.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechococcus elongatus PCC 6301] gi|81169789|gb|ABB58129.1| dTDP-4-dehydrorhamnose reductase [Synechococcus elongatus PCC 7942] Length = 289 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 105/293 (35%), Positives = 147/293 (50%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L V++I GR +DL + + PD +IN AY Sbjct: 1 MKVLLTGAAGQVGQALQRSHPDGVDLIACGRQQLDLSDESAIRAAIQTLRPDWVINAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EP +A +IN+ +A++ G + ISTD+VF+G P + P Sbjct: 61 TTVDRAESEPALAIAINSNSVRILAESLAETGGNLLQISTDFVFNGDRNRPYPTDAERQP 120 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L++YG +K A EE + + +I+RTAWVY + G NF+ +MLRL ER ++VV DQ Sbjct: 121 LSVYGTTKAAAEEAILQFLPERSLIVRTAWVYGLGGRNFVTTMLRLMAERDHLTVVWDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT +A A+ Q + GI H T D G SW DFA I + E G Sbjct: 181 GTPTWTDSLAAALWQAIAQNL-------MGIHHCT-DAGVASWYDFAVAIQDLALELGLL 232 Query: 240 YSKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RPAYS LDC+ W+ + +L + Sbjct: 233 QQAVPIAAIPSSDYPTPATRPAYSVLDCADFNRAIGHDPLHWRHALAQMLTQV 285 >gi|153864709|ref|ZP_01997517.1| RmlD substrate binding domain [Beggiatoa sp. SS] gi|152145797|gb|EDN72484.1| RmlD substrate binding domain [Beggiatoa sp. SS] Length = 289 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 113/288 (39%), Positives = 152/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPDVI 54 + L+IG GQ+ L E+ VGR IDL P P +I Sbjct: 5 RILLIGPTGQVGWELQRCVQPLGEVFTVGRAPTGVAQAFIDLSDPDSIRRVLREIKPTII 64 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVDKAE E E+A +IN G +A+ + + I+ STDYVFDG E Sbjct: 65 LNAAAYTAVDKAEQESELAHTINGTAPGILAEESLRLKSLLIHYSTDYVFDGSHSQAYTE 124 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 NPL +YG SKLAGE+ + + +Y I RTAWVY + G NFLL+M RLAKER E+ + Sbjct: 125 TDAVNPLCVYGTSKLAGEQAICAVGGHYFIFRTAWVYGLRGKNFLLTMQRLAKERDELKI 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIF 230 V DQ G PT + IA+A I L +S GI+++T+ G +W +FA+ I Sbjct: 185 VADQIGAPTWSQMIAQATALILAQLRSPLYSSDIEGLSGIYNLTS-AGQTNWYEFAKAII 243 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + ++ ++ I T YPT A RPAYS +KLA T I + T Sbjct: 244 AQLDKQ----PRMLPITTADYPTPAKRPAYSVFINTKLAQTFGISLPT 287 >gi|313668764|ref|YP_004049048.1| dTDP-4-dehydrorhamnose reductase [Neisseria lactamica ST-640] gi|313006226|emb|CBN87688.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria lactamica 020-06] Length = 287 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 161/292 (55%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLASAAYRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----SSPVRGIYHFAG-GKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|454899|emb|CAA50768.1| rfbA [Shigella flexneri] Length = 300 Score = 303 bits (776), Expect = 2e-80, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 152/296 (51%), Gaps = 8/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EP A +NA AI KAA+ +G I+ STDYVF G T E Sbjct: 61 AAAHTAVDKAESEPNFAQLLNATCVEAIIKAANEVGAWVIHYSTDYVFPGNGDTAWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG +KLA + + + ++I RT+WVY+ G+NF +MLRLAK+R ++V+ Sbjct: 121 ATAPLNVYGGTKLAWGKALQDHCGKHLIFRTSWVYAGKGNNFAKTMLRLAKDRETLAVIT 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT AL + + A L N + G++H+ A GG +W D+ +F E+ Sbjct: 181 DQFGAPTGALDLLADCTRHAIWLAAN-KPEVAGLYHLVA-GGTTTWHDYPALVFKEARRA 238 Query: 237 G--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P +K+ + T YPT A P L+ K + + W+ GV+ +L + Sbjct: 239 GFNLPLNKLNAVPTTAYPTPARGPHNFRLNTEKFQQNFALVLPDWQVGVKRMLNEL 294 >gi|282860056|ref|ZP_06269137.1| dTDP-4-dehydrorhamnose reductase [Prevotella bivia JCVIHMP010] gi|282587144|gb|EFB92368.1| dTDP-4-dehydrorhamnose reductase [Prevotella bivia JCVIHMP010] Length = 290 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 146/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + Q + I D +D+ S I+ Sbjct: 1 MNILVTGANGQLGNEMQLVAKQSKDNYIFTDVCDGYTKLDITNLDTVRSIVKQNDIKCIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDE 114 N AA+T VD AE +I ++NA +AKA + I+ISTDYVF G TP E Sbjct: 61 NCAAWTNVDAAEIAGDIVETLNATAPENLAKAMKEVDGLLIHISTDYVFGGDPYNTPCKE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GE+K+ + NY+I+RTAW+YS FG NF+ +M+ L + ++ V Sbjct: 121 DQKGTPTGVYGLTKLHGEQKIQAVGGNYIIIRTAWLYSEFGKNFVKTMINLTATKPQLKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A I I N + GI+H + + G SW DF I + Sbjct: 181 VFDQCGTPTYAGDLADTIFTILENRKFEGN---SGIYHFSNE-GVCSWFDFTVKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ + ++P+ RP+YS LD +K+ NT I+I W ++ + + Sbjct: 234 LAGNTTCEILPCHSCEFPSPVTRPSYSVLDKTKIKNTFGIKIPYWTNSLKKCINRL 289 >gi|83814384|ref|YP_444734.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] gi|83755778|gb|ABC43891.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] Length = 302 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 95/284 (33%), Positives = 143/284 (50%), Gaps = 4/284 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ +L + GR +DL + PD+++N AAYT Sbjct: 8 ILLLGATGQVGHALRRTLAPLGRVHTPGRAAVDLTDLTSVRAAVRELGPDLVVNAAAYTD 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE+EP A INAE +A+AA ++G ++ STDYVF G R P E +P++ Sbjct: 68 VDGAEEEPGRAARINAEAPRVLAEAARAVGAWLVHYSTDYVFGGTKRAPYTEADAPSPIS 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++K GE + + ++ILRT+WVYS SNF+ +ML LA E ++VV DQ G P Sbjct: 128 VYGRTKRDGEAAIQAVGGRHLILRTSWVYSRRRSNFVRTMLGLAAENDRLTVVDDQIGVP 187 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A A A + L+ + G +H+ G SW A +F A+ G Sbjct: 188 TWAGWCAEATASVCERLLADDAAPEAGCYHLAG-TGQTSWYGLARAVF---AQFGRTDVA 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + +Y T A RPAY+ LD S+ ++ +TW + Sbjct: 244 AQPVSSDEYETAAPRPAYTVLDSSRARAAFDLPATTWTAQLDRF 287 >gi|28198139|ref|NP_778453.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Temecula1] gi|182680769|ref|YP_001828929.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M23] gi|28056199|gb|AAO28102.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Temecula1] gi|182630879|gb|ACB91655.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M23] gi|307579235|gb|ADN63204.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 302 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 159/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGVGCVQADFGQPETLRALLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 60 PVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGTS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 120 PYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATSE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE IF Sbjct: 180 CLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEIF 235 Query: 231 WESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 236 VQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVLD 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|225025749|ref|ZP_03714941.1| hypothetical protein EIKCOROL_02653 [Eikenella corrodens ATCC 23834] gi|224941530|gb|EEG22739.1| hypothetical protein EIKCOROL_02653 [Eikenella corrodens ATCC 23834] Length = 290 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 113/286 (39%), Positives = 161/286 (56%), Gaps = 6/286 (2%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G++GQ+ Q+L + ++ R ++D+ P VIIN AA Sbjct: 1 MKLLITGHHGQVGQALIQQAAAHNFQVAAYDRSELDIANRAAVLQTVEREQPAVIINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP A++ NAEGA +A+AA ++G ++ISTDYVF+G + P E + Sbjct: 61 YTAVDKAESEPAAAYAANAEGADNLARAAHAVGAAILHISTDYVFNGRTERPYLETDTPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYG+SKL GE+ V + ++ILRTAWV+ G NF+ +MLRL +ER + VV DQ Sbjct: 121 PQTIYGRSKLVGEQAVQADCPRHIILRTAWVFGEHGHNFVKTMLRLGRERDSLGVVADQS 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 G PT A IA +++ IA ++ G++H + +W FA IF +AE+G Sbjct: 181 GAPTYAGHIAASLLYIAGR--TQTENCPYGLYHFSG-SPYTTWHGFAAEIFRRAAEQGIL 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++ I T YPT A RPA S LDCSK+ I S W+ + Sbjct: 238 LRSPELRAITTADYPTPARRPADSRLDCSKIHTAFGITPSDWQSAL 283 >gi|194466308|ref|ZP_03072295.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] gi|194453344|gb|EDX42241.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] Length = 279 Score = 302 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + + +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGIAYDAFDSKQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKRVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ + SW +FA I + Sbjct: 183 GRPTWTRTLAEFMTYLVDH------DQPFGTYQLSNENS-CSWYEFATEILKD------K 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + + YP KA+RP +S + K NT I W+ + + Sbjct: 230 DVKVAPVDSSAYPAKAYRPRHSVMSLKKAENT-GFEIVDWQTALGEFM 276 >gi|296708|emb|CAA80331.1| OAC2 [Azorhizobium caulinodans ORS 571] Length = 296 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 112/282 (39%), Positives = 166/282 (58%), Gaps = 5/282 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G +GQ+ + L+++ V+ + + + R D+ P A + PDV++N AA Sbjct: 1 MRVLLLGADGQLGRELTALAVERGLALAALNRAATDITDPVAVAKALEAHKPDVVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++A +NA G IA+ S G+P I++STDYVFDG E P Sbjct: 61 YTAVDKAESEPDLAAKVNAVAPGLIAERCASAGVPLIHVSTDYVFDGTKTGAYVESDPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AGE + + ++ILRTAWVY I+G+NFL +MLRLAK+R +++V DQ Sbjct: 121 PLGVYGRTKAAGEAAIRAAGEKHLILRTAWVYGIYGNNFLKTMLRLAKDRDRLTIVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+ IA I +A + ++ G +H+ G +W FA+ I +A G Sbjct: 181 GCPTATRDIAEGI--LAAAAPAVAGSARWGTYHL-GGTGVTTWHGFAQAIIDRAATYTGR 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S+V I T +YPT A RPA S LD S T + R + W++ Sbjct: 238 -SEVAAITTAEYPTPARRPANSELDSSLFERTFHFRAAPWQQ 278 >gi|260435295|ref|ZP_05789265.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8109] gi|260413169|gb|EEX06465.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8109] Length = 294 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 113/294 (38%), Positives = 155/294 (52%), Gaps = 9/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + + +E++ R +DL + PD ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIASAPEGIELVATSRQQLDLADTEACRGAVQEHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++NA A A+A D G + ISTD+VF+G TP NP Sbjct: 61 TAVDKAESEPELAHAVNAGAPEAFARALDQQGGRLLQISTDFVFNGTQGTPYQPEQARNP 120 Query: 121 LNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGE V + +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEAAVQTIFGAGGRGLILRTSWVIGPVGRNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A Q L D L + H + D G SW D A + A+ G Sbjct: 181 QVGCPTSTLNLAQACWQ---TLRIAGDRELPAVMHWS-DAGASSWYDVAVAVGQIGADLG 236 Query: 238 GP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V I T YPT A RPAYS LDC+ ++ W++ ++N+L Sbjct: 237 LIDTPAAVQPITTADYPTPAERPAYSLLDCTSTRAALDLNGEHWQQALKNVLQQ 290 >gi|121634552|ref|YP_974797.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis FAM18] gi|304387935|ref|ZP_07370108.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ATCC 13091] gi|120866258|emb|CAM09999.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis FAM18] gi|254671818|emb|CBA03938.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha275] gi|304338032|gb|EFM04169.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis ATCC 13091] gi|308388944|gb|ADO31264.1| putative dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis alpha710] gi|316983741|gb|EFV62722.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis H44/76] gi|325197976|gb|ADY93432.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis G2136] gi|325200558|gb|ADY96013.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis H44/76] Length = 287 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 168/292 (57%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ + ++ + Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKALAQVVSKL 286 >gi|171057311|ref|YP_001789660.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6] gi|170774756|gb|ACB32895.1| dTDP-4-dehydrorhamnose reductase [Leptothrix cholodnii SP-6] Length = 296 Score = 302 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 156/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK L++G NGQ+ L E+I + R DL +P A+ + P VI+N Sbjct: 1 MKILLLGKNGQLGWELQRALAPLGELIALDRHATDFAADLAQPDSLAATVRALQPQVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYTAVDKAE EPE+A ++NA G +A+AA G ++ STDYVFDG E + Sbjct: 61 AAAYTAVDKAESEPELARTVNATSPGVLAQAAAEAGAWLLHYSTDYVFDGSGTAARSEDA 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KL GE + + ++ILRT+WVY+ G NF +MLRLA ER ++V+ Sbjct: 121 ATAPLNVYGQTKLEGEAAIRASGCRHLILRTSWVYAARGGNFAKTMLRLAGERERLTVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT A +A + ++ + G +H A GG SW +A ++ + Sbjct: 181 DQIGAPTGADLLADLSAHMLRQALQQPE--CAGTYHAVA-GGETSWHAYARHVIEWARAH 237 Query: 237 GG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + + + + T A RP S L ++L + + W+ GV +L + Sbjct: 238 GHELKATDIAAVPSSAFATAAQRPLNSRLSTARLQQVFGLHLPHWQTGVDRMLAEV 293 >gi|86130452|ref|ZP_01049052.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134] gi|85819127|gb|EAQ40286.1| dTDP-4-dehydrorhamnose reductase [Dokdonia donghaensis MED134] Length = 291 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 164/292 (56%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G GQ+AQ+++ ++V I + + ++D+ PDVIIN AA Sbjct: 9 RLLITGGGGQVAQAINEEEATFENVTSIHLSKSELDITSTSSIKKAIDLHQPDVIINTAA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE++ E AF +N G +A+A GI I+ISTDYVFDG E N Sbjct: 69 YTAVDAAEEDKEKAFLVNEIGVKNLAQACKDNGIKLIHISTDYVFDGEKPEEYTEEDIPN 128 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YGKSKLAGE+ + + +Y I+RT+WVYS++GSNF+ +MLRL + EISVV DQ Sbjct: 129 PTTVYGKSKLAGEQAIINSGLLDYAIIRTSWVYSVYGSNFVKTMLRLGNVKDEISVVNDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G+PT A +A I+Q+++ L + G++H T + G +W FA+ +F Sbjct: 189 YGSPTLANNLASVILQLSNVLTIQNA----GVYHYTNE-GVTTWYAFAKAVFSYKKM--- 240 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + ++ TKA RP S L+ SK+ I W+E + +LV + Sbjct: 241 -SINVLPVSSDRFVTKATRPKNSKLESSKIITLLGIENVPWEESLEKMLVKL 291 >gi|332523419|ref|ZP_08399671.1| dTDP-4-dehydrorhamnose reductase [Streptococcus porcinus str. Jelinkova 176] gi|332314683|gb|EGJ27668.1| dTDP-4-dehydrorhamnose reductase [Streptococcus porcinus str. Jelinkova 176] Length = 285 Score = 302 bits (773), Expect = 5e-80, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+ GQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSKGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVDQVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID--EFSPT 118 AVD AE+E + IN +G IAKA +YISTDYVFDG + E Sbjct: 62 AVDAAEEEGKALNQVINVDGTENIAKACQKYDATLVYISTDYVFDGTKTVGQEWFETDIP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V Y+ Y I+RTAWV+ +G NF+ +M LAK +++VV DQ Sbjct: 122 DPQTEYGRTKRLGEEAVEKYSKKYYIIRTAWVFGNYGKNFVFTMQNLAKTHSKLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 FG PT +A + +A N G +H++ D SW DFA+ I ++ Sbjct: 182 FGRPTWTRTLAEFMCYLAEN------NKAFGYYHLSNDSKEDTSWYDFAKEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I W++ ++ Sbjct: 232 --DVEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPMWQDALQEFYKQ 280 >gi|158522536|ref|YP_001530406.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3] gi|158511362|gb|ABW68329.1| dTDP-4-dehydrorhamnose reductase [Desulfococcus oleovorans Hxd3] Length = 298 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 146/291 (50%), Gaps = 16/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G NGQ+ + +I+ V ++D+ P PD+I+N AA+ Sbjct: 1 MKLLLCGANGQLGKDCMRHFAHGWDIVPVDVDELDITDPAAVQDMVGDHRPDLILNCAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 TAVD E E + AF+ NA G +A+AA G ++ISTDYVFDG P E P Sbjct: 61 TAVDACETEQDTAFAANAGGPENLAQAAQKRGCRLVHISTDYVFDGERPVPEAYIETDPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR--EISVVC 176 +P+++YG+SKLAGE+ V + ++RTAW+Y + G NFL +ML LA + I+VV Sbjct: 121 DPVSVYGRSKLAGEQAVLETGSANTVVRTAWLYGMGGKNFLKTMLGLALKNPCTPITVVA 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT + +A + IA + GI+H T G SW D A Y Sbjct: 181 DQFGCPTWSDTLALQLKVIA-------EKGGGGIYHATGQ-GYCSWHDLAAYFLKRMDVL 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T YPT A RP + L +L + + + W++ V + + Sbjct: 233 HA----ISPCTTADYPTPARRPKNAILKNRRLETENLLVMRNWQDDVDDFV 279 >gi|15836863|ref|NP_297551.1| dTDP-4-keto-L-rhamnose reductase [Xylella fastidiosa 9a5c] gi|9105073|gb|AAF83071.1|AE003879_6 dTDP-4-keto-L-rhamnose reductase [Xylella fastidiosa 9a5c] Length = 302 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 124/302 (41%), Positives = 159/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGRECVQADFDRPETLRPLLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 60 PAQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCARHGVPLVHYSTDYVFDGQGTS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 120 PYGVDDPVAPLNIYGASKLAGERAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATSE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT+A IA Q+ L + GI+H+TA G SW FAE IF Sbjct: 180 RLPVVADQIGTPTAAGLIADVTAQL---LAGGGQSRHAGIWHLTA-TGQTSWHGFAEEIF 235 Query: 231 WESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I + YPT A RPAYSCLD + L T I + W++GVR +L Sbjct: 236 AQAQACGLMMRVPQVQAIASVGYPTAARRPAYSCLDTTALVETFGIVLPDWRQGVRGVLD 295 Query: 289 NI 290 +I Sbjct: 296 DI 297 >gi|71898671|ref|ZP_00680841.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] gi|71731618|gb|EAO33679.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] Length = 302 Score = 301 bits (772), Expect = 6e-80, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 160/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGAGCVQADFGQPETLRALLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + + Sbjct: 60 PAQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQATS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 120 PYGVDDPVTPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATSE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE IF Sbjct: 180 CLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEIF 235 Query: 231 WESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 236 VQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVLD 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|298353047|gb|ADI77025.1| RmlD [Escherichia coli] Length = 299 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 100/296 (33%), Positives = 146/296 (49%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + D P+ A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDK P + + K +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKLSQNPNLHNYSMRPALNQLQKRPMKVGAWVIHYSTDYVFPGTGEIPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQENCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + + + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-SGTTTWHDYAALVFEEARKA 237 Query: 237 GGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P + K+ I T YPT A RP S L+ K + + W+ GV+ +L + Sbjct: 238 GIPLALNKLNAISTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL 293 >gi|294506498|ref|YP_003570556.1| DTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|294342826|emb|CBH23604.1| DTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 302 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 97/284 (34%), Positives = 144/284 (50%), Gaps = 4/284 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ +L + GR +DL K P++I+N AAYT Sbjct: 8 ILLLGATGQVGHALRCTLAPLSRVHTPGRAAVDLTDLKSVREAVRELGPELIVNAAAYTD 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE+EP A INAE +A+AA ++G ++ STDYVF G R P E +P++ Sbjct: 68 VDGAEEEPGRAARINAEAPRVLAEAARAVGAWLVHYSTDYVFGGTKRAPYTEADAPSPIS 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG++K GE + + ++ILRT+W+YS SNF+ +MLRLA E ++VV DQ G P Sbjct: 128 VYGRTKRDGEAAIQAVGGRHLILRTSWMYSRRRSNFVRTMLRLAAENDRLTVVDDQIGVP 187 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A A A + L + G +H+ G SW A +F A+ G Sbjct: 188 TWAGWCAEATASVCERLFADDAAPAAGCYHLAG-TGQTSWYGLARAVF---AQFGRTDVT 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + + +Y T A RPAY+ LD S+ ++ +TW + Sbjct: 244 VEPVSSDEYETAAPRPAYTVLDSSRARAAFDLPATTWTAQLDRF 287 >gi|221194769|ref|ZP_03567826.1| dTDP-4-dehydrorhamnose reductase [Atopobium rimae ATCC 49626] gi|221185673|gb|EEE18063.1| dTDP-4-dehydrorhamnose reductase [Atopobium rimae ATCC 49626] Length = 299 Score = 301 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 30/308 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFASFFL 47 M+ L+ G +GQ+ L + +D E+ + ++D+ + ++F+ Sbjct: 1 MRILITGAHGQLGNELKRLLESGQAEIGPISSAYKDAEVDYIDIDELDISNHEAVDAWFI 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P D++IN AA T VD E + AF+ NA G +A+A +G I++STDYVF G Sbjct: 61 AHDPYDLVINGAAMTNVDGCEKHFDQAFAANALGPMNLARACSRMGSKFIHVSTDYVFPG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P E P++ YG+SKLAGE + + ++R AW+Y G NF+ +M L Sbjct: 121 TDPRPRTEADVPAPISAYGRSKLAGEGLALAAYAHTFVVRVAWLYGYEGKNFVATMRSLG 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 ++ EI VV DQFG PTSA +A+ L+ T GI+H T + G SWADFA Sbjct: 181 EKYDEICVVDDQFGNPTSAND-------LAYELLALGVTDEYGIYHCTNE-GTCSWADFA 232 Query: 227 EYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 E I S G +V R+ + + P A RPAYS L+ + LA T ++ W+E Sbjct: 233 EAIMRGS----GLDCRVKRVSSADWKEMHPESASRPAYSSLENAHLAATIGNKMRPWQEA 288 Query: 283 VRNILVNI 290 + L + Sbjct: 289 LATYLATV 296 >gi|157694176|ref|YP_001488638.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus pumilus SAFR-032] gi|157682934|gb|ABV64078.1| spore coat polysaccharide biosynthesis protein SpsK [Bacillus pumilus SAFR-032] Length = 284 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + LS + D+ +I + R +++ + F P ++++ AA Sbjct: 1 MKVLITGAGGQLGKELSRQLKEKDITVIALTRSMLNIADQQAVRHAMRHFRPHIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+ E E E A+ +N GA A A +IG +++STDYVFDG + TP + + Sbjct: 61 YTSVDQCETETEKAYLVNGIGAYYTALEAKNIGADVLHVSTDYVFDGQADTPYKVDAQAD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYGKSK GEE + ++ I+RT+W+Y G NF+ ++LRLA+ + ++ +V DQ Sbjct: 121 PQTIYGKSKKLGEELIHLVSDEVKIIRTSWLYGHEGHNFVNTILRLAETKDQLRIVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A AII + GI+H++ + SW DFA I +S G Sbjct: 181 GSPTYTKDVAEAIIHLFDQ--------QAGIYHVS-NRESCSWFDFASEIVAKS----GL 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I T++Y + RPAYS LD + T + WK+ + L Sbjct: 228 STTIEPISTEEYGFQTPRPAYSVLDLQAIEAT-GWQPRHWKDALHEYLQK 276 >gi|291459803|ref|ZP_06599193.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sp. oral taxon 078 str. F0262] gi|291417593|gb|EFE91312.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sp. oral taxon 078 str. F0262] Length = 315 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 158/313 (50%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG-RPD-----------------IDLLKPKD 41 M+ LV G GQ+ + + + +E + P+ +D+ + Sbjct: 11 MRVLVTGVGGQLGHDVMNELFRRGIEGVGSDLSPEYNGISDGSAVTSMPYLSMDITDSEA 70 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 + SPD +++ AA+TAVD AED + E INAEG +A+AA G +Y+S Sbjct: 71 VSRRMSELSPDAVVHCAAWTAVDDAEDADKVEKVMRINAEGTRFLAEAAKKAGAKFLYLS 130 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YGKSKL GE V+ Y I+RTAWV+ + G NF Sbjct: 131 TDYVFDGRGERPWEPDEKDYAPLNVYGKSKLEGELAVSEILEKYFIVRTAWVFGLNGKNF 190 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + ++L + + + VV DQ GTPT L +AR ++ + ++ G +H T +GG Sbjct: 191 IRTILNVGRTHESVRVVSDQVGTPTYTLDLARLLVDMI-------ESEKYGYYHATNEGG 243 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DFA+ I+ ++ G +K+ + T +Y +KA RP S LD SKL + Sbjct: 244 YISWYDFAKEIYRQA----GLSTKLIPVTTAEYGLSKAARPFNSRLDKSKLLEQGFQPLP 299 Query: 278 TWKEGVRNILVNI 290 W++ + L + Sbjct: 300 DWRDALSRYLSEL 312 >gi|71276344|ref|ZP_00652621.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Dixon] gi|71162806|gb|EAO12531.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Dixon] Length = 302 Score = 301 bits (772), Expect = 8e-80, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 158/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGRGCVQADFGQPETLRPLLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 60 PVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGTS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 120 PYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATSE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE IF Sbjct: 180 CLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEIF 235 Query: 231 WESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 236 AQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVLD 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|152994872|ref|YP_001339707.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] gi|150835796|gb|ABR69772.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] Length = 291 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 110/293 (37%), Positives = 164/293 (55%), Gaps = 6/293 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NGQ+ + + + + E+ G ++++ + PD+I+N AA Sbjct: 1 MRILLTGKNGQLGRCFQDLLIGANHELYAYGSDSLNIVDAQQVVDVVQHVKPDIIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + + A+ +N+ G +A A ++ IP I++STDYVFDG S P TN Sbjct: 61 YTAVDKAESDAKNAYLVNSTGPELLAIQAAALDIPFIHVSTDYVFDGKSVEPYLPSDKTN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG SKLAGE V + Y+ILRTAWV+S +GSNF+ +M+RLAK+R E+ VV DQ+ Sbjct: 121 PQGVYGASKLAGERAVTAACEKYIILRTAWVFSEYGSNFVKTMVRLAKDRSELCVVADQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A+AI+ I + + GI+H D P SW FA IF+ + G Sbjct: 181 GCPTYAGDLAKAILHICEQ-CQVGKSLPWGIYHYCGDT-PTSWHGFARAIFYRAEALGVI 238 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + YPT A RP YS + L+ + S W G+ ++L + Sbjct: 239 DKSPQLKAISSDLYPTPAKRPEYSVMSTELLSRI-ELDASFWMAGLFSVLSKL 290 >gi|326692664|ref|ZP_08229669.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc argentinum KCTC 3773] Length = 282 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ Q L + + + + + ++D+ + F + PDV+ + AA Sbjct: 1 MKFLITGANGQLGQELQKLLTERALDFVALSSQELDITDRAAVFATFETVQPDVVFHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +NA G +A AA + + +STDYVFDG S T E P Sbjct: 61 YTKVDLAEDEGRDINWQVNANGTKNVADAAKLVQAKLVAVSTDYVFDGKSLTDYRETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA+ ++SVV DQ Sbjct: 121 NPQNAYGRAKLAGELGVIESGADVYIVRTSWVFGEFGNNFVYTMQRLAQTHPKLSVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + + G +H++ D +W DFA I + Sbjct: 181 LGRPTWTRTLAEFMLHLIAV------NATFGTYHLSNDD-TATWFDFAREILKTT----- 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + ++P KA+RP +S + K T I W+ + L ++ Sbjct: 229 -DVEVTPVTSAEFPQKAYRPKHSVMSLDKAKAT-GFDILNWRAALAQFLASL 278 >gi|302038313|ref|YP_003798635.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] gi|300606377|emb|CBK42710.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] Length = 283 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 157/290 (54%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ ++ G GQ+ L + Q ++ + P DL +D + P+V+I+ A+ Sbjct: 1 MRIVITGAQGQLGTDLRQVL-QGHQLTLLDLPTFDLTH-QDCGRVIVEAVPEVVIHAGAH 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE P +A + NAEG +A+AA +G IYISTDYVFDG P E PTNP Sbjct: 59 TDVDGAERNPALAMAANAEGTERVARAAALVGARLIYISTDYVFDGRGTRPYVETDPTNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG+SK AGE++ + N +++RTAW+Y + G NF+ ++L+LA ER + VV DQ G Sbjct: 119 VSAYGESKRAGEQRALACCENTLVVRTAWLYGLHGRNFVKTILQLASERPCLKVVADQRG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I ++ + S RG+ H+T + G +W +FA I S G Sbjct: 179 CPTFSGDLAGMIGKLLAH-------SARGVLHVT-NAGDCTWHEFATEIVRLS----GRP 226 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T P A RPAYS L +L + + +W++G++ + + Sbjct: 227 VPVEAITTADMPRPAKRPAYSVLSADRLHH-LGFTMPSWQDGLQRFMKAL 275 >gi|224369262|ref|YP_002603426.1| RfbD [Desulfobacterium autotrophicum HRM2] gi|223691979|gb|ACN15262.1| RfbD [Desulfobacterium autotrophicum HRM2] Length = 291 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 156/291 (53%), Gaps = 16/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ Q + + ++ + G D+D+ P +P+V+IN AAY Sbjct: 1 MRILICGGTGQLGQDCTRVFNKNHSVQSFGSRDLDISDPDLVERTIRELAPEVVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 T VD ED + AF +NA GA +A++ ++ ++ISTDYVFDG P E PT Sbjct: 61 TNVDGCEDNRDHAFHVNAVGAENLARSCRTVDALMVHISTDYVFDGKKEPPLTYAETDPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE--ISVVC 176 PLN+YG SKL GE++VA+ +I+RTAW+Y G+NF+ ++L+L E I VV Sbjct: 121 APLNVYGASKLEGEKRVAALLEKQIIVRTAWLYGAQGNNFIKTILKLTLGNPEKTIRVVD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG+PT +++A L + RGIFH TA+ G SW +FA Y + Sbjct: 181 DQFGSPTWT-------LRLALQLERLVEADGRGIFHATAE-GYCSWYEFATYFLKKMDVS 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + T++YP A RP S LD ++L + R++ W+ GV + Sbjct: 233 HN----IIACTTQEYPLPATRPFNSILDNARLKQKNMNRMTGWRHGVDLFV 279 >gi|255263484|ref|ZP_05342826.1| dTDP-4-dehydrorhamnose reductase [Thalassiobium sp. R2A62] gi|255105819|gb|EET48493.1| dTDP-4-dehydrorhamnose reductase [Thalassiobium sp. R2A62] Length = 293 Score = 301 bits (771), Expect = 8e-80, Method: Composition-based stats. Identities = 113/292 (38%), Positives = 158/292 (54%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+A L + +GR D DL P A+ + P +IN AA+T Sbjct: 7 RILVFGKTGQVATELRQRAGTN----CLGRADADLSDPAACAATIRAHHPTAVINAAAFT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E +A INAE A+A A +GIP ++ISTDYVFDG P + T+P Sbjct: 63 AVDQAEAEEPLAHVINAEAPSAMALACAELGIPFLHISTDYVFDGSGTAPWNPSDATSPQ 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG++KLAGE V + + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 123 NAYGRTKLAGEVAVRAAGGTHAILRTSWVFSAHGANFVKTMLRLSETRDALNVVHDQIGG 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRG---IFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A IA A++ +A +IE + + G +H + SW +FA IF + G Sbjct: 183 PTPAADIADALLIMARAMIEGATDATGGTASTYHYAGN-PATSWENFASEIFGTA----G 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ L I W+ + +I+ + Sbjct: 238 RPVSVTGIPTADYPTPAARPLNSRLDCASLQADFGISPPDWRAALADIIPTL 289 >gi|148544280|ref|YP_001271650.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri DSM 20016] gi|184153657|ref|YP_001841998.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri JCM 1112] gi|227364999|ref|ZP_03849039.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM2-3] gi|325681689|ref|ZP_08161209.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM4-1A] gi|148531314|gb|ABQ83313.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri DSM 20016] gi|183225001|dbj|BAG25518.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri JCM 1112] gi|227069969|gb|EEI08352.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM2-3] gi|324979001|gb|EGC15948.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri MM4-1A] Length = 281 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + V +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGVAYDAFDSNQMDITDQVVVNEKISALEPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKKVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + NY I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKVIQETLANYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ + SW +FA I + Sbjct: 183 GRPTWTRTLAEFMTYLVDH------NQPFGTYQLSNENS-CSWYEFATEILKD------K 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + YP KA+RP +S + K +T I W+ + + I Sbjct: 230 DVEVAPVDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVDWQTALGEFMGEI 279 >gi|116629770|ref|YP_814942.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri ATCC 33323] gi|282851771|ref|ZP_06261134.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri 224-1] gi|311110587|ref|ZP_07711984.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri MV-22] gi|116095352|gb|ABJ60504.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri ATCC 33323] gi|282557013|gb|EFB62612.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri 224-1] gi|311065741|gb|EFQ46081.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri MV-22] Length = 328 Score = 301 bits (771), Expect = 9e-80, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 156/325 (48%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDRVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE V++ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGQTKLGGEEAVSNTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|319942932|ref|ZP_08017215.1| dTDP-4-dehydrorhamnose reductase [Lautropia mirabilis ATCC 51599] gi|319743474|gb|EFV95878.1| dTDP-4-dehydrorhamnose reductase [Lautropia mirabilis ATCC 51599] Length = 308 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 99/308 (32%), Positives = 151/308 (49%), Gaps = 20/308 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +V G GQ+ L E++ V D+DL + PDV++NPAA+ Sbjct: 1 MKFVVTGTTGQVGWELVRALQPLGEVVPVSIDDLDLTDAEATRRLLDRVKPDVVVNPAAH 60 Query: 61 TAVDKAEDEP-EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAE E E+A +NA+ +A + G ++ STDYVF+G P E T Sbjct: 61 TAVDKAETEQQELARVLNADVPAVLADWCKAHGALLVHYSTDYVFNGEGTRPWKEDDATA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG +KLAGE+ + ++ILRT WVYS+ G NFL +M+RLA R + VV DQ+ Sbjct: 121 PLNVYGATKLAGEQAIQKSGCAHLILRTCWVYSLHGGNFLKTMVRLASSRDHLKVVADQY 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAE---YIFWESAE 235 G PT A IA ++ + GI ++ A G +W +A+ + E+ Sbjct: 181 GVPTPASFIADVTAELIRRRSFDPKLADWSGILNL-APSGETTWHGYAQTGLKLLHEATL 239 Query: 236 RGG--------------PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 G + + ++P + RP+ S LD S++ +R+ W E Sbjct: 240 AAGENTAQRPRPEWQVPRMPTLEAVPATEFPVPSKRPSNSRLDLSRIQQVWGLRMPPWDE 299 Query: 282 GVRNILVN 289 ++ +L + Sbjct: 300 LLKTVLRD 307 >gi|242400019|ref|YP_002995444.1| dTDP 4-dehydrorhamnose reductase [Thermococcus sibiricus MM 739] gi|242266413|gb|ACS91095.1| dTDP 4-dehydrorhamnose reductase [Thermococcus sibiricus MM 739] Length = 287 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 146/296 (49%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG NGQ+ L + D E++ + D+D+ PDVIIN A Sbjct: 1 MRVAIIGANGQLGSDLVEVFGSDSSFEVVPLTHSDLDVTILDTLE-VLKKLKPDVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF +NA GA +A+ A+ I +YISTDYVFDG P E Sbjct: 60 AYVRVDDAELYPEKAFQVNAIGALNVARVAEEIDAVNVYISTDYVFDGSKGEPYTEEDIP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK AGE +Y+ + I+R A +Y S G NF+ M++ AK EI Sbjct: 120 NPINVYGLSKYAGEIFTKNYSRKHYIIRVASLYGKAGASGKGGNFVEFMVQKAKRGEEIR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQF +PT +AR + ++ E G++HM D G SW +F + IF Sbjct: 180 VVDDQFMSPTYTKDVARTLKKLLELKPE------FGVYHMVND-GFCSWYEFTKAIF--- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G V I + + A RP +S L +L +++ W+ ++ L Sbjct: 230 -EILGWEVDVRPIKSDELKRLAKRPRFSALRNKRLEG-LGLKMRPWRSALKEYLRE 283 >gi|257092762|ref|YP_003166403.1| dTDP-4-dehydrorhamnose reductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045286|gb|ACV34474.1| dTDP-4-dehydrorhamnose reductase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 300 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/299 (34%), Positives = 152/299 (50%), Gaps = 12/299 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVII 55 MK L+ G GQ+ L +++ + D A +PDVI+ Sbjct: 1 MKILLFGKRGQVGWELQRSLAPLGQVVALDCEGDGSLCGDFSNLAGLAVCVREVAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+TAVDKAE EP++A +INA +A+ A +G ++ STDYVFDG TP E Sbjct: 61 NAAAHTAVDKAEAEPDLASTINARAPAVLAEEAARLGAWLVHYSTDYVFDGSGETPWLET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL +YG++KLAGE + + ++I RT+WVY+ G+NF +MLRLA ER + V+ Sbjct: 121 DTPAPLGVYGQTKLAGELAIGHRCDKHLIFRTSWVYAARGNNFARTMLRLAAERDHLRVI 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G PT A +A + + + + G++H+ A GG SW +A ++ ++ Sbjct: 181 ADQIGAPTGAELLADVTAHAIRSARQRPELA--GLYHLAA-GGETSWHGYARHVVEQARR 237 Query: 236 RGGP----YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V + YP A RPA S LD KL + + + W+ GV +L I Sbjct: 238 AGQPIRVAAEAVEAVPASAYPLPAPRPANSRLDTGKLRSAFALNLPDWQSGVDRMLEEI 296 >gi|150376858|ref|YP_001313454.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] gi|150031405|gb|ABR63521.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] Length = 300 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 121/292 (41%), Positives = 170/292 (58%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +V G GQ+A+SL + + E+I +GRP +DL P + PD++++ A Sbjct: 1 MRIVVTGCKGQLARSLLEQARGLPGTEVILIGRPQLDLTDPPTILAAIEPHRPDLVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A+TAVD+AE EPE AF++NA GA A+A AA S+G P +++STDYVFDG E Sbjct: 61 AFTAVDQAEGEPETAFAVNAFGAEAVAGAAASLGAPVLHVSTDYVFDGSKHGSYAEDDMP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+++YG SKLAGE VA +VILRT WVYS FG NF+ ++LRLA ER EI+VV DQ Sbjct: 121 APVSVYGASKLAGELAVAEANPRHVILRTGWVYSPFGKNFIKTILRLAGEREEIAVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL +A AI+ I+ L + G++H+ G S AD A + S GG Sbjct: 181 WGNPTSALDLADAILGISAQLTRCGRDFVFGLYHLAG-AGTTSRADLARHALSASRAEGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P++ V + T +PT A RP S L +K + W+ V + + Sbjct: 240 PWAHVRDVATSAFPTPARRPTNSSLSSAKFTAAFRWSMPPWQYSVECTVRRL 291 >gi|118587027|ref|ZP_01544458.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni ATCC BAA-1163] gi|118432548|gb|EAV39283.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni ATCC BAA-1163] Length = 289 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 156/286 (54%), Gaps = 16/286 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AA Sbjct: 11 MKYMITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAA 70 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PT Sbjct: 71 YTKVDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPT 130 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ Sbjct: 131 NPKNEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQ 190 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I+ + + G ++++ + G SW DFA+ I Sbjct: 191 VGRPTWTKTLAEFILYLIDHQAA------YGTYNLS-NRGTASWYDFAKEILN------N 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 238 YSLEIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 282 >gi|254458197|ref|ZP_05071623.1| dTDP-4-dehydrorhamnose reductase [Campylobacterales bacterium GD 1] gi|207085033|gb|EDZ62319.1| dTDP-4-dehydrorhamnose reductase [Campylobacterales bacterium GD 1] Length = 276 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 102/278 (36%), Positives = 152/278 (54%), Gaps = 11/278 (3%) Query: 13 AQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 L+ + + + R +D+ + F + D+IIN AAYTAVDKAE + + Sbjct: 2 GSELNELASLYPYDFFFTDRDSLDITDEQSIRDFIDLHNIDIIINCAAYTAVDKAESQKD 61 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 +A +IN + ++A+ + I I+ISTDYVF G + P E T P ++YG SKL Sbjct: 62 MADAINHKAVKSLAQISKEKNIKLIHISTDYVFSGQNYKPYIETDFTAPNSVYGSSKLDA 121 Query: 132 EEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 E+ + N +I+RT+WVYS FG+NF+ +MLRL E+ E+ V+ DQ GTPT A +A+ Sbjct: 122 EKALQKINPKNSIIIRTSWVYSSFGANFVKTMLRLGSEKDELGVIFDQVGTPTYARDLAK 181 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 I++I + N I+H + + G +SW DFA+ I + K+ I TK Sbjct: 182 TILEI----LPNVQNENVDIYHYSNE-GVLSWYDFAKEIMKMAKR----DCKINPIETKD 232 Query: 251 YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 YPT A+RP YS L+ SK+ NI I WK+ + L Sbjct: 233 YPTPANRPHYSLLNKSKIKQKFNIEIPFWKDSLDACLK 270 >gi|14590335|ref|NP_142401.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus horikoshii OT3] gi|3256820|dbj|BAA29503.1| 290aa long hypothetical dTDP-4-dehydrorhamnose reductase [Pyrococcus horikoshii OT3] Length = 290 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 99/296 (33%), Positives = 146/296 (49%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG NGQ+ L + + E++ + D+D+ P+ PDV+IN A Sbjct: 4 MRIAIIGANGQLGTDLVEVFGNDPEFEVVPLTHKDLDVTIPESL-KVLKEIKPDVLINTA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++NA GA +A+ A+ I +YISTDYVFDG P E Sbjct: 63 AYVRVDDAELYPEKAFAVNAIGALNVARIANEIDAVNVYISTDYVFDGEKGEPYTEEDVP 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK GE +Y+ + I+R A +Y S G NF+ ++ AK E+ Sbjct: 123 NPINVYGVSKYTGEIFTRNYSPKHYIIRVASLYGKAGASGKGGNFVEWVIEKAKHGEELK 182 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQF +PT +AR + + E G++HM + G SW +F E IF Sbjct: 183 IVDDQFMSPTYTKDVARTLKEFLKLRSE------FGVYHMVNE-GFCSWYEFTEAIFDVL 235 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++ I + + A RP +S L KL +R+ W+E + L Sbjct: 236 ----GWNVEIKPIKSNELNRLAKRPRFSALKNEKLEKI-GLRMRHWREALEEYLKE 286 >gi|289434341|ref|YP_003464213.1| hypothetical protein lse_0974 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170585|emb|CBH27125.1| rmlD [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 276 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 16/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ P+ +I+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKSAVKKAISEVKPEWVIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA S+G +YISTDYVFDG P T Sbjct: 61 FTNVEAAEDELKAVNWEVNVDGTENISEAAASVGAKLVYISTDYVFDGTKEEPYLPEDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKIALEKNKATYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I + GI+ + + G +W DFA I + Sbjct: 181 LGRPTYTYDLADFIRFVIEK------NPAYGIYQFSNN-GTATWFDFATEILKD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++P KA RP S + K+ I TW++ + Sbjct: 228 KDVTVKPCTSDEFPQKAERPKTSIMSLDKVEQ-LGFTIPTWQDALVRF 274 >gi|227824674|ref|ZP_03989506.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus sp. D21] gi|226905173|gb|EEH91091.1| dTDP-4-dehydrorhamnose reductase [Acidaminococcus sp. D21] Length = 309 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 34/312 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRP------------------DIDLLKPKDF 42 K V G NGQ+ + + + +E + G +D+ K Sbjct: 5 KVFVTGVNGQLGHDVMNELAGRHIEAVGCGTSPVYKGIRNGSPVEKMPYIQLDITKKDQV 64 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIST 100 PD +I+ AA+TAVD AE+ IA ++N +G IA+ +G +YIST Sbjct: 65 NEAMEKVHPDAVIHCAAWTAVDAAEEPENIAKVRAVNVDGTRFIAEVCKKLGAKMLYIST 124 Query: 101 DYVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 DYVF+G TP D +PLN+YG+SKL GE V+S + Y I+R AWV+ + G+NF+ Sbjct: 125 DYVFNGKGTTPWDPDCKEYDPLNVYGQSKLDGEFTVSSLLDKYFIVRIAWVFGLNGNNFV 184 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 +ML++ K +E+ VV DQ G PT +A ++ + T G +H T +GG Sbjct: 185 KTMLKVGKTHKELRVVNDQIGAPTYTFDLACLLVDMIQ-------TDNYGYYHATNEGGY 237 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIST 278 +SW +FA+ IF +++ +KV + T++Y +KA RP S L+ KL ++ R+ + Sbjct: 238 ISWNEFAKEIFRQASY----STKVIPVTTEEYGMSKARRPFNSRLETKKLQDSGFNRLPS 293 Query: 279 WKEGVRNILVNI 290 WK + + + Sbjct: 294 WKSAISRYIHEL 305 >gi|302671937|ref|YP_003831897.1| dTDP-4-dehydrorhamnose reductase RfbD1 [Butyrivibrio proteoclasticus B316] gi|302396410|gb|ADL35315.1| dTDP-4-dehydrorhamnose reductase RfbD1 [Butyrivibrio proteoclasticus B316] Length = 289 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 112/299 (37%), Positives = 165/299 (55%), Gaps = 23/299 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDIDLLKPKDFASFFLSFSPDVII 55 K +V G NGQ+ ++++ EI+ G +D+ D P II Sbjct: 3 KIIVTGCNGQLGRAINKELNGKYEIVNTDVFEGAGITPLDITNVDDVIRLAREVKPSAII 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDK E + ++++ INA G +A A+ +G +++STDYVF+G P EF Sbjct: 63 NCAAYTAVDKQESDVDLSYKINAIGPRNLAIASTEVGAKLVHVSTDYVFEGNGTRPYVEF 122 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T P+++YGK+KLAGEE V +++ Y I+RTAW+Y G NF+ +ML L+++ EISVV Sbjct: 123 DKTGPVSVYGKTKLAGEEFVKQFSDKYFIVRTAWLYGD-GKNFVKTMLGLSEKMDEISVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ GTPTSA ++A+AI + T+ G+FH T + G +WADF + IF + Sbjct: 182 MDQQGTPTSAKELAKAIAYL-------FPTNNYGVFHGTCE-GSTNWADFTDEIFRIA-- 231 Query: 236 RGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +KV + T QY P A RPAYS L+ L T + + W + + L + Sbjct: 232 --GKSTKVNHVTTAQYLEKNPQAAPRPAYSILENYMLKLTSDYMFADWHDAIEEYLKEL 288 >gi|116754263|ref|YP_843381.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta thermophila PT] gi|116665714|gb|ABK14741.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta thermophila PT] Length = 281 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 142/290 (48%), Gaps = 13/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ L + ++ + D+ PDVIIN AAY Sbjct: 1 MRILIFGAEGQLGTELCRVL-GHHDLAPFSHIEADVADLGAVLRQTERIRPDVIINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E + A +NA GA A AA G ++ISTDYVFDG P E+ P NP Sbjct: 60 TDVDGCESARDKAVLVNAIGARNAAIAARRAGAKFVHISTDYVFDGKKDGPYVEYDPPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKL GE V + ILR AW+Y G NF+ +ML LA+ R E+ VV DQ G Sbjct: 120 LNVYGWSKLLGERMVLEQNPDSFILRVAWLYGPAGRNFVKTMLSLARARDELRVVNDQRG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A I + +T G++H T+ G +W +FA IF G Sbjct: 180 TPTFAGDVANQIDLLI-------ETESYGLYHCTSQ-GECTWYEFAVEIF----RLLGMD 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T ++P A RPA S LD L + W++ +R+ + + Sbjct: 228 LRVVPVSTSEFPRPARRPANSVLDNLLLRVQGMDIMPHWRDSLRDHISEV 277 >gi|170729451|ref|YP_001774884.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M12] gi|167964244|gb|ACA11254.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa M12] Length = 302 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 123/302 (40%), Positives = 158/302 (52%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGRGCVQADFDRPETLRPLLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 60 PVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGTS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P P PLNIYG SKLAGE V + +ILRT+WVY+ G NFL +MLRL Sbjct: 120 PYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSWVYAAHGHNFLRTMLRLGATSE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ GTPT+A IA Q+ L+E + GI+H+TA G SW FAE IF Sbjct: 180 CLRVVADQIGTPTAAGLIADVTAQL---LVEQVQSRHAGIWHLTA-AGQTSWHGFAEEIF 235 Query: 231 WESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++ G +V I + YPT A RP YSCLD + L I + W++GVR +L Sbjct: 236 AQAQACGLMMRVPQVQAIGSVVYPTAARRPGYSCLDTTALVEAFGIVLPDWRQGVRGVLD 295 Query: 289 NI 290 I Sbjct: 296 EI 297 >gi|19550672|gb|AAL91484.1|AF479753_5 putative dTDP-4-keto-L-rhamnose reductase RmlD [Lactobacillus gasseri] Length = 333 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 156/325 (48%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ K Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAKA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDSPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|194016228|ref|ZP_03054842.1| dTDP-4-dehydrorhamnose reductase [Bacillus pumilus ATCC 7061] gi|194011701|gb|EDW21269.1| dTDP-4-dehydrorhamnose reductase [Bacillus pumilus ATCC 7061] Length = 284 Score = 300 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ + LS + D+ +I + R +++ + F P+++++ AA Sbjct: 1 MKVLITGAGGQLGKELSRQLKEKDITVIALTRSMLNIADQQAVRHAMRHFRPNIVVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT+VD+ E E E A+ +N GA A A +IG +++STDYVFDG + TP + + Sbjct: 61 YTSVDQCETETEKAYLVNGIGAYYTALEAKNIGADVLHVSTDYVFDGQADTPYQVDAQPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P IYGKSK GEE + ++ I+RT+W+Y G NF+ ++LRLA+ + + +V DQ Sbjct: 121 PHTIYGKSKKLGEELLHLVSDEVKIIRTSWLYGHEGHNFVNTILRLAETKDHLRIVNDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A AII + GI+H++ + SW DFA I +S G Sbjct: 181 GSPTYTKDVAEAIIHLFDQ--------QAGIYHVS-NRESCSWFDFASEIVTKS----GL 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I T++Y + RPAYS LD + T + WK+ + L Sbjct: 228 STTIEPISTEEYGFQTPRPAYSVLDLQAIEAT-GWKPRHWKDALHEFLQK 276 >gi|86748689|ref|YP_485185.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris HaA2] gi|86571717|gb|ABD06274.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris HaA2] Length = 298 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 139/291 (47%), Positives = 187/291 (64%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+A+SL D++I+ + RP++DL +P+ A + PD ++N AAY Sbjct: 1 MRLAVTGRHGQVARSLLERAPADIDIVPLARPEVDLQQPRAVAEAMAAARPDAVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE E E+A IN GAGA+A AA +GIP +++STDYVFDG P E T P Sbjct: 61 TAVDLAETEAELAHRINEAGAGAVAAAAARLGIPVVHLSTDYVFDGSLSRPYREDDETGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKLAGE VA+ ++ ILRTAWVYS FG NF+ +ML LA+ R E+S+VCDQ G Sbjct: 121 LGVYGASKLAGERAVAAGNPDHAILRTAWVYSPFGKNFVRTMLTLAETRDELSIVCDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENS-DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 P+ AL IA I + NL+ D +LRG+FHMT G WA FAE IF SA+ GGP Sbjct: 181 APSYALDIADGIFTVVRNLLARPDDAALRGVFHMTG-RGDTDWAGFAEAIFACSADAGGP 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V RI T YPT A RPA S LD ++LA H +R+ W++ + + + + Sbjct: 240 AARVKRIATSDYPTAARRPANSRLDTARLAARHGVRLPDWRDSLPSCVDRL 290 >gi|300361536|ref|ZP_07057713.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri JV-V03] gi|300354155|gb|EFJ70026.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus gasseri JV-V03] Length = 328 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 156/325 (48%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ K Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGSSVTKAPYVSLDITDAKA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VNKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PATESGYDKNGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWTDAISRYL 314 >gi|297718754|gb|ADI50278.1| 4-ketoreductase [Streptomyces sp. MK730-62F2] Length = 295 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 141/293 (48%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G +G + + + + E ++ + R +D+ P S PDV++N AA Sbjct: 1 MRWLITGASGMLGRDVVEELTRRGERVVGLDRAALDITSPPAVDSAVREHRPDVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPT 118 YTAVD AE + A IN G +A+A + I++STDYVF G +R TP E T Sbjct: 61 YTAVDDAETDEARALEINGAGPRLLARACAAHEARLIHVSTDYVFSGEARTTPYPEDHRT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE+ V +LRTAW+Y + GSNF+ +M+ L R + VV D Sbjct: 121 GPRTAYGRTKLAGEQAVLEELPGASAVLRTAWLYGVHGSNFVRTMIGLEARRDTLDVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + +A+ I ++ L G+FH T + G +W D A +F G Sbjct: 181 QRGQPTWSADVAQRIAELGPRL----GPEAHGVFHAT-NSGEATWYDLAREVFSLI---G 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +P A RPAYS L + W+ + L I Sbjct: 233 ADPDRVRPTSSAAFPRPAPRPAYSALAHRRWQEIGLPLPRDWRSALHEALPRI 285 >gi|227431061|ref|ZP_03913121.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353181|gb|EEJ43347.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G +GQ+ Q L + + + + +D+ + + F + PDV+++ AA Sbjct: 1 MKYLITGAHGQLGQELQKLLRERGLTFVAYDSKALDITNREVVMATFKAEQPDVVLHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE + + +N EG IA A G + +STDYVFDGL+ E P Sbjct: 61 YTKVDLAEDEGRAVNWQVNVEGTKNIADATKQYGAKLVAVSTDYVFDGLNVGEYRETDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG+ KLAGE V I+RT+WV+ FG+NF+ +M RLA+ +++VV DQ Sbjct: 121 NPKNAYGRGKLAGELAVTESGAAAYIVRTSWVFGEFGNNFVYTMQRLAESHPKLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + + GI+H++ D +W DFA+ I ++ Sbjct: 181 LGRPTWTRTLAEFMLHLIVV------EATYGIYHVSNDE-TATWFDFAKEILKDT----- 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + + ++P KA+RP +S ++ K +T I +W+E + L Sbjct: 229 -TVVVEPVTSAEFPQKAYRPKHSVMNLEKAKST-GFEIPSWREALNKFL 275 >gi|227544135|ref|ZP_03974184.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300909840|ref|ZP_07127301.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] gi|227185882|gb|EEI65953.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300893705|gb|EFK87064.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] Length = 280 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 150/291 (51%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + +D+ + P+VI + +AY Sbjct: 3 KILITGANGQLGSELRNLLDERGGAYDAFDSNQMDITDQAVVNEKISALKPEVIYHCSAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDY+FDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKKVGAKMVYISTDYIFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ + SW +FA I + Sbjct: 183 GRPTWTRTLAEFMTYLVDH------NQPFGTYQLSNENS-CSWYEFATEILKD------K 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + YP KA+RP +S + K +T I W+ + + I Sbjct: 230 DVEVAPVDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVDWQTALGEFMGEI 279 >gi|206561476|ref|YP_002232241.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315] gi|198037518|emb|CAR53455.1| dTDP-4-keto-L-rhamnose reductase [Burkholderia cenocepacia J2315] Length = 307 Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 156/293 (53%), Gaps = 7/293 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L +++ R D+D F + +PD++IN AAYTA Sbjct: 12 ILVTGANGQVGWELVRALQPLGKVVAATRSDVDFADAAAVGRFVETVAPDIVINAAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+EP+ AF++N + A+A+ A + G ++ STDYVFDG + P E PLN Sbjct: 72 VDRAENEPDAAFAVNRDAVRAMARVAAARGSLLVHFSTDYVFDGSKQAPYSESDDIGPLN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE+ VA ++++ RT+WVY+ G NFL +MLRL R +SVV DQ+G P Sbjct: 132 VYGASKLAGEQAVADIGGDWLVFRTSWVYASRGQNFLRTMLRLGTSREALSVVNDQYGAP 191 Query: 183 TSALQIARAIIQIAHNLIE--NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 TSA IA + + + T G++HMTA G +W +FAE IF + Sbjct: 192 TSARTIADLTVHAIAKSLAERRAGTFESGVYHMTA-RGTTTWHEFAEAIFTGARRVSPQC 250 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I +YPTK RP YS LD + + W + + +L Sbjct: 251 DLAIREVTPIPAAEYPTKTPRPTYSVLDNMRFDERFGLYRPQWVDALALVLDE 303 >gi|188993126|ref|YP_001905136.1| hypothetical protein xccb100_3731 [Xanthomonas campestris pv. campestris str. B100] gi|14090388|gb|AAK53464.1|AF204145_4 dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. campestris] gi|167734886|emb|CAP53098.1| rmlD [Xanthomonas campestris pv. campestris] Length = 302 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 111/302 (36%), Positives = 151/302 (50%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDRIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDCAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQDTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ILRTAWVY+ G+NFL +MLR+ ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLILRTAWVYASHGANFLRTMLRVGAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTPT A I I L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPTPA----ALIADITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 236 EEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EV 297 >gi|147677415|ref|YP_001211630.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] gi|146273512|dbj|BAF59261.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] Length = 281 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 148/289 (51%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G G + +++++ + E+I +GR D+D+ S ++ P +++N AA Sbjct: 1 MRVMVAGAGGILGRAVTAEFAGRGAEVIALGRTDLDITDLARVRSAAGTWKPGLVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T VD AE EP AF +N G +A A G ++ISTDYVFDG + Sbjct: 61 CTNVDGAEAEPRRAFLVNGLGPRNLAVACRETGAVLVHISTDYVFDGSKPGTYTVYDEPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG SKL GE+ + + ++RT+W++ G+NF+ ++LR+ +ER VV DQ Sbjct: 121 PLNVYGLSKLWGEKALLCIGGPFYLVRTSWLFGPGGNNFVTTILRIGRERGRARVVNDQQ 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT L +ARAI + S + GI+H+T + G +W FA+ IF ++ G Sbjct: 181 GCPTYTLDLARAIADL-------SASGCYGIYHVT-NQGSTTWYGFAKEIFGQA----GL 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + T + A RP S LD LA T + W++ + + Sbjct: 229 KVDLAACSTVEMKRPARRPKNSVLDPFPLAETIGYLLPPWQDALARYVA 277 >gi|221065025|ref|ZP_03541130.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni KF-1] gi|220710048|gb|EED65416.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni KF-1] Length = 301 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 160/303 (52%), Gaps = 16/303 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL---------LKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R +++ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNSLCGNVGDLQTLAQTIRSVCP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAEGEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDGSGSAA 120 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER Sbjct: 121 RKESDATGPLSVYGRTKLEGEQRIAATNCRHLIFRTSWVYAARGGNFAKTMLRLAQEREA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 181 LSVINDQWGAPTGADLIADVTAHAVRHMSAHEGDG--GLYHLVA-AGETNWHAYASHVIE 237 Query: 232 ESA----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + T +PT A RP S LD KL T + + W++GV +L Sbjct: 238 RAQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERML 297 Query: 288 VNI 290 I Sbjct: 298 REI 300 >gi|313633866|gb|EFS00586.1| dTDP-4-dehydrorhamnose reductase [Listeria seeligeri FSL N1-067] Length = 276 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 141/288 (48%), Gaps = 16/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ P+ +I+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKSAVKKAISEVKPEWVIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA S+G +YISTDYVFDG P T Sbjct: 61 FTNVEAAEDELKAVNWEVNVDGTENISEAAASVGAKLVYISTDYVFDGTKEEPYLPEDAT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKIALEKNKATYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I + GI+ + + G +W DFA I + Sbjct: 181 LGRPTYTYDLADFIRFVIEK------NPAYGIYQFSNN-GIATWFDFATEILKD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++P KA RP S + K+ I TW++ + Sbjct: 228 KDVTVKPCTSDEFPQKAERPKTSIMSLDKVEQ-LGFTIPTWQDALVRF 274 >gi|116491427|ref|YP_810971.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni PSU-1] gi|116092152|gb|ABJ57306.1| dTDP-4-dehydrorhamnose reductase [Oenococcus oeni PSU-1] Length = 283 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 97/286 (33%), Positives = 156/286 (54%), Gaps = 16/286 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AA Sbjct: 5 MKYMITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAA 64 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PT Sbjct: 65 YTKVDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPT 124 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ Sbjct: 125 NPKNEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQ 184 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I+ + + G ++++ + G SW DFA+ I Sbjct: 185 VGRPTWTKTLAEFILYLIDHQAA------YGTYNLS-NRGTASWYDFAKEILN------N 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 232 YSLEIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 276 >gi|91202782|emb|CAJ72421.1| similar to dTDP-6-deoxy-L-lyxo-4-hexulose reductase (Rmld) [Candidatus Kuenenia stuttgartiensis] Length = 288 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 98/296 (33%), Positives = 144/296 (48%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-------IIRVGRPDIDLLKPKDFASFFLSFSPDV 53 MK L+IG+NG + L + E +I I++ + PDV Sbjct: 1 MKILIIGSNGALGWELRNGLPHLSETEKQPLSVICASHSQIEITNASNTFEAIARTMPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA+T VD E A+++NA+GA +A A ++ I+ISTDYVFDG TP + Sbjct: 61 IINCAAFTDVDACETNIGKAYAVNADGAKNVALAGKNLHARVIHISTDYVFDGAKNTPYN 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E PL++YG+SK AGEE V NY I+R + +Y SNF+ +L L E+ +S Sbjct: 121 ETDLPRPLSVYGRSKRAGEEAVQEINGNYTIIRISRLYGQHKSNFVTKILHLGLEKHVVS 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQFG+PT A + A+ + L GI+H+ D G SW ++A IF S Sbjct: 181 VVTDQFGSPTYAADLVHALWYVL-------SLDLHGIYHIAND-GICSWYEWAREIFRLS 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I + + A P S L+C+K ++ W+E + + L Sbjct: 233 ----NIQVSLQSIKAEDFKRAATVPQNSSLNCTKFVQATGHKMRPWQEALEDYLKK 284 >gi|254556202|ref|YP_003062619.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum JDM1] gi|254045129|gb|ACT61922.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum JDM1] Length = 280 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 155/291 (53%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + Q++ + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQEIAFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + + G + ++ D +W DFA+ I ++ Sbjct: 183 GRPTWTRTLAEFMVHLVKT------EAASGTYQLSNDN-TATWYDFAKEILKDT------ 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + ++Q+P KA+RP +S ++ K T +I TW++ + L ++ Sbjct: 230 DVEVAPVTSEQFPQKAYRPQHSVMNLDKAKAT-GYKILTWQDALNEFLKSL 279 >gi|307320267|ref|ZP_07599686.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] gi|306894146|gb|EFN24913.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] Length = 309 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 128/292 (43%), Positives = 177/292 (60%), Gaps = 7/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LV G GQ+ SL + +DVE+ +GRP+ DL +P ++ PD++I+ A Sbjct: 1 MRVLVTGTTGQLVTSLREVAAGSRDVELFAIGRPEFDLTRPIPMREAIIAARPDIVISAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT+VD+AEDEP +A ++N GA +A+AA S+ IP I++S+DYVF G RTP E T Sbjct: 61 AYTSVDRAEDEPALARAVNVMGAACVAEAAASLDIPVIHLSSDYVFSGDDRTPRREDDET 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG +KLAGEE VAS T ++ILRT+WVYS FG+NF+ +MLRLA + +SVV DQ Sbjct: 121 GPRTVYGATKLAGEEAVASITARHIILRTSWVYSPFGTNFVKTMLRLASAQERLSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PTSAL +A AI+ IA G +H+T G +W+ FA ++ S GG Sbjct: 181 YGNPTSALDVAAAILLIATQ----PRQDRFGTYHLTG-TGESNWSGFARHVLAVSRLHGG 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + V I T YPTKA RP S L +K A T R+ W+ ++ I Sbjct: 236 PSAIVDDIATADYPTKARRPRDSRLCTNKFAGTFGWRLPDWQTSTETVVARI 287 >gi|253572899|ref|ZP_04850297.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|251837531|gb|EES65624.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 292 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 104/299 (34%), Positives = 153/299 (51%), Gaps = 19/299 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPD--------IDLLKPKDFASFFLSFS 50 M LV G NGQ+ Q++ + +Q+ I+ +D+ S S Sbjct: 1 MNILVTGANGQLGQAIRAQSHRLQNHNIVFTDVISNDMLETILLDITSEDAVRSVCKSAQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 +VIIN AAYT V+KAE + E+A IN + +A A I I+ISTDYV+D Sbjct: 61 INVIINCAAYTDVEKAETDFEMANLINCDAVRNLATVAKECDITLIHISTDYVYDSRKAA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E +P+N+Y +K AGE + +++ RTAW++S FGSNF+ +MLRL E+ Sbjct: 121 PYVETDEKHPINVYASTKYAGEVAIHEVGCKFILFRTAWMFSGFGSNFMKTMLRLTAEKE 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++VV DQ GTPT A + ++ I +I+ + G ++ T + G VSW DFA I Sbjct: 181 TLNVVYDQVGTPTYAPE----LVSIIFKVIDEDKLDMTGEYNFTNE-GSVSWYDFAVAIN 235 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + S G KV +++Y +K RP YS LD SK+ T I I W + + N Sbjct: 236 YLS----GHNCKVNPCSSEEYGSKVIRPNYSVLDKSKVKKTFGITIPHWLISLEQCINN 290 >gi|218780350|ref|YP_002431668.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans AK-01] gi|218761734|gb|ACL04200.1| dTDP-4-dehydrorhamnose reductase [Desulfatibacillum alkenivorans AK-01] Length = 292 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 139/291 (47%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ GN G + + EI +D+ PD+++N AAYT Sbjct: 5 KILITGNQGLLGTECVRVLYPTHEIHGFSSNILDIRDKSQVEGRIKEIRPDIVVNCAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--PIDEFSPTN 119 VD E + A+ +NA G +A+A G ++ISTDYVFDG+ P E N Sbjct: 65 KVDSCETHFQDAWDVNAIGPENLARAVRKYGGFLVHISTDYVFDGVRSIPHPYTEDDSPN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI--SVVCD 177 PL+ YGKSKLAGEE V S + I+RTAW+Y G NFL +MLRL+KE VV D Sbjct: 125 PLSAYGKSKLAGEEAVRSLCPLHAIVRTAWLYGAAGPNFLKTMLRLSKENPAALRKVVND 184 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QFG+PT A +A+ I + ++ G FH T D G +W + AE + Sbjct: 185 QFGSPTWAYSLAKQIKVLI-------ESGETGTFHAT-DQGYCTWYELAEAFLTLMDVKH 236 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + T+ YPT A RP+ S L+ + + W++ ++ + Sbjct: 237 N----LTPCETRDYPTPARRPSNSILENRRFKELDIDVMPPWQDDLKAFVK 283 >gi|94497767|ref|ZP_01304334.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas sp. SKA58] gi|94422816|gb|EAT07850.1| dTDP-4-dehydrorhamnose reductase [Sphingomonas sp. SKA58] Length = 285 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 156/292 (53%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ + L + D ++ V ++D+ +F PD+I+N AAY Sbjct: 1 MKTLITGAKGQLGRGLQATAPADATLLCVDVDELDITDSVAVGAFVTREKPDLILNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E + A +IN G +A AA S+G +++STD+VFDG + P + T P Sbjct: 61 TAVDRAETEEDAAMAINGIATGTLADAARSVGARFVHVSTDFVFDGRAGIPYAPDAQTAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ YG++KLAGE+ + +I+RTAWVY+ G NF+ +MLRL ER E+ VV DQ G Sbjct: 121 LSAYGRTKLAGEQL---AGPDALIVRTAWVYAPTGGNFVRTMLRLMAERPEVRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT A +A A+ +A + GI H T D G SW DFA I E G Sbjct: 178 TPTYAPGLASALWTMA-------GKGVSGIHHYT-DSGAASWYDFAVAIQEEGLASGLLS 229 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T YPT A RP S LD + + W+ +R ++ I Sbjct: 230 QEARIVPIPTSAYPTPAARPHCSVLDKASTFDALGGPTPHWRANLRVMMQAI 281 >gi|78184212|ref|YP_376647.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9902] gi|78168506|gb|ABB25603.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9902] Length = 295 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 154/296 (52%), Gaps = 10/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L VE+I R ++DL + + PD ++N AY Sbjct: 1 MKILLTGTGGQLGQALLDSKPDAVELISTTRQELDLSNAEACRLAVQKYQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A +INA A A+ D G + +STD+VFDG +P PT P Sbjct: 61 TAVDQAESEPELAHAINAGAPEAFAQELDRQGGRLLQVSTDFVFDGQQGSPYRVDQPTTP 120 Query: 121 LNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 + +YG SK AGE+ + + VILRT+WV G NF +MLRL +ER ++SVV Sbjct: 121 IGVYGTSKAAGEQAIHRIFGANNPQGVILRTSWVMGPVGRNFARTMLRLHRERDQLSVVA 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G P+S L +A A + S T+L I H + D G SW D A I Sbjct: 181 DQVGCPSSTLNLATACWTTIT---QGSQTNLPPIMHWS-DAGAASWYDVAVAIGELGHSL 236 Query: 237 GG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +KV I T YPT A RP YS LDC+ + W+E ++ +L+ + Sbjct: 237 GLVDTPAKVNPITTADYPTPASRPNYSLLDCTTTRAALQLDGQHWQEALKQLLLRV 292 >gi|237737858|ref|ZP_04568339.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] gi|229419738|gb|EEO34785.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium mortiferum ATCC 9817] Length = 470 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 14/288 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ Q + + V+ I ++D+ K + + + +IIN AAY Sbjct: 192 VLLTGANGQLGQGFQKLFDKLGVKYIATDYQELDITNKKKVRKYIENNNFTIIINCAAYN 251 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VDKAE+E E +++NA +A+ + STD++FDG P E NPL Sbjct: 252 NVDKAEEEVEKCYALNAYAPKNLAEICKEKNKIFVTYSTDFIFDGEKEIPYTEEDIPNPL 311 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++Y KSKL GE+ + I+RT+WV+ + +NF ++ +K R + +V DQ + Sbjct: 312 SVYSKSKLEGEKYSLKH-EKSFIIRTSWVFGMGNNNFCKQVINWSKSRDTLKIVDDQVSS 370 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A + T G++H + + G S + AEYI + G Sbjct: 371 PTYSKDLAEFSWDLIQ-------TDKFGLYHFS-NSGEASKYEQAEYILKKIDWNG---- 418 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K+ R T +P KA R YS LD SK+ N +I WKEG+ L Sbjct: 419 KLERAKTDDFPLKAKRAKYSKLDSSKIEKLLNKKIPYWKEGIDRFLEE 466 >gi|322411500|gb|EFY02408.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 284 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 143/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G IYISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLIYISTDYVFDGNKPVGQEWLETDVP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV DQ Sbjct: 122 DPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA+ I Sbjct: 182 HGRPTWTRTLAEFMCYLAENQKA------FGYYHLSNDAKEDTTWYDFAKEILK------ 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 230 GKAVEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKEFYQQ 280 >gi|83955936|ref|ZP_00964447.1| hypothetical protein NAS141_03933 [Sulfitobacter sp. NAS-14.1] gi|83839700|gb|EAP78878.1| hypothetical protein NAS141_03933 [Sulfitobacter sp. NAS-14.1] Length = 288 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 117/290 (40%), Positives = 162/290 (55%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ DV+I + R D+DL P A+ PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGDDVQITALARADVDLTDPATCAAAIDDHEPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A INA+ A+A+A + IP + ISTDYVF G+ TP + PT+P Sbjct: 61 TAVDKAESDAETAQIINADAPAAMARACAARDIPFVSISTDYVFSGVGNTPWEPADPTDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG++K GE + Y +LRT+WV S G+NF+ +MLRL ER +++V +Q G Sbjct: 121 QGVYGRTKRDGEVAIVKAGGRYAVLRTSWVVSAHGNNFVKTMLRLGAEREALTIVANQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +IA+A IA L+ S+ S GI+H + SWADFA IF + Sbjct: 181 GPTGAAEIAQACEIIAKALVSGSEKS--GIYHFSG-APDTSWADFARAIFDAAK----IP 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ I W + + +IL + Sbjct: 234 CAVTDIPSSDYPTPAKRPLNSRLDCTTTEAAFGISRPDWHQSLTHILTQL 283 >gi|16329215|ref|NP_439943.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803] gi|1651695|dbj|BAA16623.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Synechocystis sp. PCC 6803] Length = 280 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 115/280 (41%), Positives = 155/280 (55%), Gaps = 11/280 (3%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 + L+ + R DL +P +F+PD+I+N AAYTAVD+AE EPE+ Sbjct: 2 GRELAIPLSCFGSVQEATRASFDLAQPDVLGEKIRAFAPDIIVNSAAYTAVDRAETEPEL 61 Query: 73 AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 A+++NA AIAK A IG ++ISTDYVFDG +P E TNPL +YG+SK GE Sbjct: 62 AYAVNALAPQAIAKVAKEIGAYVVHISTDYVFDGSQSSPYRETDATNPLGVYGQSKFQGE 121 Query: 133 EKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGTPTSALQIARA 191 +A N++I+RTAWVY + GS NF+ +M+RL KER+++ VV DQ G PT A +A A Sbjct: 122 IAIADSGCNFLIVRTAWVYGVHGSGNFVKTMVRLGKERQKVRVVADQIGGPTWAKDLAEA 181 Query: 192 IIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS--KVYRIFTK 249 I + + GI+H + + G SW DFA IF E G P +V I T Sbjct: 182 IAALTEQRAQ-------GIYHYS-NSGVASWYDFAVAIFEEVENLGIPLKVRQVVPIATA 233 Query: 250 QYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 YPT A RPAYS L K+ T W+ +R +L Sbjct: 234 AYPTPARRPAYSVLSHQKIVETLGSAPPHWRASLRAMLHQ 273 >gi|46202362|ref|ZP_00053324.2| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 296 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 143/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L + + V + R +D+ A+ S +INPAA Sbjct: 1 MDILILGGAGQVGTELQAYPWPEGVRVHAPDRASLDITDEAAVAAALDERSYAAVINPAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE + A+ +NA +A IP +++STDYVFDG + Sbjct: 61 YTAVDKAESDVAAAWRLNALAPAILAAETRKRNIPLVHVSTDYVFDGSGEGFYAPDAAVK 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V + + ILRTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PTSVYGASKAAGEMAVRATNPRHAILRTAWVVSPHRGNFVKTMLRLAAERDRLTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA A + + + + G FH D G +W FA I +A+RGG Sbjct: 181 GCPTSAA-DLAAALATIALRLARGEGAPTGTFHCVND-GATTWCGFARAILAGAAKRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L + + I W+ + +IL + Sbjct: 239 AIPVEGIPTSAYPTPAKRPANSRLSTQSLTDAYGIAPRPWEAALDDILDRL 289 >gi|149913026|ref|ZP_01901560.1| hypothetical protein RAZWK3B_03520 [Roseobacter sp. AzwK-3b] gi|149813432|gb|EDM73258.1| hypothetical protein RAZWK3B_03520 [Roseobacter sp. AzwK-3b] Length = 285 Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 118/290 (40%), Positives = 165/290 (56%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A L++ + + +GR + DL +P+ A+ + P +IN AAY Sbjct: 1 MSLLVFGKTGQVATELAARAP---DAVFLGRTEADLSQPEACAAAITAHRPWAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A +NA+ A+A+A + GIP I+ISTDYVFDG P P P Sbjct: 58 TAVDRAEEEEALAHVVNADAPEAMARACAANGIPLIHISTDYVFDGAGTAPRATTDPVAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGEE +A + +LRT+WV+S G+NFL +MLRL++ R +++V DQ G Sbjct: 118 QNAYGRSKLAGEEAIAQAGGAFAVLRTSWVFSAHGANFLKTMLRLSESRDALNIVDDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A + IA + +D GI+H + VSW +FAE IF + R Sbjct: 178 GPTPAADIAAACLTIAEQM--RADPGKTGIYHFSG-APDVSWKEFAETIFAMAGRR---- 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ I W+ GV ++L ++ Sbjct: 231 VAVGGIPTADYPTPAARPLNSRLDCALTETVFGISRPDWRMGVGSVLKDL 280 >gi|257784809|ref|YP_003180026.1| dTDP-4-dehydrorhamnose reductase [Atopobium parvulum DSM 20469] gi|257473316|gb|ACV51435.1| dTDP-4-dehydrorhamnose reductase [Atopobium parvulum DSM 20469] Length = 299 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 105/308 (34%), Positives = 148/308 (48%), Gaps = 30/308 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPDIDLLKPKDFASFFL 47 M L+ G +GQ+ L + V ++ ++D+ + +++F Sbjct: 1 MHVLITGAHGQLGNELKRLFESGVSEIGPIPEVFVEPDVDYTDADELDITSSEAVSAWFD 60 Query: 48 SF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 DV+IN AA T VD E E AF++NA G +A+A + + +STDYVF G Sbjct: 61 QHERYDVVINCAAATNVDGCESNFEAAFAVNALGPMNLARACSATQTKLVQVSTDYVFSG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 TP E P++ YG+SKLAGE + ++RTAW+Y G NF+ +M L Sbjct: 121 KESTPRTEQDAPYPVSAYGRSKLAGEGLALAANPRTFVVRTAWLYGYVGKNFVATMRTLG 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + EISVV DQ G PTSA +A AI+ IA T GI+H T + G SWADFA Sbjct: 181 AKYPEISVVDDQVGNPTSANDLAHAILCIAA-------TENYGIYHATNE-GTCSWADFA 232 Query: 227 EYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 E I S KV R+ + Q+ P A RPAYS L L +T + W+E Sbjct: 233 EAIMAGS----NLDCKVTRVTSAQWKELHPESASRPAYSSLVNGHLESTIGNCMRPWQEA 288 Query: 283 VRNILVNI 290 + L + Sbjct: 289 LATYLSKV 296 >gi|88604301|ref|YP_504479.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1] gi|88189763|gb|ABD42760.1| dTDP-4-dehydrorhamnose reductase [Methanospirillum hungatei JF-1] Length = 282 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ + +++C + ++ D+D+ K + PD+IIN AA Sbjct: 1 MKILITGANGQLGKDTTNLCRKYGHDVTAWTSKDLDITKYDVVTKTIQNLQPDIIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE E E AF +N G ++ AA+ + ++ STDY+F+G S P + Sbjct: 61 YNAVDLAETEYEKAFLVNGIGPKNLSLAANKVNASLVHYSTDYIFNGKSSRPYTIADHPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG+SKL GE++V + Y ++R +WV+ NF+ +L + + I+VV DQ Sbjct: 121 PLSRYGESKLLGEQEVMRHATRYYLIRVSWVFGSGNINFVKKVLEWSDKSNIITVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A+A + + T G++H T + G S DFA YI + G Sbjct: 181 ASPTYTHDLAKATLDLIQ-------TDQYGLYHCT-NTGHCSRFDFAAYILQQVGWSG-- 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + ++ T A RP +S LD L + +W++ L I Sbjct: 231 --ELIPGKSTEFETPATRPEFSALDNFGLKQVIGYNLPSWQDATERFLKEI 279 >gi|227543969|ref|ZP_03974018.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300909573|ref|ZP_07127034.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] gi|227186051|gb|EEI66122.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri CF48-3A] gi|300893438|gb|EFK86797.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri SD2112] Length = 279 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + V +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDKRGVAYDAFDSNQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA S+G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTRNVAEAAKSVGAKMVYISTDYVFDGTNEGEYEVDAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PRNEYGKAKLAGEKAIQETLVDYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ + SW +FA I + Sbjct: 183 GRPTWTRTLAEFMTYLVDH------DQPFGTYQLSNENS-CSWYEFATEILKD------K 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + YP KA+RP +S + K +T I W+ + + Sbjct: 230 DVEVAPVDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIVNWQTALNKFM 276 >gi|254173036|ref|ZP_04879710.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4] gi|214033192|gb|EEB74020.1| dTDP-4-dehydrorhamnose reductase [Thermococcus sp. AM4] Length = 287 Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK +IG NGQ+ L + E++ + D+D+ + P+VIIN A Sbjct: 1 MKVAIIGANGQLGTDLVKVLRKEPGFEVVPLTHGDLDVTVSETL-GILRKVKPNVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++NA GA +AK A+ IG +YISTDYVFDG P E Sbjct: 60 AYVRVDDAEIYPEKAFAVNAIGALNVAKIAEKIGAINVYISTDYVFDGEKGVPYTEEDVP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SKLAGE +Y+ + I+R A +Y S G NF+ ++ AK ++ Sbjct: 120 NPINVYGTSKLAGEIFTRNYSRRHYIIRVASLYGKAGASGKGGNFVNWVIEKAKRGEKLR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQ +PT L +AR + + E G++HM + G SW +F + IF Sbjct: 180 IVNDQVMSPTHTLDVARTLKEFLKLQPE------FGVYHMVNE-GYCSWYEFTKAIF--- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++ I + + A RP++S L+ +L +++ W+EG+R L Sbjct: 230 -EILGWNVEIEPIKSNELNRLAKRPSFSALENRRLHE-LGLKMPDWREGLREYLKE 283 >gi|332561401|ref|ZP_08415716.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides WS8N] gi|332274200|gb|EGJ19517.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides WS8N] Length = 283 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 164/288 (56%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L+ + +GR + DL P+ A PD +IN AA+TA Sbjct: 2 ILVFGRTGQVARELARQAP---DARFLGRDEADLADPEACARAIREAKPDAVINAAAWTA 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+E +A +N E GA+A+A +GIP + ISTDYVFDG P P PL Sbjct: 59 VDQAEEEEALATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLG 118 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G P Sbjct: 119 AYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A + +A L D S G +H++ G VSWADFA IF ++ Sbjct: 179 TPAADIAAACLAMARGLAARPDLS--GTYHLSG-GPDVSWADFAREIFRQAE----LACL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|124025563|ref|YP_001014679.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL1A] gi|123960631|gb|ABM75414.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL1A] Length = 297 Score = 298 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 104/295 (35%), Positives = 151/295 (51%), Gaps = 5/295 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ Q++ VE+I R ++DL + PD +IN AY Sbjct: 1 MKVLLTGASGQLGQAIIKSKPSFVELIATTRRELDLADDEACRRAVRQHQPDWVINSGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAEDE E+A SIN A+ G + +STD+VFDG P P Sbjct: 61 TAVDKAEDEKELAMSINTIAPKMFAEELSQTGGKLLQLSTDFVFDGEQNFPYKTGQKKKP 120 Query: 121 LNIYGKSKLAGEEK---VASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG +K AGE+ V +N +I+RT+W++ G NF+ +M+RL + + EI VV D Sbjct: 121 LGVYGATKAAGEDAIYDVLGNSNQALIIRTSWLFGAVGKNFMKTMIRLHRSQEEIRVVSD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A + + L H +D G SW +FA+ I G Sbjct: 181 QIGCPTSTLTLAKACWRAIEKQKDIEPNVLSPQLHHWSDEGSASWYEFAKVIGELGCRIG 240 Query: 238 G--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +KV I +++Y T+A RP YS LDC+ N+ WKE + N++ + Sbjct: 241 LIERPAKVIPISSEEYTTRAKRPKYSILDCTTTRQFLNLEGIHWKESILNVMKQV 295 >gi|223933259|ref|ZP_03625249.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 89/1591] gi|330832509|ref|YP_004401334.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis ST3] gi|223898073|gb|EEF64444.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 89/1591] gi|329306732|gb|AEB81148.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis ST3] Length = 283 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVD AEDE E+ + IN G+ +AKAA +YISTDYVF+G Sbjct: 62 AVDMAEDEGKELNYKINVTGSENVAKAAAKYCATLVYISTDYVFNGDLPVGKEWQVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV DQ Sbjct: 122 DPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A ++ + G +H++ D +W DFA I ++ Sbjct: 182 HGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEILKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +KV + + Q+P KA RP S + K T I TW+E + Sbjct: 232 --NTKVLPVDSSQFPAKAKRPFNSTMSLDKAKAT-GFVIPTWQEALEAFYKQ 280 >gi|84684393|ref|ZP_01012294.1| hypothetical protein 1099457000260_RB2654_12249 [Maritimibacter alkaliphilus HTCC2654] gi|84667372|gb|EAQ13841.1| hypothetical protein RB2654_12249 [Rhodobacterales bacterium HTCC2654] Length = 288 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 122/287 (42%), Positives = 168/287 (58%), Gaps = 7/287 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A+ L++ + V + +GR DL +P+ A +PDV+IN AAY Sbjct: 1 MKALVFGTTGQVARELAATTPKGVRLEALGRDRADLSRPEKCAEAIRHAAPDVVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE++ +A +N E G +A+A ++GIP ++STDYVF G P +PT P Sbjct: 61 TAVDRAEEDEALATVVNGEAPGEMARACAALGIPFFHVSTDYVFSGEGDAPWAVDAPTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE + + + ILRT+WV S G NF+ +MLRL++ R +++V DQ G Sbjct: 121 LNAYGRSKLAGETAIRAAGGPHAILRTSWVVSGHGGNFVKTMLRLSETRDRLTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A+ +A L+ +D S G FH + VSWADFA I +S G Sbjct: 181 GPTPASDIAAALWSMAVALV--ADPSKGGTFHFSG-APDVSWADFAREILRQS----GRT 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V I TK YPT A RPA S LDC +I W+ G+ +IL Sbjct: 234 TVVEDIATKDYPTPARRPANSRLDCRATEAAFDIVRPDWRVGLTDIL 280 >gi|149185656|ref|ZP_01863972.1| dTDP-4-dehydrorhamnose reductase [Erythrobacter sp. SD-21] gi|148830876|gb|EDL49311.1| dTDP-4-dehydrorhamnose reductase [Erythrobacter sp. SD-21] Length = 282 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 155/292 (53%), Gaps = 13/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ ++L ++E+ R +D+ P VI+N AAY Sbjct: 1 MRVLLTGATGQVGKALRHSVPDNIELYPFDRTQLDIANETMVRRIVDRVRPQVILNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE+EP++A ++N + + KAA +I +++STD+VFDG + P T P Sbjct: 61 THVDGAEEEPDLAAAVNTQAVELLVKAASAIDAKLVHVSTDFVFDGEAGRPYRTADKTRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG++K AGE + S +++RTAWVY G NFL +MLRL +ER ++SVVCDQ G Sbjct: 121 KNVYGETKRAGERALRSSD---LLVRTAWVYDNSGRNFLTTMLRLFRERDKVSVVCDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT+A ++ A+ ++ + ++ G H T + G SW DFA I E+ G Sbjct: 178 TPTTASDLSSALWRLI-------EANVGGTQHFT-NSGVASWYDFAVAIAEEARVAGLLD 229 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YPT A RP +S LDC + + S W +R L I Sbjct: 230 HAVDIVPIPSSAYPTLAKRPHFSVLDCHETYRLIGVPASHWHAALRAALKEI 281 >gi|325958675|ref|YP_004290141.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. AL-21] gi|325330107|gb|ADZ09169.1| dTDP-4-dehydrorhamnose reductase [Methanobacterium sp. AL-21] Length = 280 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 12/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK ++IG+ G + L ++ E++ +D+ +PDV+I+ AA Sbjct: 1 MKVMIIGSEGMLGHDLVAVLSPLHEVVTTTIDTLDITDIDKTIKTVKKNNPDVLIHAAAI 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +E P++A+ +NA G +A A +G +YISTDYVFDG + TP +E+ T P Sbjct: 61 TDVDGSESNPDLAYKVNAIGTRNVAVACKEVGASMVYISTDYVFDGTNTTPYNEYDQTKP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YGK+K GE V + + I+RTAW+Y G NF+ +ML LAK ++ISVV DQ G Sbjct: 121 LGVYGKTKHTGETYVRDTLSKFYIVRTAWLYGYHGPNFVTTMLNLAKNTKDISVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A AI I + S GI+H T + SW DFA IF ++ G Sbjct: 181 SPTYTVDLANAISTIINR-------SSYGIYHFT-NTDHCSWFDFATEIFKQA----GVE 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + T+++P A RP YS L+ I +KE +++ + Sbjct: 229 VNLKPVTTEEFPRPAPRPKYSVLNHYSWKMEGYPPIRNYKEALKDYMK 276 >gi|194466816|ref|ZP_03072803.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] gi|194453852|gb|EDX42749.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus reuteri 100-23] Length = 279 Score = 298 bits (765), Expect = 5e-79, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 150/288 (52%), Gaps = 16/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G NGQ+ L ++ + + +D+ + P+VI + AAY Sbjct: 3 KILITGANGQLGSELRNLLDERGIAYDAFDSKQMDITDQAVVNEKISALKPEVIYHCAAY 62 Query: 61 TAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD AED ++ + +NA+G +A+AA +G +YISTDYVFDG + + +PTN Sbjct: 63 TAVDNAEDVAKDLNWQVNADGTHNVAEAAKRVGAKMVYISTDYVFDGTNEGEYEINAPTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YGK+KLAGE+ + +Y I+RT+WV+ +G NF+ +MLRLAK+ +++VV DQF Sbjct: 123 PQNEYGKAKLAGEKAIQETLADYYIIRTSWVFGKYGKNFVYTMLRLAKDHDQLTVVNDQF 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ + SW +FA I + Sbjct: 183 GRPTWTRTLAEFMTYLVDH------DQPFGTYQLSNENS-CSWYEFATEILKD------K 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + YP KA+RP +S + K +T I W+ + + Sbjct: 230 DVEVAPVDSSAYPAKAYRPRHSVMSLKKAEDT-GFEIIDWQTALNKFM 276 >gi|331004510|ref|ZP_08327980.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae oral taxon 107 str. F0167] gi|330410688|gb|EGG90111.1| dTDP-4-dehydrorhamnose reductase [Lachnospiraceae oral taxon 107 str. F0167] Length = 286 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 149/295 (50%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD----VII 55 M+ LV G GQ+ L + ++++ I + D+D+ K + D II Sbjct: 1 MRVLVTGAKGQLGSDFLCELSNRNIDAIGIDIDDLDITDAKATKEVIEKINADKKLDAII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AAYTAVD A+D + INA+G IA+ A ++ + +YISTDYVFDG P + Sbjct: 61 HCAAYTAVDAAQDNEALVTKINADGTKNIAEVAKALDLSMMYISTDYVFDGEGERPWEPD 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PLNIYG +K GE V Y I+R +WV+ + G+NF+ +MLRL KER +SVV Sbjct: 121 DKRAPLNIYGMAKYKGELYVEELLEKYFIVRISWVFGLHGNNFIKTMLRLGKERGAVSVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT ++R + + T G +H T + G SW +FA IF ++ Sbjct: 181 NDQIGSPTYTPDLSRLLADMIL-------TDKYGRYHATNE-GLCSWYEFACEIFKQAK- 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + + +P KA RP S +D SKL + W++ + L + Sbjct: 232 ---LDVKVTSVSSDAFPVKAKRPHNSRMDKSKLTENGFELLPAWQDALSRYLSEL 283 >gi|170017544|ref|YP_001728463.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc citreum KM20] gi|169804401|gb|ACA83019.1| dTDP-4-dehydrorhamnose reductase [Leuconostoc citreum KM20] Length = 279 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 16/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L+ G NGQ+ Q L +C + D++ + +D+ + F PDV+ + AA Sbjct: 1 MTYLITGANGQLGQELQKLCNERDIDFVAFDSKQLDITDREAVFEAFARVQPDVVYHAAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YT VD AED+ + + +N G +A AA + +STDYVF+G S T E Sbjct: 61 YTKVDLAEDDGRTVNWQVNVNGTKNVADAAHHYQAKLVAVSTDYVFEGTSETAYQETDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP N YG++KLAGE V + I+RT+WV+ FG+NF+ +M RLA+ ++VV DQ Sbjct: 121 NPQNAYGRAKLAGELAVTESGADAYIVRTSWVFGEFGNNFVYTMQRLAESHPRLTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ + N + GI+H++ D +W DFA I + A Sbjct: 181 LGRPTWTRTLAEFMLYLIDN------QANYGIYHLSNDD-VATWFDFAREILKDHA---- 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + ++P KA+RP S + K T I TW+ + L +I Sbjct: 230 --VTVSPVTSAEFPQKAYRPKKSVMSLDKAKAT-GFEIPTWRNALSMFLESI 278 >gi|20092574|ref|NP_618649.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina acetivorans C2A] gi|19917849|gb|AAM07129.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina acetivorans C2A] Length = 269 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 28/288 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L++G NG + L + I++ ++D+ L +P ++IN AAYT Sbjct: 7 KTLILGANGMLGFDLCKAFP---DAIKLTHRELDITNRDQVLESILRINPKLVINAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ ED+ E+AF +N G G IA+A + IG ++ STDYVFDG + E NP+ Sbjct: 64 DVEGCEDQQELAFQVNGYGPGYIAEACNKIGAILVHFSTDYVFDGSKKE-YVESDAPNPI 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 NIYG SKL GE+K+ ++Y I+R +W++ G NF+ +ML+L+ E E+ VV DQFG Sbjct: 123 NIYGHSKLLGEKKIIESMDDYRIIRISWLFGTHGRNFVETMLKLSGEIAEVKVVNDQFGK 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A I ++ GI+H+T D G SW +FA + Sbjct: 183 PTYTVDLAHKISELVEL--------DPGIYHITND-GICSWYEFASSFIRNA-------- 225 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++++P KA RP YS L +K+ + WKE ++ L Sbjct: 226 --VPCTSEEFPRKAKRPKYSVLVNTKIE-----PMRHWKEALKAYLKE 266 >gi|332142155|ref|YP_004427893.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552177|gb|AEA98895.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii str. 'Deep ecotype'] Length = 288 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 108/294 (36%), Positives = 155/294 (52%), Gaps = 14/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +VIGN GQ++ L + +D I +G D D+ K + +PDVIIN AAY Sbjct: 1 MKIVVIGNAGQLSYELVRILGED--TICLGPEDTDITKFDVLSETLSQLAPDVIINAAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE+E E+ +INA +AK G +++STDYVF+G +P P P Sbjct: 59 TAVDKAEEEQELCHAINATAVENLAKYCKKAGAFVVHVSTDYVFNGHKGSPYLPSDPIEP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 YGK+K GE+ + ++RTAWVYS G+NF+ +ML+L ++ +++V+ DQ Sbjct: 119 QGAYGKTKADGEKALLDILPEASCLIRTAWVYSAHGNNFVKTMLKLMADKPQLTVIDDQI 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A A + A N G++H T D G SW DFA I E+G Sbjct: 179 GTPTWAKGLADACVSAAKN-------KTVGVYHWT-DEGVASWYDFALAIQELGLEKGLL 230 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI-RISTWKEGVRNILVNI 290 S V I + QYPT A RP YS LD + W++ + +++ + Sbjct: 231 ESAIPVLPIPSSQYPTPAKRPHYSVLDKQSAREAFATCNPTHWRKQLSSMMDEL 284 >gi|255020602|ref|ZP_05292665.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC 51756] gi|254969987|gb|EET27486.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus caldus ATCC 51756] Length = 302 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 11/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ ++L+ +V+ + + R +D+ A + P VIIN AAYT Sbjct: 13 RVLVTGAGGQVGRALAQTVPAEVDAVFLHRQALDVADAGSVAKALAAHRPQVIINAAAYT 72 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E + A++INA+G +A+AA +G ++ISTD+VF G P PT P+ Sbjct: 73 AVDRAESEADQAYAINAQGPAHLARAARELGAELLHISTDFVFSGSQGQPYRPEDPTAPI 132 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK+AGEE +A+ +ILRT+WVY+ +G NFL +MLRL + R + VVCDQ G Sbjct: 133 NAYGASKVAGEEAIAAILGEQALILRTSWVYAPWGQNFLQTMLRLMENRPLLRVVCDQVG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +A A+ + RGI H T D G SW DFA I E+ G Sbjct: 193 SPTSAHSLAGALWRALAR------PDFRGIQHWT-DAGVASWYDFAVAIQEEALALGLLS 245 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + I + YPT A RPA S LD S+ + W+ +R L Sbjct: 246 RRIPIEAIPSSAYPTPARRPANSQLDKSRSYAALG-AAAHWRVALRETLA 294 >gi|254489469|ref|ZP_05102672.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. GAI101] gi|214041976|gb|EEB82616.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. GAI101] Length = 288 Score = 298 bits (764), Expect = 6e-79, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 154/290 (53%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ + I + R DL P A+ + +PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGNGIRITALDRAAADLTDPAACAAAIDAHAPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + A INA+ A+++A + IP + ISTDYVF G P P +P Sbjct: 61 TAVDKAESDHATADLINAQAPAAMSRACAARDIPFVSISTDYVFSGEGNAPWKPDDPADP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYG +K GE + Y +LRT+W S G+NF+ +MLRL ER +++V DQ G Sbjct: 121 QGIYGGTKRDGEILIEEIGGRYAVLRTSWAVSAHGNNFVKTMLRLGAEREALTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +IA+A + IA L+ + + GI+H + SWADFA IF ++ G Sbjct: 181 GPTGAAEIAQACVTIAQTLVSEPEKA--GIYHFSGTPD-TSWADFARAIFDQA----GIT 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S ++CS I W+ + I+ + Sbjct: 234 CAVTDIPSTDYPTPAKRPLNSRMNCSATTVAFGIARPDWRASLSQIIAQL 283 >gi|42518977|ref|NP_964907.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii NCC 533] gi|41583264|gb|AAS08873.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii NCC 533] Length = 328 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVKPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHEEVKVVSDQVGTPTYTFDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G ++V + T++Y +KA RP S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQA----GYKTRVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWPDAISRYL 314 >gi|147921183|ref|YP_685006.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] gi|110620402|emb|CAJ35680.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] Length = 264 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 28/286 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +++G G + L + + + + D+D+ + +PD +IN AAYT Sbjct: 6 KTVIVGAGGMLGTDLRAAFP---DALAITHKDMDITDREAVMRAIRKAAPDAVINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD EDE E A++IN G +A+A +G ++ STDYVFDG SR E TNP+ Sbjct: 63 NVDGCEDEQEKAYAINGLGPAYLAEACKEVGATLVHYSTDYVFDG-SRPEYRESDATNPI 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YGKSKLAGE+ V ++Y I+RT+W++ G NF+ ++L L+K+ + VV DQ G Sbjct: 122 SVYGKSKLAGEKNVQYNMDDYRIVRTSWLFGRHGKNFVDTILSLSKQMPTVKVVNDQVGK 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A ++ T GI+H++ + G SW +FA + Sbjct: 182 PTYTVDLAEKTKELI--------TLPAGIYHISNE-GVCSWFEFASAFIDNA-------- 224 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 T ++P KA RP YS L +K + + WK+ +R+ L Sbjct: 225 --VPCTTAEFPRKAKRPRYSVLVNTKTS-----PLRHWKDALRDYL 263 >gi|251782163|ref|YP_002996465.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390792|dbj|BAH81251.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 284 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWLETDVP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV DQ Sbjct: 122 DPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLAENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKEFYQQ 280 >gi|227872031|ref|ZP_03990412.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sinus F0268] gi|227842123|gb|EEJ52372.1| dTDP-4-dehydrorhamnose reductase [Oribacterium sinus F0268] Length = 305 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 95/313 (30%), Positives = 154/313 (49%), Gaps = 34/313 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD------------------IDLLKPKD 41 M+ V G NGQ+ + + + +E + G +DL ++ Sbjct: 1 MRVFVTGVNGQLGHDVMNELARRGIEAVGSGIEPEYVGIMDGSPVCTMPYVGLDLTNEEE 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 D +I+ AA+TAVD AED + + F IN E G++AK + +Y+S Sbjct: 61 ARRILTEEKIDCLIHCAAWTAVDDAEDPEKRDFVFRINGEVPGSLAKVMKDLKGKMLYLS 120 Query: 100 TDYVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVF G P +E +P+N+YG SKLAGEE + + I+R AWV+ + G NF Sbjct: 121 TDYVFSGEGTKPWEEEERDFHPINVYGASKLAGEEAIRKVLPEHFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML++ K+ + VV DQ G+PT L +AR ++ + +T G +H T +G Sbjct: 181 IKTMLQVGKKHPSVRVVSDQVGSPTYTLDLARLLVDMV-------ETEKYGTYHATNEGE 233 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRIS 277 +SW DF + I+ E+ G ++V + T++Y ++A RP S L KL + Sbjct: 234 YISWYDFTKAIYEEA----GLSTEVIPVTTEEYGLSRARRPFNSRLSKEKLKREGFQGLP 289 Query: 278 TWKEGVRNILVNI 290 WK+ ++ L + Sbjct: 290 HWKDALKRYLQAL 302 >gi|171319431|ref|ZP_02908537.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171095360|gb|EDT40339.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 307 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 112/293 (38%), Positives = 156/293 (53%), Gaps = 7/293 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+ L ++ R ++DL P F PD+++N AAYTA Sbjct: 12 ILVTGANGQVGWELVRALQPLGRVVAATRRNVDLQDPVAVGLFIEKVEPDIVVNAAAYTA 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AED+ AF++N + ++A AA + G I+ STDYVFDG +TP E +PLN Sbjct: 72 VDRAEDDVVTAFAVNRDAVASLASAAAARGSLLIHFSTDYVFDGSKQTPYSESDGVHPLN 131 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG SKLAGE+ +A ++++ RT+WVY G NFL +MLRL R +SVV DQ+G P Sbjct: 132 VYGASKLAGEQAIADIGGDWLVFRTSWVYGARGQNFLRTMLRLGASREVLSVVNDQYGAP 191 Query: 183 TSALQIARAIIQIAHNLIE--NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 TSA IA + + T GI+HMTA G +W FAE IF + Sbjct: 192 TSARTIADLTAHAIAKALAERQAGTFESGIYHMTA-RGMTTWHAFAEAIFDGARHLSPQS 250 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I +YPTK RPAYS LD ++ +R W++ + +L Sbjct: 251 ELAIRQVNPIPAAEYPTKTPRPAYSVLDNARFDARFRLRRPEWRDALALVLDE 303 >gi|254500084|ref|ZP_05112236.1| dTDP-4-dehydrorhamnose reductase [Labrenzia alexandrii DFL-11] gi|222441382|gb|EEE48060.1| dTDP-4-dehydrorhamnose reductase [Labrenzia alexandrii DFL-11] Length = 298 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 110/290 (37%), Positives = 156/290 (53%), Gaps = 4/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ SL ++ + E++ R +IDL +SF D II+ AY Sbjct: 3 RILITGGTGQVGGSLGNLNWPEGTELVLPSRSEIDLGNADQISSFVRDGGFDAIISSGAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ AF +N A A+ A + IP ++ISTDYVF+G E P +P Sbjct: 63 TAVDKAEDDLLTAFKVNGLAPAAFAETAKELDIPVVHISTDYVFNGGKIGRYVETDPIDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SK AGE + S +VILRTAWV+S G+NF+ +M+RLA +R +++VV DQ G Sbjct: 123 QGVYGASKAAGELAIQSSGCRHVILRTAWVFSAIGANFVKTMIRLA-DRPQLTVVDDQTG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A IARA + + + D + G++H D V+W FA IF R Sbjct: 182 CPTAAPDIARAAQAVVLRQLTDRD-APSGVYHFCGDE-AVTWFGFASEIFRLLEARSLAV 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+ YPT A RPA S LD S+L I W+ + + + + Sbjct: 240 PAVAPIPTRDYPTPAKRPANSALDTSRLTQDFGIEPCQWRVALASTVEEL 289 >gi|20502693|gb|AAM22556.1|AF343089_13 putative dTDP-6-deoxy-1-mannose-dehydrogenase [Aeromonas hydrophila] Length = 300 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L++G GQ+ ++L S Q ++ GR + D+ P + + PDVIIN Sbjct: 1 MKILLLGARGQLGRALFSALRQMFPHWQVDAPGREECDITIPDVLCGWIDACRPDVIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE E E+A N + +A+ A + G ++ STDYVFDG P E Sbjct: 61 AAYTAVDEAESEQELADMANHQALLCMAREASNAGALLVHFSTDYVFDGTGARPWRETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YG SK AGE + +++I+RT W+Y G +F ++L A++ + ++VV D Sbjct: 121 PRPLNVYGMSKYAGELAIQRLCPHHLIIRTGWLYGGEGRHFARTILARARQGQALAVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +ARA + ++ + + + G++H+ G SW FA + E+ G Sbjct: 181 QWGAPTQVDWLARASVLALSQVLNSPNKA--GLYHLVC-RGETSWHGFASALVNEAFRLG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V+ I + ++P +A RP S LDC ++ W+E +++ L ++ Sbjct: 238 MLKEQRNVHAIHSDEWPQQARRPLNSRLDCHHFSDLFGTEQPHWQEQMKDWLFSL 292 >gi|323127015|gb|ADX24312.1| dTDP-4-dehydrorhamnose reductase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 284 Score = 297 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 144/292 (49%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERHVDYVAVDVAEMDITDADKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWLETDVP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA++ ++VV DQ Sbjct: 122 DPQTEYGRTKRLGELAVEQYAEHFYIIRTAWVFGNYGKNFVFTMQQLAEKHPRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLAENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---IEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKEFYQQ 280 >gi|313124555|ref|YP_004034814.1| dtdp-4-keto-l-rhamnose reductase rmld [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281118|gb|ADQ61837.1| Putative dTDP-4-keto-L-rhamnose reductase RmlD [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 324 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 104/328 (31%), Positives = 154/328 (46%), Gaps = 49/328 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYKGIADGSAITTAPYVSLDITDAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N G IA A + +P +YIS Sbjct: 61 VEKVIKDVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTNGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVNI 290 LD SKL + TW + V L + Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYLEAL 317 >gi|125654614|ref|YP_001033808.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides 2.4.1] gi|77386274|gb|ABA81703.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides 2.4.1] Length = 283 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 163/288 (56%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L+ + +GR + DL P+ A PD +IN AA+TA Sbjct: 2 ILVFGRTGQVARELARQAP---DARFLGRDEADLADPEACARAIREAKPDAVINAAAWTA 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+E A +N E GA+A+A +GIP + ISTDYVFDG P P PL Sbjct: 59 VDRAEEEEAPATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLG 118 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G P Sbjct: 119 AYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A + +A L D S G +H++ G VSWADFA IF ++ Sbjct: 179 TPAADIAAACLAMARGLAARPDLS--GTYHLSG-GPDVSWADFAREIFRQAE----LDCL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|116511029|ref|YP_808245.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris SK11] gi|116106683|gb|ABJ71823.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris SK11] Length = 313 Score = 297 bits (762), Expect = 1e-78, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 147/294 (50%), Gaps = 20/294 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYT Sbjct: 16 ILITGGNGQLGTELRHLLDERGIAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYT 75 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVDKAEDE E+ IN +G +A+AA +G +YISTDYVF G +P Sbjct: 76 AVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVDAPK 135 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GEE V + Y I+RTAWV+ +G NF+ +M LA E++VV DQ Sbjct: 136 APESEYGRTKHLGEEAVVASGVKYYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVNDQ 195 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD---GGPVSWADFAEYIFWESAE 235 G PT +A ++ + S+ + G +H+T D G V+W DFA+ I ++ Sbjct: 196 HGRPTWTRTLAEFMVYLV------SEKADFGFYHLTNDAASGEDVTWFDFAKEILKDTDV 249 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + ++P KA RP S + K T I TW+E + ++L Sbjct: 250 L------VKPVDSSKFPAKAKRPFNSTMSLEKAKAT-GFVIPTWQEALASMLEK 296 >gi|302556045|ref|ZP_07308387.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes DSM 40736] gi|302473663|gb|EFL36756.1| dTDP-4-dehydrorhamnose reductase [Streptomyces viridochromogenes DSM 40736] Length = 291 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 11/293 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G + ++ + E ++ + R +D+ P+ PD+++N AA Sbjct: 1 MRWLVTGAGGMLGHDVARELTRRGEDVVALDRAALDITTPETVDRAVAGHRPDLVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPT 118 YTAVD AE + A IN EG +A+A + I++STDYVF G +RT P E Sbjct: 61 YTAVDDAETDEARALEINGEGPRLLARACAAHDARLIHVSTDYVFSGEARTDPYAEDHRP 120 Query: 119 NPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE V ++RTAW+Y + G+NF+ +M+ L R + VV D Sbjct: 121 APRTAYGRTKLAGERAVLEELPGRSAVVRTAWLYGVHGANFVRTMIGLEARRDTVDVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + +A I + L G+FH T + G +W + A +F G Sbjct: 181 QRGQPTWSADVAERIADLGVRL----GPGAHGVFHAT-NSGEATWYELAREVFSLV---G 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + +P A RPAYS L + W+ + L I Sbjct: 233 ADPDRVRPTTSAAFPRPAPRPAYSVLAHRRWQRIGLPPARDWRSALHEALPRI 285 >gi|212225002|ref|YP_002308238.1| hypothetical dTDP-4-dehydrorhamnose reductase [Thermococcus onnurineus NA1] gi|212009959|gb|ACJ17341.1| hypothetical dTDP-4-dehydrorhamnose reductase [Thermococcus onnurineus NA1] Length = 288 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ +IG +GQ+ L + +D E+I + D+D+ P+ PDVIIN A Sbjct: 1 MRVAIIGASGQLGTDLVKVFGEDPSFEVIPLTHRDLDVTVPETL-RVLKELKPDVIINTA 59 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD AE PE AF++N GA +A+ A I +YISTDYVFDG P E Sbjct: 60 AYVRVDDAEIYPEKAFAVNTIGALNVARVASEIDAINVYISTDYVFDGEKGEPYTEDDVP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 NP+N+YG SK AGE +Y+ Y I+R A +Y S G NF+ ++ AK E+ Sbjct: 120 NPINVYGASKYAGEIFTRNYSRKYYIIRVASLYGKAGASGKGGNFVNWVIEKAKRGEELR 179 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 +V DQF +PT + +AR + + E G++HM + G SW +F IF Sbjct: 180 IVDDQFMSPTYTMDVARTLREFLEIGPE------WGVYHMVNE-GYCSWYEFTRAIF--- 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +V I + + A RP +S L KL +R+ W+E +R L Sbjct: 230 -EILGWDVEVKPIKSSELNRLARRPRFSALRNEKLERI-GLRMMDWEEALREYL 281 >gi|21672279|gb|AAM74486.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Aeromonas hydrophila] Length = 300 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 156/295 (52%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK L++G GQ+ ++L S Q ++ GR + D+ P + + PDVIIN Sbjct: 1 MKILLLGARGQLGRALFSALRQMFPHWQVDAPGREECDITIPDVLCGWIDACRPDVIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD+AE E E+A N + +A+ A + G ++ STDYVFDG P E Sbjct: 61 AAYTAVDEAESEQELADMANHQALLCMAREASNAGALLVHFSTDYVFDGTGTKPWLETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YG SK AGE + +++I+RT W+Y G +F ++L A++ + ++VV D Sbjct: 121 PRPLNVYGMSKYAGELAIQRLCPHHLIIRTGWLYGGEGRHFARTILARARQGQALAVVDD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +ARA + ++ + + + G++H+ G SW FA + E+ G Sbjct: 181 QWGAPTQVDWLARASVLALSQVLNSPNKA--GLYHLVC-RGETSWHGFASALVNEAFRLG 237 Query: 238 GPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I + ++P +A RP S LDC ++ W+E +++ L ++ Sbjct: 238 MLKEQINVRAIHSDEWPQQARRPLNSRLDCHHFSDLFGTEQPHWQEQMKDWLFSL 292 >gi|120400391|gb|ABM21445.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 328 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 155/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTEAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWPDAISRYL 314 >gi|28377964|ref|NP_784856.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum WCFS1] gi|28270798|emb|CAD63703.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum WCFS1] Length = 280 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 151/291 (51%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + Q++ + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQEIAFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ D +W DFA+ I Sbjct: 183 GRPTWTRTLAEFMAHLVKT------EAASGTYQLSNDN-TATWYDFAKEILK------NT 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + ++Q+P KA+RP +S ++ K T I TW+E + L ++ Sbjct: 230 DVEVAPVTSEQFPQKAYRPQHSVMNLDKAKAT-GYHILTWQEALSEFLESL 279 >gi|239931310|ref|ZP_04688263.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] gi|291439684|ref|ZP_06579074.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] gi|291342579|gb|EFE69535.1| dTDP-4-dehydrorhamnose reductase [Streptomyces ghanaensis ATCC 14672] Length = 307 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 8/290 (2%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G G + Q L+ + + R +DL + P V++N AA+T Sbjct: 14 WLVTGAGGMLGQDVLARLAAAGERTTALDRAALDLTDADAVRRALQNHRPAVVVNCAAWT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE A +IN +G +A A G +++STDYVF G + P E +PT P Sbjct: 74 AVDDAETREAEALAINGDGPAHLADACARTGAVLLHVSTDYVFAGDATAPYAEDAPTAPR 133 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++KLAGE+ V S + ++RTAW+Y G NF+ +M+RL +R + VV DQ G Sbjct: 134 SAYGRTKLAGEQAVLSTLPDRGYVVRTAWLYGAGGPNFVRTMIRLEGQRETLDVVDDQRG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A ++ + + T+ G++H T+ G +W F IF G Sbjct: 194 QPTWSADLAGLLLVLGRAALAG--TAPAGVYHGTS-SGETTWYGFTREIFRL---LGADP 247 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V ++ + A RPAYS L + A + W+E + I Sbjct: 248 DRVRPTTSEAFVRPAPRPAYSVLGHERFAAAGIEPLRDWREALTEAFPEI 297 >gi|120400367|gb|ABM21422.1| sugar biosynthesis protein [Lactobacillus johnsonii] Length = 328 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 155/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQA----GYKNKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWPDAISRYL 314 >gi|73667781|ref|YP_303796.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina barkeri str. Fusaro] gi|72394943|gb|AAZ69216.1| dTDP-4-dehydrorhamnose reductase [Methanosarcina barkeri str. Fusaro] Length = 270 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 153/288 (53%), Gaps = 27/288 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG +G + + + +++ D+D+ + +P+++IN AAYT Sbjct: 7 KTLIIGADGMLGYDICKVYP---NAVKLTHKDVDITDREQVLESIRKINPNLVINAAAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ ED E+A +N G G IA+A +G I+ STDYVFDG + I+ +P +P+ Sbjct: 64 DVEGCEDHQELALKVNGYGPGYIAEACSEVGAALIHFSTDYVFDGSKKEYIESDTPVDPI 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKL GE+K+ N+Y I+R +W++ G NF+ +MLRL+ E ++ VV DQFG Sbjct: 124 NVYGRSKLLGEQKITENLNDYRIIRISWLFGTHGKNFVETMLRLSGEMDQVKVVNDQFGK 183 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +A I++IA GI+H+T + G SW +FA + + Sbjct: 184 PTYTVDLANKIMEIAELGA--------GIYHVTNE-GICSWYEFASAVISNT-------- 226 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++++P KA RP YS L +K + WKE +++ L Sbjct: 227 --IPCTSEEFPMKARRPKYSVLVNTKTK-----PMRHWKEALKDYLKE 267 >gi|94988287|ref|YP_596388.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS9429] gi|94992163|ref|YP_600262.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS2096] gi|94541795|gb|ABF31844.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS9429] gi|94545671|gb|ABF35718.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS2096] Length = 304 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 22 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 81 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 82 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 141 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 142 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 201 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 202 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 252 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 253 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 300 >gi|331000821|ref|ZP_08324467.1| dTDP-4-dehydrorhamnose reductase [Parasutterella excrementihominis YIT 11859] gi|329570349|gb|EGG52082.1| dTDP-4-dehydrorhamnose reductase [Parasutterella excrementihominis YIT 11859] Length = 280 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 98/290 (33%), Positives = 147/290 (50%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK + G +G + L+S +++ GR D+D+ +F PD +IN AA+ Sbjct: 1 MKIWITGASGMLGTELASKLSS-HDLLLTGRSDLDISNENAVLNFCKQNKPDTVINSAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN- 119 T VD E E ++A+ +NA G +A A ++G I ISTDYVF+G S P EF N Sbjct: 60 TNVDACETEKDLAWMVNAWGCRNLALACSTVGSRLISISTDYVFEGDSSRPYHEFDVANG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER-REISVVCDQ 178 +YG++K AGE+ + N++I+R AW+Y G NF+ +ML LA++ EI VV DQ Sbjct: 120 GKTVYGQTKFAGEQFIRQLCPNHLIVRIAWLYGNNGKNFVDTMLSLAEKNLSEIKVVNDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTS + I + T +G+ H T + G +W DFA+ IF S G Sbjct: 180 IGNPTSTSAVTYLIKDLLR-------TDYKGVVHGTCE-GSATWYDFAKTIFELS----G 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + KV +K++ A RP+ S L+ + + WKE + L Sbjct: 228 LHQKVVPCTSKEFVRPAPRPSNSRLEKRVIQMLGLAPMPEWKEELAKYLK 277 >gi|307566286|ref|ZP_07628728.1| dTDP-4-dehydrorhamnose reductase [Prevotella amnii CRIS 21A-A] gi|307344980|gb|EFN90375.1| dTDP-4-dehydrorhamnose reductase [Prevotella amnii CRIS 21A-A] Length = 289 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 13/296 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M LV G NGQ+ + + + + I + +D+ D II Sbjct: 1 MNILVTGANGQLGNEIQLISKKSKDNYIFTDICEGYTHLDITNIDDIRKIVKEKDIRCII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPIDE 114 N AA+T VD AE I ++NA +AKA + I+ISTDYVF TP E Sbjct: 61 NCAAWTNVDSAETAGTIVEALNATAPENLAKAMKEVEGLLIHISTDYVFGADPYNTPCLE 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 P +YG +KL GEEK+ ++I+RTAW+YS FG NF+ +M+ L + +I V Sbjct: 121 NQEGTPTGVYGLTKLHGEEKIKLTKVKHIIIRTAWLYSKFGHNFVKTMINLTANKPQIKV 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ GTPT A +A AI I + + + T GI++ + + G SW DFA I + Sbjct: 181 VFDQCGTPTYAGDLAEAIFNIIEHRLYENHT---GIYNYSNE-GVCSWYDFAIKI---AE 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++ + ++P+K RPAYS LD +K+ +T ++I W ++ + + Sbjct: 234 LSGNTACEILPCHSNEFPSKVKRPAYSVLDKTKIKDTFGLKIPYWVSSLKKCISEL 289 >gi|209883705|ref|YP_002287562.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5] gi|209871901|gb|ACI91697.1| dTDP-4-dehydrorhamnose reductase [Oligotropha carboxidovorans OM5] Length = 303 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 102/296 (34%), Positives = 152/296 (51%), Gaps = 9/296 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ +L S ++ R DL + P++I+N AAYT Sbjct: 5 RILLLGAGGQVGAALQSRLASQGQLTAHDRTSCDLGDLDRLRDAVRAARPNLIVNAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E + INA+ +A+ A + G I+ STDYVFDG T E T PL Sbjct: 65 AVDKAETETALCERINADAPRILAEEARATGAWLIHYSTDYVFDGTKPTAYTENDATAPL 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++KLAG+ + ++ ILR +WVY + G NF ++LRLA E+ E+ +V DQFG Sbjct: 125 NVYGRTKLAGDRAIMDTATDFTILRVSWVYGVRGRNFANTILRLAAEKDELRIVADQFGA 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSL----RGIFHMTADGGPVSWADFAEYIFWESAERG 237 PTSA IA I I D + RG+F++ A G +W +A + E+ +G Sbjct: 185 PTSADLIADTTAGIVRQHIFTKDPAKAAAARGLFNL-APAGRATWHSYALALVREARRQG 243 Query: 238 GPY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P + I QYPT A RP S LD K+ + W++ +++ + + Sbjct: 244 RPLKLSEENILPIPAAQYPTPAKRPQNSMLDTGKIRRLLGHDLPDWQQPLKDFIAH 299 >gi|78213550|ref|YP_382329.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9605] gi|78198009|gb|ABB35774.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CC9605] Length = 294 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 112/294 (38%), Positives = 154/294 (52%), Gaps = 9/294 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + +E++ R ++DL P+ PD ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIACAPDGIELVVTSRQELDLADPEACGGAVKQHKPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A ++NA A A+A D G + ISTD+VF+G P +P Sbjct: 61 TAVDKAESEPELAHAVNAGAPEAFARALDQQGGRLLQISTDFVFNGTQGKPYQPEQARDP 120 Query: 121 LNIYGKSKLAGEEKVAS---YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGE V S +ILRT+WV G NF L+MLRL +ER ++ VV D Sbjct: 121 LGVYGASKAAGEAAVQSIFGARGQGLILRTSWVIGPVGKNFALTMLRLHRERDQLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PTS L +A+A Q L D L + H + D G SW D A + A+ G Sbjct: 181 QVGCPTSTLNLAQACWQ---TLQIAGDRELPAVMHWS-DAGAASWYDVAVAVGQIGADLG 236 Query: 238 GP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V I T YPT A RPAYS LDC+ ++ W++ ++ +L Sbjct: 237 LIDTPAAVQPITTADYPTPAERPAYSLLDCTSTRAALDLNGEHWQQAIKTVLQQ 290 >gi|308234498|ref|ZP_07665235.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] gi|328944091|ref|ZP_08241556.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] gi|327492060|gb|EGF23834.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae DSM 15829] Length = 309 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 99/311 (31%), Positives = 147/311 (47%), Gaps = 33/311 (10%) Query: 1 MK---CLVIGNNGQIAQSLSSMCV-------------QDVEIIRVGRPDIDLLKPKDFAS 44 MK L+ G++GQ+ L + + + D+D+ + + Sbjct: 1 MKPLHILITGSHGQLGCELQRLLSTLQAEIGPVPSEYANAHVDYADLEDLDISDYEAVRA 60 Query: 45 FFLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + P D++IN AA T VD E AFS NA+G +A+ G + +STDYV Sbjct: 61 YIADRDPYDLVINGAAMTNVDGCEQHEAAAFSANAQGPLNLARICAEQGAKLVQVSTDYV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 F G P E P++ YG++KLAGE V + ++RTAW+Y G NF+ +M+ Sbjct: 121 FSGTEARPRTEDDYPCPISAYGRTKLAGEALVLAQNPKSFVVRTAWLYGYVGKNFVQTMI 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 L K +ISVVCDQ G PTSA +A I++IA T GI+H+T + G SW Sbjct: 181 GLGKTHDQISVVCDQMGNPTSANDLAYEILRIAQ-------TQSYGIYHVTNE-GTCSWF 232 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTW 279 DFA I + KV +++Y P A RP YS L+ + LA T + W Sbjct: 233 DFASAIMKHAQ----LACKVVACTSQEYKRMNPQAAQRPCYSSLENAHLAQTIGNEMRPW 288 Query: 280 KEGVRNILVNI 290 + + + +I Sbjct: 289 SDALASYFEHI 299 >gi|94994085|ref|YP_602183.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10750] gi|94547593|gb|ABF37639.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10750] Length = 304 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 22 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 81 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 82 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDCP 141 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 142 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 201 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 202 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 252 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 253 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 300 >gi|281490688|ref|YP_003352668.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis KF147] gi|281374457|gb|ADA63978.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis KF147] Length = 299 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 94/294 (31%), Positives = 147/294 (50%), Gaps = 20/294 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDERGIAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVDKAEDE E+ IN +G +A+AA +G +YISTDYVF G +P Sbjct: 62 AVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVDAPK 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV DQ Sbjct: 122 APESEYGRTKRLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESAE 235 G PT +A ++ + ++ + G +H+T D P V+W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMVYLV------NEKADFGFYHLTNDAAPGEDVTWFDFAKEILKDTDV 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + ++P KA RP S + K T I TW+E + ++L Sbjct: 236 L------VKPVDSSKFPAKAKRPFNSTMSLEKAKAT-GFVIPTWQEALASMLEK 282 >gi|300812677|ref|ZP_07093087.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496337|gb|EFK31449.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 324 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 105/328 (32%), Positives = 156/328 (47%), Gaps = 49/328 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGLADGSSVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + TK+Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTKEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVNI 290 LD SKL + TW + V L + Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYLEAL 317 >gi|300728520|ref|ZP_07061879.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] gi|299774238|gb|EFI70871.1| dTDP-4-dehydrorhamnose reductase [Prevotella bryantii B14] Length = 295 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 24/303 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD--------IDLLKPKDFASFFLSFSP 51 M LV G NGQ+ + + + I + +D+ Sbjct: 1 MNILVTGANGQLGNEMCIVAKNTNDNYIFTDVNEVEGLETTYLDITDIDAIRKMVKEHDV 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAF---SINAEGAGAIAKAADSIGIPCIYISTDYVFD-GL 107 + I+N AA+T VD E + ++A +NA+ +AK + I ISTDYVF Sbjct: 61 NAIVNCAAWTNVDACETDEKLATLAEKLNADAPENLAKVMKEVDGWLIQISTDYVFGKEP 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P P +YG +KL GE+K+ + YVI+RTAW+YS FG NF +ML L Sbjct: 121 YNVPCGPDQKGTPTGVYGTTKLHGEQKIIATGCKYVIIRTAWLYSEFGKNFCKTMLNLTA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + + VV DQ GTPT AL +A AI+ I N G+FH + + G SW DF + Sbjct: 181 TKPALKVVFDQAGTPTYALDLANAIVTILQN-------PQVGVFHFSNE-GVCSWYDFTQ 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G + ++ +YP+ RP+YS LD + T +++ W + + + Sbjct: 233 MI---AKIAGNTDCDIQPCYSSEYPSPVTRPSYSVLDKRTIKETFGVKVPYWVDSLEKCI 289 Query: 288 VNI 290 N+ Sbjct: 290 ANL 292 >gi|104774640|ref|YP_619620.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423721|emb|CAI98712.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 324 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 104/328 (31%), Positives = 156/328 (47%), Gaps = 49/328 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGIADGSAVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVNI 290 LD SKL + TW + V L + Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYLEAL 317 >gi|256843713|ref|ZP_05549201.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus 125-2-CHN] gi|256615133|gb|EEU20334.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus 125-2-CHN] Length = 328 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 149/325 (45%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKAFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYNGVMDGTAVTKMPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVII+ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VNKVITEVNPDVIIHCAAWTAVDMAEDDDKVEAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE+ VA + Y I+R AWV+ I G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGINGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSTHDEVKVVDDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ +++ +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQASY----DTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + V L Sbjct: 290 LDKSKLVENGFKPLPTWPDAVSRYL 314 >gi|257893560|ref|ZP_05673213.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,408] gi|257829939|gb|EEV56546.1| dTDP-4-dehydrorhamnose reductase [Enterococcus faecium 1,231,408] Length = 283 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 97/287 (33%), Positives = 156/287 (54%), Gaps = 17/287 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDEPEIAFS-INAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 VDKAE+E + IN +G +A AA ++ +YISTDYVFDG + TNP Sbjct: 63 VDKAEEEEKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKNKNVEYEVDDQTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG++KL GE+ V +Y I+RT+WV+ I+G NF+ +M RLA+ R +++VV DQFG Sbjct: 123 LNEYGRTKLLGEKAVEEILEDYYIIRTSWVFGIYGHNFVFTMQRLAETRDKLTVVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++ + + + GI+H++ + SW +FA+ I ++ Sbjct: 183 RPTWTRTLAEFMVYVIE------EKAPFGIYHLSNENS-CSWYEFAKEILKDT------D 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + ++++P KA RP YS + K I TW+E + +L Sbjct: 230 VEVAPVTSEEFPQKATRPQYSVMSLKK-TEALGFVIPTWQEALAQML 275 >gi|71903247|ref|YP_280050.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS6180] gi|71802342|gb|AAX71695.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS6180] Length = 304 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 22 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 81 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 82 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 141 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 142 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFAMEQLAENHSRLTVVNDQ 201 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 202 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 252 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 253 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 300 >gi|150020962|ref|YP_001306316.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429] gi|149793483|gb|ABR30931.1| dTDP-4-dehydrorhamnose reductase [Thermosipho melanesiensis BI429] Length = 285 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 17/295 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVII 55 M+ L+ G GQ+ Q + + +E I + +D+ F PDVII Sbjct: 1 MRILITGAYGQLGQDFQKLFDKEGIEYIATDNKEGYKKLDITNLDKVIEFAKKIKPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAY AVDKAE+E ++A++IN +A AA ++ STDYVFDG P + Sbjct: 61 NCAAYNAVDKAEEEWKVAYNINGLSVRNLAIAASLNNSFLVHYSTDYVFDGRKGMPYTIY 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NPL+ YG+SK GE+ ++ + +NY ++RT+WV+ NF ++ +K+ +IS+V Sbjct: 121 DTPNPLSKYGESKYLGEKLLSQFYDNYALIRTSWVFGKGNINFAKKVIEWSKKYEKISLV 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D+ PT + +A+A +I + RG++H++ + S ++ YI Sbjct: 181 IDEISAPTYTVDLAKATWEIIKYRV-------RGLYHISNER-ECSRYEYGRYILERIGY 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +G K+ + + K + A RP YS LD L T ++ WKE V L I Sbjct: 233 KG----KIEKAYQKDFNLPAKRPKYSKLDNFGLCETVGFKMPDWKEAVDRFLKEI 283 >gi|329667486|gb|AEB93434.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii DPC 6026] Length = 328 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVADGTAVTKAPYVSLDITDAAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + P +Y+S Sbjct: 61 VDKVISEVNPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVDGTQNIANVAKKLDAPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP PLN+YG++KL GEE VA+ + Y I+R AWV+ + GSNF Sbjct: 121 TDYVFDGQGTTPWKPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGVNGSNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHEEVKVVSDQVGTPTYTFDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G ++V + T++Y +KA RP S Sbjct: 234 PASEGDHDENGTKTGYISWYDFTKEIYRQA----GYKTRVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + TW + + L Sbjct: 290 LDKSKLEENGFKPLPTWPDAISRYL 314 >gi|94990166|ref|YP_598266.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10270] gi|94543674|gb|ABF33722.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10270] Length = 294 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 12 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 71 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 72 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 131 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 132 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 191 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 192 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 242 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 243 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 290 >gi|317968491|ref|ZP_07969881.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CB0205] Length = 294 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 110/292 (37%), Positives = 156/292 (53%), Gaps = 9/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + C + +E+I GR ++DL + PD +IN AY Sbjct: 1 MKVLLTGAAGQLGQALMAACPEGIELIACGRQELDLADQAACRRIAQAHQPDWVINAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EPE+A ++NA A+A+A G + +STD+VF+G +P P Sbjct: 61 TAVDRAESEPELAQAVNALAPAALAQAQADHGGRLLQLSTDFVFNGQQGSPYRPEQAAEP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG +K AGE V Y+ +LRT+WVY GSNF +MLRL ER ++ VV DQ G Sbjct: 121 LGVYGSTKAAGEAAVLEYSC-ARVLRTSWVYGPVGSNFCRTMLRLLAEREQLGVVADQVG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS L +A+A ++ + + I H + D G SW DFA I G Sbjct: 180 CPTSTLGLAQACWRVLAL-----EDGVLQILHWS-DAGAASWYDFAVAIAELGVTHGLLT 233 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T YPT A RPAYS LDC +++ W+ + +L+ I Sbjct: 234 RVAQVKPIPTADYPTPAQRPAYSLLDCKATREALSLQPQHWRAALEQVLLRI 285 >gi|306827611|ref|ZP_07460891.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes ATCC 10782] gi|304430174|gb|EFM33203.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes ATCC 10782] Length = 304 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 22 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 81 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP--IDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 82 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 141 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 142 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 201 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 202 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 252 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TWKE ++ Sbjct: 253 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWKEALKAFYQQ 300 >gi|14521386|ref|NP_126862.1| dTDP-4-dehydrorhamnose reductase [Pyrococcus abyssi GE5] gi|5458604|emb|CAB50092.1| dTDP 4-dehydrorhamnose reductase (dTDP-L-rhamnose synthetase) [Pyrococcus abyssi GE5] Length = 283 Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 101/294 (34%), Positives = 142/294 (48%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG NGQ+ L + + E I + R D+D+ + P+VIIN AAY Sbjct: 1 MRVAVIGANGQLGTDLVEVFGE--EAIPLTRKDLDVTDFESL-KILKELKPEVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE PE AF +NA GA +A+ A+ IG +YISTDYVFDG P E NP Sbjct: 58 VRVDDAELYPEEAFKVNAIGALNVARIANEIGAINVYISTDYVFDGAKGEPYTEEDIPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y I+R A +Y G NF+ +++ A + E+ +V Sbjct: 118 INVYGASKYIGEIFTRNYSKKYYIIRVASLYGKAGARGKGGNFVEWVIKKANKGEELRIV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQF +PT +AR G++HM + G SW +F IF E Sbjct: 178 NDQFMSPTYTKDVART------LRELLRLRPSFGVYHMVNE-GYCSWYEFTRAIF----E 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V I + + A RP +S L KL +++ WKE + L Sbjct: 227 ILGWDVRVKPINSSELKRLAKRPKFSALKNEKLEKI-GLKMKHWKEALGEYLKE 279 >gi|221634577|ref|YP_002523265.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides KD131] gi|221163450|gb|ACM04412.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides KD131] Length = 283 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 164/288 (56%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L+ + +GR + DL P+ A PD +IN AA+TA Sbjct: 2 ILVFGRTGQVARELARQAP---DARFLGRDEADLADPEACARAIREAKPDAVINAAAWTA 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+E A +N E GA+A+A ++GIP + ISTDYVFDG P P PL Sbjct: 59 VDRAEEEEAPATVVNGEAPGAMARACAALGIPFVQISTDYVFDGSGTRPWQPGDPVGPLG 118 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G P Sbjct: 119 AYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A + +A L D S G +H++ G VSWADFA IF ++ Sbjct: 179 TPAADIAAACLAMARGLAARPDLS--GTYHLSG-GPDVSWADFAREIFRQAE----LACL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLSRPDWRQGLARVLADL 278 >gi|150376941|ref|YP_001313537.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] gi|150031488|gb|ABR63604.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium medicae WSM419] Length = 306 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 125/292 (42%), Positives = 178/292 (60%), Gaps = 7/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK L G GQ+ L+ + V+ DVE+I +GRP+ DL+ P ++ SPDV+++ A Sbjct: 1 MKVLATGTTGQVVTCLTEIAVRLGDVELITIGRPEFDLINPVPLREAIVAASPDVVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AEDEP A ++N GA +A+AA +G+P I++STDYVF G P E T Sbjct: 61 AYTAVDRAEDEPARARAVNVAGAACVAEAAARLGVPLIHLSTDYVFSGDDPGPRKENDQT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +YG SKL GE+ VAS T +VILRT+WVYS FG+NF+ ++LRLAK R +SVV DQ Sbjct: 121 RPRTLYGASKLDGEKAVASITPRHVILRTSWVYSPFGTNFVRTILRLAKSREILSVVSDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSAL +A AI++IA + G++H+ GG +W+DFA +I S GG Sbjct: 181 HGNPTSALDLAAAILEIAR----SRKGDAFGVYHLAGTGG-TNWSDFARHILAVSHLNGG 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P++ + I + YPT+A RP S L K + W++ + ++ + Sbjct: 236 PFATIRGIASADYPTRARRPQDSRLCTDKFEGIFGWCLPPWQDSTKLVVRRL 287 >gi|309378197|emb|CBX23169.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 287 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 161/292 (55%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ +F PD ++N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRIPEDWETIATDSASLDITDADAVCRMIQNFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLASAAHRAHARFIHISTDYVFDGQADKPYLESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYGKSK AGE S + +ILRT+W++S +G NF+ +ML A ER + VV +Q G Sbjct: 121 PNIYGKSKAAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNRADERSSLPVVSNQTG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A +A AII++ + +RGI+H G VSW +FA +IF + + Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----SSPVRGIYHFAG-GKSVSWYEFARHIFQTALRQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + ++YP A RP YS LDC K+ + I+ S W++ + +++ + Sbjct: 235 PIPELKAVSDEEYPAAASRPPYSILDCRKIESGFGIKPSDWQKALSQVVLKL 286 >gi|325142007|gb|EGC64440.1| dTDP-4-dehydrorhamnose reductase [Neisseria meningitidis 961-5945] Length = 278 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 113/284 (39%), Positives = 164/284 (57%), Gaps = 8/284 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A+ L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE AF++NA +A AA I+ISTDY+FDG + P E TNP Sbjct: 61 TAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDYIFDGKGKRPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A AII++ + +RGI+H G VSW +FA++IF ++++ Sbjct: 181 CPTYAGDLAAAIIRLLQQ-----TSPVRGIYHYAG-GKSVSWYEFAQHIFQAASQQQTSF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 P ++ + K+YPT A RPAYS LDC K+ N +I+ S W++ Sbjct: 235 PVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFSIKPSDWQKA 278 >gi|146318950|ref|YP_001198662.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 05ZYH33] gi|146321158|ref|YP_001200869.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 98HAH33] gi|253752020|ref|YP_003025161.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis SC84] gi|253753845|ref|YP_003026986.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis P1/7] gi|253755279|ref|YP_003028419.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis BM407] gi|145689756|gb|ABP90262.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 05ZYH33] gi|145691964|gb|ABP92469.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis 98HAH33] gi|251816309|emb|CAZ51938.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis SC84] gi|251817743|emb|CAZ55494.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis BM407] gi|251820091|emb|CAR46367.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis P1/7] gi|292558604|gb|ADE31605.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis GZ1] gi|319758387|gb|ADV70329.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis JS14] Length = 283 Score = 295 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVD AEDE E+ + IN G+ +AKA +YISTDYVF+G Sbjct: 62 AVDMAEDEGKELNYKINVTGSENVAKATAKYCATLVYISTDYVFNGDLPVGKEWQVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV DQ Sbjct: 122 DPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A ++ + G +H++ D +W DFA + ++ Sbjct: 182 HGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEVLKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +KV + + Q+P KA RP S + K T I TW+E + Sbjct: 232 --NTKVLPVDSSQFPAKAKRPFNSTMSLDKAKAT-GFVIPTWQEALEAFYKQ 280 >gi|23504820|emb|CAD49093.1| dTDP-4-dehydrorhamnose reductase [Streptococcus suis] Length = 278 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 142/290 (48%), Gaps = 18/290 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + V+ + ++D+ +FF P V+ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERGVDYVAADVAEMDITDADKVDAFFAEVKPSVVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVD AEDE E+ + IN G+ +AKA +YISTDYVF+G Sbjct: 62 AVDMAEDEGKELNYKINVTGSENVAKATAKYCATLVYISTDYVFNGDLPVGKEWQVDDQP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P + YG++K GEE V + + + +RTAWV+ +G NF+ +M LA+ R ++VV DQ Sbjct: 122 DPQSEYGRTKRKGEEAVEKFADKFYTVRTAWVFGNYGKNFVFTMQNLAETRDTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A ++ + G +H++ D +W DFA + ++ Sbjct: 182 HGRPTWTRTLAEFMVHLVDT------KQAFGYYHLSNDAAEDTTWFDFATEVLKDT---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +KV + + Q+P KA RP S + K T I TW+E + IL Sbjct: 232 --NTKVLPVDSSQFPAKAKRPFNSTMSLDKAKAT-GFVIPTWQEALEGIL 278 >gi|327184174|gb|AEA32621.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1118] Length = 328 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGVEDGSAVTKMPYVSLDITDADA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VDKVITEVNPDVIVHCAAWTAVDMAEDDDKVEAVRMVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE+ VA + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVDDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQA----GYDTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + V L Sbjct: 290 LDKSKLVKNGFKPLPVWTDAVHRYL 314 >gi|326405777|gb|ADZ62848.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis CV56] Length = 299 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 20/294 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDERGIAYTATDARELDITDGVAVDKFFDENKPELVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVDKAEDE E+ IN +G +A+AA +G +YISTDYVF G +P Sbjct: 62 AVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVDAPK 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV DQ Sbjct: 122 APESEYGRTKHLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESAE 235 G PT +A ++ + ++ + G +H+T D P V+W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMVYLV------NEKADFGFYHLTNDAAPGEDVTWFDFAKEILKDTDV 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + ++P KA RP S + K T I TW+E + N+L Sbjct: 236 L------VKPVDSSKFPAKAKRPFNSTMSLEKAKAT-GFVIPTWQEALANMLEK 282 >gi|50913965|ref|YP_059937.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10394] gi|50903039|gb|AAT86754.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS10394] Length = 284 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 122 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 280 >gi|15672181|ref|NP_266355.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. lactis Il1403] gi|12723053|gb|AAK04297.1|AE006257_7 dTDP-L-rhamnose synthase [Lactococcus lactis subsp. lactis Il1403] Length = 299 Score = 295 bits (756), Expect = 5e-78, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 20/294 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ FF P+++ + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDERGMAYTATDAKELDITDGVAVDKFFDENKPELVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVDKAEDE E+ IN +G +A+AA +G +YISTDYVF G +P Sbjct: 62 AVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVDAPK 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV DQ Sbjct: 122 APESEYGRTKHLGEEAVVASGVKHYIIRTAWVFGSYGPNFVFTMQNLATRFPELTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESAE 235 G PT +A ++ + S+ + G +H+T D P V+W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMVYLV------SEKADFGFYHLTNDAAPGEDVTWFDFAKEILKDTDV 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + ++P KA RP S + K T I TW+E + ++L Sbjct: 236 L------VKPVDSSKFPAKAKRPFNSTMSLEKAKAT-GFVIPTWQEALASMLEK 282 >gi|302337209|ref|YP_003802415.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] gi|301634394|gb|ADK79821.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] Length = 292 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 107/291 (36%), Positives = 159/291 (54%), Gaps = 10/291 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 VIGN G + + LS + + I R ++D+L P I+N +AYT Sbjct: 2 IWVIGNKGMLGRELSDHLSEAGLSFIGTDR-EVDILSSAALEERAAEIHPAWIVNCSAYT 60 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE+E E A S+N +G IAK A S +P I+ISTDYVFDG S TP+ E +P P Sbjct: 61 AVDKAEEEEEAARSLNRDGVAHIAKLAISRKVPLIHISTDYVFDGSSNTPLHEDAPCAPQ 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++KLAGE+++ + N+ I+RTAW+Y +G NF+ +ML L R+EI+VV DQ G+ Sbjct: 121 TAYGRTKLAGEQELRTIWPNHFIIRTAWLYGRYGKNFVDTMLSLMNSRKEITVVNDQTGS 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--P 239 PT + I+ I D + G +H++ + G +W FA I+ ER Sbjct: 181 PTWTRVLTGLILTIIKQ-----DKACYGTYHLSGE-GSCTWYQFAREIYRMGRERTLVSS 234 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V ++Q+PT A RPAYS L K+ + + W++ + + L ++ Sbjct: 235 DCAVTPCSSEQFPTAAKRPAYSLLSKEKIMHAFAYQPPQWQDSLASYLDSL 285 >gi|116514774|ref|YP_813680.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094089|gb|ABJ59242.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 324 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 104/328 (31%), Positives = 156/328 (47%), Gaps = 49/328 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGIADGSAVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVDLAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H+T Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLVDMI-------ETDKYGYYHVTNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVNI 290 LD SKL + TW V L + Sbjct: 290 LDKSKLEKNGFKPLPTWPAAVHRYLEAL 317 >gi|303257177|ref|ZP_07343191.1| dTDP-4-dehydrorhamnose reductase [Burkholderiales bacterium 1_1_47] gi|302860668|gb|EFL83745.1| dTDP-4-dehydrorhamnose reductase [Burkholderiales bacterium 1_1_47] Length = 280 Score = 295 bits (755), Expect = 6e-78, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 15/290 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK + G +G + L+S +++ GR D+D+ +F PD +IN AA+ Sbjct: 1 MKIWITGASGMLGTELASKLSS-HDLLLTGRSDLDISNENAVLNFCKQNKPDTVINTAAF 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN- 119 T+VD E E ++A+ +NA G +A A ++ I ISTDYVF+G S P EF N Sbjct: 60 TSVDACETEKDLAWMVNAWGCRNLALACSTVRSRLISISTDYVFEGDSSRPYHEFDVANG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER-REISVVCDQ 178 +YG++K AGE+ + N++I+R AW+Y G NF+ +ML LA++ EI VV DQ Sbjct: 120 GKTVYGQTKFAGEQFIRQLCPNHLIVRIAWLYGSNGKNFVDTMLSLAEKNLSEIKVVNDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTS + I + T +G+ H T + G +W DFA+ IF S G Sbjct: 180 IGNPTSTSAVTYLIKDLLR-------TDYKGVVHGTCE-GSATWYDFAKTIFELS----G 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + KV +K++ A RP+ S L+ + + WKE + L Sbjct: 228 LHQKVVPCTSKEFVRPAPRPSNSRLEKRVIQMLGLAPMPEWKEELAKYLK 277 >gi|117927625|ref|YP_872176.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus 11B] gi|117648088|gb|ABK52190.1| dTDP-4-dehydrorhamnose reductase [Acidothermus cellulolyticus 11B] Length = 293 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 103/288 (35%), Positives = 156/288 (54%), Gaps = 11/288 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ L + + E++ + R ++D+ + F PDV+IN AAY Sbjct: 3 RWLVTGAGGQLGSDLVDLLQRSGAEVVGLARAELDITDADAVLAACERFHPDVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE +P AF++NAEGAG +A A +G +++STDYVF G + +P DE +P P Sbjct: 63 TAVDAAESDPATAFAVNAEGAGHVAAATAKLGARLVHVSTDYVFAGDATSPYDEEAPVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG+SK AGE V ++RTAWVY G NF+ +M RL +E+ ++VV DQ G Sbjct: 123 RSVYGRSKAAGERAVLEAHPGAYVVRTAWVYGAVGQNFVKTMARLEREKETVTVVDDQRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A A+I +A + + G++H T + G +W FA IF E G Sbjct: 183 SPTWSRDLADALITLARS------DAPPGVYHCT-NAGETTWFGFARAIFEE---LGADP 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++V T +P A RPAYS L + + W++ +R Sbjct: 233 TRVRPTTTAAFPRPAPRPAYSVLGHRRWQQAGLPAMRPWRDALRAAFA 280 >gi|209559156|ref|YP_002285628.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes NZ131] gi|209540357|gb|ACI60933.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes NZ131] Length = 284 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDCP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 122 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 280 >gi|15674829|ref|NP_269003.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes M1 GAS] gi|71910415|ref|YP_281965.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS5005] gi|13621962|gb|AAK33724.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes M1 GAS] gi|71853197|gb|AAZ51220.1| dTDP-4-dehydrorhamnose reductase [Streptococcus pyogenes MGAS5005] Length = 284 Score = 295 bits (755), Expect = 7e-78, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDHP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 122 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 280 >gi|315039054|ref|YP_004032622.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1112] gi|312277187|gb|ADQ59827.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus amylovorus GRL 1112] Length = 328 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG-RPD-----------------IDLLKPKD 41 MK V G NGQ+ + + + E + +P+ +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLKPEYAGVADGSAVTKMPYVPLDITDGDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAVD AED+ E +N G IA A + +P +Y+S Sbjct: 61 VEKVITDVNPDVIVHCAAWTAVDMAEDDDKVEAVRMVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE+ VA + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVADTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGSNHDEVKVVDDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQA----GYDTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + V L Sbjct: 290 LDKSKLVENGFKPLPLWTDAVSRYL 314 >gi|114798649|ref|YP_759508.1| dTDP-4-dehydrorhamnose reductase [Hyphomonas neptunium ATCC 15444] gi|114738823|gb|ABI76948.1| dTDP-4-dehydrorhamnose reductase [Hyphomonas neptunium ATCC 15444] Length = 296 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 112/283 (39%), Positives = 162/283 (57%), Gaps = 4/283 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LVIG++GQ+AQSL +M +D ++ VGRPD DL P A +P +++N YT Sbjct: 8 ILVIGSSGQLAQSLRAMGRED--VVCVGRPDADLADPIKLADLVAKMTPRLVLNAGGYTK 65 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE + AF++N +G +A+ S IP I+ISTD VFDG P P+N Sbjct: 66 VDPAETQTSEAFALNRDGPATLARLCASADIPLIHISTDCVFDGRKEAPYTPEDLAEPIN 125 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE VA ++I+R +WV+S NF+ +ML++A++R EISVV DQ G P Sbjct: 126 AYGRSKLAGEEAVALSCRKHLIVRVSWVFSEHADNFVRTMLKIARQRDEISVVRDQIGYP 185 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A +++IA +++ GI+H+ G V A AE IF ES GGP ++ Sbjct: 186 TYCPDLAAGLLEIAGQVLQ-PGFEDWGIYHLAG-GSEVDRASMAEAIFAESRTIGGPAAR 243 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 V + T+ YPT A RP + LD K + + W+ G++ Sbjct: 244 VLPVLTQDYPTPAERPLNARLDAGKANRVFGVALPNWQIGLQK 286 >gi|92116640|ref|YP_576369.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] gi|91799534|gb|ABE61909.1| dTDP-4-dehydrorhamnose reductase [Nitrobacter hamburgensis X14] Length = 304 Score = 294 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 117/295 (39%), Positives = 169/295 (57%), Gaps = 6/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ ++ G NGQ+ +L + + +I R DL KP+ A F PD+IINPAAY Sbjct: 1 MRIVLTGTNGQVGGALRPLLEKGGTVIAPSRIAFDLSKPETLAEALDGFKPDLIINPAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AEDE E+AF +NA+G AIA + +P I+ STDYVFDG + P E SPT P Sbjct: 61 TAVDRAEDERELAFLVNAKGPAAIAAWSARHRVPLIHFSTDYVFDGSNDRPWREDSPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SKLAG+ + ++I+RT+WVY+ G+NFL ++ RLA ER+E+ +V DQ G Sbjct: 121 LSVYGASKLAGDLAIRVAGGPHLIVRTSWVYAASGANFLRTIARLAGERKELRIVADQVG 180 Query: 181 TPTSALQIARAIIQIAH---NLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 PT+A IA A+ I + +E G+ ++ G SW FA I RG Sbjct: 181 APTTASAIAAAVAGIVVSNGSNLEGLFARNGGVVNLAC-AGETSWYGFASAIVAGLKSRG 239 Query: 238 GPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I T +PT+A RP S LD S+L + + TW+E + + L ++ Sbjct: 240 VKLAVEMITPIATADFPTRAKRPGNSRLDLSRLRDRLRVTTPTWQEALSSELDSL 294 >gi|167586361|ref|ZP_02378749.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ubonensis Bu] Length = 302 Score = 294 bits (753), Expect = 9e-78, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 156/296 (52%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+IG GQ+ L + E+ V R +DL P + PDVI+N AAY Sbjct: 1 MRILLIGKRGQLGWELQRSLLPLGEVFAVDRQTLDLSSPLTIGPAIAAIRPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E+A +NA G +A AA + ++ STDYVFDGL+ P E +P Sbjct: 61 TAVDEAETHHELATMVNATAVGELAVAARKLNALLLHYSTDYVFDGLAEVPYREEVRPDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE+ +A ++++ RT+WVY G NFL ++ + A E+ + VV DQ G Sbjct: 121 QTVYGRSKLAGEQAIADSGADWLVFRTSWVYGTNGRNFLRAIAKAACEQDALRVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 TPT+ +A +Q +I+ + D S G++H+T G +W FA+ I + RG Sbjct: 181 TPTAVRVLADLSVQALRTVIQLRRSGDLSKLGLYHLTL-RGETTWHGFAQAIVCGMSARG 239 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I + A RP YS LDCS+ + W + + +L ++ Sbjct: 240 VHDLRATRVDEITSSDLTRAARRPKYSVLDCSRFDAAFELARPAWDQALEIVLDDM 295 >gi|21910057|ref|NP_664325.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS315] gi|28896245|ref|NP_802595.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes SSI-1] gi|21904248|gb|AAM79128.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS315] gi|28811496|dbj|BAC64428.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes SSI-1] Length = 284 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 122 DPKTEYGRTKRLGELAVERYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TWKE ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWKEALKAFYQQ 280 >gi|33862387|ref|NP_893947.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9313] gi|33640500|emb|CAE20289.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9313] Length = 301 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 152/300 (50%), Gaps = 15/300 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR------PDIDLLKPKDFASFFLSFSPDVII 55 K L+ G GQ+ Q+L + C VE++ R +DL + + PD ++ Sbjct: 4 KVLLTGAAGQLGQALQASCPSSVELVSTSRMGDGLLQPLDLADAQACRAAVFQHRPDWVL 63 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AYTAVD AE EP++A ++NA A+A+ G + +STD+VF+G P Sbjct: 64 NAGAYTAVDHAEQEPDLALAVNASAPRALAEGLLETGGRMLQVSTDFVFNGAQGHPYRPN 123 Query: 116 SPTNPLNIYGKSKLAGEEKVAS---YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 P +PL +YG +K AGEE V V LRT+WVY G NFLL+MLRL +ER ++ Sbjct: 124 QPRDPLGVYGATKAAGEEAVEQILGAQGRAVTLRTSWVYGPVGRNFLLTMLRLHREREQL 183 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQ G PTS + +A A + E L + H D G SW DFA I Sbjct: 184 NVVVDQVGCPTSTITLATACWALMK---EPQQPYLPPVLHWC-DAGAASWYDFAVAIGEL 239 Query: 233 SAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +G + V I T +YPT A RP+YS LDCS+ + W+ + ++ ++ Sbjct: 240 GVAKGLLQRAAVVNPIITAEYPTPAQRPSYSLLDCSETRQLLGLHACHWRVALEQVIADV 299 >gi|59800778|ref|YP_207490.1| putative reductase [Neisseria gonorrhoeae FA 1090] gi|240013647|ref|ZP_04720560.1| putative reductase [Neisseria gonorrhoeae DGI18] gi|240080228|ref|ZP_04724771.1| putative reductase [Neisseria gonorrhoeae FA19] gi|240115181|ref|ZP_04729243.1| putative reductase [Neisseria gonorrhoeae PID18] gi|240117465|ref|ZP_04731527.1| putative reductase [Neisseria gonorrhoeae PID1] gi|240120717|ref|ZP_04733679.1| putative reductase [Neisseria gonorrhoeae PID24-1] gi|240125273|ref|ZP_04738159.1| putative reductase [Neisseria gonorrhoeae SK-92-679] gi|260441001|ref|ZP_05794817.1| putative reductase [Neisseria gonorrhoeae DGI2] gi|268596379|ref|ZP_06130546.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae FA19] gi|268600860|ref|ZP_06135027.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID18] gi|268603166|ref|ZP_06137333.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID1] gi|268683874|ref|ZP_06150736.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-92-679] gi|291044330|ref|ZP_06570039.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|293399519|ref|ZP_06643672.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae F62] gi|59717673|gb|AAW89078.1| putative reductase [Neisseria gonorrhoeae FA 1090] gi|268550167|gb|EEZ45186.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae FA19] gi|268584991|gb|EEZ49667.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID18] gi|268587297|gb|EEZ51973.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID1] gi|268624158|gb|EEZ56558.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-92-679] gi|291011224|gb|EFE03220.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|291610088|gb|EFF39210.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae F62] Length = 287 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPYQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII++ +RGI+H G VSW +FA +IF + ++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYAG-GKSVSWYEFARHIFQTALQQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|290891006|ref|ZP_06554070.1| hypothetical protein AWRIB429_1460 [Oenococcus oeni AWRIB429] gi|290479405|gb|EFD88065.1| hypothetical protein AWRIB429_1460 [Oenococcus oeni AWRIB429] Length = 276 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 154/283 (54%), Gaps = 16/283 (5%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 ++ G NGQ+ Q L + + ++ + +D+ + + PDV+++ AAYT Sbjct: 1 MITGANGQLGQELHELLEDRGLDFVAYDSKTLDITNRQLVFEAIEAQKPDVVLDAAAYTK 60 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AEDE +I + +N +G+ +A+AA + +YISTDYVFDG S E PTNP Sbjct: 61 VDAAEDEGKQINWQVNRDGSKNLAQAAKAFASKLVYISTDYVFDGTSSDEYSENDPTNPK 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YGK+KLAGE+ + + I+RT+WV+ +G+NF+ +M +LAK +++VV DQ G Sbjct: 121 NEYGKAKLAGEKAILDAAVDAYIIRTSWVFGKYGNNFVYTMQKLAKTHPKLTVVNDQVGR 180 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A I+ + + G ++++ + G SW DFA+ I Sbjct: 181 PTWTKTLAEFILYLIDHQAA------YGTYNLS-NRGTASWYDFAKEILN------NYSL 227 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ + + Q+P KA+RP +S L K T I I TW+E ++ Sbjct: 228 EIKAVNSDQFPQKAYRPRHSVLSLKKSQQTGFI-IPTWQEALK 269 >gi|91774152|ref|YP_566844.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM 6242] gi|91713167|gb|ABE53094.1| dTDP-4-dehydrorhamnose reductase [Methanococcoides burtonii DSM 6242] Length = 261 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 100/286 (34%), Positives = 148/286 (51%), Gaps = 28/286 (9%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++IG +G + LS + ++ D+D+ + P V+IN AAYT V Sbjct: 1 MIIGASGMLGSDLSRAFP---DAVKFTHHDLDITNKQQVLKKIEEIKPYVVINAAAYTNV 57 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D EDE +IAF +N G IA+A IG ++ STDYVFDG + E + T P+N+ Sbjct: 58 DGCEDEQDIAFKVNGHAPGYIAQACSDIGAILVHFSTDYVFDGSKKE-YVESNITKPINV 116 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 YG+SKL GE+++ T+NY I+RT+W++ G NF+ +MLRL+KE + VV DQFG PT Sbjct: 117 YGQSKLMGEQEIIKNTDNYRIIRTSWLFGKNGKNFVDTMLRLSKEMENVKVVNDQFGKPT 176 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 IAR +I + GI+H+T + GP +W +FA I + Sbjct: 177 HTADIARKTAEIINL--------NPGIYHITNE-GPCTWYEFASEIINNT---------- 217 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++++PTKA RP YS L +K + WK + L Sbjct: 218 VPCSSEEFPTKAKRPTYSVLTNTKTT-----PMRHWKNALNEYLKE 258 >gi|332995214|gb|AEF05269.1| dTDP-4-dehydrorhamnose reductase [Alteromonas sp. SN2] Length = 286 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 157/294 (53%), Gaps = 14/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +VIGN GQ++ L + ++ I +G D D+ + +P VIIN AAY Sbjct: 1 MSIVVIGNAGQLSFELVRILGEN--TICLGPEDTDITNESVLSETLSKLAPSVIINAAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ ++ +INA +AK G +++STDYVF+G +P P Sbjct: 59 TAVDKAEEDFDLCHAINATAVENLAKYCKQSGAFLVHVSTDYVFNGHKGSPYLTDDTIEP 118 Query: 121 LNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YGK+K GE+ + N ++RTAWVYS G+NF+ +MLRL ++ ++SV+ DQ Sbjct: 119 QGVYGKTKADGEKALLELLPNSSCLIRTAWVYSSHGNNFVKTMLRLMADKPQLSVIDDQI 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A +A + A N +G++H T D G SW DFA I E+G Sbjct: 179 GTPTWAKGLAEVCVSAAQN-------KTQGVYHWT-DEGVASWYDFALAIQELGIEKGLL 230 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTH-NIRISTWKEGVRNILVNI 290 S V I + QYPT A RP YS LD + +T ++ ++ W+ + ++ + Sbjct: 231 SSAIPVLPIPSSQYPTPASRPHYSVLDKTSTRDTFSSLNLTHWRTQLSAMMDEL 284 >gi|225870341|ref|YP_002746288.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. equi 4047] gi|225699745|emb|CAW93509.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. equi 4047] Length = 282 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 141/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVD AE+E + +IN G IAKA + G +YISTDYVFDG + E Sbjct: 62 AVDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGQKPAGQEWLETDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V YT + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTAYGRAKRLGELAVERYTKQFYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA I E+A Sbjct: 182 HGRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E + Sbjct: 233 ---VEVVPVDSSAFPAKAKRPFNSTMNLDKAKAT-GFVIPTWQEALEAFYKQ 280 >gi|254828462|ref|ZP_05233149.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N3-165] gi|284801416|ref|YP_003413281.1| hypothetical protein LM5578_1167 [Listeria monocytogenes 08-5578] gi|284994558|ref|YP_003416326.1| hypothetical protein LM5923_1121 [Listeria monocytogenes 08-5923] gi|258600858|gb|EEW14183.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N3-165] gi|284056978|gb|ADB67919.1| hypothetical protein LM5578_1167 [Listeria monocytogenes 08-5578] gi|284060025|gb|ADB70964.1| hypothetical protein LM5923_1121 [Listeria monocytogenes 08-5923] Length = 276 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 16/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I + GI+ + + G +W +FA I + Sbjct: 181 LGRPTYTYDLADFIRFVIEK------NPAYGIYQFS-NSGTATWFEFATEILKD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++P KA RP S + K+ I TW++ + Sbjct: 228 KDVTVNPCTSDEFPQKAERPKTSIMSLEKVEK-LGFNIPTWQDALVRF 274 >gi|19745868|ref|NP_607004.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS8232] gi|19748019|gb|AAL97503.1| putative dTDP-4-keto-L-rhamnose reductase [Streptococcus pyogenes MGAS8232] Length = 284 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 18/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE + +IN G+ IAKA G +YISTDYVFDG E Sbjct: 62 AVDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTDYVFDGNKPVGQEWVETDRP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y ++ I+RTAWV+ +G NF+ +M +LA+ ++VV DQ Sbjct: 122 DPKTEYGRTKRLGELAVEGYAEHFYIIRTAWVFGNYGKNFVFTMEQLAENHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N G +H++ D +W DFA+ I + A Sbjct: 182 HGRPTWTRTLAEFMCYLTENQKA------FGYYHLSNDAKEDTTWYDFAKEILKDKA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + + +P KA RP S ++ K T I TW+E ++ Sbjct: 233 ---VEVVPVDSSAFPAKAKRPLNSTMNLDKAKAT-GFVIPTWQEALKAFYQQ 280 >gi|87303235|ref|ZP_01086028.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 5701] gi|87282130|gb|EAQ74091.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 5701] Length = 310 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 111/301 (36%), Positives = 156/301 (51%), Gaps = 17/301 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV---EIIRVGRPDIDLLKPK-----DFASFFLSFSPDVI 54 LVIG +GQ+A +L + + ++ RP++DL P P ++ Sbjct: 7 VLVIGRSGQVASALRRLAPTLLTQRPLLLAARPELDLAAPAPELDATVEQLLEQHQPALV 66 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVDKAE EPE+A +IN G +A+A + +P ++STDYVF G P E Sbjct: 67 LNAAAYTAVDKAESEPELAAAINNAAVGVLARACAARSLPLFHLSTDYVFAGGGERPWRE 126 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 PT PL +YG SKL GE + + +++LR +WV+ + G+NF+ +MLRL ER +SV Sbjct: 127 DDPTGPLGVYGASKLGGEGALRAAGGPHLLLRVSWVFGVEGANFVRTMLRLGAERPALSV 186 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSD------TSLRGIFHMTADGGPVSWADFAEY 228 V DQ G PTSA IA + +A I N G +H + VSW FAE Sbjct: 187 VADQIGGPTSAEAIATTWLSLAEAAIANRSQLDPDLPFPWGTYHYAGE-PAVSWYGFAEA 245 Query: 229 IFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 IF E+ G + I T YPT A RPA S ++ S+ +I W+E +R Sbjct: 246 IFAEAVALGLLARAPDLTPIPTSAYPTPAQRPANSRMETSRFRAAFDIPPPDWREDLRTC 305 Query: 287 L 287 L Sbjct: 306 L 306 >gi|269837687|ref|YP_003319915.1| dTDP-4-dehydrorhamnose reductase [Sphaerobacter thermophilus DSM 20745] gi|269786950|gb|ACZ39093.1| dTDP-4-dehydrorhamnose reductase [Sphaerobacter thermophilus DSM 20745] Length = 283 Score = 293 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 142/289 (49%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+ ++L + I+ G D+ F PDVI++ A Sbjct: 1 MRILVTGGTGQVGRALQRLAPPGYSIVAPGSDRCDVTDFDAFIRLVADEQPDVIVHAGAM 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E +PE AF INA G +A AA G +Y+ST+YVFDG + P EF+ P Sbjct: 61 TDVDGCERDPERAFRINATGTQHVAAAAQQFGAALVYLSTNYVFDGEAAEPYHEFAERRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGEE V + + I+RTA VY G NF+ +MLR A ER ++VV DQ G Sbjct: 121 INVYGRSKLAGEEAVRAIAPRHYIVRTAMVYDETGRNFVNTMLRAAAERPSLTVVADQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A I ++ G +H+ + G SW ++A IF + Sbjct: 181 NPTYAGDLAAGIYRLIEQ-------PAYGTYHLVNE-GSASWYEWATEIFRLAE----IE 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I ++ A PA L + A I + W++ + L Sbjct: 229 TRVEPIPAAEWHRAARPPANGVLANT-AAAALGITLPPWQDALARCLAR 276 >gi|325685363|gb|EGD27470.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 324 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 103/328 (31%), Positives = 156/328 (47%), Gaps = 49/328 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYSGLADGSSVTTAPYVSLDITNAEG 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVI++ AA+TAV+ AED+ ++A +N +G IA A + +P +YIS Sbjct: 61 VKQAITEVNPDVIVHCAAWTAVELAEDDDKVAAVRKVNTDGTQNIANVAKELDVPMVYIS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG TP D P+N+YG++KL GE V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTTPWDPDFKGYKPMNVYGETKLGGELAVSETLDKYFIVRIAWVFGLNGKNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML + K E+ VV DQ GTPT L +AR ++ + +T G +H T Sbjct: 181 IKTMLNVGKTHDEVKVVSDQIGTPTYTLDLARLLVDMI-------ETDKYGYYHATNAEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T++Y +KA RP S Sbjct: 234 PETASGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVNI 290 LD SKL + TW + V L + Sbjct: 290 LDKSKLEKNGFKPLPTWPDAVHRYLEAL 317 >gi|125623087|ref|YP_001031570.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris MG1363] gi|27462668|gb|AAO15545.1|AF458777_4 RfbD [Lactococcus lactis subsp. cremoris MG1363] gi|124491895|emb|CAL96816.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris MG1363] gi|300069835|gb|ADJ59235.1| dTDP-4-dehydrorhamnose reductase [Lactococcus lactis subsp. cremoris NZ9000] Length = 299 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 148/294 (50%), Gaps = 20/294 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + ++D+ +FF P+++ + AAYT Sbjct: 2 ILITGGNGQLGTELRHLLDERGMAYTATDAKELDITDKVAVDTFFDKNKPELVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVDKAEDE E+ IN +G +A+AA +G +YISTDYVF G +P Sbjct: 62 AVDKAEDEGRELDEKINVDGTKNVAEAAARVGATLVYISTDYVFGGTLPIGQEWPVDAPK 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GEE V + + I+RTAWV+ +G NF+ +M LA E++VV DQ Sbjct: 122 APESEYGRTKHLGEEAVVASGVKHYIVRTAWVFGSYGPNFVFTMQNLATRFPELTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP---VSWADFAEYIFWESAE 235 G PT +A ++ + ++ + G +H+T D P V+W DFA+ I ++ Sbjct: 182 HGRPTWTRTLAEFMVYLV------NEKADFGFYHLTNDAAPGEDVTWFDFAKEILKDTDV 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + ++P KA RP S + K T I TW++ + ++L Sbjct: 236 L------VKPVDSSKFPAKAKRPFNSTMSLEKAKAT-GFVIPTWQDALASMLEK 282 >gi|229825470|ref|ZP_04451539.1| hypothetical protein GCWU000182_00830 [Abiotrophia defectiva ATCC 49176] gi|229790033|gb|EEP26147.1| hypothetical protein GCWU000182_00830 [Abiotrophia defectiva ATCC 49176] Length = 318 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 100/316 (31%), Positives = 149/316 (47%), Gaps = 41/316 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMC---VQDVEI--------------------------IRVGR 31 M+ LV G GQ+ +++ QD + R Sbjct: 1 MRILVTGAEGQLGKAVIRELLGKKQDFDFKLMLTVFNDVSWNSLYNWMHENGLSDERAEI 60 Query: 32 PDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 +D+ S +F PD +IN AYTAVD E+ E A +N G +A + Sbjct: 61 TALDITDYYLVKSALENFMPDTVINCVAYTAVDDCEEHEEEARLVNETGVKNLALVVKEL 120 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 ++ISTDYVFDG P E +P++ YG++K GE+ V + Y ++RTAW+Y Sbjct: 121 DASLVHISTDYVFDGNGTKPYMEEDTVSPVSAYGRTKTFGEKAVCENLDKYFLVRTAWLY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 G NF+ +ML L+++ + + VV DQ G+PTSA ++AR II + T GI+ Sbjct: 181 GE-GKNFVKTMLALSEKNKTLRVVSDQTGSPTSAAELARFIIYLIR-------TDKYGIW 232 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 H D G SW +F + I S G +V I +++Y TKA RP YS L KL Sbjct: 233 HGVCD-GSTSWYEFTKEIMRLS---GKTEIEVLPIKSEEYKTKAKRPHYSVLSNEKLHKE 288 Query: 272 HNIRISTWKEGVRNIL 287 +I +W+E ++ L Sbjct: 289 TEFKIKSWQEALKEYL 304 >gi|32455999|ref|NP_862001.1| rb126 [Ruegeria sp. PR1b] gi|22726351|gb|AAN05147.1| RB126 [Ruegeria sp. PR1b] Length = 282 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 124/290 (42%), Positives = 157/290 (54%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A+ L ++ +GR DL P A+ + +P +IN AAY Sbjct: 1 MSILVFGATGQVAREL----ATHDGVVCLGRDQADLSDPGACAAAIRAHAPRAVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E E+A IN GA+A A +G+P + ISTDYVF G P P P Sbjct: 57 TAVDKAEGEEELARIINGAAPGAMAAACVQLGVPLVQISTDYVFAGSGEMPWRPEDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SK AGEE V + Y ILRT+WV S G NF+ +MLRL ER ++++V DQ G Sbjct: 117 PNAYGRSKRAGEEAVIAAGGTYAILRTSWVVSCHGHNFVKTMLRLGAERDQLTIVGDQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A I +A LI +D GI+H VSWADFA IF ++ G Sbjct: 177 APTPARDIAAACISMAEQLI--ADPGKSGIYHFQG-APCVSWADFAREIFAQA----GLS 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ L I W+ G+R IL ++ Sbjct: 230 CAVADIPTSDYPTPAARPLNSRLDCALLDTVFGIPQPDWRVGLREILKDL 279 >gi|300768304|ref|ZP_07078208.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494092|gb|EFK29256.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 288 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 90/287 (31%), Positives = 150/287 (52%), Gaps = 16/287 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G NGQ+ L + + + + ++D+ + P V+ + AAY Sbjct: 3 KVMIVGANGQLGHELQRLLNEQGMVFDALTEKELDITDLDAVKAKIAELQPAVLYDCAAY 62 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVDKAEDE + + +N +G +A+ A G+ +Y+STDY+FDG ++ E P N Sbjct: 63 TAVDKAEDEGKALNWLVNVDGTKNLAQVAAEQGVKLVYVSTDYIFDGTNKGEYLEDDPAN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N YG++K AGEE V +Y I+RT+WV+ FG NF+ +M LAK +++VV DQ Sbjct: 123 PKNEYGRAKWAGEEAVRHSGADYYIVRTSWVFGEFGHNFVFTMQNLAKTHDKLTVVNDQL 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + G + ++ D +W DFA+ I ++ Sbjct: 183 GRPTWTRTLAEFMAHLVKT------EAASGTYQLSNDN-TATWYDFAKEILKDT------ 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + ++Q+P KA+RP +S ++ K T +I TW+E + Sbjct: 230 DVEVAPVTSEQFPQKAYRPQHSVMNLDKAKAT-GYQILTWQEALSMF 275 >gi|225868703|ref|YP_002744651.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus] gi|225701979|emb|CAW99538.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus] Length = 282 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 18/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQVKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 AVD AE+E + +IN G IAKA + G +YISTDYVFDG + E Sbjct: 62 AVDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGQKPAGQEWLETDTP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V YT + I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTAYGRAKRLGELAVERYTKQFYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA I E+ Sbjct: 182 HGRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETG--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + +P KA RP S ++ K T I TW+E + Sbjct: 233 ---VEVVPVDSSAFPAKAKRPFNSTMNLDKAKAT-GFVIPTWQEALEAF 277 >gi|315231850|ref|YP_004072286.1| dTDP-4-dehydrorhamnose reductase [Thermococcus barophilus MP] gi|315184878|gb|ADT85063.1| dTDP-4-dehydrorhamnose reductase [Thermococcus barophilus MP] Length = 283 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 104/294 (35%), Positives = 140/294 (47%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG NGQ+ L + + E I + D+D+ PDVIIN AAY Sbjct: 1 MRVAVIGANGQLGTDLVEVFGE--EAIPLTHKDLDVTDFGSL-KILKELKPDVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE PE AF +NA GA +AK A+ I +YISTDYVFDG P E NP Sbjct: 58 VRVDDAELYPEKAFQVNAIGALNVAKIANEIDAVNVYISTDYVFDGTKGKPYIEEDVPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK AGE +Y+ Y I+R A +Y S G NF+ M++ AK+ I VV Sbjct: 118 INVYGLSKYAGEIFTKNYSGRYYIIRVASLYGKAGASGKGGNFVEFMIQKAKKGENIRVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D F +PT +AR + + E G++HM + G SW +F IF Sbjct: 178 KDMFMSPTYTKDVARTLKKFLELKPE------FGVYHMVNE-GYCSWYEFTRAIFEILGW 230 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G V I + + A RP S L KL +++ W+E + L Sbjct: 231 EVG----VKPIKSSELKRLAKRPQLSALRNEKLEK-LGLKMRHWREALGEYLKE 279 >gi|295693595|ref|YP_003602205.1| dtdp-4-dehydrorhamnose reductase [Lactobacillus crispatus ST1] gi|295031701|emb|CBL51180.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus crispatus ST1] Length = 328 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 153/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD------------------IDLLKPKD 41 MK V G NGQ+ + + + E + +D+ + Sbjct: 1 MKAFVTGVNGQLGHDVMNELAKRGYEGVGSDLAPEYAGVDDNTAVTKAPYVALDITDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 +PDVII+ AA+TAVD AED+ ++A +N G IA A + +P +Y+S Sbjct: 61 VDKVISEVNPDVIIHCAAWTAVDMAEDDDKVAAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P + PLN+YG++KL GE+ VA+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTKPWEPDFKGYKPLNVYGETKLGGEKAVANTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H T Sbjct: 181 IKTMLKVGANHDEVRVVDDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHATNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T +Y +KA RP S Sbjct: 234 PATESGYDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL + W + VR L Sbjct: 290 LDKSKLVENGFKPLPVWPDAVRRYL 314 >gi|85859801|ref|YP_462003.1| dTDP-4-dehydrorhamnose reductase [Syntrophus aciditrophicus SB] gi|85722892|gb|ABC77835.1| dTDP-4-dehydrorhamnose reductase [Syntrophus aciditrophicus SB] Length = 287 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 11/287 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ G + L + E+ P+ID+ LS PD+ +N A+ Sbjct: 1 MKILIFGHRGMLGSELMMRLQANHEVAGQDIPEIDITSYDACRQAILSIKPDLAVNATAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E E F++NA G G +A +GI ++ STDYVF+G +TP E +P Sbjct: 61 TDVDACETRREECFAVNALGVGHLALICRDMGIKLVHFSTDYVFNGRRKTPYAEEDFCDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG SKL GE+++ +++++RTAW+Y G NF+ ++L A+ + VV DQ G Sbjct: 121 LNVYGLSKLEGEKRLQEAGCDHLLIRTAWLYGKNGKNFVRAILARAETDPVLDVVDDQRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + ++ A+ + + GI+H+T + G +W +FA I S G Sbjct: 181 CPTYSADLSDAVGFLI-------EGGHSGIYHVT-NSGQCTWYEFACRILKSS---GILD 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V + + A R YS L+C K + W E + + L Sbjct: 230 VEVRPTTSDKLARPACRSPYSVLNCEKYFRDTGHAMRHWTEALNDYL 276 >gi|271962203|ref|YP_003336399.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM 43021] gi|270505378|gb|ACZ83656.1| dTDP-4-dehydrorhamnose reductase [Streptosporangium roseum DSM 43021] Length = 285 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 140/285 (49%), Gaps = 12/285 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G +G +A L E ++ + R ++DL + PD ++N AA+ Sbjct: 3 RWLITGASGMLATELLGRLQAAGESVLALRRDELDLRDGPAVRHLVSACRPDTVVNCAAW 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE A ++N G A+A+A + +G I STDYVFDG + P E + T P Sbjct: 63 TAVDDAETREAEALAVNGHGVRALAEACERLGARMIQPSTDYVFDGTALDPYREDARTCP 122 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++KLAGE V ++RTAW+Y G NF+ +M L + R + VV DQ Sbjct: 123 VNAYGRTKLAGEHAVLEVLPETGYVVRTAWLYGATGKNFVRTMAELERTRPSLEVVDDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A II++ G++H T G SW FA IF G Sbjct: 183 GPPTWAGDLAAGIIEL------GRTGPPPGVYHATG-SGQTSWYGFAREIFKLV---GAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 ++ + TK++ A RPAYS L + + + W+E +R Sbjct: 233 PDRITPVSTKEFARPAPRPAYSVLGHERWSLAGLPPMRDWREALR 277 >gi|317403268|gb|EFV83786.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans C54] Length = 304 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 107/295 (36%), Positives = 155/295 (52%), Gaps = 7/295 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LVIG +GQ+ L + VGR D DL P A PDVI+N AA+T Sbjct: 4 KILVIGRDGQLGFELRRSLAPLGVVTAVGRADCDLTYPLQIARLVRREKPDVIVNAAAFT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AV++A+++ A INAE AG ++ A G ++ S+DYVFDG DE PL Sbjct: 64 AVERAQEDGVRAMRINAEAAGELSALAAERGALIVHYSSDYVFDGAKPGAYDERDTPAPL 123 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+SKLAGE+ V + +++ RT+WVY +FG++FL +ML ++ + VV DQ G Sbjct: 124 NVYGRSKLAGEQAVRAMNPAHLVFRTSWVYGVFGNSFLKTMLMALRQPETLRVVSDQRGA 183 Query: 182 PTSALQIARAIIQIAHNLIENS--DTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-- 237 PT A IA A + + + G++H+ A G SW ++A +I ++ G Sbjct: 184 PTGAAYIADATALVLARYLARPADEAFPFGLYHLAA-TGDASWHEYACFIAQQARRAGLA 242 Query: 238 --GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + + QYPT A RP S LD L T IR W++GV + L I Sbjct: 243 VTLTPADIRAVPSDQYPTTARRPLNSRLDSRLLERTFGIRAPHWEDGVTHALAAI 297 >gi|114571005|ref|YP_757685.1| dTDP-4-dehydrorhamnose reductase [Maricaulis maris MCS10] gi|114341467|gb|ABI66747.1| dTDP-4-dehydrorhamnose reductase [Maricaulis maris MCS10] Length = 287 Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 112/288 (38%), Positives = 159/288 (55%), Gaps = 7/288 (2%) Query: 6 IGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD--VIINPAAYTA 62 G GQ+A+ L S +++ + R ++DL + ++ +P+ V++N AAYTA Sbjct: 2 FGTTGQVARCVLDSAGNAGLDVTALSRVNVDLADQDAIRAAIMA-APEGSVVVNAAAYTA 60 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + +INA +A+A G ++ISTDYVFDG TP E PTNP Sbjct: 61 VDQAESDEASCRAINAVAPTVMAEACHKRGFIFLHISTDYVFDGSKATPYFEGDPTNPQG 120 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +KL GE V + +VILRTAWVYS +G NFL +MLRL +R + VV DQ G P Sbjct: 121 VYGTTKLEGEAGVREVHDKWVILRTAWVYSRYGKNFLKTMLRLGADRDSLGVVDDQRGCP 180 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A+I + L D G++H GG SWADFA++IF ++R G Sbjct: 181 THAADIATALITLVDQL--RPDDVRFGLYHFCGRGG-ASWADFADHIFAVQSDRWGRRPD 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V R+ + YPT A RPA S L + ++ TW E V+ ++ + Sbjct: 238 VNRVTSADYPTPAKRPANSMLCSDRFSSAFGFTAPTWTESVQTVVEQL 285 >gi|163853096|ref|YP_001641139.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] gi|163664701|gb|ABY32068.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] Length = 296 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 145/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGVRVHAPDRQSLDITDEATVAAALDARTYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G FH D G +W DFA I SA RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDEAAPTGSFHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S L L + + + +W+ + +IL + Sbjct: 239 SVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDILDRL 289 >gi|221134348|ref|ZP_03560653.1| dTDP-4-dehydrorhamnose reductase [Glaciecola sp. HTCC2999] Length = 286 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 155/291 (53%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G NGQ+ S + Q++E+I G+ +D+ + F PD++IN AA Sbjct: 1 MKILIAGANGQVGSEFSQLNLDQNIELILCGKDTLDITDKRLTEQLFEHHRPDIVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE EPE AF IN G +A A + I++STDYVFDG P + N Sbjct: 61 YTAVDLAEKEPERAFLINETGCENLAIACVKYDVHLIHLSTDYVFDGTKSLPYESNDIPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG+SKLAGE+K+ + Y ILR +WV+ +G+NF+ +MLRLA+ + ++ DQ Sbjct: 121 PINVYGQSKLAGEQKIIHLLSRYTILRVSWVFGQYGNNFVKTMLRLAENNTHLEIINDQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+A IA + IA N GI H + VSWA FAE IF + G Sbjct: 181 GGPTAANDIAMICVNIAQN-----SDRFTGILHFSG-TPFVSWAQFAEAIFRTAHIEGAI 234 Query: 240 YS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 S V I + Y + +RP S L S + +I W+ +++L Sbjct: 235 KSVPSVVPIKSIDYKSSTNRPKNSTLKTSISLSHF--KIINWQ---KSMLK 280 >gi|239993212|ref|ZP_04713736.1| dTDP-4-dehydrorhamnose reductase [Alteromonas macleodii ATCC 27126] Length = 289 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 13/295 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M ++IG +GQ+A LS + ++ +GR DID+ + S +V+IN +A Sbjct: 1 MNIVIIGKSGQLAFELSRELENSEHQVSFLGRDDIDITSASNIEETLSPLSAEVVINASA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE++ E +IN +A + G +++STDYVF+G +P Sbjct: 61 YTAVDKAEEDTEACNAINTLAVKNLANFCKANGAFMVHVSTDYVFNGHKGSPYLTDDTIE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YGKSK GE+ + + ++RTAWVYS G+NF+ +MLRL ++ ++ V+ DQ Sbjct: 121 PQGAYGKSKAEGEKALLEILPDASCLIRTAWVYSSHGNNFVKTMLRLMADKPQLGVIDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPT A +A + A N G++H T D G SW DFA I E+G Sbjct: 181 IGTPTWAKGLAEVCVTAALN-------KTSGVYHWT-DEGVASWYDFALAIQELGVEKGL 232 Query: 239 PY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI-RISTWKEGVRNILVNI 290 V I + QYPT A RP YS LD + + W++ + ++L + Sbjct: 233 LDKSVPVLPIPSSQYPTPAKRPHYSVLDKQSAREAFAACKPTHWRKQLASMLDEL 287 >gi|195977965|ref|YP_002123209.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974670|gb|ACG62196.1| dTDP-4-dehydrorhamnose reductase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 282 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 18/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L + + V+ + V ++D+ F P ++ + AAYT Sbjct: 2 ILITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQLKPSLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AE+E + +IN G IAKA + G +YISTDYVFDG E Sbjct: 62 AVDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGNKPAGQEWLETDVP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GE V Y Y I+RTAWV+ +G NF+ +M LAK ++VV DQ Sbjct: 122 DPQTAYGRAKRLGELAVERYAKQYYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + +A N G +H++ D +W DFA I E+A Sbjct: 182 HGRPTWTRTLAEFMCHLADN------RKPYGYYHLSNDAKEDTTWYDFAREILKETA--- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + +P KA RP S ++ K T I TW+E + Sbjct: 233 ---VEVVPVDSSAFPAKAKRPFNSTMNLDKAKAT-GFVIPTWQEALEAF 277 >gi|167755698|ref|ZP_02427825.1| hypothetical protein CLORAM_01213 [Clostridium ramosum DSM 1402] gi|237734665|ref|ZP_04565146.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|167704637|gb|EDS19216.1| hypothetical protein CLORAM_01213 [Clostridium ramosum DSM 1402] gi|229381993|gb|EEO32084.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 283 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V+G+NGQI +++ + ++E++ + ++D+ D SF PD+IIN AA Sbjct: 3 KVWVVGSNGQIGTAINEVIEPLEIEVLNTDQDELDITNTDDVISFGEINRPDIIINCAAI 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V K E + AF +NA G + A IG + ISTD VFDG S TP +EF P Sbjct: 63 TDVYKCERNRDQAFRVNALGPRNLCIVARKIGAKVVQISTDDVFDGKSDTPYNEFDVAKP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SK AGE+ V +T+ + I+R+ W+Y G+NF+ + +K+ ++V DQFG Sbjct: 123 KTVYGCSKKAGEDYVKEFTHKHFIIRSNWIYGQNGTNFVNEFIAKSKKEDFLNVANDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +ARAI+ + +TS G +H+T G S +FA+ I +++ + Sbjct: 183 SPTSAKDLARAILYLM-------ETSEYGTYHITCK-GVCSRYEFAKEI----SKQINSH 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + TK+ + RP+Y LD L + ++ TW+E ++ + I Sbjct: 231 VMITPVSTKEMADEVVRPSYVVLDNFILRLVNGYQMPTWQESLQEYIKEI 280 >gi|154247482|ref|YP_001418440.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] gi|154161567|gb|ABS68783.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] Length = 297 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 142/291 (48%), Positives = 192/291 (65%), Gaps = 2/291 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V G GQ+ SL VE+I +GRP++DL S + +PD I++ AA Sbjct: 1 MRLIVTGKQGQVVSSLLERGPAASVEVIALGRPELDLADAASVRSAIAAAAPDAIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE EP++AF++N GAGA+A+AA ++G+P I++STDYVF G P E PT Sbjct: 61 YTAVDKAECEPDLAFAVNETGAGAVAEAAGALGVPVIHLSTDYVFAGDKADPYVETDPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG SKLAGE+KVA+ T+N+ ILRTAWVYS FG+NFL +MLRL + R + VV DQ Sbjct: 121 PVSVYGASKLAGEKKVAAATDNHAILRTAWVYSPFGANFLKTMLRLGESRDVLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPTSAL IA A+I +A L + D +LRG+FH+T GG +WADFA+ IF E+ G Sbjct: 181 GTPTSALDIADAVIAVARRLKADPDPALRGVFHLTG-GGEGTWADFADAIFGGLKEKTGR 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV RI T YPT A RPA S L KL +++ I ++ W R ++ + Sbjct: 240 EVKVERITTADYPTPARRPANSRLSTKKLQSSYGIVLADWDASTRGVVDRL 290 >gi|320529735|ref|ZP_08030813.1| dTDP-4-dehydrorhamnose reductase [Selenomonas artemidis F0399] gi|320137974|gb|EFW29878.1| dTDP-4-dehydrorhamnose reductase [Selenomonas artemidis F0399] Length = 285 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 150/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ ++ + E+ V L + + F PD I++ AA Sbjct: 1 MKILITGATGQLGSDCTTEFKARGHEVYGVSSHMFPLSDEQAMRAVLEEFEPDSILHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AEDEP++ +NA G +AK A G +YISTDYVF G TP + P Sbjct: 61 YTAVDAAEDEPDLCRLVNAAGTEIVAKLAAEYGCRLLYISTDYVFPGTGDTPYEADDPKG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGEE VA++ +Y I+R +WV+ G NF+ +ML LA + +S+V DQ Sbjct: 121 PKNVYGASKLAGEEAVAAHLTDYFIVRISWVFGTHGKNFVKTMLSLADTHKSLSIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + S + G++H T + G SWA+FA IF + G Sbjct: 181 GSPTYTRDLAPLLADM-------SVSDRYGVYHATNE-GFCSWAEFAREIFRAA----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + ++ YPTKA RP S L L R+ W++ V L + Sbjct: 229 DVAVTSVPSRAYPTKAARPKNSRLSKKSLDAAGFRRLPPWQDAVARFLAEL 279 >gi|222087848|ref|YP_002546386.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium radiobacter K84] gi|221725296|gb|ACM28452.1| dTDP-4-dehydrorhamnose reductase [Agrobacterium radiobacter K84] Length = 295 Score = 292 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 115/292 (39%), Positives = 164/292 (56%), Gaps = 4/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G NGQ+A +L+ + + +E + GR ++DL + I+N AA Sbjct: 1 MTLLILGKNGQVATALAELAEERGLEWVAWGRGELDLSDLDQTYVAIMKSGASAIVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A +NA+ +A+AA + +P ++ISTDYVF G TP E + Sbjct: 61 YTAVDKAESEAASAMRLNADAPAIVAQAARELDVPFVHISTDYVFSGDKTTPYTEDDAIS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++IYG SK GE++V + ILRTAWV+ GSNF+ +MLRL ER+E+ VV DQ Sbjct: 121 PISIYGLSKAEGEKRVREVYSAATILRTAWVFHESGSNFVKTMLRLGGERKELRVVADQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-G 238 G PT A IA A ++I + + S+ G FH G +W FAE IF E+A G Sbjct: 181 GNPTYAGDIALACLKIVE-IAKARSRSVAGTFHFAG-RGYTTWHGFAEAIFAEAAAHGWV 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RPA S DCS++A+ I W++ + + L + Sbjct: 239 VPGRVTAISTAEYPTPARRPANSRFDCSRIASVLEIDAPHWRDSLAHCLRRL 290 >gi|254823646|ref|ZP_05228647.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL J1-194] gi|254853032|ref|ZP_05242380.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL R2-503] gi|255522693|ref|ZP_05389930.1| hypothetical protein LmonocFSL_16046 [Listeria monocytogenes FSL J1-175] gi|300765931|ref|ZP_07075904.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N1-017] gi|258606380|gb|EEW18988.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL R2-503] gi|293592869|gb|EFG00630.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL J1-194] gi|300513393|gb|EFK40467.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes FSL N1-017] Length = 276 Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 16/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVNEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I + GI+ + + G +W +FA I + Sbjct: 181 LGRPTYTYDLADFIRFVIEK------NPAYGIYQFS-NSGTATWFEFATEILKD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++P KA RP S + K+ I TW++ + Sbjct: 228 KDVTVNPCTSDEFPQKAERPKTSIMSLEKVEK-LGFNIPTWQDALVRF 274 >gi|16803124|ref|NP_464609.1| hypothetical protein lmo1084 [Listeria monocytogenes EGD-e] gi|47094942|ref|ZP_00232555.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes str. 1/2a F6854] gi|224502602|ref|ZP_03670909.1| hypothetical protein LmonFR_08784 [Listeria monocytogenes FSL R2-561] gi|254830146|ref|ZP_05234801.1| hypothetical protein Lmon1_02255 [Listeria monocytogenes 10403S] gi|254898742|ref|ZP_05258666.1| hypothetical protein LmonJ_02965 [Listeria monocytogenes J0161] gi|254911769|ref|ZP_05261781.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes J2818] gi|254936095|ref|ZP_05267792.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes F6900] gi|16410486|emb|CAC99162.1| lmo1084 [Listeria monocytogenes EGD-e] gi|47016560|gb|EAL07480.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes str. 1/2a F6854] gi|258608685|gb|EEW21293.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes F6900] gi|293589721|gb|EFF98055.1| dTDP-4-dehydrorhamnose reductase [Listeria monocytogenes J2818] Length = 276 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 16/288 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ Sbjct: 121 NPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A I + GI+ + + G +W +FA I + Sbjct: 181 LGRPTYTYDLADFIRFVIEK------NPAYGIYQFS-NSGTATWFEFATEILKD------ 227 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++P KA RP S + K+ I TW++ + Sbjct: 228 KDVTVNPCTSDEFPQKAERPKTSIMSLEKVEK-LGFNIPTWQDALVRF 274 >gi|120437610|ref|YP_863296.1| dTDP-4-dehydrorhamnose reductase [Gramella forsetii KT0803] gi|117579760|emb|CAL68229.1| dTDP-4-dehydrorhamnose reductase [Gramella forsetii KT0803] Length = 282 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 152/292 (52%), Gaps = 14/292 (4%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK LV G NGQ+ Q + + ++D+ FF D IN Sbjct: 1 MKTILVTGANGQLGQCFQKQTQNFSNFKFFFCSSGELDITSKDALEQFFQKHQIDFCINT 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYT V++AE+E E AFS+NAEG IA+ G + STDYVF+G S+ P E Sbjct: 61 AAYTNVEQAENEEEKAFSVNAEGTKNIAEICKKHGAVLFHFSTDYVFNGQSQKPYKEIDE 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +P+N+YG SKL GEE++ S Y ILRT+W+YS FG NF ++LR +E+ E+++ Sbjct: 121 VDPINVYGASKLKGEEEIQSTMEQYFILRTSWLYSEFGHNFFRTILRKVEEKAELNITTS 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q GTPT+A +A+ ++++ +S++ G++H + + G +W DFA I S Sbjct: 181 QIGTPTNANDLAKFVLKMI-----SSESQDFGLYHFSNE-GQATWYDFAAEILNYS---- 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V T + T A RP YS L K I WKE + N++ Sbjct: 231 GKMDQVQLNKTGFFKTLAERPEYSVLSKEKFTEQFG-PIDNWKESLFNLINE 281 >gi|87201248|ref|YP_498505.1| dTDP-4-dehydrorhamnose reductase [Novosphingobium aromaticivorans DSM 12444] gi|87136929|gb|ABD27671.1| dTDP-4-dehydrorhamnose reductase [Novosphingobium aromaticivorans DSM 12444] Length = 285 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 108/291 (37%), Positives = 155/291 (53%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+ ++L + + + + R +DL A + PD++ N AAY Sbjct: 1 MKALVTGVGGQLGRALLATAPEGWTCVALDRAALDLGDADAIARIVETEQPDLVFNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EPE+A +INA GA A+A G + +STD+VFDG S + NP Sbjct: 61 TAVDKAESEPELANAINAGAPGAFARALAGSGKRLVQVSTDFVFDGASGHGYRPGNARNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG SK AGE+ + ++ +I+RT+WVY+ G+NF+ +MLRL +ER E+ VV DQ G Sbjct: 121 QSVYGASKAAGED---AAGDDAIIVRTSWVYAAGGANFVRTMLRLMREREELRVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 +PT A +AR + +A GI+H D G SW DFA I E+ G Sbjct: 178 SPTWATGLARTLWGLAA-------ADRPGIYHH-RDAGVASWYDFAVAIAEEAHALGLIA 229 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I T YPT A RP++S LD S + W+ ++ +L Sbjct: 230 RIPAIVPIATSDYPTPAKRPSFSVLDVSGTRSLLGDAHVHWRTNLKTMLKE 280 >gi|254558142|ref|YP_003065667.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] gi|254265685|emb|CAX17026.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] Length = 296 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPDGVRVHAPDRQSLDITDEGAGAAALDARAYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A GIP +++STDYVF+G +P N Sbjct: 61 YTAVDKAESEVAAAWRLNALAPAILATETKRRGIPLVHVSTDYVFEGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRL+ ER +++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSANPRHAIVRTAWVVSPHRGNFVKTMLRLSGEREKLTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA A + + D + G H D G +W DFA I SA+RGG Sbjct: 181 GCPTSAA-DLAAALATIALRLAGDDAAPTGTVHCVND-GATTWCDFARAIVAGSAKRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L++ + I W+ + +IL + Sbjct: 239 SVPVEGIPTAAYPTPARRPANSRLSTQSLSDAYGIAPRPWEAALDDILDRL 289 >gi|87123106|ref|ZP_01078957.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] gi|86168826|gb|EAQ70082.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] Length = 305 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 109/300 (36%), Positives = 158/300 (52%), Gaps = 14/300 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVII 55 + L+ G GQ+ Q+L + + +E+I GR +DL + + PD ++ Sbjct: 6 RVLLTGAAGQLGQALMASVPEGIELIATGRSVGQGMLGLDLADAEACRQAVEAHQPDWVL 65 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AYTAVD+AE EPE+A ++NA+ A A+A +G + +STD+VF+G +P Sbjct: 66 NAGAYTAVDRAEMEPELAQAVNAQAPCAFAEALADMGGHLLQVSTDFVFNGQQGSPYRPE 125 Query: 116 SPTNPLNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 P NPL +YG++K AGEE V + +ILRT+WV G NF L+MLRL +ER EI Sbjct: 126 QPRNPLGMYGRTKAAGEEAVEQLLGGSGRGLILRTSWVMGPVGRNFALTMLRLHRERPEI 185 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +VV DQ G PTS +A A + + S L + H + D G SW D A + Sbjct: 186 AVVADQVGCPTSTATLAAACWRAIA--VAESPNGLPPVLHWS-DAGAASWYDVAVAVGEL 242 Query: 233 SAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E G + V I T +YPT A RP+YS LDCS ++ W++ + +L I Sbjct: 243 GVELGLLERAAHVNPITTAEYPTPAQRPSYSLLDCSATRQVLDLPALHWRQALHQLLQAI 302 >gi|328948132|ref|YP_004365469.1| dTDP-4-dehydrorhamnose reductase [Treponema succinifaciens DSM 2489] gi|328448456|gb|AEB14172.1| dTDP-4-dehydrorhamnose reductase [Treponema succinifaciens DSM 2489] Length = 319 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 29/313 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSF------------ 49 +IG G + ++ ++ ++ I + D+D+ P + + F + Sbjct: 2 VWLIGYKGMLGSEIAKQLTENKIDWIGSDK-DVDITNPAELSKFAHNHGTAAGRTGISVA 60 Query: 50 ------SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 +IN AAYTAVDKAE++ E+A +NAEG IA+ +G I+ISTDYV Sbjct: 61 RGTVPEKITWVINCAAYTAVDKAEEDSELAEKLNAEGPKNIARITRELGAKLIHISTDYV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E P ++YG++K AGE+ V Y ILRTAW+Y G NF+ +M Sbjct: 121 FDGTGNFPYTEDMLKCPDSVYGRTKAAGEDFVEKEMTQYYILRTAWLYGFDGKNFVYTMT 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQI------AHNLIENSDTSLRGIFHMTADG 217 + + E+SVVCDQ GTPT A+ +A AI++I A +L G++H T + Sbjct: 181 KAMNSKDEVSVVCDQKGTPTCAVDLASAILKIMSTSEKAKSLFGKKSALPYGVYHFT-NL 239 Query: 218 GPVSWADFAEYIFWESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 G +W DF + I+ + G + T +YP A RPAYS L K+ I+ Sbjct: 240 GETTWFDFTKKIYEFGKKYGRITKDCTINSCTTDEYPCAAKRPAYSVLSKDKIQTLLKIK 299 Query: 276 ISTWKEGVRNILV 288 I W+E + + Sbjct: 300 IPEWQETLEKFIK 312 >gi|119475337|ref|ZP_01615690.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2143] gi|119451540|gb|EAW32773.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2143] Length = 299 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 12/288 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+NGQ+ L +C + ++ + +D+ + P +IN AAYT Sbjct: 20 ILITGSNGQVGSELVVLCREKNIPFVAYNSQQLDITDSDRVFAEIKKQQPTAVINAAAYT 79 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE E A+++N EGA +A A + + ++ISTDYVFDG P E TNP+ Sbjct: 80 AVDNAEIELSKAYAVNKEGAKNLAIACEELNAVLVHISTDYVFDGEKDGPYLETDKTNPV 139 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SKLAGE +V + + Y I+R +WV+ +G+NF+ +ML LAK E+ VV DQFG Sbjct: 140 SVYGASKLAGEREVVEFCSKYFIVRVSWVFGQYGNNFVKTMLGLAKNHTELKVVDDQFGA 199 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES--AERGGP 239 PTSA QIA ++ + S + G +H+ ++ G V+W +FA IF + A+ Sbjct: 200 PTSADQIAEKLVTLVT-----SASINYGTYHLESNPG-VTWYEFANKIFQYAHDAKIIKN 253 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V+ I + YP RP S L + + ++ W++G+ ++ Sbjct: 254 IPRVHPIDSTHYPKPVMRPKNSKLAST---SQFDLGTIDWEKGLEKLI 298 >gi|239998522|ref|ZP_04718446.1| putative reductase [Neisseria gonorrhoeae 35/02] gi|240016086|ref|ZP_04722626.1| putative reductase [Neisseria gonorrhoeae FA6140] gi|240112441|ref|ZP_04726931.1| putative reductase [Neisseria gonorrhoeae MS11] gi|240123021|ref|ZP_04735977.1| putative reductase [Neisseria gonorrhoeae PID332] gi|240127727|ref|ZP_04740388.1| putative reductase [Neisseria gonorrhoeae SK-93-1035] gi|254493244|ref|ZP_05106415.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 1291] gi|268594382|ref|ZP_06128549.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 35/02] gi|268598508|ref|ZP_06132675.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae MS11] gi|268681647|ref|ZP_06148509.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID332] gi|268686117|ref|ZP_06152979.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-93-1035] gi|226512284|gb|EEH61629.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 1291] gi|268547771|gb|EEZ43189.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae 35/02] gi|268582639|gb|EEZ47315.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae MS11] gi|268621931|gb|EEZ54331.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae PID332] gi|268626401|gb|EEZ58801.1| dTDP-4-dehydrorhamnose reductase [Neisseria gonorrhoeae SK-93-1035] Length = 287 Score = 291 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ Q+A L +D E I +D+ + SF PD I+N AAY Sbjct: 1 MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + AF++NA +A AA I+ISTDYVFDG + P E TNP Sbjct: 61 TAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPHQESDFTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G Sbjct: 121 SNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 PT A ++ AII++ +RGI+H G VSW +FA +IF + ++ Sbjct: 181 CPTYAGDLSAAIIRLLQQ-----SNPVRGIYHYAG-GKSVSWYEFARHIFQTALQQDASF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P ++ + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 235 PVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 286 >gi|187920918|ref|YP_001889950.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187719356|gb|ACD20579.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 300 Score = 291 bits (746), Expect = 8e-77, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 146/295 (49%), Gaps = 7/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G GQ+ L+ +++R R DL KP + PDV++N AAY Sbjct: 1 MRIAITGVQGQLGWELARSLAPLGDVVRWDREVADLSKPALLDGLMRFYRPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAED+ A +N E +A+AA G ++ STDYVFDG S P E T P Sbjct: 61 TAVDKAEDDCVTARLVNTESVDVMARAAKRAGALFVHFSTDYVFDGKSPEPYSEDCETAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +K GE + + +++I RT+WVY+ G+NF+L+MLRLA ER + +V DQ G Sbjct: 121 LNVYGATKRDGELAIIASECDHLIFRTSWVYATRGANFMLTMLRLAGEREALKIVDDQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERG- 237 PT A +A + + G+FH+T+ G SW +A I + Sbjct: 181 APTPARMLANVTAHAISQAMRERREARFQSGLFHLTS-RGVTSWHGYASAIIDYARNLAP 239 Query: 238 ---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + ++ +PT+A RP S L+ + + W + + L Sbjct: 240 SGRVRVTHIEPVPSEAFPTRAARPRNSALNNDRFDERFGLVRPHWWDALAQTLDE 294 >gi|163859122|ref|YP_001633420.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii DSM 12804] gi|163262850|emb|CAP45153.1| dTDP-4-dehydrorhamnose reductase [Bordetella petrii] Length = 323 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 147/291 (50%), Gaps = 7/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G GQI +L + I R DL + + PD+I+N AA Sbjct: 21 MKILLLGATGQIGNALRRTLLPLGSITAPSRAQADLANLDGLRALLQAQVPDLIVNAAAC 80 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE++P A +NAE +A A G ++ STDYVFDG +TP E +P Sbjct: 81 TAVDQAENDPAPARRVNAEAVAVLAAHARKSGALLVHYSTDYVFDGAKQTPYLETDAPHP 140 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++LRT+WVY+ G NF+ ++L+LA++R E+ VV DQFG Sbjct: 141 LNEYGRSKLAGEQAIAASGCRALVLRTSWVYAAHGRNFVKTVLQLAQQRDELRVVADQFG 200 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PTSA +A G++H+ A G SW + A + + +G Sbjct: 201 APTSAELVADVTALALAAHRRQQLPD--GLYHLCA-AGTASWHELACHSVRRARRQGMAL 257 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I YP A RP S LD +LA + + W + + Sbjct: 258 RLRPEHIHAIGADDYPLPAPRPRNSRLDTQRLAGALGLELPDWTLHLDRAI 308 >gi|58039512|ref|YP_191476.1| dTDP-4-dehydrorhamnose reductase [Gluconobacter oxydans 621H] gi|58001926|gb|AAW60820.1| dTDP-4-dehydrorhamnose reductase [Gluconobacter oxydans 621H] Length = 297 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 109/289 (37%), Positives = 157/289 (54%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+A SL ++ + IIRVGRP+ D +P+ A+ + P V++N AA+TA Sbjct: 7 ILVTGGNGQLATSLQNLGNER--IIRVGRPEFDFDRPETIAATIEKYKPSVVVNAAAWTA 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E + A N G A+A A IP I++STDYVF G TP E T+P Sbjct: 65 VDLAETEKDGAERANNSGPAALAAACAKADIPFIHVSTDYVFSGDKGTPYTEEDATSPET 124 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE+ V + +ILRT+WVYS G NF+ +M+ + + VV DQ G P Sbjct: 125 VYGSTKAEGEQAVLTANIKSIILRTSWVYSAHGKNFVRTMINAGAKNPVLKVVGDQKGNP 184 Query: 183 TSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 TS+ +A AI+ I + + RGIFH + G +W A E+A+ G Sbjct: 185 TSSDDLAEAILAIIALIERDGWKPEYRGIFHASG-TGETTWHGLAVAALEEAAKHGQTMP 243 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T+ +PT A RP S +D SKL +++ W+ V +I+ + Sbjct: 244 QVNAIRTEDWPTPAKRPQDSRMDNSKLHRVFGVKMPDWRHSVTHIVHKL 292 >gi|313894991|ref|ZP_07828548.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 137 str. F0430] gi|312975886|gb|EFR41344.1| dTDP-4-dehydrorhamnose reductase [Selenomonas sp. oral taxon 137 str. F0430] Length = 285 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 148/291 (50%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ ++ + E+ V L + + F PD I++ AA Sbjct: 1 MKILITGATGQLGSDCVTEFKARGHEVYGVSSHMFPLSDERAMRAVLEEFEPDSILHAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AEDEP+ +NA G +AK A G +YISTDYVF G TP + P Sbjct: 61 YTAVDAAEDEPDPCRLVNAAGTEIVAKLAAEYGCRLLYISTDYVFPGTGDTPYEADDPKG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N+YG SKLAGEE VA++ +Y I+R +WV+ G NF+ +ML LA + +S+V DQ Sbjct: 121 PKNVYGASKLAGEEAVAAHLTDYFIVRISWVFGTHGKNFVKTMLSLADTHKSLSIVSDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A + + + G++H T + G SWA+FA IF + G Sbjct: 181 GSPTYTRDLAPLLADMIV-------SDRYGVYHATNE-GFCSWAEFAREIFRAA----GK 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + ++ YPTKA RP S L L R+ W++ V L + Sbjct: 229 GVAVTSVPSRAYPTKAARPKNSRLSKKSLDAAGFRRLPPWQDAVARFLAEL 279 >gi|297374637|emb|CBL42924.1| dTDP-4-dehydrorhamnose reductase [Candidatus Magnetobacterium bavaricum] Length = 278 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 103/281 (36%), Positives = 148/281 (52%), Gaps = 12/281 (4%) Query: 11 QIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 +A L + Q + R D+D+ + PDV++N AAYTAVD+AE E Sbjct: 1 MLAGDLIPILAQYHYLYSQNRADLDITDAGRVFKVVDVYRPDVVVNCAAYTAVDRAETER 60 Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 E+A +N G +A A +P +ISTDYVFDG P F T+P+N YG+SKLA Sbjct: 61 EMAMLVNGIGVQNLALACSKYDVPLCHISTDYVFDGSKGAPYTPFDNTSPVNFYGESKLA 120 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 GE V T + I+RT+W+Y G NF+ +MLRL+ +R E+ VV DQ G PTS + +AR Sbjct: 121 GECYVRWLTGKFYIIRTSWLYGARGGNFVKTMLRLSTQRDEVRVVHDQVGNPTSTVSLAR 180 Query: 191 AIIQIAHNLIENSDTSLRGIFHMT-ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 AI I ++ G++H+T G ++W DFA I + G ++V I T Sbjct: 181 AIKVII-------ESGRYGVYHVTDQTDGKLNWYDFACEIMRLA----GAGTRVVPITTA 229 Query: 250 QYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +YPT A RP YS LD + + + +W + + I Sbjct: 230 EYPTAARRPVYSVLDLEPSRLSVDYPLKSWDAALAECIEGI 270 >gi|254432333|ref|ZP_05046036.1| dTDP-4-dehydrorhamnose reductase [Cyanobium sp. PCC 7001] gi|197626786|gb|EDY39345.1| dTDP-4-dehydrorhamnose reductase [Cyanobium sp. PCC 7001] Length = 298 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 113/294 (38%), Positives = 154/294 (52%), Gaps = 11/294 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G GQ+ Q L + C V +I GR ++DL + L PD ++N AYTA Sbjct: 8 VLLTGAGGQLGQELVAQCPAGVTLIATGRSELDLADAQACRQLVLERRPDWVLNAGAYTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE EPE+A ++NA A+A A G +++STD+VFDG +P +PL Sbjct: 68 VDRAESEPELAEAVNAGAPQALAAALAGTGGRLLHLSTDFVFDGRQGSPYATDQLRSPLG 127 Query: 123 IYGKSKLAGEEKVAS----YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +YG SK AGEE + + +LRT+WVY G NF L+MLRL E+ EI VV DQ Sbjct: 128 VYGASKAAGEEALLASSLLADGRVHVLRTSWVYGPVGRNFCLTMLRLHGEKEEIGVVADQ 187 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT+ +A A LIE ++ L I H + D G SW DFA I E G Sbjct: 188 VGCPTATPTLAAACW----RLIERAEVGLPDILHWS-DAGAASWYDFAVAIGELGVELGL 242 Query: 239 P--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T YPT A RP+YS LDC+ + W+E +R +L + Sbjct: 243 LQRQARVKPITTADYPTPARRPSYSLLDCTASRTALGLEPLHWREALRQVLGRL 296 >gi|188583450|ref|YP_001926895.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] gi|179346948|gb|ACB82360.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] Length = 296 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 150/291 (51%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L + + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQAFPWPEGVRVHAPDRQSLDITDEAAVAAALEARAYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S +VI+RTAWV S NF+ +MLRLA ER +++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSANPRHVIVRTAWVVSPHRGNFVKTMLRLANEREQLTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA +A A+ IA + + + G H D G +W DFA I SA RGG Sbjct: 181 GCPTSAADLAGALAAIALRM-AGDERAPTGTVHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L N + + W+ + +IL + Sbjct: 239 SVPVEGIPTAAYPTPARRPANSRLSTQSLTNAYGLAPRGWEAALDDILDRL 289 >gi|227894123|ref|ZP_04011928.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus ultunensis DSM 16047] gi|227864068|gb|EEJ71489.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus ultunensis DSM 16047] Length = 326 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 153/325 (47%), Gaps = 49/325 (15%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG-RPD-----------------IDLLKPKD 41 MK V G NGQ+ + + + E + +P+ +D+ Sbjct: 1 MKVFVTGVNGQLGHDVMNELAKRGYEGVGSDLKPEYAGVADGSAVTKMPYVPLDITDGAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYIS 99 PDVI++ AA+TAVD AED+ ++A +N G IA A + +P +Y+S Sbjct: 61 VEKVITDVDPDVIVHCAAWTAVDMAEDDDKVAAVRKVNVGGTQNIANVAKKLDVPMVYLS 120 Query: 100 TDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 TDYVFDG P PLN+YG++KL GE+ V+ + Y I+R AWV+ + G NF Sbjct: 121 TDYVFDGQGTEPWKPDFKGYKPLNVYGETKLGGEKAVSDTLDKYFIVRIAWVFGVNGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG- 217 + +ML++ E+ VV DQ GTPT +AR ++ + +T G +H+T Sbjct: 181 IKTMLKVGATHDEVKVVNDQIGTPTYTFDLARLLVDMI-------ETDKYGYYHVTNSEL 233 Query: 218 --------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHRPAYSC 262 G +SW DF + I+ ++ G +KV + T +Y +KA RP S Sbjct: 234 PATKSGFDENGTKTGYISWYDFTKEIYRQA----GYTTKVTPVTTAEYGLSKAVRPFNSR 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNIL 287 LD SKL +STW V L Sbjct: 290 LDKSKLVENGFKPLSTWPHAVHRYL 314 >gi|48474182|dbj|BAD22652.1| dTDP-rhamnose synthase [Streptococcus mitis] Length = 281 Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 17/275 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + +V + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNVNYVAVDVAEMDITNAEMVEKVFAEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 AVD AEDE E+ F+IN G +AKA++ G +YISTDYVFDG + Sbjct: 62 AVDAAEDEGKELDFAINVTGTENVAKASEKYGATLVYISTDYVFDGKKPVGQEWEVDDLP 121 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P YG++K GEE V + T+ + I+RTAWV+ +G NF+ +M LAK + ++VV DQ Sbjct: 122 DPQTEYGRTKRMGEELVENLTSQHYIIRTAWVFGNYGKNFVFTMKNLAKTHKTLTVVNDQ 181 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERG 237 G PT +A + + N E G +H++ D +W DFA I +S Sbjct: 182 HGRPTWTRTLAEFMTYLTENQKE------FGYYHLSNDSTEDTTWYDFAVEILKDS---- 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 +V + + ++P KA RP S + +K T Sbjct: 232 --DVEVVPVDSSKFPAKAKRPLNSTMSLAKAKATG 264 >gi|11500015|ref|NP_071262.1| dTDP-4-dehydrorhamnose reductas [Archaeoglobus fulgidus DSM 4304] Length = 285 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 98/294 (33%), Positives = 147/294 (50%), Gaps = 18/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK VIG GQ+ L + ++ + + D+D+ + PDVIIN AAY Sbjct: 1 MKVAVIGAKGQLGTDLVDVLKEEFTVYPLTHEDVDVAVSESLE-VLRDIHPDVIINTAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE+ E AF++NA GA +A+ + I IYISTDYVFDG P E NP Sbjct: 60 VRVDDAENHAEKAFAVNAIGALNVARISSEIDAVNIYISTDYVFDGEKGEPYVETDKPNP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK AGE +Y+ + ++R A +Y S G NF+ ++ +A++ +E+ +V Sbjct: 120 INVYGASKYAGEILTKNYSEKHYVIRVASLYGKAGASGKGGNFVNWVVDMARKGQELRIV 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQF +PT +A A+ + GI+HM D G SW +F + IF Sbjct: 180 ADQFMSPTYTKDVALAVREFLKL------RPDYGIYHMVND-GYCSWFEFTKAIFEILDW 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ I + + A RPA+S L KL I++ W+E +R+ L Sbjct: 233 ----DVEIQPIKSSELNRLARRPAFSALQNYKLERI-GIKMRHWREALRDYLAE 281 >gi|90425661|ref|YP_534031.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB18] gi|90107675|gb|ABD89712.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB18] Length = 291 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LVIG +GQ+A +L+ + ++ +G D++ L + + +IN AAY Sbjct: 1 MRILVIGRHGQVATALARLGAGVHDVTCLGHDDVNALVKAELDDAVTRTGAEAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A+++N +A+ + + G+P I++STDYVFDG P P P Sbjct: 61 TAVDKAETDQDAAYALNQRLPRLLAEISAARGVPFIHLSTDYVFDGSKAAPYLPTDPIRP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++IYG SK GE V ILRTAWVYS GSNF+ ML L ER E+ +V DQ G Sbjct: 121 VSIYGASKATGEIAVRVANPAAAILRTAWVYSETGSNFVKRMLELGAERDELRIVDDQLG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PT A +A A +++A + S GI+H G V+W FA+ IF E++ RG Sbjct: 181 NPTFADDLAAACLRLAAH-PGLRAGSAGGIYHYAGH-GDVTWYGFAQAIFAEASRRGRRT 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + QYPT A RPA S LDC+ T ++ +W++ ++ L + Sbjct: 239 PQRVLAITSDQYPTPARRPANSRLDCAATEATFSVASQSWRDALKTCLDRL 289 >gi|153853088|ref|ZP_01994497.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814] gi|149753874|gb|EDM63805.1| hypothetical protein DORLON_00482 [Dorea longicatena DSM 13814] Length = 282 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 151/289 (52%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++G +GQI +++ + ++E+ + ++D+ + +F + PDVIIN AA Sbjct: 3 KLWIVGASGQIGSAINEVLDPLEMEVFNTDKEELDITDTDEVLNFGVINRPDVIINCAAV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D E EPE+A+ +NA GA ++ A G + ISTD VFDG+ TP EF TNP Sbjct: 63 TDTDLCEKEPELAYRVNALGARNLSIVARKTGAKMVQISTDDVFDGIRHTPYTEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SK AGE V +T+ + ILR+ WVY G+NF+ +L A + E+ + DQFG Sbjct: 123 KTVYGRSKRAGENYVKEFTHKHFILRSNWVYG-NGNNFVNRVLHAADTKDELLIASDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +AR I+ + T+ G +H T G + +FA+ + + G Sbjct: 182 SPTSAKDLARIILYLIK-------TNEYGTYHATCQ-GVCNRYEFAQEVLKLA----GKR 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T + + RPAY+ LD L + + W+ ++ + Sbjct: 230 ITLRPVVTSESDLSSTRPAYAVLDNFILRIINVYEMPDWRASLKEYMDE 278 >gi|148252645|ref|YP_001237230.1| TDP-rhamnose synthetase, NAD(P)-binding [Bradyrhizobium sp. BTAi1] gi|146404818|gb|ABQ33324.1| dTDP-4-dehydrorhamnose reductase [Bradyrhizobium sp. BTAi1] Length = 300 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 165/291 (56%), Gaps = 2/291 (0%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII--RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + V+G +GQ+A++L +++ GR D+ F PD++INPAA Sbjct: 5 RLYVLGRHGQVARALQEASEAQPDLVVGFGGRDAFDIADTDAVLQALHGFQPDIVINPAA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE++ A+ +N +GA A+A+A+ + IP I++STDYVFDG P E Sbjct: 65 YTAVDRAEEDAAAAYHVNRDGARAVAEASARLEIPTIHLSTDYVFDGAKPAPYVEDDAPA 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKLAGE VA+ +VILRTAWVYS FG NF+ +MLRLA R + VV DQ Sbjct: 125 PINVYGASKLAGELAVAAANRRHVILRTAWVYSPFGQNFVRTMLRLASSRDTLRVVNDQV 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSAL IARAI+ IA + T+ G A V+W DFA I +A G Sbjct: 185 GCPTSALDIARAILAIARRIDRAGWTNEFGGVTHIAGPDVVTWYDFACSIMRVAAAHGAR 244 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I T+ YPT A RPA S L C +L + + + + + + + Sbjct: 245 TARIEPIPTRDYPTPARRPANSRLSCDRLTAVFGVSMPSLEASLSECVSRL 295 >gi|209967308|ref|YP_002300223.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum SW] gi|209960774|gb|ACJ01411.1| dTDP-4-dehydrorhamnose reductase, putative [Rhodospirillum centenum SW] Length = 299 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 111/295 (37%), Positives = 154/295 (52%), Gaps = 9/295 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLL--KPKDFASFFLSFSPDVIINPA 58 + L++G GQ+ +L + + + R +DL + D+++N A Sbjct: 5 RLLLLGGTGQVGTALRRLAPERGWSVSAPERSVLDLATADRDSLRQAVAAA--DLVVNAA 62 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT VD+AE E + A + NA G G +A+ P +++STDYVFDG P E P Sbjct: 63 AYTRVDQAETERDAAIAANATGPGLLARVCAEAERPLLHLSTDYVFDGSGTRPYREDDPV 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SK AGE V +VILRTAWV+S G+NFL +MLRL +ER E+ VV DQ Sbjct: 123 APLGVYGASKAAGEAAVREAGPRHVILRTAWVFSPDGNNFLRTMLRLGRERPEVRVVDDQ 182 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSL---RGIFHMTADGGPVSWADFAEYIFWESAE 235 G PT+A IA A + IA L + G FH+ +W FA IF E+ Sbjct: 183 RGCPTAADDIAAACLGIADRLAADRPDDASPLWGTFHVAG-TPATTWHGFAAAIFAEAER 241 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 RG P ++ I T YPT RPA+S LDC+++ + I W+ GVR L + Sbjct: 242 RGLPVPRLLPITTADYPTPTRRPAFSVLDCTRIGTVYGIAAPDWRAGVRRCLDRL 296 >gi|310780094|ref|YP_003968426.1| dTDP-4-dehydrorhamnose reductase [Ilyobacter polytropus DSM 2926] gi|309749417|gb|ADO84078.1| dTDP-4-dehydrorhamnose reductase [Ilyobacter polytropus DSM 2926] Length = 283 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 13/289 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ + + VE I G ++D+ +F + D +IN AAY Sbjct: 2 ILLTGGKGQLGSEFQKLFKKLGVEYIAPGHREMDITDINAVKNFLDGKNIDFVINCAAYN 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE EPE F++N +A + IG + S+D+VFDG + P E NP+ Sbjct: 62 DVDRAEMEPENCFAVNCLAPENLALESKKIGAVFVTYSSDFVFDGEKKKPYTESDIVNPM 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++Y KSK GE++V + + ++RT+WV+ +NF+ +++ +++R +I +V DQ + Sbjct: 122 SVYSKSKAEGEKRVFTACDKIFVIRTSWVFGTGNNNFVKNVINWSQQRGKIELVEDQVSS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A ++ ++ G++H++ + G S + +YI + +G Sbjct: 182 PTYAKDLAEYSWKLI-------NSDKYGLYHLS-NTGTASKYEEGKYILEKIGWKG---- 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ ++ T ++ A RP YS L K ++ WK + I Sbjct: 230 ELLKVKTSKFNLPAKRPRYSKLSNQKAEKITGKKMPQWKNSIDRFFEEI 278 >gi|83950200|ref|ZP_00958933.1| dTDP-4-dehydrorhamnose reductase [Roseovarius nubinhibens ISM] gi|83838099|gb|EAP77395.1| dTDP-4-dehydrorhamnose reductase [Roseovarius nubinhibens ISM] Length = 277 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 104/278 (37%), Positives = 150/278 (53%), Gaps = 7/278 (2%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 A+ + + + EI+ +GR D P + P+ +IN AYTAVD+AE++ + Sbjct: 2 AREVQARAPEGWEIVALGRDAADFTNPLATLAALKRARPEAVINAVAYTAVDRAEEDEAL 61 Query: 73 AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 A +N G +A ++G+P +++STDYVF G P T P N YG+SKLAGE Sbjct: 62 AQQVNGATPGLLAAECAAMGVPFVHLSTDYVFAGSGVAPYAPADATAPQNAYGRSKLAGE 121 Query: 133 EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAI 192 E V + +VILRT+WV+S G+NF+ +MLRL ER +++V DQ G PT A IA A Sbjct: 122 EAVRAAGGPHVILRTSWVFSSHGANFVKTMLRLGAERDRLTIVADQIGGPTPARAIAAAC 181 Query: 193 IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 ++IA L + D G +H + VSWA+FA IF ++ G +V I T YP Sbjct: 182 LRIAERLYK--DAGQSGTYHFSG-IPEVSWAEFAREIFAQA----GISCEVVDIPTSDYP 234 Query: 253 TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 T A RP S LDC I W+ G+ +L ++ Sbjct: 235 TPAQRPLNSRLDCRATETVFGIARPDWRVGLAEVLDDL 272 >gi|189502420|ref|YP_001958137.1| hypothetical protein Aasi_1063 [Candidatus Amoebophilus asiaticus 5a2] gi|189497861|gb|ACE06408.1| hypothetical protein Aasi_1063 [Candidatus Amoebophilus asiaticus 5a2] Length = 290 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 151/290 (52%), Gaps = 7/290 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G GQ+AQ+L+ + + + +D+ + + + + +IN AA Sbjct: 3 KVLITGGQGQLAQALAHTQPKHQYLFATYQSKQALDITHIQQVKRYLQNNPINYLINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AE + + A++INA G +A A ++ISTDYVF+GL P+ E TN Sbjct: 63 YTQVDHAETDQKRAYTINAIAPGYLANLAQEFNFTLLHISTDYVFEGLLAKPLIEGMTTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YGK+KLAGE+ + Y I+RT+W++ + G NFL +L+ +++ + I +V DQ Sbjct: 123 PVNYYGKTKLAGEQNILPYNIPAYIIRTSWLFDVLGDNFLTRLLKRSQQEKHIGMVYDQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A + +I + EN GI+H A+ G S D A W + G Sbjct: 183 SSPTYIQDLATTLWKIILQIHENPSLYQPGIYHY-ANEGVTSRYDLA----WTIHKIGNL 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + +P A+RP+YS LD K+ +T + I W+E + L N Sbjct: 238 NCNIIPKHSSDFPGFANRPSYSVLDKEKIKSTFGLTIPHWQESLAYCLHN 287 >gi|13518096|gb|AAK27394.1| putative dTDP-4-keto-L-rhamnose reductase [Burkholderia mallei] Length = 298 Score = 289 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 151/296 (51%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIF--WESAER 236 PT A IA + G++HMT+ G SW FA+ I W +A Sbjct: 181 APTWARSIADGTAHALTTAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIASWRAAPG 239 Query: 237 GGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S++ I YP A RPA S L L I + W+ +R + ++ Sbjct: 240 AAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYALRLCVNDL 295 >gi|317498847|ref|ZP_07957133.1| RmlD substrate binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893875|gb|EFV16071.1| RmlD substrate binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 248 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 131/257 (50%), Gaps = 13/257 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ + + Q +E I V ++D+ +PD +I+ AA Sbjct: 1 MRVFVTGVKGQLGYDVMNELEKQGLEGIGVDIDEMDITDADQVNKVIKEAAPDAVIHCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED EI +NA+G IAK + + I +YISTDYVF+G P + Sbjct: 61 YTAVDAAEDNEEICRKVNAQGTENIAKVCEELDIKMMYISTDYVFNGQGERPWEPDDKRE 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PLN+YG++K GE + + + +R AWV+ + G NF+ +ML L K ++VV DQ Sbjct: 121 PLNVYGQTKYEGELAIEEHVKKFFTVRIAWVFGVNGKNFIKTMLNLGKTHDHLTVVNDQT 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +AR ++ + T G +H T + G +W +FA IF ++ G Sbjct: 181 GSPTYTYDLARLLVDMIQ-------TDKYGRYHATNE-GICTWYEFACEIFKQA----GM 228 Query: 240 YSKVYRIFTKQYPTKAH 256 V + + +YP KA Sbjct: 229 NVSVAPVSSDEYPAKAK 245 >gi|188581605|ref|YP_001925050.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] gi|179345103|gb|ACB80515.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium populi BJ001] Length = 296 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 143/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L + + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQAFPWPEGVRVHAPDRQSLDITDEAAVAAALDARAYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE E A+ +NA +A IP I++STDYVFDG +P N Sbjct: 61 YTAVDRAESEVAAAWRLNALAPAILAAETRRRAIPLIHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S +VI+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PKSVYGASKAAGEMAVRSANPRHVIVRTAWVVSPHRGNFVKTMLRLANERDRLTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G H D G +W DFA I +A RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDEAAPTGTVHCVND-GATTWCDFARAIVAGAARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L + I W+ + +IL + Sbjct: 239 SVPVAGIPTAAYPTPARRPANSRLSTQSLTDAFGIAPRGWEAALDDILDRL 289 >gi|291550330|emb|CBL26592.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus torques L2-14] Length = 283 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 154/289 (53%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G+NGQI ++L+ + ++E++ D+D+ ++ +F + PDVIIN Sbjct: 3 KVWIAGSNGQIGRALNDILDPLEIEVLNTDLDDLDITNTEEVLNFGIVNRPDVIINCCGV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D E EPE A+ +NA GA ++ A G + +STD VFDG S+ P EF TNP Sbjct: 63 TDTDLCEKEPEHAYRVNALGARNLSIVARKNGAKIVQLSTDDVFDGQSKKPYTEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE V +T+ + I+R+ WVY G+NF+ +L +A++ + +SV DQFG Sbjct: 123 LTVYGASKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVNRVLEVAEQGKTLSVAGDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +AR I+ + T+ G +H+T G + +FA+ I S G Sbjct: 183 SPTSAKDLARMILYLI-------STNEYGTYHVTC-SGVCNRYEFAQEILRLS----GKN 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + T+Q + RP Y+ LD L + WKE + + Sbjct: 231 VELKAVPTEQSDLSSVRPPYAVLDNFILRIIDMYDMPDWKESLEEYMKE 279 >gi|221213793|ref|ZP_03586767.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221166582|gb|EED99054.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 305 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 147/293 (50%), Gaps = 9/293 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +V+G GQ+ L I+ R +DL S+ L +P V++N AAYTA Sbjct: 9 IIVLGGTGQVGFELVRAVQGIGPIVAPARQVLDLSDLCAVESWILRQNPLVVLNAAAYTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + + A INA +A+ IG I+ STDYVFDG E PLN Sbjct: 69 VDRAESDRDAAMRINAALPDTLARTCARIGALLIHYSTDYVFDGSKPDLYTESDDPAPLN 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SKLAGE +A + I RT+WVY GSNF+ +MLRLA ER +V DQ G P Sbjct: 129 VYGESKLAGERAIAEAAAPHAIFRTSWVYGNRGSNFMNTMLRLANERDRFRIVGDQIGAP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSL------RGIFHMTADGGPVSWADFAEYIFWESAER 236 T + IA + + + N G+FHM A+ G VSWA FA IF + Sbjct: 189 TWSRTIAELTVHLLSRTVSNGAIDQEFWNRNSGVFHMCAE-GEVSWAGFASAIFAHARPA 247 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 P V I + QYPT A RP S + +KL T ++ + W + + L + Sbjct: 248 SQPVIDV--IGSAQYPTPAKRPLNSRMSTAKLCATFDLHVPNWSDALAWCLQD 298 >gi|226305634|ref|YP_002765594.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis PR4] gi|226184751|dbj|BAH32855.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus erythropolis PR4] Length = 279 Score = 288 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD-VIINPAA 59 L+ G GQ+ + ++ + VG ++D+ + F SPD V+IN AA Sbjct: 3 NILLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFV---SPDSVLINCAA 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + E A ++N G +A+A G I++STDYVF G + TP D +PT Sbjct: 60 YTAVDAAETDQEAARAVNEIGPLNLARACARAGSRLIHVSTDYVFPGDASTPYDVDAPTG 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG++KL GE V + ++RTAWVYS G++F+ +M RL ER ++VV DQ Sbjct: 120 PATVYGRTKLDGEIAVRESGADVAVVRTAWVYSGVGTDFVATMRRLEAEREFVNVVDDQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT ++ +A I+++A + T FH+T +GG SW + A +F E G Sbjct: 180 GSPTYSVDLAGGIVELALRDFTGAST-----FHLT-NGGQASWYELARAVFEEI---GAD 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++V + + A RPAYS L + W+E + L Sbjct: 231 PARVRPCSSADFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAALA 279 >gi|257456602|ref|ZP_05621797.1| dTDP-4-dehydrorhamnose reductase [Treponema vincentii ATCC 35580] gi|257446022|gb|EEV21070.1| dTDP-4-dehydrorhamnose reductase [Treponema vincentii ATCC 35580] Length = 290 Score = 288 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 100/295 (33%), Positives = 155/295 (52%), Gaps = 14/295 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLS---FSP-DVIINP 57 +IG+ G +A +++ ++ I + ++D+ +F P IIN Sbjct: 2 IWLIGSKGMLASEIAAQLDTHAIQWIGSDK-EVDITDRISIEAFAQRNFTVGPLQWIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVDKAED+P A +NA+ I + A G I+ STDYVFDG S P E Sbjct: 61 AAYTAVDKAEDDPVTAQKLNADALINICEVAKQYGSQLIHFSTDYVFDGTSAVPYTEADH 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P ++YG +KL GE + + I+RTAW+Y G+NF+ +MLRL E+ + VV D Sbjct: 121 TQPQSVYGVTKLQGERNIVERLPEHYIIRTAWLYGKNGNNFVSTMLRLMNEKDSLKVVND 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A+ +A+A+++I D GI+H + + G ++W DFA I+ + E G Sbjct: 181 QRGSPTYAVDLAKAVLRIMQL-----DNHRYGIYHYSNE-GNITWYDFACEIYKQGKESG 234 Query: 238 GP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + ++P KAHRP++S L+ K+ ++ I W E + L + Sbjct: 235 LIKSDCAVASCSSNEFPQKAHRPSFSLLNKEKIKAAFSLSIPQWNESLTAYLKEL 289 >gi|83719857|ref|YP_442018.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] gi|167580856|ref|ZP_02373730.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis TXDOH] gi|167618957|ref|ZP_02387588.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis Bt4] gi|257138201|ref|ZP_05586463.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] gi|83653682|gb|ABC37745.1| dTDP-4-dehydrorhamnose reductase [Burkholderia thailandensis E264] Length = 298 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 110/296 (37%), Positives = 149/296 (50%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R + DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLARDEADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A +N E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAESDGAAAKVVNGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKSSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A IA + G++HMT+ G SW FA+ I G Sbjct: 181 APTWARSIADGTAHALATAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIVASWRAVPG 239 Query: 239 PY----SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S++ I T YP A RPA S L L I + W+ V + ++ Sbjct: 240 AAPLAVSRIVPIPTSAYPVPARRPANSVLSNEALKERFGIELPDWRYAVGLCVRDL 295 >gi|167563826|ref|ZP_02356742.1| dTDP-4-dehydrorhamnose reductase [Burkholderia oklahomensis EO147] Length = 298 Score = 288 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 113/296 (38%), Positives = 146/296 (49%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ LS +I + R DL +P+ A PD ++N AAY Sbjct: 1 MKILVTGANGQVGWELSRSLAVLGPVISLTREQADLGRPETLARIVEEARPDAVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG P E PT P Sbjct: 61 TAVDAAESDVASANRINGEAVGVLAAATKRVGGLFVHYSTDYVFDGSKPEPYVETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLA +R E+SVV DQFG Sbjct: 121 VNAYGASKLQGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLANQREELSVVADQFG 180 Query: 181 TPTSALQIARAIIQ-IAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT A IA +A + E D GI+HMT+ G SW FA+ G Sbjct: 181 APTWARSIADGTAHALATAMRERRDGGFASGIYHMTS-MGRTSWHGFADAAVASWRATPG 239 Query: 239 PYS----KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ I + YP A RP S L L I + W+ V + ++ Sbjct: 240 AAPLAVGKIAPIPSSAYPLPAKRPTNSVLSNDALKARFGIELPDWRYAVELCVKDL 295 >gi|170702910|ref|ZP_02893752.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170132190|gb|EDT00676.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 294 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 152/291 (52%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDIADADAVRRALDEHRAALVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A ++GIP I++STDYVFDG E + P Sbjct: 60 TAVDRAETEPDAAWQANRDGPAVLANACAALGIPLIHLSTDYVFDGRMPGAYAETAAVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG+SKLAGEE V + ++ILR AWV+ G+NF+ +MLR+ +ER + VV DQ+ Sbjct: 120 LGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGNNFVRTMLRVGRERDVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA ++ IA +T G +H+ +W FAE IF E+ G Sbjct: 180 GGPTHAGAIADTLLTIAARY-RAGETLHWGTYHLCG-TPVTTWHGFAETIFTEARRTGLI 237 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I T YP A RPA S LDCS+L I +W G+ +L Sbjct: 238 DRVPFVRPIRTDAYPLPAPRPANSALDCSRLREHFGIESPSWLAGLTEVLA 288 >gi|303233356|ref|ZP_07320025.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae PB189-T1-4] gi|302480485|gb|EFL43576.1| dTDP-4-dehydrorhamnose reductase [Atopobium vaginae PB189-T1-4] Length = 303 Score = 288 bits (737), Expect = 7e-76, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 153/304 (50%), Gaps = 30/304 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-------------VEIIRVGRPDIDLLKPKDFASFFL 47 M LV G++GQ+ ++L + ++ + D D+ + +F Sbjct: 1 MHILVTGSHGQLGRALEHLFSHGSSEAGALPASYKAAQVDYIDMDDCDISSQQAVEEWFS 60 Query: 48 SFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 S P D++IN AA T VD + AF+ NA+G +A A ++ +++STDYVF G Sbjct: 61 SHEPYDLVINCAAMTNVDGCDANRLAAFAANAQGPYNLAHACNNQHAALVHVSTDYVFAG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + P E P++ YG+SKLAGE V I+RTAW+Y G NF+ +ML LA Sbjct: 121 TQQRPRVEDDMVCPISGYGQSKLAGEALVRVTCPASFIVRTAWLYGYTGKNFVKTMLSLA 180 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + ISVV DQFG PTSA +A AI++IA + G++H T + G SWADFA Sbjct: 181 QTHESISVVDDQFGNPTSAEDLALAIVRIAAG-------APYGVYHCTCE-GTCSWADFA 232 Query: 227 EYIFWESAERGGPYSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + I E A+ +V RI + Y P A RP YS LD + + + +W+E Sbjct: 233 QAIMDEFAK----PCRVTRISSATYKEQHPQSASRPHYSSLDNANMRRAGIPPMRSWREA 288 Query: 283 VRNI 286 + + Sbjct: 289 LHSY 292 >gi|167758135|ref|ZP_02430262.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704] gi|167664032|gb|EDS08162.1| hypothetical protein CLOSCI_00473 [Clostridium scindens ATCC 35704] Length = 282 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 154/289 (53%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++G++GQI +++ + +VE+ + ++D+ + + +F PDVIIN AA Sbjct: 3 KIWIVGSSGQIGTAINEVLDPLEVEVFNTDKDELDITETDEVLNFGEINRPDVIINCAAV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D E EPE+AF +NA GA ++ A +G + +STD VFDGLS+TP EF TNP Sbjct: 63 TDTDVCEREPELAFRVNALGARNLSIVARKVGAKMVQLSTDDVFDGLSKTPYSEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L A E R ++V DQFG Sbjct: 123 KTVYGRSKRAGENYVKEFTHKHFIIRSNWVYG-RGNNFVTKVLDAADEGRTLAVASDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +AR I+ + T+ G +H T G S +FA+ I S G Sbjct: 182 SPTSAKDLARIILYLI-------PTNEYGTYHATCK-GVCSRYEFAQEILRFSGREG--- 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T + + RPAY+ LD L + WK + + Sbjct: 231 -SLKAVPTSESDLSSERPAYAVLDNFILRIIDVYEMPEWKRSLEEYMKE 278 >gi|153809621|ref|ZP_01962289.1| hypothetical protein RUMOBE_00002 [Ruminococcus obeum ATCC 29174] gi|149833799|gb|EDM88879.1| hypothetical protein RUMOBE_00002 [Ruminococcus obeum ATCC 29174] Length = 283 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G +GQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 3 KVWIAGASGQIGRALNDVLDPMQIEALNTDLDELDITDTDEVINFGTVNRPDVIINCTGI 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D+ E PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TNP Sbjct: 63 TDTDECEANPEHAYRVNALGARNLSIVARKCGSKIVQLSTDDVFDGQSKKPYTEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SK AGE V +T+ + ++R+ WVY G NF+ +L A+ +SV DQFG Sbjct: 123 LTVYGRSKRAGENYVKEFTHKHFVIRSNWVYGHGGHNFVNRVLAAAEAGNGLSVASDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +A+ I+ + T+ G +H+T G S +FA+ I + G Sbjct: 183 SPTSAKDLAKMIMYLI-------STNEYGTYHVTC-RGVCSRYEFAQEILKLA----GKD 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + T+Q A RP Y+ LD L + WKE ++ + Sbjct: 231 IELRAVPTEQSDLSAVRPPYAVLDNFILRIIEVYDMPDWKESLKEYMDE 279 >gi|296531721|ref|ZP_06894550.1| dTDP-4-dehydrorhamnose reductase protein [Roseomonas cervicalis ATCC 49957] gi|296267953|gb|EFH13751.1| dTDP-4-dehydrorhamnose reductase protein [Roseomonas cervicalis ATCC 49957] Length = 305 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 123/292 (42%), Positives = 175/292 (59%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G GQ+AQ+L + E+ + P +DL + A+ + P+++IN AA Sbjct: 1 MRILIAGREGQVAQALLRAFAPEGHEVTALEPPALDLTRRDSIAAAIAAARPELVINAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAED+ +AF++N +GA +A+AA +G P ++ STDYVFDG P E +PT+ Sbjct: 61 YTAVDKAEDDAALAFAVNRDGAAWLAEAASGVGAPFVHFSTDYVFDGAGGAPYAEDAPTS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK GEE V + VILRTAWV S G+NF+ +MLRLA R EI VV DQ Sbjct: 121 PLGVYGRSKREGEEAVLAANPRSVILRTAWVCSADGNNFVKTMLRLAATRDEIGVVADQL 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +A A+ +A +L++ R G+FH+T SW FAE IF +A RG Sbjct: 181 GAPTFAADLAEAVRAMAPHLLQAPAGDPRFGLFHLTG-APHTSWHGFAEAIFAGAAARGH 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T YPT+A RPA LDC ++A H I+ + W+ + +L + Sbjct: 240 KVPRLKAIGTADYPTRAQRPADGRLDCRRIATLHGIQAADWRRSLEAVLDTL 291 >gi|16125392|ref|NP_419956.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|221234135|ref|YP_002516571.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] gi|13422456|gb|AAK23124.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|220963307|gb|ACL94663.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] Length = 300 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 153/289 (52%), Gaps = 3/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G GQ+ L D ++ R +DL + F + +IN AA+T Sbjct: 7 ILVTGGAGQVGLELLGAAWPDGIVLHAPSRAALDLTNETSIRAAFEARPFAAVINSAAWT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E AF+ NA G +A+ + G+P I +STDYVFDG P E P P+ Sbjct: 67 AVDKAESEVAAAFAANAIGPALLAEVTRARGVPLIQVSTDYVFDGDKPGPYTEDDPVGPI 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 IYG SKLAGE V V+LRTAWV S +NFL +MLRLA +R + VV DQ G Sbjct: 127 GIYGASKLAGEMAVRLGNPRSVVLRTAWVLSAHRANFLKTMLRLAADRPVVRVVEDQLGC 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSA IA A+ I +I + G++H + G SWAD A IF S GG ++ Sbjct: 187 PTSARDIAEALQTITLGMIADPQAPN-GVYHFV-NSGEASWADLAREIFRLSHAHGGVHA 244 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + +YPT A RP S L +++A + I W E V +I+ ++ Sbjct: 245 EVEGIPSSEYPTPARRPRNSRLLTNRIAADYAIHPRPWTEAVADIIADL 293 >gi|269121009|ref|YP_003309186.1| dTDP-4-dehydrorhamnose reductase [Sebaldella termitidis ATCC 33386] gi|268614887|gb|ACZ09255.1| dTDP-4-dehydrorhamnose reductase [Sebaldella termitidis ATCC 33386] Length = 286 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 14/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPA 58 MK L+ G+NGQ+ ++ + +VE ++D+ FF D+IIN A Sbjct: 1 MKILLTGSNGQLGYDFQNLFDKLEVEYYATDYNELDITNDNKLEKFFNENKNFDIIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VDKAE + E + +N+E +A+ G + STD+VFDG ++P E Sbjct: 61 AYNDVDKAETDKEKCYLLNSEAPTKLAEICKKTGAVFMTYSTDFVFDGERKSPYTEKDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPL++YGKSK GE V + ++RT+WV+ I +NF ++ +K + ++++V DQ Sbjct: 121 NPLSVYGKSKYKGESDVLNAYEKSYVIRTSWVFGIANNNFNKQVINWSKAKNKLNIVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + +A ++ T G++H++ + G S + A+Y+ + G Sbjct: 181 VSVPTYSKDLAEFSWELIK-------TGKFGLYHIS-NSGECSKFEQAKYVLEKIGWNGK 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + TK + A R Y+ L K +I WK+ + L + Sbjct: 233 LETA----KTKDFKLPAARAEYTKLSSEKTEKLLGKKIPDWKDAIDRFLQEM 280 >gi|116074423|ref|ZP_01471685.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9916] gi|116069728|gb|EAU75480.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9916] Length = 295 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 106/295 (35%), Positives = 148/295 (50%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + + VE+I R + DL + PD ++N AY Sbjct: 1 MKILLTGAAGQLGQALIASVPEGVELIATSRQEFDLADAEACRDAVFHHQPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A ++N+ A A A G + +STD+VF+G +P +P Sbjct: 61 TAVDKAESERDLAHAVNSGAPEAFANALGERGGRMLQLSTDFVFNGNQGSPYTVDQARDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 L +YG SK AGE V +LRT+WV G NF L+MLRL +ER E++VV D Sbjct: 121 LGVYGASKAAGEAAVQERLGRQGTGFVLRTSWVIGPVGKNFALTMLRLHRERDELAVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G P+S L +A+A Q + I N L + H + D G SW D A + S G Sbjct: 181 QVGCPSSTLNLAQACWQAIN--INNKGVELPPVMHWS-DAGAASWYDVAVAVGDISQNLG 237 Query: 238 GP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T YPT A RP+YS LDC + W+ + +IL + Sbjct: 238 LLDQPAHVKPITTADYPTPARRPSYSLLDCCSTRAALQLPCQHWQAALHDILQRV 292 >gi|291547964|emb|CBL21072.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus sp. SR1/5] Length = 283 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NGQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 3 KVWIAGANGQIGRALNDVLDPMQIETLNTDLDELDITDTDEVINFGSINRPDVIINCTGI 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D+ E PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TNP Sbjct: 63 TDTDECEKNPEHAYRVNALGARNLSIVARKCGAKIVQLSTDDVFDGKSKKPYTEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L A++ + +SV DQFG Sbjct: 123 LTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGKGGNNFVNRVLETAEKGQALSVASDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +AR I+ + DT+ G +H+T G + +FA I + G Sbjct: 183 SPTSAKDLARMILYLI-------DTNEYGTYHVTC-SGVCNRYEFATEILRLA----GKE 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + T+Q + RP Y+ LD L + WK ++ + Sbjct: 231 IELRSVPTEQSDLSSVRPPYAVLDNFILRIIEVYDMPDWKASLKEYMDE 279 >gi|115345654|ref|YP_771835.1| dTDP-4-dehydrorhamnose reductase [Roseobacter denitrificans OCh 114] gi|115292975|gb|ABI93427.1| dTDP-4-dehydrorhamnose reductase [Roseobacter denitrificans OCh 114] Length = 307 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 121/290 (41%), Positives = 162/290 (55%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L+ + + +GR DL P + D +IN AAY Sbjct: 27 MKILVFGQTGQVATELAQL----DGVTCLGREQADLSDPGACEAVIAGCDADAVINAAAY 82 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE++ + A +NA A+A AA + GIP ++ISTDYVFDG + P +PT P Sbjct: 83 TAVDKAEEDRDTAMIVNAMAPTAMAAAAAARGIPFVHISTDYVFDGSGQRPWQPDAPTGP 142 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SKL GE+ VA+ + ILRT+WV+S G+NF+ +M RL ER +++V DQ G Sbjct: 143 LGVYGASKLGGEKGVAAAGGAHAILRTSWVFSAHGANFVKTMRRLGAERDALTIVADQIG 202 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA ++IA L + D S G +H + +SWADFA IF +S G Sbjct: 203 GPTPARDIAAVCVEIARALTQ--DPSKSGTYHFSG-APDISWADFAREIFAQS----GLS 255 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T QYPT A RP S LDCS T I W+ G+ +L ++ Sbjct: 256 VDVTDIPTSQYPTPAQRPLNSRLDCSTTTATFGIPRPDWRTGLAGVLSDL 305 >gi|320185806|gb|EFW60560.1| dTDP-4-dehydrorhamnose reductase [Shigella flexneri CDC 796-83] Length = 277 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 103/258 (39%), Positives = 148/258 (57%), Gaps = 5/258 (1%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D P+ A PDVI+N AA+TAVDKAE EPE A +NA +IAK A+ +G Sbjct: 17 DFSNPEGVAETVKRIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAW 76 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 I+ STDYVF G TP E T PLN+YG++KLAGE+ + + ++I RT+WVY+ Sbjct: 77 VIHYSTDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAK 136 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G+NF +MLRLAKER E++V+ DQFG PT A +A + + + G++H+ Sbjct: 137 GNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLV 194 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 A G +W D+A +F E+ + G P + K+ + T YPT A RP S L+ K Sbjct: 195 A-SGTTTWHDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNF 253 Query: 273 NIRISTWKEGVRNILVNI 290 + + W+ GV+ +L + Sbjct: 254 ALVLPDWQVGVKRMLNEL 271 >gi|317048790|ref|YP_004116438.1| dTDP-4-dehydrorhamnose reductase [Pantoea sp. At-9b] gi|316950407|gb|ADU69882.1| dTDP-4-dehydrorhamnose reductase [Pantoea sp. At-9b] Length = 295 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 106/296 (35%), Positives = 154/296 (52%), Gaps = 9/296 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL----KPKDFASFFLSFSPDVIIN 56 M L+ G NGQ+ L + + R +D P A L PDVI+N Sbjct: 1 MNILLFGRNGQVGWELQRSLAPLGNVTVLDRHSVDYCGDFENPAGIAESILKIKPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVDKAE + E A +NA A+A+AA I ++ STDYVFDG TP E Sbjct: 61 ATAYTAVDKAETDVEKARLVNATSVQAMAEAAKKINALVVHYSTDYVFDGSGTTPWTETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN YG +K GEE + + + Y+I RT+WVY+ G+NF +M+RLA++R +SV+ Sbjct: 121 TTAPLNTYGLTKREGEEAIIAAASKYLIFRTSWVYAAKGNNFAKTMIRLAQDREALSVID 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT A IA + +D + G++H+ A G +W +AE + ++ Sbjct: 181 DQYGAPTGAELIADCTAHAIQ--LTLADPNKSGVYHLIA-SGITTWHAYAETVIDYVRQK 237 Query: 237 GGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G P V ++ T +PT A RP+ S L+ K + + + WK GV +L + Sbjct: 238 GLPLKVEVVNKVATSAFPTPAKRPSNSRLNTEKFTSAFQLNLPDWKLGVIRMLDEL 293 >gi|330368663|gb|AEC11784.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] Length = 286 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 104/286 (36%), Positives = 153/286 (53%), Gaps = 11/286 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 +IG NG +AQ + + ++ +ID+ +F + IIN +AYT Sbjct: 2 IWIIGKNGMLAQDILQVFNKNNIEYTSTASNIDITNIDILNNFIKDKNIKTIINCSAYTK 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AEDE +I + +N EG I + A +I I+ STDYVFDG + P +E TNP+N Sbjct: 62 VDLAEDEKDICYKVNGEGVKNITEIASNINADLIHFSTDYVFDGENNKPYNEEDKTNPIN 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYGKSKL GE+ SY + VI R +W+Y I+G NF+ +M+ L + I VV DQFG+P Sbjct: 122 IYGKSKLEGEKYALSYNKSIVI-RVSWLYGIYGKNFVYTMINLMNSKESIKVVNDQFGSP 180 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GPY 240 T +A I I N + G++H T + G +SW DFA+ I+ + E Sbjct: 181 TYTEDVAMVIYDIIKN-----NNFYYGLYHYTNE-GDISWYDFAKTIYNKGKEYNIINND 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV T++YPTKA RP YS L K+ ++I +++ + + Sbjct: 235 CKVNPCTTEEYPTKAKRPKYSVLSVEKIKRY--VKIYNYEDSLNSF 278 >gi|580881|emb|CAA51629.1| ipa-73d [Bacillus subtilis subsp. subtilis str. 168] Length = 432 Score = 287 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 14/277 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L Q E+I + + +++ + F + PD+++N AA+ Sbjct: 3 KVLVTGAGGQLGLELCRQLKQAGYEVIALTKKMMNIADQRSVRHSFGHYQPDIVVNSAAF 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VD+ E E + A+ IN GA A + IG ++ISTDYVF+G P E P +P Sbjct: 63 TSVDQCEKELDKAYLINGIGAYYTALESTRIGAQYVHISTDYVFNGKGTQPYREDDPLDP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSK GEE + T + I+RT+WVY GSNF+ +ML+LA+ ++E+ VV DQ G Sbjct: 123 KTIYGKSKRLGEELIRLTTKDSTIIRTSWVYGHGGSNFVETMLKLAETKQELRVVSDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A+I++ + GI+H++ + G SW +FA I ES G Sbjct: 183 SPTYTKDLAEAVIKL--------FSHPPGIYHVS-NSGICSWYEFATAIMEES----GLE 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + + + T++Y K RPAYS L + + + Sbjct: 230 TAILSVTTEEYGNKTPRPAYSVLSHRAIEEAASAPPT 266 >gi|306842187|ref|ZP_07474856.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. BO2] gi|306287774|gb|EFM59205.1| dTDP-4-dehydrorhamnose reductase [Brucella sp. BO2] Length = 249 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 114/248 (45%), Positives = 155/248 (62%), Gaps = 1/248 (0%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S + PD++++ AAYTAVD AEDE E+AF++NA GA A+A+A+ + G+P I++STDY Sbjct: 2 RSAIEAIKPDLVVSAAAYTAVDLAEDEQELAFAVNAIGAEAVAEASKNCGVPVIHLSTDY 61 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF G + P E T P ++YG+SKL GE VA ++ILRTAWVYS FG NF+ +M Sbjct: 62 VFAGDADEPYAETDVTGPRSVYGRSKLEGERLVAHANPRHIILRTAWVYSPFGKNFVKTM 121 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L+LA+ R +SVV DQ+G PTSAL IA AIIQ+A +L + S G++H+ G +W Sbjct: 122 LKLAETRGALSVVSDQWGNPTSALDIADAIIQVADHLAATPEFSAYGVYHLVG-AGDTNW 180 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + FA IF ESA GGP + V I T YPTKA RP S L K S W+ Sbjct: 181 SGFARAIFDESARLGGPTATVTDIATADYPTKAARPMNSRLSTEKFQAAFGWSPSHWEAS 240 Query: 283 VRNILVNI 290 + ++ + Sbjct: 241 LAQVMKRL 248 >gi|115358134|ref|YP_775272.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115283422|gb|ABI88938.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 294 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 151/291 (51%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDIADADAVRRALEEHRAALVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A ++GIP I++STDYVFDG E + P Sbjct: 60 TAVDRAETEPDAAWQANRDGPAVLANACAALGIPLIHLSTDYVFDGRMPGAYAETAAVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG SKLAGEE V + ++ILR AWV+ G+NF+ +MLR+ +ER + VV DQ+ Sbjct: 120 LGVYGCSKLAGEEAVRERLPDRHLILRVAWVFGAHGNNFVRTMLRVGRERDVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA ++ IA +T G +H+ +W FAE IF E+ G Sbjct: 180 GGPTHAGAIADTLLTIAARY-RAGETLRWGTYHLCG-TPVTTWHGFAETIFTEARRTGLI 237 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I T YP A RPA S LDCS+L I +W G+ +L Sbjct: 238 DRVPVVRPIRTDAYPLPAPRPANSALDCSRLREHFGIESPSWLAGLTEVLA 288 >gi|229489527|ref|ZP_04383390.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121] gi|229323624|gb|EEN89382.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus erythropolis SK121] Length = 279 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 12/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G GQ+ + ++ + VG ++D+ + F S V+IN AAY Sbjct: 3 NILLTGARGQLGTRIDALATSAGHTVTAVGSRELDITDSRAVDDFVSPGS--VLINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + E A ++N G +A+A +G I++STDYVF G + +P D +PT P Sbjct: 61 TAVDAAETDQEAARAVNEIGPRNLAQACARVGSRLIHVSTDYVFPGDASSPYDVDAPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG++KL GE V + ++RTAWVYS G++F+ +M RL ER ++VV DQ G Sbjct: 121 ATVYGRTKLDGEIAVRESGADAAVVRTAWVYSGVGTDFVATMRRLEAEREFVNVVDDQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT ++ +A I+++A + T FH+T +GG SW + A +F E G Sbjct: 181 SPTYSVDLAGGIVELALLDFTGAST-----FHVT-NGGQASWYELARAVFEEI---GADP 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 ++V + ++ A RPAYS L + W+E + L Sbjct: 232 ARVRPCSSAEFVRPAPRPAYSVLSERAWVTAGMTPLRPWREALHAALA 279 >gi|310814582|ref|YP_003962546.1| dTDP-4-dehydrorhamnose reductase [Ketogulonicigenium vulgare Y25] gi|308753317|gb|ADO41246.1| dTDP-4-dehydrorhamnose reductase [Ketogulonicigenium vulgare Y25] Length = 283 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 118/290 (40%), Positives = 163/290 (56%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L S+ E++ + R DLL P + PD IIN AA+ Sbjct: 1 MKILVFGRTGQVATELQSLVP---EVVFLDRTQADLLDPASCVTAINRHRPDAIINAAAW 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A IN + A+A+AA ++ +P I+ISTDYVF+G TP PT P Sbjct: 58 TAVDKAETEEGSAALINGDAPAAMARAAAALDVPFIHISTDYVFNGGGNTPFKPDDPTAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++K GE V + Y ILRT+WV+S G+NF+ +MLRL +R ++VV DQ G Sbjct: 118 LGAYGRTKRLGEVGVEAAGGRYAILRTSWVFSAHGANFVKTMLRLGAQRDRLNVVADQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA+A +++A +L + S GI+H + VSWADFA I + Sbjct: 178 GPTSARAIAQACLRMAEHLAAAPNLS--GIYHFSGTPD-VSWADFARAIMAAAQ----LP 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + YPT A RP S LDCS LA ++ W++ + +L + Sbjct: 231 CTIHDIPSTDYPTPAARPLNSRLDCSSLAR-FDLTRPDWQQDLLVVLNEL 279 >gi|297569787|ref|YP_003691131.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] gi|296925702|gb|ADH86512.1| dTDP-4-dehydrorhamnose reductase [Desulfurivibrio alkaliphilus AHT2] Length = 298 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 155/293 (52%), Gaps = 8/293 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF-SPDVIINPAAYT 61 L+ G GQ+ L ++ + R ++DL + + + P ++N AYT Sbjct: 6 LLLFGAEGQVGWELQRSLAVLGPVLALTRREVDLSDREAVRAAIRAAGRPAAVVNAGAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAEDE E A+++NA A+A A +IG+P ++ STDYV++G P E +P Sbjct: 66 AVDKAEDEAETAYAVNAAVPAAMAAEAKAIGVPLVHFSTDYVYNGDKAGPYLESDAPDPQ 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SKL G+ + + ++ILRT WVY+ G NFL +MLRLA ER ++ V+ DQ G Sbjct: 126 SVYGRSKLEGDAAIIASGVEHLILRTTWVYAARGGNFLRTMLRLAGERDQLRVIADQVGA 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PTSA +A ++ + G++H TA G SW +A +I E+A G P Sbjct: 186 PTSAELLADITAHALRLML--GGKAGGGLYHCTA-AGETSWHGYARFIVAEAAALGRPLL 242 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T+ YP A RP S LDC +L + + W+ V+ L + Sbjct: 243 VKPEQIEPIPTEAYPLPAKRPKNSRLDCRRLEAAFGLVMPPWQFHVQRTLKEL 295 >gi|154151292|ref|YP_001404910.1| dTDP-4-dehydrorhamnose reductase [Candidatus Methanoregula boonei 6A8] gi|153999844|gb|ABS56267.1| dTDP-4-dehydrorhamnose reductase [Methanoregula boonei 6A8] Length = 283 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 150/291 (51%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G NGQ+ Q + +C Q+ ++ I G ++++ + F DVIIN AA Sbjct: 1 MRVLITGVNGQLGQDIRKVCEQNSIDHIATGSKELNISNVSEVQHFVKKNPVDVIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVD AE E + A+ +N G +A AA+S+G ++ STDYVFDG SR P Sbjct: 61 YNAVDLAETEWKKAYRVNGLGVRNLATAANSLGAVFVHFSTDYVFDGKSRLPYTIADLPR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG SKL GE + ++++RT+WV+ NF ++ +K + E+ VV DQ Sbjct: 121 PISRYGMSKLLGETMTRDIADTFILIRTSWVFGKGNDNFPKKIMGWSKNKTELKVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT +A+A + + + RG++H+T + G S ++AE++ + +G Sbjct: 181 ASPTYTADLAKATLDLILK-------NARGMYHIT-NSGYCSRYEWAEFLLAKVGWKGN- 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R + ++ + A RPAYS LD + WK+ L ++ Sbjct: 232 ---LVRGSSDEFMSAAQRPAYSVLDNFGTPECLGYSLPDWKDATERFLQDL 279 >gi|124021809|ref|YP_001016116.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] gi|123962095|gb|ABM76851.1| putative dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9303] Length = 311 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 108/301 (35%), Positives = 151/301 (50%), Gaps = 13/301 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G+ GQ+ Q L C DV ++ R ++L + + PD +IN AYT Sbjct: 4 RVLLTGSKGQLGQELIRSCPSDVALVACDRSQLNLEHADACQAIVETHRPDWVINAGAYT 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE EP IA +NA+G A+A G + +STD+VFDG TP +PL Sbjct: 64 AVDRAEQEPRIAQVVNADGPKALAVGLARHGGRMLQLSTDFVFDGQQGTPYHPQQCVSPL 123 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRL----AKERREISVVC 176 +YG SK AGEE V + + +LRT+W+Y GSNFL +MLRL A ++VV Sbjct: 124 GVYGASKAAGEEHVLNVLGDRAHVLRTSWLYGPVGSNFLRTMLRLHQSKAAAGEPLAVVS 183 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRG-----IFHMTADGGPVSWADFAEYIFW 231 DQ G PTS L +A A ++ + D ++ I H + D G SW DFA I Sbjct: 184 DQVGCPTSTLGLAAACWRLIQTASQVQDEWIQEQQLPSILHWS-DAGAASWYDFAVAIGE 242 Query: 232 ESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + V I T YPT A RP+YS LDCS + + W+ + +L Sbjct: 243 LGVAAGMLQHAADVKPITTADYPTPARRPSYSLLDCSGSSAALGLEPMYWRNELEGVLGE 302 Query: 290 I 290 + Sbjct: 303 L 303 >gi|260576536|ref|ZP_05844525.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sp. SW2] gi|259021259|gb|EEW24566.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sp. SW2] Length = 284 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G GQ+A+ L + Q +GR DL P+ + + +P+ +IN AAY Sbjct: 1 MRLLVFGQTGQVARELQRLAPQ---ARYLGRDAADLAHPETLGAILRAAAPEAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E A IN + A+A+A ++G+P ++ISTDYVFDG P PT P Sbjct: 58 TAVDRAETERSEALLINGQSPAAMAEACAALGVPFVHISTDYVFDGSGVQPFRPTDPTGP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE V + + +LRT+WV+S G+NF+ +MLRLA+ R ++VV DQ G Sbjct: 118 VNHYGHSKLVGEAGVRASGAVHAVLRTSWVFSAHGTNFVKTMLRLAQTRDRLTVVADQHG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IARA + +A L D + G++H +WA FA +F ++ Sbjct: 178 GPTPAAAIARACLTLAQTL--RDDPAKTGVYHFAG-APDTTWAGFAREVFAQAR----LA 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +PT A RP S LDC+ T + W+EG+R++L + Sbjct: 231 VAVEDISTSAFPTPAARPLNSRLDCTSTETTFGLPRPDWREGLRDVLKEL 280 >gi|160425319|gb|ABX39511.1| RmlD [Aeromonas hydrophila] Length = 300 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 8/295 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ L++G GQ+ ++L ++I +GR + D+ + PDVIIN Sbjct: 1 MRILLLGARGQLGRALFCALSVEFPHWQVIALGRKECDISDSDVLVDSMYAHHPDVIINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAYTAVD AE EPE+A +N + ++ + A+ +G ++ STDYVFDG P E Sbjct: 61 AAYTAVDAAETEPELADEVNHKALLSMDRGAEDLGALLVHFSTDYVFDGTGSQPWLETDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PLN+YG SK AGE + +++I+RT W+Y G +F ++L A + + VV D Sbjct: 121 PSPLNVYGASKYAGELAIQRLCPDHLIIRTGWLYGGEGKHFARTILARASQGLPLGVVAD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +ARA + ++ S G++H+T G SW FA + + RG Sbjct: 181 QWGAPTQVDWLARASVLALSQVV--RSPSKVGLYHLTC-RGETSWHGFASALVNGAHRRG 237 Query: 238 GPYSKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + ++P +A RP S LDCS + I + W E + N L + Sbjct: 238 WLKKQVAIRCIGSGEWPQQACRPLNSRLDCSLFSRVFGIDLPLWHEQMANWLTKL 292 >gi|118472789|ref|YP_886196.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str. MC2 155] gi|310947300|sp|A0QTF8|RMLD_MYCS2 RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|118174076|gb|ABK74972.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium smegmatis str. MC2 155] Length = 327 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 15/292 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G G + + L+ + ++ + D+ F + DV+IN AAY Sbjct: 35 RIVITGAGGMVGRVLADQAAAKGHTVLALTSSQCDITDEDAVRRFVANG--DVVINCAAY 92 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTN 119 T VDKAEDEPE A ++NA G G +AKA ++ I+ISTDYVF TP + T Sbjct: 93 TQVDKAEDEPERAHAVNAVGPGNLAKACAAVDAGLIHISTDYVFGAVDRDTPYEVDDETG 152 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQ 178 P+NIYG++KLAGE+ V + + ++RTAWVY GS+F+ +M RLA I VV DQ Sbjct: 153 PVNIYGRTKLAGEQAVLAAKPDAYVVRTAWVYRGGDGSDFVATMRRLAAGDGAIDVVADQ 212 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT + A++QI +E GI H A+ G S D A F G Sbjct: 213 VGSPTYTGDLVGALLQIVDGGVE------PGILH-AANAGVASRFDQARATFE---AVGA 262 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + ++P A RP+Y+ L + A + W+E +++ + + Sbjct: 263 DPERVRPCGSDRHPRPAPRPSYTVLSSQRSAQAGLTPLRDWREALQDAVAAV 314 >gi|148241182|ref|YP_001226339.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RCC307] gi|147849492|emb|CAK26986.1| Putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RCC307] Length = 292 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 103/295 (34%), Positives = 146/295 (49%), Gaps = 11/295 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + VE++ R ++DL P+ PD ++N AY Sbjct: 1 MKVLLTGCAGQLGQALVASAPDGVELLATSRAELDLADPEACCCIVEEQRPDWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++NA+ A A A G + +STD+VF+G P P P Sbjct: 61 TAVDQAEQEPALAEAVNAQAPAAFAAALKQTGGRLLQLSTDFVFNGAQGHPYGPKQPREP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL----AKERREISVVC 176 L +YG SK GE+ + +LRT+WVY G NF +MLRL AK + VV Sbjct: 121 LGVYGASKARGEQAALQH-PQARLLRTSWVYGPVGKNFCRTMLRLHAAKAKAGEPLRVVA 179 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PTS L +A+A + +D + H + D G SW DFA I + Sbjct: 180 DQVGCPTSTLTLAKACWRAIGI---GADPDGPRVLHWS-DAGAASWYDFAMAIGELAQAH 235 Query: 237 GGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V I T YPT A RP+YS LDC+ + W++ + +L Sbjct: 236 GLLRQAARVEPITTADYPTPATRPSYSLLDCTASRQALGLPAVHWRDALAEVLAR 290 >gi|53720293|ref|YP_109279.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei K96243] gi|53725965|ref|YP_103574.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 23344] gi|76812050|ref|YP_334533.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710b] gi|121601563|ref|YP_992266.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei SAVP1] gi|124384550|ref|YP_001028708.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10229] gi|126448714|ref|YP_001081386.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10247] gi|126454004|ref|YP_001067376.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106a] gi|134280118|ref|ZP_01766829.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 305] gi|167000833|ref|ZP_02266638.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei PRL-20] gi|167720869|ref|ZP_02404105.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei DM98] gi|167739851|ref|ZP_02412625.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 14] gi|167817073|ref|ZP_02448753.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 91] gi|167825483|ref|ZP_02456954.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 9] gi|167846973|ref|ZP_02472481.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei B7210] gi|167895555|ref|ZP_02482957.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 7894] gi|167912204|ref|ZP_02499295.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 112] gi|167920165|ref|ZP_02507256.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei BCC215] gi|237813505|ref|YP_002897956.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei MSHR346] gi|238560978|ref|ZP_00442592.2| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei GB8 horse 4] gi|242314991|ref|ZP_04814007.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106b] gi|254175751|ref|ZP_04882411.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 10399] gi|254180917|ref|ZP_04887515.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1655] gi|254191762|ref|ZP_04898265.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pasteur 52237] gi|254196080|ref|ZP_04902505.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei S13] gi|254202264|ref|ZP_04908627.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei FMH] gi|254207597|ref|ZP_04913947.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei JHU] gi|254258629|ref|ZP_04949683.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710a] gi|254298970|ref|ZP_04966420.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 406e] gi|254356501|ref|ZP_04972777.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei 2002721280] gi|3135677|gb|AAD05457.1| putative dTDP-4-keto-L-rhamnose reductase [Burkholderia pseudomallei 1026b] gi|52210707|emb|CAH36691.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei K96243] gi|52429388|gb|AAU49981.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 23344] gi|76581503|gb|ABA50978.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710b] gi|121230373|gb|ABM52891.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei SAVP1] gi|124292570|gb|ABN01839.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10229] gi|126227646|gb|ABN91186.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106a] gi|126241584|gb|ABO04677.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei NCTC 10247] gi|134248125|gb|EBA48208.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 305] gi|147746511|gb|EDK53588.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei FMH] gi|147751491|gb|EDK58558.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei JHU] gi|148025498|gb|EDK83652.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei 2002721280] gi|157808904|gb|EDO86074.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 406e] gi|157939433|gb|EDO95103.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pasteur 52237] gi|160696795|gb|EDP86765.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei ATCC 10399] gi|169652824|gb|EDS85517.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei S13] gi|184211456|gb|EDU08499.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1655] gi|237504413|gb|ACQ96731.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei MSHR346] gi|238525294|gb|EEP88722.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei GB8 horse 4] gi|242138230|gb|EES24632.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1106b] gi|243063263|gb|EES45449.1| dTDP-4-dehydrorhamnose reductase [Burkholderia mallei PRL-20] gi|254217318|gb|EET06702.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 1710a] Length = 298 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 150/296 (50%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIF--WESAER 236 PT A IA + G++HMT+ G SW FA+ I W +A Sbjct: 181 APTWARSIADGTAHALTTAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIASWRAAPG 239 Query: 237 GGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S++ I YP A RPA S L L I + W+ V + ++ Sbjct: 240 AAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYAVGLCVNDL 295 >gi|225350727|ref|YP_002720716.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae WA1] gi|225216411|gb|ACN85144.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae WA1] gi|330368658|gb|AEC11780.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] gi|330368668|gb|AEC11788.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] gi|330368673|gb|AEC11792.1| dTDP-4-keto-L-rhamnose reductase [Brachyspira hyodysenteriae] Length = 286 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 102/286 (35%), Positives = 152/286 (53%), Gaps = 11/286 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 VIG NG +AQ + ++ +ID+ +F + IIN +AYT Sbjct: 2 IWVIGKNGMLAQDILKAFNKNNIEYTSTASNIDITNIDILNNFIKDKNIKTIINCSAYTK 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AEDE +I + +N EG I + A +I I+ STDYVFDG + P +E TNP+N Sbjct: 62 VDLAEDEKDICYKVNGEGVKNITEIASNINADLIHFSTDYVFDGENNKPYNEEDKTNPIN 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYGKSKL GE+ + N +++R +W+Y I+G NF+ +M+ L + I VV DQFG+P Sbjct: 122 IYGKSKLEGEKYAL-FYNKAIVIRVSWLYGIYGKNFVYTMINLMNSKESIKVVNDQFGSP 180 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GPY 240 T +A I I N + G++H T + G +SW DFA+ I+ + E Sbjct: 181 TYTEDVAMVIYDIIKN-----NNFDYGLYHYTNE-GNISWYDFAKTIYNKGKEYNIINND 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV T++YPTKA RP YS L K+ ++I +++ + + Sbjct: 235 CKVNPCTTEEYPTKAKRPKYSVLSVEKIKRY--VKIYNYEDSLNSF 278 >gi|126440197|ref|YP_001060113.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 668] gi|126219690|gb|ABN83196.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei 668] Length = 300 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 112/296 (37%), Positives = 150/296 (50%), Gaps = 7/296 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G NGQ+ L+ +++ + R DL +P+ A PDV++N AAY Sbjct: 1 MKILVTGANGQVGWELARSLAVLGQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + A IN E G +A A +G ++ STDYVFDG +P E PT P Sbjct: 61 TAVDAAETDGAAANVINGEAVGVLAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL GE VA +++ RT WV++ G NFL +MLRLAKER E+ +V DQFG Sbjct: 121 VNAYGASKLLGELAVAETGGDWLTFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTS--LRGIFHMTADGGPVSWADFAEYIF--WESAER 236 PT A IA + G++HMT+ G SW FA+ I W +A Sbjct: 181 APTWARSIADGTAHALTTAMRERAAGAFTSGVYHMTS-AGQTSWHGFADAIIASWRAAPG 239 Query: 237 GGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P S++ I YP A RPA S L L I + W+ V + ++ Sbjct: 240 AAPLAVSRIVPIPASAYPVPAQRPANSVLSNKALKERFGIELPDWRYAVGLCVNDL 295 >gi|295109349|emb|CBL23302.1| dTDP-4-dehydrorhamnose reductase [Ruminococcus obeum A2-162] Length = 283 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G GQI ++L+ + +E + ++D+ + +F PDVIIN Sbjct: 3 KVWIAGAGGQIGRALNDVLDPMQIEALNTDVNELDITDTDEVINFGTVNRPDVIINCTGI 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T D+ E+ PE A+ +NA GA ++ A G + +STD VFDG S+ P EF TNP Sbjct: 63 TDTDECEENPEHAYRVNALGARNLSIVARKCGSKIVQLSTDDVFDGQSKKPYTEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG+SK AGE V +T+ + I+R+ WVY G+NF+ +L + R +SV DQFG Sbjct: 123 LTVYGRSKRAGENYVKEFTHKHFIIRSNWVYGHGGNNFVNRVLEATESGRTLSVASDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA +AR I+ + T+ G +H+T G + +FA+ I + G Sbjct: 183 SPTSAKDLARMILYLI-------STNEYGTYHVTC-SGICNRYEFAQEILRLA----GKT 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + T+Q + RP Y+ LD L + WKE ++ + Sbjct: 231 IELKSVPTEQSDLSSVRPPYAVLDNFILRIIEMYDMPEWKESLKEYMDE 279 >gi|83944593|ref|ZP_00957043.1| hypothetical protein EE36_00250 [Sulfitobacter sp. EE-36] gi|83844570|gb|EAP82457.1| hypothetical protein EE36_00250 [Sulfitobacter sp. EE-36] Length = 288 Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 116/290 (40%), Positives = 161/290 (55%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G++GQ+A L ++ DV+I + R D DL P A+ + +PD +IN AAY Sbjct: 1 MKILVFGHSGQVATELRALDGDDVQITALARADADLTDPAACAAAIDARAPDAVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A INA+ A+A+A + IP + ISTDYVF G TP T+P Sbjct: 61 TAVDKAESDTDTAQIINADAPAAMAQACAAHDIPFVSISTDYVFSGAEDTPWAPADATDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG++K GE + Y +LRT+WV S G+NF+ +MLRL ER +++V DQ G Sbjct: 121 QSVYGRTKRDGEVAIVKAGGRYAVLRTSWVVSAHGNNFVKTMLRLGAEREALTIVADQIG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +IA+A + I LI S GI+H + SWADFA IF + Sbjct: 181 GPTGAAEIAQACVIIVKTLISQPRKS--GIYHFSG-APDTSWADFARAIFDAAK----IP 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ I W+E + +IL+ + Sbjct: 234 CAVTDIPSTDYPTPAKRPQNSRLDCTTTDAAFGISRPDWRESLTHILLKL 283 >gi|84515470|ref|ZP_01002832.1| hypothetical protein SKA53_02391 [Loktanella vestfoldensis SKA53] gi|84510753|gb|EAQ07208.1| hypothetical protein SKA53_02391 [Loktanella vestfoldensis SKA53] Length = 289 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 125/290 (43%), Positives = 168/290 (57%), Gaps = 7/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+A +L+ D+ I +GR DL P A+ DV+IN AAY Sbjct: 2 MHVLVFGQTGQVATALAQQTCADITITCLGRDRADLTDPAACAAIIAQTHADVVINAAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP++A +INA A+A+A + IP ++ISTDYVF G P PT P Sbjct: 62 TAVDRAESEPDLARAINATAPAAMARACAARKIPFLHISTDYVFGGSGSRPWQVDDPTGP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L IYG++KLAGE+ V + +VILRT+WV+S G+NF+ +MLRL R +I+VV DQ G Sbjct: 122 LGIYGQTKLAGEDAVRAAAGAHVILRTSWVFSAHGANFVKTMLRLGAMRPDINVVADQHG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A IA A+I IA ++ + G +H + VSWA FA IF + G Sbjct: 182 GPTAADDIAAALISIARAF--HTGRGISGTYHFSG-SPNVSWAGFARTIFASA----GID 234 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S LDCS LA + I W+ +R++L ++ Sbjct: 235 CAVQDIPTSAYPTPAARPANSRLDCSALARDYAIAQPDWQGSLRHVLQSL 284 >gi|221633639|ref|YP_002522865.1| dTDP-4-dehydrorhamnose reductase [Thermomicrobium roseum DSM 5159] gi|221156137|gb|ACM05264.1| dTDP-4-dehydrorhamnose reductase [Thermomicrobium roseum DSM 5159] Length = 281 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ ++L E+I +G + D+ P + P ++I+ AA+T Sbjct: 3 RVLITGGHGQLGRALVRTAPAHTEVIALGAAECDVTDPFTVRAVLARVEPTLVIHCAAWT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD E PE A+ +NA G IA A + + +ST+YVFDG P EF+ +PL Sbjct: 63 DVDGCERHPERAWRVNALGTQHIAAACAAAEAALVALSTNYVFDGEQDEPYHEFARPHPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SKLA EE V + + I+RTA +Y G NF+ ++LRLA+E+ + +V DQ+G+ Sbjct: 123 SVYGASKLAAEEVVRALCPRHYIVRTAMLYDAHGRNFVTTVLRLAREQPRLRMVADQYGS 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A+AI Q+ G +H+ + G SW ++A + E G Sbjct: 183 PTFVDDLAKAIWQLVAQ-------PAYGTYHLV-NAGRASWYEWAVAVL----ETLGLGV 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I Q+ A P L S A I + W++ + L + Sbjct: 231 PVEPIPASQFRRAARPPRNGVL-TSLAAPALGIVLPDWRDALTRCLAPL 278 >gi|218530623|ref|YP_002421439.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218531918|ref|YP_002422734.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218522926|gb|ACK83511.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] gi|218524221|gb|ACK84806.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium chloromethanicum CM4] Length = 296 Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 103/291 (35%), Positives = 145/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGVRVHAPDRQSLDITDEAAVAAALDARTYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAESEVVAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G FH D G +W DFA I SA RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDEAAPTGTFHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S L L + + + +W+ + +IL + Sbjct: 239 SVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDILDRL 289 >gi|325268093|ref|ZP_08134739.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] gi|324980478|gb|EGC16144.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] Length = 302 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 108/288 (37%), Positives = 167/288 (57%), Gaps = 5/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQI + L+++ ++ R +D+ + D L+F PDVIIN AAY Sbjct: 13 MKYLITGAGGQIGRRLTALLHGKADVFAADRRTLDITRRDDVLQAALAFRPDVIINAAAY 72 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE EPE AF++NA GA +A+AA ++G + ISTDYVF G P E +P Sbjct: 73 TAVDDAEREPEAAFAVNAAGAAHLAQAAQTVGAAMVQISTDYVFGGHRAAPYRETDLPSP 132 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG+SK AGE+ V + ++I+RTAWV+ G NF+ ++L+L + + ++VV DQ G Sbjct: 133 LNVYGQSKYAGEQAVQAACARHLIVRTAWVFGKHGGNFVKTLLQLGRRQPVLNVVDDQRG 192 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A A A++ +A+ ++ + G++H D VS +FA + ++A +G Sbjct: 193 NPTYADDAAAALLHMANQSVQGNAA--WGVYHFAGDT-AVSRDEFARAVLVQAAAQGLLP 249 Query: 241 --SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + ++ YP+ A RPA S LDC K+ I S W+ + ++ Sbjct: 250 RVPEVRPVSSRDYPSAAERPADSRLDCRKVQAAFGIAPSDWRAALHDL 297 >gi|182439721|ref|YP_001827440.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseus subsp. griseus NBRC 13350] gi|62896327|emb|CAH94328.1| dTDP-L-rhamnose synthase StrL [Streptomyces griseus subsp. griseus] gi|178468237|dbj|BAG22757.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 304 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 88/286 (30%), Positives = 136/286 (47%), Gaps = 8/286 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + +GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTALGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL E+ + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEAEQDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALARETFRL---LGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++V + A RP YS LD S+ + W+ + Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSRWKAAGLEPLRHWRAALTE 287 >gi|240138981|ref|YP_002963456.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] gi|240008953|gb|ACS40179.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] Length = 296 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGVRVHAPDRQSLDITDEAAVAAALDACTYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAESEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRL+ ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLSGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G FH D G +W DFA I SA RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDEAAPTGTFHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YPT A RP S L L + + + +W+ + +IL + Sbjct: 239 SVPIEGIPSSAYPTPARRPVNSRLSSQSLTDAYGLAPRSWEPALDDILDRL 289 >gi|88860051|ref|ZP_01134690.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas tunicata D2] gi|88818045|gb|EAR27861.1| dTDP-4-dehydrorhamnose reductase [Pseudoalteromonas tunicata D2] Length = 289 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 110/289 (38%), Positives = 159/289 (55%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+IG GQ+AQ+L + ++E++ VG + D+ + S F P+VIIN AAYT Sbjct: 7 KVLIIGRKGQLAQALLATKKANIEVLVVGSNEFDVTQLGTLRSIINQFKPEVIINAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE PE A+ INA+ +AK I I +STDYVFDG +TP PL Sbjct: 67 AVDLAESNPERAYLINADLVTFLAKICQLQRIRFIQLSTDYVFDGEQQTPYTVGDLPKPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SK AGE V ++ ++ ++RT+W+YS+ G+NFLL+MLRL +ER + +V DQ G Sbjct: 127 NVYGASKRAGEMAVLTHCPDFGSVVRTSWLYSLCGNNFLLTMLRLMQERPALEIVNDQVG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 +PTSA+ +A + + + I+H + G SW DFA I + G Sbjct: 187 SPTSAITLADFLWSLIDL------PNWLPIYHFSGQ-GQGSWFDFAVEIQHVAHSAGLLS 239 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I + Q+ T A RP YS LDCS + + W+E + +L Sbjct: 240 YLIPIKPICSAQFHTAAIRPCYSVLDCS--GSNGIYHMRPWQETLNVLL 286 >gi|302340707|ref|YP_003805913.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] gi|301637892|gb|ADK83319.1| dTDP-4-dehydrorhamnose reductase [Spirochaeta smaragdinae DSM 11293] Length = 293 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 95/295 (32%), Positives = 148/295 (50%), Gaps = 14/295 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFF-LSFSPDVIINPAAY 60 ++G G + + +S + + ++ I ++D+ + F S D IIN Y Sbjct: 2 IWLVGCKGLLGREVSDVLERKQLQCIGTDI-EVDITDSEVVKKFVARQNSIDWIINCVGY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS---RTPIDEFSP 117 TAVDKAEDEPE A +N G + AA+ IG I++STDYVF P++E P Sbjct: 61 TAVDKAEDEPEAAEKLNVLGPRYLGMAAEEIGARIIHVSTDYVFGSTGDSIDRPLEERDP 120 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P +YG++KLAGE + T I+RTAW+Y +G NF+ SML+L KER + VV D Sbjct: 121 TAPECVYGRTKLAGEFAIKKATRRAFIIRTAWLYGTWGKNFVFSMLQLFKERSMVKVVRD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT + +A +++I ++ G++H GG SW +F+ I + E G Sbjct: 181 QIGCPTWSRVMAEFLVEIIER-----NSDNYGVYHFCG-GGQASWYEFSLEIARLAQELG 234 Query: 238 GPYSKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + ++ ++A RP +S L I+ W+E + + I Sbjct: 235 IQKKRVLIEPCTSDEFASRAKRPKWSVLSTVATEAAFGIKTKPWQESLGEFMSMI 289 >gi|254516000|ref|ZP_05128060.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR5-3] gi|219675722|gb|EED32088.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium NOR5-3] Length = 298 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 161/291 (55%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G GQ+ +L +E+ + R D D+ + + PD++IN AAYT Sbjct: 8 KVMISGAAGQLGSALCLSAPPSIELCALSRADCDISDSTAVEAALDAQRPDLLINAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE+E AF+ NAE G +A+A + GI ++STD+VFDGL +P E + T PL Sbjct: 68 AVDRAEEESAAAFAANAEAPGTLARACAARGIRFFHVSTDFVFDGLRSSPYPEDAATAPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AGE+ + +ILRT WVYS G NF+ +MLRL EISVV DQ GT Sbjct: 128 GVYGESKRAGEQATLDSGADCLILRTGWVYSHDGQNFMRTMLRLHGSHDEISVVADQVGT 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT AL +A A+ AH L GI+H + D G SW DFA I E+ G Sbjct: 188 PTDALSLAGALWAAAHR------PGLSGIYHWS-DAGVCSWYDFALAIGEEAFALGLLPK 240 Query: 241 -SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I TK YPT A RPAYS LD ++ I + W+ +R +L + Sbjct: 241 VAAVKPIRTKDYPTPAQRPAYSVLDKTRSWQDFEIPPTHWRSQLRAVLTRL 291 >gi|167628911|ref|YP_001679410.1| dtdp-4-dehydrorhamnose reductase [Heliobacterium modesticaldum Ice1] gi|167591651|gb|ABZ83399.1| dtdp-4-dehydrorhamnose reductase [Heliobacterium modesticaldum Ice1] Length = 311 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 110/295 (37%), Positives = 157/295 (53%), Gaps = 9/295 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+A L + +G ++D+ + PD ++N AAYT Sbjct: 12 LLITGANGQVAYDLLRRLPSHYHWVALGSNELDIRDSQQVHQRIRQIWPDWVVNLAAYTK 71 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSI-----GIPCIYISTDYVFDGLSRTPIDEFSP 117 VD AE E E A+++N G +A+A + +++STD+VFDG +P P Sbjct: 72 VDLAEKEAETAYAVNMRGVEHLARALAAQRAATGKGWLLHVSTDFVFDGCHSSPYHPEHP 131 Query: 118 TNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 +P ++YG SK GE V + ++ILRTAWVY + G NF+ ++LRL ER E+ VV Sbjct: 132 ISPKSVYGDSKAKGEALVREWLPEAHIILRTAWVYGVHGHNFVKTILRLMSEREEVRVVA 191 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ GTPT + +A I+ I +++ SL G +H T D G VSW DFA I E+A Sbjct: 192 DQVGTPTWSGALADVILSIIRQVVDRQKCQSLAGTYHFT-DAGAVSWYDFAVAIAEEAAA 250 Query: 236 RGGP-YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G P +KV I T YPT A RPAYS LD + +I+ W+E +R +L Sbjct: 251 MGYPVRAKVLPIRTVDYPTPAQRPAYSVLDKTDTWRIFSIQPVHWREHLRKMLGE 305 >gi|88705329|ref|ZP_01103040.1| dTDP-4-dehydrorhamnose reductase [Congregibacter litoralis KT71] gi|88700419|gb|EAQ97527.1| dTDP-4-dehydrorhamnose reductase [Congregibacter litoralis KT71] Length = 297 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 160/291 (54%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G GQ+ +L++ + + +GR D D+ P + + P ++IN AAYT Sbjct: 8 RVLVTGGGGQLGSALAATVPPSISLRALGRADCDISNPAAVDAALDAEEPQLLINAAAYT 67 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE++ + AF+ N E G + +A GI I++STD+VFDG +P +PT PL Sbjct: 68 AVDRAEEDADAAFAANGEAPGVLGEACARRGIRLIHVSTDFVFDGTRSSPYPVDAPTAPL 127 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AGE V + +++RT WVYS G NFL +MLRL EISVV DQ GT Sbjct: 128 GVYGRSKEAGERAVLDSGADALLVRTGWVYSHSGQNFLRTMLRLHGSHEEISVVSDQVGT 187 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A +A A + +L GI+H + D G SW DFA+ I E+ G Sbjct: 188 PTDAYSLAYA------LWAAAARPALGGIYHWS-DAGVCSWYDFAQAIGEEAHALGLLQA 240 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T+ YPT A RPAYS LD S + + W+ +R +L + Sbjct: 241 VARVKPIRTEDYPTPARRPAYSVLDKSLSWRDFEMPPTHWRSQLRAVLTRL 291 >gi|326780385|ref|ZP_08239650.1| dTDP-4-dehydrorhamnose reductase [Streptomyces cf. griseus XylebKG-1] gi|326660718|gb|EGE45564.1| dTDP-4-dehydrorhamnose reductase [Streptomyces cf. griseus XylebKG-1] Length = 304 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 8/286 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTAFGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL E+ + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEAEQDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALARETFRL---LGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++V + A RP YS LD S+ + W+ + Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSRWKAAGLEPLRHWRAALTE 287 >gi|312142998|ref|YP_003994444.1| dTDP-4-dehydrorhamnose reductase [Halanaerobium sp. 'sapolanicus'] gi|311903649|gb|ADQ14090.1| dTDP-4-dehydrorhamnose reductase [Halanaerobium sp. 'sapolanicus'] Length = 280 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 13/288 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+ +L ++ +++E R ++DL + + PD+II+ AA Sbjct: 1 MKVFLTGGTGQLGSALINLLRDKNIEYSAPTRKELDLKNKEKIKCSISKYKPDIIIHSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+KAE E ++A+ +N E IAK+ I +YIS+DYVFDG + + N Sbjct: 61 YTNVEKAELEKDLAYKVNVESTKWIAKSVKEIDAKLLYISSDYVFDGKKEEAYENYDLPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG +K GE+++ + T+ I+RT+W+Y G+NF+ ++L+L K ++I V+ DQ Sbjct: 121 PINYYGLTKYLGEKQIKTITDKAFIIRTSWLYGKNGNNFVKNILKLTKSNQKIKVIDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT +A I+ I T GI+H + G SW FA I Sbjct: 181 GSPTYTNDLAELILNIMK-------TKKYGIYH-AVNEGFCSWYHFALEIV----RAKNI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I ++++ + RP S L L N + +K+ ++ L Sbjct: 229 KVNVKAIKSEKFISNIKRPKNSRLSTKSLENNGFNLLRNYKKALKEYL 276 >gi|254295529|ref|YP_003061551.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] gi|254044060|gb|ACT60854.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] Length = 334 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 135/326 (41%), Positives = 180/326 (55%), Gaps = 37/326 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKD------FASFFLSFSPDV 53 MK V G NGQ+ ++L + QD +++ GRP +DL + D PDV Sbjct: 1 MKVFVTGENGQVVKALIKLADQDSLDVYTAGRPWLDLSELADDDKCEHLRLMIEDIGPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS----- 108 +IN AAYT VDKAE+E ++A ++N GAGA+A AA + +P I ISTDYVF G Sbjct: 61 VINAAAYTNVDKAEEEGDMAAAVNTTGAGAVAMAAAKLNLPIIQISTDYVFAGDKTADIY 120 Query: 109 -----------------------RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 E T+P +YG++KL GE+ A +VIL Sbjct: 121 DPENPEYADYDAEDLADIRANLSDGTYVETDATHPQGVYGQTKLEGEKLAAYVNPKHVIL 180 Query: 146 RTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD- 204 RTAWVYS G+NFL +MLR+ R E+ VV DQFG PT A IA+ I+++A N++E D Sbjct: 181 RTAWVYSETGNNFLKTMLRVGAARGELGVVNDQFGAPTHADAIAQGIVKVARNIVEQPDN 240 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 T L G+FHMT G SW FAE IF S GGP K+ I T++YP A RPA S LD Sbjct: 241 TELYGVFHMTC-RGYTSWHGFAEAIFKASELAGGPTPKLNSITTEEYPLPAPRPANSRLD 299 Query: 265 CSKLANTHNIRISTWKEGVRNILVNI 290 CSK+A HN+ + W++ V +V + Sbjct: 300 CSKIARVHNVELPQWQDMVMKTVVKV 325 >gi|29726012|gb|AAO88940.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Vibrio cholerae] Length = 284 Score = 284 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 11/288 (3%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPAAYTA 62 LV G+NG + + + D + I R ++D+ F +S +VIIN AA Sbjct: 3 LVTGSNGLLGSEIRRILGSD-KGIYTDRNELDVTDKNSIKKFLMSRKDIEVIINCAAGAN 61 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 + E+ E I + +A+ A GI I+ISTDYVFDG P E TN L+ Sbjct: 62 AEYIEENSEWGRRITVDAPMYLAQEAKENGIKLIHISTDYVFDGDRNVPYIESDYTNGLS 121 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+ K GE+ V ++ I+RTAW++S +F+ +M+RL++ R ++VV DQ G+P Sbjct: 122 LYGRFKAEGEQAVLKNSDTCAIIRTAWLFSEQMKDFIGAMVRLSETRDSVNVVFDQVGSP 181 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T +A II IA+NL + + IFH+T + G SW D A I E K Sbjct: 182 TYVPDLASHIITIANNL----NVGEKEIFHVTNE-GVCSWYDIACQIMRELK----IDCK 232 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + +Y TKA RP YS LD K+ ++ I + + + L NI Sbjct: 233 VKPIRSSEYKTKAARPHYSVLDKKKVKERFSLEIRHYSDALSECLKNI 280 >gi|119384852|ref|YP_915908.1| dTDP-4-dehydrorhamnose reductase [Paracoccus denitrificans PD1222] gi|119374619|gb|ABL70212.1| dTDP-4-dehydrorhamnose reductase [Paracoccus denitrificans PD1222] Length = 283 Score = 284 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 117/291 (40%), Positives = 163/291 (56%), Gaps = 11/291 (3%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +GQ+A L+ + E +GR +L A+ + ++N AA Sbjct: 1 MKGLLVFGRSGQVATELARLAP---EARFLGRDQAELTDAAACAAAIRASGCTAVLNAAA 57 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE EPE+A +INA+ A+A+ A IG+P ++ISTDYVFDG P E PT Sbjct: 58 YTAVDRAESEPELAHAINADAPAAMARTAAEIGVPFLHISTDYVFDGSGERPWSETDPTG 117 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG +KLAGE +A+ + ILRT+WV+S G+NFL +MLRL ER E+ VV DQ Sbjct: 118 PLGVYGATKLAGERGIAAAGGQWAILRTSWVFSAHGANFLKTMLRLGAEREELRVVADQQ 177 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A + + + +D + GI+H G SWA FA I ++ G Sbjct: 178 GGPTPAGDIAAACLAMLGAM--RADAARGGIYHFAG-GPDTSWAGFAREIMAQA----GL 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T YPT A RP S L+C+ ++ I W+ G+ +L + Sbjct: 231 SCRVTDISTADYPTPARRPVNSRLNCAAISRDFGIGRPDWRAGLAKVLQEL 281 >gi|254561589|ref|YP_003068684.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] gi|254268867|emb|CAX24828.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens DM4] Length = 296 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 146/291 (50%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + + + R ++D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGLRVHAPNRQNLDITDEAAVAAALDARTYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAETEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G FH D G +W DFA I SA RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDEAAPTGTFHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S L L + + + +W+ + +IL + Sbjct: 239 SVPVEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDILDRL 289 >gi|328954211|ref|YP_004371545.1| dTDP-4-dehydrorhamnose reductase [Desulfobacca acetoxidans DSM 11109] gi|328454535|gb|AEB10364.1| dTDP-4-dehydrorhamnose reductase [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 16/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +++G NG + + + + +++ +G ++D+ + P+V+IN AAY Sbjct: 1 MKIVLVGKNGLLGRECLLVLNRAHDLVALGSRELDITDAVQVEEAVRRYQPEVLINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 T VD AE E E+A+ +N G +A + G ++ISTD VFDG P E Sbjct: 61 TRVDAAEQERELAYRVNVVGPRNLAASLARHGGTLLHISTDSVFDGERPVPEPYGEDDAV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE--ISVVC 176 PL+ Y ++K+A E V ++Y+I+RTAWVY + G NFL +MLRLA + I VV Sbjct: 121 GPLSYYSQTKVASETVVKQELSHYIIVRTAWVYGLHGPNFLKTMLRLALSNPKPRIKVVN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG+ T + ++A + +I + +GI+H TA+ G +W + A+Y R Sbjct: 181 DQFGSLTWSYRVAEQLARII-------EAGGQGIYHATAE-GYATWFEVADYFL----RR 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++ T +Y T A RP S L+ +L + + WK + + Sbjct: 229 MGIEIQINPCTTAEYQTPAKRPKNSILENRRLKDQGLNLMRPWKTDLDEFIAR 281 >gi|33865181|ref|NP_896740.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8102] gi|33638865|emb|CAE07162.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 8102] Length = 302 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 100/301 (33%), Positives = 148/301 (49%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVI 54 MK L+ G GQ+ Q+L +E++ R +DL PD + Sbjct: 1 MKVLLTGAAGQLGQALIGRMPDGIELVASSRSGGNGLVALDLADATACRQVVEEHRPDWV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVDKAE EPE+A ++N A A+A + G + +STD+VF+G +P Sbjct: 61 LNAGAYTAVDKAEAEPELAHAVNGGAPRAFAEAIQAHGGRMLQLSTDFVFNGQQGSPYRV 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +PL +YG SK +GE+ V + V+LRT+WV G NF L+MLRL +E+ + Sbjct: 121 DQSRDPLGVYGASKASGEKAVEELLGTSGQGVVLRTSWVMGPVGKNFALTMLRLHREKEQ 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G P+S L +A A + + + L + H DGG SW D + + Sbjct: 181 LGVVADQVGCPSSTLNLATACWAVITS--SRDEVELPPVLHWC-DGGAASWYDVSVAVGE 237 Query: 232 ESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + G + V I T YPT A RP YS LDC + W+ ++++L Sbjct: 238 LAMDLGLLQRAATVNPISTADYPTPATRPGYSLLDCQASRQVLQLEAQPWRAALKDVLQA 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|16264651|ref|NP_437443.1| putative dTDP-4-dehydrorhamnose reductase protein [Sinorhizobium meliloti 1021] gi|15140789|emb|CAC49303.1| putative dTDP-4-dehydrorhamnose reductase protein WgaJ (formerly ExpA10) [Sinorhizobium meliloti 1021] Length = 300 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 123/292 (42%), Positives = 175/292 (59%), Gaps = 3/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ V G GQ+A L + +E++ +GRP +DL +P PD++++ A Sbjct: 1 MRIAVTGCEGQLALGLVERSHRRSGMEVVTIGRPHLDLTEPATILPAIERCRPDLVVSAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE EPE AF++NA GAGA+A+AA + +P ++ISTDYVFDG E Sbjct: 61 AYTAVDQAESEPEAAFAVNAFGAGAVAEAAACLEVPIVHISTDYVFDGSKPRSYAEGDTP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YG SKLAGE VA T ++ILRT WVYS FG NF+ ++LRLA+ER +I+VV DQ Sbjct: 121 APLSVYGASKLAGESAVAEATPRHLILRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G P+SA+ +A AI+ I+ L ++ + G++H+ G VS ADFA + S GG Sbjct: 181 RGNPSSAIDLADAILDISARLTKSRQDAAFGLYHLAG-SGVVSRADFARHALAASRAAGG 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P++ V I T +PT A RPA S L +K T + W+ V + + Sbjct: 240 PWAHVRDIATGGFPTPASRPANSSLSSAKFNATFGQAMPAWQGSVERTVRRL 291 >gi|182680401|ref|YP_001834547.1| dTDP-4-dehydrorhamnose reductase [Beijerinckia indica subsp. indica ATCC 9039] gi|182636284|gb|ACB97058.1| dTDP-4-dehydrorhamnose reductase [Beijerinckia indica subsp. indica ATCC 9039] Length = 299 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 3/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G GQ+ Q + + + + + V R + D+ + S P +I+N AA+T Sbjct: 9 ILVFGAGGQLGQEVMAQGSARGLPVQGVKRAEADIGDAAAVTAAIESRKPRLILNAAAFT 68 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE EPE A N G +AKAA +P ++ISTDYVFDG + E P PL Sbjct: 69 AVDKAESEPEAAHLANVVGIEILAKAAARFDVPLVHISTDYVFDGSKQGAYVESDPIKPL 128 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG +K GE ++ + ++ILRTAWV+ +G+NFL +MLRLA ER + VV DQ G Sbjct: 129 GVYGATKAEGEARLRAAAPKHIILRTAWVFGPYGANFLKTMLRLAGERDLLRVVADQRGC 188 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+ IA A+ I ++ L G +H +W FA+ I G Sbjct: 189 PTATADIAAAVFAI-DQALDAPAADLWGTYHFAG-ADATTWHAFADAIVEAQTRWSGRRP 246 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV I T+ YPT A RP S L+ A T R + E + L ++ Sbjct: 247 KVEAITTQDYPTPAKRPQNSELNSGLFAATFGYRAAPLAERIAETLASL 295 >gi|317132492|ref|YP_004091806.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3] gi|315470471|gb|ADU27075.1| dTDP-4-dehydrorhamnose reductase [Ethanoligenens harbinense YUAN-3] Length = 283 Score = 283 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 105/286 (36%), Positives = 150/286 (52%), Gaps = 13/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+I +GQ+ S + ++ D+D+ P L+ PD ++N AA Sbjct: 1 MRMLIIAADGQLGTDAVSYFSKKYDVSAFKTADMDVTDPIRVNGAILAVKPDAVLNCAAM 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E + E A+ +NA GAG +A AA +G ++ISTDYVF G P E +P Sbjct: 61 TNVDGCESQAEQAYRVNAYGAGLVALAAARVGAHLVHISTDYVFAGDGSRPYVETDSPDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKL+GE V + N ILRTAW+Y G+NF+ +ML+LA E+ E+ VV DQ G Sbjct: 121 QNVYGASKLSGERHVQALCPNSAILRTAWLYGPHGNNFVKTMLKLA-EKGEVGVVTDQVG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTS ++ R I + GIFH T + G VSW FA IF + G Sbjct: 180 NPTSTFELIRMIDAVVAC-------KSTGIFHATCE-GVVSWNGFAREIFRLA----GVE 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + ++++ AHRPAYS L K+A R + W++ +R Sbjct: 228 VNVKDVTSEEFVRPAHRPAYSVLSKDKIAAVTGYRPADWQDALREY 273 >gi|210615557|ref|ZP_03290655.1| hypothetical protein CLONEX_02873 [Clostridium nexile DSM 1787] gi|210150224|gb|EEA81233.1| hypothetical protein CLONEX_02873 [Clostridium nexile DSM 1787] Length = 289 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 97/290 (33%), Positives = 150/290 (51%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK V G +GQ+ +++ + E++ ++D+ + + +F PDVIIN A Sbjct: 5 MKIWVSGASGQVGTAITDVADPLAFELLNTDVEELDITEIDEVLNFAELNRPDVIINCAG 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T V E PE+A+ +NA GA ++ AA IG + ISTD VFDG S P EF TN Sbjct: 65 ITDVALCEKNPELAYKVNALGARNLSIAARKIGAKLVQISTDDVFDGQSSEPYCEFDDTN 124 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P +YG+SK AGE V +T + I+R+ W+Y G NF+ ++L K + V DQF Sbjct: 125 PKTVYGRSKRAGENYVKEFTEKHFIIRSNWIYGK-GKNFVSNLLERVKTEHVLPVASDQF 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PTSA +AR ++++ DT+ G +H+TA G S +FA+ I + Sbjct: 184 GSPTSANDLARLLLELM-------DTNEYGTYHITAK-GTCSRYEFAKEILRLTDH---- 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + TK+ + RPAY+ LD L + + W+E ++ L Sbjct: 232 DVTIQPVPTKESEFSSVRPAYAVLDNFILRILNMQEMPEWRESLKIFLKE 281 >gi|163789265|ref|ZP_02183707.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1] gi|159875480|gb|EDP69542.1| dTDP-4-dehydrorhamnose reductase [Flavobacteriales bacterium ALC-1] Length = 293 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 161/293 (54%), Gaps = 15/293 (5%) Query: 3 CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 LV + Q+A+ + S+ V I D+D+ K S F S D IN AA Sbjct: 4 VLVTAKDSQLARCIESISKNHPKVNFIFKSSSDLDITKKTHVQSVFNSIKDLDYCINCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSP 117 YTAVDKAE++ A+S+N G+ +A+A + ++ISTD+VF+G P E S Sbjct: 64 YTAVDKAEEDTINAYSVNVLGSKNLAEACYEYEVTLVHISTDFVFNGTVPVPQPYSEDSN 123 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T PL++YG++KL GE+ +A + I RT+W++S FG+NFL +ML+LA ER EI+VV D Sbjct: 124 TGPLSVYGETKLKGEKVIAETIKKHFIFRTSWMFSEFGNNFLKTMLKLATERNEINVVSD 183 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A +A+ I+ + GIFH + G +W +FA+ IF S + Sbjct: 184 QIGSPTYARDLAKVILCFIEK-----EYKNYGIFHYC-NRGSTTWYNFAKEIFSLSQK-- 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ ++ TK YPT A RP YS LD SK+ T + W++ + + + Sbjct: 236 --GVKLNKVKTKDYPTLAARPKYSVLDTSKIEQTLGVTPLKWEDSLAIAISRL 286 >gi|163851817|ref|YP_001639860.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] gi|163663422|gb|ABY30789.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens PA1] Length = 296 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 102/291 (35%), Positives = 145/291 (49%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L + + V + R +D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQAFPWPEGVRVHAPDRQSLDITDEAAVAAALDARAYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAEIEVAAAWRLNALAPAILAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLAGERDRLTVVEDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + +++ G FH D G +W DFA I SA RGG Sbjct: 181 GCPTSAA-DLAGALAAIALRLAGDESAPTGTFHCVND-GATTWCDFARAIVAGSARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YPT A RP S L L + + + +W+ + +IL + Sbjct: 239 SVPIEGIPSSAYPTPARRPVNSRLSTQSLTDAYGLAPRSWEPALDDILDRL 289 >gi|197119709|ref|YP_002140136.1| dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] gi|197089069|gb|ACH40340.1| dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] Length = 278 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 105/285 (36%), Positives = 147/285 (51%), Gaps = 14/285 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G+ G + Q L + + + DI L+ P ++IN AAYT Sbjct: 2 ILVVGSKGMLGQELMQVFGDAARGVDLDDIDI--TDLASVQRVLLTLKPRIVINAAAYTD 59 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD + E E A +N EG +A IG + +STDY+FDG +P E +PL+ Sbjct: 60 VDGCQAEVEKAMQVNGEGVAYLALTTKEIGAKLVQVSTDYIFDGKKGSPYVEDDLASPLS 119 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 IYG+SKLAGE A + +++I+RT W+Y G NF+ +ML+LA ER E+SVV DQ G+P Sbjct: 120 IYGESKLAGEMN-AWFNPDHLIVRTQWLYGHGGKNFVETMLKLAGERSELSVVDDQTGSP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +A AI + D G +H A+ G VSW FA+ IF + G K Sbjct: 179 TWAYDLALAIKALL-------DKGCGGTYH-AANAGFVSWNGFAKEIFRLA---GIADIK 227 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T + A RP YS LDCSKLA + W++ + L Sbjct: 228 VNPMSTAELNRPAPRPLYSTLDCSKLAQDTGFALQPWQQALERYL 272 >gi|154247473|ref|YP_001418431.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] gi|154161558|gb|ABS68774.1| dTDP-4-dehydrorhamnose reductase [Xanthobacter autotrophicus Py2] Length = 299 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 4/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ + ++++ + ++ + +G +D+ P A + PD +IN AAY Sbjct: 3 RILLFGAGGQLGREVTALAAERGLDTVGLGHDALDIADPVAVARAIEAARPDALINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E ++A INA G IA+ P I++STDYVFDG E P P Sbjct: 63 TAVDKAETEQKMAARINAFAPGLIAERCARYRTPLIHVSTDYVFDGTKAGAYVEADPIAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++K AGE V + + +VI+RT+WVY G+NFL +MLRLA ER + VV DQ G Sbjct: 123 LGVYGRTKAAGEAAVRAASERHVIVRTSWVYGAHGNNFLKTMLRLAAERDLLKVVSDQRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+ +A A +A + G +H G +W FA I +A G Sbjct: 183 CPTATRDLAEA--VLAAAQAAARGDARWGTYHFAG-TGATTWHGFASAIVAAAAVHTGKT 239 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T +YPT A RP S L T +R + W++ V ++ + Sbjct: 240 PEVAPITTAEYPTPAQRPKNSELASDLFERTFGVRAAPWEQRVGEVVDAL 289 >gi|288549269|gb|ADC52829.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces platensis] Length = 338 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 8/291 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+S+ V+ + +GR +DL S P V++N AA+ Sbjct: 42 RWLVTGASGMLGRELTSLLVRRGAAVTALGRGALDLTNDAAVRSALARHRPAVVVNCAAW 101 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE EP A ++N +G +A+A ++G + +STDYVF G + P E PT P Sbjct: 102 TAVDAAESEPSRAMAVNGDGPRHLAQACRALGAVLLQLSTDYVFAGSAGRPYREDDPTGP 161 Query: 121 LNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V ++RTAW+Y G NF+ +M+RL E+ + VV DQ Sbjct: 162 RTVYGCTKRAGERAVLDILPEAGYVVRTAWLYGAGGPNFVATMIRLEAEQDTVPVVDDQH 221 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A A + T+ GI+H T GG +W A F G Sbjct: 222 GQPTWTADLAD--RLAALGSAALAGTAPAGIYHATNTGG-TTWYTLARETFRL---LGAD 275 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + A RP YS LD + + W + + Sbjct: 276 PGRVRPTTSLALARPATRPGYSVLDQPRWREAGLEPLRNWHTALAEAFPTL 326 >gi|89093584|ref|ZP_01166532.1| dTDP-4-keto-L-rhamnose reductase [Oceanospirillum sp. MED92] gi|89082274|gb|EAR61498.1| dTDP-4-keto-L-rhamnose reductase [Oceanospirillum sp. MED92] Length = 304 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G NGQ+ +L + +I + + +D+ + PD +IN AA Sbjct: 11 KILITGANGQVGTALQLQGENESFFNVIPLDKSKLDITDSEQINELLAQHLPDYVINCAA 70 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + +D+AE + E +++N EG +A A + IP ++STDYVFDG + E Sbjct: 71 FDHIDEAEHKSETCYAVNTEGVEKLALACGDLNIPMFHLSTDYVFDGHYASGYTEDDEVA 130 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +Y SK GEE++ ++ILR +W++S G+NF+L L A++ + + V D+ Sbjct: 131 PLGVYADSKWQGEERLRQLLPKHIILRVSWLFSEQGNNFVLRTLEAARQSKVLEAVSDRR 190 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGG 238 G PTSA +AR I+ + + +D G +H + DF + I + Sbjct: 191 GCPTSAADVARVILAMLKQIHNGADA--WGTYHYCG-AEITNRYDFCKEILIAAGNYENF 247 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ I +K Y T+A RP S L C KL + IR W++ ++ ++ Sbjct: 248 EVEKMVPISSKDYVTEAQRPNTSILICKKLLSVFGIRQKPWRQELQWLM 296 >gi|134094386|ref|YP_001099461.1| TDP-rhamnose synthetase, NAD(P)-binding [Herminiimonas arsenicoxydans] Length = 271 Score = 282 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 98/273 (35%), Positives = 141/273 (51%), Gaps = 13/273 (4%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 EI+ + R +DL S P +IINPAAYTAVD AE P++A INA+ G Sbjct: 2 GEIVALDRQQMDLANLDQVRDVIRSVKPQLIINPAAYTAVDLAESAPDLAMRINADAPGV 61 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +A A +G I+ STDYVFDG E +P ++YG+SKLAGE+ + + ++ Sbjct: 62 MAAEAKKLGAAMIHYSTDYVFDGDKAESYTEEDVPHPQSVYGRSKLAGEQAIQAAGIPHL 121 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 ILRT+W+Y + G NFLL++ RLA+ER E+ +V DQFG PT + +A L Sbjct: 122 ILRTSWIYGLRGKNFLLTVQRLAQERDELRIVADQFGAPTWSRTLAEVTAHAICQLQGGG 181 Query: 204 ---------DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 ++ G++H+TA G SW F + I S+ G KV I T+ YP Sbjct: 182 TQANVDHAAWSAHSGLYHVTAQ-GRTSWHGFTQAIIAHSS--GLKQPKVTPIATQDYPLP 238 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A RP S L + R+ W+ ++ + Sbjct: 239 AKRPQNSVLSSQRFMQAF-CRLPEWEAALKLCV 270 >gi|260428713|ref|ZP_05782691.1| dTDP-4-dehydrorhamnose reductase [Citreicella sp. SE45] gi|260420307|gb|EEX13559.1| dTDP-4-dehydrorhamnose reductase [Citreicella sp. SE45] Length = 285 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 122/290 (42%), Positives = 159/290 (54%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV+G +GQ+A+ L+++ + +GR +DL P+ A+ +IN AA+ Sbjct: 1 MTVLVLGRSGQVARELAALPG----MRCMGREAMDLRDPQACAAALRDIPCTAVINAAAW 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A +NAE G +A+AA +G+P + ISTDYVFD P P P Sbjct: 57 TAVDKAESEEAEAHLLNAEAPGVMARAAAELGLPFVQISTDYVFDRAGTEPHLPDDPVAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++KLAGEE VA + ILRT+WV+S G+NF +MLRL +ER +++V DQ G Sbjct: 117 PNAYGRTKLAGEEAVAGAGGAHAILRTSWVFSAHGANFPRTMLRLGRERDRLTIVADQVG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IARA IA L + S GI+H + VSWADFA IF R G Sbjct: 177 GPTFAGDIARACAAIAAQLQTRPEDS--GIYHYSG-APDVSWADFAREIF----ARAGIS 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDCS + WK G+ +L I Sbjct: 230 CAVEDIPTSAYPTPAVRPLNSRLDCSATKRIFGLDRPDWKAGLATMLQQI 279 >gi|253583524|ref|ZP_04860722.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC 27725] gi|251834096|gb|EES62659.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Fusobacterium varium ATCC 27725] Length = 475 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 14/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G +GQ+ Q + + ++ ++D+ + F + +IN AAY Sbjct: 193 NVLLTGGDGQLGQDFQKLFDKLGIKYTATDYRELDVTDKEKVKEFVDNNDFTTVINCAAY 252 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+AE+EPE F++NA +++ I + STD+VFDG P E + NP Sbjct: 253 NNVDRAEEEPEKCFALNAYVPKYLSEICKEKNIVFVTYSTDFVFDGQKEIPYTEENIPNP 312 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IY K+KL GE+ Y ++VI RT+WV+ + +NF ++ +K + +S+V DQ Sbjct: 313 LSIYSKAKLEGEKYSLEYGKSFVI-RTSWVFGMGNNNFCKQVINWSKGKDRLSIVDDQVS 371 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A ++ T G++H++ D G S + A+YI + G Sbjct: 372 SPTYSKDLAEYSWELIQ-------TDRYGLYHLSND-GEASKFEQAQYILKKIGWNGI-- 421 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R TK +P A R YS LD SKL N +I WK G+ L + Sbjct: 422 --LERAKTKDFPLPARRAEYSKLDSSKLEKVINKKIPHWKSGIDKFLEEM 469 >gi|46202159|ref|ZP_00208408.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 292 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 146/288 (50%), Gaps = 8/288 (2%) Query: 7 GNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G++ ++L + + + +GR +D+ P S ++IN AAYTAVD+ Sbjct: 3 GAQGRLGRALGCAELPEGTALTGLGRQQLDITDPDAVERALDRDSWSLVINAAAYTAVDR 62 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE E + AF++N G +A+A + G+P I+ISTDYVFDG + P E P PL++YG Sbjct: 63 AESERDAAFAVNGTGPAHLARACATRGVPLIHISTDYVFDGTAPDPYPEDHPMAPLSVYG 122 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 SK AGEE V S ++ I+R +W+Y G +F+ ++ + R + VV DQ G T A Sbjct: 123 ASKAAGEEAVRSLNPDHAIMRVSWLYGGQGGDFVRAIAGAIRAGRHLRVVSDQTGALTHA 182 Query: 186 LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR 245 +A+A + + ++ ++ RG +H A G +W + A I E + G + Sbjct: 183 DCVAQAALALGAKMV--NEGLERGTYHFAA-SGAANWHEIAAVILAEMVQLGYKKVPLEA 239 Query: 246 IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 I +Y A RPA S LDC K + W+ +R IL Sbjct: 240 ITATEYGLPAVRPANSRLDCGKFDRLVGLPRPHWQTMLVPQLRRILSE 287 >gi|253699536|ref|YP_003020725.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251774386|gb|ACT16967.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 278 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 105/288 (36%), Positives = 148/288 (51%), Gaps = 20/288 (6%) Query: 3 CLVIGNNGQIAQSLSSM---CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 LV+G+ G + Q L + + V+I + D+ L+ P ++IN AA Sbjct: 2 ILVVGSKGMLGQELMQVYGDAARGVDIDDIDITDL-----SSVQRVLLTLKPRIVINAAA 56 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD + E E A +N EG +A IG + +STDY+FDG P E + Sbjct: 57 YTDVDGCQTEVEKAMQVNGEGVAFLALTTKEIGAKLVQVSTDYIFDGKKGAPYVEDDLAS 116 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+IYG+SKLAGE A + +++I+RT W+Y G NF+ +ML+LA ER E+ VV DQ Sbjct: 117 PLSIYGESKLAGEMN-AWFNPDHLIVRTQWLYGHGGKNFVETMLKLAGERSELCVVDDQI 175 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A AI + D G +H A+ G VSW FA+ IF + G Sbjct: 176 GSPTWACDLALAIKALL-------DKGCGGTYH-AANAGFVSWNGFAQEIFRLA---GLA 224 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + T + A RP YS LDCSKLA + W++ + L Sbjct: 225 DIKVNPMSTAELNRPAPRPLYSTLDCSKLAQDTGFTLQPWQKALERYL 272 >gi|119775374|ref|YP_928114.1| dTDP-4-dehydrorhamnose reductase [Shewanella amazonensis SB2B] gi|119767874|gb|ABM00445.1| dTDP-4-dehydrorhamnose reductase [Shewanella amazonensis SB2B] Length = 301 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 164/290 (56%), Gaps = 5/290 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G++GQ+ ++L + +++ GR ++D L+P+ + L P ++IN AAY Sbjct: 1 MRVLLLGSSGQVGRALLAFKPAGYKLLVPGRSEVDYLQPESITDYVLFHKPQLVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E + IN+ +AKAA + +++STDYVFDGL P +E P Sbjct: 61 TAVDKAEAETALCTRINSGACEHLAKAAAAADAVLLHLSTDYVFDGLLDRPYNEEDSPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L++YG SK GE+ + + ++I+RT+W++ +NF+ +MLRLA R E+ VV DQ G Sbjct: 121 LSVYGHSKWLGEQTIVANCAKHLIVRTSWIFDADSNNFVNTMLRLAASRSELRVVADQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A ++ARAI Q+A +E + G++H + VSW +FA I E+ Sbjct: 181 GPTPASELARAIWQLARQSVERNGP--WGVYHFSGQ-PFVSWYEFARSILTEAYRLCVIH 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + I ++ + A RPA S LD SK+ + + + W+ + NIL Sbjct: 238 QLPTITSISASEFGSPAQRPANSRLDGSKIKALYGVAAADWQSELVNILK 287 >gi|256380334|ref|YP_003103994.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] gi|255924637|gb|ACU40148.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] Length = 296 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 144/295 (48%), Gaps = 16/295 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD--------VI 54 LV G GQ+ Q L + + ++D+ A F+ V+ Sbjct: 6 LLVPGGRGQLGQDL---LATGGRVRALSSAELDITDADAVADRVSEFAAWARAEGLAPVV 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AAYTAVD AE + + A ++NA G +A A +P +++STDYVF G + P + Sbjct: 63 VNAAAYTAVDDAETDEDRALAVNALGPELLALACREHDVPLLHVSTDYVFPGDATAPYEP 122 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 T P + YG++KLAGE + + + ++RTAWVY G NF+ +M RLA +R +SV Sbjct: 123 DDVTGPRSAYGRTKLAGERRALAAWDRTWVVRTAWVYGAGGPNFVKTMARLAGQRESLSV 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G+PT + +A ++++A + + R + H T GG +W A +F E Sbjct: 183 VDDQRGSPTWSADLAAGLVELAAATTGPAAPAQR-VLHATG-GGETTWFGLARAVFEE-- 238 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V T+ +P A RPAYS L + + W+E + + + Sbjct: 239 -LGLDPERVRPCGTEDFPRPAPRPAYSVLSPKAWESAGLTPLRPWREALTAAVRD 292 >gi|119503618|ref|ZP_01625701.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2080] gi|119460680|gb|EAW41772.1| dTDP-4-dehydrorhamnose reductase [marine gamma proteobacterium HTCC2080] Length = 292 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 114/291 (39%), Positives = 154/291 (52%), Gaps = 9/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G GQ+ Q L C + + I + R +D+ P A P +IN AA+T Sbjct: 3 KALVCGAGGQLGQELVLTCPEQCQAIPMTRSMLDIADPTQVAKALDDAEPTWVINAAAFT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE EPE+A +NA+G +A I +++STD+VFDG P ++ NPL Sbjct: 63 AVDAAESEPELAHYVNAKGPEVLALQCRERNIRFLHVSTDFVFDGTQGHPYAPYTEPNPL 122 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SKL GE V + + VILRT WVYS G NF+ +MLRL ER ++SVV DQ GT Sbjct: 123 GVYGRSKLDGESAVVAAGGSPVILRTGWVYSRHGGNFVKTMLRLIAEREQLSVVEDQIGT 182 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-- 239 PT A +A A +A + GI+H + D G SW DFA I + E G Sbjct: 183 PTWARGLALACWGLADH------GDASGIYHWS-DAGACSWYDFAAAIRDIALELGLLRQ 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I QYPT A RPAYS LD + N W +R +L+++ Sbjct: 236 AATLLPIPASQYPTPAQRPAYSVLDKTLTRNLLGHSGHHWTSQLRAMLIDL 286 >gi|254788157|ref|YP_003075586.1| dTDP-4-dehydrorhamnose reductase [Teredinibacter turnerae T7901] gi|237687051|gb|ACR14315.1| dTDP-4-dehydrorhamnose reductase [Teredinibacter turnerae T7901] Length = 288 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 109/294 (37%), Positives = 159/294 (54%), Gaps = 13/294 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+ L+ C VE++ +GR +D+ P IIN AAY Sbjct: 1 MKVLVCG-RGQLGAELARTCPDSVELVHLGRDALDIADAGQVDRVVAELKPAAIINAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + + A + N G +A+AA + G ++ISTD+VFDG + TP +P P Sbjct: 60 TAVDKAETDADAARAGNEVGPANLARAAANNGSYLLHISTDFVFDGTANTPYLPDAPVAP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG++KLAGE +A ++ ILRTAWV+S G+NF+ ++LRLA +R +++++ DQ Sbjct: 120 LGVYGQTKLAGEVAIAESGLSHWAILRTAWVFSALGNNFVKTILRLAADRPKLTIIADQI 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A+ ++ ++ GI H T D G SW DFA I A RG Sbjct: 180 GSPTCAKHLAKTCWLAVNHQLQ-------GIHHCTCD-GVASWYDFAMAIQELGAARGLL 231 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS-TWKEGVRNILVNI 290 + I T+ YPT A RP YS L + L S W++ + +L + Sbjct: 232 SGTCDIAPIRTEDYPTPARRPHYSVLSNASLREQLPEAPSVYWRKALAEMLDEL 285 >gi|198282743|ref|YP_002219064.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665614|ref|YP_002424938.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247264|gb|ACH82857.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517827|gb|ACK78413.1| dTDP-4-dehydrorhamnose reductase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 289 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 118/291 (40%), Positives = 153/291 (52%), Gaps = 11/291 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L++G GQ+ L VE+ +GRPD+D+L SF PD IIN AAYT Sbjct: 3 RVLLLGAQGQVGWELQRSRPASVELRALGRPDLDILDAAQVLGMAESFRPDAIINAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE E A+++N +GA A AA + G I++STD+VFDG TP +P PL Sbjct: 63 AVDRAESESARAYAVNRDGAAHCALAAQACGARLIHLSTDFVFDGAQATPYPPEAPLAPL 122 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG SK GE +V + + +ILRTAWVYS GSNF+ +MLRL ER + VV DQ G Sbjct: 123 GVYGASKADGERQVQAILGDTALILRTAWVYSAHGSNFVKTMLRLMAERDVLRVVGDQIG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 TPT A +ARAI + GI H T D G SW DFA I E+ G Sbjct: 183 TPTWAAGLARAIWSTLDH------PGFTGIQHWT-DAGVASWYDFAVAIQEEAVAAGRLH 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I T YPT A RPA + LD + W+ +R +L Sbjct: 236 RAIPIEMIPTSAYPTPARRPACAILDKTASYTALG-AAPHWRTALRRMLTE 285 >gi|13650069|gb|AAK37552.1|AF349575_3 putative dTDP-4-rhamnose reductase [Azospirillum brasilense] gi|46241699|gb|AAS83084.1| putative dTDP-4-rhamnose reductase [Azospirillum brasilense] Length = 309 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 116/290 (40%), Positives = 157/290 (54%), Gaps = 4/290 (1%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G NGQ+ L + + + R D+ K ++ + P +++N +AYT Sbjct: 11 VLVFGANGQVGFELRRAAWAPGLAPLGLDRASGDVTDAKAVSAAIAAHRPALVVNASAYT 70 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTNP 120 AVDKAE E + AF++N +G +A+A + G+P I+ISTDYVFDG TP E P P Sbjct: 71 AVDKAESERDTAFAVNRDGPANLARACAAAGVPLIHISTDYVFDGTSKTTPWSESDPVAP 130 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +Y SKLAGEE V ++VILRTAWV+ G NF+ +MLRLA+ER E+ VV DQ G Sbjct: 131 QGVYAASKLAGEEAVRDAQPDHVILRTAWVFGAHGHNFVKTMLRLARERDELRVVADQHG 190 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA AI IA + + G FH +W FAE I +A R G Sbjct: 191 CPTPAAAIAAAIATIAQARLT-GEGWTPGTFHY-GGAPATTWHGFAERIVDRAAARIGRR 248 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +PT A RPA S LD ++L + I + W G+ +L +I Sbjct: 249 PAVTAITTADFPTPARRPANSVLDTARLGQAYGIPPADWMAGLDRVLDDI 298 >gi|267041|sp|P29781|RMLD_STRGR RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|49013|emb|CAA44443.1| dTDP-dihydrostreptose synthase [Streptomyces griseus] Length = 304 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 8/286 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G + + L+ + + + +GR +D+ S P V++N AA+ Sbjct: 8 RWLVTGASGMLGRELTPLLDRRGAAVTALGRGHLDITDGAAVRSAVAEHRPAVVVNCAAW 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP +A ++N EG +A+A ++G + +STDYVF G P E PT P Sbjct: 68 TAVDEAESEPALAMAVNGEGPRHLAQACRAVGAVLLQLSTDYVFPGSGGRPYREDHPTGP 127 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +YG +K AGE V + I+RTAW+Y G NF+ M+RL + + VV DQ Sbjct: 128 RTVYGCTKRAGERAVLEVLPDTGYIVRTAWLYGAGGPNFVAKMIRLEADEDTVLVVDDQH 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A + + + + + I+H T GG +W A F G Sbjct: 188 GQPTWTADLADRLAALGAAALAGTAPAG--IYHATNTGG-TTWNALAPETFRL---LGAD 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++V + A RP YS LD S+ + W+ + Sbjct: 242 PARVRPTTSLALARPAVRPRYSVLDQSRWKAAGLEPLRHWRAALTE 287 >gi|149178945|ref|ZP_01857522.1| dTDP-4-dehydrorhamnose reductase [Planctomyces maris DSM 8797] gi|148842219|gb|EDL56605.1| dTDP-4-dehydrorhamnose reductase [Planctomyces maris DSM 8797] Length = 292 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 98/293 (33%), Positives = 149/293 (50%), Gaps = 19/293 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + VIG+ GQ+ L + + I + P+ A PD+IIN AAY Sbjct: 3 RITVIGSRGQLGHDLMESLTAAGHQTTGLTHQQISIEDPECIAGALGQSPPDLIINTAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD--GLSRTPIDEFSPT 118 VD AE EPEIA++INA G +A+ I ++IS+D+V+ +TP E Sbjct: 63 NKVDLAEKEPEIAYAINALGPRHLAQYCSEKSISLMHISSDFVYGLDTSRQTPFQEHEAP 122 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREISV 174 P++ YG SKLAGE V + + ++RT +Y + G NF+ +MLRL K+R E+S+ Sbjct: 123 GPVSAYGLSKLAGEYFVRALCPQHYVVRTCGLYGVAGKTGNGNFVETMLRLGKDRDELSI 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + DQ TPT+ +A A+ ++ +T+ G++H T G +W +FA IF + Sbjct: 183 INDQHCTPTATRDLASALTRLI-------ETNQFGLYHATCQ-GQTTWYEFACTIFELA- 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + I T+QY A RP +S LDCS+L I WK +++ L Sbjct: 234 ---GISVNTHPITTEQYNAPADRPRFSVLDCSRLTAAIGDAIPDWKSSLKHYL 283 >gi|297526884|ref|YP_003668908.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM 12710] gi|297255800|gb|ADI32009.1| dTDP-4-dehydrorhamnose reductase [Staphylothermus hellenicus DSM 12710] Length = 284 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 90/294 (30%), Positives = 142/294 (48%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG +GQ+ + + + I + D+D+ PDVI+N AAY Sbjct: 1 MRVAVIGASGQLGSDIVFVL--GDDAIPLTHQDVDVTDASSL-DVIRDLKPDVIVNTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+ E P F++N+ GA +AK A+ + IYISTD+VFDG P +E NP Sbjct: 58 HKVDECELNPLKTFNVNSVGALNVAKIANEVDAINIYISTDFVFDGKKGRPYNEDDQPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y I+R A ++ + G+ NF+ + A+ I VV Sbjct: 118 VNVYGLSKYIGEIVTRNYSRKYYIIRLASLFGVKGARGKGGNFIDKITEKARRGEPIRVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +AR + ++ E G++HM + G SW + A+ +F E Sbjct: 178 DDMIMSPTYTKDVARMLKKLLELRPE------YGVYHMVNE-GYCSWYELAKTVF----E 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + I T+ A RP +S L+ +L R+ W+E ++ LV Sbjct: 227 IIGWDADIKPIKTRDLNLVARRPLFSALENRRLHK-LGFRMRPWREALKEYLVE 279 >gi|114326769|ref|YP_743926.1| dTDP-4-dehydrorhamnose reductase [Granulibacter bethesdensis CGDNIH1] gi|114314943|gb|ABI61003.1| dTDP-4-dehydrorhamnose reductase [Granulibacter bethesdensis CGDNIH1] Length = 301 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 163/289 (56%), Gaps = 2/289 (0%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G +GQ+A +L + V + RVGRP+ D +P + F SP +++N AAYT Sbjct: 7 ILVTGGSGQVALALEEAAKARGVSVRRVGRPEFDFDRPDSIETVFREVSPSLVVNAAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + A N +G +A+ GIP I+ISTDYVFDG P E PTNP Sbjct: 67 AVDAAESDVAAAERANRDGPARLAELCAVAGIPLIHISTDYVFDGSKGAPYVETDPTNPT 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++KLAGE+ V + ++LRTAWV S G NF+ +ML A++ + VV DQ G Sbjct: 127 GVYGRTKLAGEDAVLATCRQAIVLRTAWVVSHTGKNFVKTMLNAARKTDTLRVVADQQGN 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSA +A AI+ IA L + + + G H A G +W AE +F ++A+ G P Sbjct: 187 PTSAADLAEAILDIAKKLEKGWNDTYFGPTH-AAGTGATTWHGLAEAVFEQAAKHGAPRP 245 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V+ I T +PT A RPA S LDC++L +R+ W+ + I+ + Sbjct: 246 AVHPIKTSDWPTPARRPADSRLDCTRLETVFGVRMPDWQGSIALIVDQL 294 >gi|126178138|ref|YP_001046103.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1] gi|125860932|gb|ABN56121.1| dTDP-4-dehydrorhamnose reductase [Methanoculleus marisnigri JR1] Length = 270 Score = 281 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 142/286 (49%), Gaps = 29/286 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G G + L ++ V + ++D+ + + SPD+++N AAYT Sbjct: 7 KTVIFGAYGMLGHDLQTVYPGAV----LRGHELDITDERAVGACIRDLSPDLVVNAAAYT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD ED ++AF++N E IA A G ++ STDYVFDG R E P+ Sbjct: 63 DVDGCEDNRDLAFAVNGEALAYIASACSDAGATLVHYSTDYVFDGSKRE-YIESDTPAPI 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG SKL GE+ + T +Y I+RT+W++ G NF+ +ML L+K+ ++ VV DQ G Sbjct: 122 NVYGASKLLGEQNIVKNTGDYRIIRTSWLFGRHGKNFVETMLHLSKQMDQVRVVNDQVGK 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT + +AR +I GI+H+T D G SW DFA I Sbjct: 182 PTYTVDLARKTPEIVGL--------EPGIYHVTND-GVCSWYDFARAIIE---------- 222 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + ++P KA RPAYS L +K A + W + + + L Sbjct: 223 NVVPCSSAEFPRKAKRPAYSVLANTKTA-----PLRHWSDALADYL 263 >gi|298346201|ref|YP_003718888.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 43063] gi|298236262|gb|ADI67394.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 43063] Length = 287 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 151/296 (51%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSRGEDVRTYDRPEIDLTVQSSVKEHVVEA--DVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 S V + T +P A RPA+S L + + I W+E + IL + Sbjct: 229 KDPSMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEERWEVAAKEILAD 284 >gi|163793775|ref|ZP_02187749.1| dTDP-4-dehydrorhamnose reductase [alpha proteobacterium BAL199] gi|159180886|gb|EDP65403.1| dTDP-4-dehydrorhamnose reductase [alpha proteobacterium BAL199] Length = 302 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 116/292 (39%), Positives = 157/292 (53%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G GQ+ +L + D I GR +DL P+ A+ + +PD ++NPAA Sbjct: 1 MQVLVTGITGQVGGALVARSTPDGMNWIPAGRDRVDLSAPRSIAAAIDALAPDAVVNPAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + E AF +N +G A+A A + GIP + +STDYVFDG P P Sbjct: 61 YTAVDVAETDQETAFRVNRDGPAALAAACAARGIPLLQVSTDYVFDGTGSRPYRPSDPVA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL YG SK GEE V S ++VILRTAWVY+ G NF+ +MLR+ ER E+ VV DQ Sbjct: 121 PLGAYGTSKQEGEEAVRSTLADHVILRTAWVYAATGKNFVNTMLRVGAERDELRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT A IA ++ + + ++RG H T G +W A+ +F + G Sbjct: 181 GTPTPAEDIATVLLTVLKAW--QAGVAVRGTHHFTC-SGETTWHGLADAVFRRAERHWGR 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH----NIRISTWKEGVRNIL 287 V+ I T YPT A RPAYS LD S L + +W+ + +L Sbjct: 238 RPIVHPIGTADYPTPAARPAYSVLDNSTLDAALAGFSAVPRQSWEAALDAVL 289 >gi|54026611|ref|YP_120853.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152] gi|54018119|dbj|BAD59489.1| putative dTDP-4-dehydrorhamnose reductase [Nocardia farcinica IFM 10152] Length = 285 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 96/289 (33%), Positives = 135/289 (46%), Gaps = 17/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAY 60 + +V G GQ+ + L + R +D+ + P DV+IN AAY Sbjct: 12 RLVVTGAAGQVGRHLMRLAPH---ARGYDRAHLDITDADAVRAVV---HPGDVVINCAAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP+ AF++N G +A A G I++STDYVF G P + PT P Sbjct: 66 TAVDKAETEPDAAFAVNGTGPAVLASACARAGARLIHLSTDYVFGGTHTDPYEPTDPTAP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG+SKLAGE V ++RTAWVY+ +F+ +M R A ER + VV DQ G Sbjct: 126 ASAYGRSKLAGERAVLDLAPAAHVVRTAWVYTGDRGDFVATMRRFAAERPTVDVVDDQIG 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A L + + + H T + G SW + A +F AE G Sbjct: 186 SPTYAADLAAG------LLELAATPAAPPLLHAT-NAGTASWFELARAVF---AEIGADP 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + +P A RPAYS L + W+ + L N Sbjct: 236 ERVRPCASSAFPRPAPRPAYSVLSNRAWVAAGLTPLRPWRAALHEALGN 284 >gi|323144613|ref|ZP_08079201.1| dTDP-4-dehydrorhamnose reductase [Succinatimonas hippei YIT 12066] gi|322415622|gb|EFY06368.1| dTDP-4-dehydrorhamnose reductase [Succinatimonas hippei YIT 12066] Length = 298 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 5/291 (1%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G GQ+ + L + + E+I +D+ + S D+IIN AAY Sbjct: 3 RVLLTGAYGQVGKELEVCLLNSEDEVISCDHRALDISQEDRVLSAVTESGADIIINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+KAEDE A+ +NA G +AKAA IP I+ISTDYVF + P E Sbjct: 63 TNVEKAEDERVKAYEVNAYGPKYLAKAAKLADIPLIHISTDYVFSSENGRPHREDDTVEA 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKL GEE + + + Y+I+R++W++ +G+NF+ +MLRLA + +SVV DQ G Sbjct: 123 QCVYGKSKLEGEENIIACCSKYLIVRSSWIFGRYGNNFVKTMLRLAGKYDAVSVVSDQKG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A A+ + H + D GI+H + ++W +FA +F + G Sbjct: 183 NPTPARALAEALCIMTHEAL-KPDFKDYGIYHFAGN-PAITWDEFARSVFKYAKLAGFIQ 240 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V I K YP+KA RP S LD +K+ I + W + + + Sbjct: 241 KDMVVKSILAKDYPSKAVRPYDSRLDTNKINEVFKIDLPDWHDYLPETVGE 291 >gi|171316143|ref|ZP_02905368.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171098747|gb|EDT43541.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 294 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 103/290 (35%), Positives = 154/290 (53%), Gaps = 6/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + I + R +D+ P+ + ++IN AA+ Sbjct: 1 MTIVVTGALGQVGRELL-LRAGMRPTIGLSRAQLDIADPRAVRDALATHRATLVINAAAW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N G +A A + GIP +++STDYVFDG + DE + P Sbjct: 60 TAVDRAETEPDAAWRANCAGPATLADACAAAGIPLLHLSTDYVFDGRAPGAYDEAAGVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG +K AGEE V + ++ILR AWV+ G NF+ +MLR+ +ER E++VV DQ+ Sbjct: 120 LGVYGHTKWAGEEAVRQRLPDAHLILRIAWVFGAHGGNFVRTMLRVGRERDELAVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A A++ IA ++T G +H+ +W FAE IF ++ G Sbjct: 180 GGPTHAGAVADALLAIADRHCTGAET-RWGTYHLCG-TPVTTWHGFAETIFRQARRAGLI 237 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V I T YP A RPA S LDC+++ I W + ++L Sbjct: 238 DRIPLVRPIRTAAYPLPAPRPANSALDCTRIREHFGIAAPCWIPALADVL 287 >gi|50954290|ref|YP_061578.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950772|gb|AAT88473.1| dTDP-4-dehydrorhamnose reductase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 295 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 14/285 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ Q L E+ +GR D+D+ + DV+IN +AYT Sbjct: 3 RYLIAGAHGQLGQDLQRALA-GREVTALGRADLDVTDRDTVLAAVAGH--DVVINASAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + A++INA G +A AA G + +STDYVFDG P E +P +P+ Sbjct: 60 KVDDAETHEDDAYAINATGTENLAVAAAQHGATFVTVSTDYVFDGSGAEPYAEDAPRDPI 119 Query: 122 NIYGKSKLAGEE-KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG++K AGEE +A++ I+RTAW+Y G+NF +M+RLA+ +SVV DQ G Sbjct: 120 NAYGRTKAAGEELALATHPGGTYIVRTAWLYGAGGANFAKTMVRLAESHETVSVVADQIG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I+ + + + G++H T + G SW FA+ +F + G Sbjct: 180 QPTWTGDLAERIVTLLDS------DAPPGVYHGT-NSGQASWFAFAKAVFSAA---GLDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + + A RP+YS L + W+E + + Sbjct: 230 DRVLPTDSAAFTRPAPRPSYSVLGHEGWRRAGLKPMRPWEEALAD 274 >gi|229819705|ref|YP_002881231.1| dTDP-4-dehydrorhamnose reductase [Beutenbergia cavernae DSM 12333] gi|229565618|gb|ACQ79469.1| dTDP-4-dehydrorhamnose reductase [Beutenbergia cavernae DSM 12333] Length = 284 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 93/281 (33%), Positives = 136/281 (48%), Gaps = 11/281 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G G +A + + + E++ R D+D+ + D +IN AA+ Sbjct: 1 MRILVTGAGGMLAHDVVARLDAEHEVLPRARRDLDVTDADAVRRAVAPGT-DAVINCAAW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE AF +NA +A+A ++G + +STDYVFDG + P E +P P Sbjct: 60 TAVDDAESHEGAAFDLNALAPAHLAQACTAVGARLVQVSTDYVFDGAAALPYGEDAPLRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K AGE V + +++++RTAW+Y G+ F +M RLA ER I VV DQ G Sbjct: 120 VSAYGRTKAAGEWAVRAAGADHLVVRTAWLYGAHGACFPRTMARLAAERERIDVVDDQLG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A + ++ G +H TA G VSW F I A G Sbjct: 180 QPTWTADVADVVARLLERGAPG------GTYHATA-SGEVSWYGFTREIV---ASLGRDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + V + + A RPAYS L L I W+E Sbjct: 230 AMVRPTTSAAFSRPAPRPAYSVLGHEALVRAGLAPIGDWRE 270 >gi|225568040|ref|ZP_03777065.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM 15053] gi|225163136|gb|EEG75755.1| hypothetical protein CLOHYLEM_04113 [Clostridium hylemonae DSM 15053] Length = 286 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 94/289 (32%), Positives = 148/289 (51%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++G GQ+ +++ + D E+ + ++D+ + SF PDVIIN AA Sbjct: 3 KVWIVGAGGQLGTAINDVLDPLDAEVFNTDKEELDITHTDEVISFGEINRPDVIINCAAV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T E++PE+A+ +NA GA ++ A G + +STD VFDGLS TP EF TNP Sbjct: 63 TDTALCEEQPELAYRVNALGARNLSIVARKTGAKIVQLSTDDVFDGLSTTPYSEFDDTNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SK AGE V +T+ + I+R+ WVY G NF+ S+L A ++++SV DQFG Sbjct: 123 RTVYGRSKRAGENYVKEFTHKHFIVRSNWVYGK-GDNFVNSVLEKAGSQKQLSVAADQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA + R I+ + T+ G +H T G S +FAE I + Sbjct: 182 SPTSARDLGRLILYLI-------GTNEYGTYHATCK-GTCSRYEFAEEILKLADR----N 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + ++ + RPAY+ LD L + W+ + + Sbjct: 230 IELKPVPARESELASVRPAYAVLDNFILRIIDVYEMPDWRASLEEYMEE 278 >gi|254167999|ref|ZP_04874847.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|289595932|ref|YP_003482628.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|197623042|gb|EDY35609.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|289533719|gb|ADD08066.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] Length = 283 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 20/295 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +IG NGQ+ L + + + + D+D+ PDVIIN AAY Sbjct: 1 MKVAIIGANGQLGSDLVEVFGE--IAVPLTHRDLDVTNYDSL-KILKKIDPDVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF++NA GA +AK A+ + +YISTDYVFDG P E NP Sbjct: 58 VRVDDAEKEPKKAFNVNAIGALYVAKIANKLDAINVYISTDYVFDGRKGAPYTEEDMPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y I+R A +Y G NF+ ++ A+ EI VV Sbjct: 118 INVYGASKYMGEIFTRNYSKKYYIVRVASLYGKKGARGKGGNFVNWIIEKARRGEEIKVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +A + ++ E GI+HM + G SW +FA+ I Sbjct: 178 DDIIMSPTYTRDVAETLKKLLERKPE------YGIYHMVNE-GYCSWYEFAKEIVNIL-- 228 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + I + + A RP +S L+ K+ + +R+S WK ++ + + Sbjct: 229 --GFEIPIKPIGSNELIRLARRPKFSALENKKIHDV-ALRLSPWKSALKRYVSEL 280 >gi|167570966|ref|ZP_02363840.1| dTDP-4-dehydrorhamnose reductase [Burkholderia oklahomensis C6786] Length = 250 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 102/249 (40%), Positives = 133/249 (53%), Gaps = 7/249 (2%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 P +I+NPAAYTAVDKAE + +A +NAE A+ A G I+ STDY Sbjct: 2 REVLRELEPSIIVNPAAYTAVDKAESDEAMARQLNAEAPRVFAEEAARSGATLIHYSTDY 61 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VFDG +P E NP N+YG++KLAGE+ +A+ ++ILRT+WVY G NFLL+M Sbjct: 62 VFDGAKASPYTEDDAVNPQNVYGRTKLAGEQAIAASGCAHLILRTSWVYGQRGKNFLLTM 121 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR----GIFHMTADGG 218 LRL ER E+ VV DQ G PT A IA I + GI+H+T G Sbjct: 122 LRLRDERSELRVVADQIGAPTWANTIATMTAHIVAQGLAAGSVQWWAERSGIYHLTC-AG 180 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 SW FA+ IF ++ P ++ I T YPT A RPA S L KL ++ S Sbjct: 181 ATSWHGFAQDIFARASSESSP--RLLPISTSDYPTPAKRPANSRLSNEKLETVFGLKPSR 238 Query: 279 WKEGVRNIL 287 W E ++ L Sbjct: 239 WDEALQLCL 247 >gi|107029155|ref|YP_626250.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116687026|ref|YP_840273.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105898319|gb|ABF81277.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116652741|gb|ABK13380.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 294 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 152/291 (52%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDIDDADAVRHALDEQRATLVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A + GIP +++STDYVFDG P E + P Sbjct: 60 TAVDRAEAEPDAAWRANRDGPAVLADACAARGIPLLHLSTDYVFDGRLPGPYAEAAAVGP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG+SKLAGEE V + ++ILR AWV+ GSNF+ +MLRLA+ER + VV DQ+ Sbjct: 120 LGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGSNFVRTMLRLAREREVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A++ IA + G +H+ +W FAE IF E+ G Sbjct: 180 GGPTHAGAIADALLTIAARY-RAGEALRWGTYHLCG-TPVTTWHGFAETIFTEARRTGLI 237 Query: 240 Y--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I T YP A RPA S LDCS L + +W G+ ++ Sbjct: 238 DRVPLVRPIRTDAYPLPAPRPANSALDCSLLREHFGVESPSWIAGLTDVFA 288 >gi|146298096|ref|YP_001192687.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101] gi|146152514|gb|ABQ03368.1| dTDP-4-dehydrorhamnose reductase [Flavobacterium johnsoniae UW101] Length = 281 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 12/287 (4%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQI L S + E I R I L + P+VI N A Sbjct: 3 KILVTGANGQIGSELFVLSTSYPEFEWIFADRIKITLDNLELLKIQLNEIKPNVIFNCGA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE E E+AF IN IAK + I++STDYVFDG S + ++E + TN Sbjct: 63 YTDVDKAETEKELAFIINYLAVELIAKYTYENNVKLIHVSTDYVFDGSSSSALNEEAETN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG+SKL GE N +I+RT+WVYS FG NF+ +M RL ER EI+VV DQ Sbjct: 123 PINVYGESKLKGELACLKENPNSIIIRTSWVYSKFGKNFVKTMQRLMLERDEINVVNDQI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT A +A+ +I I G+++ + + G +SW +FA I E GG Sbjct: 183 GSPTYAADLAQVLINIVRFC-----GWFPGVYNYSNE-GEISWYEFALSI----KEFGGY 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 KV I + Y T A RP +S LD K+ T+N+ I +K+ ++N+ Sbjct: 233 SCKVEGIASSLYHTPAKRPRFSLLDKKKIKETYNLEIPCYKKSLKNM 279 >gi|72383077|ref|YP_292432.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL2A] gi|72002927|gb|AAZ58729.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. NATL2A] Length = 298 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 155/301 (51%), Gaps = 16/301 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-----DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G NGQ+ Q + S + +EII+ R ++DL+ S PD +I Sbjct: 1 MKILLTGANGQLGQQIVSESLSFSTQMSLEIIQCTREELDLVDYDACKSIVEYHKPDWVI 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AYT V+KAE EP IA+ +NA+ A +A G I IS+DYVF+G +P Sbjct: 61 NAGAYTNVEKAETEPNIAYQVNAQAPAAFVEALTKYGGQIIQISSDYVFNGDQSSPYKTS 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER----RE 171 PL +YGKSK GEE V +Y + +++R+ WVY G+NFLL M+ L E R Sbjct: 121 DLIQPLCVYGKSKARGEEFVLAY-DKGIVIRSGWVYGPVGNNFLLKMIHLHSEESDKPRT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PTS +A I + +++ +S I H + D G SW DFA I Sbjct: 180 LKVVSDQIGSPTSTKNLA---IAVLRSIMVSSKIYTPKILHFS-DAGVASWYDFAIAISE 235 Query: 232 ESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + E ++ I +K Y T A RP YS LDC N ++ W++ + +++ Sbjct: 236 IAIELDLFQNPLRIEPIQSKNYKTLAKRPNYSVLDCFATMNALKMKPLHWRDSLSHVMKG 295 Query: 290 I 290 + Sbjct: 296 L 296 >gi|315657295|ref|ZP_07910177.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491767|gb|EFU81376.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 287 Score = 280 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 151/296 (51%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVEA--DVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTCDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 S V + T +P A RPA+S L + + I W+E + IL + Sbjct: 229 KDPSMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEERWEVAAKEILAD 284 >gi|315654784|ref|ZP_07907689.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 51333] gi|315490745|gb|EFU80365.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii ATCC 51333] Length = 287 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 103/296 (34%), Positives = 151/296 (51%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVEA--DVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 + V + T +P A RPA+S L + + I W+E + IL + Sbjct: 229 KDPAMVVPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEERWEVAAKEILAD 284 >gi|149909225|ref|ZP_01897882.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36] gi|149807749|gb|EDM67695.1| dTDP-4-dehydrorhamnose reductase [Moritella sp. PE36] Length = 293 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 100/289 (34%), Positives = 159/289 (55%), Gaps = 6/289 (2%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQI QS+ Q+ +++ +D+ A F +F P+V+IN AAY Sbjct: 3 RLLVTGQKGQIGQSIKDRIDHQEWDVLLTDIETLDITNAAQVARVFKAFKPNVVINAAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE+E A S+NA G +A ++G I+ ST+Y+F+G S E P Sbjct: 63 TEVDKAENEAGAAESVNAYGPYLLALQCHNVGALLIHFSTEYIFNGHSDCRYVETDTPAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG++KL GE+ + +Y ++Y+I+RT+WV+S + NF+ +ML L +E I +V DQFG Sbjct: 123 LNVYGRTKLQGEQYIKTYLSHYIIIRTSWVFSEYARNFVTTMLSLRREAEPIRIVNDQFG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A + IA + ++ G ++ D VSW DFA IF E + G Sbjct: 183 CPTYAGDVANLALDIAKERMAETNRYQLGEYNFCGDS-EVSWFDFACAIFDELDKYQPGE 241 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + +++Y + A RP L+C K++ R S W+ +R+++ Sbjct: 242 QGRHLVGVTSEEYASIAVRPRNGILNCHKISPIF--RPSDWRRKLRHVI 288 >gi|257468057|ref|ZP_05632153.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] gi|317062343|ref|ZP_07926828.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] gi|313688019|gb|EFS24854.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium ulcerans ATCC 49185] Length = 475 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 14/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G +GQ+ Q + + ++ ++D+ + F + +IIN AAY Sbjct: 193 NVLLTGADGQLGQDFQKLFDKLSIKYTATDYRELDVTDKEKVKEFVDNHDFTMIINCAAY 252 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VDKAE+E E +++N+ + + I + STD+VFDG P E TNP Sbjct: 253 NNVDKAEEELEKCYALNSHVPKYLVEICKEKNIAFVTYSTDFVFDGEKEIPYTEEDITNP 312 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+IY K+KL GE+ Y ++VI RT+WV+ + +NF ++ +K + ++ +V DQ Sbjct: 313 LSIYSKAKLEGEKYSLGYDKSFVI-RTSWVFGMGNNNFCKQVINWSKGKDKLRIVDDQIS 371 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A ++ T G++H++ D G S + A+YI + G Sbjct: 372 SPTYSKDLAEYSWELIQ-------TGKYGLYHLSND-GEASKFEQAQYILKKIGWTGV-- 421 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + R T+++P A R YS LD SK+ + +I WK G+ L + Sbjct: 422 --LERGKTEEFPLSAKRAQYSKLDSSKIEKIIDRKIPHWKTGIDRFLEEM 469 >gi|304390039|ref|ZP_07371993.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326521|gb|EFL93765.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 287 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 104/296 (35%), Positives = 151/296 (51%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G NG + Q L M E +R RP+IDL + DV++N AA Sbjct: 1 MRWIVVGANGMLGQDLVEMLQSQGEDVRTYDRPEIDLTVQSSVKEHVVEA--DVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSP 117 +TAVDKAE++ AF INA +A IG ++ISTDYVFD + TP +E++ Sbjct: 59 FTAVDKAEEQERAAFDINATAVQYLAAQCREIGARLVHISTDYVFDEPADRETPCEEYAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + S + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PKPAGAYGRTKLAGEWALRSLSEDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A I ++ S + GI+H TA G +W F + I G Sbjct: 179 QYGQPTWTRDLADLIWRLI------SAKAPSGIYHGTAQ-GKTNWHGFTQAIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 S V + T +P A RPA+S L + + I W+E + IL + Sbjct: 229 KDPSMVAPVTTADFPRPAPRPAFSVLAHKTIRDLGLEPIGPWEERWEVAAKEILAD 284 >gi|282861855|ref|ZP_06270919.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. ACTE] gi|282563671|gb|EFB69209.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. ACTE] Length = 294 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 8/285 (2%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G G +A+ L+ + ++ + GR +D+ + F P V++N AA+T Sbjct: 5 WLVTGAAGMLARDVLARLAGEEATPVAAGRDVVDITDAASVRAAFEEHRPAVVVNCAAWT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + E A +N GA +A+A G + +STDYV G + P E + T P Sbjct: 65 AVDDAESQEEAALRVNGTGARILAEACREHGAVLLQVSTDYVLAGDAEQPYAEDAATGPR 124 Query: 122 NIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++KL GE V ++RTAW+Y G NF+ +M++L + + VV DQ G Sbjct: 125 SAYGRTKLEGERAVLDVLPEAGYVVRTAWLYGAGGGNFVRTMIKLEDVKDTLDVVDDQRG 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A ++++ + T+ G++H T+ GG +W IF G Sbjct: 185 QPTWTVDLADRLVRLGQGALAG--TAPAGVYHGTS-GGETTWFGLTREIFRL---LGADP 238 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V ++ + A RPA+S L + I W++ + Sbjct: 239 DRVRPTTSEVFVRPAPRPAFSVLGHDRWKAAGIEPIRDWRDALGE 283 >gi|158056583|emb|CAP11383.1| 4-ketoreductase [Streptomyces olivaceus] Length = 293 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 10/288 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G G + + L+ + + E + R ++D+ + DV++N AA+ Sbjct: 3 RWLITGAAGMLGRDLAEVLAESGAEYTALTRKELDITDTAAVRAAVAGH--DVVVNAAAW 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE E A IN EG A+A A G I +STDYVF G + P +PT P Sbjct: 61 TDVDGAETEEAAATRINGEGPRALAAACAETGAVLIQVSTDYVFPGDATEPYRHDAPTAP 120 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG+SKLAGE V ++RTAW+Y G NF+ +ML LA++R + VV DQ Sbjct: 121 VNAYGRSKLAGELAVTELLPERGYVVRTAWLYGAHGRNFVSTMLGLAEQRETVDVVDDQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +AR + + + + G++H TA +W D A F + G Sbjct: 181 GQPTWTRALARQLRDLGEAAVAGKAPA--GVYHGTA-AETATWFDLARAAFELT---GLD 234 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V ++++ A RP+YS L + A W+E + L Sbjct: 235 PERVRPTTSEKFVRPARRPSYSVLAHERWAEAGVAAQPHWREQLTEAL 282 >gi|289549230|ref|YP_003474218.1| dTDP-4-dehydrorhamnose reductase [Thermocrinis albus DSM 14484] gi|289182847|gb|ADC90091.1| dTDP-4-dehydrorhamnose reductase [Thermocrinis albus DSM 14484] Length = 286 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 13/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L++G GQ+ ++ + + +++ +GR + D+ + P V+IN A Sbjct: 1 MRVLLLGKRGQLGRAFVKKLSSEGYQLVALGREECDVTSMSSVKRWLDEVKPHVVINCTA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE++ AF++NA + + + G+ I+ STDYVFDG P E + Sbjct: 61 YNYVDKAEEDYATAFAVNAFAVKVLGELCVAKGVKLIHYSTDYVFDGTKGAPYVEDDKPS 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YGKSK GE + +++I R +WVY NFL +L K + + + D+ Sbjct: 121 PLSLYGKSKYTGELLLQELEGDFLIFRVSWVYGEGKQNFLYKLLNWVKTQDILKISADEV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTS I ++ LRG++H+T + G S ++A+ + Sbjct: 181 SVPTSTKTIVDVTLKALKK-------DLRGLYHLT-NSGYASRYEYAKKVL----RLLKI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V + + A RP++S + ++++ I I W+E + Sbjct: 229 EKTVLPVPMSVFSLPAKRPSFSAMSNARISKELQIDIPHWEEELEMF 275 >gi|145588442|ref|YP_001155039.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046848|gb|ABP33475.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 319 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 104/315 (33%), Positives = 154/315 (48%), Gaps = 27/315 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMC-----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK LV G +GQ+ ++ + + + +GR + DL P+ A+ F P++II Sbjct: 1 MKVLVFGKDGQLGKAFQQVFSALTPPHPIHVEFLGRAECDLCNPEAIATTLDKFKPNIII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVDKAE E ++A++INA +A A G ++ STDYVFDG E Sbjct: 61 NSSAYTAVDKAETEVDLAYAINARAPELMAAYAAEHGATFLHYSTDYVFDGEKYGFYLED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSIFGSNFLLSMLRLAKERR 170 +PL +YGKSK AGEE +A N Y ILRT+WVY G+ F+ ++LRLAKER Sbjct: 121 DVRSPLGVYGKSKAAGEEGIARIFANSKLGQYAILRTSWVYGDGGN-FIRTILRLAKERE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ V+ DQ+G PTSA +A+ + + N + GI+H G +W A Sbjct: 180 ELKVIADQYGVPTSAQWLAQVSLGLTLNQDGSIKHFPSGIYH-AVPAGETTWHGLATLAV 238 Query: 231 WESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI-----------R 275 + + G + I +YP A RPA S + KL + Sbjct: 239 SAAIKAGVALKVQPGLIKPIPATEYPLPAPRPANSRMSTDKLQSALGGSRSYNEAQQSPE 298 Query: 276 ISTWKEGVRNILVNI 290 W++ V+ + + Sbjct: 299 FPQWEQMVQEYVSRL 313 >gi|332703267|ref|ZP_08423355.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio africanus str. Walvis Bay] gi|332553416|gb|EGJ50460.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio africanus str. Walvis Bay] Length = 293 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 98/289 (33%), Positives = 150/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V+G G + +SL ++ +GR D+D+ + A + N A Sbjct: 5 KAVVLGGRTGLLGRSLVRALEAAGWAVVPLGRADVDIFDSQALAGVLDREECSALFNTVA 64 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAEDEP+ A+ +N + + + A GI ++ STD+VFDG + TP +PTN Sbjct: 65 YTQVDKAEDEPQEAYRLNEKLPQLLGRLARPRGIRLVHYSTDFVFDGRADTPYAPDAPTN 124 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL++YGKSKLAGE + + + +I+RT+W++ +NF+ +L LA+ R + VV DQ Sbjct: 125 PLSVYGKSKLAGERALLNQDVPSLLIIRTSWLFGPGKNNFVQKILELARSRDTLGVVHDQ 184 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+P+ +AR + + G+ H A+ G SW + A E+ G Sbjct: 185 VGSPSYTPDLARNSLALMQ-------AGGSGV-HHLANAGQASWCELA----SEAVNAAG 232 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I T QYPTKA RPAYS LD S+ I+ W + +R + Sbjct: 233 LQCRVTPITTDQYPTKAKRPAYSVLDISRFTGITGIKPRPWVQCLREYV 281 >gi|258591062|emb|CBE67357.1| Spore coat polysaccharide biosynthesis protein spsK [NC10 bacterium 'Dutch sediment'] Length = 288 Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 97/294 (32%), Positives = 146/294 (49%), Gaps = 18/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L+IG NGQ+ L D +++ + + +L +SP +I+N AAY Sbjct: 1 MTTLLIGANGQLGSELRQAFS-DGDLVPLTHAEFELADRTQVWDMLRKYSPHLILNTAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+ ED PE AF++NA +A A IG ++ STDYVFDG RTP E P Sbjct: 60 HRVDECEDFPERAFAVNAIAVRNLAIATKEIGATLVHFSTDYVFDGRMRTPYREADQPRP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSMLRLAKERREISVV 175 L++Y SK AGE V + Y ++RT +Y + G F+ +MLRLA R+I VV Sbjct: 120 LSVYATSKRAGEYFVQAILERYYLIRTCGLYGVAGRCNKTGNFVETMLRLAAAGRKIDVV 179 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ TPTSA ++AH + +T G++H+T + G SW FA +F S Sbjct: 180 GDQIVTPTSAK-------ELAHKVRRLVETDAYGLYHITNN-GECSWYQFAGAVFELSGV 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + ++ + + +A RPAYS L+ + L + + W++ + L Sbjct: 232 QAH----LHETTSAAFGARAVRPAYSVLENANLRSLGLDDLRHWRDALSEYLTE 281 >gi|296114301|ref|ZP_06832955.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter hansenii ATCC 23769] gi|295979062|gb|EFG85786.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter hansenii ATCC 23769] Length = 298 Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 108/289 (37%), Positives = 153/289 (52%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G NGQ+A SL+ + +I+VGRPD D +P+ + + P ++N AA+TA Sbjct: 10 VLVTGGNGQLAVSLADV--GGARVIKVGRPDFDFDRPETIDAVVARYDPAFVVNAAAWTA 67 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E A N G +A A G I+ISTDYVF G TP E PT+P Sbjct: 68 VDAAETEVAAASRANQTGPAILAAACAVQGCGLIHISTDYVFAGDKGTPYVESDPTSPRT 127 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K AGE V + +ILRTAWVYS G NF+ +M+ + ++ VV DQFG P Sbjct: 128 VYGATKAAGETAVLAACPQAIILRTAWVYSAHGKNFVKTMISAGAKNPKLRVVGDQFGNP 187 Query: 183 TSALQIARAIIQIAHNLIE-NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 TSA +A+AI I + E + G++H TA G +W A ++A G Sbjct: 188 TSADDLAQAIFAIIARIEETGWQAAYPGVYHATAQ-GETTWYGLAVATLEQAARHGQALP 246 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I T+ +PT A RP S LDC+KL + + W++ V + + Sbjct: 247 EIEAIRTQDWPTPAERPQDSRLDCTKLKQVFGVSLPNWRQSVARTVDRV 295 >gi|147678912|ref|YP_001213127.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] gi|146275009|dbj|BAF60758.1| dTDP-4-dehydrorhamnose reductase [Pelotomaculum thermopropionicum SI] Length = 296 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 14/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+IG++G I Q+L + + EII G +D+ P + P ++IN AA+ Sbjct: 8 RVLIIGSSGTIGQALIPELKKLNAEIITPGHNILDITNPYQTKDYIHQVRPSLVINAAAF 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+K+E E A+ INA G +AK P ++ STD+VF G + P E NP Sbjct: 68 TDVEKSEKEQLKAWKINAYGPLIVAKICAEQQTPLVHFSTDFVFSGEKKQPYTEEDRFNP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERREISVVCD 177 LN+YG +K AG+ V+ T+ Y I+RT+ ++ + +F+ ++ + + +V D Sbjct: 128 LNVYGTTKAAGDLFVSHVTDQYYIIRTSRLFGMGKSRRKDFVQRIIEAITSQPYLKIVDD 187 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q T + +A+ +I + + GI+++ + G SW FA I +G Sbjct: 188 QVACYTYSNDLAKWLIALFKT------NARYGIYNLC-NKGECSWYKFAREILKL---KG 237 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + K+ I T ++P+ A RP YS L K I+ TW+E ++ + Sbjct: 238 LSFYKIKPIKTAEWPSLAKRPLYSSLSTKKFELVTGIKPRTWQEALKEYI 287 >gi|114563926|ref|YP_751440.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] gi|114335219|gb|ABI72601.1| dTDP-4-dehydrorhamnose reductase [Shewanella frigidimarina NCIMB 400] Length = 300 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 23/304 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A++L + + E+I++ +D+ +P+ + PD+IIN AAY Sbjct: 1 MKILTFGQTGQLARALKRVQPKTAELIQLSHQQVDITQPQLIDEALAFYRPDIIINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V+KA+ P A INA +AKAA + GI I +STDYVFDG S TP + Sbjct: 61 TDVEKAQINPVAAMQINALAVEYMAKAASNYGIKLIQLSTDYVFDGRSSTPYSVTQKPST 120 Query: 121 LNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKER---------- 169 +N YG+SKL EE + SY + + I+RT+W+Y G+NF+ +ML+L + Sbjct: 121 INAYGQSKLLAEETLLSYQSALFCIVRTSWLYHHSGNNFVTTMLKLMTQSHNQQTIGSSA 180 Query: 170 -REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 I VV DQ G+PT AR + ++ S I+H + + G +W +FA+ Sbjct: 181 DNPIKVVNDQTGSPTMVDDFARFLWKLC------SQKQWSAIYHWS-NAGKCTWYEFAQE 233 Query: 229 IFWESAERGGPYSKV--YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 I + G + I ++QY + +RPA+S LD ++L++T I W++ + Sbjct: 234 IKTQGIALGLLPQSIYLQPITSEQYASIVNRPAFSVLD-TRLSHTLAI-PKPWQQQLAQC 291 Query: 287 LVNI 290 L + Sbjct: 292 LNEL 295 >gi|194098063|ref|YP_002001111.1| putative reductase [Neisseria gonorrhoeae NCCP11945] gi|193933353|gb|ACF29177.1| putative reductase [Neisseria gonorrhoeae NCCP11945] gi|317163796|gb|ADV07337.1| putative reductase [Neisseria gonorrhoeae TCDC-NG08107] Length = 283 Score = 278 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 107/287 (37%), Positives = 156/287 (54%), Gaps = 8/287 (2%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G+ Q+A L +D E I +D+ + SF PD I+N AAYTAVDK Sbjct: 2 TGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCNMVKSFQPDAIVNTAAYTAVDK 61 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE + AF++NA +A AA I+ISTDYVFDG + P E TNP N+YG Sbjct: 62 AEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDYVFDGKGKIPHQESDFTNPSNVYG 121 Query: 126 KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSA 185 +SK AGE S + +ILRT+W++S +G NF+ +ML LA+ER +S V +Q G PT A Sbjct: 122 QSKTAGELLALSANPDSLILRTSWLFSEYGDNFVRTMLNLARERSPLSAVHNQIGCPTYA 181 Query: 186 LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--PYSKV 243 ++ AII++ +RGI+H G VSW +FA +IF + ++ P ++ Sbjct: 182 GDLSAAIIRLLQQ-----SNPVRGIYHYAG-GKSVSWYEFARHIFQTALQQDASFPVPEL 235 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + A RPAYS LDC K+ N I+ S W++ + ++ + Sbjct: 236 KAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQKALAQVVSKL 282 >gi|1073092|pir||C49906 rfbC homolog - Xanthomonas campestris pv. campestris Length = 302 Score = 278 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 96/302 (31%), Positives = 134/302 (44%), Gaps = 17/302 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDIDLLKPKDFASFFLSFS 50 M LV G NGQ+ L D + R D P+ + Sbjct: 1 MTTLVFGANGQVGAELLRALAADGAVQATTRSGRLPDGSACETADFDAPETLPALLDRIG 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +++N AAYTAVD AE + A NA+ IA + +P ++ STDYVFDG Sbjct: 61 PSLVVNAAAYTAVDCAEQDRVSAMRANAQAPLTIAAWCAARDVPLVHYSTDYVFDGQDTA 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E + T+PL +YG++KLAGE + + ++ I F + ER Sbjct: 121 PYLEDAQTSPLGVYGETKLAGENAIRASGAQHLDPAYGMGVRIARREFPAHHVACRAERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ VV DQ GTP+ I I L+ G +H+TA G SW FAE IF Sbjct: 181 ELRVVADQIGTPS----RRALIADITAQLLRQRTAETSGTWHLTA-AGQTSWHGFAEAIF 235 Query: 231 WESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 E+ G +V I T YPT A RPAYS L KL +I + W+ G++ ++ Sbjct: 236 EEAVSAGLLPRAPRVVPITTADYPTPAKRPAYSRLSIEKLQRDFDIVLPEWRPGLQRVIA 295 Query: 289 NI 290 + Sbjct: 296 EV 297 >gi|85710315|ref|ZP_01041380.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Erythrobacter sp. NAP1] gi|85689025|gb|EAQ29029.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Erythrobacter sp. NAP1] Length = 282 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 146/291 (50%), Gaps = 16/291 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ + L + + ++ V + DL + PD++IN AAY Sbjct: 1 MRVLITGAKGQLGRGLVASAPAEADVEAVDIDECDLTDADAIGDLVTTIEPDIVINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE + E A +IN+ AI A +++STD+VFDG S P Sbjct: 61 TAVDKAESDEETARAINSGAVKAIVDA---HDGKLVHVSTDFVFDGRSSRAYQPDDTRAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K GE+ + +++RTAWVY+ G+NF+ +MLRL +++ ++VV DQ G Sbjct: 118 ISAYGRTKAEGEDHLRESD---ILVRTAWVYTAGGTNFVRTMLRLMRDKPALNVVSDQIG 174 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A I + D G FH + D G SW DFA I E+ G Sbjct: 175 APTWAPGLAATIWGLL-------DKDASGTFHHS-DAGTASWYDFAVAIQEEALALGLLD 226 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I T YPT A RPA+S LD SK + W+ +R +L Sbjct: 227 AAIPITPITTADYPTPAARPAFSLLDSSKTRALLQDGHTHWRVNLRQMLRE 277 >gi|149925746|ref|ZP_01914010.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105] gi|149825863|gb|EDM85071.1| dTDP-4-dehydrorhamnose reductase [Limnobacter sp. MED105] Length = 337 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 158/312 (50%), Gaps = 25/312 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-----EIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 + LV+G GQ+ ++ + I GR DL K + PDV+IN Sbjct: 26 RVLVLGAQGQLGHTIGQHAKPALMETMDACISYGRDKADLSKLDTLINALKDIRPDVVIN 85 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AAYT V+KAE E E+A +INA+ G +A+ G+ ++ STDYVFDG + P E Sbjct: 86 AAAYTNVEKAETETELAHTINAKAVGILAEQCKKQGVALVHYSTDYVFDGKASQPYTETD 145 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 TNPL+ YGKSKL GE+ + N+V+ RT+WVY G+NF +M++LA+ER + VV Sbjct: 146 ATNPLSAYGKSKLEGEKYLKEVGGNWVVFRTSWVYGQRGNNFCRTMIKLAQERDTLKVVD 205 Query: 177 DQFGTPTSALQIARAIIQIAHNLIEN-----------------SDTSLRGIFHMTADGGP 219 DQ G PT A +A + +A + + S+ IFH +A G Sbjct: 206 DQTGAPTPANWLAELGLTVAGVVAMHRYKTMGKLAPTFLPDFPSEIPSGEIFHASA-AGV 264 Query: 220 VSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 +W D+A + ++G + R T A RPAYS LD +KL NT + Sbjct: 265 TTWFDYACLAIENAHKQGIVQRMPNIERASTSSMNFAAQRPAYSVLDNTKLMNTFRVNPP 324 Query: 278 TWKEGVRNILVN 289 W +GVRN ++N Sbjct: 325 EWTKGVRNFVLN 336 >gi|88808163|ref|ZP_01123674.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7805] gi|88788202|gb|EAR19358.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7805] Length = 302 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 101/301 (33%), Positives = 146/301 (48%), Gaps = 14/301 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP------DIDLLKPKDFASFFLSFSPDVI 54 MK L+ G GQ+ Q+L +E++ R +DL PD + Sbjct: 1 MKVLLTGAAGQLGQALIDAAPAGMELLASSRNGGEGLLALDLADATSCRQAVAEHRPDWV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 +N AYTAVDKAE EPE+A ++N A A+A G + +STD+VF+G +P Sbjct: 61 LNAGAYTAVDKAEAEPELAGAVNGAAPRAFAEAIREHGGRLLQLSTDFVFNGQQGSPYRV 120 Query: 115 FSPTNPLNIYGKSKLAGEEKVASY---TNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +PL +YG SK +GEE V + + ++LRT+WV G NF L+MLRL +++ Sbjct: 121 DQSRDPLGVYGASKASGEEAVEALLGASGQGLVLRTSWVIGPVGKNFALTMLRLHRDKEL 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G P+S L +A A Q + +L + H DGG SW D + + Sbjct: 181 LGVVADQVGCPSSTLNLASACWQAIQRHSQG--AALPPVLHWC-DGGAASWYDVSVAVGE 237 Query: 232 ESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G V I T YPT A RP YS LDC ++ W+ ++++L Sbjct: 238 LGMELGLLECAATVNPITTADYPTPAKRPNYSLLDCQGSRQVLQLQAQPWRAALKDVLQA 297 Query: 290 I 290 I Sbjct: 298 I 298 >gi|170734749|ref|YP_001773863.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169820787|gb|ACA95368.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 294 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 105/291 (36%), Positives = 152/291 (52%), Gaps = 6/291 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M +V G GQ+ + L + + ++ + R +D+ ++IN A + Sbjct: 1 MTIVVTGALGQVGRELV-LRAGEQPLVGLSRAALDVADADAVRRALDEHQAALVINAAGW 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE EP+ A+ N +G +A A + GIP +++STDYVFDG +P E + P Sbjct: 60 TAVDRAEAEPDAAWRANRDGPAVLADACAARGIPLLHLSTDYVFDGRLPSPYAETAAVAP 119 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG+SKLAGEE V + ++ILR AWV+ G NF+ +MLRLA+ER + VV DQ+ Sbjct: 120 LGVYGRSKLAGEEAVRERLPDRHLILRVAWVFGAHGGNFVRTMLRLARERDVVGVVADQY 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA A++ IA + G +H+ +W FAE IF E+ G Sbjct: 180 GGPTHAGAIADALLTIAARY-RAGEALRWGTYHLCG-TPVTTWHGFAETIFTEARRSGLI 237 Query: 240 YSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V I T YP A RPA S LDCS L + +W G+ ++ Sbjct: 238 DRVPWVRPIRTDAYPLPAPRPANSALDCSLLREHFGVESPSWIAGLTDVFA 288 >gi|78044837|ref|YP_359825.1| dTDP-4-dehydrorhamnose reductase [Carboxydothermus hydrogenoformans Z-2901] gi|77996952|gb|ABB15851.1| dTDP-4-dehydrorhamnose reductase [Carboxydothermus hydrogenoformans Z-2901] Length = 283 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K ++ G GQ+ ++ + +E + + R ++D+ FL+F P +IN AAY Sbjct: 3 KIVIAGAGGQLGKAFTKKLQSLGIECLPLTRKELDITDLHLLKELFLNFRPQYLINCAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VDKAE+E E A +N I A I+ STDYVF+G P P Sbjct: 63 NEVDKAEEEKEKALLVNGIALRYIGNLAAQYQTTVIHYSTDYVFNGEKEEPYLISDQPKP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG++KL GE+++ ++ ++R +WV+ NF+ +L A + ++ +V DQ Sbjct: 123 INHYGRTKLLGEKEILTHNPKTYVIRVSWVFGDGEQNFIYKLLNWASKNEKLKIVADQVS 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +I + + + T G++ ++ + G S D+A++I +G Sbjct: 183 SPTYTEEIVKITLDLIK-------TEQYGLYQLSGE-GQASRYDWAKFILDYLNWQG--- 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + +PTKA RP YS L L N TW+E L + Sbjct: 232 -ELIPAASHDFPTKAKRPRYSKLSNLPLKNLLGYLPETWQESTEKYLKEL 280 >gi|238560600|gb|ACR46365.1| TDP-4-dehydrorhamnose reductase [Streptomyces peucetius ATCC 27952] Length = 291 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 7/276 (2%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 L + ++ + GR D+D+ P+ + P V++N AA+T VD AE + E A + Sbjct: 7 LERLAADGIDAVGAGRADLDITDPESVRAAMAEHRPAVVVNCAAWTDVDGAETQEEAALA 66 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 +N G +A+A G +++STDYVF G P E +PT P + YG++KLAGE V Sbjct: 67 VNGTGPRVLAEACKEAGAVLLHVSTDYVFAGDGTKPYAEDAPTGPRSAYGRTKLAGEGAV 126 Query: 136 ASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ 194 + ++RTAW+Y G NF+ +M++L + + VV DQ G PT + +A +++ Sbjct: 127 LDLLPDTGHVVRTAWLYGAGGPNFVRTMIKLEAVKDTLDVVDDQRGQPTWTVDLADRLVR 186 Query: 195 IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 + + T G+ H T+ G +W F IF G +V + + Sbjct: 187 LGQGALAG--TVKAGVHHGTS-SGETTWFGFTREIFRL---LGADPERVRPTTSAAFVRP 240 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 A RP+YS L I W+E + ++ Sbjct: 241 APRPSYSVLGHEGWRAMGIEPIRDWREALAEAFPSL 276 >gi|148238440|ref|YP_001223827.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7803] gi|147846979|emb|CAK22530.1| putative dTDP-4-dehydrorhamnose reductase [Synechococcus sp. WH 7803] Length = 295 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 19/299 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G GQ+ Q+L + C +E+I R ++DL P+ ++ P ++N AY Sbjct: 1 MKVLLTGAGGQLGQALIAACPPGIELIATRRAELDLADPQACSAAVHHHRPAWVLNAGAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE EP +A ++NA A+A+A G + +STD+VF+G P P +P Sbjct: 61 TAVDKAESEPALAQAVNAGAPAALAQALAETGGRMLQLSTDFVFNGAQGQPYQPDQPRDP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNY-----VILRTAWVYSIFGSNFLLSMLRL----AKERRE 171 L +YG +K AGE+ VA + ILRT+WVY G NFLL+MLRL A+ + Sbjct: 121 LGVYGTTKAAGEQAVAEQLGAHEGGRAAILRTSWVYGAVGRNFLLTMLRLHRRNAEAGQP 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G PT+ +A A + + G H + D G SW DFA I Sbjct: 181 LRVVADQVGCPTATPGLAAACWALIAQNL-------SGWQHWS-DAGAASWYDFAVAIGE 232 Query: 232 ESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + RG + V I T QYPT A RPAYS L C+ + W++ + ++ Sbjct: 233 LAVARGLIPAAAAVQPITTAQYPTPAQRPAYSLLACAATRAQLGLPARHWRQALAEVIA 291 >gi|332974435|gb|EGK11359.1| dTDP-4-dehydrorhamnose reductase [Kingella kingae ATCC 23330] Length = 289 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ + + + E+I +D+ K A+ +F PDVIIN A Y Sbjct: 1 MRILLTGANGQVGRCIKQQKPEHWEMIAADSNTLDITDAKAVANMVSNFEPDVIINAAGY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ AE + E F++NAEG +A+AA GI I++S+DYVFDG R P E TNP Sbjct: 61 TNLEAAECDKEHVFAVNAEGTRILAEAAARAGIRFIHLSSDYVFDGQKRMPYTENDYTNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISVVCDQ 178 L+ Y KSKLAGE S +I+R++WV+S G N + R+ ++ ++ D+ Sbjct: 121 LSTYAKSKLAGELLALSSNPASIIVRSSWVFSEHGDNRNNFVKRVMEQALAGSVATPSDK 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +AR +I +A T+ RGI+H D V+ +FA+ + Sbjct: 181 IGCPTYAGDLARLMINLA-----QCQTAPRGIYHYCGDK-AVNRLEFAQTVVKMIQAVRP 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I + RP YS L C K+ S W+ +++++ + Sbjct: 235 LETTVVEIPAPE-NEHTPRPPYSVLSCDKIR-ALGYEPSDWQSALKHVVQTL 284 >gi|325295552|ref|YP_004282066.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066000|gb|ADY74007.1| dTDP-4-dehydrorhamnose reductase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 291 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 22/297 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD---------VEIIRVGRPDIDLLKPKDFASFFLSFSP 51 M+ L+ G GQ+ + VE I VGR + D+ F S P Sbjct: 1 MRYLIFGAKGQLGREFVKWLSGGLVESLKGKTVEWIGVGREECDISDLNQVLELFESTKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +V++N AAY VDKAE++ A +N+ G +A A + ++ STDYVFDG Sbjct: 61 NVVVNCAAYNLVDKAEEDYVSAVKVNSVGVRNLAFACNRYRAFLVHYSTDYVFDGKKENA 120 Query: 112 -IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 E NPLN YGKSKL GEE + +N++ILR +WVY NF+ +L+ A+ Sbjct: 121 LYIEDDKPNPLNEYGKSKLIGEEFIKEEIDNFLILRVSWVYGEGRQNFIYKLLKWAENND 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + + D+ PTS I ++ +E G++H+T + G S ++A+ +F Sbjct: 181 YLKISYDEISVPTSTRTIVDVTLKALKEGLE-------GLYHLT-NSGYASRYEWAKKVF 232 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +Y + ++ + A RP +S + K++ NI I +W+E + + L Sbjct: 233 KIKKVNKF----IYPVSSEIFNLPAKRPKFSAMSNEKVSQELNIEIPSWEEELVDWL 285 >gi|15077648|gb|AAK83291.1|AF355468_2 DTDP-4-dehydrorhamnose reductase [Saccharopolyspora spinosa] Length = 305 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 108/293 (36%), Positives = 156/293 (53%), Gaps = 17/293 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFF---------LSFSP 51 LV G GQ+ L+ + + R G ++D+ ++ A P Sbjct: 6 VLVPGGRGQLGSELARILAARTGALVHRPGSGELDVTDAEEVADALGSFAETAKDAELRP 65 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 V+IN AAYTAVD AE +P+ A INAEGA ++AKA S G+P +++STDYVF G P Sbjct: 66 -VVINAAAYTAVDAAESDPDRAARINAEGAASLAKACRSSGLPLVHVSTDYVFPGDGARP 124 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + PT P ++YG++KL GE V ++RTAWVY G NFL +M+RL+ ER Sbjct: 125 YEPTDPTGPRSVYGRTKLEGERAVLESGARAWVVRTAWVYGASGKNFLKTMIRLSGERDT 184 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SVV DQ G+PT A +A ++++A + E + + H T + G V+W +FA IF Sbjct: 185 LSVVDDQIGSPTWAADLASGLLELAERVAERRGPEQK-VLHCT-NSGQVTWYEFARAIF- 241 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 AE G ++V+ T +P AHRPAYS L + TW+E + Sbjct: 242 --AEFGLDENRVHPCTTADFPLPAHRPAYSVLSDVAWREAGLTPMRTWREALA 292 >gi|254459903|ref|ZP_05073319.1| dTDP-4-dehydrorhamnose reductase [Rhodobacterales bacterium HTCC2083] gi|206676492|gb|EDZ40979.1| dTDP-4-dehydrorhamnose reductase [Rhodobacteraceae bacterium HTCC2083] Length = 284 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 126/290 (43%), Positives = 168/290 (57%), Gaps = 11/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+AQ L I +GR D DL P A + D++IN AAY Sbjct: 1 MRVLIFGKTGQVAQELQRFEG----ITALGREDADLNDPAACAEIIANTDADIVINAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + + AF +NA+ A+A+AA +P ++ISTDYVFDG TP E PT P Sbjct: 57 TAVDAAETDTDKAFVVNADAPKAMAEAAAKRAMPFLHISTDYVFDGTGTTPWREDDPTAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L IYG SKLAGE V + ++ ILRT+WV S G+NF+ +MLRL ER +++V DQ G Sbjct: 117 LGIYGSSKLAGEHGVRAVGGSHAILRTSWVVSAHGTNFVRTMLRLGTERDALNIVADQIG 176 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A++ +A LI++ TS G +H A SWADFA IF ++ G Sbjct: 177 GPTCARDIAAALMHMARKLIDDPSTS--GTYHF-ASTPDTSWADFAREIFTQA----GLS 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+K+A NI W+ G+ +IL ++ Sbjct: 230 CDVTDIPSSAYPTPAARPKNSRLDCTKIATVFNINRPDWRIGLADILSDL 279 >gi|242279116|ref|YP_002991245.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio salexigens DSM 2638] gi|242122010|gb|ACS79706.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio salexigens DSM 2638] Length = 294 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 15/291 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +++G G + QSL+ QD+ I + R D D L + + PD I N A Sbjct: 8 KAVILGGKTGLLGQSLTEKLQAQDIITIPLSRSDFDPLNEESLTAMLEREEPDFIFNTVA 67 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AEDE A +N + + I I+ STD+VFDG +P E TN Sbjct: 68 YTMVDLAEDEENKAHLLNTTLPATLGRLCKQFKIKLIHYSTDFVFDGKKDSPYSEEDKTN 127 Query: 120 PLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG++KLAGEE++ + +I+RTAW++ +NF+ +L AKER ++VV DQ Sbjct: 128 PQSVYGETKLAGEERLNELNYDEILIIRTAWLFGPHKTNFVHKILGFAKERESLTVVHDQ 187 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A I++ + +GIF++ + G SW + A E+ + Sbjct: 188 SGSPTYTPDLADYSIELLKH-------EAKGIFNVV-NSGKASWCELA----TEAIDSCA 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + T YPTKA RP YS LD SK W + +R+ + N Sbjct: 236 INCRVDPVPTSAYPTKATRPPYSVLDTSKFTEVTGKTPRPWVQALRDYVYN 286 >gi|311109416|ref|YP_003982269.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans A8] gi|310764105|gb|ADP19554.1| dTDP-4-dehydrorhamnose reductase [Achromobacter xylosoxidans A8] Length = 299 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 108/294 (36%), Positives = 157/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G +GQ+ + L + EI+ +GR DL + S PDVI+N AAY Sbjct: 1 MKILLLGKDGQVGRELCHALLPFGEIVALGRDGADLRDQDALLAVLSSCRPDVIVNAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE++ E A +NA +A+ A + ++ STDYVFDG + P E NP Sbjct: 61 TAVDAAENDRETATRVNALAVATLARHAQAARALLVHFSTDYVFDGAQQRPYSETDGPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG +KLAGE + + + ++ R WVYS G NFL +MLRLA ER+ ++VV DQ G Sbjct: 121 LNVYGSTKLAGERAIQATGCDALVFRIGWVYSRHGKNFLNTMLRLALERQSLNVVSDQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PTSA +A + G +H+ A G +W +A YI +A RG Sbjct: 181 APTSATFVADVTALAIRQHCAGRLPA--GTYHLAA-AGSTNWHAYARYIVAGAAARGASL 237 Query: 240 ---YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +++ I + YP A RP+ S LD +KL++ +R+ +W E V L + Sbjct: 238 MLAPEQIHAIAARDYPGAAQRPSNSTLDTAKLSHALQLRMPSWTEQVDRTLDQL 291 >gi|78049262|ref|YP_365437.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037692|emb|CAJ25437.1| dTDP-4-dehydrorhamnose reductase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 273 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 104/265 (39%), Positives = 138/265 (52%), Gaps = 8/265 (3%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 D P+ P ++N AAYTAVD+AE E + AF NAE IA+ Sbjct: 12 GTTCETADFDAPETLPGLLDRLQPSCVVNAAAYTAVDRAEQERDAAFRANAEAPAVIAQW 71 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 G+P ++ STDYVFDG P T PL +YG+SKLAGE+ V + ++I RT Sbjct: 72 CARAGVPLVHYSTDYVFDGQGTHPYRPDDATAPLGVYGQSKLAGEQAVQAAGGRHLIFRT 131 Query: 148 AWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 AWVY+ G NFL +MLR+ ER + VV DQ GTPT A IA Sbjct: 132 AWVYAAHGHNFLRTMLRVGAERDVLRVVADQIGTPTPAALIADITAHALRQ-----PGEP 186 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 G++H+TA G +W FAE IF ++ RG +V I T YPT A RPAYS LD Sbjct: 187 SGLWHLTA-AGQTTWHGFAEAIFAQARARGLLARAPRVEAISTADYPTPATRPAYSRLDI 245 Query: 266 SKLANTHNIRISTWKEGVRNILVNI 290 L +T +R+ W++G+ +L + Sbjct: 246 HSLQDTFGVRLPDWQDGLSQVLDTL 270 >gi|254419278|ref|ZP_05033002.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas sp. BAL3] gi|196185455|gb|EDX80431.1| dTDP-4-dehydrorhamnose reductase [Brevundimonas sp. BAL3] Length = 300 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 115/289 (39%), Positives = 153/289 (52%), Gaps = 3/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ L + + V + R ++DL + F + +IN A+T Sbjct: 7 ILITGGAGQVGLELQAAAWPEGVVLHAPMRDELDLSDAASVRAAFAAARFAAVINSGAHT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E AF+ NA G +A A GIP I +STDYVFDG P E P PL Sbjct: 67 AVDKAETEVAAAFAANAMGPAVLADATREAGIPLIQVSTDYVFDGSKPVPYVETDPVGPL 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG SKLAGE V + V+LRTAWV S +NFL +MLRLA +R + VV DQ G Sbjct: 127 GAYGASKLAGELAVRAGNPRSVVLRTAWVLSAHRANFLKTMLRLAADRPALRVVGDQHGC 186 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSA +A A+ IA +I ++D + G++H + G +WA A IF SA GGP + Sbjct: 187 PTSARDVAAALKTIALKMIADAD-APTGVYHFV-NAGETTWAGLAGEIFALSAATGGPSA 244 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP+ S L +KL + I W+ V I+ + Sbjct: 245 TVEAIPSSDYPTPAKRPSNSRLSTAKLIRDYGIAPRPWQAAVAEIVHEL 293 >gi|257462295|ref|ZP_05626711.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] gi|317059964|ref|ZP_07924449.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] gi|313685640|gb|EFS22475.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D12] Length = 279 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 13/288 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G GQ+ + + ++ +E I + ++D+ F ++IN AAY Sbjct: 2 ILITGAKGQLGMAFQRLFQREKIEYIATDKEELDITNEIILQDFVKGREISLLINCAAYN 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VDKAE E E +N E G +A A IG I S+D+VFDG +P E NPL Sbjct: 62 QVDKAEAEREECEKLNREAPGKLAVLAKKIGADYITYSSDFVFDGEKNSPYTEEDIPNPL 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+ K GE+ V N ++RT+W++ NF+ +L A ++E+ +V +Q + Sbjct: 122 SVYGRMKWEGEKAVFQEKENSFVIRTSWLFGKDRPNFIRQLLDWADIKQELFMVENQISS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 + A +A ++ T G++H + + G S D A+YI + +G Sbjct: 182 LSYAEDLAYFSWKL-------FQTKQYGLYHFS-NSGESSKYDQAKYILEKIHWKG---- 229 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++R + +P +A RP YS LD SKL +I +W++ + L Sbjct: 230 RLHRAKREDFPQEAKRPKYSKLDSSKLEKVIGEKIPSWEDSICRFLEE 277 >gi|298528457|ref|ZP_07015861.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans ASO3-1] gi|298512109|gb|EFI36011.1| dTDP-4-dehydrorhamnose reductase [Desulfonatronospira thiodismutans ASO3-1] Length = 286 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 15/291 (5%) Query: 3 CLVIGN-NGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 L+ G G + Q+L + + ++ + GR ++DL + + D++ N AY Sbjct: 6 VLIAGGRTGLLGQALVQVMQGEGLKALAPGRKELDLFDARQVEDTIRKNNIDLVANAVAY 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE++ + A+ +N + G + + + ++ STDYVFDG TP P Sbjct: 66 TGVDQAEEDQDEAYRLNRDLPGILGQVCRENNVGLVHYSTDYVFDGKKNTPYSTDDTPRP 125 Query: 121 LNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 L +YG+SKLAGEE + + +ILR+AW++ F +NF+ M+++A+ R +SV+ DQ Sbjct: 126 LCVYGRSKLAGEELLMQSPWDGLLILRSAWLFGPFKTNFVSKMIQMAESGRPLSVIHDQT 185 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT L +AR +++ G+FH+ + G SW + A E+ G Sbjct: 186 GSPTCTLDLARYSLELVKK-------QTSGLFHVV-NKGQASWCELA----SEALMCAGL 233 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S+V + + +YP KA RP+YS LD SK + I W +R + + Sbjct: 234 SSRVNPVSSGEYPQKARRPSYSVLDTSKFSMVTGITPRPWVHALREYVFQV 284 >gi|162149145|ref|YP_001603606.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|209545111|ref|YP_002277340.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|161787722|emb|CAP57318.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] gi|209532788|gb|ACI52725.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter diazotrophicus PAl 5] Length = 297 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LVIG +GQ+A +L + +GRPD+D +P+ + +P +++N AA+TA Sbjct: 6 ILVIGRSGQLATALGRSNSPG--LHCLGRPDLDFDRPETVDTAIAEAAPGLVVNAAAWTA 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AED+ A N +G +A+ + GIP I++STDYVFDG P E PT+P Sbjct: 64 VDAAEDDVAGAERANRDGPAHLARLCAARGIPLIHVSTDYVFDGTKGAPYVETDPTSPRT 123 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SK GE+ + + + +ILRTAWVYS +G NF+ +ML + + VV DQ G P Sbjct: 124 VYGRSKAEGEQAILAVHDRAIILRTAWVYSPYGRNFVRTMLNAGAKNPVLRVVGDQRGNP 183 Query: 183 TSALQIARAIIQIAHNLIENSDTS-LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 TSA +A AI+ IA + + GI H A G +W A ++A G P Sbjct: 184 TSADDLAGAILSIADTIARDGWRDAFAGITH-AAGSGDTTWHGLAVAALQDAARLGRPMP 242 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +PT A RP S LDC++L + +R+ W++ V + + Sbjct: 243 VVEAITTADWPTPAARPQDSRLDCTRLHDVFGVRLPHWRDSVARTVTTL 291 >gi|170288109|ref|YP_001738347.1| dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] gi|33413325|emb|CAD67950.1| putative dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] gi|170175612|gb|ACB08664.1| dTDP-4-dehydrorhamnose reductase [Thermotoga sp. RQ2] Length = 283 Score = 275 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 83/293 (28%), Positives = 152/293 (51%), Gaps = 17/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINP 57 MK L+ G NGQ+ ++ + + VE I + ++D+ + F +P++ IIN Sbjct: 1 MKVLITGANGQLGRAFQELFKNEKVEFIAAPKEELDITDLRKIREFVSK-NPEITHIINC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY VD+AE + + A+ +N G +A ++ IG ++ STDYVF G +P + Sbjct: 60 AAYNKVDEAERDWKTAYLVNGIGPKNLAIVSNEIGAELVHYSTDYVFSGKKGSPYTIYDT 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 ++P+N YG+SK+ GE V S++N Y ++RT+WV+ + F+ +L +K+ + + +V D Sbjct: 120 SDPINKYGESKVLGERFVMSFSNRYYLIRTSWVFGDGMN-FVRKVLEWSKKSKVLRIVDD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + +PT A +A+A ++ G++H+T + G S ++AE+I E G Sbjct: 179 EVSSPTYAPDLAKATWELIKLKA-------YGLYHIT-NSGYCSRYEWAEFILNEIGWDG 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ R + + A RP +S LD L +++ +WK + + Sbjct: 231 ----ELKRAKQEDFNLPAKRPKFSVLDGFGLREFTGMKMESWKRRTTEFIEKL 279 >gi|78357226|ref|YP_388675.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219631|gb|ABB38980.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 294 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 15/291 (5%) Query: 2 KCLVIGN-NGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K +V+G G + Q+L + + ++ GR D D+ + S +PDV+ N A Sbjct: 6 KAVVLGGRTGLLGQALVADLTRAGWQVEAHGREDADVHDSAALEKYICSHAPDVLFNAVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VDKAE+E + A +N + + A + + ++ STD+VF+G TP E T Sbjct: 66 YTQVDKAEEEQDAAMRLNKSLPALLGRLACTGNMHLVHYSTDFVFNGRKETPYTEDDETA 125 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P +IYG SKLAGE+ + I+R++W++ NF+ ++L L + R+EI+VV DQ Sbjct: 126 PQSIYGLSKLAGEQVLLQMNLPRLTIIRSSWLFGPGRGNFVQTILGLCETRQEITVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A + + G+FH++ +GG +W + A E+ Sbjct: 186 VGSPTYTPDLAAGSRLLV-------EKGGTGLFHLS-NGGQATWCELA----AEAVSLAQ 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I + YP +A RPAYS LDCS+ I+ W + +R + Sbjct: 234 KPCQVRPIPSAAYPQRATRPAYSVLDCSRFTGITGIKPRPWIQALREYIFQ 284 >gi|148655561|ref|YP_001275766.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] gi|148567671|gb|ABQ89816.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] Length = 281 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 144/290 (49%), Gaps = 14/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G +GQ+ ++L E++ + D+DL P + +I+PAAY Sbjct: 1 MRIAVTGASGQLGKALQRALCGVHEVVPLSHADLDLEHPDCVQRLVAT-DAQCVIHPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P+ A+ +NA G +A A + P +YIST+ VF+G + P E+ P Sbjct: 60 TNVDGCAHDPDRAYRVNALGTRYVALACQLLDAPLVYISTNEVFNGTATAPYLEYDRPAP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK AGE+ V + + I+R AW++ NF+ ++LRLA+ER +I++V D+ G Sbjct: 120 INPYGYSKWAGEQAVRELLHRFYIVRVAWLFGG-ERNFVRTVLRLARERNQIAMVADEIG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A A A+ ++ +TS G +H+ + G S +FA + G Sbjct: 179 SPTCAPDAAEAVARLI-------ETSCYGTYHLVNE-GSCSRYEFAAATLRLA---GRDD 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I +YP + P Y+ L A IR+ W+E + + + Sbjct: 228 VALQPITLAEYPRASKVPPYTPLRNF-AAADLGIRLRPWEEALAEYVEGV 276 >gi|240140506|ref|YP_002964986.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] gi|240010483|gb|ACS41709.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium extorquens AM1] Length = 296 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 104/291 (35%), Positives = 146/291 (50%), Gaps = 3/291 (1%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M L++G GQ+ L ++ + V + R ++D+ A+ + + +IN AA Sbjct: 1 MDILILGGAGQVGTELQALSWPEGVRVHAPDRQNLDITDEAAVAAALDARAYAAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E A+ +NA +A IP +++STDYVFDG +P N Sbjct: 61 YTAVDKAETEVAAAWRLNALAPALLAAETKRRAIPLVHVSTDYVFDGSGEGFYAPDAPVN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG SK AGE V S + I+RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 PQSVYGASKAAGEMAVRSGNPRHAIVRTAWVVSPHRGNFVKTMLRLANERDRLTVVDDQH 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PTSA + + + + G FH D G +W DFA I +A RGG Sbjct: 181 GCPTSAA-YLAGALAAIALRLAGDEAAPTGTFHCVND-GATTWCDFARAIVAGAARRGGR 238 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L++ + W+ + +IL + Sbjct: 239 SVAVEGIPTAAYPTPAKRPANSRLSTQSLSDAFGLAPRPWEAALDDILDRL 289 >gi|332671009|ref|YP_004454017.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484] gi|332340047|gb|AEE46630.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas fimi ATCC 484] Length = 282 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 92/282 (32%), Positives = 148/282 (52%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V+G +G + Q L ++ E + + R ++D+ + DV++N AA Sbjct: 1 MRWSVVGASGMLGQDLVAVLRDAGETVTALDRDEVDITDLASVRAAL--VDADVVVNTAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD+AE + AF +NA G G +A+ IG +++STDYVFDG ++TP DE +P Sbjct: 59 YTAVDQAETDEARAFDVNATGVGNLARVTRDIGARLVHVSTDYVFDGHAQTPYDEDAPLA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++K AGE V + +++ILRTAW+Y G+ F ++ R+A ER + VV DQ Sbjct: 119 PRSAYGRTKAAGEWAVRAEQPDHLILRTAWLYGAHGACFPKTIARVAAERGGLEVVADQV 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++++ + + G +H T+ G +W +FA+ + G Sbjct: 179 GQPTWTRDVADLVVRLV------AAQAPAGTYHATS-SGTATWHEFAQAAVVSA---GMD 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + V + Y A RP+YS L +L I W+E Sbjct: 229 AAIVRPTTAEAYARPAPRPSYSVLGHDRLRAVGVDPIGDWRE 270 >gi|297194406|ref|ZP_06911804.1| dTDP-4-dehydrorhamnose reductase [Streptomyces pristinaespiralis ATCC 25486] gi|297152260|gb|EFH31623.1| dTDP-4-dehydrorhamnose reductase [Streptomyces pristinaespiralis ATCC 25486] Length = 298 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 135/292 (46%), Gaps = 8/292 (2%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G G + + + + V + V R D+D+ P S P V++N AA Sbjct: 1 MSWLVTGAGGMLGLDVVARLAAEGVPAVPVARADLDITDPDAVRSCLADHRPAVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ A ++N G +A+A G ++ISTDYVF G + P E +PT Sbjct: 61 WTDVDGAEEREAAALAVNGTGTRNVAEACKESGAVLLHISTDYVFAGDATRPYAEDAPTA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++KLAGE V ++R AW+Y G NF+ +M+RL R + VV DQ Sbjct: 121 PRSAYGRTKLAGERAVLELLPETGHVIRAAWLYGAGGPNFVRTMIRLEAARDTLDVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + +A ++++ + T G+ H T+ G +W F IF G Sbjct: 181 RGQPTWSADLAGLLVRLGRAAVAG--TVPAGVHHGTS-RGETTWYGFTREIFRL---LGA 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + + A RPAYS L T + W+E + + Sbjct: 235 DPDRVRPTDSAAFVRPAPRPAYSVLGHEGWRGTGIEPVRDWREALAEAFPAL 286 >gi|206968407|ref|ZP_03229363.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1134] gi|206737327|gb|EDZ54474.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus AH1134] Length = 246 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 95/253 (37%), Positives = 135/253 (53%), Gaps = 12/253 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 P +II+ AAYT VD AE E + A+ INA GA +A A+ +G + Sbjct: 2 TNISRIQQVVQEIKPHIIIHCAAYTKVDHAEKEQDFAYRINAIGARNVAVASQLVGAKLV 61 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 YISTDYVF G DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+ Sbjct: 62 YISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGN 121 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +M+RL KER EISVV DQ G+PT + I ++ H TSL G +H++ + Sbjct: 122 NFVKTMMRLGKERDEISVVADQVGSPTYVADLNMVINKLIH-------TSLYGTYHVS-N 173 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 G SW +FA+ IF + V + T+++ A RP YS + L ++ Sbjct: 174 SGSCSWFEFAQKIFSYA----NMKVNVLPVSTEEFGAAAARPKYSVFQHNMLRLNGFSQM 229 Query: 277 STWKEGVRNILVN 289 +W+EG+ + Sbjct: 230 PSWEEGLERFFIE 242 >gi|83310572|ref|YP_420836.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Magnetospirillum magneticum AMB-1] gi|82945413|dbj|BAE50277.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Magnetospirillum magneticum AMB-1] Length = 296 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 148/294 (50%), Gaps = 8/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSM-CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G +G++ ++L+ Q + +GR +D+ P+ + V++N AA Sbjct: 1 MHILVTGADGRVGRALARAALPQGATLTALGRQQLDITDPQAVDRLLTLHACSVVVNTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD+AE E A +IN EG +A+A + GIP I++STDYVFDG S P E +P Sbjct: 61 FTAVDRAETETAAAMAINGEGPAHLARACAARGIPLIHLSTDYVFDGRSPEPYREDAPMA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SK AGEE V ++ ILR +W+Y +F+ +M+ + R + VV DQ Sbjct: 121 PLSVYGASKAAGEEAVRWLQPDHAILRVSWLYGGERGDFVRAMVGAIRAGRPLRVVDDQI 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T + +A A++ +A ++ S RG +H A GG SW + A I E G Sbjct: 181 GGLTHSDSVATAVLALADKMLRQSL--ERGTYHFAA-GGAASWHEIAALILSELTRAGIG 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNILVN 289 + Y A RPA S LDC K W++ +R IL Sbjct: 238 PVPLEATSAAAYGLPAARPANSLLDCGKFDRLVGAERPHWQDRLIPELRRILDE 291 >gi|86739428|ref|YP_479828.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3] gi|86566290|gb|ABD10099.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. CcI3] Length = 298 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 26/290 (8%) Query: 6 IGNNGQIAQSLSSMCVQDVE--------IIRVGRPDIDLLKPKDFASFF-LSFSPD---- 52 G GQ+ L + + R + D+ P + P Sbjct: 2 TGAAGQLGADLCRLLEARAAEPGSPVSGWAGLTRAEFDITDPARVRAVLRDQARPAKIQG 61 Query: 53 --VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 V+ N AA+T VD AE + A+++NA G +A A +G I+ISTDYVFDG + Sbjct: 62 GLVVFNTAAWTNVDAAESDEAGAYAVNATGPAHLAAACAEVGATLIHISTDYVFDGRAAK 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKER 169 P + PT P++ YG++KLAGEE V + + ++RTAWVY GSNF+ ++ RLA+ER Sbjct: 122 PYEVNDPTGPVSAYGRTKLAGEEAVRALLPDASYVVRTAWVYGRTGSNFVKTISRLARER 181 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +SVV DQ G+PT + +A ++++A S T+ G++H T + G +W FA I Sbjct: 182 DTLSVVDDQVGSPTWSADLASGLLELA------SSTAPTGVYHCT-NAGETTWFGFAREI 234 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 A G +KV T+ +P A RPAY+ L + W Sbjct: 235 V---AALGQDPAKVTPTTTEAFPRPARRPAYAVLSGRSWVDAGLTPPRAW 281 >gi|325265874|ref|ZP_08132560.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] gi|324982512|gb|EGC18138.1| dTDP-4-dehydrorhamnose reductase [Kingella denitrificans ATCC 33394] Length = 313 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 11/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G NGQ+ + + + E+I +D+ + +F PDVIIN A Y Sbjct: 27 MRILLTGANGQVGRCIKQQKSEHWEMIAADSNTLDITSAAAVNNMVQNFEPDVIINAAGY 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ AE E F++NAEG +A+ A GI I+IS+DYVFDG R P E NP Sbjct: 87 TNLEAAECHKEQVFAVNAEGPRILAETAARAGIRFIHISSDYVFDGQKRMPYTENDYANP 146 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR--LAKERREISVVCDQ 178 L+ Y KSKLAGE S + +I+R++WV+S F ++ + R L E+ + D+ Sbjct: 147 LSTYAKSKLAGELLALSANPDSIIVRSSWVFSEFDNHCNNFVKRVLLQAASGEVKTLSDK 206 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A +AR ++ +A + RGI+H D V+ +FA+ + + G Sbjct: 207 IGCPTYAGDLARIMVDLA-----QCRQAPRGIYHYCGDK-AVNRLEFAQAVVRALPDGGH 260 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + + RP YS L C K+ S W+ ++ I+ + Sbjct: 261 --VAVREVPAAENAERTPRPPYSVLSCEKIR-ALGYEASDWQSALKRIVPEL 309 >gi|88855653|ref|ZP_01130316.1| dTDP-4-dehydrorhamnose reductase [marine actinobacterium PHSC20C1] gi|88814977|gb|EAR24836.1| dTDP-4-dehydrorhamnose reductase [marine actinobacterium PHSC20C1] Length = 284 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 14/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + V+G G + L D + + R ++D+ + DV++N +AYT Sbjct: 3 RIAVVGAGGMLGTDLMRALS-DHDATALTRNELDITDADAAVEVLSGY--DVLVNASAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + E A +NA G +A AA G + +STDYVFDG + P E +P +P+ Sbjct: 60 RVDDAESDEENAHLVNAVGPHNLALAAARHGSRLVQLSTDYVFDGTATEPYPEDAPRHPV 119 Query: 122 NIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K AGE + I+RTAW+Y GS+F +ML+LA +R + VV DQ G Sbjct: 120 SAYGRTKAAGELLALEHNPGRTAIVRTAWLYGKHGSSFPRTMLKLAADRDTLDVVNDQLG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A I+ + + GIFH T + G SW D A+ +F + G Sbjct: 180 QPTWTGDLAAQIVALIDA------GTPSGIFHGT-NAGRASWFDLAQAVFVCA---GLDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + + A RP++S L + + WK+ ++ Sbjct: 230 DRVKPTDSSAFQRPAPRPSFSVLGHRAWLDAGIEPMRDWKQALQ 273 >gi|218232620|ref|YP_002366003.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus B4264] gi|218160577|gb|ACK60569.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus B4264] Length = 246 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 95/253 (37%), Positives = 136/253 (53%), Gaps = 12/253 (4%) Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 P +II+ AAYT VD AE E ++A+ INA GA +A A+ +G + Sbjct: 2 TNISRIQQVVQEIKPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLV 61 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 YISTDYVF G DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+ Sbjct: 62 YISTDYVFQGARPDGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGN 121 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 NF+ +M+RL KER EISVV DQ G+PT + I ++ H TSL G +H++ + Sbjct: 122 NFVKTMMRLGKERDEISVVADQVGSPTYVADLNMVINKLIH-------TSLYGTYHVS-N 173 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 G SW +FA+ IF + V + T+++ A RP YS + L ++ Sbjct: 174 RGSCSWFEFAQKIFSYA----NMKVHVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFSQM 229 Query: 277 STWKEGVRNILVN 289 +W+EG+ + Sbjct: 230 PSWEEGLERFFIE 242 >gi|294675731|ref|YP_003576346.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter capsulatus SB 1003] gi|294474551|gb|ADE83939.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter capsulatus SB 1003] Length = 282 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 113/290 (38%), Positives = 152/290 (52%), Gaps = 10/290 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G GQ+A L Q +GR DL P+ A+ + +IN AA+ Sbjct: 1 MKVLVFGRTGQVATELQRQLPQ---ARFLGREQADLADPEACAAAIRDSDAEAVINAAAW 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVDKAE E A +N A+A+A + GIP +++STDYVF G P E P P Sbjct: 58 TAVDKAETEEAAATVVNGAAPAAMARACAARGIPFLHVSTDYVFSGAGSAPWVETDPVAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG+SKLAGE+ V + ILRT+WV+S G+NF+ +MLRL++ R ++VV DQ G Sbjct: 118 QNAYGRSKLAGEQGVRAAGGAAAILRTSWVFSAHGANFVKTMLRLSESRDALNVVEDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A IA A + + E+ + ++A VSWADFA IF + G Sbjct: 178 GPTPAADIAAA---LIVDGAEDGRRTSPAAPIISAASPWVSWADFAREIFALA----GRK 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S +DC+ LA I W+ G+ +L + Sbjct: 231 VAVTGIPTAAYPTPALRPLNSRMDCAALARDFGIAAPDWQAGLSKVLKEL 280 >gi|312199899|ref|YP_004019960.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] gi|311231235|gb|ADP84090.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EuI1c] Length = 292 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 20/293 (6%) Query: 6 IGNNGQIAQSLSSMCVQDVEIIR---VGRPDIDLLKPKDFASFF-LSFSPD------VII 55 IG+ GQ+ L + D + + R + D+ P + P ++ Sbjct: 2 IGSGGQVGSELCRLLALDPRLPAIAGLTRSECDITDPARLRAVIRDQARPAKVQGGLTVV 61 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA+T VD AE + A+++NA G +A A G I++STDYVFDGL+ P + Sbjct: 62 NTAAWTDVDGAETDEVGAYAVNATGPAHLAAACAEAGATLIHLSTDYVFDGLADKPYEVD 121 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 T+P + YG++KLAGE+ V + + ++RTAWVY G NF+ +M RLA+ER ++VV Sbjct: 122 DQTSPASAYGRTKLAGEQAVLALCPSSYVVRTAWVYGAVGKNFVKTMARLARERDTLTVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT + +A +I++ + + G++H T + G +W FA+ I E Sbjct: 182 DDQRGSPTWSADLATGLIELILS------GASFGLYHFT-NAGDTTWHSFAQAIMEEI-- 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +KV T +P A RPA+S L + W++ + Sbjct: 233 -GEDPAKVLPTTTAAFPRPAPRPAFSVLSNRSWLDAGLTAPRPWRDALSAAFA 284 >gi|297162853|gb|ADI12565.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces bingchenggensis BCW-1] Length = 302 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 12/294 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G+ G + Q + + + E +D+ P ++IN AA+ Sbjct: 5 WLVTGSGGLLGQDVMTGLREAGETAKGFDHKGLDITDAHAVRDALAKHRPAIVINCAAFA 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT----PIDEFSP 117 A DKAE + E A IN EG +A A I+ISTDYVF G P E +P Sbjct: 65 APDKAETDEEGALRINGEGTRNLADACAEFQAHLIHISTDYVFSGDDSGGAAVPFAEDAP 124 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P+N YG++K+AGE V + + RTAW++ +NF+ +M+RL +E+ + VV Sbjct: 125 TCPVNAYGRTKVAGERAVFACLPRTGYVFRTAWLFGAGRANFVRTMIRLEREKDHVDVVA 184 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT + A ++++ + + G +H +A GG SW + A+ +F Sbjct: 185 DQCGQPTWTMDAAGQLLRLGRAALGGQAPA--GAYHGSA-GGQASWYELAQEVFRL---L 238 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + A RPAYS L ++ I W+ G+ ++ Sbjct: 239 GADPQRVRPSTGAAFGRPAPRPAYSVLGHARWHTVGIEPIRHWRAGLEAAFPSL 292 >gi|84498709|ref|ZP_00997450.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84498714|ref|ZP_00997455.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84381009|gb|EAP96897.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] gi|84381014|gb|EAP96902.1| dTDP-4-dehydrorhamnose reductase [Janibacter sp. HTCC2649] Length = 284 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 142/285 (49%), Gaps = 13/285 (4%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G +A L + ++ + R D+D+ + DV+ N AA+ Sbjct: 3 RWLVTGAGGMLAHDLLPRLTDAGHDVTPLTRTDLDITDASACRAAVEGH--DVVANLAAW 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE AF++NA GA +A A + +++STDYVF G + TP +P P Sbjct: 61 TAVDDAESHEGAAFAVNALGAANVAAACERSSARLVHVSTDYVFSGDTSTPYAVNAPVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K AGE V ++ +++RTAW+Y G NF+ ++ RLA ER I+VV DQ G Sbjct: 121 RSAYGRTKAAGEWAVLAHCPTALVVRTAWLYGAGGPNFVATISRLATERDTIAVVDDQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A AI ++ + G++H T G +W DFA IF E G Sbjct: 181 QPTWTADLAEAIPRLVEADAQG------GVWHGTG-SGQTTWFDFARAIFEE---LGLDP 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V T +P A RP +S LD +K + W++G+ Sbjct: 231 ERVTPTTTASFPRPAPRPTFSVLDDAKWRTHGLDPLPHWRDGLNR 275 >gi|332294914|ref|YP_004436837.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM 14796] gi|332178017|gb|AEE13706.1| dTDP-4-dehydrorhamnose reductase [Thermodesulfobium narugense DSM 14796] Length = 277 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 153/288 (53%), Gaps = 18/288 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK +++G+NGQ+A+ + +VE++ + +D+ + PDV++N AA Sbjct: 1 MKAILLGSNGQLAKEFINNSSNFNVELVSFTKDMLDITNFFELKEAIKKSMPDVVLNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE E A+ +NA G +A ++ ++ STDYVFDG+ P + N Sbjct: 61 YNLVDKAESNWEAAYRVNALGPRNLAVLSNEFNYILVHFSTDYVFDGVKSKPYLIYDEPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKL+GE +++S + Y ++RT+WV+ ++F ++ +K + + VVCDQF Sbjct: 121 PISVYGRSKLSGEREISSLCSKYYVIRTSWVFGDGPNSFPRKLIEWSKGKDNLKVVCDQF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PTSA +A + N+ GI+H+T + G S ++A++IF + Sbjct: 181 SSPTSARYLASKTMYTIRNM-------PYGIYHIT-NSGYCSRFEWAKFIF----DFLKI 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 K+ + + ++ T A RP +S LD L + WK+ N L Sbjct: 229 DIKITPVSSDEFTTPAKRPPFSVLDNFPLNSD-----EDWKDSTINYL 271 >gi|158317641|ref|YP_001510149.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] gi|158113046|gb|ABW15243.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] Length = 321 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 93/295 (31%), Positives = 146/295 (49%), Gaps = 25/295 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI--------IRVGRPDIDLLKPKDFASFF-LSFSPD 52 + LV G GQ+ L + ++ + R ++DL + P Sbjct: 22 RILVTGAGGQLGSDLCRLLDAQSQVDNPRVRAWCGLARSELDLADAAQVRAVIADQARPA 81 Query: 53 ------VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +IN AA+T VD AE + A+++NA GA +A A G +++STDYVFDG Sbjct: 82 KIQGGLAVINTAAWTNVDGAESDEAGAYAVNATGAAHLAAACAQAGAALVHLSTDYVFDG 141 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + P + P P+++YG++KLAGEE V + ++RTAWVY G NF+ ++ RLA Sbjct: 142 DATKPYETDDPPAPVSVYGRTKLAGEEAVLALCPESYVVRTAWVYGRTGGNFVKTIARLA 201 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 +ER E++VV DQ G+PT ++ +A ++ + G++H TA G +W FA Sbjct: 202 RERDELAVVADQHGSPTWSVDLAAGLLDLVTARPA------PGVYHCTA-AGETTWYGFA 254 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 I A G +KV T+++P A RPAYS L + + +W + Sbjct: 255 RAIV---AALGQDPAKVRPTTTEEFPRPARRPAYSVLSARSWLDAGLRPLRSWDD 306 >gi|294102763|ref|YP_003554621.1| dTDP-4-dehydrorhamnose reductase [Aminobacterium colombiense DSM 12261] gi|293617743|gb|ADE57897.1| dTDP-4-dehydrorhamnose reductase [Aminobacterium colombiense DSM 12261] Length = 291 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 17/294 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK + G GQ+A + + ++ V R ++D+ PDV+IN AA Sbjct: 1 MKFFITGGGGQLALAFQRLLKEENLPFAVYSRQELDITDITRVRKRMQEEKPDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + VD AE A+ +NA G +A AA+ +GIP + S+DYVF+G S + Sbjct: 61 WNDVDSAEQNWRGAYMVNAIGPRNLAIAAEELGIPLVTFSSDYVFNGKSVRSWTIADKPD 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERREISVVC 176 P+N+YG++KL GEE V + ++I+R +WV+ SNFL +LR ++E+ E+ +V Sbjct: 121 PINVYGQTKLLGEEFVKDHIRRFLIVRVSWVFGPEGREESNFLKKVLRWSREKDELKIVS 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ +PT A +A ++++ G +H++ G S ++A + E Sbjct: 181 DQISSPTYAPDLAERVMELLTLRA-------WGTYHLSC-SGRCSRYEWASFALKEI--- 229 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + + ++ T A RPA S LD L I + W++ L I Sbjct: 230 -GWKKNIVQAQSNEFRTLAQRPAMSSLDSFPLEE-FGIFMPRWEDSTLRFLKAI 281 >gi|330994212|ref|ZP_08318140.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] gi|329758679|gb|EGG75195.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] Length = 294 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 154/289 (53%), Gaps = 6/289 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G +GQ+A +L++ ++IRVGRPD+D +P + + P +++N AA+TA Sbjct: 5 ILVTGGSGQLACALAA----HADVIRVGRPDLDFDRPDTIDTVLRAHRPAIVVNAAAWTA 60 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE E A N G +A +G I+ISTDYVF G +P E P +P + Sbjct: 61 VDAAESHMEEADRANHTGPARMAARCREMGSRFIHISTDYVFSGDKGSPYVESDPVDPRS 120 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K AGE+ V + + +ILRTAWVYS + NF+ +M+ A R E+ VV DQ G P Sbjct: 121 VYGSTKAAGEQAVLAACPDSIILRTAWVYSPYNRNFVRTMIEAAARRPELRVVGDQIGNP 180 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 TSA +A I+ I + + GI+H + G SW + A +A G P S Sbjct: 181 TSADALADVIMHIIARIRDTGWRPEYAGIYHAAGE-GSASWYELACAAIKAAARHGNPES 239 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT AHRP + LDC++L + W+ V ++ + Sbjct: 240 VIEPITTADWPTPAHRPHDARLDCTRLKQVFDCAPGPWRPEVERVVGEL 288 >gi|323698129|ref|ZP_08110041.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. ND132] gi|323458061|gb|EGB13926.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans ND132] Length = 291 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + V+G G + Q+L++ + + + R D D+L P + PD+++N Sbjct: 7 RIAVLGGRTGLLGQALTTAFGRAGALPFPLSRRDCDVLDPLSVEQWLDKNDPDLLVNATG 66 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD AEDEP+ AF++N +A A IP ++ STD+VF+G RTP E+ N Sbjct: 67 YTQVDLAEDEPDQAFALNGSVPPLLATLAARRAIPFVHYSTDFVFNGRKRTPYTEYDEPN 126 Query: 120 PLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +++YG SK GE + +I+R +W++ +NF+ +L LA R+++VV DQ Sbjct: 127 AVSVYGISKADGERGLLKLGYERTLIIRISWLFGPGRTNFVKKILGLADVHRKLTVVNDQ 186 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+P+ IA +++ + G+FH+ A+ G SW A + G Sbjct: 187 VGSPSYTPDIAENTVKLL-------EKDATGLFHL-ANSGETSWHGLA----NTAVNLAG 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T YPTKA RP+YS LD +K T I W++ +R + Sbjct: 235 KDCTVSPVPTTAYPTKAFRPSYSVLDLAKFTRTTGITPRRWEDALRQYV 283 >gi|33594890|ref|NP_882533.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis 12822] gi|33564966|emb|CAE39913.1| dTDP-4-dehydrorhamnose reductase [Bordetella parapertussis] Length = 318 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 156/294 (53%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + + R DL A+ +++P ++IN AAY Sbjct: 21 MNILLLGRTGQIGDALLAHPLAWARLAALERRQADLRDLGRLAAVLDAYAPRILINAAAY 80 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 81 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 140 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 141 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 200 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PT A +IA Q G++H++A GG VSW A +I + G Sbjct: 201 APTWAGRIAAVTWQAIDAHRRRRLPD--GLWHLSA-GGHVSWHGLACHIVARARRAGLAL 257 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + T QYP A RPA S LDC L + + W+ + ++ + Sbjct: 258 SLDPAHIRPVTTAQYPLPAPRPANSRLDCGALRDALEPELPDWQVDLDAVVDAL 311 >gi|33599165|ref|NP_886725.1| dTDP-4-dehydrorhamnose reductase [Bordetella bronchiseptica RB50] gi|33575211|emb|CAE30674.1| dTDP-4-dehydrorhamnose reductase [Bordetella bronchiseptica RB50] Length = 298 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 155/294 (52%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + R DL A+ +++P ++IN AAY Sbjct: 1 MNILLLGRTGQIGDALLAHPPAWARLAALERRQADLRDLGRLAAVLDAYAPRILINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 61 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 121 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 PT A +IA Q G++H++A GG VSW A +I + G Sbjct: 181 APTWAGRIATVTWQAIDAHRRRRLPD--GLWHLSA-GGHVSWHGLACHIVARARRAGLAL 237 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + T QYP A RPA S LDC L + + W+ + ++ + Sbjct: 238 SLDPAHIRPVTTAQYPLPAPRPANSRLDCGALRDALEPELPDWQVDLDAVVDAL 291 >gi|126741095|ref|ZP_01756777.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. SK209-2-6] gi|126717859|gb|EBA14579.1| dTDP-4-dehydrorhamnose reductase [Roseobacter sp. SK209-2-6] Length = 287 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 116/288 (40%), Positives = 160/288 (55%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L++ + +GR + DL P A+ + +P +IN AAYTA Sbjct: 7 ILVFGKTGQLARELAAY----DNVTCLGRGEADLTDPAACAAAIKAHAPAAVINAAAYTA 62 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VDKAE+E +A IN E GA+A+A ++GIP + +STDYVFDG TP P+N Sbjct: 63 VDKAEEEEALATVINGESPGAMAEACAALGIPFVTVSTDYVFDGSGTTPWQAGDAVAPVN 122 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE + + ILR +WV S G NF+ +MLRL ER ++++ DQ G P Sbjct: 123 AYGRSKLAGEEATRAAGGTHAILRCSWVVSCHGGNFVKTMLRLGAEREALTIIADQIGAP 182 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A +ARA +++A L D G +H+ VSWA FA IF ++ Sbjct: 183 TPARDLARACLEMAGQL--QQDPGKSGTYHLQG-RPEVSWAGFAREIFAQANVA----CT 235 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RP S LDC+ L N I W++G+ IL ++ Sbjct: 236 VTDIPTTDYPTPAARPLNSRLDCTALENVFGISQPDWRQGLSEILKDL 283 >gi|316935620|ref|YP_004110602.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris DX-1] gi|315603334|gb|ADU45869.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris DX-1] Length = 291 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 114/292 (39%), Positives = 152/292 (52%), Gaps = 5/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G +GQ+A +L + V + +GR D+D+L ++N AA Sbjct: 1 MTVLVFGRSGQVATALVREAAARGVALQALGRGDVDVLDEAALVDAMTRIGAAAVVNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E + AF++NA +AK +P +++STDYVFDG + P E P Sbjct: 61 YTAVDKAETERDAAFALNARAPELMAKVCADRSLPFVHLSTDYVFDGSAHEPYREDHPLA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG SK GE V ++LRTAWVY G NF+ +MLRL +ER E+ VV DQ Sbjct: 121 PLGVYGASKAEGERLVMQQHPQAIVLRTAWVYYEQGQNFVRTMLRLGRERDEVRVVDDQV 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A IA + I L + G+FH G VSW FA+ IF E+A G Sbjct: 181 GNPTYAADIAETCLAIVAQL--GAGARHAGVFHYAG-SGAVSWFGFAQAIFAEAARAGRR 237 Query: 240 YSK-VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V I T +YPT A RPA S L C +L + I W + +R L + Sbjct: 238 VPRSVVPITTAEYPTPAKRPANSQLSCGRLNDAFGIAPKPWGDRLRVCLERM 289 >gi|168705489|ref|ZP_02737766.1| dTDP-4-dehydrorhamnose reductase [Gemmata obscuriglobus UQM 2246] Length = 288 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK V+G GQ+ + L E++ + R ++DL +P+ + S PDV +N AAY Sbjct: 1 MKIAVLGAAGQLGRDLCPRLAVFGEVVPLSRAELDLERPEGIRAAVESVRPDVFVNCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPT 118 VDKAE PE A ++N G A+A A I ++ STDYVF + P E Sbjct: 61 NLVDKAESAPEAARAVNDAGVEALAAACAGIWAKLVHFSTDYVFGADAVRSAPYTETDEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREIS 173 P++ YG+SKL GE + + N +++RT +Y G NF+ +MLR+A + + + Sbjct: 121 GPVSAYGESKLRGEHAALAASANNLVIRTCGLYGVWGSGGKGGNFVETMLRVAGQGKPLR 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ TP+ +A A + + G+FH+ +GG +W +FA IF +S Sbjct: 181 VVADQRCTPSYTADVADATVALLGRGAG-------GLFHVV-NGGDCTWHEFAAEIFRQS 232 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + I + ++ A RP YS L +KL W E + L Sbjct: 233 ----GLVPDLTPITSAEFGAAARRPPYSVLSTAKLVAHDVPAPRPWTEALAAYLRE 284 >gi|60418018|dbj|BAD90658.1| polysaccharide synthesis enzyme [Acetobacter tropicalis] Length = 303 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 150/289 (51%), Gaps = 4/289 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A SL ++ + VGRP D KP+ A+ + P + N AA+TA Sbjct: 11 ILVTGGTGQLATSLVTL--GGPRVHCVGRPSFDFDKPETLAATLEAVKPVAVANAAAWTA 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE EPE A N G +A+ IP I++STDYVF G TP E +P Sbjct: 69 VDLAEKEPEAAARANTSGPAELARLCAQQNIPLIHVSTDYVFSGDKGTPYVETDAVSPDT 128 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG +K GE++ + +I RT+WVYS G NF+ +ML + + VV DQ G P Sbjct: 129 VYGSTKAEGEKQALAANPKTLIFRTSWVYSAHGKNFVRTMLNAGAKNPALKVVGDQKGNP 188 Query: 183 TSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 TS+ +ARAI+ + L ++ GI+H+ G +W A ++A+ G P Sbjct: 189 TSSDDLARAILSVLAILEKDGWKDDFAGIYHVRG-TGETTWHGLAVEALKDAADHGQPMP 247 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T+ +PT A RPA S +D SKL I + W+E V+ ++ I Sbjct: 248 TVTAIRTEDWPTPAKRPADSRMDNSKLTRVFGITMPAWEESVKKVVNQI 296 >gi|254168139|ref|ZP_04874986.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] gi|197622905|gb|EDY35473.1| dTDP-4-dehydrorhamnose reductase [Aciduliprofundum boonei T469] Length = 284 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 20/295 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +IG NGQ+ L + + + + D+D+ P+VIIN AAY Sbjct: 1 MKVAIIGANGQLGSDLVEIFGERA--VPLTHNDLDVTNYDSL-KILKKIDPNVIINTAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF++NA GA +AK A+ + +YISTDYVFDG P E NP Sbjct: 58 VRVDDAEKEPKKAFNVNAIGALYVAKIANELDAINVYISTDYVFDGRKGAPYTEEDMPNP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAKERREISVV 175 +N+YG SK GE +Y+ Y ++R A +Y G NF+ ++ AK EI VV Sbjct: 118 INVYGASKYMGEIFTRNYSKKYYVVRVASLYGKKGARGKGGNFVNWIIEKAKGGEEIKVV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT +A+ + ++ E GI+HM A+ G SW +FA+ I Sbjct: 178 DDIIMSPTYTRDVAKTLKKLLEIKPE------YGIYHM-ANEGYCSWYEFAKSILDII-- 228 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + I + + A RP +S + + +R+ W+E +R L +I Sbjct: 229 --GYRISLKSIKSVELNRLAKRPIFSAIKNKNIKRI-GLRMPKWEEAIRKYLEDI 280 >gi|170726038|ref|YP_001760064.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] gi|169811385|gb|ACA85969.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] Length = 307 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 161/292 (55%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LVIG +GQ+A L+ DVE+ + R +IDL +P D + P++IIN + +T Sbjct: 21 KVLVIGKHGQLALELADTVPTDVELTCLSRTEIDLTEPSDINRVISTIKPNIIINVSGFT 80 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE E A+++N + IA AA + + I+ISTD++FDG S+ P NP+ Sbjct: 81 DVEAAESSYENAYALNGKAVDNIASAAFNAKVRFIHISTDFIFDGSSQRPYTVDDKPNPI 140 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG+SKLAGE +A Y +N+ I+RT+W+YS FG NF+ +ML L E+ ++++V DQ G Sbjct: 141 NVYGQSKLAGEVAIAKYHSDNFTIVRTSWLYSRFGKNFVKTMLNLMSEKEQLNIVNDQLG 200 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 +PT A +A + + + I+H + D G SW +FA I + G Sbjct: 201 SPTHAKGLAHFLWCLIKL------EKWQAIYHWS-DLGITSWYEFAIAIQELGIKHGLLQ 253 Query: 240 -YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + YP+ A RP++S LDC+ + W++ + + + + Sbjct: 254 YQIPIKPILSVNYPSLAKRPSFSALDCTASQMILTGK--AWQDELTDFIKAL 303 >gi|159046646|ref|YP_001542315.1| dTDP-4-dehydrorhamnose reductase [Dinoroseobacter shibae DFL 12] gi|157914405|gb|ABV95834.1| dTDP-4-dehydrorhamnose reductase [Dinoroseobacter shibae DFL 12] Length = 285 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 122/288 (42%), Positives = 160/288 (55%), Gaps = 10/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L++ E + +GR DL P A+ + +P +IN AAYTA Sbjct: 2 ILVFGQTGQVARELAARVP---EALFLGRDAADLSDPDACAAALRAAAPSAVINAAAYTA 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE E ++A IN GA+A AA +G+P ++ISTDYVFDG P +P PL Sbjct: 59 VDRAEAEEDLATRINGAAPGAMAVAAAELGVPFVHISTDYVFDGAGTAPFAPDAPVGPLG 118 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE V + + ILRT+WV S G NF+ +MLRL ER +S+V DQ G P Sbjct: 119 AYGRSKLAGEEAVRAVGGVHAILRTSWVVSAHGGNFVKTMLRLGAERDSLSIVADQVGGP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T+A IA A ++IA L +D G +H VSWADFA IF ++ G Sbjct: 179 TAAGDIAAACLKIAARLA--ADPGKSGTYHFAG-APDVSWADFAREIFGQA----GLDCA 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W E + IL ++ Sbjct: 232 VTDIPSAAYPTPARRPHNSRLDCSSLQAAFGIARPDWAESLSGILRDL 279 >gi|197106765|ref|YP_002132142.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] gi|196480185|gb|ACG79713.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] Length = 300 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 111/290 (38%), Positives = 147/290 (50%), Gaps = 3/290 (1%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L G GQ+A+ + DV + + R + DL P A PDV++ AAY Sbjct: 4 RVLQFGTTGQLAREVIRQAPDHDVALTALSRAEADLADPDKAARRVAEHRPDVVVLAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE E +A +NAE GAIA+A S G +++STDYVFDG P PT P Sbjct: 64 TAVDQAETETLLARRVNAEAPGAIARACASCGAALVHVSTDYVFDGAKGAPYLPNDPTGP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG +KL GE KV +++RT+WV S G NF+ +MLRLA E R ++VV DQFG Sbjct: 124 LNTYGLTKLEGERKVLDACPRALVVRTSWVVSAHGRNFVKTMLRLAAEGRPLNVVDDQFG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA +A ++ A L + H A+ G SW FAE IF + G Sbjct: 184 RPTSAADLAGFVLSQARRLADAPAGDPAFGLHHFANAGETSWRGFAEGIFDLA--YGDRA 241 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T P A RPA LD S + W+E + I+ + Sbjct: 242 PAVGAIATADRPAPAARPARGTLDTSATEAVFGVTPRPWREALAEIVAEL 291 >gi|226365778|ref|YP_002783561.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus B4] gi|226244268|dbj|BAH54616.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase [Rhodococcus opacus B4] Length = 282 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 95/281 (33%), Positives = 144/281 (51%), Gaps = 12/281 (4%) Query: 2 KCLVIGNNGQI-AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 LV G GQ+ L + VG ++D+ + + S V+IN AAY Sbjct: 3 NILVTGARGQLAGHLLRRAGAMGMPARGVGSDELDITDRDAVDAQVEAGS--VVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + + A ++N +G +A A +G I++STDYVF G TP + +PT P Sbjct: 61 TAVDAAESDEDAARAVNEDGPANLAAACARVGARLIHVSTDYVFAGDGDTPYEVDAPTGP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG++KLAGE V + + ++RTAWVYS GS+F+ +M RL +ER + VV DQ G Sbjct: 121 ATAYGRTKLAGERAVHAALPSAHVVRTAWVYSGVGSDFVSTMRRLERERDTVDVVDDQVG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A A++++A + + H T + G SW D A +F E+ G Sbjct: 181 SPTFAGDLADALLELAGRSDIGAP-----VLHAT-NSGRASWFDLARAVFEEA---GADP 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 +V + Q+ A RPA+S L A+ + W++ Sbjct: 232 QRVRPCTSAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWRD 272 >gi|3256060|emb|CAA07388.1| StrL [Streptomyces glaucescens] Length = 305 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 9/292 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIR-VGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G +G + + L++ + V ++ V R D+D+ P + P V++N AA Sbjct: 8 RWLVTGASGMLGRELTARLSRRGVPVVPLVRRADLDVTDPAAARALLARHRPAVLVNCAA 67 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE A ++N EG G +A+A + G I +STDYVF GL+ P E P Sbjct: 68 WTAVDAAEAHEARALAVNGEGPGHLARACRATGTRMIQLSTDYVFAGLADRPYREDDPPA 127 Query: 120 PLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P YG++KLAGE V + + ++RTAW+Y G+NF+ +M+RLA + VV DQ Sbjct: 128 PRTAYGRTKLAGERAVLDTLPDGGYVVRTAWLYGSGGANFVSTMIRLAAAEGTVPVVDDQ 187 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A ++ A T+ G++H + G +W A IF + G Sbjct: 188 HGGPTWTGDLADRLL--ALGAAALRGTAPPGVYH-AVNAGSTTWHALAREIFRRA---GA 241 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + + A RP YS L + + W+ + + Sbjct: 242 DPGRVRPIGSGELARPAARPPYSVLAQGRWRAAGLAPLRDWRAALAEAFPAL 293 >gi|317153029|ref|YP_004121077.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio aespoeensis Aspo-2] gi|316943280|gb|ADU62331.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio aespoeensis Aspo-2] Length = 293 Score = 271 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 88/288 (30%), Positives = 139/288 (48%), Gaps = 15/288 (5%) Query: 3 CLVIGN-NGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ G G + Q+L+ + + + D D+L P+ PD+++N AAY Sbjct: 8 VIIFGGRTGLLGQALTRAFRLAGARPVPLSSQDCDILDPRGVDLLLDRRDPDLMVNAAAY 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AED+ E+AF++NA +A A IP ++ STD+VF G TP + P Sbjct: 68 TQVDLAEDQEEMAFALNATAPPLLASLAAKRLIPFVHFSTDFVFCGNKHTPYLPYDDPCP 127 Query: 121 LNIYGKSKLAGEEKVASY-TNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 ++YG SK GE + + +I+R +W++ +NF+ +L L + R ISVV DQ Sbjct: 128 FSVYGISKADGERGLLRFGYERTLIIRISWLFGPGRTNFVDKILSLCETRGTISVVNDQT 187 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+P+ +A + + + GI H A+ G +W A E+ G Sbjct: 188 GSPSYTPDVAVNTLALLAH-------DATGI-HHVANSGETTWHGLA----SEAVALAGL 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T YPTKA RPAYS LD S+ T + WK+ + + + Sbjct: 236 DCTVEPVPTSAYPTKAVRPAYSVLDLSRFIQTTGVTPRHWKQALADYV 283 >gi|269978090|ref|ZP_06185040.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris 28-1] gi|306818461|ref|ZP_07452184.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris ATCC 35239] gi|307700929|ref|ZP_07637954.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris FB024-16] gi|269933599|gb|EEZ90183.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris 28-1] gi|304648634|gb|EFM45936.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris ATCC 35239] gi|307613924|gb|EFN93168.1| dTDP-4-dehydrorhamnose reductase [Mobiluncus mulieris FB024-16] Length = 286 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 144/296 (48%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G G + Q + + ++ E+ + RP +DL S DV++N AA Sbjct: 1 MRWIVLGAKGMLGQDVVELLQSKNQEVQSLDRPQVDLTLFDSLRSQVRDA--DVVVNCAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPIDEFSP 117 +TAVD AE++ AF +NA+ +A IG +++STDYVFD + TP E + Sbjct: 59 FTAVDAAEEQERQAFDVNAKAVQYLAVQCREIGARLVHVSTDYVFDEPADRDTPCPEDAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + + +Y+I+RTAW+Y G+ F +M RLA E ++VV D Sbjct: 119 PAPAGAYGRTKLAGEWALQAQGKDYLIVRTAWLYGAKGNCFPKTMARLAGEHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QFG PT + I ++ + GI+H T+ G SW F + I G Sbjct: 179 QFGQPTWTRDLTDLIWRLVEA------KAPTGIYHGTS-SGKTSWYGFTQEIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI----STWKEGVRNILVN 289 + V + T +P A RPA+S L L I S WK +L + Sbjct: 229 RNPAMVVPVATADFPRPAPRPAFSVLGHRALEAIGVAPIGQWDSRWKVAAGEVLAD 284 >gi|157373247|ref|YP_001471847.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] gi|157315621|gb|ABV34719.1| dTDP-4-dehydrorhamnose reductase [Shewanella sediminis HAW-EB3] Length = 289 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 105/292 (35%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L++G +GQ+AQ+L + +E + +G DI+L + S + D+IIN AAYT Sbjct: 7 KVLILGKSGQLAQALIANKPTPIECVALGHLDINLAVTGEIESAITTNRADIIINTAAYT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE EP +AF INA IAKAA + + I++STDYVFDG TP F +P+ Sbjct: 67 QVDLAESEPSLAFEINALAVENIAKAARNTNVHLIHLSTDYVFDGKQSTPYTIFDTPHPI 126 Query: 122 NIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 NIYG SKL GE+ + +RT+ VYS +G+NF+ +MLRL +E+ EI V+ DQ Sbjct: 127 NIYGASKLTGEKALRQCMPVGSTTVRTSSVYSQYGNNFVKTMLRLMREKSEIKVISDQIS 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG-- 238 +PTSA ++AR + + SL ++H D G SW FA I + + G Sbjct: 187 SPTSAKELARFLWMLTEQ------ESLSPLYHWC-DSGKTSWYQFAVTIQQLALKYGKLE 239 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I +++Y A RP +S LD + + + W+E + +++ + Sbjct: 240 KAISIIPISSQEYGAAALRPPFSQLDIGQSQALLHSKP--WQENLESLIKRL 289 >gi|96667|pir||S23348 hypothetical protein 5.2 - Salmonella choleraesuis gi|431939|emb|CAA43073.1| dTDP-6-deoxy-L-mannose dehydrogenase [Salmonella enterica] Length = 248 Score = 271 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 99/245 (40%), Positives = 145/245 (59%), Gaps = 5/245 (2%) Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVI+N AA+TAVDKAE EPE+A +NA AIAKAA+ G ++ STDYVF G Sbjct: 1 KLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGT 60 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E T+PLN+YGK+KLAGE+ + ++I RT+WVY+ G+NF +MLRLAK Sbjct: 61 GDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAK 120 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER+ +SV+ DQ+G PT A +A + + + G++H+ A GG +W D+A Sbjct: 121 ERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVA--GLYHLVA-GGTTTWHDYAA 177 Query: 228 YIFWESAERGGPYS--KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +F E+ + G + ++ + T YPT A RP S L+ K ++ + W+ GV+ Sbjct: 178 LVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKR 237 Query: 286 ILVNI 290 +L + Sbjct: 238 MLTEM 242 >gi|260495065|ref|ZP_05815194.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_33] gi|260197508|gb|EEW95026.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_33] Length = 298 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 142/307 (46%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNGDFLRAYIKTMNQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ + Sbjct: 120 STGYIEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R ++++ A RP +S L C K+ + I +WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGVSIPSWKDA 288 Query: 283 VRNILVN 289 + L Sbjct: 289 IDRYLKE 295 >gi|91793900|ref|YP_563551.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] gi|91715902|gb|ABE55828.1| dTDP-4-dehydrorhamnose reductase [Shewanella denitrificans OS217] Length = 292 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 147/290 (50%), Gaps = 12/290 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L++G GQ+ Q+L + D+ +I + R +D+ + +P +IIN A +T Sbjct: 10 VLILGAKGQVGQALLASKPADINVIALSRKALDITNVPKLGQCLQALTPQIIINAAGFTQ 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 V+ AE E E+A SIN +A+ A G I++S+DYVFDG +P NP+N Sbjct: 70 VELAEQERELATSINGAAVSELARLAKQQGARLIHLSSDYVFDGNKHSPYLCTDSPNPIN 129 Query: 123 IYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 YG++K GE + ++ + I+RT+W+Y G +F+ SML L + + +SVV DQ+G+ Sbjct: 130 HYGQTKRQGERGILAHNDTKLTIVRTSWLYGGQGRHFVDSMLNLMRTKETLSVVADQYGS 189 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--GP 239 PT L +A I + H S I+H + D G SW +FA I ++ G Sbjct: 190 PTYVLGLANFIWSLRHV------KSFSPIYHWS-DSGVCSWFEFAVEIQRQALLLGIVKQ 242 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I ++ Y + +RPAYS L C ++ W+ + L+N Sbjct: 243 PIPIIPISSECYSSIVNRPAYSALACDDSIEICLVKP--WQTQLTQYLLN 290 >gi|89889757|ref|ZP_01201268.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BBFL7] gi|89518030|gb|EAS20686.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium BBFL7] Length = 278 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 15/288 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G NG + ++ ++ ++D+ + + P IIN AAYT Sbjct: 3 KVIITGANGMLGTAIKKALSAQ-DVYAFSSNELDITCSQQLHKKIAAIQPHYIINCAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE E E A+ INA +A+ AD I+ STDYVF+G + TP T+P+ Sbjct: 62 AVDLAETEQEKAYRINALAVQKMAQIADQYDATLIHFSTDYVFNGDAATPYTSNQETDPI 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 NIYG SKLAGE+ ++ + I R +W+Y+ G NF + E+++V Q G+ Sbjct: 122 NIYGASKLAGEKAISQVNGKHYIFRISWLYAAHGKNF--FNWVAGTDLEELNIVDSQTGS 179 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSAL +A I + N+D + G++H T + G ++W FA+ I + + G + Sbjct: 180 PTSALDVANFINHLL-----NNDPANYGVYHFT-NQGEMTWYAFAKAI-NQKLDLGKNIN 232 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V ++ T A RPAYS +DC + + I++ + G+ ++ Sbjct: 233 AV-----AEFKTIAKRPAYSVMDCGETQRVFDYEITSVENGLDEVVRK 275 >gi|256028658|ref|ZP_05442492.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] gi|289766571|ref|ZP_06525949.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] gi|289718126|gb|EFD82138.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. D11] Length = 298 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNGDFLRAYIKTMNQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ + Sbjct: 120 STGYIEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R ++++ A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + L Sbjct: 289 IDRYLKE 295 >gi|89056333|ref|YP_511784.1| dTDP-4-dehydrorhamnose reductase [Jannaschia sp. CCS1] gi|88865882|gb|ABD56759.1| dTDP-4-dehydrorhamnose reductase [Jannaschia sp. CCS1] Length = 281 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 111/290 (38%), Positives = 154/290 (53%), Gaps = 12/290 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L G GQ+AQ L+ + + +GR + DL P+ A + IIN AAY Sbjct: 1 MSLLAFGQTGQVAQELARLG-----VRTLGRAEADLSNPQACADVIAASDATAIINAAAY 55 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A +INA+ A+A A + IP ++ISTDYVFDG P P Sbjct: 56 TAVDRAEEEEALAHTINADAPAAMAVACKAKNIPLVHISTDYVFDGQGTQSFRPSDPVAP 115 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L YG++KLAGE+ V + Y +LRT+WV+S G+NF+ +MLRL +R +++V DQ G Sbjct: 116 LGAYGRTKLAGEDAVRASGATYGVLRTSWVFSAHGANFVKTMLRLGADRDALTIVADQVG 175 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA IA A + +A L G +H + VSWADFA IF E+ Sbjct: 176 GPTSARAIAWACVTVADAL--QGAPEKSGTYHFSG-APDVSWADFARAIFAEAD----LN 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDC+ + W+ + + L +I Sbjct: 229 VAVTDIPSSDYPTPAVRPLNSRLDCAATEAAFGVPRPDWRADLGDALADI 278 >gi|218885248|ref|YP_002434569.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756202|gb|ACL07101.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 293 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV+G G + Q+L + + + + GR D+++L ASF P VI N A Sbjct: 6 KALVLGGRTGLLGQALVRVLRESGWDALPTGRDDVNVLDSGALASFIERAEPAVIFNTVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ E A +N + +A+ + ++ STD+VF G TP + Sbjct: 66 WTQVDLAEEREEDATRLNRQLPTCLARMVRGTPMHLVHFSTDFVFSGRKGTPYTPEDTPD 125 Query: 120 PLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE+ V N ++RT+W++ NF+ +L + ++ E VV DQ Sbjct: 126 PASVYGATKLAGEQAVLQQCPDNACVVRTSWLFGPGRRNFVKVILDICHDKGEARVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT L +A +++A GIFH+ A+ G SW + A E+ G Sbjct: 186 IGSPTYTLDLAAGSVKLAELRAT-------GIFHV-ANAGQASWCELA----SEAVNLAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV+ I ++ YP KA RP +S LD ++ I W + +R+ + Sbjct: 234 LPCKVHAIPSRDYPQKAQRPPFSVLDTARFTQMTGITPRPWPQALRDYI 282 >gi|33591367|ref|NP_879011.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis Tohama I] gi|33571009|emb|CAE40488.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis Tohama I] gi|332380768|gb|AEE65615.1| dTDP-4-dehydrorhamnose reductase [Bordetella pertussis CS] Length = 298 Score = 270 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 7/294 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M L++G GQI +L + + + R DL A+ +++P ++IN AAY Sbjct: 1 MNILLLGRTGQIGDALLAHPPAWARLAALDRRQADLRDLGRLAAVLDAYAPRILINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE EPE+A INA+ +A A ++ STDYVFDG E +P Sbjct: 61 TEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYSTDYVFDGKRARAYRETDAAHP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN YG+SKLAGE+ +A+ ++ILRT+WVY+ G+NF+ ++LRLA+ R E+SVV DQ G Sbjct: 121 LNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVKTILRLARTRAELSVVADQHG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--- 237 P A +IA Q G++H++A GG VSW A +I + G Sbjct: 181 APIWAGRIAAVTWQAIDAHRRRRLPD--GLWHLSA-GGHVSWHGLACHIVARARRAGLAL 237 Query: 238 -GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + QYP A RPA S LDC L + + W+ + ++ + Sbjct: 238 SLDPAHIRPVTAAQYPLPAPRPANSRLDCGALRDALEPELPDWQVDLDAVVDAL 291 >gi|257126877|ref|YP_003164991.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia buccalis C-1013-b] gi|257050816|gb|ACV40000.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia buccalis C-1013-b] Length = 284 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPA 58 MK L+ G+NGQ+ + + +E I ++D+ K+ FF + IIN A Sbjct: 1 MKILLTGSNGQLGRDFQKLFDSLKIEYIATDYQELDITSDKNLEKFFEKNNDFTHIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VDKAE + F +N + +A+ + I + STD+VFDG E Sbjct: 61 AYNDVDKAEID-NKVFLLNEQAPQKLAEFSKKISAIFVTYSTDFVFDGKKEKDYIEDDTP 119 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P++ YG +K GE+ ++RT+WV+ +NF ++ +K R ++++V DQ Sbjct: 120 TPVSNYGLAKANGEKLTLEAYEKSFVIRTSWVFGKANNNFNTQVINWSKTRDKLNIVDDQ 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PT + +A ++ T G++H+T + G S D A+Y+ + +G Sbjct: 180 ISVPTYSKDLAEFSWKLIQ-------TGQFGLYHITNN-GTASKYDQAKYVLEKIGWKGK 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + T+ + A RP +S L K+ +I WK G+ L + Sbjct: 232 LGTT----KTEDFNLPAKRPHFSKLSSEKVEKLLGEKIPDWKSGIDRYLEEM 279 >gi|237743315|ref|ZP_04573796.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 7_1] gi|229433094|gb|EEO43306.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 7_1] Length = 298 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKNEVDITNGDFLRAYIKTMNQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ +NF+ + Sbjct: 120 STGYIEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSRIYIVRTSWVFGKGNTNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R ++++ A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEEFNLLAERPKFSKLSCKKIKEKLGMSIPNWKDA 288 Query: 283 VRNILVN 289 + L Sbjct: 289 IDRYLKE 295 >gi|222099009|ref|YP_002533577.1| Putative dTDP-4-dehydrorhamnose reductase [Thermotoga neapolitana DSM 4359] gi|221571399|gb|ACM22211.1| Putative dTDP-4-dehydrorhamnose reductase [Thermotoga neapolitana DSM 4359] Length = 283 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 15/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPA 58 M L+ G NGQ+ ++ + + ++ I + ++D+ + F IIN A Sbjct: 1 MLVLITGANGQLGRAFQELFKEQGIDFIAATKEELDITNLQQIREFVRKNEGITHIINCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AY VD+AE + + A+ +N G +A ++ IG ++ STDYVF G +P + + Sbjct: 61 AYNKVDEAERDWKTAYLVNGIGPKNLAIVSNEIGAELVHYSTDYVFSGKKGSPYTIYDTS 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P+N YG+SK+ GE V S++N Y ++RT+WV+ + F+ +L +K+ + + +V D+ Sbjct: 121 DPINKYGESKVLGERFVMSFSNRYYLIRTSWVFGDGMN-FVRKVLEWSKKSKVLRIVDDE 179 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +PT A +A+A ++ G++H+T + G S ++AE+I E G Sbjct: 180 VSSPTYAPDLAKATWELIKLKA-------YGLYHIT-NSGYCSRYEWAEFILNEIGWDG- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ R + + A RP +S LD L +++ +WK + + Sbjct: 231 ---ELKRAKQEDFNLPAKRPKFSVLDGFGLREFTGMKMESWKRRTTEFIEKL 279 >gi|318042940|ref|ZP_07974896.1| dTDP-4-dehydrorhamnose reductase [Synechococcus sp. CB0101] Length = 299 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 100/305 (32%), Positives = 149/305 (48%), Gaps = 23/305 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-----EIIRVGRPDIDLLKPKD------FASFFLSF 49 MK ++ G GQ+ Q+L + E+I R + D + + Sbjct: 1 MKVILTGGAGQLGQALRRSASAAIGGRAMELITTTRSGGEGAIALDLADAAACRALVEEY 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD +IN AYTAVDKAE EPE+A ++NA+ GA+A+A S G + +STD+VF+G Sbjct: 61 QPDWVINAGAYTAVDKAESEPELAHAVNADAPGALAEALASTGGRLLQVSTDFVFNGAQG 120 Query: 110 TPIDEFSPTNPLNIYG--KSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 +P P +PL +YG K+ A + +LRT+WVY G NFLL+MLRL Sbjct: 121 SPYRPDQPVDPLGVYGASKAAGEAAAVAALPADRLCLLRTSWVYGPVGKNFLLTMLRLMA 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ER ++ VV DQ G PT+ +A A + + H +D G SW DFA Sbjct: 181 ERDQLGVVADQVGCPTATAGLAGACWAVLQQGVCG--------MHHWSDAGAASWYDFAV 232 Query: 228 YIFWESAERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I + G +++ I T YPT A RP+YS LDC+ + W+ ++ Sbjct: 233 AIAELGQDAGLLTNPARIQPITTADYPTPAQRPSYSLLDCTATREALQLPPLHWRAALQR 292 Query: 286 ILVNI 290 ++ ++ Sbjct: 293 VISDV 297 >gi|227875200|ref|ZP_03993342.1| dTDP-sugar reductase [Mobiluncus mulieris ATCC 35243] gi|227844105|gb|EEJ54272.1| dTDP-sugar reductase [Mobiluncus mulieris ATCC 35243] Length = 286 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 19/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G G + Q + + ++ E+ + RP +DL S DV++N AA Sbjct: 1 MRWIVLGAKGMLGQDVVELLQSKNQEVQSLDRPQVDLTLFDSLRSQVRDA--DVVVNCAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPIDEFSP 117 +TAVD AE++ AF +NA+ +A IG +++STDYVFD + TP E + Sbjct: 59 FTAVDAAEEQERQAFDVNAKAVQYLAVQCREIGARLVHVSTDYVFDEPADRDTPCPEDAL 118 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P YG++KLAGE + + +Y+I+RTAW+Y G+ F +M RLA ++VV D Sbjct: 119 PAPAGAYGRTKLAGEWALQAQGKDYLIVRTAWLYGAKGNCFPKTMARLAGGHDRLTVVAD 178 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QFG PT + I ++ + GI+H T+ G SW F + I G Sbjct: 179 QFGQPTWTRDLTDLIWRLVEA------KAPTGIYHGTS-SGKTSWYGFTQEIVR---SLG 228 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI----STWKEGVRNILVN 289 + V + T +P A RPA+S L L I S WK +L + Sbjct: 229 RNPAMVVPVATADFPRPAPRPAFSVLGHRALEAIGVAPIGQWDSRWKVAAGEVLAD 284 >gi|332286407|ref|YP_004418318.1| dTDP-4-dehydrorhamnose reductase [Pusillimonas sp. T7-7] gi|330430360|gb|AEC21694.1| dTDP-4-dehydrorhamnose reductase [Pusillimonas sp. T7-7] Length = 307 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 101/298 (33%), Positives = 147/298 (49%), Gaps = 27/298 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +GQ+ + L C ++ + R +D+ + + PD IIN AAY Sbjct: 1 MKVLLTGADGQLGRCLQDRCPAHWRLLALNRSRLDITDSQAVSRRVALEQPDWIINAAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE + E AFS+N +GA +A+AA G +++STDYVFDG R P E P Sbjct: 61 TAVDQAEGDAEQAFSVNVKGAAHLAEAAGRAGARLLHVSTDYVFDGQLRRPYTEQDAARP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-AKERRE-------- 171 LN YG+SKL GE V + ++LRT+ VYS +G+NF+ +MLRL A +E Sbjct: 121 LNEYGRSKLLGERAVLQSLSQALVLRTSGVYSEYGNNFVKTMLRLAAAAGKEVAPTKPEN 180 Query: 172 ----------ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + +V DQ PT A +A A+I + G++H +S Sbjct: 181 AAGQPSNAAVLRIVADQHICPTYAGDLADAVIDLMA-----CSPPASGLYHYCG-AMQLS 234 Query: 222 WADFAEYIFWESAERGGPYSK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 W +FA++IF + + +S + I Y A RPAYS L C K+ Sbjct: 235 WHEFAQHIFDCAQRQDASFSMPPLQAISASDYSAPAQRPAYSVLACEKIKGLGIWPKP 292 >gi|332519463|ref|ZP_08395930.1| dTDP-4-dehydrorhamnose reductase [Lacinutrix algicola 5H-3-7-4] gi|332045311|gb|EGI81504.1| dTDP-4-dehydrorhamnose reductase [Lacinutrix algicola 5H-3-7-4] Length = 285 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 LV G NGQ+AQ++ + ++ ++ V + D++L F + + IN A Sbjct: 4 NVLVTGANGQLAQTIKELYQKNKDNIKFTFVAKSDLELTNHNQVDKLFSAQVFNYCINCA 63 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYT V++AED +AF++NAE +A + I+ISTDYVF+G + P E T Sbjct: 64 AYTNVEQAEDSKTLAFNVNAEAVKNLATICKANSTTLIHISTDYVFNGEKKQPYKETDNT 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YG SKL GE + + ++Y I+RT+W+YS FG NF ++ KE+ + + + Sbjct: 124 NPLNNYGASKLKGEAYIPQFIDSYFIIRTSWLYSKFGKNFYKTISNKIKEQTNLKITTAE 183 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 GTPTS + +A AI + S G++H + + G +W +FA+ I Sbjct: 184 TGTPTSCVDLANAIYFLIA-----SKNKNYGLYHFS-NLGQATWYEFAKEIALVMGHYNL 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 K+ + + TKA RP +S LD SK++ I WKE + N+ Sbjct: 238 D--KIQPV--DFFKTKAKRPQFSVLDKSKISTILPQEIPHWKEALNNLFK 283 >gi|34762799|ref|ZP_00143786.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887550|gb|EAA24633.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 297 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ NF+ + Sbjct: 120 STGYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKGNINFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|317124301|ref|YP_004098413.1| dTDP-4-dehydrorhamnose reductase [Intrasporangium calvum DSM 43043] gi|315588389|gb|ADU47686.1| dTDP-4-dehydrorhamnose reductase [Intrasporangium calvum DSM 43043] Length = 282 Score = 269 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 13/287 (4%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G +A+ L ++ + +G ++D+ + + D+++N AA+ Sbjct: 6 RVLVTGAGGMLARDLVPALRAAGHAVTALGADELDITGAPECLAAAAGH--DLVVNCAAF 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD+AE E +AF++NA GA +A+AA G ++ STDYVFDG + P P +P Sbjct: 64 ARVDEAEREEPLAFAVNALGAANVARAAAHAGARILHFSTDYVFDGQANRPYAAEHPPSP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ YG++KLAGE V + ++ ++RTAW+Y G NF+ +MLRLA+ER + VV DQ G Sbjct: 124 LSAYGRTKLAGEWAVRALCADHWVVRTAWLYGAGGPNFVGTMLRLAEERGTLDVVDDQRG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++++ + G +H T+ G +W A IF E R Sbjct: 184 QPTWTRDLAELVVRMVDA------RAPTGTYHGTS-SGETTWHGLARAIFEE---RRLDP 233 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V T +P A RPAY L L I W+E + L Sbjct: 234 HRVRPTSTDAFPRPAPRPAYGVLSHRSLEEAGIDPIRDWREALAEYL 280 >gi|171463074|ref|YP_001797187.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192612|gb|ACB43573.1| dTDP-4-dehydrorhamnose reductase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 317 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 25/313 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-----DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M LV G +GQ+ ++ S++ Q + +I +GR + DL K D + + P++II Sbjct: 1 MNVLVFGKDGQLGKAFSALIGQSSISANTQITYLGRAECDLSKEADVFAALKAAKPNLII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +AYTAVDKAE E ++AF++NA+ +A+ A ++ STDYVFDG E Sbjct: 61 NASAYTAVDKAETEVDLAFAVNAKAPEIMARYAAENDATLLHYSTDYVFDGSKDGLYMED 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN-----YVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P NPL +YGKSK AGEE + N + I RT+WVY G+ F+ +MLRLAK+R Sbjct: 121 DPRNPLGVYGKSKAAGEEAIEKVFANSSKGQFAIFRTSWVYGDGGN-FIRTMLRLAKDRE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E+ V+ DQ G PTSA +A+ + + + GI+H G +W A + Sbjct: 180 ELKVIHDQHGVPTSAEWLAQISLDLVLDQQGGLKVFPSGIYH-AIPAGETTWHGLASFAV 238 Query: 231 WESAERG----GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS--------- 277 + G + + I +YP A RP S +D SKL T + S Sbjct: 239 QVALNAGIELKAKPAAIKPILAVKYPLPAPRPMNSRMDRSKLRKTLENQGSMAKLGSIDE 298 Query: 278 TWKEGVRNILVNI 290 W V++ + + Sbjct: 299 PWSIAVQDYIQAL 311 >gi|120402727|ref|YP_952556.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1] gi|119955545|gb|ABM12550.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium vanbaalenii PYR-1] Length = 284 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 14/291 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G G + + L+ + +++ + D+ + DV++N AA+ Sbjct: 4 RIVISGAGGLVGRVLAGQARRAGRDVVALTSAQWDITDRAQAERVIAAG--DVVVNCAAF 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE EP+ A ++NA GAG +A+A G I++STDYVF G R P + T P Sbjct: 62 TKVDAAEAEPDRAHAVNAVGAGNVAQACARAGASLIHLSTDYVFSGSRRRPYEIDDETGP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQF 179 L++YG++KLAGE+ V + + ++RTAW+Y G++F M R A+ + VV DQ Sbjct: 122 LSVYGRTKLAGEQAVLAALPDAYVVRTAWIYEGGAGTDFAAVMRRAAQGDGTVEVVADQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + RA++QIA D +RG A+ G VS D A+ +F AE G Sbjct: 182 GSPTYVGDLCRALLQIA-------DGGVRGPVLHAANLGAVSRFDQAQAVF---AELGAD 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S+V + + ++P A RPAYS L K A + W++ + L + Sbjct: 232 PSRVRPVGSDRHPRPAPRPAYSALSPVKSAEAGLTPLRPWRDALAEALATV 282 >gi|218896254|ref|YP_002444665.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9842] gi|218545192|gb|ACK97586.1| dTDP-4-dehydrorhamnose reductase [Bacillus cereus G9842] Length = 237 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 95/245 (38%), Positives = 137/245 (55%), Gaps = 12/245 (4%) Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 P +II+ AAYT VD AE E ++A+ INA GA +A A+ +G +YISTDYVF Sbjct: 1 MVQEIKPHIIIHCAAYTKVDHAEKEQDLAYRINAIGARNVAVASQLVGAKLVYISTDYVF 60 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G DEF P+NIYG SK AGE+ V N Y I+RT+W+Y +G+NF+ +M+R Sbjct: 61 QGARPEGYDEFHSPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMMR 120 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 L KER EISVV DQ G+PT + I ++ H TSL G +H++ + G SW + Sbjct: 121 LGKERDEISVVADQVGSPTYVADLNIVINKLIH-------TSLYGTYHVS-NRGSCSWFE 172 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA+ IF + V + T+++ A RP YS + L +++ +W+EG+ Sbjct: 173 FAQKIFSYT----NMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLE 228 Query: 285 NILVN 289 + Sbjct: 229 RFFIE 233 >gi|294668986|ref|ZP_06734072.1| dTDP-4-dehydrorhamnose reductase [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308978|gb|EFE50221.1| dTDP-4-dehydrorhamnose reductase [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 287 Score = 268 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 95/292 (32%), Positives = 147/292 (50%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G+ GQ+ QS+ +D E+I +D+ + SF PD ++N AAY Sbjct: 1 MRILLTGSKGQLGQSIRKRLPEDWELIATDSKTLDITDHEAVLKMVESFQPDAVVNTAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AV KA ++ E F++NA G +A+AA S+G ++ISTDYVF G SR P E P NP Sbjct: 61 MAVGKAAEDVERVFAVNASGTRNLAQAAFSVGAKFVHISTDYVFGGGSRIPYSEIDPPNP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +Y +SKLAGE + + V++RT+WVYS +G NF+ ++L A E+ EI + D Sbjct: 121 KCVYARSKLAGELLALASEPDTVVVRTSWVYSEYGRNFIQNLLHQAAEQGEIRLSADNAA 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER--GG 238 PT A +A II++ +G+ H + S FA+ + AER Sbjct: 181 CPTYAGDLADVIIRLLQL-----PKFPQGLLHYCGNKAF-SDYAFAQAVLKAEAERNPAF 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + + P YS L+C K A W++ V ++L + Sbjct: 235 EMPQLVQASAAEMGKGGA-PLYSVLNCEK-ARALGFVQGDWQKSVPSVLAAL 284 >gi|219849996|ref|YP_002464429.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] gi|219544255|gb|ACL25993.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] Length = 282 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 17/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G NGQ+ ++L + + +++ +G ++L P + +V+I+ AAY Sbjct: 1 MRIAITGANGQLGRALIATLARHHDVVALGHDQLELSDPATVDQ-IANTRAEVVIHAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P +A+ +N G +A I +YIST+ VF G S P E PT P Sbjct: 60 TNVDGCARDPVLAYRVNGLGTRYVALGCRRIDAAMVYISTNEVFAGTSHRPYYEDDPTGP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREISVVCDQ 178 +N YG+SKLAGE++V + I+R AW++ NF+ ++LRLA + +V D+ Sbjct: 120 INPYGQSKLAGEQEVRFLVARHFIVRVAWLFGG-ERNFVQTVLRLAANPPNGVLRMVADE 178 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT A +A + ++ T G +H D G S +FA I ++ G Sbjct: 179 IGSPTYAGDVAAGLARLIT-------TDYYGTYHFVND-GICSRYEFAAEILRQA----G 226 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + I + + + P Y+ L I W+E V + L + Sbjct: 227 IDTPLLPIRLRDFQRDSTPPPYTPLANI-AGAALGITFRPWQEAVADYLERL 277 >gi|11095235|gb|AAG29801.1| dTDP-4-keto-6-deoxyhexose reductase [Streptomyces rishiriensis] Length = 288 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 13/286 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L + E ++ R D+D+ + + P I+N AA+ Sbjct: 4 RWLVTGAGGMLGRDLVRVLEALNEPVLAATRQDLDITDRFSVRAVVSRYRPTAIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A IN GA +A I +++STDYVFDG SR P E + T P Sbjct: 64 TRFHEAETSEAEAHLINGRGARELATICGDRSIRLVHLSTDYVFDGASRRPYAESAATGP 123 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++KLAGE+ V ++ I+RTAW+Y G+NFL M+RL + + + VV DQ+ Sbjct: 124 INAYGRTKLAGEQAVLELLPDDGTIVRTAWLYGRHGTNFLRKMVRLEQTHKTVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT ++ +A+ I+ + + G+FH T+ G +W DFA IF G Sbjct: 184 GQPTWSVDLAQQIVALVRH-------GASGVFHGTS-SGETTWYDFARMIFRL---LGAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++ + + Q RP Y+ L + I W + Sbjct: 233 PGRIRPVRSDQIAGGELRPRYTVLGHAAWREVGLTPIRHWSAALER 278 >gi|83859879|ref|ZP_00953399.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Oceanicaulis alexandrii HTCC2633] gi|83852238|gb|EAP90092.1| dTDP-6-deoxy-L-mannose-dehydrogenase [Oceanicaulis alexandrii HTCC2633] Length = 292 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 103/285 (36%), Positives = 154/285 (54%), Gaps = 10/285 (3%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G +GQ+A+SL++ +DV ++ GR DL P + P +IN AAYTA Sbjct: 10 LIFGKSGQLARSLAAQARCEDVSLLCAGRDIADLTIPGHARALIERLQPRFVINAAAYTA 69 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AEDE + +INA+ G +AKA S G I++STDYVF+G S TP E S +P+N Sbjct: 70 VDRAEDETLLCNAINADAPGEMAKACASQGSRFIHVSTDYVFNGESDTPYTEDSEPDPIN 129 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKL GE K + + I+RT+ V+S G +F +L LA R + +V DQ P Sbjct: 130 FYGQSKLEGELKALNSYDQTTIVRTSAVFSGLGDDFPCKILNLAASRETLRIVDDQITGP 189 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A ++AR + +A + S G+FH VSWA FA + G ++ Sbjct: 190 TPAAELARRLFALARS------PSAYGVFHCAGQ-PFVSWAGFAAAFLEQEGSAIG--TR 240 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + +++YPT+A RP S L +L + W++ + +L Sbjct: 241 VIPVSSEEYPTRARRPKRSRLGGDRLKEATGLHSPQWQQSLGLML 285 >gi|6018309|gb|AAF01815.1|AF187532_11 putative dTDP-4-dehydrorhamnose reductase [Streptomyces nogalater] Length = 291 Score = 268 bits (685), Expect = 7e-70, Method: Composition-based stats. Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 15/287 (5%) Query: 11 QIAQSLSSMCVQDV------EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 +A+ L++ + E + +GR +D+ + + F + P V++N AA+T VD Sbjct: 1 MLARHLTAALAETGRSRPAAEAVVLGRRALDITDGRAVDAAFAAHRPRVVVNCAAFTDVD 60 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIY 124 AE A +N G +A+ G+ I++STDYVF G +R+P E P +Y Sbjct: 61 GAESRWAEAMRVNGGGPRLLARRCARHGVRLIHVSTDYVFPGDTRSPYGESDAPGPRTVY 120 Query: 125 GKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G+SKLAGE V S + ++RTAW+Y G +F+ +ML A + + VV DQ+G PT Sbjct: 121 GRSKLAGERAVLSLLPDTGTVVRTAWLYGGQGRSFVRTMLERAPDDGHVDVVNDQWGQPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A +AR ++ +A + + RGIFH T + G +W + A +F + G +V Sbjct: 181 WAGDVARLLVTLARTPPDRA----RGIFHAT-NAGAATWYELAREVFRLA---GADPERV 232 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + T P A RPA + L + W+ +R + + Sbjct: 233 RPVATADRPGPAPRPACTVLGHDRWRLVGVAPPRDWRAALREAMRQL 279 >gi|262038045|ref|ZP_06011452.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia goodfellowii F0264] gi|261747937|gb|EEY35369.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia goodfellowii F0264] Length = 286 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 16/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINP 57 MK L+IG++GQ+ + + E I ++D+ K +FF D+ IIN Sbjct: 1 MKILLIGSDGQLGYEFKRLFDSLNKEYIATDYQNLDITDEKALNNFFTIHK-DITHIINC 59 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY VDKAE E + +N E +A+ + +I STD+VFDG P E Sbjct: 60 AAYNDVDKAESEDDKVRLLNTEAPKKLAEISKNINAVYTTYSTDFVFDGEKGKPYIEEDK 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 NPL Y +SK GE+KV + I+RT+W++ I +NF ++ +K + + VV D Sbjct: 120 INPLCKYAESKAEGEKKVFETYDKSFIIRTSWLFGIGNNNFSKQIINWSKIQDTLKVVDD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q PT + +A ++ T G++H++++ G S D A+YI + +G Sbjct: 180 QISAPTYSKDLALFSWKLIQ-------TRKYGMYHISSN-GVASKYDQAKYILDKIGWKG 231 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 K+ + T + A R YS LD K+ +I WK G+ L + Sbjct: 232 ----KLEKARTFDFKLPAKRSKYSKLDSGKIERLLGEKIPDWKNGIDRFLEEM 280 >gi|256846109|ref|ZP_05551567.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_36A2] gi|256719668|gb|EEU33223.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_36A2] Length = 298 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYSE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ T N I+RT+WV+ +NF+ + Sbjct: 120 STGYTEEDEPHPLSTYAKTKYEGELLVSQVTENPENTSKIYIVRTSWVFGKGNTNFIDKV 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ V DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKDELKVADDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R +++ A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|254303461|ref|ZP_04970819.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323653|gb|EDK88903.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 298 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 140/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFKELFDSMGEKYIATDKNEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VFDG Sbjct: 60 NCAAYNDVDKAETEKELCYKVNAEAPANLAMIASEIGATYITYSTDFVFDGMMTNYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE ++ N I+RT+WV+ NF+ + Sbjct: 120 STGYTEEDEPHPLSAYAKAKYEGELLISQIMENPKNTSRIYIVRTSWVFGKGSMNFVEKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + L+KE+ E+ VV DQ +PT + +A ++ E GI+H+T D G S Sbjct: 180 IELSKEKDELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHLTND-GIASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+YI + + +G + R ++ A RP +S L C K+ I I WK+ Sbjct: 233 YEEAQYILEKISWKGN----LIRAKREELGLLAERPKFSKLSCKKIKEKLGISIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|294784763|ref|ZP_06750051.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_27] gi|294486477|gb|EFG33839.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_27] Length = 298 Score = 267 bits (684), Expect = 9e-70, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ NF+ + Sbjct: 120 STGYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKENINFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R +++ A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|237742783|ref|ZP_04573264.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 4_1_13] gi|229430431|gb|EEO40643.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 4_1_13] Length = 298 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NGQ+ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGQLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKLNAEAPANLAMIASEIGATFITYSTDFVFNGLIEGYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ NF+ + Sbjct: 120 STGYTEEDEPHPLSTYAKTKYEGELLVSQVIENPENTSKIYIVRTSWVFGKGNINFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +K++ E+ VV DQ +PT + +A ++ E GI+H T D S Sbjct: 180 IEWSKQKNELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGIYHFTNDD-IASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+YI + + +G + R +++ A RP +S L C K+ + I WK+ Sbjct: 233 YDQAKYILEKISWKGN----LIRAKSEELGLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|163743495|ref|ZP_02150873.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis 2.10] gi|161383198|gb|EDQ07589.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis 2.10] Length = 282 Score = 267 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 119/288 (41%), Positives = 156/288 (54%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L++ +I+ + R DL P A + +P +IN AAYT Sbjct: 2 ILVFGKTGQVARELAA----HDDILCLSRDQADLTDPAACAEVIRTHAPAAVINAAAYTV 57 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE E E+A IN G +A+ ++GIP + +STDYVFDG +P P PLN Sbjct: 58 VDRAEAEEELATLINGTTPGVMAETCATLGIPFVTLSTDYVFDGKGSSPWHPDEPVAPLN 117 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SK GE V +VILRT+WV S GSNF+ +MLRL KER + VV DQ G P Sbjct: 118 AYGRSKQLGEAAVRLAGGAHVILRTSWVVSAHGSNFVKTMLRLGKERERMRVVADQIGAP 177 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A I+IA LI + + S G +H SWA A IF E+A Sbjct: 178 TPARAIAAACIEIARQLIADPEKS--GTYHFAGQ-PETSWAGVASEIFTEAA----IPCA 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W+ G+++IL ++ Sbjct: 231 VAEIPSSAYPTAAPRPLNSRLDCSTLERAFGITRPDWQAGLKDILKDL 278 >gi|126464815|ref|YP_001041791.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides ATCC 17029] gi|126106630|gb|ABN79155.1| dTDP-4-dehydrorhamnose reductase [Rhodobacter sphaeroides ATCC 17029] Length = 283 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 121/288 (42%), Positives = 163/288 (56%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L+ + +GR + DL P+ A PD IN AA+TA Sbjct: 2 ILVFGRTGQVARELARQAP---DARFLGRDEADLADPEACARAIREAKPDAAINAAAWTA 58 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE+E A +N E GA+A+A ++GIP + ISTDYVFDG P P PL Sbjct: 59 VDRAEEEEAPATVVNGEAPGAMARACAALGIPFVQISTDYVFDGSGTRPWQPGDPVGPLG 118 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKLAGEE V + + ILRT+WV+S G+NF+ +MLRL R ++VVCDQ G P Sbjct: 119 AYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGP 178 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A + +A L D S G +H++ G VSWADFA IF ++ Sbjct: 179 TPAADIAAACLAMARGLAARPDLS--GTYHLSG-GPDVSWADFAREIFRQAE----LDCL 231 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YP KAHRPA S +DCS LA + W++G+ +L ++ Sbjct: 232 VADIASADYPQKAHRPANSRMDCSDLAR-FGLTRPDWRQGLARVLADL 278 >gi|170781062|ref|YP_001709394.1| putative dTDP-sugar reductase [Clavibacter michiganensis subsp. sepedonicus] gi|169155630|emb|CAQ00748.1| putative dTDP-sugar reductase [Clavibacter michiganensis subsp. sepedonicus] Length = 284 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 14/285 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G G + Q L ++ R ++D+ + DV++N AAYT Sbjct: 3 RILVTGGRGMLGQDLVPALAA-HDVTAPARAELDITDEAAVRAAVAGH--DVVVNLAAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE+ + A +INA GAG +A+AA G +++STDYVFDG + TP E +P P+ Sbjct: 60 AVDAAEEHEDEARAINATGAGVLARAAAEAGARIVHVSTDYVFDGSATTPYPEDAPHAPV 119 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K GE V + + I+RTAW+Y G +F +MLRLA +SVV DQ G Sbjct: 120 SAYGRTKAEGERLVLDGHPDGASIVRTAWLYGAGGPSFPSTMLRLAASHDTVSVVDDQRG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I+++ + G+FH TA G +W A+ +F E+ G Sbjct: 180 QPTWTVDLAARIVELVDA------GAPAGVFHGTA-TGETTWFGLAQAVFAEA---GLDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + + A RPAYS L + W+E + + Sbjct: 230 ERVRPTDSASFVRPAPRPAYSMLGHDAWGRVGLAPLRDWREALSD 274 >gi|296329268|ref|ZP_06871769.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296153624|gb|EFG94441.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 307 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKANAEAPANLAMVASEIGATYITYSTDFVFNGMTTNYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ G NF+ + Sbjct: 120 STGYTEEDEAHPLSAYAKAKYEGELLVSQIIENPENTSKIYIVRTSWVFGEGGMNFVEKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + L+KE+ E+ VV DQ +PT + +A ++ E G++H+T D G VS Sbjct: 180 IELSKEKDELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGVYHLTND-GIVSK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ Sbjct: 233 YEEAQYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|127514633|ref|YP_001095830.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126639928|gb|ABO25571.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 309 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 93/314 (29%), Positives = 151/314 (48%), Gaps = 33/314 (10%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LVIG +GQ++Q+L++ ++ +GR +D+ + ++IN + Sbjct: 1 MKPILVIGRHGQVSQALNATQPDCYQVDYLGREALDVRDSQAIKRLLEQQGYGLVINASG 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--------- 110 YT VD AE + + AF++N A+A+ I I++S+DYV+DG+ Sbjct: 61 YTQVDAAETDSQAAFALNHLAVKALAEHCGKRSIRLIHLSSDYVYDGVFDGVFDGVFDEA 120 Query: 111 -----------PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNF 158 P NPL+ YG+SK GE+ Y + I+RT+W+YS FG NF Sbjct: 121 FKGELDKQHCQPYRPTDTPNPLSRYGESKWHGEQAALEYGLGHAFIVRTSWLYSPFGHNF 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + +ML L ++ + + +V DQ+GTPTSA+ + + I Q+ T I+H + D G Sbjct: 181 VKTMLTLMRQGKPLKIVDDQWGTPTSAITLGQFIWQLIQV------TKPEPIYHWS-DLG 233 Query: 219 PVSWADFAEYIFWESAERGG--PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 SW +FA I + G + + I T++Y A RP YS LD S Sbjct: 234 VTSWYEFARQISDSAYALGLLDKPANISPISTQEYGAPAPRPHYSALDTSSSQAIL--PA 291 Query: 277 STWKEGVRNILVNI 290 W++ + +L + Sbjct: 292 KRWQDNLIQVLQQL 305 >gi|294138869|ref|YP_003554847.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] gi|293325338|dbj|BAJ00069.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] Length = 288 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 159/292 (54%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG +GQ+AQ+L + + + +GR D+D+ + D+IIN AAYT Sbjct: 6 RTLIIGKHGQLAQALIASKPRYINATAIGRDDVDIGSLDSILAAIEQTHADLIINTAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE ++AFS+N +GAG IA AA I++STDYVF+G ++ + Sbjct: 66 QVDMAESRRDLAFSVNRDGAGNIALAAKLTQTRLIHLSTDYVFNGQKNKAYCVDDESSAI 125 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SK AGE+ V A+ I+R++W+YS FGSNF+ +ML+L E+ E+SV+ DQ Sbjct: 126 NVYGTSKQAGEQAVIAANYEKACIVRSSWLYSQFGSNFVKTMLKLITEQPELSVINDQIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA ++ I + + + +L I+H + D G SW +FA I + G Sbjct: 186 CPTSASELGLFIWNL------SQEENLAPIYHWS-DAGTASWYEFALEIQGIALSLGKLD 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + I + Q+P+ A RP +S LD + + W+E + +L + Sbjct: 239 TRIPIKPISSSQFPSAASRPKFSLLDITASRQI--MTAKPWQENLAAVLKQL 288 >gi|148272189|ref|YP_001221750.1| putative dTDP-4-dehydrorhamnose reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830119|emb|CAN01048.1| putative dTDP-4-dehydrorhamnose reductase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 284 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 14/285 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G+ G + Q L ++ R ++D+ DV++N AAYT Sbjct: 3 RILVTGSRGMLGQDLLPALAA-HDVTAPARAELDITDEVAVRRAVEGH--DVVVNLAAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE+ + A +INA GAG +A+AA G I++STDYVFDG + +P E +P P+ Sbjct: 60 AVDAAEEHEDEARAINATGAGVLARAAAEAGARIIHVSTDYVFDGSATSPYPEDAPHAPV 119 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++K GE V + + ++RTAW+Y GS+F +MLRLA +SVV DQ G Sbjct: 120 SAYGRTKAEGERLVLDGHPDGASVVRTAWLYGAGGSSFPSTMLRLAASHDTVSVVDDQRG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A I+++ + G+FH TA G +W A +F + G Sbjct: 180 QPTWTVDLAARIVELVDA------GAPAGVFHGTA-TGETTWFGLARAVFTAA---GLDP 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +V + + A RPAYS L A + W+E + + Sbjct: 230 ERVRPTDSASFVRPAPRPAYSVLGHGGWARVGLPPLRDWREALSD 274 >gi|296395056|ref|YP_003659940.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985] gi|296182203|gb|ADG99109.1| dTDP-4-dehydrorhamnose reductase [Segniliparus rotundus DSM 44985] Length = 294 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 135/300 (45%), Gaps = 25/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + +V G GQ+ + + + ++ + R +D+ A P DV++N AA Sbjct: 7 RLVVTGAGGQVGSRVVQIAAEHRYNVVGLSRAQLDICDEGAVAETL---RPGDVVVNCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--------P 111 T VD AE +PE A INAE G +A+A +G I++STDYVF G P Sbjct: 64 QTQVDAAEADPEGAHRINAEAVGNLARACARVGARFIHVSTDYVFAGQEEGWFSARLARP 123 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAKER 169 + P+ +YG+SKLAGE + V++RT+WVY+ G +F+ + A+ Sbjct: 124 YEADDEPRPIQVYGESKLAGERLAFQHNPRSVVVRTSWVYTGERHGRDFVSTAREQAESG 183 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + V DQ G+PT + +A ++++A E G+ + GG S D A + Sbjct: 184 SAMRAVTDQVGSPTRCVDLAYGLLELAWQGGEG------GLLQFSNTGG-CSRHDLARAV 236 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 F E G V + + A RP YS L + W++ +R+ L + Sbjct: 237 FEE---LGADPDLVRPCMSWELERPAARPPYSVLSVASWMQRGLRPPRAWRDALRDALRH 293 >gi|163740060|ref|ZP_02147464.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis BS107] gi|161386691|gb|EDQ11056.1| dTDP-4-dehydrorhamnose reductase [Phaeobacter gallaeciensis BS107] Length = 282 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 117/288 (40%), Positives = 154/288 (53%), Gaps = 11/288 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G GQ+A+ L++ D + + R DL P A + +P +IN AAYT Sbjct: 2 ILVFGKTGQVARELAA----DETVTCLSRDQADLTDPAACAEVIRAHAPAAVINAAAYTV 57 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE E ++A IN G +A+ ++GIP + +STDYVFDG +P P PLN Sbjct: 58 VDRAEAEEDLATLINGTTPGVMAETCATLGIPFVTLSTDYVFDGKGSSPWHPDEPVAPLN 117 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SK GE V +VILRT+WV S GSNF+ +MLRL KER + VV DQ G P Sbjct: 118 AYGRSKQLGEAAVRLTGGTHVILRTSWVVSAHGSNFVKTMLRLGKERERMRVVADQIGAP 177 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T A IA A I+IA LI + + S G +H SWA A IF E+ Sbjct: 178 TPARAIAAACIEIARQLIADPEKS--GTYHFAGQ-PETSWAGVATEIFTEAE----IPCA 230 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + YPT A RP S LDCS L I W+ G+++IL ++ Sbjct: 231 VAEIPSSAYPTAAPRPLNSRLDCSTLERVFGITRPDWQAGLKDILKDL 278 >gi|283851960|ref|ZP_06369236.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] gi|283572684|gb|EFC20668.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] Length = 293 Score = 266 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 101/289 (34%), Positives = 146/289 (50%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + + L+ + + R ++D + + FS + N A Sbjct: 9 RAIVLGGKTGLLGRPLTQALAEAGFAVRPTTRTELDPFDTEAVSRALADFSATHLFNTVA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ E A+ +N + +A+A D+ ++ STD+VF G TP E PT Sbjct: 69 YTAVDAAEDDTEAAYRLNRDLPAGLARACDAARAMLVHYSTDFVFRGDKATPYTEEDPTG 128 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE+ + Y ILRTAW++ NF+ ++L LA R E+ VV DQ Sbjct: 129 PESVYGASKLAGEQAILETGLLRYQILRTAWLFGPGKKNFVATILGLAATREELRVVGDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PTS L +A ++A T GIFH A G SW + A E+ G Sbjct: 189 IGSPTSTLDLAGWSAELAA-------TGKSGIFH-AAGSGHASWCELA----AEAVSAAG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + QYP KA RPAYS L +KLA T W + VR+ + Sbjct: 237 LPCRVVSIPSSQYPQKAKRPAYSVLSTAKLAGTIGREPRPWVQAVRDYV 285 >gi|309791917|ref|ZP_07686399.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] gi|308226035|gb|EFO79781.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] Length = 328 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 16/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + ++ G GQ+ +L+ + E+ V R DI+L P+ + + D+II+PAAYT Sbjct: 51 RIVITGAQGQLGSTLARILADGHELTLVDRDDIELSSPEAIDQLVATSA-DMIIHPAAYT 109 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD +PE A+ +NA G +A A +G P IYIST+ VF G + E+ T P+ Sbjct: 110 DVDGCARDPEWAYRVNALGTKYVAMACRRLGSPMIYISTNEVFAGDAGRAYMEYDQTGPI 169 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE--ISVVCDQF 179 N YG+SKLAGE V ++ I+R AW++ NF+ ++LRLA + +V D+ Sbjct: 170 NAYGRSKLAGEVAVREILRDFYIVRIAWLFGG-ERNFVRTVLRLAANPPSGGLRMVDDEI 228 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A AI+++ T G +H+ + G S FA I ++ G Sbjct: 229 GNPTYCPDLAAAIVRLIA-------TGAYGTYHLV-NSGACSRYAFASEILRQA---GHH 277 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I Y + P YS L + A I + W+E + L + Sbjct: 278 DLRITPIRLADYQRASTPPPYSPL-LNIAAADLGITLRPWQEALAEYLTTL 327 >gi|31794446|ref|NP_856939.1| dTDP-rhamnose modification protein RmlD [Mycobacterium bovis AF2122/97] gi|121639155|ref|YP_979379.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|215428749|ref|ZP_03426668.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis T92] gi|215432231|ref|ZP_03430150.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis EAS054] gi|219559325|ref|ZP_03538401.1| putative dTDP-rhamnose modification protein rmlD [Mycobacterium tuberculosis T17] gi|224991648|ref|YP_002646337.1| putative dTDP-rhamnose modification protein [Mycobacterium bovis BCG str. Tokyo 172] gi|260188315|ref|ZP_05765789.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis CPHL_A] gi|260202428|ref|ZP_05769919.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis T46] gi|260206618|ref|ZP_05774109.1| putative dTDP-rhamnose modification protein [Mycobacterium tuberculosis K85] gi|289444848|ref|ZP_06434592.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis T46] gi|289448955|ref|ZP_06438699.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CPHL_A] gi|289571494|ref|ZP_06451721.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T17] gi|289575986|ref|ZP_06456213.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis K85] gi|289751960|ref|ZP_06511338.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T92] gi|289755389|ref|ZP_06514767.1| dTDP-rhamnose modification protein RmlD [Mycobacterium tuberculosis EAS054] gi|31620042|emb|CAD95386.1| POSSIBLE DTDP-RHAMNOSE MODIFICATION PROTEIN RMLD [Mycobacterium bovis AF2122/97] gi|121494803|emb|CAL73284.1| Possible dTDP-rhamnose modification protein rmlD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774763|dbj|BAH27569.1| putative dTDP-rhamnose modification protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289417767|gb|EFD15007.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis T46] gi|289421913|gb|EFD19114.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CPHL_A] gi|289540417|gb|EFD44995.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis K85] gi|289545248|gb|EFD48896.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T17] gi|289692547|gb|EFD59976.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T92] gi|289695976|gb|EFD63405.1| dTDP-rhamnose modification protein RmlD [Mycobacterium tuberculosis EAS054] Length = 304 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHG--DVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFDG P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTYVADLAEA-------LLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A RP+YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRPSYSALSSRQWALAGLTPLRHWR 279 >gi|7329196|gb|AAF59936.1| 4-ketoreductase [Streptomyces antibioticus] Length = 294 Score = 265 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 88/291 (30%), Positives = 137/291 (47%), Gaps = 11/291 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G + + L ++ E + +G +D+ +P + P +++N AA Sbjct: 1 MRWLITGAAGMLGRELVRRLAENEEDVAALGHDHLDVTRPFAVRAALAEHRPGIVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AE + A +NAE +A+A G +++STDYVF G +RTP E PT Sbjct: 61 YTAVDDAETDEAAAALLNAEAPRLLAEACAPHGARLVHLSTDYVFPGDARTPYAEDHPTA 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++K GE+ V + +LRTAW+Y G +F+ +M+ I VV DQ Sbjct: 121 PRSAYGRTKRDGEQAVLTALPTATVLRTAWLYGRTGRSFVRTMIEREARGGAIDVVADQC 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A II + + + GI H T + G +W D A+ +F Sbjct: 181 GQPTWTGDLADRIIAVGRH------PGVHGILHAT-NAGSATWYDLAQEVFRLLDA---D 230 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + A RPAYS L + T + W+ +R +I Sbjct: 231 PGRVRPTTGAAFRRPAPRPAYSVLGHDRWRGTGLAPLRDWRSALREAFPDI 281 >gi|266620908|ref|ZP_06113843.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288867425|gb|EFC99723.1| dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 286 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 141/289 (48%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NG++ + ++ + VE++ +D+ PK + P I+N A Sbjct: 6 KVWICGANGRVGRKMTELLENTPVELLLTDLDAVDITDPKAVRDYAGMNRPHFIVNCAGL 65 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V E+ E AF +NA GA ++ AA I +STD VFDG +TP EF NP Sbjct: 66 TDVAMCEENKEEAFKVNALGARNLSVAARMGKARMIQLSTDDVFDGSGQTPYTEFDTPNP 125 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V + N ++I+R++W++ S F +L+LA E + I DQ Sbjct: 126 QTVYGKSKLAGENFVKEFCNRHIIVRSSWIFGEGSSYF-SKILKLAGEGKTIYAASDQTA 184 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A ++A +IE D++ G++H+T G S +FA+ I S G Sbjct: 185 APTGAS-------ELAEKIIELMDSAPDGLYHVTGQ-GSCSRFEFAQEIVRLS----GHK 232 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V + A RP+YS LD L + ++ W+ + + + Sbjct: 233 AEVVPVAAADDKLTAMRPSYSVLDNMMLRMSGIAQLPEWRLMLERFMRD 281 >gi|302560673|ref|ZP_07313015.1| dTDP-4-dehydrorhamnose reductase [Streptomyces griseoflavus Tu4000] gi|302478291|gb|EFL41384.1| dTDP-4-dehydrorhamnose reductase [Streptomyces griseoflavus Tu4000] Length = 306 Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 138/290 (47%), Gaps = 8/290 (2%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G G + Q L+ + + R +DL P V++N AA+T Sbjct: 14 WLVTGAGGMLGQDVLARLAKAGERATALDRAALDLTDAAAVRRALERHRPAVVVNCAAWT 73 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE A ++N +G +A A G +++STDYVF G + P E +PT P Sbjct: 74 AVDDAETREAEALAVNGDGPARLADACARTGAVLLHVSTDYVFAGDATAPYAEDAPTAPR 133 Query: 122 NIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++KLAGE V + + ++RTAW+Y G+NF+ +M+RL +R ++ VV DQ G Sbjct: 134 SAYGRTKLAGERAVLNTLPDRGYVVRTAWLYGTGGANFVRTMIRLEGQREKLDVVDDQRG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT + +A ++ A + T+ G++H T+ G +W IF G Sbjct: 194 QPTWSADLAGLLL--ALGRGALAGTAPPGVYHGTS-SGETTWYGLTREIFRL---LGADP 247 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V+ ++ + A RPAYS L + A + W+ + I Sbjct: 248 DRVHPTTSEAFVRPAPRPAYSVLGHDRFAAAGVAPLRDWRAALAEAFPRI 297 >gi|258404444|ref|YP_003197186.1| dTDP-4-dehydrorhamnose reductase [Desulfohalobium retbaense DSM 5692] gi|257796671|gb|ACV67608.1| dTDP-4-dehydrorhamnose reductase [Desulfohalobium retbaense DSM 5692] Length = 293 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 14/283 (4%) Query: 7 GNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDK 65 G G + Q+L + + +GR D+D+ + P + N AYT VD Sbjct: 15 GKRGLLGQALVQTLQEQGWRVCALGREDVDVDSQEALTDLLSRLRPGAVFNTVAYTQVDA 74 Query: 66 AEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYG 125 AE + + A +N + +A S IP ++ STD+VF G RTP P +YG Sbjct: 75 AETDVQNARLLNQSFPCRLGRALPSPEIPVVHFSTDFVFGGDQRTPYTPLDTPRPGTVYG 134 Query: 126 KSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 K+KL GE+ + I+RTAW++ NF+ ML+L+ E + VV DQ G+PT Sbjct: 135 KTKLEGEKALLQLDLRRLFIVRTAWLFGPGKENFVSKMLKLSAEHSRLRVVHDQIGSPTY 194 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 L +A + + + + G++H+ A+ G SW + A E+ G +V Sbjct: 195 TLDLAAYTLHLL-------EKTPAGLYHI-ANSGRASWCELA----SEALALYGSSCQVE 242 Query: 245 RIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I +YP +A RPAYS LD + + I+ W + +R+ + Sbjct: 243 AITAAEYPQQAVRPAYSVLDNTAFSQATGIKPRPWPQALRDYI 285 >gi|206900982|ref|YP_002250211.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] gi|206740085|gb|ACI19143.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus thermophilum H-6-12] Length = 281 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 13/286 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G G + Q +D E+I + DI+L S PD++I+PAA Sbjct: 4 RILITGAKGFLGQYFVKEF-EDEEVIPITHQDINLEDKNAIEK-ITSLKPDLVIHPAAIR 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + D E++PE A+ +NA G +A A + IP IYISTDYVF G TP EF P NP+ Sbjct: 62 SPDICEEDPEKAWKVNAVGTKHVAIACSLLDIPLIYISTDYVFSGGKDTPYTEFYPPNPI 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YGK+KL GE + + I+RT++V+ +G+N L + KE +EI + F + Sbjct: 122 NLYGKTKLYGEIFTKEFCKKHFIIRTSYVFGEYGNNALTQIYNSLKEGKEIKLSNYHFAS 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T A + R + ++ S T+L G +H+ + G ++ DFA + + G Sbjct: 182 CTYAKDLVRKVKEL-------SFTNLYGTYHIV-NKGIITRYDFACKVAEIA---GFSKE 230 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV + ++ + A RP YS L L + + ++E +R + Sbjct: 231 KVIPLNSETFKAPAKRPLYSVLRNYMLEIYNMDDLPYYEESLRKAM 276 >gi|257452250|ref|ZP_05617549.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 3_1_5R] gi|317058793|ref|ZP_07923278.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium sp. 3_1_5R] gi|313684469|gb|EFS21304.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium sp. 3_1_5R] Length = 470 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 139/288 (48%), Gaps = 14/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L++G NGQ+ ++ + + V +D+ K F +IN AAY Sbjct: 193 RVLILGGNGQLGKAFQKFIQKKKIRYQAVDIDTLDITDEKKCREFLEKNFFHCVINCAAY 252 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VDKAE E E ++NA+ IP I STD+VFDG P E NP Sbjct: 253 TDVDKAELELERCKTVNADAIKLWIDLCRERQIPFITFSTDFVFDGTGDEPYSEEKDPNP 312 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YGK+KL GE+ Y +++R++W++S G+NF +L +K+++EI +V DQ Sbjct: 313 ISWYGKTKLEGEKNALCY-EKALVIRSSWLFSNEGTNFCKKVLTWSKQKKEIHIVDDQIS 371 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT + + + + G++HM++ G S D A+Y+ + G Sbjct: 372 TPTYVRDLVYFTWLL-------YEKACFGLYHMSS-SGECSKYDLAKYLLSSISWNGI-- 421 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + R ++++ +A RP YS L C KL + WK+ V++ L Sbjct: 422 --LERASSEEFENRAERPKYSKLYCMKLQREVGKPLPYWKKAVQHFLK 467 >gi|217966753|ref|YP_002352259.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724] gi|217335852|gb|ACK41645.1| dTDP-4-dehydrorhamnose reductase [Dictyoglomus turgidum DSM 6724] Length = 278 Score = 264 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 89/286 (31%), Positives = 144/286 (50%), Gaps = 13/286 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G G + Q QD ++I + DI++ PD++I+PAA Sbjct: 1 MKVLITGAGGFLGQYFVKEF-QDHDVIPLTHKDINIEDKNTIEKII-ELKPDLVIHPAAI 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + D E +P++A+ +NA G IA A + IP IYISTDYVF G +P EF NP Sbjct: 59 RSPDICERDPDLAWKVNALGTKHIAIACSILDIPLIYISTDYVFSGDKNSPYTEFDTPNP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG++KL GE V + Y I+RT++V+ +G+N + R KE +EI + F Sbjct: 119 INVYGRTKLQGELFVKEFCEKYFIIRTSYVFGEYGNNAFTQIYRSLKEGKEIYLSNYHFA 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 + T A + R + ++ S T L G +H+ + G ++ DFA + + P Sbjct: 179 SCTYAGDLVRKVKEL-------SFTKLYGTYHIV-NKGIITRYDFAWKV---AEIFNLPK 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 K+ ++ ++ + A RP YS L L H + ++E ++ I Sbjct: 228 DKIIKLTSENFNQPAPRPLYSVLRNYVLELYHMDDMEHYEEILKKI 273 >gi|260448860|gb|ACX39282.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli DH1] gi|315136674|dbj|BAJ43833.1| dTDP-4-dehydrorhamnose reductase [Escherichia coli DH1] Length = 285 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 101/255 (39%), Positives = 139/255 (54%), Gaps = 10/255 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID----LLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I D P+ A S PD+I+N Sbjct: 1 MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE A INA AIAKAA+ +G I+ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T PLN+YG++KLAGE+ + Y ++I RT+WVY+ G+NF +MLRLAKER E++V+ Sbjct: 121 ATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT A +A + D + G++H+ A G +W D+A +F E+ + Sbjct: 181 DQFGAPTGAELLADCTAHAIRVALNKPDVA--GLYHLVA-SGTTTWYDYAALVFEEARKA 237 Query: 237 GGPYSKVYRIFTKQY 251 G P ++ + QY Sbjct: 238 GIP---LHSTSSTQY 249 >gi|296123526|ref|YP_003631304.1| dTDP-4-dehydrorhamnose reductase [Planctomyces limnophilus DSM 3776] gi|296015866|gb|ADG69105.1| dTDP-4-dehydrorhamnose reductase [Planctomyces limnophilus DSM 3776] Length = 302 Score = 264 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 95/300 (31%), Positives = 149/300 (49%), Gaps = 18/300 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++G GQ+A L + D + +GR D+D+ + P ++IN AA Sbjct: 5 VAILGGQGQLAFELQCLLAPDSGRSLSILGREDLDVTNAAQVDAVLSGIHPQIVINCAAQ 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 T VD AE E FSINA GAG I + + +YISTD+VF P E Sbjct: 65 TQVDVAESTSENTFSINATGAGHIGRWCAANRAKLVYISTDHVFGQTIDRAHARPWRETD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLAKERREI 172 P+++Y +SKLAGE+ + V++RT +Y + NF+ +MLRLA++R + Sbjct: 125 QPQPVSVYARSKLAGEQATLEACPHSVVVRTCGLYGQRPAKGKGNFVQTMLRLAQQRPVL 184 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPVSWADFAEYIF 230 VV DQ+ TP+SA +A+AI + + + + I+H+T + G +WA A IF Sbjct: 185 KVVDDQWCTPSSAQDVAQAIRSLLVDPDAFNPKTNLTSRIWHIT-NTGSTTWAQLAREIF 243 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V I T ++ AHRP YS LD S+ ++ + +W+E + L + Sbjct: 244 S----LQGLTTEVIPITTAEFNAPAHRPGYSVLDTSRFHQSYG-ALPSWQEALATYLQRL 298 >gi|19705019|ref|NP_602514.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712929|gb|AAL93813.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 298 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + ++D+ ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFKELFDSIGEKYIATDKDEVDITNGDFLRAYIKTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VDKAE E E+ + NAE +A A IG I STD+VF+G Sbjct: 60 NCAAYNDVDKAETEKELCYKANAEAPANLAMIASEIGATYITYSTDFVFNGMTTNYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ G NF+ + Sbjct: 120 STGYTEEDEAHPLSAYAKAKYEGELLVSQIIENPENTSRIYIVRTSWVFGKGGMNFVEKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + L+KE+ E+ VV DQ +PT + +A ++ E G++H+T D VS Sbjct: 180 IELSKEKDELKVVDDQVSSPTYSKDLAYFSWELIKKGCE------SGVYHLTNDS-IVSK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+YI + + +G + R ++ + A RP +S L C K+ + I WK+ Sbjct: 233 YEEAQYILEKISWKGN----LIRAKSEDFNLLAERPKFSKLSCKKIKEKLGVSIPNWKDA 288 Query: 283 VRNILVN 289 + Sbjct: 289 IDRYFKE 295 >gi|260890984|ref|ZP_05902247.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia hofstadii F0254] gi|260859011|gb|EEX73511.1| dTDP-4-dehydrorhamnose reductase [Leptotrichia hofstadii F0254] Length = 293 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 15/291 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFS-PDVIINPAA 59 K L+ G++GQ+ + ++ + ++++ + +FF + +IN AA Sbjct: 11 KILLTGSDGQLGHDFQKLFDNLNINYVATDHKELNVSNDNELENFFEKNNDFTHVINCAA 70 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE AF +N +A+ + + + STD+VFDG P E N Sbjct: 71 YNDVDKAEIN-NNAFLLNQRAPQKLAEFSKQMNAVFVTYSTDFVFDGKKAAPYIEEDVPN 129 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ Y SK GE+ V + + +RT+W++ I G NF ++ +K R ++S+V DQ Sbjct: 130 PLSRYAISKHEGEKAVLAAWHKSFAIRTSWLFGINGENFNTQVINWSKTRDKLSIVDDQI 189 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + +A ++ T G++H+T + G S + A+Y+ + +G Sbjct: 190 SAPTYSKDLAEFSWKLIQ-------TEKYGLYHIT-NSGIASKYEQAKYVLEKIGWKGIL 241 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + TK + A RP +S L K+ +I WK G+ L + Sbjct: 242 ETA----KTKDFNLPAKRPYFSKLSSEKVEKLLGKKIPDWKNGIDRYLEEM 288 >gi|256397292|ref|YP_003118856.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM 44928] gi|256363518|gb|ACU77015.1| dTDP-4-dehydrorhamnose reductase [Catenulispora acidiphila DSM 44928] Length = 301 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 14/282 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + L ++ + ++ + R ++D+ A+ D+++N AA Sbjct: 16 RWLVTGAGGMLGTDLVALLKAEPAAQVTALTRAELDVTDASAVAAAVAGH--DIVVNAAA 73 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N G ++A A + G + +STDYVFDG P E++ T+ Sbjct: 74 WTDVDGAETHEAQATAVNGGGVSSLASACAATGARLLTVSTDYVFDGKGEAPYGEYAATD 133 Query: 120 PLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N YG+SKL GE V + ++RTAW+Y G NF+ +MLRLA ER + VV DQ Sbjct: 134 PINAYGRSKLVGERAVLAVLPETGYVVRTAWLYGAHGPNFVRTMLRLAGERETLDVVDDQ 193 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A +I +A + + GI+H TA G SW A F E+ G Sbjct: 194 IGQPTWTGALAGQLIALA-----QASQAPAGIYHGTA-SGQTSWFGLARAAFEEA---GL 244 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + ++ A RP YS L + A + W+ Sbjct: 245 DPERVRPTTSDKFVRPAERPKYSVLGHDRWAEAGLPELGDWR 286 >gi|196232434|ref|ZP_03131287.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] gi|196223506|gb|EDY18023.1| dTDP-4-dehydrorhamnose reductase [Chthoniobacter flavus Ellin428] Length = 296 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 11/293 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K +++G+ G++ +L + E ++ R +DL + DV++N AA Sbjct: 4 KIVIVGSGGRLGAALLREWRERGEEVVGFNRELLDLGDFSAIRERLDALEFDVLVNCAAQ 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+ E EPE AF +N+ G A+A CI+ISTDYVFDG P E P Sbjct: 64 TNVDRCECEPEEAFRVNSGGVAALADVCTRKKARCIHISTDYVFDGTKEKPYTEDDEPRP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG+SKL+GE + + ++ ++I+R +WV+ ++F+ +++ A + + + D+ Sbjct: 124 ISKYGESKLSGERCLQAVSDRHLIVRVSWVFGPDRASFVDQIIQRALTQDRVEAIADKIS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT L AR + + + G+ H+ + G SW + ++ +A G P Sbjct: 184 VPTYTLDAARLLWPLVEQ------PEVGGVMHLC-NAGECSWQQYGQHALNCAAALGMPL 236 Query: 241 S--KVYRIFTKQY-PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + + A RP Y+ L K I W E V + I Sbjct: 237 CTQHVEPLKLAEMKNFVAARPRYTPLATKKFTGITGITPRPWTEAVEEYVRTI 289 >gi|307318654|ref|ZP_07598087.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] gi|306895681|gb|EFN26434.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti AK83] Length = 275 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 116/266 (43%), Positives = 164/266 (61%), Gaps = 1/266 (0%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA+ Sbjct: 2 EVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGAV 61 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++I Sbjct: 62 AEAAACLEVPIVHISTDYVFDGSKPGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHLI 121 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 LRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 122 LRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSRQ 181 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 + G++H+ G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 182 DAAFGLYHLAG-SGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSLS 240 Query: 265 CSKLANTHNIRISTWKEGVRNILVNI 290 +K T + W+ V + + Sbjct: 241 SAKFNATFGQAMPAWQGSVERTVRRL 266 >gi|307303495|ref|ZP_07583249.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti BL225C] gi|306902886|gb|EFN33478.1| dTDP-4-dehydrorhamnose reductase [Sinorhizobium meliloti BL225C] Length = 275 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 116/266 (43%), Positives = 164/266 (61%), Gaps = 1/266 (0%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA+ Sbjct: 2 EVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGAV 61 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++I Sbjct: 62 AEAAACLEVPIVHISTDYVFDGSKPGSYAEGDTPAPLSVYGASKLAGESAVAEATPRHLI 121 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 LRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 122 LRTGWVYSPFGKNFVKTVLRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSRQ 181 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 + G++H+ G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 182 DAAFGLYHLAG-SGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSLS 240 Query: 265 CSKLANTHNIRISTWKEGVRNILVNI 290 +K T + W+ V + + Sbjct: 241 SAKFNATFGQAMPAWQGSVERTVRRL 266 >gi|24940614|gb|AAN65241.1|AF329398_31 dTDP-4-keto-6-deoxyhexose reductase [Streptomyces roseochromogenes subsp. oscitans] Length = 288 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 13/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L + E ++ V R D+D+ + + P I+N AA+ Sbjct: 4 RWLVTGAAGMLGRDLVGVLQGLNESVVAVTRQDLDITDRFSVRAVVSRYQPTTIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A IN G +A I +++STDYVFDG S P E + T+P Sbjct: 64 TRFPEAEVSESEALLINGRGVRELASICSDRSIRLVHLSTDYVFDGTSCQPYAESAATSP 123 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++KLAGE+ V ++ I+RTAW+Y G+NF+ M+RL + R+ + VV DQ+ Sbjct: 124 INAYGRTKLAGEQAVLELLPDDGTIVRTAWLYGRHGTNFIRKMVRLEQMRKTVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A+ I+ + G+FH T+ G +W D A +F G Sbjct: 184 GQPTWTVDLAQQIVALVRQ-------GASGVFHGTS-SGETTWYDIARMVFRL---LGAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 ++ + + Q RP Y+ L + I W + Sbjct: 233 PGRIRPVRSDQVAGGELRPRYTVLGHAAWREVGLTPIRHWATAL 276 >gi|15004825|ref|NP_149285.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC 824] gi|14994437|gb|AAK76867.1|AE001438_120 dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum ATCC 824] gi|325511269|gb|ADZ22904.1| dTDP-4-keto-L-rhamnose reductase [Clostridium acetobutylicum EA 2018] Length = 239 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 84/249 (33%), Positives = 131/249 (52%), Gaps = 12/249 (4%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV++N AAYT VD E + AF +NA GA +A AA+ IG ++IS+D Sbjct: 2 VKSVISKIRPDVVVNAAAYTNVDACETNEKKAFEVNAFGAKNLAIAAEEIGAKLVHISSD 61 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 YVF G TP + +P ++YGKSK G++ V +++ Y I+R AWVY G NF+ + Sbjct: 62 YVFSGEGNTPFKDEDKASPQSVYGKSKKMGDDFVKEFSSKYFIVRPAWVYGYKGKNFVYT 121 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 ++ LAKE+ ++VV DQ G PT+ I I+++ T G+++ + G S Sbjct: 122 IMELAKEKEVVTVVNDQRGNPTNVEDIVYHILKLIV-------TDKYGVYNCSGH-GECS 173 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 W DFA I S S + + +Y +A RP+YS L+ L+ + WK+ Sbjct: 174 WYDFACEIIKLS----NIPSVIKPCSSNEYKRQAKRPSYSSLENKNLSLAVGDDMRYWKD 229 Query: 282 GVRNILVNI 290 ++ + + Sbjct: 230 ALKVFIEKV 238 >gi|294783374|ref|ZP_06748698.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 1_1_41FAA] gi|294480252|gb|EFG28029.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 1_1_41FAA] Length = 297 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + +ID+ ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFKELLDSIGEKYIASDKDEIDITNGDFLRAYVQTMHQNYKVDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VD+AE E E+ + +NAE +A A IG I S+D+VF+G Sbjct: 60 NCAAYNYVDRAETEKELCYKLNAEAPATLANIAAEIGANYITYSSDFVFNGLLTSYLYGD 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ N I+RT+WV+ NF+ + Sbjct: 120 TTGYTEEDEPHPLSTYAKAKYEGELLVSQVIENPEITSKIFIVRTSWVFGKASMNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + L+KE+ E+ VV DQ +PT + +A ++ + EN GI+H T D G S Sbjct: 180 IELSKEKDELKVVDDQVSSPTYSKDLAYYSWELLKSSAEN------GIYHFTND-GIASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+YI + + +G + + + A RP +S L C K+ I I WK+ Sbjct: 233 YEEAKYILDKISWQGN----LIAVKREDLGLPAERPKFSKLSCKKIKEKLGITIPDWKDA 288 Query: 283 VRNILVN 289 + + Sbjct: 289 IDRYFKD 295 >gi|1890604|emb|CAB01952.1| ExpA10 [Sinorhizobium meliloti] Length = 275 Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 116/266 (43%), Positives = 164/266 (61%), Gaps = 1/266 (0%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 E++ +GRP +DL +P PD++++ AAYTAVD+AE EPE AF++NA GAGA+ Sbjct: 2 EVVTIGRPHLDLTEPATILPAIERCRPDLVVSAAAYTAVDQAESEPEAAFAVNAFGAGAV 61 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI 144 A+AA + +P ++ISTDYVFDG E PL++YG SKLAGE VA T ++I Sbjct: 62 AEAAACLEVPIVHISTDYVFDGSKPRSYAEGDTPAPLSVYGASKLAGESAVAEATPRHLI 121 Query: 145 LRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 LRT WVYS FG NF+ ++LRLA+ER +I+VV DQ G P+SA+ +A AI+ I+ L ++ Sbjct: 122 LRTGWVYSPFGKNFVKTILRLAEEREDIAVVADQRGNPSSAIDLADAILDISARLTKSRQ 181 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 + G++H+ G VS ADFA + S GGP++ V I T +PT A RPA S L Sbjct: 182 DAAFGLYHLAG-SGVVSRADFARHALAASRAAGGPWAHVRDIATGGFPTPASRPANSSLS 240 Query: 265 CSKLANTHNIRISTWKEGVRNILVNI 290 +K T + W+ V + + Sbjct: 241 SAKFNATFGQAMPAWQGSVERTVRRL 266 >gi|163846004|ref|YP_001634048.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222523729|ref|YP_002568199.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] gi|163667293|gb|ABY33659.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222447608|gb|ACM51874.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] Length = 284 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 17/292 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ + G NGQ+ ++L + ++ +G ++L P + DV+I+ AAY Sbjct: 1 MRIAITGANGQLGRALIATLADQHTLVPLGHDQLELTDPVTVEQ-IAATDADVVIHAAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P +A+ +N G +A I +YIST+ VF G +R P E P Sbjct: 60 TNVDGCARDPGLAYRVNGLGTRYVALGCRRIDAALVYISTNEVFAGDARRPYFEDDPPRA 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE--ISVVCDQ 178 +N YG+SKLAGE+ V S + I+R AW++ NF+ ++LRLA + +V D+ Sbjct: 120 INPYGQSKLAGEQAVRSLVARHFIVRVAWLFGG-ERNFVRTVLRLAANPPAHGLRMVADE 178 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT +A + ++ T G +H D G S +FA I R G Sbjct: 179 IGSPTYTFDVAAGLARLIT-------TDYYGTYHFVND-GICSRYEFAAEIL----RRVG 226 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I + + P Y+ L + I W++ + + L + Sbjct: 227 LNIPLQPIRLCDFQRDSTPPPYTPLAN-LAGASLGITFRPWQDALADYLGRL 277 >gi|117925414|ref|YP_866031.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] gi|117609170|gb|ABK44625.1| dTDP-4-dehydrorhamnose reductase [Magnetococcus sp. MC-1] Length = 300 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 11/295 (3%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 + G GQ+A++L + GR DL +P P ++I+ AA T Sbjct: 6 VWITGAQGQMARALYQQTPPGCAVRCFGRQQWDLSQPAKLE-LPRQNLPQLLIHTAAMTD 64 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD AE +P +AF++N +A+ GI + +STDY+FDG + P NPL+ Sbjct: 65 VDGAEKDPHLAFALNGTATERLAQWCADYGIAMLALSTDYLFDGQATRPYRPDDRVNPLS 124 Query: 123 IYGKSKLAGEEKVAS-YTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERRE-ISVVCDQF 179 +YG+SK GE+ + + I+RTAW+Y G NFL +MLRL + + +V DQ+ Sbjct: 125 VYGRSKQVGEQAIQEILGDQAAIIRTAWLYDGGSGRNFLTTMLRLMGQGTTPLRIVEDQW 184 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT+ +AR + +A L++ + G++H + G SW +FA+ I + E G Sbjct: 185 GAPTACDALARVVWALAQQLLDQAHGG--GLYHWSCQ-GQSSWFEFAQTIQQIALEMGLL 241 Query: 240 --YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI--RISTWKEGVRNILVNI 290 ++ I QY A RPAYS LD + L + W++ +R ++ + Sbjct: 242 QHPVELQPISAVQYGAPAPRPAYSVLDSTLLVQRLGTVAQPPPWQQALRAVMQAM 296 >gi|302524296|ref|ZP_07276638.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. AA4] gi|302433191|gb|EFL05007.1| dTDP-4-dehydrorhamnose reductase [Streptomyces sp. AA4] Length = 294 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 15/297 (5%) Query: 1 MKCLVI--GNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFF--------LSFS 50 M+ V+ G +GQ+ + L + + E++ ++D+ + + + Sbjct: 1 MRLAVLVPGGSGQLGRDLVNTAGPETEVLAPSSAELDITAAGQVIAAVGELAERAAAAGA 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 V+IN AAYTAVD AE + AF++N +G +A A S +P I++STDYVF G Sbjct: 61 VPVVINAAAYTAVDAAETDEARAFAVNVDGPRVLAAACTSRRVPLIHVSTDYVFPGDGDR 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P + P N YG++K AGE+ V + ++RT+WVY G+NF+ +M RL ER Sbjct: 121 PYEVDDALGPKNAYGRTKAAGEDAVLGSGASAWVVRTSWVYGKTGANFVETMRRLESERD 180 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++SVV DQ G PT + +AR + ++A + + + + H T GG SW FA IF Sbjct: 181 QLSVVDDQIGAPTWSADLARGLWELAGAIAAGQGPAGK-VLHCTG-GGETSWYGFARAIF 238 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 E G +V T+++P A RPAYS L + + W+ + + L Sbjct: 239 EEI---GADPDRVKPCTTEEFPRPAARPAYSLLSNASWREAGLTPLRDWRTALNSYL 292 >gi|319789560|ref|YP_004151193.1| dTDP-4-dehydrorhamnose reductase [Thermovibrio ammonificans HB-1] gi|317114062|gb|ADU96552.1| dTDP-4-dehydrorhamnose reductase [Thermovibrio ammonificans HB-1] Length = 281 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV+G +GQ+ + + + + D+ K +F P VI+N AAY Sbjct: 1 MKFLVLGASGQLGSEFALRL--GNSCVALSSRECDVTNLKAVLEAVETFRPTVILNCAAY 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 VD AE + AF +N G +A AA GI ++ STDYVF+G P E + Sbjct: 59 NLVDSAESDFVSAFKVNGLGVRNVAHAASRFGIFVVHFSTDYVFNGKKEEGPYTENDSPD 118 Query: 120 PLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N+YG+SKL GEE + + ++I R +W+Y NF+ +L A ER + V CD+ Sbjct: 119 PVNVYGRSKLFGEEFLREELPHRHLIFRVSWLYGRGRQNFVWKLLNWAGERPYLKVACDE 178 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 F PTS + + + G+FH+ + G S ++A E+ + G Sbjct: 179 FSVPTSTRTVVDYTLLALKKGLT-------GLFHLV-NTGFTSRFEWAR----EALKTLG 226 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + ++ A RP +S + +L+ ++ I W E +R+ L Sbjct: 227 LKKFVRPAYMAEFNLPAKRPGFSPMSNGRLSGELSVEIPHWLEELRSFL 275 >gi|315445612|ref|YP_004078491.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|315263915|gb|ADU00657.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 287 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 14/291 (4%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +++G G + + L+ Q +++ + D D+ +P + D+++N AA Sbjct: 4 RIVIVGAGGLVGRVLAGQAGRQGRDVVALTSSDWDITEPGSGERHLAAG--DIVVNCAAI 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE PE + ++NA GAG +A A +G I++STDYVF G S P D P Sbjct: 62 TNVDLAEAVPERSRAVNAVGAGNVALACARVGATLIHLSTDYVFGGDSTRPYDIDDEPAP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQF 179 L++YG++KLAGE V + + ++RT+W++ G++F M R A +I +V DQ Sbjct: 122 LSVYGRTKLAGEHAVLAALPDAHVVRTSWIFEGGNGADFAAVMRRAAAGSGDIEMVADQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+PT + A++QIA D +RG A+ G S D A+ +F AE G Sbjct: 182 GSPTYVGDLCAALLQIA-------DGGVRGPLLHAANAGSASRFDQAQAVF---AELGAD 231 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V+ I ++P A RP+YS L +K + W+ + L + Sbjct: 232 PGRVHPISGDRHPRPAPRPSYSALAATKSTAAGLTPLRPWRAALAEALATM 282 >gi|156741680|ref|YP_001431809.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] gi|156233008|gb|ABU57791.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] Length = 280 Score = 261 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 14/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V G GQ+ ++L + EII + D+DL + + + +I+PAAY Sbjct: 1 MRIAVTGAGGQLGKALQRVLSDAHEIIPLNHADLDLERSDCVQALVAT-DAQCVIHPAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P+ A+ +NA G +A A ++ P +Y+ST+ VFDG + +P E+ P Sbjct: 60 THVDGCARDPDRAYRVNALGTRYVALACQALDAPLVYVSTNEVFDGTATSPYLEYDRPAP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SK AGE+ V + I+R AW++ NF+ ++LRLA ER EI++V D+ G Sbjct: 120 INPYGFSKWAGEQVVRELLRRFYIVRVAWLFGG-ERNFVRTVLRLAHERNEIAMVADEIG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A A AI ++ +T G +H+ + G S +FA + Sbjct: 179 SPTYAPDAAAAIARLI-------ETPYYGTYHLVNE-GSCSRYEFAAATLRLAER---TD 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I +Y + P Y+ L A IR+ W+E + + Sbjct: 228 VTLRPISLAEYQRASRVPPYTPLRNV-AAADLGIRLRPWEEALTEYV 273 >gi|5814319|gb|AAD52187.1|AF144879_26 unknown [Leptospira interrogans] Length = 306 Score = 261 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 146/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFS 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S +Y I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLDETRKIFGVV-PHWREDLTLCLKEL 298 >gi|15610402|ref|NP_217783.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium tuberculosis H37Rv] gi|15842856|ref|NP_337893.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis CDC1551] gi|148663129|ref|YP_001284652.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis H37Ra] gi|148824468|ref|YP_001289222.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis F11] gi|167967903|ref|ZP_02550180.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis H37Ra] gi|215405279|ref|ZP_03417460.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 02_1987] gi|215413144|ref|ZP_03421845.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|215447571|ref|ZP_03434323.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis T85] gi|218755052|ref|ZP_03533848.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|253800309|ref|YP_003033310.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 1435] gi|254233876|ref|ZP_04927201.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis C] gi|254365889|ref|ZP_04981934.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis str. Haarlem] gi|289555544|ref|ZP_06444754.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 605] gi|289747084|ref|ZP_06506462.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis 02_1987] gi|289759407|ref|ZP_06518785.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis T85] gi|289763455|ref|ZP_06522833.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|294993793|ref|ZP_06799484.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis 210] gi|297635920|ref|ZP_06953700.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN 4207] gi|297732917|ref|ZP_06962035.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN R506] gi|298526742|ref|ZP_07014151.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|306777595|ref|ZP_07415932.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu001] gi|306782317|ref|ZP_07420654.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu002] gi|306786139|ref|ZP_07424461.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu003] gi|306790507|ref|ZP_07428829.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu004] gi|306795028|ref|ZP_07433330.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu005] gi|306799226|ref|ZP_07437528.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu006] gi|306805074|ref|ZP_07441742.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu008] gi|306809261|ref|ZP_07445929.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu007] gi|306969363|ref|ZP_07482024.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu009] gi|306973715|ref|ZP_07486376.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu010] gi|307081424|ref|ZP_07490594.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu011] gi|307086028|ref|ZP_07495141.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu012] gi|313660249|ref|ZP_07817129.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis KZN V2475] gi|81671924|sp|P96871|RMLD_MYCTU RecName: Full=dTDP-4-dehydrorhamnose reductase; AltName: Full=dTDP-4-keto-L-rhamnose reductase; AltName: Full=dTDP-6-deoxy-L-lyxo-4-hexulose reductase; AltName: Full=dTDP-6-deoxy-L-mannose dehydrogenase; AltName: Full=dTDP-L-rhamnose synthase gi|1877321|emb|CAB07093.1| dTDP-6-DEOXY-L-LYXO-4-HEXULOSE REDUCTASE RMLD (dTDP-RHAMNOSE MODIFICATION PROTEIN) (dTDP-RHAMNOSE BIOSYNTHESIS PROTEIN) (dTDP-RHAMNOSE SYNTHASE) [Mycobacterium tuberculosis H37Rv] gi|13883186|gb|AAK47707.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis CDC1551] gi|124599405|gb|EAY58509.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis C] gi|134151402|gb|EBA43447.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis str. Haarlem] gi|148507281|gb|ABQ75090.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium tuberculosis H37Ra] gi|148722995|gb|ABR07620.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis F11] gi|253321812|gb|ACT26415.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 1435] gi|289440176|gb|EFD22669.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 605] gi|289687612|gb|EFD55100.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis 02_1987] gi|289710961|gb|EFD74977.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis GM 1503] gi|289714971|gb|EFD78983.1| dtdp-6-deoxy-l-lyxo-4-hexulose reductase rmld [Mycobacterium tuberculosis T85] gi|298496536|gb|EFI31830.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis 94_M4241A] gi|308214136|gb|EFO73535.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu001] gi|308325067|gb|EFP13918.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu002] gi|308329288|gb|EFP18139.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu003] gi|308333119|gb|EFP21970.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu004] gi|308336806|gb|EFP25657.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu005] gi|308340640|gb|EFP29491.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu006] gi|308344373|gb|EFP33224.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu007] gi|308348377|gb|EFP37228.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu008] gi|308353214|gb|EFP42065.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu009] gi|308356954|gb|EFP45805.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu010] gi|308360955|gb|EFP49806.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu011] gi|308364495|gb|EFP53346.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis SUMu012] gi|323718135|gb|EGB27317.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis CDC1551A] gi|326902506|gb|EGE49439.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis W-148] gi|328460043|gb|AEB05466.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis KZN 4207] Length = 304 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRHG--DVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFDG P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTYVADLAEA-------LLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A R +YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWR 279 >gi|45657973|ref|YP_002059.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|1666506|gb|AAB47841.1| RmlD [Leptospira interrogans] gi|45601214|gb|AAS70696.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 306 Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 146/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFANSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFS 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S +Y I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGVV-PHWREDLTLCLKEL 298 >gi|295691437|ref|YP_003595130.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] gi|295433340|gb|ADG12512.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] Length = 293 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 6/286 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A ++ + + E++ + R + DL P + D+++N AA+ Sbjct: 1 MKILQFGGTGQVATAVQAAAREGTEVVALSRAECDLEDPSAIRRAIQAAQCDLVLNTAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE P+ AF++NA G +A+ + +P I++STD VFDGL+ P E P Sbjct: 61 THVDPAESHPDEAFAVNATAPGVMAEVCAARDLPFIHLSTDAVFDGLTDRPYVETDEARP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 LN+YG+SKLAGE+ ++ +LR +WV+S +G N++ MLRLA+ER + VV DQFG Sbjct: 121 LNVYGRSKLAGEQAALAH-PRAAVLRISWVFSRYGRNYVSFMLRLARERDVLKVVADQFG 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 TPT +A +++ A G+FH A+ G S +FA+ Sbjct: 180 TPTDGEALAAFLVETAPRWAAAPSGDPAFGLFHF-ANAGETSRFEFAKAAIE---RDPLS 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +K+ + A RP S LD +KL W+ V Sbjct: 236 RAKLEPTTQAAFAEPAPRPPRSPLDTAKLRAVFGFEPEPWRPAVER 281 >gi|254821361|ref|ZP_05226362.1| RmlD [Mycobacterium intracellulare ATCC 13950] Length = 295 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 138/285 (48%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ LSS+ Q E++ D+ P DV+IN AAY Sbjct: 4 RIVIAGAGGQLGGYLSSLAADQGREVLAHSSSQWDITDPAAAGRIVQ--RGDVVINCAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV----FDGLSRTPIDEFS 116 T VD AE + AF++N G G IA+A G I++STDYV F G + P + Sbjct: 62 TDVDGAETDEAGAFAVNEAGPGHIARACARAGAQLIHVSTDYVFNGDFGGAAPRPYEPSD 121 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 T P +Y +SK AGE+ V + V++RTAWVY G +F+ M RLA + VV Sbjct: 122 QTAPQGVYARSKAAGEQAVLAALPEAVVVRTAWVYTGGAGKDFVAVMRRLAAGDGPVDVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A++QI + + I H A+ G VS + A +F E Sbjct: 182 DDQIGSPTYVGDLAAALLQIVDDRVPGP------ILH-AANEGAVSRFEQARAVFEEC-- 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G ++V + T+Q+P A RP Y+ L + A + W+ Sbjct: 233 -GADPARVRPVSTEQFPRPAPRPPYTALSSGQSAAAGLRPLRPWR 276 >gi|46579774|ref|YP_010582.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. Hildenborough] gi|46449189|gb|AAS95841.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris str. Hildenborough] gi|311233565|gb|ADP86419.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris RCH1] Length = 291 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + QSL ++ + + VGR D+D+L + A F SP + N A Sbjct: 6 RAVVLGGRTGLLGQSLVLALRNGGWDAVPVGRDDVDVLDAERLADFIDKASPQAVFNTVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ + A +N ++ + G+ +++STD+VF+G TP + Sbjct: 66 WTQVDLAEEHEQEAAQLNRALPASLGRIVRGTGMHLVHLSTDFVFNGRKTTPYSTDDTPD 125 Query: 120 PLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE + S +N ++RTAW++ NF+ ++L L + +I VV DQ Sbjct: 126 PASVYGATKLAGETALLSIAPDNCCVVRTAWLFGPGRRNFVQTILGLCAAKDDIQVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT + +A +++A G+FH+ + G SW + A E+ G Sbjct: 186 TGSPTYTVDLAAGCVRLAELRAT-------GLFHVV-NAGQASWCELA----SEAVHLAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV+ I +K +P KA RPAYS LD S+ I W + +R+ + Sbjct: 234 LHCKVHAITSKDWPQKAARPAYSVLDTSRFTEVTGIVPRPWPQALRDYI 282 >gi|254552368|ref|ZP_05142815.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase rmlD [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 304 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ ++ +++ + D+ P DV+IN AAY Sbjct: 7 RLVITGAGGQLGSHLTAQAAREGRDMLALTSAQWDITDPAAAERIIRHG--DVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 T VD AE +A+++NA G +A+A +G I++STDYVFDG P + Sbjct: 65 TDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTD 124 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 T P +Y +SKLAGE+ V + ++RTAWVY G +F+ M RLA + VV Sbjct: 125 ETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVV 184 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A L+ +D +RG A+ G VS A +F E Sbjct: 185 DDQTGSPTYVADLAEA-------LLALADAGVRGRVLHAANEGVVSRFGQARAVFEEC-- 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A R +YS L + A + W+ Sbjct: 236 -GADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWR 279 >gi|289451078|gb|ADC93994.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Autumnalis] Length = 306 Score = 260 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 97/299 (32%), Positives = 145/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFVDSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFS 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S +Y I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGVV-PHWREDLTLCLKEL 298 >gi|237739563|ref|ZP_04570044.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 2_1_31] gi|229423171|gb|EEO38218.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium sp. 2_1_31] Length = 298 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 90/307 (29%), Positives = 140/307 (45%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + +ID+ ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFKELLDSIGEKYIASDKDEIDITNGDFLRAYVQTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N AAY VD+AE E E+ + +NAE +A A IG I S+D+VF+G Sbjct: 60 NCAAYNYVDRAETEKELCYKLNAEAPATLANIAAEIGANYITYSSDFVFNGLLTSYLYGD 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE V+ NN I+RT+WV+ NF+ + Sbjct: 120 TTGYTEEDEPHPLSTYAKAKYEGELLVSQVMNNPELSSKMYIVRTSWVFGKATMNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + L+KE+ EI V DQ +PT + +A ++ + EN GI+H T D G S Sbjct: 180 IELSKEKNEIKVTDDQISSPTYSKDLAYYSWELLKSSAEN------GIYHFTND-GIASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+YI + + +G + + + A RP +S L C K+ I I WK Sbjct: 233 YEEAKYILDKISWQGN----LIAVKREDLGLPAERPKFSKLSCKKIKEKLGITIPDWKNA 288 Query: 283 VRNILVN 289 + + Sbjct: 289 IDRYFKD 295 >gi|300782937|ref|YP_003763228.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis mediterranei U32] gi|299792451|gb|ADJ42826.1| dTDP-4-dehydrorhamnose reductase [Amycolatopsis mediterranei U32] Length = 301 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 15/295 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFS---------PDV 53 LV G +GQ+ + L+++ V+++ G ++D+ + + + P V Sbjct: 7 VLVPGGSGQLGRDLAALASPSVDVVAPGSAELDVTVTSQVLAAVGALAERAREAGSAP-V 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AAYTAVD AE + E AF++NA+G +A A S +P I++STDYVF G + P + Sbjct: 66 VVNAAAYTAVDAAETDEERAFAVNADGPRVLAAACASRRVPLIHVSTDYVFPGEASAPYE 125 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 P + YG++K AGE+ V + ++RT W+Y GSNF+ +M RL R +S Sbjct: 126 PSDKLGPRSAYGRTKAAGEDAVLGSGASSWVVRTGWLYGRSGSNFVKTMARLESSRDTLS 185 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G PT +A ++++A + S R I H T + G VSW FA+ IF Sbjct: 186 VVDDQVGGPTWTADLAAGLLELASRVAAGEGPSQR-ILHCT-NAGEVSWCGFAQAIFKH- 242 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G S+V + +YP A RPAYS L + + +W+E + Sbjct: 243 --LGADPSRVRPCTSAEYPQAATRPAYSVLSPASWLEAGLTPMRSWEEALDAYFA 295 >gi|154489857|ref|ZP_02030118.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC 43184] gi|154089299|gb|EDN88343.1| hypothetical protein PARMER_00086 [Parabacteroides merdae ATCC 43184] Length = 296 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 130/303 (42%), Gaps = 29/303 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV--EIIRVG-RPD-----------IDLLKPKDFASFFL 47 K LVIG NG + + + ++ E+ PD +D+ + F Sbjct: 3 KILVIGANGFVGRRILDNLSENGACEVFGCSLHPDIRPGGNHTSVRLDINDYPAVEALFD 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV++N +A + D E E A++IN +A + G I++STD+VFDG Sbjct: 63 HICPDVVVNCSALSVPDYCEQHREEAYAINVSAVENLAYCCEHQGSRLIHLSTDFVFDGR 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 S E PLN YG +K GE+ VAS NY I+R VY ++L+L K Sbjct: 123 SDRLYTEEDLPAPLNYYGVTKYQGEQAVASICRNYAIVRVVVVYGKALPGQHGNVLQLVK 182 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 R +EI VV DQ+ TPT IA + ++ H T GI+H+ + Sbjct: 183 NRLEAGQEIRVVADQYRTPTWVEDIADGVERLVH-------TDDSGIYHICGAE----YL 231 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE + + G S + + T++ RP S L K R T +EG+ Sbjct: 232 SIAEMAYRVADYFGLDRSLICPVTTEEMKEATPRPRNSGLSIEKAKRELGYRPHTLEEGL 291 Query: 284 RNI 286 + + Sbjct: 292 KEM 294 >gi|257465949|ref|ZP_05630260.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium gonidiaformans ATCC 25563] gi|315917105|ref|ZP_07913345.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium gonidiaformans ATCC 25563] gi|313690980|gb|EFS27815.1| spore coat polysaccharide biosynthesis protein spsK [Fusobacterium gonidiaformans ATCC 25563] Length = 475 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 14/289 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G NGQ+ + + +E + + +D+ K FF+ +IN AAYT Sbjct: 194 ILILGGNGQLGKEFQKFLQKKMIEYQAIDKDALDVSNEKKCREFFIQKHYCCVINCAAYT 253 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE E E ++N + K + IP I STD VFDG P E NP+ Sbjct: 254 NVDLAEKEKEECKAVNTDAVRIWTKMCEEKEIPFITFSTDMVFDGKDEFPYTEEDMPNPV 313 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YGK+KL GE+ Y+ + VI RT+W++S G NF L AK + + +V DQ + Sbjct: 314 NWYGKTKLEGEKFALQYSRSLVI-RTSWLFSTEGDNFCKKALLWAKNQETLRIVDDQISS 372 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTS IA ++ + G++HM+ G S D Y+ + +G Sbjct: 373 PTSVEDIAVFTWKLYQK-------ACFGLYHMSG-MGESSKYDQIRYLLSLFSWKG---- 420 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ R T+++ A+RP YS L C KL + + WK+ ++ N+ Sbjct: 421 RIERAKTEEFWNLANRPKYSKLCCMKLYGALGLSLPYWKKSIQYFAKNL 469 >gi|124514413|gb|EAY55926.1| DTDP-4-dehydrorhamnose reductase [Leptospirillum rubarum] Length = 288 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 22/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG+ GQ+ L C +++R+ RPD + P+ S DV+IN AAY Sbjct: 1 MRIGVIGSRGQLGADLCLNCSPSDKVVRLDRPDFEFDNPEHLTK-IDDLSLDVLINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS----RTPIDEFS 116 VDKAEDE ++AF +NA+ IA+ GI I STDYVF + P+ E Sbjct: 60 NDVDKAEDEIDLAFRLNAQAPSRIAEYCQKKGIRFITFSTDYVFGEFGKNIPQHPLREED 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-----SNFLLSMLRLAKERRE 171 P+++YG SK AGE V + + +++RT +Y NF+ ML+L K + Sbjct: 120 EALPISVYGVSKWAGERIVLNRNPDALVIRTCGLYGHHRGSHLKKNFVDLMLQLGKGDQT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ TPTS +++ ++ + G++HMT + G SW +FA+ IF Sbjct: 180 LRVVSDQVVTPTSTWELSVNTLKFIQC------SPRGGLYHMTNE-GQCSWFEFAQAIFQ 232 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + K+Y KA RP+YS L K+ + I WK + L Sbjct: 233 ----LKGLTPDLRPVSQKEYGAKARRPSYSVLSKEKIGK-YGISFQPWKSALSQYL 283 >gi|7688725|gb|AAF67512.1|AF170880_19 NovS [Streptomyces caeruleus] Length = 288 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 13/284 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + L ++ E ++ + R D+D+ + P I+N AA+ Sbjct: 4 RWLVTGAAGMLGRDLVALLRGLNEPVVAITRHDLDITDRLSVRAVVDRHRPTTIVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T +AE A +N GA +A I +++STDYVFDG SR P E + T+P Sbjct: 64 TRFGEAEAGESAALLVNGGGARELAAVCRDRSIRLVHLSTDYVFDGTSRRPYAESAVTSP 123 Query: 121 LNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG++K AGE+ V ++ I+RTAW+Y G NF+ M+RL + R + VV DQ+ Sbjct: 124 INAYGRTKQAGEQAVLDLLPDDGTIVRTAWLYGRHGMNFIRKMVRLEQLRETVDVVDDQW 183 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A+ I+ + + G+FH T+ G +W D A F G Sbjct: 184 GQPTWTVDLAQQIVALVRH-------GASGVFHGTS-AGEATWYDLARMTFRL---LGAD 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +V + + + RP Y+ L I W + Sbjct: 233 PGRVRPVPSDRIAGGELRPRYTVLGHDAWREAGLTPIRHWTTAL 276 >gi|24214360|ref|NP_711841.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Lai str. 56601] gi|24195293|gb|AAN48859.1|AE011344_3 dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Lai str. 56601] Length = 306 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IY+STD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYVSTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFVDSKQANIVRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + F Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPEILHFS-NSGVASWYDFALAVRDFS 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S +Y I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIYPIPTEGYPTPAPRPRYSILDLEETRKIFGVV-PHWREDLTLCLKEL 298 >gi|28492996|ref|NP_787157.1| dTDP-4-dehydrorhamnose reductase [Tropheryma whipplei str. Twist] gi|28572206|ref|NP_788986.1| polysaccharide biosynthesis protein [Tropheryma whipplei TW08/27] gi|28410337|emb|CAD66723.1| putative polysaccharide biosynthesis protein [Tropheryma whipplei TW08/27] gi|28476036|gb|AAO44126.1| dTDP-4-dehydrorhamnose reductase [Tropheryma whipplei str. Twist] Length = 287 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 94/285 (32%), Positives = 152/285 (53%), Gaps = 16/285 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 KCL+ G G + + + S+ E + + ++D+ + D++IN AAYT Sbjct: 4 KCLITGGGGMLGRDIRSVFP---ESVALTHDELDITDEYAVLDAARNK--DLLINCAAYT 58 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE A+++N GA A+AKAA I ++ISTDYVF G + P E P +PL Sbjct: 59 QVDAAESNAAKAYAVNEAGARAVAKAAARRSIRVVHISTDYVFSGTAIRPYPEDHPHSPL 118 Query: 122 NIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YGKSK AGE+ V Y+ I+RTAW+Y +G+NF+ S+L+ + + ++VV DQ+G Sbjct: 119 SVYGKSKAAGEKAVLEEYSKGSFIIRTAWLYGQYGNNFVKSILKACRTQDIVTVVNDQYG 178 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +L +A+ I +A + + G++H T + G +W DFA + +A G Sbjct: 179 QPTWSLDLAKQIKLLAES------DAPCGVYHGT-NSGKTTWFDFAGKV---AALGGYDP 228 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++ I + Q+ A RP YSCL + W++ + + Sbjct: 229 KRIIPISSAQFVRPARRPGYSCLGHDAWTAVGLEPMRPWEDALND 273 >gi|94987507|ref|YP_595440.1| dTDP-4-dehydrorhamnose reductase [Lawsonia intracellularis PHE/MN1-00] gi|94731756|emb|CAJ55119.1| dTDP-4-dehydrorhamnose reductase [Lawsonia intracellularis PHE/MN1-00] Length = 291 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 16/288 (5%) Query: 4 LVIGNN-GQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV+G N G + +SL + ++ ++ +GR D D+L+P +++ SP+ I N A+T Sbjct: 7 LVLGGNTGLLGKSLVRCLQQKNWDVHTLGREDGDILQPDFLSNYIDKCSPNAIFNTIAWT 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE A IN + I STD+VFDG P E PL Sbjct: 67 QVDLAETHSNDALLINRTLPSLLGTILKGTSTHLIQFSTDFVFDGTKNVPYVEEDVPYPL 126 Query: 122 NIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++YG SKLAGE+ + NY I+RT+W++ NF+ ++L LAK + + VV DQ G Sbjct: 127 SVYGSSKLAGEQAILQLKLENYSIIRTSWLFGPGRKNFIQTILELAKTKNFLHVVHDQIG 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT +A A I + N +GIFH+ A+ G SW +FA E+ + Sbjct: 187 SPTYTPDLAEASISLVEN-------KGKGIFHI-ANSGQASWCEFA----AEAIRQANLS 234 Query: 241 SKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + I T ++ A RPAYS L+C + I I W + +R + Sbjct: 235 CTIQGISTNEWGKNIAKRPAYSVLNCERYRQITGISIRPWPQALREYI 282 >gi|262066766|ref|ZP_06026378.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium periodonticum ATCC 33693] gi|291379569|gb|EFE87087.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium periodonticum ATCC 33693] Length = 298 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 88/307 (28%), Positives = 138/307 (44%), Gaps = 30/307 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLS----FSPDVII 55 MK L+ G NG++ + E I + ++D+ K ++ + + D II Sbjct: 1 MK-LIFGANGKLGTDFRELLDSIGEKYIASDKDEVDITKADFLRAYVQTMHQNYKIDTII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LS 108 N A Y VD AE E E+ + +NAE +A A IG I STD+VF+G Sbjct: 60 NCAGYNDVDMAETEKELCYKLNAEAPANLANIAAEIGADYITYSTDFVFNGLTTNYLYNE 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSNFLLSM 162 T E +PL+ Y K+K GE + N I+RT+WV+ NF+ + Sbjct: 120 STGYTEEDEAHPLSTYAKAKYEGELLILQVIENPEITSKIYIVRTSWVFGKASMNFVDKI 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + LAKE+ E+ VV DQ +PT + +A ++ N E GI+H T D G S Sbjct: 180 IELAKEKDELKVVDDQVSSPTYSKDLAYYSWELLKNSCE------SGIYHFTND-GIASK 232 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A+Y+ + + +G + + + A RP +S L C K+ I I WK+ Sbjct: 233 YEEAKYVLDKISWQGN----LIAVKREDLGLLAERPKFSKLSCKKIKEKLGITIPNWKDA 288 Query: 283 VRNILVN 289 + + Sbjct: 289 IDRYFKD 295 >gi|256830646|ref|YP_003159374.1| dTDP-4-dehydrorhamnose reductase [Desulfomicrobium baculatum DSM 4028] gi|256579822|gb|ACU90958.1| dTDP-4-dehydrorhamnose reductase [Desulfomicrobium baculatum DSM 4028] Length = 287 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 16/291 (5%) Query: 1 MK--CLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 M+ ++ G G + Q+LS ++ Q + GR +++L + + +V+ N Sbjct: 1 MRSAVVLGGKTGLLGQALSLALTRQGWAVHAPGRDELNLFERPAVEDYLARTKAEVLFNT 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AYT VD+AEDEP A +N + + KA + G+P ++ STD+VF G +P Sbjct: 61 VAYTKVDQAEDEPAEASRLNRQLPLILGKAVQAAGVPMVHYSTDFVFSGKKTSPYGPGDQ 120 Query: 118 TNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T P ++YG++KL GE ++ S N +I+RT+W++ +NF+ +L LA R E+SVV Sbjct: 121 TAPCSVYGQTKLQGERELMSLGLPNLLIIRTSWLFGPCKTNFVTRILELAASRPELSVVH 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+P+ +A + T GIFH+ A+ G SW + A E+ Sbjct: 181 DQIGSPSYTPDLA-------AGSLALLATGATGIFHL-ANAGQASWCELA----TEAVRG 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ I + +YP KA RPAYS LD I W + +R L Sbjct: 229 ADLACRIKPIPSSEYPQKACRPAYSVLDLGAFTAATGIAPRPWLQALREFL 279 >gi|312140708|ref|YP_004008044.1| dtdp-4-dehydrorhamnose reductase rmld [Rhodococcus equi 103S] gi|311890047|emb|CBH49365.1| putative dTDP-4-dehydrorhamnose reductase RmlD [Rhodococcus equi 103S] Length = 292 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 16/293 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ L + + VG ++D+ S+ + V++N AAY Sbjct: 9 RILVTGARGQLGGRLVQCAEAAGLPVEGVGSAELDITDAGAVDSWVAPGA--VVVNCAAY 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT----PIDEFS 116 TAVD AE + A ++N GA +A A G I++STDYVF G P + Sbjct: 67 TAVDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPGD 126 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P YG++KLAGE + + + I+RTAWVY+ G++F+ +MLRL KE+ +SVV Sbjct: 127 PTGPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYTGSGTDFVATMLRLEKEKDTVSVVD 186 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT A+ +A ++++A T H T + G +W D A +F A Sbjct: 187 DQVGSPTYAVDLAAGLLELARVGGRPGAT-----LHAT-NAGSATWFDLARAVF---AGV 237 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + ++ A RPAYS L + W++ + + L Sbjct: 238 GADPERVRPCTSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALAQ 290 >gi|289641469|ref|ZP_06473632.1| dTDP-4-dehydrorhamnose reductase [Frankia symbiont of Datisca glomerata] gi|289508679|gb|EFD29615.1| dTDP-4-dehydrorhamnose reductase [Frankia symbiont of Datisca glomerata] Length = 297 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 16/296 (5%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIR---VGRPDIDLLKPKDFASFF-LSFSPD------V 53 +V G GQ+ L + D + + R ++D+ P + P V Sbjct: 1 MVTGAGGQLGVDLCRLLEADERVHAWAGLTRVELDVTDPARVRAVVRDQARPAKIQGGLV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AA+T VD AE + A+++NA +A A +G ++ISTDYVFDG + P + Sbjct: 61 VVNTAAWTDVDGAESDEAGAYAVNAAAPAHLAAACAEVGATLVHISTDYVFDGAADKPYE 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 PT P + YG++KLAGE+ V + + ++RTAWVY G NF+ ++ RLA+ER ++ Sbjct: 121 TDHPTAPRSAYGRTKLAGEQAVLALCPSSCVVRTAWVYGASGRNFVRTIARLARERDTLA 180 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G+PT ++ +A +I + S I+H T GG +W FA I Sbjct: 181 VVDDQRGSPTWSVDLAVGLIDLVSAAGAGRAASG--IYHCTG-GGDTTWFGFARAIV--- 234 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 AE G KV T +P A RP+YS L + + W+E + Sbjct: 235 AELGMDPEKVRPTTTDAFPRPAPRPSYSVLSPRSWTDAGLRPLRPWREALAAAFAQ 290 >gi|325286260|ref|YP_004262050.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga lytica DSM 7489] gi|324321714|gb|ADY29179.1| dTDP-4-dehydrorhamnose reductase [Cellulophaga lytica DSM 7489] Length = 259 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 133/267 (49%), Gaps = 12/267 (4%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+ Q + + ++E ++D+ + FF + D IN AA Sbjct: 3 KILVTGANGQLGQCIQVLKNAYSNLEFTFCNSDELDITNEERLRFFFQEYKFDYCINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+ AE P A+ +N +G IA+ + ++ISTDYVFDG +P TN Sbjct: 63 YTNVELAEKTPNKAYLVNGQGVKNIAEECRKHSVTLVHISTDYVFDGEKGSPYTISDSTN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YGKSKL GE+ + Y I+RT+W+YS FG NF ++L A + +SV+ + Sbjct: 123 PINEYGKSKLMGEKYIKEILEEYFIIRTSWLYSEFGHNFYKTILNKAIKGENLSVIDTEI 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A+ II I SD GI H T DG P++W DF + I ++ Sbjct: 183 GCPTDANNLAKYIIDIII-----SDNKDFGIKHFT-DGIPMTWFDFTKEIL----KKNEL 232 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCS 266 + Y + A RP S L C Sbjct: 233 DKTTKLVRANNYRSFAKRPKNSTLLCD 259 >gi|317508993|ref|ZP_07966625.1| RmlD substrate binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252703|gb|EFV12141.1| RmlD substrate binding domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length = 286 Score = 258 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 25/298 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 ++ G GQ+ L+ + + + ++ + R +D+ A P DV++N AA T Sbjct: 1 MITGAGGQVGSRLAQVASEHEYNVLALARTQLDICDEDAVAETL---RPGDVVVNCAAET 57 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT--------PID 113 +VD AE + A INAE G +A A D IG I++STDYVF G P + Sbjct: 58 SVDTAESDSARAHQINAEAVGNLAAACDRIGARFIHVSTDYVFAGQEEGWFSVRLARPYE 117 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKERRE 171 P+ +YG+SKLAGE V++RT+WV+S + +F+ + A+ Sbjct: 118 TDDEPRPIQVYGESKLAGERLAFERNPRSVVVRTSWVFSGERNGIDFVSTAREQAESGGV 177 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + V DQ G+PT +L + ++++ E + + GG S D A +F Sbjct: 178 MRAVTDQVGSPTHSLDLVYGLMELVWRGDEGA------LLQFCNTGG-CSRYDLARAVFE 230 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G V + + A RP YS L + W++ +R L + Sbjct: 231 E---LGADPGLVRPCMSWELSRPASRPPYSVLSVASWVQRGLRPPRAWRDALRYALTH 285 >gi|157413785|ref|YP_001484651.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9215] gi|157388360|gb|ABV51065.1| dTDP-4-dehydrorhamnose reductase [Prochlorococcus marinus str. MIT 9215] Length = 314 Score = 258 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 101/299 (33%), Positives = 150/299 (50%), Gaps = 10/299 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G+ GQ+ ++L + +I + R + ++L + S +PD I+N A+ Sbjct: 1 MKILITGSKGQLGRTLIKLKPTKAKIFAMNRNNFNMLDIPNCLKVIRSINPDWIVNCGAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 T VD AE E+A +N A AK +G + ISTDYVFDG + P Sbjct: 61 TNVDLAESNKEVAMEVNYHAPKAFAKEMKDLGGRFLQISTDYVFDGLRPNMKPYTTNDKK 120 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +PL IYG SK E+ + N +ILRT+W+ + FGSNFLL +L L + +EI VV Sbjct: 121 SPLGIYGISKAKAEDFIEDIFLGTNKGIILRTSWILAPFGSNFLLKILNLLLKNKEIKVV 180 Query: 176 CDQFGTPTSALQIARAIIQIAH--NLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 DQ G+PT+ +A +I NL + + GI H D G +W + A I F Sbjct: 181 NDQIGSPTNIYSLAEVCWKIIELNNLEIIFNENKNGILHW-QDNGQTNWYEIALKIRNFG 239 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++V I T YPT A RPA+S LDC+ + + W+ G+ I+ I Sbjct: 240 KEIDLINYNTQVTPISTFDYPTPAKRPAFSVLDCNSAKRVLDHKGIDWRCGLEKIMKQI 298 >gi|257054676|ref|YP_003132508.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM 43017] gi|256584548|gb|ACU95681.1| dTDP-4-dehydrorhamnose reductase [Saccharomonospora viridis DSM 43017] Length = 313 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 16/299 (5%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSF--------SP 51 LV G GQ+ + L + +++I G ++D+ +P Sbjct: 14 VLVPGGRGQLGRDLVAAAAALGDRIDVIAPGSAELDVTEPGAVVEAVTDLATGAAQSGRR 73 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 V+IN AAYTAVD AE++ AFS+NA+G +A S G+P +++STDYVF G + P Sbjct: 74 AVVINAAAYTAVDAAEEDEGTAFSVNADGPRMLAAVCSSRGVPLVHVSTDYVFSGTADRP 133 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + P + YG++K AGE V ++RTAW+Y G+NF+ +M+ L R Sbjct: 134 YEPEDALGPRSAYGRTKAAGENAVLGSGARAWVVRTAWLYGAGGNNFVRTMMELESRRDT 193 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SVV DQ G+PTS+ +AR ++++A + + + H T + G +W A +F Sbjct: 194 VSVVDDQCGSPTSSADLARGLLELADRITSGRGPRRK-VLHCT-NSGQTTWFGLARAVFE 251 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 E G +V T+ +P A RP YS L + + + W+E + + Sbjct: 252 E---LGADPGRVRPCSTEDFPRPAPRPPYSVLSNAAWLESGLTPLRPWREALTAFFAEL 307 >gi|325675653|ref|ZP_08155337.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707] gi|325553624|gb|EGD23302.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus equi ATCC 33707] Length = 297 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 16/293 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ L + + VG ++D+ S+ + V++N AAY Sbjct: 14 RILVTGARGQLGGRLVQCAETAGLPVEGVGSAELDITDAGAVDSWVAPGA--VVVNCAAY 71 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT----PIDEFS 116 TAVD AE + A ++N GA +A A G I++STDYVF G P + Sbjct: 72 TAVDAAETDEAAATAVNETGARNLASACSKAGADLIHVSTDYVFSGDRAGADAAPYEPGD 131 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PT P YG++KLAGE + + + I+RTAWVY+ G++F+ +MLRL KE+ +SVV Sbjct: 132 PTGPRTAYGRTKLAGELAIRAVLPDAHIVRTAWVYTGSGTDFVATMLRLEKEKDTVSVVD 191 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G+PT A +A ++++A T H T + G +W D A +F A Sbjct: 192 DQVGSPTYAADLAAGLLELARVGGRPGAT-----LHAT-NAGSATWFDLARAVF---AGV 242 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + ++ A RPAYS L + W++ + + L Sbjct: 243 GADPERVRPCTSAEFVRPAPRPAYSVLSPRAWEAAGLTPLRPWRDALADALAQ 295 >gi|289451237|gb|ADC94151.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Hebdomadis] Length = 306 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 143/299 (47%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSIL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + I+RT+WVYS +NF ++L+L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFVDSKQANIVRTSWVYSSHSNNFPKTILKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRDLA 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLDETRKIFGVV-PHWREDLTLCLKEL 298 >gi|331086196|ref|ZP_08335278.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406355|gb|EGG85869.1| hypothetical protein HMPREF0987_01581 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 224 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 134/231 (58%), Gaps = 11/231 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L+ G NGQ+ ++L+ D+++I D+D+ + + PD+IIN AA Sbjct: 3 KILITGCNGQLGRALNQFYAKHPDIQLINTDVEDLDIANANEVMEYVSKIHPDIIINCAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT VD E E+A+ IN +G ++ A++ +G ++IS+DYV+DG + P E Sbjct: 63 YTNVDDCEKNQELAYRINVDGPKNLSVASNEVGAVLVHISSDYVYDGRKKEPYLEEDDYA 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P ++YG +K+ G+ V + Y I+RTAW+Y G NF L+ML+LA++R++I+VV DQ Sbjct: 123 PQSVYGMTKMKGDAYVTEIAHKYFIVRTAWLYGE-GKNFPLTMLKLAEKRKQIAVVMDQI 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 G+PTSA ++ + I + + G++H T + G SWA+FA+ F Sbjct: 182 GSPTSAYEVVKVIDLLCK-------SDQYGVYHATCE-GSCSWAEFAKNTF 224 >gi|262201794|ref|YP_003273002.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247] gi|262085141|gb|ACY21109.1| dTDP-4-dehydrorhamnose reductase [Gordonia bronchialis DSM 43247] Length = 319 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 24/301 (7%) Query: 5 VIGNNGQIAQSLSSMCV---QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAY 60 ++G GQ+ +L + +I + D+D+ + + DV+IN AAY Sbjct: 14 IVGAAGQLGTALRARRPADFPGHDIRALTSADLDIGDEASVRAALGDLAAGDVVINCAAY 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT---------- 110 T VD A+ + A+ +NA+G +A+A + G I++STDYVF G Sbjct: 74 TDVDGAQSDEAGAYRVNADGPAHLARATVAAGAWLIHVSTDYVFSGQVGGSETGPRSPAL 133 Query: 111 PIDEFS--PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLA 166 P + P +YG SKLAGE ++RTAWVY +F+ +M RL Sbjct: 134 PYEPDDVGEVIPATVYGASKLAGERSALDTDPRTTVVRTAWVYTGGPDSRDFVGTMRRLE 193 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + R +SVV DQ G+PT A +A + ++A + + H T + G SW + A Sbjct: 194 QTRETVSVVDDQVGSPTYARDLADGLWELAATGPTEAVAGA--VLHGT-NAGRASWYEVA 250 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +F A+ G +V+ T ++P A RPA+S L + A + W+ + Sbjct: 251 RAVF---AQVGASPDRVHPCTTAEFPRPAPRPAFSVLSGASWAAAGLRPLREWRAALDEA 307 Query: 287 L 287 + Sbjct: 308 I 308 >gi|330991365|ref|ZP_08315316.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] gi|329761384|gb|EGG77877.1| putative dTDP-4-dehydrorhamnose reductase [Gluconacetobacter sp. SXCC-1] Length = 270 Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 2/262 (0%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 GRP D +P PD++IN AA+TA+D AE+EP+ A N EG +A Sbjct: 2 GRPLFDFEQPDTVVRVMQDMRPDLVINTAAWTAIDAAEEEPDRARLTNTEGPALLAWLCA 61 Query: 90 SIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 +P +++STD+VF G P E PT+P ++YG+S+ GE+ V + +++RT+W Sbjct: 62 GQAVPLLHVSTDHVFSGTRGRPYRETDPTDPQSVYGRSRAEGEKAVLAACARAMVVRTSW 121 Query: 150 VYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS-DTSLR 208 VY +G NF+ +ML A ++ VV DQ G PT+A +A A++Q+A + ++ + R Sbjct: 122 VYGPYGRNFVRTMLEAACRETQLQVVADQSGHPTAAPDLADALLQVAARIRQSGWQPAYR 181 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G+FH+ GG +W + A + G P V + T PT A R + LDC + Sbjct: 182 GVFHVAG-GGSATWHELASAAVAHAGRHGHPAPPVMPVMTADRPTAAARRVDARLDCGRF 240 Query: 269 ANTHNIRISTWKEGVRNILVNI 290 + + W++ + ++ + Sbjct: 241 RQVFGLELPHWRDSLGAVVETM 262 >gi|289451157|gb|ADC94072.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Grippotyphosa] Length = 306 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+ L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLGWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALTVRDLA 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLEETRKIFGVV-PHWREDLTLCLKEL 298 >gi|310829176|ref|YP_003961533.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] gi|308740910|gb|ADO38570.1| dTDP-4-dehydrorhamnose reductase [Eubacterium limosum KIST612] Length = 288 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + + G GQ+ +L I D+D+ + PDVIIN AA Sbjct: 6 RIWITGAEGQLGHTLYKTLEDAARDILTTDKDVDVTDLDGIMQYADINRPDVIINCAAMA 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V E+EP A+ +NA GA ++ A+ IG I ISTD VF G+S+ EF P+ Sbjct: 66 DVKDCEEEPIQAYKVNALGARNLSIASRKIGAKIIQISTDDVFGGMSQKTYTEFDTPEPV 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YGKSKLAGE V ++++R++W+Y GSNF+ +L +A++ V DQ G+ Sbjct: 126 TVYGKSKLAGEGFVRELNPRHLVIRSSWIYGQSGSNFVFWVLEMARKGEPFEVPNDQVGS 185 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP-Y 240 PTSA+++A+ I+++ T G+FH A G S FA+ I + P Sbjct: 186 PTSAVELAKFIVRLL-------STREYGVFH-AACEGVCSRFYFAKEILRLAGLENVPID 237 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + ++ +P P+++ L+ + T ++ W++ +R + + Sbjct: 238 AAVSKNTSRFFPY----PSHTVLENMMMYMTEVYQMPRWEDAIREFMETL 283 >gi|269793220|ref|YP_003318124.1| dTDP-4-dehydrorhamnose reductase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100855|gb|ACZ19842.1| dTDP-4-dehydrorhamnose reductase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 278 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 139/293 (47%), Gaps = 23/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G GQ++ + + + + +E + +GR D+D+ + P + N AAY Sbjct: 3 KFLITGKQGQLSLAFAELLKTRGIEFLALGRHDLDISDLNSVRRVIAHYKPGAVFNGAAY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VDKAE+ E AF NA G +A A + IP I STDYVFDG P PT P Sbjct: 63 NDVDKAEENRETAFLANAIGPKNLALACAEMSIPLITFSTDYVFDGKKSAPYTTEDPTCP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERREISVVCD 177 LN YG+SKLAGE V +++ R +WV+ SNFL +L A + + +V D Sbjct: 123 LNAYGESKLAGEIFVHESCQQFILARVSWVFGEKGKTESNFLKKLLYWASSNKRLRIVDD 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q +P+ A IA A+ + + G+ H+ + G S D+A+ G Sbjct: 183 QISSPSFAPDIAEAVYSLFKD-------GKWGLSHLC-NTGFCSRYDWAKIALQTVNWSG 234 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ R ++++ T A RPA+S L S + +W+E L N+ Sbjct: 235 ----ELMRAKSREFRTAAQRPAFSALRSS-------YELPSWEESTLRCLSNL 276 >gi|188997435|ref|YP_001931686.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932502|gb|ACD67132.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium sp. YO3AOP1] Length = 284 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 131/291 (45%), Gaps = 14/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L++G NGQ+ + Q ++I + R + ++ + PDV+IN AA Sbjct: 1 MKYLILGKNGQLGKEFLKTLENQKKDVIGLSRLECNITNFDKLNQVLSQYKPDVVINSAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPT 118 Y VD AE + A +N+ +A ++ I+ STDYVFDG E Sbjct: 61 YNLVDDAEKQYWEAVKVNSIAVKNLAYLSNVYKFRLIHYSTDYVFDGKKENGLYTEDDVP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NPLN YGKSK GE + T NY++ R +WVY NF+ +L AK + V ++ Sbjct: 121 NPLNDYGKSKFMGEIFLREETGNYLLFRVSWVYGEGKQNFIYKLLTWAKNNEYLKVAYNE 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 PTS I ++ D LRG+FH+T + G S ++A+ IF Sbjct: 181 VSVPTSTRTIVDITLKAL-------DNDLRGMFHLT-NSGYASRYEWAKEIF----RIKK 228 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + + A RP +S + K++ N I W E + L N Sbjct: 229 IDKFILPVSKEIFNLPAKRPDFSAMSNRKISQILNTEIPYWNEELNEFLKN 279 >gi|325109034|ref|YP_004270102.1| dTDP-4-dehydrorhamnose reductase [Planctomyces brasiliensis DSM 5305] gi|324969302|gb|ADY60080.1| dTDP-4-dehydrorhamnose reductase [Planctomyces brasiliensis DSM 5305] Length = 283 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 18/289 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 L++G GQ+ +L + Q I +GR ++++ + A P IIN A+ V Sbjct: 5 LILGVRGQLGTALHARMPQ---AIGLGRAELNVDDLDNLAHTLDEHQPQQIINCTAWNQV 61 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPIDEFSPTNPL 121 D AE E AF NA A+A+ +++STDYVF G + E P Sbjct: 62 DLAETETAAAFHTNALVPRALARYCQQRECRLVHVSTDYVFGGNANPGRGWTEDDRPIPS 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 ++YG SKLAGE V + ++RT +Y G+ NF+ +ML+LA+ R + VV DQ Sbjct: 122 SVYGSSKLAGENFVLTECPAAQVIRTCGLYGFGGNGNFVTTMLKLARAGRSLKVVDDQIC 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A AI + +S G+FH+T + G SW +FA+ IF + + Sbjct: 182 TPTLVEDLAVAIEALLA-------SSEPGLFHVT-NRGHSSWFEFAQQIFSLADVQA--- 230 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + +Y A RPA+S LDCS+ + T + + L Sbjct: 231 -DLSPVSSAEYGAAARRPAWSVLDCSRFERVTGQTLPTLDDALGRFLSE 278 >gi|5902171|gb|AAD55455.1| 4-ketoreductase [Streptomyces antibioticus] Length = 295 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G + + L ++ E + +G +D+ +P + P +++N AA Sbjct: 1 MRWLITGAAGMLGRELVRRLAENEEDVAALGHDHLDVTRPSAVRAALAEHRPGIVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAAD-SIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 YTAVD AE + A +NAE +A+ +++STDYVF G +RTP E PT Sbjct: 61 YTAVDDAETDEAAAALLNAEAPRLLAEGLRPHRRHGLVHLSTDYVFPGDARTPYAEDHPT 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P + YG++K GE+ V + +LRTAW+Y G +F+ +M+ I VV DQ Sbjct: 121 APRSAYGRTKRDGEQAVLTALPTATVLRTAWLYGRTGRSFVRTMIEREARGGAIDVVADQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT +A II + + + GI H T + G +W D A+ +F Sbjct: 181 RGQPTWTGDLADRIIAVGRH------PGVHGILHAT-NAGSATWYDLAQEVFRLLDA--- 230 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + A RPAYS L + T + W+ +R +I Sbjct: 231 DPGRVRPTTGAAFRRPAPRPAYSVLGHDRWRGTGLAPLRDWRSALREAFPDI 282 >gi|220925353|ref|YP_002500655.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] gi|219949960|gb|ACL60352.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] Length = 303 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 104/289 (35%), Positives = 141/289 (48%), Gaps = 3/289 (1%) Query: 3 CLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G GQ+ L DV I R +D+ A+ S +IN AAYT Sbjct: 5 ILILGGGGQVGTELQLHAWPADVAIHAPAREALDITDETAVAAALTERSYAAVINTAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVDKAE E A+ +NA +A A GIP + +STDYVFDG +P P Sbjct: 65 AVDKAESEIGAAWRLNALAPAYLAAATARAGIPLVQVSTDYVFDGTGAGAYLPEAPVQPT 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK AGE V + + ++RTAWV S NF+ +MLRLA ER + VV DQ G Sbjct: 125 SVYGASKAAGELAVRTGNPRHAVVRTAWVVSPHRGNFVKTMLRLAGERDGLRVVDDQRGC 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT+A +A A+ IA L E+ + G +H + G +W FA I + RG Sbjct: 185 PTAAADLAAALATIALRLAEDP-AAPTGTYHCV-NAGATTWCGFARAIMAGAQARGARAV 242 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I + +PT A RPA S L + L I W + +IL + Sbjct: 243 PVEPIPSSAFPTPARRPANSELSTASLTRDFGIVPRPWPAALDDILDRL 291 >gi|311896578|dbj|BAJ28986.1| putative dTDP-4-keto-L-rhamnose reductase [Kitasatospora setae KM-6054] Length = 304 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 13/290 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G G + + + + +E + R ++D+ P + DV++N AA+ Sbjct: 11 RWLVTGAAGMLGRDVLRVLAGAGLEATALTRAELDVTDPDAVLAAVRGH--DVVVNCAAW 68 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE + A ++N G +A A + G +++STDYVF G P E +PT P Sbjct: 69 TNVDGAETDEAAATAVNGTGVRHLAAACAATGARLVHVSTDYVFPGDGTEPYAEDAPTAP 128 Query: 121 LNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YG+SKLAGE V ++RTAW+Y G+NF+ +MLRL +R + VV DQ Sbjct: 129 VNAYGRSKLAGELAVLELLPETGHVVRTAWLYGAGGNNFVATMLRLGAQRDTLDVVDDQH 188 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++ + N + G++H TA G +W A + G Sbjct: 189 GQPTWTYALAERLVALGRNR-----QAPAGVYHGTA-SGRTTWCGLAREAYRLG---GLD 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + A RPA+S L ++ A + W+E + L + Sbjct: 240 PERIRPTTSAAFVRPAVRPAFSVLGHARWAEAGLAPLPDWREQLAQALTD 289 >gi|17940025|gb|AAL49432.1|AF316500_19 RmlD [Leptospira interrogans] Length = 306 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 146/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+A L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLAWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + + I+RT+WVYS G+NF ++++L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFANSKQANIIRTSWVYSSHGNNFPKTIVKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRDLA 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLEETRKIFGVV-PHWREDLTLCLKEL 298 >gi|13539633|gb|AAK29184.1| unknown [Aggregatibacter actinomycetemcomitans] Length = 233 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 103/230 (44%), Positives = 138/230 (60%), Gaps = 4/230 (1%) Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A TAVD+AE E E + +IN +G +A+ A S+ ++ISTDYVFDG S E Sbjct: 1 APTAVDRAETEVERSEAINVKGPQYLAETAKSVDAAILHISTDYVFDGRSAGKYKETDAA 60 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P IYGK+KLAGE+ VA + +++LRTAWV+ G+NF+ +MLRLAK R + VV DQ Sbjct: 61 DPQGIYGKTKLAGEQAVAEANDKFIVLRTAWVFCEHGNNFVKTMLRLAKTRDTLGVVADQ 120 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT A IA A+IQIA +I ++ GI+H T + VSW DFA IF E+ + Sbjct: 121 IGGPTYAGDIAAALIQIAEKIIA-GESVEYGIYHFTGE-PYVSWCDFARAIFDEAVSQNM 178 Query: 239 --PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 V I T YPT A RPA SCLD +K+ I+ S W+ ++NI Sbjct: 179 LEKAPLVNAITTADYPTPAKRPANSCLDLTKIQQAFGIQPSDWQRALKNI 228 >gi|289450994|gb|ADC93911.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Canicola] Length = 306 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 144/299 (48%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G NGQ+A L+ + E + GR + DL A SP ++++ AYTAVD Sbjct: 5 TGKNGQLAWELAERFKSNGLEAVGFGREEWDLADLDSAARILKD-SPRILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E A+ IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENAYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE+ + + I+RT+WVYS +NF ++L+L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGEKWIRNTFVDSKQANIVRTSWVYSSHSNNFPKTILKLLQDSNRHELR 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI--FW 231 V+ DQ G PT A ++A II + + +++ S I H + + G SW DFA + Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYGILKGE--SYPKILHFS-NSGVASWYDFALAVRDLA 240 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 S ++ I T+ YPT A RP YS LD + + W+E + L + Sbjct: 241 HSFSLIENLKPIFPIPTEGYPTPAPRPRYSILDLDETRKIFGVV-PHWREDLTLCLKEL 298 >gi|149369375|ref|ZP_01889227.1| dTDP-4-dehydrorhamnose reductase [unidentified eubacterium SCB49] gi|149356802|gb|EDM45357.1| dTDP-4-dehydrorhamnose reductase [unidentified eubacterium SCB49] Length = 260 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 96/260 (36%), Positives = 136/260 (52%), Gaps = 12/260 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV G NGQ+A+ L +D ++ + R +D+ F S + D IN AA Sbjct: 3 KILVTGANGQLAKCLIDAAPKSEDYKVDYLSRAALDITDEVSVLEHFSSNTYDYCINTAA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YT V+KAE E AF +NA +A A + I+ISTDYVFDG T +E TN Sbjct: 63 YTNVEKAESEQTQAFLVNAASVQFLANACKNQATTLIHISTDYVFDGTKSTAYEETDATN 122 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N+YG SKL GE ++ Y ILRT+W+YS +G NFL ++L+ +++++ +Q Sbjct: 123 PINVYGASKLKGELLLSQTMEQYFILRTSWLYSQYGHNFLNTILKHLAAGKDLTITTEQV 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 GTPT+A +A+ I QI S+T G++H + + G +W DFA I S Sbjct: 183 GTPTNANDLAQCIWQIII-----SETKAYGLYHYSNN-GEATWFDFASEILKVSPLLSNS 236 Query: 240 YSKVYRIFTKQYPTKAHRPA 259 T YPT A RP Sbjct: 237 KLA----KTDHYPTFAKRPK 252 >gi|305665781|ref|YP_003862068.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170] gi|88710545|gb|EAR02777.1| dTDP-4-dehydrorhamnose reductase [Maribacter sp. HTCC2170] Length = 268 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 101/271 (37%), Positives = 140/271 (51%), Gaps = 14/271 (5%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK LV G +GQ+ + L + E+ + +D+ F SF+ D I Sbjct: 1 MKKKSILVTGASGQLGKCLRKIESDYPELSFVFKDASQLDITNKSAVFKLFDSFNFDFCI 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYT V++AE P+ AF IN EG G I++ + ++ISTDYVFDG TP + Sbjct: 61 NCAAYTNVNEAEKNPKQAFRINEEGTGNISELCRQKEVVLLHISTDYVFDGEKGTPYTKD 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP+N YGKSKLAGE ++ T Y I+RT+W+YS FG NF ++L+LAK + + V Sbjct: 121 DMPNPINEYGKSKLAGERQIQQTTRRYYIIRTSWLYSEFGKNFYTTILKLAKSNKILRVT 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 +Q G PT+A +A ++QI N I GI H T D P++W DFA+ I E Sbjct: 181 DEQKGCPTNANNLAAYLMQIIGNEIVLD----YGIVHFT-DCEPMTWFDFAKNIIKE--- 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 + V + K T RP S L Sbjct: 233 -NNLQNTVEVVRDKNNRTFVKRPKNSVLSIK 262 >gi|297570696|ref|YP_003696470.1| dTDP-4-dehydrorhamnose reductase [Arcanobacterium haemolyticum DSM 20595] gi|296931043|gb|ADH91851.1| dTDP-4-dehydrorhamnose reductase [Arcanobacterium haemolyticum DSM 20595] Length = 282 Score = 255 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M +V+G G + L + +D ++ V DID+ K V N AA Sbjct: 1 MTWMVVGAKGMLGTDLVARIKEDGHDVRAVDIDDIDITKMDSVEQVVQGVDVVV--NCAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE+ AF +NA G +A+ IG ++ISTDYVF G TP E +P + Sbjct: 59 FTAVDPAEENEGTAFRVNATGPANLARQCAKIGARLVHISTDYVFRGDGETPWTEEAPMD 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P++ YG++K AGE V +YTN+++I+RTAW+Y FG+ F +M+RL++ + VV D+ Sbjct: 119 PVSAYGRTKAAGEWAVRTYTNDFLIVRTAWLYGKFGNCFPKTMVRLSETHETLKVVVDEV 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I+++ + G++H T+ G SW F + I G Sbjct: 179 GQPTWTVDLADLIVRLVDA------KAPSGVYHGTSQ-GQTSWNGFTKEIMR---AVGKS 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V+ + A RP++S L L I W E Sbjct: 229 PDMVHETTAAAFDRPAKRPSFSALGHDALTAIGVEPIGEWNE 270 >gi|240172502|ref|ZP_04751161.1| putative dTDP-rhamnose modification protein [Mycobacterium kansasii ATCC 12478] Length = 304 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 18/285 (6%) Query: 2 KCLVIGNNGQIAQ-SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ + + + E++ D+ P + + DV++N AAY Sbjct: 4 RIVITGAGGQLGRVAAAQAARAGREVLAQTSSQWDITDPGAAGAIIQTG--DVVLNCAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFS 116 T VD AE + A+++NA G +A+A +G I++STDYVF+G P + Sbjct: 62 TDVDAAESDEARAYAVNASGPEHLARACARVGARLIHVSTDYVFNGDFNGAQPHPYEPGD 121 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 T P ++Y +SKLAGE+ V + V++RTAWVY G++F+ M RLA I VV Sbjct: 122 ATAPQSVYARSKLAGEQAVLAALPQAVVVRTAWVYTGGDGTDFVAVMRRLAAGDGPIDVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PT +A A++++A + G+ H A+ G VS A +F E Sbjct: 182 SDQTGSPTYVADLAAALLEVAGAGVPG------GVLH-AANEGAVSRFAQACAVFEEC-- 232 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 G +V + + Q+P A RP+YS L A + W+ Sbjct: 233 -GADPRRVRPVSSAQFPRPAPRPSYSALGGRAWAAAGLTPLRPWR 276 >gi|300932855|ref|ZP_07148111.1| hypothetical protein CresD4_02236 [Corynebacterium resistens DSM 45100] Length = 293 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 104/297 (35%), Positives = 148/297 (49%), Gaps = 21/297 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSF-----SPDVII 55 M +V+G+ GQ+ L+ + V R +DL FF SF P +I Sbjct: 1 MTFVVLGSKGQVGSFLAQQL--GSAALPVDRSQVDLSSRLSVEQFFSSFSTPTSRPAALI 58 Query: 56 NPAAYTAVDKAEDEPEIAF--SINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTP 111 N AA+TAVD+AE E F +NA G +A+ +GIP +++STDYVF G + Sbjct: 59 NCAAFTAVDEAESETGEVFNNQVNAVAPGWVAQHCQRLGIPMVHVSTDYVFGGELPTGQE 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN---FLLSMLRLAKE 168 PTNP+N YG++K AGE V + ++RTAWVYS F +MLRLA++ Sbjct: 119 YHPHHPTNPVNAYGRAKAAGERAVIEAGGH--VVRTAWVYSGPEHPGKDFATTMLRLAQQ 176 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + VV DQFG P+ A +A A+ ++A L E + H T G P +W +FA Sbjct: 177 GVDPKVVNDQFGRPSHAAVVASALKEVAEALNEGETLPC--VLHATGSGQPTNWCEFARE 234 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 IF S G +V I T +YPT A RPA S L + ++ W+E + + Sbjct: 235 IFRVS---GHDPERVTPISTSEYPTPAQRPANSVLSLDEWERCGLPKLPAWRETLES 288 >gi|195953908|ref|YP_002122198.1| dTDP-4-dehydrorhamnose reductase [Hydrogenobaculum sp. Y04AAS1] gi|195933520|gb|ACG58220.1| dTDP-4-dehydrorhamnose reductase [Hydrogenobaculum sp. Y04AAS1] Length = 275 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 85/287 (29%), Positives = 134/287 (46%), Gaps = 14/287 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G NGQ+ ++ + Q+ + + + + D D+ F S+ PD+++N +AY Sbjct: 1 MKYLILGKNGQLGKAFLNAL-QNEDTLGLDKEDCDISDFDRLKEVFDSYRPDIVLNCSAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VDKAE + A+ NA G ++A I STDYVFDG E NP Sbjct: 60 NFVDKAETDFPNAYKTNAYGVKSLAYLCKQYNAYFITYSTDYVFDGKKEGLYKEEDMPNP 119 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 +N YGKSKL GE +Y+I RT+WVY NF+ +L AK + + D+F Sbjct: 120 INEYGKSKLTGEIWTLEEGLESYLIFRTSWVYGDGTQNFVYKLLNWAKNNDILKIAIDEF 179 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT A + ++ D +L G++H+ + G S ++A+ I G Sbjct: 180 SVPTPAD-------FLVEKTLKAIDKNLSGLYHLVPN-GYASRYEWAKLILKVY----GI 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + + + A RP +S LD SK+ N W + +R Sbjct: 228 KKIIIPVSKEVFNLPARRPDFSALDSSKIQKDLNENFEEWNDLLRRF 274 >gi|111220689|ref|YP_711483.1| dTDP-4-dehydrorhamnose reductase [Frankia alni ACN14a] gi|111148221|emb|CAJ59891.1| dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) [Frankia alni ACN14a] Length = 302 Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 26/305 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-----QDVEIIR---VGRPDIDLLKPKDFASFF-LSFSP 51 M+ LV G GQ+ L + D + +GR ++D+ P + P Sbjct: 1 MRVLVTGAAGQLGADLCRLLEARTAEPDSPVRAWAGLGRAELDITDPARVRAVLRDQARP 60 Query: 52 D------VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 V+IN AA+T VD AE + A+++NA G +A + + +STDYVFD Sbjct: 61 AKIQGGLVVINTAAWTDVDGAEADEAGAYAVNATGPAHLAATCAELDATLVQLSTDYVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLR 164 G + P + T+P YG++KLAGEE V + + ++RTAWVY G NF+ ++ R Sbjct: 121 GRATKPYETGDETDPAGAYGRTKLAGEEAVRALLPASSYVVRTAWVYGATGRNFVKTISR 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LA+ER +SVV DQ G+PT + +A ++ + + + G++H T + G +W Sbjct: 181 LARERGAVSVVADQTGSPTWSADLAAGLLDLV------ASPAPPGVYHCT-NTGETTWYG 233 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA I E G + V T +P A RPAYS L A+ + W ++ Sbjct: 234 FARRIMTEI---GLDPATVSATTTDAFPRAAARPAYSVLSTRSWADAGLTPLRPWHRALQ 290 Query: 285 NILVN 289 + Sbjct: 291 DAFAR 295 >gi|296138790|ref|YP_003646033.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola DSM 20162] gi|296026924|gb|ADG77694.1| dTDP-4-dehydrorhamnose reductase [Tsukamurella paurometabola DSM 20162] Length = 321 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 19/299 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 ++ G GQ+ +L + + + + + R D+D+ + A+ L ++IN A+ Sbjct: 19 NIVITGAAGQLGSALVAAAADRGLAVRGLTRADLDVTSSQAVAALDLDVD-TLLINCVAH 77 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSPT 118 TAVD AE EP+ A +N G +A+ G ++ISTDYVF P + PT Sbjct: 78 TAVDAAESEPDAAALLNERVPGRLARRCAQTGARLVHISTDYVFGPAPTPAHPWEPGDPT 137 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----------IFGSNFLLSMLRLAKE 168 P ++YG++KL GE + V++RTAWVY+ + +F+ +M RLA + Sbjct: 138 GPASVYGRTKLDGERAARAADPRTVVVRTAWVYTGRTAGPDGHTAWAPDFVGTMGRLADQ 197 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + +VV DQ G+PT A +A ++ +A + +++ G A GG +W D A Sbjct: 198 GADPAVVADQTGSPTYAPDLAAGLLDLAD--LFSAEPGRPGTVLHAAGGGTATWFDVARG 255 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +F A G +V T +P A RPAYS L A + W++ + L Sbjct: 256 VF---ARTGADPERVTPCTTADFPRPAPRPAYSVLSPVAWAAAGLTPLPDWRDALDRAL 311 >gi|157961263|ref|YP_001501297.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] gi|157846263|gb|ABV86762.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] Length = 363 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 150/354 (42%), Gaps = 68/354 (19%) Query: 1 MKCLVIGNNGQIAQSL---------------------SSMCVQDVE-------IIRVGRP 32 M+ L+ G GQ+ Q+L ++ + +E +I V Sbjct: 1 MRILITGAAGQLGQALLSIAGLTQVNLAERTVAQQMLVALLPEALECIETTDEVIGVSHQ 60 Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +D+ F + +PDV+IN AAY AVDKAE + + A INAEG +A Sbjct: 61 ALDICDIDSIRKAFDTIAPDVVINCAAYNAVDKAEFDIDKAMLINAEGPKLLAGECQRHN 120 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVY 151 I ++ISTD+VFDG E PL++YGKSKL GE V+ + I+RT+W+Y Sbjct: 121 IRLVHISTDFVFDGELLRAYTEQDSPAPLSVYGKSKLEGERWVSDILGSKATIIRTSWLY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI----------- 200 S +G NF+ +M L K + +SV+ DQ+G+PT +A AI + Sbjct: 181 SCYGHNFVKTMQSLFKVKESLSVINDQYGSPTWCEALAVAIFMLVKQTQATILTRPSVCE 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA-----------------ERGGPYSKV 243 + L ++H A SW +FA I ++ + Sbjct: 241 DKPAKGLADLYHYAASAS-ASWYEFACEIQRQAGSVTELAPSTKLSQNKEFAPNSADCSI 299 Query: 244 YRIFTKQY-----PTKAHRPAYSCLDCSKLANTHNIRI-----STWKEGVRNIL 287 I TK + A RP S L+ KL + I +TW++ + ++ Sbjct: 300 LPITTKAWQELHDNRLALRPKQSALNTQKLCHQLAIEPGSLLTATWQQQLAAMV 353 >gi|213964836|ref|ZP_03393035.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium amycolatum SK46] gi|213952372|gb|EEB63755.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium amycolatum SK46] Length = 324 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 23/305 (7%) Query: 3 CLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + G GQ+ +L DVE+ + R +D+ + L D+II+ AA T Sbjct: 24 IAITGAAGQLGTALQRDSFAADVEVRALTRAQLDITDSAAVEATPLLDDVDIIISAAAAT 83 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTPIDE 114 VD AE +P A INA G +A A I+ISTDYVF R + Sbjct: 84 DVDGAESDPGSAHLINALGPKYLAARAKKEDAYLIHISTDYVFGDVAIDEMTGQRRALRV 143 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKERR 170 T P +YG++KL GE V + ILRTAWV+S +F+ +M+RLA+ Sbjct: 144 DDFTAPQTMYGRTKLVGENNVRDSGARFAILRTAWVWSGPTQPEAKDFVSTMMRLAETAT 203 Query: 171 E-------ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + I VV DQ G PT +A AI +++ ++ +++ G FH+T G +W Sbjct: 204 DDKGNPAIIKVVDDQHGNPTFVGALAGAIWELSERVLSEPNSAPTGTFHVTG-SGQATWF 262 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + A +F + G +V + ++P A RPA+S LD S + + W++ + Sbjct: 263 EVAREVFRLT---GHDPQRVVACTSSEFPRPAPRPAWSVLDGSAWSEVGLHSLPEWQDTL 319 Query: 284 RNILV 288 R +L Sbjct: 320 RAVLT 324 >gi|284047224|ref|YP_003397564.1| dTDP-4-dehydrorhamnose reductase [Conexibacter woesei DSM 14684] gi|283951445|gb|ADB54189.1| dTDP-4-dehydrorhamnose reductase [Conexibacter woesei DSM 14684] Length = 290 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 15/290 (5%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G G + Q ++ ++ + R D+D+ A+ + +PD ++N AA+ Sbjct: 4 KLLVTGAAGMLGQDVARAARAAGHDVTALARADLDVTDGAAVAAVVTAAAPDAVVNCAAW 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---SRTPIDEFSP 117 T VD AED PE A ++NA+ AG +A+AA S G +++STDYVFDG P E Sbjct: 64 TNVDGAEDAPEGAHAVNADAAGHLARAATSAGARLVHVSTDYVFDGQRAAGAAPYVESDA 123 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 TNP ++YG++KLAGE+ VA+ ++ I+R++W++ + G+NF +MLRL ER E++VV D Sbjct: 124 TNPQSVYGRTKLAGEQAVAAADGSHAIVRSSWLFGVSGANFAATMLRLGAERDEVTVVED 183 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT+ +A A L + +G+FH+ G PVSW FA IF ++ Sbjct: 184 QVGCPTATADLAEA----LVALAVGAAREAQGVFHVAGGGEPVSWNAFASEIFRQA---- 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V T + P A RP +S L + + W++G+ L Sbjct: 236 GVDCRVLPCTTAEMPRPAPRPPFSALTTERADTPL---LPPWQDGLTRFL 282 >gi|146283215|ref|YP_001173368.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] gi|145571420|gb|ABP80526.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri A1501] Length = 278 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 105/267 (39%), Positives = 158/267 (59%), Gaps = 6/267 (2%) Query: 26 IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 +I +G+ ++D+ P+ A+ +PD+IIN AAYTAVD AE++ E A+ +N +GA +A Sbjct: 3 VIGLGKAELDVSCPRSVANAVQLANPDLIINAAAYTAVDAAEEQVEAAYRVNRDGAHQLA 62 Query: 86 KAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVIL 145 K A GIP ++STDYVFDG P E TNP+++YG SK AGE +V + ++IL Sbjct: 63 KEAQRHGIPLFHLSTDYVFDGALARPYVESDQTNPISVYGASKRAGELQVQQF-EKHLIL 121 Query: 146 RTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 RT+WV+ GSNF+ +MLRLA E E+ VV DQ G PTSA +IA ++ +A + Sbjct: 122 RTSWVFGRHGSNFVKTMLRLAGET-ELRVVDDQVGCPTSADRIASVLLDLALRYQADGKL 180 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCL 263 G++H ++ SW +FA+ IF ++ G ++ I T+ YPT A RPA+S L Sbjct: 181 PW-GLYHYSSQ-PACSWFEFAQAIFEQAVRAGIVRHPPRLTPIATEAYPTPAKRPAWSVL 238 Query: 264 DCSKLANTHNIRISTWKEGVRNILVNI 290 DCS+ I + W + ++ + Sbjct: 239 DCSRFTEAFGIPPALWSVDLEAVIDAL 265 >gi|116330829|ref|YP_800547.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116124518|gb|ABJ75789.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 306 Score = 253 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 141/299 (47%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G +GQ+ L+ D+E I R + DL SP ++++ AYTAVD Sbjct: 5 TGKSGQLGWELTKRFKSLDLESIGFSREEWDLTDLDSVEKILKD-SPKILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E + IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE + + I+RT+WVYS +G+NF ++L+L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELK 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V+ DQ G PT A ++A II + + +++ I H + + G SW DFA I S Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYEILKGG--GYPEILHFS-NSGIASWYDFAIAIRDIS 240 Query: 234 AERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ YPT A RP YS LD ++ + WKE + L I Sbjct: 241 YSFSLIENLKPISPIPTESYPTAAPRPRYSILDLNETRKIFG-PVPHWKEDLTLCLKEI 298 >gi|116327947|ref|YP_797667.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120691|gb|ABJ78734.1| dTDP-4-dehydrorhamnose reductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 306 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 141/299 (47%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G +GQ+ L+ D+E I R + DL SP ++++ AYTAVD Sbjct: 5 TGKSGQLGWELTKRFKSLDLESIGFSREEWDLTDLDSVEKILKD-SPKILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E + IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE + + I+RT+WVYS +G+NF ++L+L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELK 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V+ DQ G PT A ++A II + + +++ I H + + G SW DFA I S Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYEILKKG--GYPEILHFS-NSGIASWYDFAIAIRDIS 240 Query: 234 AERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ YPT A RP YS LD ++ + WKE + L I Sbjct: 241 YSFSLIENLKPISPIPTESYPTAAPRPRYSILDLNETRKIFG-PVPHWKEDLTLCLKEI 298 >gi|89001373|gb|ABD59206.1| InkL [Nonomuraea longicatena] gi|223954221|gb|ACN29711.1| dTDP-dihydrostreptose synthase [Nonomuraea longicatena] Length = 282 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 89/285 (31%), Positives = 141/285 (49%), Gaps = 18/285 (6%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ LV G G +A+ L + ++ GR ++DL + S+ P V++N AA Sbjct: 1 MRWLVTGGAGMLARDVLGRAALIGDPVLAPGRAELDLCDGRAVRELVGSYRPRVVVNCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE A ++N +A+A G +++STDYVFDG S P E +PT Sbjct: 61 WTAVDDAEAHEAEALAVNGHAVRVLAEACARSGARLLHLSTDYVFDGASAAPYREDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG++KLAGE + ++R+AW+Y G+NF +M+RLA + + + VV DQ Sbjct: 121 PVNAYGRTKLAGEAAALEHGQ--YVVRSAWLYGAGGANFARTMIRLAGQVQTVDVVDDQR 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++++A + + G++H T+ G +W FA IF G Sbjct: 179 GQPTWTEDLADFLVRLALSDL------PPGVYHGTS-AGATTWYGFAREIFTL---LGAD 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V + A RPA S L ++ I W+ + Sbjct: 229 PGRVRPVAGAALGRVARRPASSVLAHTRWE-----PIRHWRAALH 268 >gi|10803349|emb|CAC13137.1| dTDP-4-dehydrorhamnose reductase [Gluconacetobacter xylinus] Length = 295 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 109/286 (38%), Positives = 153/286 (53%), Gaps = 8/286 (2%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G +GQ+A +L+ E ++RVGRPD D +P +P+ ++N AA+T Sbjct: 7 ILVTGGHGQLATALA-----GHEGVMRVGRPDFDFDRPGTIDQIMAENTPEFVVNAAAWT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + E A N G +A A + GIP I+ISTDYVF G +P E P +P Sbjct: 62 AVDAAETDAEGAARANHAGPARLAAACRARGIPLIHISTDYVFSGDKGSPYMETDPVDPR 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG +K AGE+ V + + +ILRTAWVYS + NF+ +M+ A R + VV DQ G Sbjct: 122 SVYGSTKAAGEQAVLAAQPDSIILRTAWVYSPYNRNFVRTMVEAAARRPTLRVVSDQIGN 181 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLR-GIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA +A+ I+ I + E + GI+H A G SW D A +A G P Sbjct: 182 PTSADALAQTIMHIIRQIRETGWKADYAGIYH-AAGQGATSWYDLACAAVAAAARHGNPQ 240 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I T +PT A RPA + LDC++L T W+ V + Sbjct: 241 PVMEPITTADWPTPARRPADARLDCTRLQETFGHAPGPWQPEVERV 286 >gi|159037627|ref|YP_001536880.1| dTDP-4-dehydrorhamnose reductase [Salinispora arenicola CNS-205] gi|157916462|gb|ABV97889.1| dTDP-4-dehydrorhamnose reductase [Salinispora arenicola CNS-205] Length = 297 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 142/290 (48%), Gaps = 8/290 (2%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV G G + + ++ + + R ++D+ P+ + F ++ P V++N A +T Sbjct: 9 WLVTGAGGMLGREVIAELGRAGLSAAGTDRHELDVTDPERVRTAFRAYRPAVVVNCAGWT 68 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE++ A ++N G +A+ G + +STDYVFDG +P E +P P Sbjct: 69 AVDAAEEQEAAAHAVNGRGPELLAEECRRSGAVLLQLSTDYVFDGRGSSPYAEDAPVAPR 128 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG++KLAGE V ++RTAW+Y G NF+ S++R + R + +V DQ G Sbjct: 129 SAYGRTKLAGEAAVLHGLPETGYVIRTAWLYGAGGPNFVHSIIRAERSRATVDIVDDQCG 188 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A ++++ + GI+H T GG +W +F IF A G Sbjct: 189 QPTWARDLAAHLVRLGGAARRGDAPA--GIYHGTG-GGDTTWYEFGRQIF---AALGADP 242 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V +++ +A RPAYS L + + +W+ R + Sbjct: 243 ARVRPTSSERLAWRAPRPAYSVLGHDRWRLAGMAPLRSWRTAFREAFDEV 292 >gi|206602706|gb|EDZ39187.1| DTDP-4-dehydrorhamnose reductase [Leptospirillum sp. Group II '5-way CG'] Length = 288 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 22/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ VIG+ GQ+ +I+++ RPD D+ P+ S DV+IN AAY Sbjct: 1 MRIGVIGSRGQLGADFCLNSSPSDKILKLDRPDFDIDNPEHLTK-IDELSLDVLINSAAY 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS----RTPIDEFS 116 VDKAEDE + AF +N + IA I + STDYVF R P+ E Sbjct: 60 NDVDKAEDEIDQAFRLNTQAPSRIAAYCQKKNILFVTFSTDYVFGEFEKKIPRHPLREAD 119 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-----SNFLLSMLRLAKERRE 171 PL++YG SK AGE V + + +++RT +Y NF+ ML+L K + Sbjct: 120 EALPLSVYGVSKWAGERMVLNRNPDALVIRTCGLYGHNRGSHLKKNFVDLMLQLGKGNQT 179 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ TPTS +++ +++ + G++HMT + G SW +FA+ IF Sbjct: 180 LRVVSDQIVTPTSTWELSVNTLKLIQC------SPKGGLYHMTNE-GQCSWFEFAQAIF- 231 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + K+Y KA RP+YS L K+ + I WK + L Sbjct: 232 ---HFKGLTPDLRPVSQKEYGAKAKRPSYSVLSKEKVGK-YGIAFQPWKSALSQYL 283 >gi|258654332|ref|YP_003203488.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM 44233] gi|258557557|gb|ACV80499.1| dTDP-4-dehydrorhamnose reductase [Nakamurella multipartita DSM 44233] Length = 302 Score = 252 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 148/297 (49%), Gaps = 19/297 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDIDLLKPKDFASFFLSF--------SPD 52 + LV G GQ+ + + G ++D+ + F Sbjct: 8 RLLVTGARGQLGTEVVAAATAAGLTYAAHGSRELDITDVDAVTATVADFGRAADEAGQSA 67 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+IN AAYTAVD AE + + A+++NA G +A+A + G+ I++STDYVF G R P Sbjct: 68 VLINAAAYTAVDAAESDRDAAYAVNATGPQNLARACAACGVRLIHVSTDYVFPGDGRRPY 127 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 + PT P ++YG SKLAGE+ V + ++RTAWV+ G+NF+ +M LA R + Sbjct: 128 EIDDPTGPRSVYGASKLAGEQAVLASLAGAQVVRTAWVWGTTGANFVKTMAALAASRPTV 187 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 VV DQ G+PT A +A ++++A + + G+ H T + G +W +FA IF Sbjct: 188 DVVDDQRGSPTYAADLAAGLLELAGSDVPG------GVLHAT-NAGETTWYEFARAIF-- 238 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 AE G +V+ + ++ A RPAYS L + A + W+ + + + Sbjct: 239 -AELGEDPGRVHPTTSDKFLRPAPRPAYSVLSGAAWAAAGLNPLRPWRVALADAMAR 294 >gi|296168938|ref|ZP_06850607.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896407|gb|EFG76060.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 296 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 95/271 (35%), Positives = 133/271 (49%), Gaps = 19/271 (7%) Query: 16 LSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAEDEPEIA 73 L S+ Q +++ + + D+ P P DV+IN AAYT VD AE + A Sbjct: 18 LRSLAASQGRDVLALTSSEWDITDPAAAERIVE---PGDVVINCAAYTNVDGAESDEAGA 74 Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---SRTPIDEFSPTNPLNIYGKSKLA 130 +++NA G G IAKA G I++STDYVF G P + PT P +YG+SKLA Sbjct: 75 YAVNATGPGNIAKACARAGARFIHVSTDYVFGGDHAGGARPHEPSDPTAPAGVYGRSKLA 134 Query: 131 GEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIA 189 GE+ V + V++RTAWVY G +F+ M RLA + VV DQ G+PT +A Sbjct: 135 GEQAVLTALPGAVVVRTAWVYTGGDGKDFVAVMRRLAAGDGPVKVVADQVGSPTYVGDLA 194 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 A++QI D + G A+ G VS + IF E G +V + T Sbjct: 195 EALLQIV-------DDDVPGPILHAANEGAVSRFEQTRAIFAEC---GADPERVLPVSTA 244 Query: 250 QYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 ++P A RPAYS L + A + W+ Sbjct: 245 EFPRPAPRPAYSALSGRESAAAGLRPLRPWR 275 >gi|171912156|ref|ZP_02927626.1| dTDP-4-dehydrorhamnose reductase, RfbD [Verrucomicrobium spinosum DSM 4136] Length = 315 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 10/289 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++IG G++ +L + +++ V R D+DL + + S P V+I A T Sbjct: 29 KVVIIGAGGRLGSALVTKYAPKHDVVPVRRADLDLSQSDAIVPYLQSHHPSVVIYTAGTT 88 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD E+ PE + NAE +A+ G I+ISTDYVF G P E P+ Sbjct: 89 NVDLCEEHPEESLKTNAEAPARLAEYCKVHGARLIHISTDYVFSGNDPLPRKESDLAEPI 148 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG+ KL GE+ V + + ++++R +W++ +F +L+ A E E+ + D+ Sbjct: 149 NVYGRHKLVGEQAVLNASPEFLVVRVSWLFGKDRPSFPDMILKRALENDEVFAIADKVSC 208 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY- 240 PT + +A I + SDT RGI H+ + G +W ++ + +A G P Sbjct: 209 PTFSDDLAEWIEPMI------SDTRYRGILHLC-NSGSCTWQEYGQKTLDIAASLGLPLR 261 Query: 241 -SKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V +P KA RP ++ D S+ W+E + + L Sbjct: 262 ATTVQGQSRVNFPAFKAARPEFTAFDISRYMELSGTTPRAWQEALEDYL 310 >gi|84489910|ref|YP_448142.1| dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM 3091] gi|84373229|gb|ABC57499.1| predicted dTDP-4-dehydrorhamnose reductase [Methanosphaera stadtmanae DSM 3091] Length = 286 Score = 251 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 20/294 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 MK + G +G + + L+++ D EI+ + D+ + PD Sbjct: 1 MKFFITGGSGLLGERLATIASNDDEIVLSHNSNPTKNTIKCDITDKNEVEKVINKNKPDT 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA T VD EDE +IA+ IN++G +A+AA++IG IY+STD+VFDG Sbjct: 61 IVHCAAMTDVDLCEDEIDIAYRINSDGTRNMAQAAENIGAKIIYVSTDFVFDGDK-GYYS 119 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREI 172 E NPL IY KSK GE ++ Y+ N+ I R + +Y NF ++ + I Sbjct: 120 EDDEVNPLGIYAKSKYDGEVQLKKYSTNWAIARVSVLYGWHKKANFTTWVINQLRSNNSI 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 ++V DQ +PT A AI +IA GI+H + ++ DF + I Sbjct: 180 NIVTDQINSPTYADNAGEAIFEIAKQ-------DKNGIYHTAGND-RINRFDFTQKI--- 228 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + + ++ KA RP S L+ +K+ + T E + + Sbjct: 229 AEAFNLNKDLINPTTSDKFIQKAPRPRDSSLNVNKIKKELGFTMETCSESLERM 282 >gi|170748796|ref|YP_001755056.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium radiotolerans JCM 2831] gi|170655318|gb|ACB24373.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium radiotolerans JCM 2831] Length = 301 Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats. Identities = 107/292 (36%), Positives = 152/292 (52%), Gaps = 4/292 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV+G GQ+ L ++ V + GR ++D+ A+ + + +IN AA Sbjct: 1 MDVLVLGGAGQVGTELQALAWPDGVTVHAPGRAELDITDADAVAAALAARAYRAVINTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPT 118 YTAVDKAE + A+ +NA +A A + IP +++STDYVF G +P Sbjct: 61 YTAVDKAESDVVAAWRLNALAPAILAAATAARSIPLVHVSTDYVFAGTKPDGAYAPDAPI 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P ++YG SK AGE V + + ++RTAWV S NF+ +MLRLA ER ++VV DQ Sbjct: 121 DPQSVYGASKAAGELAVRTGNPRHAVVRTAWVVSPHRGNFVKTMLRLAAERDALTVVNDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSA +A A+ IA + + + + G FH + G +W FAE I SA RGG Sbjct: 181 HGCPTSAADLAAALATIAQAMAADPE-APAGTFHCV-NRGDTTWCGFAEAIVAGSARRGG 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L L + I W+ + +IL + Sbjct: 239 RAVPVKGIPTSAYPTPARRPANSRLSTDSLTAAYGIAPRPWQAALDDILDRL 290 >gi|284028523|ref|YP_003378454.1| dTDP-4-dehydrorhamnose reductase [Kribbella flavida DSM 17836] gi|283807816|gb|ADB29655.1| dTDP-4-dehydrorhamnose reductase [Kribbella flavida DSM 17836] Length = 276 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 98/292 (33%), Positives = 142/292 (48%), Gaps = 25/292 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G GQ+ ++L++ + V D+D+ + F ++N AA+ Sbjct: 1 MAILVTGAGGQLGRALAARLP---DARLVTSADLDITDRAALDA-FDWTGITALVNAAAW 56 Query: 61 TAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVDKAED A+ +NA G +A A +GIP +++STDYVF G + P Sbjct: 57 TAVDKAEDAGSTLAAWDVNAAGVANLAWHARRLGIPLVHVSTDYVFGG-GEGFLPAGHPI 115 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +P +YG +K AGE + Y ++RT+WV+ + F+ +MLRL ER E++VV DQ Sbjct: 116 DPQGVYGITKAAGELAAR-LSPTYYVVRTSWVFGDGPN-FVRTMLRLGAERDELTVVDDQ 173 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +G PT + +A A + + G +H T G VSWADFA I G Sbjct: 174 YGRPTYTVDLAAA------LIALLESEAPSGTYHATGAGDVVSWADFAAAIL------AG 221 Query: 239 PYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 KV I + +Y A RPA S LD S L I + W+E + L Sbjct: 222 TSCKVRPISSAEYAQGKVIAPRPANSALDLSALEAV-GITMRDWREALAEYL 272 >gi|4234802|gb|AAD12970.1| RmlD [Leptospira borgpetersenii] Length = 306 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 96/299 (32%), Positives = 141/299 (47%), Gaps = 19/299 (6%) Query: 6 IGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 G +GQ+ L+ D+E I R + DL SP ++++ AYTAVD Sbjct: 5 TGKSGQLGWELTKRFKSLDLESIGFSREEWDLTDLDSVEKILKD-SPKILVHCGAYTAVD 63 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD------GLSRTPIDEFSPT 118 KAE + E + IN+ I++ I IYISTD+VFD G + S Sbjct: 64 KAESDSENVYKINSLSVKKISEECLKRKIHLIYISTDFVFDANSETIGDTIRFWKPDSTL 123 Query: 119 NPLNIYGKSKLAGEEKVASYT---NNYVILRTAWVYSIFGSNFLLSMLRLAKE--RREIS 173 +P IYG SK GE + + I+RT+WVYS +G+NF ++L+L ++ R E+ Sbjct: 124 SPKGIYGLSKAEGERWIQNIFADSKQANIVRTSWVYSSYGNNFPKTILKLLQDPKRTELK 183 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 V+ DQ G PT A ++A II + + +++ I H ++ G SW DFA I S Sbjct: 184 VIEDQLGRPTWAGRLADFIIFLIYEILKKG--GYPEILH-PSNSGIASWYDFAIAIRDIS 240 Query: 234 AERGGP--YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T+ YPT A RP YS LD ++ + WKE + L I Sbjct: 241 YSFSLIENLKPISPIPTESYPTAAPRPRYSILDLNETRKIFG-PVPHWKEDLTLCLKEI 298 >gi|268317519|ref|YP_003291238.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252] gi|262335053|gb|ACY48850.1| dTDP-4-dehydrorhamnose reductase [Rhodothermus marinus DSM 4252] Length = 308 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 83/305 (27%), Positives = 129/305 (42%), Gaps = 32/305 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q L + + +++ R +D+ + F Sbjct: 5 RILITGANGLLGQELVAQLSWHAEYDVLATARDPEPRFRGGSCGYVPLDITDARAVRRIF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F+P V+IN AA T VD+ E E E + +N E +A+ G I +STD+VFDG Sbjct: 65 QDFTPTVVINCAAMTQVDRCEIEKEACWRVNVEAVETLARLCRQFGARLIQVSTDFVFDG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-TNNYVILRTAWVYS----IFGSNFLLS 161 + P E NP+N YG+SKLA E V + + I RT VY + SN L Sbjct: 125 TA-GPYRETDRPNPINFYGRSKLASENVVREAGIDRWAIARTVLVYGTGEQLSRSNIALW 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 ++ + R I VV DQ+ TPT +A I +I + GI+H++ +S Sbjct: 184 VIEQLSQGRRIRVVTDQWRTPTYVADLAAGIERIVRY-------NKHGIYHISGRE-FLS 235 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 DFA I + S + + + A RP + K R + E Sbjct: 236 VYDFACLI---ADVFDLDRSLIEPVDSATLNQVAPRPPRTGFIILKAETELGYRPRSIPE 292 Query: 282 GVRNI 286 +R++ Sbjct: 293 ALRHL 297 >gi|160874621|ref|YP_001553937.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|160860143|gb|ABX48677.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|315266862|gb|ADT93715.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678] Length = 369 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 67/344 (19%) Query: 3 CLVIGNNGQIAQSLSSMCVQ----------------DVEIIRVGRPDIDLLKPKDFASFF 46 L+ G Q+AQ+L + +E+ + R +D+ + A+ F Sbjct: 27 VLITGAKSQLAQALLRVAADIGELALNSNANTNTSIPLELYALSRSQLDITDAANIAAVF 86 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P +IN AAY AVD AE + A +NA G +A+ G +++S+DYVF G Sbjct: 87 DQYRPSWVINCAAYNAVDAAEHDAIEANRVNALGPELLAQQCLLSGARLLHVSSDYVFGG 146 Query: 107 LS----------------------RTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYV 143 + P E PL+ YG SKL GE+KV + + Sbjct: 147 QAVCDVRETGAEQYQNLDSAPNHLPRPFVELDAPEPLSAYGTSKLLGEQKVLAVLGEDAT 206 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 I+RT+W+Y G NF+ +ML L + + + V+ DQ G PT + +A+ I Q+ Sbjct: 207 IVRTSWLYGQDGHNFVQTMLNLMRTQPSLEVIVDQIGCPTWSDALAKVIWQLVMQ----- 261 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV--YRIFTKQYP--------T 253 G+FH +A G SW +FA I ++ V I + Y + Sbjct: 262 --QCSGVFHYSAQ-GQCSWYEFACEIQRQALALNLLSQPVVIQPITSAHYAKQALNRGMS 318 Query: 254 KAHRPAYSCLDCSKLANTHN----IRIS------TWKEGVRNIL 287 A RP+YS LD +K+ +T + + W++ + +L Sbjct: 319 LAKRPSYSVLDSAKVQSTLAVNTTLPLPDNVVWQDWRQQLNCML 362 >gi|329118000|ref|ZP_08246713.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] gi|327465888|gb|EGF12160.1| dTDP-4-dehydrorhamnose reductase [Neisseria bacilliformis ATCC BAA-1200] Length = 316 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 13/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G GQ+ +++ + E+I +D+ + A+ +F PD +IN AA+ Sbjct: 27 MRILLTGAKGQLGRAVRDRLPDEWELIATDSKTLDITDREAVANMLENFQPDAVINTAAF 86 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AED F++NAEG +A+AA ++G +++S+DYVFDG SR P E P NP Sbjct: 87 AGSAAAEDRAARFFAVNAEGTRNLAQAAFAVGAKFVHLSSDYVFDGKSRLPYAETDPPNP 146 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YG+SKLAGE + V++RT+W+YS G NF+ +L A I + D G Sbjct: 147 QCVYGRSKLAGELLALAAEPATVVVRTSWIYSAHGGNFVTRLLDRAAAGDAIRLAADNAG 206 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG--G 238 PT A +A A+I + +G+ H G S FA+ + AER Sbjct: 207 CPTYAPDLAAALIGLLRL-----PRFPQGLLHYCG-GQAFSEYTFAQAVLQLEAERNPVF 260 Query: 239 PYSKVYRIFTKQYPTKAHR--PAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + + HR P YS LDC+K + +W++ + L Sbjct: 261 KMPELIPVPSAELHQ--HRNAPLYSVLDCAKARS-LGFTPGSWQKNLAETLAE 310 >gi|116625364|ref|YP_827520.1| dTDP-4-dehydrorhamnose reductase [Candidatus Solibacter usitatus Ellin6076] gi|116228526|gb|ABJ87235.1| dTDP-4-dehydrorhamnose reductase [Candidatus Solibacter usitatus Ellin6076] Length = 294 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 136/293 (46%), Gaps = 22/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +V G GQ+ L Q +I R +D+ P + ++ +V+ N AAY Sbjct: 4 RAVVFGAAGQLGIELVRELQQRRYTVISWDRAQVDITDPVAVENALANYDAEVVFNAAAY 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE EP+ AF +NA +A A ++ STDYVFDG +R P E PT+P Sbjct: 64 NQVDVAEKEPQAAFLVNALAVRNLALACRQADAQLVHFSTDYVFDGAARHPYVEEDPTHP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI-----FGSNFLLSMLRLAKERREISVV 175 L Y SKLAGE +Y + +++RT+ V+ NF+ MLRLA I VV Sbjct: 124 LGAYAVSKLAGELYAQAYLDRALVVRTSGVFGPGGLTTARGNFVELMLRLAASPNPIRVV 183 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D +PT A +A I + I G+FH+ G PVSW FA IF + Sbjct: 184 EDHVASPTFAPLLASRTIDLVERGIA-------GLFHI-GGGAPVSWFQFARLIFEAAGL 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + R +Y T A RP YS L +KL + ++++LV Sbjct: 236 KPTLLATNER----EYRTPARRPKYSALSNAKLERNGVAAMP----ALKDVLV 280 >gi|160890313|ref|ZP_02071316.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492] gi|156860045|gb|EDO53476.1| hypothetical protein BACUNI_02754 [Bacteroides uniformis ATCC 8492] Length = 300 Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K LVIG NG + + +++ G DI D+ + F Sbjct: 5 KILVIGANGFTGRRILDDLSRNLSYQTTGCSLHDDICPHSGNYRFIRTDICNRQAVEKLF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+IN +A + D E A ++N +A+ ++ G I++STD+VF G Sbjct: 65 QEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSRFIHLSTDFVFGG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + P E P+N YG +KL GE+++A+ +Y I+R VY ++L+L Sbjct: 125 DTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAALPRQHGNVLQLV 184 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + E+ VV DQ+ TPT +++ + ++ + GI+H+ ++ Sbjct: 185 ANRLRSNEEVFVVSDQWRTPTFVGDVSQGVEKLISH-------PQNGIYHLCGSE-CLTI 236 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A + + G S + + TK+ K RP +S L K + + T +EG Sbjct: 237 ADIA---YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKASRELGYQPRTLEEG 293 Query: 283 VRNI 286 ++ + Sbjct: 294 IKQM 297 >gi|270296883|ref|ZP_06203082.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] gi|270272870|gb|EFA18733.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D20] Length = 300 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K LVIG NG + + +++ G DI D+ + F Sbjct: 5 KILVIGANGFTGRRILDDLSRNLSYQTTGCSLHDDICPHSGNYRFIRTDICNRQAVEKLF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+IN +A + D E A ++N +A+ ++ G I++STD+VF G Sbjct: 65 QEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSRFIHLSTDFVFGG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + P E P+N YG +KL GE+++A+ +Y I+R VY ++L+L Sbjct: 125 DTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAALPGQHGNVLQLV 184 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + E+ VV DQ+ TPT +++ + ++ + GI+H+ ++ Sbjct: 185 ANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLISH-------PQNGIYHLCGSE-CLTI 236 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A + + G S + + TK+ K RP +S L K + T +EG Sbjct: 237 ADIA---YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAHRELGYQPRTLEEG 293 Query: 283 VRNI 286 ++ + Sbjct: 294 IKQM 297 >gi|183981297|ref|YP_001849588.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium marinum M] gi|183174623|gb|ACC39733.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium marinum M] Length = 308 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 22/289 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ V+ +++ + D+ + DV+IN AAY Sbjct: 7 RLVITGAAGQLGGVLAAQAVRAGRDVLAKTSSEWDITDAAATEEIIGTG--DVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SRTPI 112 T VD AE + A+++NA G +AKA G I++STDYVFDG P Sbjct: 65 TDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADLPDGAQPQPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERRE 171 + T P +Y +SK AGE V + + V++R+AWVY GS+F+ M RLA Sbjct: 125 EPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIMRRLAAGEGP 184 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PT +A L+E +D +RG A+GG VS A +F Sbjct: 185 VDVVDDQTGSPTYVAD-------LAAALLEVADAGVRGRLLHAANGGAVSRFGLARAVFE 237 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 E G +V + T Q+P A RP YS L + A + W+ Sbjct: 238 EC---GTDPQRVRPVSTAQFPRPAVRPGYSALGGRQWAAAGLTPLRPWR 283 >gi|328544170|ref|YP_004304279.1| dTDP 4-dehydrorhamnose reductase (DTDP-L-rhamnose synthetase) [polymorphum gilvum SL003B-26A1] gi|326413913|gb|ADZ70976.1| dTDP 4-dehydrorhamnose reductase (DTDP-L-rhamnose synthetase) [Polymorphum gilvum SL003B-26A1] Length = 290 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 144/298 (48%), Gaps = 21/298 (7%) Query: 1 MKCLVIGNNGQIAQSLSSM---CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 MK +++G NGQ+ + +++ + R +DL + + S DV+IN Sbjct: 1 MKAILLGPNGQLGTDIVRANTALGAPLDLHPLDRQALDLTDFETVRTVLGSADFDVLINC 60 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFS 116 ++Y D E ++ ++NA +A+ + +++STDYVF G RTP+ E Sbjct: 61 SSYHKTDDVEQNAQLGVTVNAHLVQLLARLCEQRAARFVHVSTDYVFGGQSKRTPLSEDD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERRE 171 PT P+N+YG SK GE +LR A ++ I G+ NF+ +M+R +E+ Sbjct: 121 PTAPVNVYGASKAMGETLATLACARTTVLRVASLFGIAGASGKGGNFVETMIRFGREKGA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ +PTS IA +I + +E GI+H+ + G +W FAE I Sbjct: 181 LRVVADQHMSPTSTYDIATTLIDMLKADVE------PGIWHVV-NSGDATWHAFAEEIIR 233 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ G + V I + ++PT A RP YS L +K+A W +R+ L + Sbjct: 234 QT----GIAATVEPITSAEFPTPAMRPPYSVLSNAKVAAVVG-ERRHWTVALRDYLRD 286 >gi|303247232|ref|ZP_07333506.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] gi|302491391|gb|EFL51279.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio fructosovorans JJ] Length = 293 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + + L+ ++ R ++D F + N A Sbjct: 9 RAIVLGGKTGLLGRPLTKALADAGFAVLPTTRSELDPFDAAAVERALADFGATHLFNTVA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ A+ +N + +AK + + + STD+VF G + P E T Sbjct: 69 YTAVDAAEDDVPGAYRLNRDLPALLAKCCRAAKVMLVQYSTDFVFSGDADAPYTEEDATG 128 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE+ + Y ILRTAW++ NF+ +ML LAK+R E+ VV DQ Sbjct: 129 PRSVYGASKLAGEKAILESGLLQYQILRTAWLFGPGKKNFVATMLNLAKDREELRVVGDQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT + +A +A + GIFH G SW + E+ G Sbjct: 189 VGSPTYTVDLAGWSADLALK-------NPVGIFHAVG-TGHGSWCEL----AAEAVAAAG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + +YP KA+RP YS L +KLA W + VR + Sbjct: 237 LSCRVVSIPSSEYPQKAYRPRYSVLSNAKLAEAIGRVPRPWVQTVREYV 285 >gi|167623451|ref|YP_001673745.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167353473|gb|ABZ76086.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 375 Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 153/368 (41%), Gaps = 81/368 (22%) Query: 1 MKCLVIGNNGQIAQSL---------------------SSMCVQ-------DVEIIRVGRP 32 M+ L+ G GQ+ Q+L ++ + E+I V Sbjct: 1 MRVLITGAAGQLGQALLSIAELTQVTAAELTAPQQMLVALLPEVLACIATTDEVIGVSHQ 60 Query: 33 DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 +D+ + F +F PDV+IN AA+ VDKAE + + A ++NA G +A + Sbjct: 61 QLDICALHSIQAAFDAFKPDVVINCAAFNGVDKAETDTDKAIAVNATGPKLLAGECKRLN 120 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVY 151 I ++ISTD+VFDG + P E +PL+ YG+SKL GE V I+RT+W+Y Sbjct: 121 IRLVHISTDFVFDGALKRPYTEQDMPSPLSAYGRSKLEGERWVNDILGAKATIIRTSWLY 180 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL------------ 199 S G NF+ +M L K R +SV+ DQ G+PT +A I ++ Sbjct: 181 SCCGQNFVKTMQGLFKTRERLSVINDQSGSPTWCETLALVIFKLIKQTQLANSDRKVAAQ 240 Query: 200 ---IENSDTSLRGIFHMT----------------------ADGGPVSWADFAEYIFWE-- 232 + ++ L ++H A+G SW +FA I Sbjct: 241 NHNADGTEKGLAHLYHYAAGSCVAEDYLVAEGFSADGSLVAEGSSCSWYEFACEIQRLTM 300 Query: 233 ---SAERGGPYSKVYRIFTKQY-----PTKAHRPAYSCLDCSKLANTHNIRI-----STW 279 + ++ I + + A RP S L+ K+ + I+ ++W Sbjct: 301 SANAQIAKAEACQIEPISSLSWQALHENRLAPRPVQSALNAQKVCHQLGIKPGSLIRASW 360 Query: 280 KEGVRNIL 287 +E ++ ++ Sbjct: 361 QEQLQAMI 368 >gi|62737780|gb|AAX98196.1| sugar dehydratase/epimerase [Streptomyces aizunensis] Length = 317 Score = 246 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 14/293 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + +VIG G + +++ + + + VG D+DL P+ A+ PDV++N AA+ Sbjct: 13 RWMVIGATGMLGGEVAAQLTARGADPVGVGSADLDLTDPQAVAAAVADGGPDVVVNCAAW 72 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG---LSRTPIDEFSP 117 TAVD AE E E A ++N GAG +A+A + G +++STDYVF G + P E + Sbjct: 73 TAVDLAETEEEAALAVNGTGAGHLARACAATGSRLLHVSTDYVFRGAPADAGHPYAEDAE 132 Query: 118 TNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-RREISVV 175 +P YG++KL GE V + ++RT+W+Y F+ +M RLA+E R + VV Sbjct: 133 PDPATAYGRTKLVGERAVLAELPATAAVVRTSWLYGRDNGGFVHTMARLAREPGRTVDVV 192 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G P+ +A II++A + + G+FH T GG +W D A +F + Sbjct: 193 DDQHGQPSWTPDVAARIIELAALPADRA----HGVFHATG-GGRTTWYDLAREVFRLT-- 245 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI + A RPA+S L + A T + W+ + + L+ Sbjct: 246 -GQDPDRVRRIDSSGLRRAAVRPAWSVLGHDRWAATGLAPMRHWRTALADALM 297 >gi|325169026|ref|YP_004285772.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325052901|dbj|BAJ83235.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 148/290 (51%), Gaps = 3/290 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+ +L++ VGRP D P+ A+ + P +++N AA+T Sbjct: 6 ILITGASGQLGHALAARAPAAGLPARAVGRPGFDFDAPETIAATLAATDPALVVNAAAWT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + A+ N +G +A + G P I++STDYVFDG P E P PL Sbjct: 66 AVDAAEANADAAYRANRDGPATLATLCRARGNPLIHVSTDYVFDGTKGAPYTEADPIAPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AGEE V + + +ILRTAWV+S G NF +M+ A + VV DQ G Sbjct: 126 GVYGESKAAGEEAVLASGADAIILRTAWVFSATGKNFARTMIAAAHRLPTLRVVADQRGA 185 Query: 182 PTSALQ-IARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A + A L E GIFH T+ G SW FA I +A G P Sbjct: 186 PTAAEDLAEAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPL 244 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL ++ + + W++ I+ I Sbjct: 245 PDIVPIATADWPTPARRPADSRLDTTKLKDSFGLALPHWRDATARIVPAI 294 >gi|160942044|ref|ZP_02089359.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC BAA-613] gi|158434935|gb|EDP12702.1| hypothetical protein CLOBOL_06931 [Clostridium bolteae ATCC BAA-613] Length = 303 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G G++ + ++ + + VE++ +D+ + + P I+N A Sbjct: 9 KIWICGAGGRVGRKMTDILASRPVELLLTDADSVDITDSEAVMEYAHINRPHYIVNCAGL 68 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ED PE A+ +NA GA ++ AA + +STD VFDG S P EF P +P Sbjct: 69 TDAAACEDCPEEAYRVNALGARNLSVAARMGKSRLVQMSTDDVFDGRSLVPYTEFDPVSP 128 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSK+AGE V + N ++I+R++W++ GS +L +L +A + + I DQ Sbjct: 129 RTVYGKSKMAGENFVREFCNRHIIVRSSWIFGD-GSPYLERILEMAGQGKTIRAASDQMA 187 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A II++ + G++H+T G S + A+ E+ G Sbjct: 188 SPTGADGLAAKIIELMEH-------GEDGLYHVTGQ-GCCSRYELAK----EAVRLAGYQ 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + + RP+YS LD L ++ + WK + + Sbjct: 236 VPVEPVNASEDTLSSMRPSYSVLDNMMLRISNMRLLPHWKVMLEEYMKE 284 >gi|126173711|ref|YP_001049860.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125996916|gb|ABN60991.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 381 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 91/362 (25%), Positives = 144/362 (39%), Gaps = 82/362 (22%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI----------------IRVGRPDIDLLKPKDFASFF 46 ++ G Q+AQ+L + E+ + R +D+ + A+ F Sbjct: 27 VIITGAKSQLAQALLRVAADIGELALNSITSENTGAPLKLYALSRSQLDITDAANIAAVF 86 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P +IN AAY AVD AE + A +NA G +A+ G +++S+DYVF G Sbjct: 87 DQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPELLAQQCLQSGARLLHVSSDYVFGG 146 Query: 107 LS-------------------------------------RTPIDEFSPTNPLNIYGKSKL 129 + P E PL+ YGKSKL Sbjct: 147 HTVCGIAHAAERAVCDARESGVEQHQNPDLAPNSNPNHLPRPFVELDAPEPLSTYGKSKL 206 Query: 130 AGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI 188 GE KV + I+RT+W+Y G NF+ +ML L + + + V+ DQ G PT + + Sbjct: 207 LGELKVVAILGERATIVRTSWLYGQNGHNFVKTMLNLMRTQPSLQVIADQIGCPTWSDAL 266 Query: 189 ARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--PYSKVYRI 246 A+ I Q+ G+FH +A G SW +FA I ++ + I Sbjct: 267 AQVIWQLVVQ-------QCSGVFHYSAQ-GQCSWYEFACEIQRQALALNLLSLPVVIQPI 318 Query: 247 FTKQY--------PTKAHRPAYSCLDCSKLANTH----------NIRISTWKEGVRNILV 288 + Y A RP+YS L+ KL +T N+ W++ + +L Sbjct: 319 TSAHYAKQALNRGVGLAKRPSYSVLNSGKLRSTLVTNNTQSIPDNVEWQDWRQQLNCMLR 378 Query: 289 NI 290 + Sbjct: 379 RL 380 >gi|219852976|ref|YP_002467408.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c] gi|219547235|gb|ACL17685.1| dTDP-4-dehydrorhamnose reductase [Methanosphaerula palustris E1-9c] Length = 284 Score = 245 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 29/289 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G G++ + L + VG + + + + P +++N AA+T Sbjct: 23 RTLIFGGTGRLGRVLQCTYPSS---VAVGHT-VPITDKEAVRALVERVRPTLVLNAAAWT 78 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD E + A +N EG G IA A +G ++ STDYVF G E P +P+ Sbjct: 79 DVDGCEIDQTRALLVNGEGPGYIATACKEVGATLVHFSTDYVFSGDRMVYY-EDDPVSPI 137 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N+YG++K GEE+V + ++Y I+RT+ ++ +G NF+ ML+ + +++ ++V+ D+ + Sbjct: 138 NVYGRAKALGEERVMAGCHDYRIIRTSRLFGPYGENFVTLMLQRSADKKTVTVINDEVSS 197 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A + + ++ GI+H+T + G SW +FA + + Sbjct: 198 PTYIPDLASMVPAVI--------SAQPGIYHVT-NSGSCSWYEFAAAVIGNA-------- 240 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + Q +A RP S L CS+ + +W++ + L + Sbjct: 241 --VPVHAAQCRKRAPRPRSSVL-CSR----TLPPLRSWQQALGKYLQEL 282 >gi|111023268|ref|YP_706240.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1] gi|110822798|gb|ABG98082.1| dTDP-4-dehydrorhamnose reductase [Rhodococcus jostii RHA1] Length = 262 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 138/289 (47%), Gaps = 32/289 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K LV G GQ+ L + VG ++D+ P S V+IN AAY Sbjct: 3 KILVTGARGQLGGHLLRRAEATGIPARGVGSAELDITDPGAVNEQVEPGS--VVINCAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + + A I++STDYVF G TP + +PT P Sbjct: 61 TAVDAAESDEDTA--------------------RLIHVSTDYVFAGQGDTPYEVDAPTGP 100 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YG++KLAGE V + + ++RTAWVY+ GS+F+ +MLRL +ER + VV DQ G Sbjct: 101 ATAYGRTKLAGERAVHAALPSAHVVRTAWVYTGVGSDFVSTMLRLERERDTVDVVDDQVG 160 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A +A A++++A ++ + H T + G SW D A +F E+ G Sbjct: 161 SPTFAGDLADALLELAGRSDVDAP-----VLHAT-NSGRASWFDLARAVFEEA---GADP 211 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V + Q+ A RPA+S L A+ + W++ + + Sbjct: 212 ERVRPCTSAQFVRPAPRPAFSVLSGRAWADAGLTPLRPWRDALHAAVRE 260 >gi|212634463|ref|YP_002310988.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3] gi|212555947|gb|ACJ28401.1| DTDP-4-dehydrorhamnose reductase [Shewanella piezotolerans WP3] Length = 370 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 77/358 (21%) Query: 2 KCLVIGNNGQIAQSL----------------------------------SSMCVQDVEII 27 K +V G NGQ+AQSL + + E+ Sbjct: 6 KIMVTGGNGQLAQSLALIAHLSDAKVKASSFTRITADIVQALVNILPEVRNSLSEQDELH 65 Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 + +D+ F+ +PDV+IN AA+ AVD AE + E AF +N EG +A+ Sbjct: 66 LLSHRKLDICDSAAIDDAFMRVNPDVVINCAAFNAVDNAETDSESAFKVNFEGPKLLAER 125 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILR 146 G+ I+IS+D+VF G +P +E PL++YGKSKLAGE+ V + I+R Sbjct: 126 CKRDGVMLIHISSDFVFAGEKHSPYNEQDLPEPLSVYGKSKLAGEQAVRQVIASKAYIIR 185 Query: 147 TAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 T+W+YS G+NF+ +M +L + ++SV+ DQ+G+PT + A+ I LI+ + + Sbjct: 186 TSWLYSCQGNNFVHTMQKLFAAKEQVSVIADQYGSPTW----SEALAVIIFKLIKQKEAT 241 Query: 207 LRGI------------------------FHMTADGGPVSWADFAEYIFWES---AERGGP 239 RG+ +H A SW +FA+ I + Sbjct: 242 QRGVGLDASLGINLEPNFVGDSDSSDNLYHYAA-ANSCSWFEFAQQIQQLMLTDDKLIKT 300 Query: 240 YSKVYRIFTKQYPT-----KAHRPAYSCLDCSKLANTHNIR----IST-WKEGVRNIL 287 + ++ I T + A RP S L+ ++ +R + W++ ++ +L Sbjct: 301 HCRITPITTLSWQACHEQILAKRPNQSALNSQRVCQQLGVREGSLLKDKWQQQLKGML 358 >gi|25026899|ref|NP_736953.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium efficiens YS-314] gi|259506038|ref|ZP_05748940.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium efficiens YS-314] gi|23492179|dbj|BAC17153.1| putative dTDP-4-keto-6-deoxyglucose-3,5- epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium efficiens YS-314] gi|259166374|gb|EEW50928.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium efficiens YS-314] Length = 459 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 26/294 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G GQ+ +L ++ + V R D+D+ A + +S IIN AAYT Sbjct: 187 KVLVTGAGGQLGTALRAVFP---DAEFVSRQDLDITSDLSSARPWKQYS--AIINAAAYT 241 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 AVDKAE E A+++NA +A A + +++S+DYVFDG + E +P +P Sbjct: 242 AVDKAEGEGRADAWAVNATAVANLAAVARENNLTLVHVSSDYVFDGTAPGEYTEDAPLSP 301 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG++K AG+ +YV+ RT+WV G+ F+ +M L SVV DQ G Sbjct: 302 LGVYGQTKAAGDLAATGAPQHYVV-RTSWVIGDGGN-FVRTMKSLDARGITPSVVDDQIG 359 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 + IA I + G +++T G P SWAD A IF Sbjct: 360 RLSFTQDIAAGIKHLLDTRAA------YGTYNLTNSGEPASWADVARMIFR-------DP 406 Query: 241 SKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + T +Y A RP S LD KL T W+ + + L + Sbjct: 407 AAVTGVSTAEYFVDKQGAAPRPLNSRLDLGKLTAT-GFTAPDWRARLADYLEEL 459 >gi|153000000|ref|YP_001365681.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] gi|151364618|gb|ABS07618.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] Length = 381 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 91/362 (25%), Positives = 143/362 (39%), Gaps = 82/362 (22%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI----------------IRVGRPDIDLLKPKDFASFF 46 ++ G Q+AQ+L + E+ + R +D+ + A+ F Sbjct: 27 VIITGAKSQLAQALLRVAADIGELALNSITSENTGAPLKLYALSRSQLDITDTANIAAVF 86 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P +IN AAY AVD AE + A +NA G +A+ G +++S+DYVF G Sbjct: 87 DQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPELLAQQCWLSGARLLHVSSDYVFGG 146 Query: 107 LS-------------------------------------RTPIDEFSPTNPLNIYGKSKL 129 + P E PL+ YGKSKL Sbjct: 147 QAVCGIAHAAERAVCDARESGVEQHQNPDLAPNSNPNHLPRPFVELDAPEPLSTYGKSKL 206 Query: 130 AGE-EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI 188 GE + VA + I+RT+W+Y G NF+ +ML L + + + V+ DQ G PT + + Sbjct: 207 LGELKVVAVLGDGATIVRTSWLYGQNGHNFVNTMLNLMRTQPSLQVIADQIGCPTWSDAL 266 Query: 189 ARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG--PYSKVYRI 246 A+ I Q+ G+FH +A G SW +FA I ++ + I Sbjct: 267 AQVIWQLVVQ-------QCSGVFHYSAQ-GQCSWYEFACEIQRQALALNLLSLPVVIQPI 318 Query: 247 FTKQY--------PTKAHRPAYSCLDCSKLANTH----------NIRISTWKEGVRNILV 288 + Y A RP+YS L KL +T I W++ + +L Sbjct: 319 TSAHYAKQALNRGVNLAKRPSYSVLSSGKLRSTLVTLNALLMPEQIEWQDWRQQLNRMLR 378 Query: 289 NI 290 + Sbjct: 379 RL 380 >gi|288932726|ref|YP_003436786.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642] gi|288894974|gb|ADC66511.1| dTDP-4-dehydrorhamnose reductase [Ferroglobus placidus DSM 10642] Length = 290 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 86/304 (28%), Positives = 137/304 (45%), Gaps = 30/304 (9%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIR--------VGRP-DIDLLKPKDFASFFLSFS 50 M+ + G +G + L+ + E+ G+P DL Sbjct: 1 MRIFITGGSGLLGSKLAEIALEKGYEVYSGYNSHKPEFGKPVKFDLANSDSVVRAISEVK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VD+ E E ++A+ IN EG +A+ A +G +YISTDYVFDG R Sbjct: 61 PDVIVHSAALTDVDRCEVEKDLAYKINVEGTKIVAEMARKVGAYMVYISTDYVFDG-ERG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E T+P+N YG +KL GE+ Y ++ I RT +Y + NF L ++ Sbjct: 120 MYKEEDETHPINYYGYTKLLGEK----YCRDFCIARTCVIYGAKPASGKVNFALWLINKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + + +V DQF TPT +A+ + + A ++ G+FH+ VS +FA Sbjct: 176 ENGESVKIVTDQFITPTLNTNLAKMVFECAERKLK-------GVFHLAG-ATRVSRFEFA 227 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + I + G S + + A RP S LD SK N + + ++ ++ + Sbjct: 228 KEI---ARVFGLDDSLITPSRMDEINWIAKRPRDSSLDTSKARNLLDEKPYELRKALKTL 284 Query: 287 LVNI 290 I Sbjct: 285 KDEI 288 >gi|15827318|ref|NP_301581.1| dTDP-rhamnose modification protein [Mycobacterium leprae TN] gi|221229796|ref|YP_002503212.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae Br4923] gi|13092867|emb|CAC30260.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae] gi|219932903|emb|CAR70845.1| putative dTDP-rhamnose modification protein [Mycobacterium leprae Br4923] Length = 311 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 139/300 (46%), Gaps = 24/300 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLS---FSPDVIINP 57 + ++ G GQ+ +L++ +++ + D+ A DV++N Sbjct: 7 RLVITGAGGQLGSALAAQATAAGRDVLALTSSQWDITD-AAVAERMGRSALKKNDVVVNC 65 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SR 109 AAYT VD AE A+++NA G IA+A G I++STDYVF G + Sbjct: 66 AAYTNVDGAESNELAAYAVNATGPEYIARACRCAGAALIHVSTDYVFSGDFGSGANRVAP 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKE 168 P + T PL +YG+SKLAGE+ V + ++RTAWVY G +F+ M RLA Sbjct: 126 RPYEPTDETGPLGVYGRSKLAGEQAVLAAMPEATVVRTAWVYTGGTGKDFVAVMRRLAAG 185 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + VV DQ G+PT + +A A++Q+A D S+ G A+ G VS A Sbjct: 186 DGPVYVVDDQIGSPTYVVDLAAALLQVA-------DGSVHGSVLHAANEGEVSRFGQARA 238 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +F E G +V + T Q P A RPAYS L + + W+ + L Sbjct: 239 VFEEC---GADPLQVQPVSTAQNPRSAARPAYSALSGRQSVAAGLTPLRPWRSALVEALA 295 >gi|170290460|ref|YP_001737276.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174540|gb|ACB07593.1| dTDP-4-dehydrorhamnose reductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 302 Score = 244 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 125/305 (40%), Gaps = 29/305 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------------IDLLKPKDFASFFL 47 M LV G G + L + +D +I + +DLL + Sbjct: 1 MLILVTGGTGLLGWHLVNKLARDYRVIATHHINRPPSEDQRVEWVYLDLLDYEGIKRIIG 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+++I+ AAYT VD E + + AF +N ++A+A + IYISTDYVFDG Sbjct: 61 DLRPEIVIHTAAYTDVDGCEIDRKRAFDVNYLATKSLARACRGVCEYFIYISTDYVFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLR 164 R E P+N YG +KL GE + +++RT+ +Y F LS+L Sbjct: 120 ERGHYSEEDLPYPINYYGLTKLLGEVATTDLLDKSLVIRTSGIYGCSPGGKRGFALSLLE 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 E+ DQ+ +PT A +A I+++ + G H+ D S + Sbjct: 180 KLSRGDEVMAFTDQYLSPTYAPHLASNILKLLELRV-------NGFLHIAGD--RASRYE 230 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA + + E G V +A RP S LD K + + ++ ++ Sbjct: 231 FAIAV---ARELGADERLVKPSSMDTSSLRARRPRDSSLDTKKAKEELGLPFKSMRDCIK 287 Query: 285 NILVN 289 + + Sbjct: 288 EFIRD 292 >gi|228469869|ref|ZP_04054808.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas uenonis 60-3] gi|228308504|gb|EEK17292.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas uenonis 60-3] Length = 300 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 19/297 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFL-------SFSP 51 + +++G +GQ+ +SL+ + E++ +D + + Sbjct: 5 RIILLGASGQLGRSLTRELAERGNPYELVSYTHEQLDYTDTESVTRAIKLWEEQAIAHDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +I+N AA+T VD AED+ + + + +P I ISTDYVFDG TP Sbjct: 65 TMIVNCAAFTQVDLAEDKAQ--YRDLLALNALLPAQLAESRLPIIQISTDYVFDGCQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDATNPRSLYGRTKRQGELALLMHPTHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + + VV DQ G+PTSAL +ARAI +I + + S R A+ G SW D A Sbjct: 183 EGKALRVVNDQIGSPTSALSLARAICEIIDCY--DKERSFRTSLLHYANQGICSWYDLAH 240 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 241 EAIA-THVPTYDLSQLTPIPTAEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|226193872|ref|ZP_03789474.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pakistan 9] gi|225934177|gb|EEH30162.1| dTDP-4-dehydrorhamnose reductase [Burkholderia pseudomallei Pakistan 9] Length = 276 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 103/273 (37%), Positives = 139/273 (50%), Gaps = 7/273 (2%) Query: 24 VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA 83 +++ + R DL +P+ A PDV++N AAYTAVD AE + A IN E G Sbjct: 2 GQVVPLTREQADLGRPETLARIVEDAKPDVVVNAAAYTAVDAAETDGAAANVINGEAVGV 61 Query: 84 IAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV 143 +A A +G ++ STDYVFDG +P E PT P+N YG SKL GE VA +++ Sbjct: 62 LAAATKRVGGLFVHYSTDYVFDGTKPSPYIETDPTCPVNAYGASKLLGELAVAETGGDWL 121 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 RT WV++ G NFL +MLRLAKER E+ +V DQFG PT A IA + Sbjct: 122 TFRTTWVFAARGKNFLRTMLRLAKEREEMKIVADQFGAPTWARSIADGTAHALTTAMRER 181 Query: 204 DTS--LRGIFHMTADGGPVSWADFAEYIF--WESAERGGPY--SKVYRIFTKQYPTKAHR 257 G++HMT+ G SW FA+ I W +A P S++ I YP A R Sbjct: 182 AAGAFTSGVYHMTS-AGQTSWHGFADAIIASWRAAPGAAPLAVSRIVPIPASAYPVPAQR 240 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 PA S L L I + W+ V + ++ Sbjct: 241 PANSVLSNKALKERFGIELPDWRYAVGLCVNDL 273 >gi|313886198|ref|ZP_07819928.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica PR426713P-I] gi|312924377|gb|EFR35156.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica PR426713P-I] Length = 300 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 151/298 (50%), Gaps = 21/298 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFL-------SFSP 51 + +++G +GQ+ +S++ + E++ +D + + ++ Sbjct: 5 RIILLGASGQLGRSITRELAERDNPYELVSYTHEQLDYTDTETVSRAIKLWEEQSAAYDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +++N AA+T VD AED + + + +P I ISTDYVFDG TP Sbjct: 65 TMVVNCAAFTQVDLAED--PVHYRDLLALNALLPAQLAESHLPIIQISTDYVFDGKQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDRTNPQSLYGRTKRQGELALLMHPMHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA- 226 E + + VV DQ G+PTSA +ARAI +I + T + H AD G SW DFA Sbjct: 183 EGKSLRVVNDQIGSPTSAPSLARAICEIVACY-DTERTFRTPLLHY-ADRGICSWYDFAY 240 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E I E S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 241 EAIATHLPE--YDLSQLTPIPTDEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|167648866|ref|YP_001686529.1| dTDP-4-dehydrorhamnose reductase [Caulobacter sp. K31] gi|167351296|gb|ABZ74031.1| dTDP-4-dehydrorhamnose reductase [Caulobacter sp. K31] Length = 280 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 92/275 (33%), Positives = 140/275 (50%), Gaps = 6/275 (2%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 ++ V V+++ + R ++DL P ++ D+++N A +T VDKAE EPE A ++ Sbjct: 4 AAATVDHVDLVTLSRAEVDLTDPPAISAAIAGADCDLVLNCAGFTLVDKAEVEPEAARAV 63 Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 NA A+A+A G P I++STD VFDG P E PL++YG++KL GE V Sbjct: 64 NALAPLAMAQACARRGAPLIHLSTDCVFDGALDRPYCETDEARPLSVYGQTKLDGEVGVL 123 Query: 137 SYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 ++ V+LR +WV+S FG NF+ +ML LA+ R + VV DQ+G PT A +A I+ A Sbjct: 124 TW-ERSVVLRISWVFSRFGRNFVRTMLELARARDMLKVVDDQYGNPTDASALAGFILATA 182 Query: 197 HNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 +D G+FH T + G S A+ +++ I + +P A Sbjct: 183 GRWSSAEADDPAFGLFHFT-NTGTASRFALAQAAIERDPAA---RARLEPIAKRDFPELA 238 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 RP LDC KLA W+ V+ + Sbjct: 239 ARPLNGALDCGKLARVFGYTPEPWRPAVQRAADQL 273 >gi|198274918|ref|ZP_03207450.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135] gi|198272365|gb|EDY96634.1| hypothetical protein BACPLE_01077 [Bacteroides plebeius DSM 17135] Length = 305 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 80/307 (26%), Positives = 131/307 (42%), Gaps = 30/307 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG-RPDI------------DLLKPKDFASFF 46 K L+IG NG + L D +I PDI D+ ++ Sbjct: 4 KILIIGANGFTGRHLLHAFAPKTDWQITGCSLHPDICPPACGYRFIQTDITHEEEVEKLM 63 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+++ AA +A D AE A ++N E +A++ + I++STD+VF G Sbjct: 64 EEVQPDVVVHTAAMSATDYAETHHAEAQAVNVEAVRWLAQSCEKHHCRLIHLSTDFVFGG 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + E +P+N YG++K E+ VAS +Y I R VY +++ L Sbjct: 124 DTSRLYTEADTPSPVNYYGRTKWESEKVVASLCRDYAIARIVVVYGAPYPGQHGNIVSLV 183 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +EI V DQ+ TPT + + + ++ + GI+H+ G ++ Sbjct: 184 INRLQNHQEIRVADDQWRTPTYVGDVVQGVEKLIEQ-------PVCGIYHICG-GECMTV 235 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A + G S + + T K RP +S L K R T++EG Sbjct: 236 ADMA---LRTADTLGLDRSLILPVHTAAMQEKTPRPRFSGLSIEKARRELGYRPLTFEEG 292 Query: 283 VRNILVN 289 VR++L + Sbjct: 293 VRSMLQD 299 >gi|284162303|ref|YP_003400926.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631] gi|284012300|gb|ADB58253.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus profundus DSM 5631] Length = 291 Score = 243 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 138/298 (46%), Gaps = 30/298 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 MK + G +G + ++ + ++ + G DL P Sbjct: 1 MKVFITGGSGLLGSKVAEIALERGYNVYSGYNSHKPEFGEPVKFDLADPNSIVKVIDDVR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVII+ AA T VD+ E E E+A+ IN EG +A+ A +G +YISTDYVFDG R Sbjct: 61 PDVIIHSAALTDVDRCETEKELAYKINVEGTKIVAEMARKLGAFLVYISTDYVFDG-ERG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLRLA 166 E TNP+N YG +KL GE+ Y ++ I RT +Y +NF L ++ Sbjct: 120 MYKEEDETNPINYYGYTKLLGEK----YCQDFCIARTCVIYGARPASGKANFALWLINKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 ++ + ++ DQF TPT +A+ +++IA ++ +FH+ VS +FA Sbjct: 176 EKGECVKIITDQFITPTLNTNLAKMLLEIAERGLKE-------VFHLAG-ITRVSRFEFA 227 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + I + E G S + + A RP S LD SK A N + K+ ++ Sbjct: 228 KEI---AREFGLDESLIVPSKMDEMNWIAKRPRDSSLDVSKAARYLNEKPYDLKKALK 282 >gi|317479141|ref|ZP_07938281.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] gi|316904713|gb|EFV26527.1| RmlD substrate binding domain-containing protein [Bacteroides sp. 4_1_36] Length = 300 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K LVIG NG + + +V G DI D+ + F Sbjct: 5 KILVIGANGFTGRRILDDLSHNVFYQTTGCSLHDDICPHSGDYRFIRTDICNRQAVKKLF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+IN +A + D E A ++N +A+ ++ G I++STD+VF G Sbjct: 65 QEVQPDVVINTSALSVPDYCETHHAEADAVNITAVEHLAECCEAGGSRFIHLSTDFVFGG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + P E P+N YG +KL GE+++A+ +Y I+R VY ++L+L Sbjct: 125 DTDRPYTEEDIPAPVNYYGYTKLEGEKRIAAVCRDYAIVRVVVVYGAALPGQHGNVLQLV 184 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + E+ VV DQ+ TPT +++ + ++ + GI+H+ ++ Sbjct: 185 ANRLRNNEEVFVVSDQWRTPTFVGDVSQGVEKLISH-------PQNGIYHLCGSE-CLTI 236 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A + + G S + + TK+ K RP +S L K + T +EG Sbjct: 237 ADIA---YRVADVLGLNRSLIRPVTTKEMNEKTPRPRFSGLSIEKAHRELGYQPYTLEEG 293 Query: 283 VRNI 286 ++ + Sbjct: 294 IKLM 297 >gi|87307564|ref|ZP_01089708.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] gi|87289734|gb|EAQ81624.1| dTDP-4-dehydrorhamnose reductase [Blastopirellula marina DSM 3645] Length = 289 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 26/300 (8%) Query: 1 MK--CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK + G+ GQ+ L+ +++ R I+L P ++IN A Sbjct: 1 MKTTIAITGSAGQLGSELARQL--GSRAVQLSRAHINLASDASILDALGEIRPAILINCA 58 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTP 111 AYTAVDKAE + E F NAE + I + +STDYVFD S+ P Sbjct: 59 AYTAVDKAESDAEACFRANAEAVATMTGYCRERNIRLVQLSTDYVFDDYAADNAAGSQRP 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAKER 169 +DE +P +P IY +SKL GE A+ N +I+RT +Y NF+ +M+RLA Sbjct: 119 LDEQTPASPRGIYAQSKLQGEIAAAATPEN-LIVRTCGLYGGGPTMRNFVETMIRLAATN 177 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E+ VV DQ TP+ + +A A++++ G++H+T + +W + A+ + Sbjct: 178 PELRVVDDQRCTPSYCVDVAAAVLRLIEQ-------EATGLYHVT-NRESTTWFELAQTL 229 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 F + + + V I T +Y A RPAYS L K + + +W+ + L + Sbjct: 230 FSLTRK----PTVVQPISTAEYGAAAPRPAYSVLSLEKYSACVQREMPSWRNALERYLND 285 >gi|239907497|ref|YP_002954238.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio magneticus RS-1] gi|239797363|dbj|BAH76352.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio magneticus RS-1] Length = 293 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 142/292 (48%), Gaps = 15/292 (5%) Query: 2 KCLVIGN-NGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + + LS+ + ++ R +D + A F ++N A Sbjct: 9 RAIVLGGLTGLVGRPLSAAMEEAGFAVLPTTRTVLDPFDMEAVAREIEHFEATHVVNTVA 68 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVD AED+ + A+ +N + G +A+ G +++STD+VFDG P E N Sbjct: 69 YTAVDAAEDDADEAYRVNRDLPGRLARVCRKAGARLVHLSTDFVFDGAKGAPYAEDDAPN 128 Query: 120 PLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG SKLAGE + + + ILRTAW+Y NF+ ++L LAK R E+ VV DQ Sbjct: 129 PESVYGASKLAGERAILDSGLDAFQILRTAWLYGPGKKNFVATILGLAKTREELKVVADQ 188 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT L +A I +A T GIFH G SW D A E+ G Sbjct: 189 IGSPTYTLDLAGWIADLAR-------TEAAGIFHAVG-SGQASWCDLA----AEAVAASG 236 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I + YP KA RP YS LD +KLA W VR + + Sbjct: 237 LPCRVLSIPSDAYPQKAKRPPYSVLDNAKLAAAIGRGPRAWTITVREYVYEL 288 >gi|225848196|ref|YP_002728359.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643418|gb|ACN98468.1| dTDP-4-dehydrorhamnose reductase [Sulfurihydrogenibium azorense Az-Fu1] Length = 281 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 13/291 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NGQ+ S + + + + + D+ K + P+V+IN +A Sbjct: 1 MKFLVFGKNGQLGTEFSQYFEINNYTYLSLSKTECDITNFKLVEKIIKDYKPNVVINCSA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y VDKAE+E + AF +NA + I+ STDYVFDG + E N Sbjct: 61 YNLVDKAEEEFKEAFEVNAFAIKNLGLLCQEYKCFLIHYSTDYVFDGTKQDFYTEEDLPN 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+IY KSK AGE+ + +Y+I R +WVY NFL + + A + + D+F Sbjct: 121 PLSIYAKSKYAGEKFIKETLEHYLIFRVSWVYGKGKQNFLYKLNQWAATHSMLKIAVDEF 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PTS I ++ + G++H+T + G S ++++ E + Sbjct: 181 SVPTSTRTIVEITLKALKQGLT-------GLYHLT-NSGYASRYEWSK----EYLKLKQV 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +Y + + A RP +S + K++ N I W E ++ ++ + Sbjct: 229 DKLIYPAYQSDFNLPAKRPKWSVMSNQKISKILNTDIPLWNEELKLMVREM 279 >gi|309812119|ref|ZP_07705877.1| dTDP-4-dehydrorhamnose reductase [Dermacoccus sp. Ellin185] gi|308433806|gb|EFP57680.1| dTDP-4-dehydrorhamnose reductase [Dermacoccus sp. Ellin185] Length = 289 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 95/283 (33%), Positives = 142/283 (50%), Gaps = 15/283 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 LV+G G + Q L ++ + V ++ +G D+ + PDV++N AA+T Sbjct: 5 WLVLGGTGMLGQDLVALLQRRGVTVVALGSAGCDITDRAEVERVVAEQGPDVVVNCAAHT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE E AF++NA GA +A+AA S +++STDYVFDG TP D P +P Sbjct: 65 AVDAAETEEAAAFALNATGAFNVARAARSAAAQLVHVSTDYVFDGRGTTPYDVDHPQDPR 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG++K AGE V + + +++RTAW+Y G NF+ +ML LA +R + VV DQ G Sbjct: 125 SAYGRTKAAGEWAVRATHPDALVVRTAWLYGAHGPNFVATMLTLAGKRETLDVVADQIGQ 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT +A II + G +H T+ G SW D A+ F + G Sbjct: 185 PTWTGDLAETIIGLVEQECPG------GFYHGTS-SGQGSWFDLAQEAFRLT---GLDPE 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +V ++ + A RPAYS L + I W+ + Sbjct: 235 RVRPTTSEAFQRPAPRPAYSVL----ARSPRGPSIGDWRARLA 273 >gi|108798290|ref|YP_638487.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS] gi|119867386|ref|YP_937338.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS] gi|108768709|gb|ABG07431.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. MCS] gi|119693475|gb|ABL90548.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. KMS] Length = 287 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 142/294 (48%), Gaps = 18/294 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G G + + L++ Q ++ + D D+ A + V N AAY Sbjct: 4 RLVITGAGGMVGRILAAQARRQGRDVSALTSSDCDITDTAAVARAVAAGDVVV--NCAAY 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV----FDGLSRTPIDEFS 116 T VD+AE EPE A ++NA G G +A +G I++STDYV F G S P + Sbjct: 62 TDVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHPYEIDD 121 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 PL++YG++KLAGE V + ++RTAWVY G++F+ +M R A + VV Sbjct: 122 APAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGADTVDVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PTSA + A+++IA D +RG A+ G S D A +F Sbjct: 182 ADQIGSPTSAHDLVAALLEIA-------DGGVRGPLLHAANDGQASRFDQARAVFET--- 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + + + P A RPAYS L + A + W+E + + L Sbjct: 232 VGADPERVRPVGSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSALRE 285 >gi|148259625|ref|YP_001233752.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|148260220|ref|YP_001234347.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|146401306|gb|ABQ29833.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] gi|146401901|gb|ABQ30428.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium cryptum JF-5] Length = 301 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 108/290 (37%), Positives = 150/290 (51%), Gaps = 3/290 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+ +L++ +GRP D P+ A + P +++N AA+T Sbjct: 6 ILITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + AF N +G +A + GIP I++STDYVFDG P E P PL Sbjct: 66 AVDAAETSADAAFRANRDGPATLATLCRARGIPLIHVSTDYVFDGTKGAPYTETDPIAPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SK AGEE + + + +ILRTAWV+S G NF +M+ A+ + VV DQ GT Sbjct: 126 GVYGHSKAAGEEAILAAGADAIILRTAWVFSATGKNFARTMIAAARRLPALRVVADQRGT 185 Query: 182 PTSAL-QIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 186 PTAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPH 244 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL+ T + + WK+ I+ I Sbjct: 245 PDIIPIATADWPTPARRPADSRLDTTKLSQTFALALPHWKDATARIVPAI 294 >gi|326403406|ref|YP_004283487.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325050267|dbj|BAJ80605.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 242 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 109/290 (37%), Positives = 150/290 (51%), Gaps = 3/290 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+ +L++ +GRP D P+ A + P +++N AA+T Sbjct: 6 ILITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + AF N +G +A S GIP I++STDYVFDG P E P PL Sbjct: 66 AVDAAETSADAAFRANRDGPATLATLCRSRGIPLIHVSTDYVFDGTKGAPYTETDPIAPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SK AGEE + + + +ILRTAWV+S G NF +M+ A+ + VV DQ GT Sbjct: 126 GVYGHSKAAGEEAILAAGADAIILRTAWVFSATGKNFARTMIAAARRLPALRVVADQRGT 185 Query: 182 PTSAL-QIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 186 PTAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPH 244 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL+ T + + WK+ I+ I Sbjct: 245 PDIIPIATADWPTPARRPADSRLDTTKLSQTFALALPHWKDATARIVPAI 294 >gi|251771325|gb|EES51906.1| dTDP-4-dehydrorhamnose reductase [Leptospirillum ferrodiazotrophum] Length = 306 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 136/300 (45%), Gaps = 26/300 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV----EIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M +IG+ GQ+ L + + EI+ + RP+ DL P+ D++IN Sbjct: 10 MTIGLIGSRGQLGSDLLARAPRSGKHALEIVPLDRPEFDLTHPRSLER-IRKARFDLVIN 68 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG----LSRTPI 112 +AY AVD+AE E F +NA G +A+ G + STDYV G + P Sbjct: 69 TSAYNAVDRAEGEIRECFELNAFLPGELARTCREAGSALFHFSTDYVMSGGINEREQIPY 128 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----SIFGSNFLLSMLRLAK 167 E S PL++YG SK GE V S ++RT +Y G NF+ +ML+LA+ Sbjct: 129 SEESCPRPLSVYGLSKATGERLVLSSWERATVVRTCGLYGGKGSGQKGGNFVTTMLKLAR 188 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R + V+ D PTS +A + ++ + G++H+T + G +W DFA+ Sbjct: 189 AGRPLRVIDDCHVGPTSTWDLAEVLWRMIL------EGHPPGLYHLT-NAGRTTWYDFAK 241 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 IF + G ++V + ++Y A R YS L + I + + + L Sbjct: 242 KIFALT----GTEAEVTPVSLREYNPPAPRSPYSVLANDRARQQGLI-LRDIDSALEDYL 296 >gi|118618082|ref|YP_906414.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium ulcerans Agy99] gi|118570192|gb|ABL04943.1| dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD [Mycobacterium ulcerans Agy99] Length = 308 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 136/289 (47%), Gaps = 22/289 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G GQ+ L++ V+ +++ + D+ + DV+IN AAY Sbjct: 7 RLVIAGAAGQLGGVLAAQAVRAGRDVLAKTSSEWDITDAAATEEIIGTG--DVVINCAAY 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL--------SRTPI 112 T VD AE + A+++NA G +AKA G I++STDYVFDG P Sbjct: 65 TDVDSAESDEARAYAVNATGPENLAKACARAGAALIHVSTDYVFDGDHADLPDGAQPQPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERRE 171 + T P +Y +SK AGE V + + V++R+AWVY GS+F+ M RLA Sbjct: 125 EPGDKTAPQGVYARSKFAGERAVLAALPDAVVVRSAWVYTGGTGSDFVAIMRRLAAGEGP 184 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + VV DQ G+PT +A L+E +D +RG A+GG VS A +F Sbjct: 185 VDVVDDQTGSPTYVAD-------LAAALLEVADAGVRGRLLHAANGGAVSRFGLARAVFE 237 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 E G +V + T Q+P RP YS L + A + W+ Sbjct: 238 EC---GTDPQRVRPVSTAQFPRPVVRPGYSALGGRQWAAAGLTPLRPWR 283 >gi|41409478|ref|NP_962314.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398309|gb|AAS05930.1| RmlD [Mycobacterium avium subsp. paratuberculosis K-10] Length = 307 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 142/301 (47%), Gaps = 26/301 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAA 59 + ++ G GQ+ LS++ Q +++ + D+ P P DV+IN AA Sbjct: 4 RIVIAGAGGQLGGYLSALAAGQGRDVVALTSAQWDITDPAAAEHIV---RPGDVVINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTPI 112 YT VD AE + AF++N G G IA+A G +++STDYVF G P Sbjct: 61 YTDVDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVY-SIFGSNFLLSMLRLAKE 168 + P P +Y +SK+AGE V + + V++RTAWVY G +F+ M RLA Sbjct: 121 EPGDPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAG 180 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + VV DQ G+PT +A A++QI + + + H A+ G VS + A Sbjct: 181 EGPVQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARA 233 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +F E G ++V + T+ +P A RP YS L + A + W+ + L Sbjct: 234 VFEEC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALT 290 Query: 289 N 289 N Sbjct: 291 N 291 >gi|225374844|ref|ZP_03752065.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM 16841] gi|225213305|gb|EEG95659.1| hypothetical protein ROSEINA2194_00467 [Roseburia inulinivorans DSM 16841] Length = 285 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 18/291 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G GQI Q+++ + + + E++ D+D+ + F PD+IIN + Sbjct: 3 KIWVCGARGQIGQAVNDVVDKLEFEMLDTDVDDLDVTDTDEVLRFGEMNRPDIIINCSGM 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T + E+ P AF +NA GA +A A + + +STD VFDG S P EF TNP Sbjct: 63 TDISSCEENPSQAFKVNALGARNLAIVAAKMQAKMVQLSTDDVFDGKSTEPYTEFDITNP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V +T + I+R+ WVY + F+ L+ ++S+ DQFG Sbjct: 123 GTVYGKSKLAGENYVKEFTTKHFIVRSTWVYGKGQN-FINGFLKKVDAGEQLSIASDQFG 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA ++AR ++ + H TS G +H T + G S FA+ I + G Sbjct: 182 SPTSANELARFLLHLVH-------TSEYGTYHAT-NKGVCSRYAFAQEILKMT----GKT 229 Query: 241 SKVYRIFT--KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T + RPAY+ LD ++ W++ +R L Sbjct: 230 ASMQPVPTVMSDFSK--VRPAYAVLDNFIMSMVPIYDFPDWQDSLREYLEE 278 >gi|288916472|ref|ZP_06410849.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] gi|288352072|gb|EFC86272.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] Length = 269 Score = 241 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 129/261 (49%), Gaps = 17/261 (6%) Query: 28 RVGRPDIDLLKPKDFASFF-LSFSPD------VIINPAAYTAVDKAEDEPEIAFSINAEG 80 + R ++DL + P V+IN AA+T VD AE + + A+++NA G Sbjct: 6 GLTRSELDLSDAARVRAVIADQARPARVQGGLVVINTAAWTNVDGAESDEQGAYAVNAAG 65 Query: 81 AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 +A A G ++ISTDYVFDG + P + P P YG++KLAGEE V Sbjct: 66 PAHLAAACAQAGAVLVHISTDYVFDGAASKPYETTDPPGPRCAYGRTKLAGEEAVLELCP 125 Query: 141 NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 ++RTAWVY G NF+ ++ RLA+ER +++VV DQ G+PT + +A ++ + Sbjct: 126 GSYVVRTAWVYGRTGGNFVKTIARLARERDQLTVVADQHGSPTWSADLAAGLLDLVTA-- 183 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 G++H T GG +W FA I G +KV I T ++P A RPAY Sbjct: 184 ----RPTPGLYHCTG-GGETTWFGFARAIV---GALGQDPAKVVPISTAEFPRPAARPAY 235 Query: 261 SCLDCSKLANTHNIRISTWKE 281 S L + + W + Sbjct: 236 SVLSQRSWQDAGLRPLRPWDD 256 >gi|227549713|ref|ZP_03979762.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] gi|227078209|gb|EEI16172.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium lipophiloflavum DSM 44291] Length = 440 Score = 241 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 22/291 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + + E R + D+ P + + IIN AAY Sbjct: 166 KILVTGANGQLGRALRKVYSER-EAEFCTRAEFDITHPPA--RDWNEYR--AIINCAAYN 220 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE E A+++NA+ +A+ A + +++S+DYVFDGL T E +PL Sbjct: 221 DVNGAETERGTAWAVNADAVAELARIASEHDLTLVHVSSDYVFDGL-NTEHTEDELPSPL 279 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AGE + +YVI RT+WV+ + F+ +M RLA + SVV DQ G Sbjct: 280 SAYGASKSAGETAARATPRHYVI-RTSWVFGEGAN-FMDTMARLADKGVSPSVVADQRGR 337 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A I + S + G++++T+DG V + A +F G S Sbjct: 338 PTHADDLAHGIAHLL------STKAEYGVYNITSDGDAVGRDEIAMSVF---IGVGADPS 388 Query: 242 KVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V + T QY A RP S L K+ T W+ + L Sbjct: 389 DVTPVTTAQYAELNGPEAPRPKESTLSLDKIKGT-GFSPRNWRAALAIYLA 438 >gi|213023600|ref|ZP_03338047.1| dTDP-4-dehydrorhamnose reductase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 216 Score = 241 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 6/218 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPDI--DLLKPKDFASFFLSFSPDVIIN 56 M L+ G GQ+ L +I + + D PK A PDVI+N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AA+TAVDKAE EPE+A +NA AIAKAA+ IG ++ STDYVF G P E Sbjct: 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANEIGAWVVHYSTDYVFPGTGDIPWQETD 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 T+PLN+YGK+KLAGE+ + Y+I RT+WVY+ G+NF +MLRLAKER+ +SV+ Sbjct: 121 ATSPLNVYGKTKLAGEKALQDNCPKYLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 DQ+G PT A +A + + + G++H+ Sbjct: 181 DQYGAPTGAELLADCTAHAIRVTLNKPEVA--GLYHLV 216 >gi|332299683|ref|YP_004441604.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica DSM 20707] gi|332176746|gb|AEE12436.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas asaccharolytica DSM 20707] Length = 300 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 150/298 (50%), Gaps = 21/298 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFL-------SFSP 51 + +++G +GQ+ +S++ + E+ +D + + ++ Sbjct: 5 RIILLGASGQLGRSITRELAERDNPYELASYTHEQLDYTDTETVSRAIKLWEEQAVAYDW 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +++N AA+T VD AED + + + +P I ISTDYVFDG TP Sbjct: 65 TMVVNCAAFTQVDLAED--PVHYRDLLALNALLPAQLAESHLPIIQISTDYVFDGKQGTP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSMLRLAK 167 E TNP ++YG++K GE + + + ++++RT W+++ +G NF+ +MLRLA+ Sbjct: 123 YHEEDRTNPQSLYGRTKRQGELALLMHPTHPAEQHLVIRTQWLWAPWGHNFVRTMLRLAR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA- 226 E + + VV DQ G+PTSA +ARAI +I + T + H AD G SW DFA Sbjct: 183 EGKSLRVVNDQIGSPTSAPSLARAICKIIACY-DTERTFRTPLLHY-ADRGICSWYDFAY 240 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 E I E S++ I T +YPT A RPAYS L ++ + I W++ ++ Sbjct: 241 EAIATHLPE--YDLSQLTPIPTAEYPTAAERPAYSVLATDRITACYGITPPQWQDELQ 296 >gi|126433957|ref|YP_001069648.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS] gi|126233757|gb|ABN97157.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. JLS] Length = 287 Score = 241 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 18/294 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + ++ G G + + L++ Q ++ + D D+ A + V N AA+ Sbjct: 4 RLVITGAGGMVGRILAAQARRQGRDVSALTSSDCDITDTAAVARAVAAGDVVV--NCAAF 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV----FDGLSRTPIDEFS 116 T VD+AE EPE A ++NA G G +A +G I++STDYV F G S P + Sbjct: 62 TDVDRAESEPERAHAVNAVGPGNLAAVCARVGAGLIHVSTDYVFSGDFGGASPHPYEIDD 121 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVV 175 PL++YG++KLAGE V + ++RTAWVY G++F+ +M R A + VV Sbjct: 122 APAPLSVYGRTKLAGERAVLDALPHGYVVRTAWVYEGADGTDFVAAMRRKALGADTVDVV 181 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQ G+PTSA + A+++IA D +RG A+ G S D A +F Sbjct: 182 ADQIGSPTSAHDLVAALLEIA-------DGGVRGPLLHAANDGQASRFDQARAVFET--- 231 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G +V + + + P A RPAYS L + A + W+E + + L Sbjct: 232 VGADPERVRPVGSDRVPRPAPRPAYSALSGAGSAACGLTALRPWREALVSALRE 285 >gi|212704490|ref|ZP_03312618.1| hypothetical protein DESPIG_02546 [Desulfovibrio piger ATCC 29098] gi|212672057|gb|EEB32540.1| hypothetical protein DESPIG_02546 [Desulfovibrio piger ATCC 29098] Length = 315 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 16/288 (5%) Query: 2 KCLVI-GNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K LV+ G G + Q+L + + + + R D D+L + S +PDV+ + Sbjct: 31 KALVLEGRTGLLGQALRHVLLGRGWSVESLERSDGDILDADFLQARLDSCAPDVVFSSLG 90 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPT 118 + VD AED P+ N +A + G ++ S+ VF G +P E T Sbjct: 91 WNTVDDAEDHPDEVLLYNRTLPHTLACLLKTRGQGHLVHFSSGLVFSGQHGSPWREEDAT 150 Query: 119 NPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PLN+YGK++LAGE+ V ++RT W++ NF+ +L R I++V D Sbjct: 151 APLNVYGKTRLAGEQAVLQTLPERACVVRTGWLFGPGKRNFVDDILNACHRRDSITIVDD 210 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + G+PT +L +A I +A G++H + G +W + A E+ Sbjct: 211 RTGSPTYSLDLALWSIMLAERQAT-------GLWH-AVNSGQATWCELAC----EAVGLA 258 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 G +V I + Q+P KA RP Y+ LDC KL+ + W + +R Sbjct: 259 GNECRVEPIPSSQWPQKAPRPPYTVLDCGKLSEYLGMHPRPWTQALRE 306 >gi|291387772|ref|XP_002710405.1| PREDICTED: methionine adenosyltransferase II, beta isoform 1 [Oryctolagus cuniculus] Length = 334 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSDAVHHIIHEFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVNASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|255036982|ref|YP_003087603.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] gi|254949738|gb|ACT94438.1| dTDP-4-dehydrorhamnose reductase [Dyadobacter fermentans DSM 18053] Length = 300 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 31/302 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPD-------------IDLLKPKDFASFF 46 K L+ G+NG + Q L ++ +E I R + +D+ P+ Sbjct: 5 KILITGSNGLLGQKLVALLVSKAHIETIATARGENRLPFQTGYRYVEMDITDPESVDRVL 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P V+I+ AA T VD+ E E + + +N + A I ++STD+VFDG Sbjct: 65 DVERPHVLIHTAAMTNVDQCEIEKDACWKLNVTATETLVAACAKYKIFLEHVSTDFVFDG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSM 162 S P E NP++ YG SK A E+ V S + I RT VY I +L + Sbjct: 125 TS-GPYREQDVPNPVSFYGWSKYAAEKAVMSSDIEWAIARTVLVYGIAHDMSRSNIILWV 183 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +E + I VV DQF TPT A +A IA D +GI+H++ Sbjct: 184 KKSLEEGKAIKVVTDQFRTPTLAEDLALGCFLIA-------DQEAKGIYHISGKDFLTP- 235 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A + G S + + A RP + +K +N +++EG Sbjct: 236 YEMA---LATAEYFGLDASLISPTDASAFTQPARRPPRTGFKLTKASNVLGYEPHSFREG 292 Query: 283 VR 284 + Sbjct: 293 IA 294 >gi|294507877|ref|YP_003571935.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] gi|294344205|emb|CBH24983.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber M8] Length = 307 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 32/305 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q+L Q+ +++ R D +D+ +P D A F Sbjct: 5 RVLITGANGLLGQALVHRLSQNREYDVLATARDDAPRFEDGSCGYAPLDVTQPDDVAQIF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F+PDV++N AA T V + ++ A+++NA +AK + G + +STD+VF+G Sbjct: 65 EDFTPDVVVNCAAMTDVGRCDEHRSEAWAVNARAVKTLAKHCRTSGARLVQVSTDFVFNG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYS----IFGSNFLLS 161 R P DE + +P+N YG++KLAGE V N+ I+RT +Y + SN +L Sbjct: 125 -KRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLLYGTGRDLRRSNIVLW 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + + +V DQ TPT +A I ++ H+ GI+H++ VS Sbjct: 184 VADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLHH-------EATGIYHVSG-ADMVS 235 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + A + + E G S V + + + RP + K + + Sbjct: 236 VYELACAV---AQEFGLDASLVEPVPSSFFEDAVERPPRTGFVIDKARDELDYDPRPLDA 292 Query: 282 GVRNI 286 G+R++ Sbjct: 293 GLRDV 297 >gi|163748894|ref|ZP_02156146.1| dTDP-4-dehydrorhamnose reductase [Shewanella benthica KT99] gi|161331668|gb|EDQ02473.1| dTDP-4-dehydrorhamnose reductase [Shewanella benthica KT99] Length = 288 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 154/292 (52%), Gaps = 12/292 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+IG +GQ+AQ+L + + +GR D+D+ + + ++IIN AAYT Sbjct: 6 RALIIGKHGQLAQALIASKPNKIIATAMGRDDVDIGSLESIMAAIELTRAELIINTAAYT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE + + AFS+N +GAG IA AA I++STDYVF+G + + Sbjct: 66 QVDLAESQQDQAFSVNRDGAGNIALAAKMTQTRLIHLSTDYVFNGQQSKAYCIDDKPSAI 125 Query: 122 NIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG SKLAGE+ V A+ I+R++W+YS FG+NF+ +MLRL + ++SV+ DQ Sbjct: 126 NVYGASKLAGEQAVIAAEYEEACIVRSSWLYSPFGTNFVKTMLRLMTLQPKLSVIDDQTS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA ++ + I ++ I+H + D G SW FA I + G Sbjct: 186 CPTSAFELGQFIWSLSQQAKLAP------IYHWS-DTGTASWYQFALAIQDIALNLGKLD 238 Query: 241 SK--VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ + I + Q+ + A RP +S LD + + W+E + +L + Sbjct: 239 TRIPIEPISSSQFSSAASRPKFSLLDITASRQI--MTAKPWQENLTAVLQQL 288 >gi|169630693|ref|YP_001704342.1| dTDP-rhamnose modification protein RmlD [Mycobacterium abscessus ATCC 19977] gi|169242660|emb|CAM63688.1| Possible DTDP-rhamnose modification protein RmlD [Mycobacterium abscessus] Length = 282 Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 17/291 (5%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 ++ G GQ+ L + +D+ + + D D+ + D++IN AAYT Sbjct: 2 LVITGAGGQLGTHLIARAKLRDLPVRALTSSDWDITRDGTPDGVVAEG--DIVINCAAYT 59 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL----SRTPIDEFSP 117 AVD AE++ A+++NAEGA +A+A +G I+ISTDYVFDG P Sbjct: 60 AVDAAEEDESRAYAVNAEGAERVARACRDVGARLIHISTDYVFDGEFGDAGPRPYRPGDA 119 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 T P +Y ++K+AGE V + ++RTAWVY+ +F+ M RLA + VV D Sbjct: 120 TAPQGVYARTKVAGELAVHGVLPSAQVVRTAWVYTGVNGDFVGVMRRLAAGEGPVRVVTD 179 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT A + +A L++ + + +R F A G V+ ++A+ +F G Sbjct: 180 QTGSPTYA-------VDLAEALLDLAASDVREPFLHAAGSGHVNRFEWAKAVFEL---VG 229 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 S++ + +P A RPAY+ LD A+ R+ W++ + L Sbjct: 230 ADASRLQPCLSVDFPRPAPRPAYTALDGDHWADAGLPRLRPWRDALAEALA 280 >gi|291387774|ref|XP_002710406.1| PREDICTED: methionine adenosyltransferase II, beta isoform 2 [Oryctolagus cuniculus] Length = 323 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSDAVHHIIHEFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVNASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|327400446|ref|YP_004341285.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6] gi|327315954|gb|AEA46570.1| dTDP-4-dehydrorhamnose reductase [Archaeoglobus veneficus SNP6] Length = 289 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 89/303 (29%), Positives = 141/303 (46%), Gaps = 31/303 (10%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIR--------VGRP-DIDLLKPKDFASFFLSFS 50 M+ + G +G + ++ + E+ G+P IDL P Sbjct: 1 MRIFITGGSGLLGHRIAEIALEKGYEVYSGYCHNHPSAGKPVKIDLSNPVSIFETIKDAK 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VDK E E E+AF IN EG AIA+A + IY+STDYVFDG Sbjct: 61 PDVIMHTAALTNVDKCEKEKELAFRINVEGTKAIAEAVRKLNSFLIYVSTDYVFDGRK-G 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E TNP+N YG +KL GE+ Y ++ I RT +Y + NF+L ++ Sbjct: 120 MYREEDETNPVNYYGHTKLLGEQ----YCKDFCIARTCVIYGAKPASGKVNFVLWLIDKL 175 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + ++ +V DQ+ TPT +A+ +++IA ++ G+FH+ VS +FA Sbjct: 176 RNGEKVRIVTDQYITPTLNTNLAKMMLEIAEKGLK-------GVFHLAG-ATRVSRFEFA 227 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 E + G + + ++ A RP S LD SK + + ++ ++ + Sbjct: 228 E---TLADVFGLDKTLITPSKMEEINWVAVRPKDSSLDTSKAVKLLDEKPYALEKALK-V 283 Query: 287 LVN 289 L Sbjct: 284 LKE 286 >gi|256371534|ref|YP_003109358.1| dTDP-4-dehydrorhamnose reductase [Acidimicrobium ferrooxidans DSM 10331] gi|256008118|gb|ACU53685.1| dTDP-4-dehydrorhamnose reductase [Acidimicrobium ferrooxidans DSM 10331] Length = 286 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 17/292 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G GQ+ + L + E++ + R +D+ + + P I+N AA Sbjct: 4 RIVVLGAGGQLGRRLVRAFERTSAAEVVGLDRRALDVTERVAVHGAVDALRPRWIVNAAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 TAVD E E E A +NA + +AA+ G +STDYVFDG + P E N Sbjct: 64 MTAVDACEREVERAVRLNALAVRWLVEAAERAGARVCQVSTDYVFDGTATRPYTEADQPN 123 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG +KL GE ++ ++ V RT+W+ S L ++ RL + + V DQ Sbjct: 124 PMSVYGLTKLQGERELRPGIDSCV--RTSWLMSADDRCMLGTIDRLRRGPGPLRFVEDQV 181 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G+P+ A +A I+++ + G+ H+T D G SW D A G Sbjct: 182 GSPSFADDVALGIVELVRR-------EVTGVIHVTND-GQASWYDVAREALR---AFGDD 230 Query: 240 YSKVYRIFTKQYPTK--AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +V I T Q A RPA+S L A + W+E + + Sbjct: 231 PHRVEPIPTTQLAGSFVAPRPAFSVLAGVVRAAVGLEPLRPWQEALGAAVSE 282 >gi|149726118|ref|XP_001503384.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Equus caballus] Length = 323 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ G ++LL P V Sbjct: 19 RVLVTGATGLLGRAVYREFKQNNWHAFGCGYRRARPKFEQVNLLDSDAVRHIVHDVQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + + +AK A +IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASRLNVDASRNLAKEAAAIGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTIMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGALRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|118431352|ref|NP_147762.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1] gi|116062675|dbj|BAA80165.2| dTDP-4-dehydrorhamnose reductase [Aeropyrum pernix K1] Length = 300 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 81/305 (26%), Positives = 129/305 (42%), Gaps = 32/305 (10%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRV------------GRPDIDLLKPKDFASFFL 47 MK LV G G + +L + + + ++L P F Sbjct: 1 MKLLVTGGTGLLGYNLVQQLLKKGYSVYPTYNKNTPFKLAGARWSKVNLEDPSQLTQLFR 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD +I+ AAYT VD E E A+ IN + +A+ A G IY+STDYVFDG Sbjct: 61 DIKPDAVIHTAAYTDVDGCELHRERAYRINFLASMTVARLAARHGSLLIYVSTDYVFDGD 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN--NYVILRTAWVYSIFG---SNFLLSM 162 E NP+N YG SKL GE S + N +++R + +Y NF +++ Sbjct: 121 K-GMYREEEAPNPINYYGLSKLLGEVATLSAMDKENVLVVRVSGLYGYSPTGKRNFGINV 179 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L E+ DQ+ +PT ++ LI+ + +RG+ H+ G +S Sbjct: 180 LEKLLRGEEVRAFYDQYLSPTYTY-------FLSRRLIDVLEREIRGVLHLA--GERLSR 230 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 +FA+ I + G + I K+ A RP S LD + + + + +E Sbjct: 231 LEFAQLI---AKVLGADAELIKPISMKEANLPARRPRDSSLDTTMAKK-LGLELPSQEES 286 Query: 283 VRNIL 287 V++ + Sbjct: 287 VKHFV 291 >gi|19527234|ref|NP_598778.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Mus musculus] gi|81880218|sp|Q99LB6|MAT2B_MOUSE RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|13097444|gb|AAH03457.1| Methionine adenosyltransferase II, beta [Mus musculus] gi|56206760|emb|CAI25422.1| methionine adenosyltransferase II, beta [Mus musculus] gi|148700381|gb|EDL32328.1| methionine adenosyltransferase II, beta, isoform CRA_a [Mus musculus] Length = 334 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 30 RVLITGATGLLGRAVYKEFQQSNWHTVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRTGIKESL 319 >gi|255027553|ref|ZP_05299539.1| hypothetical protein LmonocytFSL_16515 [Listeria monocytogenes FSL J2-003] Length = 230 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 15/242 (6%) Query: 46 FLSFSPDVIINPAAYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 L P+ II+ AA+T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVF Sbjct: 1 MLDLKPEWIIHCAAFTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVF 60 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG + TNPLN YG +KLAGE+ + ++RT+WV+ +G+NF+ SML+ Sbjct: 61 DGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFGKYGNNFVYSMLK 120 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 LA+ +E+ VV DQ G PT +A I + GI+ + + G +W + Sbjct: 121 LAETHKELKVVNDQLGRPTYTYDLADFIRFVIEK------NPAYGIYQFS-NSGTATWFE 173 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA I + V + ++P KA RP S + K+ I TW++ + Sbjct: 174 FATEILKD------KDVTVNPCTSDEFPQKAERPKTSIMSLEKVEK-LGFNIPTWQDALV 226 Query: 285 NI 286 Sbjct: 227 RF 228 >gi|326402833|ref|YP_004282914.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] gi|325049694|dbj|BAJ80032.1| dTDP-4-dehydrorhamnose reductase [Acidiphilium multivorum AIU301] Length = 301 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 107/290 (36%), Positives = 148/290 (51%), Gaps = 3/290 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G +GQ+ +L++ +GRP D P+ A + P +++N AA+T Sbjct: 6 ILITGASGQLGHALAARAPAAGLPARAIGRPGFDFDAPETIARALAAADPALVVNAAAWT 65 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + AF N +G +A S GIP I++STDYVFDG P E P PL Sbjct: 66 AVDAAETSADAAFRANRDGPATLATLCRSRGIPLIHVSTDYVFDGTKGAPYTETDPIAPL 125 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG SK AGEE + + + +ILRTAW++S G NF +M+ A+ + VV DQ G Sbjct: 126 GVYGHSKAAGEEAILAAGADAIILRTAWIFSATGKNFARTMIAAARRLPALRVVADQRGA 185 Query: 182 PTSAL-QIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT+A + A L E GIFH T+ G SW FA I +A G P+ Sbjct: 186 PTAAEDLADAILAIAARILAEGWQPGFAGIFHATS-AGDTSWHGFATEILALAARHGTPH 244 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + I T +PT A RPA S LD +KL T + + WK+ I+ I Sbjct: 245 PDIIPIATADWPTPARRPADSRLDTTKLNQTFALALPHWKDATARIVPAI 294 >gi|218664471|ref|NP_001136304.1| methionine adenosyltransferase 2 subunit beta [Sus scrofa] gi|198448579|gb|ACH88506.1| methionine adenosyltransferase 2beta [Sus scrofa] Length = 334 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLITGATGLLGRAVYKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIYDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A +IG IYISTDYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAIGAFLIYISTDYVFDG-KNPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDMPSPLNPYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNPPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|301782821|ref|XP_002926826.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like isoform 2 [Ailuropoda melanoleuca] Length = 334 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ G RP ++LL + F P V Sbjct: 30 RVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A SIG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAASIGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDC+KL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCTKLETLGIGQRTPFRIGIKESL 319 >gi|269219066|ref|ZP_06162920.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 848 str. F0332] gi|269211213|gb|EEZ77553.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 848 str. F0332] Length = 339 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 133/282 (47%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G + Q L++ V+D ++I V ID+ P V AA Sbjct: 59 MRWLIAGAKGMLGQDLTARVVKDGHDLIAVDIDGIDITDPASVREIVKDVDVVVN--VAA 116 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE++ AF++NA G +A+ IG ++ISTDYVF G + +P E Sbjct: 117 FTAVDAAEEKEAAAFTVNATGPEILARRCREIGARFVHISTDYVFSGDATSPYREDGLLE 176 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P YG++K AGE V T++Y+I+RTAW+Y G F +M L++ +SVV D+ Sbjct: 177 PKGAYGRTKAAGEWAVRCNTDDYLIVRTAWLYGAGGKCFPKTMRDLSQTHETLSVVTDEV 236 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT + +A I+++ + GI+H T+ G +W F I A G Sbjct: 237 GQPTWTVDLADLIVRLVDA------EAPTGIYHGTS-SGKTNWHGFTREIV---ASIGKD 286 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + A RP YS L L I WKE Sbjct: 287 PDMVKETTAAAFKRPAPRPHYSVLGHDALERIGVEPIGDWKE 328 >gi|239628292|ref|ZP_04671323.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518438|gb|EEQ58304.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 297 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 141/289 (48%), Gaps = 14/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G NG++ + L+ + + VE++ +D+ D + P IIN A Sbjct: 3 KIWICGANGRVGRKLTGLLRSEPVELLLTDVDSVDITVSGDVMEYAGMNRPHFIINCAGL 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T + + + EPE+AF +NA GA ++ AA + STD VFDG SR P EF P Sbjct: 63 TDLARCQREPELAFKVNALGARNLSVAARMGKARLVQFSTDDVFDGDSREPYTEFDTPGP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 IYGKSKLAGE V + + ++I+R++W++ GS +L +LR+A++ + I DQ+ Sbjct: 123 QTIYGKSKLAGENFVREFCSRHIIIRSSWIFGA-GSPYLGQILRMAEQGQVIHAAADQYA 181 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A ++A +++ ++ G++H+T G S +FA E+ G Sbjct: 182 APTGAEELAEKTVELMYH-------GEDGLYHVTGQ-GSCSRYEFAR----EAVRLSGTG 229 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + V + A RP+YS LD L + + WK + + Sbjct: 230 APVMQARGGDDDLNALRPSYSVLDNMMLRISGIALLPDWKVMLEAYMEQ 278 >gi|313482787|ref|NP_001186203.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Mus musculus] gi|26344854|dbj|BAC36076.1| unnamed protein product [Mus musculus] gi|74187532|dbj|BAE36716.1| unnamed protein product [Mus musculus] gi|148700382|gb|EDL32329.1| methionine adenosyltransferase II, beta, isoform CRA_b [Mus musculus] Length = 323 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 19 RVLITGATGLLGRAVYKEFQQSNWHTVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRTGIKESL 308 >gi|56206762|emb|CAI25424.1| methionine adenosyltransferase II, beta [Mus musculus] Length = 320 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 16 RVLITGATGLLGRAVYKEFQQSNWHTVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 75 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 76 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 134 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 135 EEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 194 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 195 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 251 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 252 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRTGIKESL 305 >gi|301782819|ref|XP_002926825.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like isoform 1 [Ailuropoda melanoleuca] Length = 323 Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ G RP ++LL + F P V Sbjct: 19 RVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A SIG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAASIGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDC+KL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCTKLETLGIGQRTPFRIGIKESL 308 >gi|112983992|ref|NP_001037747.1| methionine adenosyltransferase 2 subunit beta [Rattus norvegicus] gi|81883481|sp|Q5U2R0|MAT2B_RAT RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|55249791|gb|AAH85899.1| Similar to methionine adenosyltransferase II, beta [Rattus norvegicus] gi|149052293|gb|EDM04110.1| rCG33311, isoform CRA_b [Rattus norvegicus] Length = 334 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 30 RVLITGATGLLGRAVYKEFQQSNWHAVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|304409585|ref|ZP_07391205.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|307303943|ref|ZP_07583696.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] gi|304352103|gb|EFM16501.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|306912841|gb|EFN43264.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] Length = 393 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 92/374 (24%), Positives = 147/374 (39%), Gaps = 94/374 (25%) Query: 3 CLVIGNNGQIAQSLSSMCV----------------------QDVEIIRVGRPDIDLLKPK 40 L+ G Q+AQ+L + +E+ + R +D+ Sbjct: 27 VLITGAKSQLAQALLRIAANIGELALNSNANTSTNISANTGAPLELYALSRSQLDITDAA 86 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 + A F + P +IN AAY AVD AE + A +NA G +A+ G +++S+ Sbjct: 87 NIAVVFDQYRPSWVINCAAYNAVDAAEHDAIEANRVNALGPELLAQQCLLSGARLLHVSS 146 Query: 101 DYVFDGLS-------------------------------------------RTPIDEFSP 117 DYVF G + P E Sbjct: 147 DYVFGGQAVCEIAHAAERAVGDARESGVEQHQNPDSASNSNPNPNPNQVHLPRPFVELDA 206 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 PL+ YG SKL GE++V + + V I+RT+W+Y G NF+ +ML L + + + V+ Sbjct: 207 PEPLSAYGTSKLLGEQRVVAVLGDCVTIVRTSWLYGQDGHNFVNTMLNLMRTQPSLQVIA 266 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G PT + +A+ I Q+ G+FH +A G SW +FA I +S Sbjct: 267 DQIGCPTWSDALAKVIWQLVVQ-------QCSGVFHYSAQ-GQCSWYEFACEIQRQSIAL 318 Query: 237 GG--PYSKVYRIFTKQYP--------TKAHRPAYSCLDCSKLANTH----------NIRI 276 + I + Y + A RP+YS L+ KL +T N+ Sbjct: 319 HLLSLPVGILPITSADYAKQALNRGISLAKRPSYSVLNSGKLRSTLVTNNTQSIPNNVEW 378 Query: 277 STWKEGVRNILVNI 290 W++ + +L + Sbjct: 379 QDWRQQLNCMLRRL 392 >gi|281341458|gb|EFB17042.1| hypothetical protein PANDA_016526 [Ailuropoda melanoleuca] Length = 313 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ G RP ++LL + F P V Sbjct: 9 RVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDFQPHV 68 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A SIG IYIS+DYVFDG P Sbjct: 69 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAASIGAFLIYISSDYVFDGT-NPPYR 127 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 128 EEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 187 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 188 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 244 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDC+KL + + ++ G++ L Sbjct: 245 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCTKLETLGIGQRTPFRIGIKESL 298 >gi|227505632|ref|ZP_03935681.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium striatum ATCC 6940] gi|227197785|gb|EEI77833.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium striatum ATCC 6940] Length = 447 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 21/288 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + R D D+ P + +S IIN AAY Sbjct: 175 KVLVTGANGQLGRALRQVLPH---AEFCAREDFDICNPP--ERHWRHYS--TIINCAAYN 227 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE + A+ +NA +A+ A + +++S+DY+FDG + E +PL Sbjct: 228 DVNGAESDRARAWEVNALAPAKLARIAVGNNLTLVHVSSDYIFDGSQKI-HTEEETPSPL 286 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK AGE AS + I+RT+WV+ G+NF+ +M RLAK+ E V+ DQ G Sbjct: 287 SLYGASKAAGE-ASASVAPKHYIVRTSWVFGD-GNNFVKTMARLAKQGVEPKVIHDQHGR 344 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I + + GI+++++ G V + A F G S Sbjct: 345 PTFAEDLAKGIAHLLKV------QAPYGIYNISSGGDSVGRDEIAMATF---IGLGHDPS 395 Query: 242 KVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V+ + ++Y A RP S LD SK+ T W+ + L Sbjct: 396 EVHPVSAEEYGDEPAQRPLESTLDLSKIEAT-GFSPMNWRAAIALYLA 442 >gi|217974037|ref|YP_002358788.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] gi|217499172|gb|ACK47365.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] Length = 389 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 90/371 (24%), Positives = 146/371 (39%), Gaps = 92/371 (24%) Query: 3 CLVIGNNGQIAQSLSSMCVQ----------------DVEIIRVGRPDIDLLKPKDFASFF 46 L+ G Q+A++L + +E+ + R +D+ + A+ F Sbjct: 27 VLITGAKSQLAEALLRIAANIGELALNSNASTNTSIPLELYALSRSQLDITDAANIAAVF 86 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P +IN AAY AVD AE + A +NA G +A+ G +++S+DYVF G Sbjct: 87 DQYRPSWVINCAAYNAVDAAEHDAIEAHRVNALGPELLAQQCLLSGARLLHVSSDYVFGG 146 Query: 107 LS---------------------------------------------RTPIDEFSPTNPL 121 + P E PL Sbjct: 147 QAVCEIAHAAERVVCDARESGVEQHQNPDSASNSNSNPNPNPNQVHLPRPFVELDAPEPL 206 Query: 122 NIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 + YG SKL GE++V + + I+RT+W+Y G NF+ +ML L + + + V+ DQ G Sbjct: 207 SAYGTSKLLGEQRVVAVLGDCATIVRTSWLYGQDGHNFVNTMLNLMRTQSSLQVIADQIG 266 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP- 239 PT + +A+ I + G+FH +A G SW +FA I ++ Sbjct: 267 CPTWSDALAKVIWLLVMQ-------QRSGVFHYSAQ-GQCSWYEFASEIQRQALALNLLS 318 Query: 240 -YSKVYRIFTKQYPTK---------AHRPAYSCLDCSKLANTH----------NIRISTW 279 + I + Y TK A RP+YS L+ KL +T I W Sbjct: 319 QPVDIQPITSADY-TKQALNRGVNLAKRPSYSVLNSGKLRSTLATNNVLSMPEQIEWQDW 377 Query: 280 KEGVRNILVNI 290 ++ + +L + Sbjct: 378 RQQLNCMLRRL 388 >gi|120602749|ref|YP_967149.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris DP4] gi|120562978|gb|ABM28722.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio vulgaris DP4] Length = 291 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 15/289 (5%) Query: 2 KCLVIGN-NGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V+G G + QSL ++ + + VGR D+D+L + A F SP + N A Sbjct: 6 RAVVLGGRTGLLGQSLVLALRNGGWDAVPVGRDDVDVLDAERLADFIDKASPQAVFNTVA 65 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE+ + A +N ++ + G+ +++STD+VF+G TP + Sbjct: 66 WTQVDLAEEHEQEAAQLNRALPASLGRIVRGTGMHLVHLSTDFVFNGRKTTPYTTDDTPD 125 Query: 120 PLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P ++YG +KLAGE + S +N ++RTAW++ NF+ ++L L + +I VV DQ Sbjct: 126 PASVYGTTKLAGETALLSIAPDNCCVVRTAWLFGPGRRNFVQTILGLCAAKDDIQVVHDQ 185 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+PT + +A +++A G+FH+ + G SW + A E+ G Sbjct: 186 TGSPTYTVDLAAGCVRLAELRAT-------GLFHVV-NAGQASWCELA----SEAVHLAG 233 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + KV+ I +K +P KA RPAYS LD S+ I W + +R+ + Sbjct: 234 LHCKVHAITSKDWPQKAARPAYSVLDTSRFTEVTGIVPRPWPQALRDYI 282 >gi|62901974|gb|AAY18938.1| DKFZp564B246 [synthetic construct] Length = 358 Score = 238 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 54 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 113 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 114 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 172 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 173 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 232 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 233 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 289 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 290 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 343 >gi|329963485|ref|ZP_08301014.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] gi|328528656|gb|EGF55620.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides fluxus YIT 12057] Length = 317 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K L+IG NG + + +++ G DI D+ F Sbjct: 22 KVLIIGANGFTGRRVLDDLSRNIAYRVTGCSLHDDICPGSGDYHFVRTDICDNNALEKLF 81 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + PDV++N +A + D E E A +IN +A+ I++STD+VF G Sbjct: 82 EAVRPDVVVNTSALSVPDYCETHHEEADAINITAVSRLAEYCRMHDSRFIHLSTDFVFSG 141 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + E P+N YG +KL GE+++ + NY I+R VY ++L+L Sbjct: 142 NTDRLYTEEDTPGPVNYYGHTKLEGEKRITAICENYAIVRVVVVYGAALPGQHGNILQLV 201 Query: 167 KER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 +R EI VV DQ+ TPT I++ + ++ + GI+H+ ++ Sbjct: 202 ADRLRNNEEIFVVSDQWRTPTYVGDISQGVEKLINR-------PRNGIYHICGSD-CLTI 253 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A + + G S + + TK+ K RP +S L K + T +EG Sbjct: 254 ADMARRV---ADLLGLDRSLIRPVTTKEMNEKTPRPRFSGLSIEKACRELGYQPHTLEEG 310 Query: 283 VRNI 286 ++ + Sbjct: 311 MKIM 314 >gi|134102912|ref|YP_001108573.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] gi|291008002|ref|ZP_06565975.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] gi|567875|gb|AAA68212.1| thymidine diphospho-4-keto-6-deoxyglucose 3, 5-epimerase [Saccharopolyspora erythraea NRRL 2338] gi|133915535|emb|CAM05648.1| dTDP-4-dehydrorhamnose reductase [Saccharopolyspora erythraea NRRL 2338] Length = 307 Score = 238 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 145/290 (50%), Gaps = 17/290 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSF---------SP 51 LV G GQ+ L + + G ++D+ + A SF P Sbjct: 8 VLVPGGRGQVGSELRRIVSGWSGALVHAPGSGELDVTDAEAVADAVDSFAETARDSDLRP 67 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 V++N AAYTAVD AE+EP+ + +IN GA A+A A G+P ++ISTDYVF G + P Sbjct: 68 -VVVNAAAYTAVDAAEEEPDRSAAINVAGAAALADACGRRGVPLLHISTDYVFPGDATRP 126 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 + T P YG++KL GE V ++RTAWVY G NF+ +M RL ER Sbjct: 127 YEPDDETGPRTSYGRTKLDGERAVLDSGARAWVVRTAWVYGAGGKNFVKTMARLESERDT 186 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 +SVV DQ G PT A +A ++++A + E R + H +GG SW +FA +F Sbjct: 187 LSVVDDQVGCPTWAADLAAGLLELAGRVAERKGPEQR-VLHCV-NGGQSSWFEFARAVF- 243 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE G +V ++++P A RPAYS L + + W+E Sbjct: 244 --AELGADPERVRPCSSEEFPLPAPRPAYSVLSGRAWEASGLTPLRHWRE 291 >gi|149052294|gb|EDM04111.1| rCG33311, isoform CRA_c [Rattus norvegicus] Length = 323 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 19 RVLITGATGLLGRAVYKEFQQSNWHAVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPSPLNLYGKTKLDGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|114051822|ref|NP_001039991.1| methionine adenosyltransferase 2 subunit beta [Bos taurus] gi|122135265|sp|Q29RI9|MAT2B_BOVIN RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|88954131|gb|AAI14152.1| Methionine adenosyltransferase II, beta [Bos taurus] gi|296485092|gb|DAA27207.1| methionine adenosyltransferase 2 subunit beta [Bos taurus] Length = 334 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLITGATGLLGRAVYKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIYDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E+ P+ A +N + +G +AK A +IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENHPDAASQLNVDASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPNPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVERLEESAVTIMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCS+L + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVVGAQRPRNAQLDCSRLETLGIGQRTPFRIGIKESL 319 >gi|13528837|gb|AAH05218.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 323 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNTQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|73954080|ref|XP_536439.2| PREDICTED: similar to methionine adenosyltransferase II, beta isoform 1 [Canis familiaris] Length = 604 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ G RP ++LL + F P V Sbjct: 300 RVLITGATGLLGRAVYKEFKQNNWHAFGCGFRRARPKFEQVNLLDSEAVHHIIHDFQPHV 359 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A IG IYIS+DYVFDG P Sbjct: 360 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAALIGAFLIYISSDYVFDGT-NPPYR 418 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 419 EEDVPSPLNLYGKTKLEGEKAVLENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 478 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 479 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 535 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDC+KL + + ++ G++ L Sbjct: 536 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCTKLETLGIGQRTPFRIGIKESL 589 >gi|303328202|ref|ZP_07358640.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. 3_1_syn3] gi|302861532|gb|EFL84468.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. 3_1_syn3] Length = 296 Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 136/271 (50%), Gaps = 14/271 (5%) Query: 19 MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINA 78 + + ++ +GR D +LL+ D + N A+T VD AED PE A +N Sbjct: 22 LTERGWQVETLGRADGNLLEMPFLEERLAKADADAVFNAVAWTQVDDAEDHPEDALLMNR 81 Query: 79 EGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 A+A+ ++G ++ STD+VF G +TP E +P +YG++KLAGEE V Sbjct: 82 TLPDALARVLKALGRGHLVHFSTDFVFSGPHQTPWREDDAPHPAGVYGRTKLAGEEAVLR 141 Query: 138 -YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 ++RTAW++ NF+ ++L ++R ISVV DQFG+PT +L +A+ +A Sbjct: 142 VLPERSCVVRTAWLFGPGRKNFVDTILAACQKRDAISVVHDQFGSPTYSLDLAQWSTSLA 201 Query: 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 + GI+H + G SW + A E+ ++ I + Q+P KA Sbjct: 202 -------EKEATGIWH-AVNSGQASWCELAC----EAIALTAGPCRLEPIASSQWPQKAQ 249 Query: 257 RPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 RP YS LD SKL+ + W + +R+ L Sbjct: 250 RPVYSVLDTSKLSEFLGKKPRPWPQALRDFL 280 >gi|332238967|ref|XP_003268676.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Nomascus leucogenys] Length = 334 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|119581924|gb|EAW61520.1| methionine adenosyltransferase II, beta, isoform CRA_d [Homo sapiens] Length = 333 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 29 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 88 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 89 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 147 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 148 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 207 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 208 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 265 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 318 >gi|11034825|ref|NP_037415.1| methionine adenosyltransferase 2 subunit beta isoform 1 [Homo sapiens] gi|109079666|ref|XP_001089658.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 5 [Macaca mulatta] gi|114603285|ref|XP_518083.2| PREDICTED: methionine adenosyltransferase II, beta isoform 5 [Pan troglodytes] gi|114603287|ref|XP_001146686.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 4 [Pan troglodytes] gi|296192700|ref|XP_002744186.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Callithrix jacchus] gi|74719662|sp|Q9NZL9|MAT2B_HUMAN RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=DTDP-4-keto-6-deoxy-D-glucose 4-reductase; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|75040945|sp|Q5R4E0|MAT2B_PONAB RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|6815285|gb|AAF28477.1| methionine adenosyltransferase regulatory beta subunit [Homo sapiens] gi|12052852|emb|CAB66599.1| hypothetical protein [Homo sapiens] gi|55733390|emb|CAH93376.1| hypothetical protein [Pongo abelii] gi|117646290|emb|CAL38612.1| hypothetical protein [synthetic construct] gi|119581921|gb|EAW61517.1| methionine adenosyltransferase II, beta, isoform CRA_a [Homo sapiens] gi|189065444|dbj|BAG35283.1| unnamed protein product [Homo sapiens] Length = 334 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|325265267|ref|ZP_08131992.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] gi|324029446|gb|EGB90736.1| dTDP-4-dehydrorhamnose reductase [Clostridium sp. D5] Length = 293 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 12/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K V G G++ + M +DVE++ ++D+ + F P+ IIN A Sbjct: 7 KIWVAGAAGRVGTMIHDMLDMRDVELLETDVEELDITHAAEVNLFGSRNRPNTIINCAGM 66 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V + E E A+ +NA GA ++ A I I ISTD +F EF NP Sbjct: 67 TDVQECEKHIEQAYKVNALGARNLSAIARKIDARIIQISTDDIFWDKRYRSFHEFDVPNP 126 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKLAGE V ++I+R++WVY + G NF+ S++ AK I D + Sbjct: 127 RTVYGKSKLAGENFVKELAPKHLIIRSSWVYGMEGHNFVNSIIEQAKNGGCIEAAVDDYA 186 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PTSA +++R I+++ GI+H GG S + AE I G Sbjct: 187 CPTSAKELSRVILRLIKE-------EQEGIYHAVC-GGSCSRYELAEEILRLM---GKTD 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + P Y+ LD L WKE ++ L Sbjct: 236 VRLEAKKMVELQSSIDGPEYTILDNMMLRMCEIETPVPWKEALKEYLQE 284 >gi|197102462|ref|NP_001126137.1| methionine adenosyltransferase 2 subunit beta [Pongo abelii] gi|55730484|emb|CAH91964.1| hypothetical protein [Pongo abelii] Length = 323 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|332238969|ref|XP_003268677.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Nomascus leucogenys] Length = 323 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|33519455|ref|NP_877725.1| methionine adenosyltransferase 2 subunit beta isoform 2 [Homo sapiens] gi|109079662|ref|XP_001089537.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 4 [Macaca mulatta] gi|114603281|ref|XP_001146485.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Pan troglodytes] gi|296192702|ref|XP_002744187.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Callithrix jacchus] gi|6006498|emb|CAB56837.1| dTDP-4-keto-6-deoxy-D-glucose 4-reductase [Homo sapiens] gi|37182512|gb|AAQ89058.1| MAT2B [Homo sapiens] gi|119581922|gb|EAW61518.1| methionine adenosyltransferase II, beta, isoform CRA_b [Homo sapiens] Length = 323 Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|312129515|ref|YP_003996855.1| dtdp-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM 17132] gi|311906061|gb|ADQ16502.1| dTDP-4-dehydrorhamnose reductase [Leadbetterella byssophila DSM 17132] Length = 296 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 29/300 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------------IDLLKPKDFASFFL 47 MK L+ G+NG + Q L +II R + +D+ P+ + + Sbjct: 1 MKILITGSNGLLGQKLVQQLAGKGDIIATARGENRLPLSDGYRYRSLDITDPEAVNAVII 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD II+ AA T VD+ E + E + +N + KAA+ G +++STD++FDG Sbjct: 61 EETPDAIIHTAAMTNVDQCETDKEECWKLNVHATEYLVKAAEKTGSYFLHVSTDFIFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSML 163 P E + NP++ YG SK A E+ V S + N+ I RT VY I +L + Sbjct: 120 KEGPYAEDAEPNPISFYGWSKFAAEKVVQSSSLNWSIARTVLVYGIAHDMSRSNIILWVK 179 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + + I VV DQ+ TPT A +A I + + GI++++ ++ Sbjct: 180 GSLEAGKTIKVVNDQWRTPTLAEDLAAGCILMVEKKAQ-------GIYNISGKD-LLNPY 231 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + G + + + Q+ A RP + K ++ EG+ Sbjct: 232 QMAVM---TADYFGLDKNLIQEVNGTQFTQTARRPPKTGFILDKPIKDLGYSPRSFTEGI 288 >gi|330689348|pdb|2YDX|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689349|pdb|2YDX|B Chain B, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689350|pdb|2YDX|C Chain C, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689351|pdb|2YDX|D Chain D, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit gi|330689352|pdb|2YDX|E Chain E, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit Length = 315 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 4 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 63 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 64 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 122 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 123 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 182 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 183 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 240 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 293 >gi|254776666|ref|ZP_05218182.1| RmlD [Mycobacterium avium subsp. avium ATCC 25291] Length = 302 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 26/299 (8%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 ++ G GQ+ +S++ Q +++ + D+ P P DV+IN AAYT Sbjct: 1 MIAGAGGQLGGYVSALAAGQGRDVVALTSAQWDITDPAAAERIV---RPGDVVINCAAYT 57 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTPIDE 114 VD AE + AF++N G G IA+A G +++STDYVF G P + Sbjct: 58 DVDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEP 117 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVY-SIFGSNFLLSMLRLAKERR 170 P P +Y +SK+AGE V + + V++RTAWVY G +F+ M RLA Sbjct: 118 GDPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEG 177 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G+PT +A A++QI + + + H A+ G VS + A +F Sbjct: 178 PVQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARAVF 230 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++V + T+ +P A RP YS L + A + W+ + L N Sbjct: 231 EEC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTN 286 >gi|126290742|ref|XP_001369996.1| PREDICTED: similar to methionine adenosyltransferase regulatory beta subunit isoform 1 [Monodelphis domestica] Length = 334 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ + G ++LL F P V Sbjct: 30 RALITGATGLLGRAVYKEFEKNNWHAVGCGYSRARPRFEQVNLLDTHAVHDIIQDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAGIGAFLIYISSDYVFDGT-NPPYT 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D +++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTNVKDVASVCRQLAEKRM--LDPTIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + + T A RP + L+CSKL N + + ++ G++ L Sbjct: 266 ---ADAFNLPNSHLRPV-TDSPVLGAPRPRNAQLNCSKLENLGIGQRTPFRVGIKESL 319 >gi|149641928|ref|XP_001513330.1| PREDICTED: similar to Methionine adenosyltransferase II, beta, partial [Ornithorhynchus anatinus] Length = 313 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q+ + G RP ++LL F P V Sbjct: 9 RALITGATGLLGRAVYKEFEQNNWHAVGCGFSRARPKFEQVNLLDNNAVRDIIQDFQPHV 68 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N +G +AK A IG IYIS+DYVFDG P Sbjct: 69 IVHCAAERRPDVVENQPDAASQLNVAASGNLAKEAAGIGAFLIYISSDYVFDGT-NPPYR 127 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 128 EDDVPNPLNLYGKTKLEGEKAVLENNVGAAVLRIPVLYGEVEKLEESAVTIMFDKVQFSN 187 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D S++G +H + + + A I Sbjct: 188 KSANMDHWQQRFPTNVKDVASVCRQLAEKRM--LDPSIKGTYHWSGNEQMTK-YEMACAI 244 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 245 ---ADAFNLPSSHLRPI-TDSPVVGALRPRNAQLDCSKLETLGIAQRTPFRVGIKESL 298 >gi|45219849|gb|AAH66645.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 334 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLEILGIGQRTPFRIGIKESL 319 >gi|83816254|ref|YP_445966.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] gi|83757648|gb|ABC45761.1| dTDP-4-dehydrorhamnose reductase [Salinibacter ruber DSM 13855] Length = 307 Score = 236 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 32/305 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q+L Q+ +++ R D +D+ +P D A F Sbjct: 5 RVLITGANGLLGQALVHRLSQNREYDVLATARDDAPRFEDGSCGYAPLDVTQPDDVAQIF 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F+P+V++N AA T V + ++ A+++NA +AK + G + +STD+VF+G Sbjct: 65 EDFTPNVVVNCAAMTDVGRCDEHRSEAWAVNARAVKTLAKHCRTSGARLVQVSTDFVFNG 124 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYS----IFGSNFLLS 161 R P DE + +P+N YG++KLAGE V N+ I+RT +Y + SN +L Sbjct: 125 -KRGPYDEQARPDPVNYYGRTKLAGENAVREAGRANWAIVRTVLLYGTGRDLRRSNIVLW 183 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + + +V DQ TPT +A I ++ H+ GI+H++ VS Sbjct: 184 VADQLSQGESLHIVDDQHRTPTHVDDLADGIERLLHH-------EATGIYHVSG-ADMVS 235 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + A + + E G S V + + + RP + K + + Sbjct: 236 VYELAGAV---AQEFGLDASLVEPVPSSFFEDAVERPPRTGFVIDKARDELDYDPRPLDA 292 Query: 282 GVRNI 286 G+R++ Sbjct: 293 GLRDV 297 >gi|118465938|ref|YP_883372.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104] gi|118167225|gb|ABK68122.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium avium 104] Length = 302 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 26/299 (8%) Query: 4 LVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 ++ G GQ+ +S++ Q +++ + D+ P P DV+IN AAYT Sbjct: 1 MIAGAGGQLGGYVSALAADQGRDVVALTSAQWDITDPAAAERIV---RPGDVVINCAAYT 57 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-------LSRTPIDE 114 VD AE + AF++N G G IA+A G +++STDYVF G P + Sbjct: 58 DVDGAESDEAGAFAVNEAGPGHIARACARAGARLLHVSTDYVFGGESPAGAPDRPRPYEP 117 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVY-SIFGSNFLLSMLRLAKERR 170 P P +Y +SK+AGE V + + V++RTAWVY G +F+ M RLA Sbjct: 118 GDPVAPQGVYARSKVAGERAVLAALPDPAQGVVVRTAWVYTGGTGKDFVAVMRRLAAGEG 177 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G+PT +A A++QI + + + H A+ G VS + A +F Sbjct: 178 PVQVVDDQIGSPTYVGDLAAALLQIVDDRVPGP------VLH-AANEGAVSRFEQARAVF 230 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E G ++V + T+ +P A RP YS L + A + W+ + L N Sbjct: 231 EEC---GADPARVRPVGTEHFPRPAPRPTYSALGSRESAAAGLRPLRPWRPALVAALTN 286 >gi|126290739|ref|XP_001370026.1| PREDICTED: similar to methionine adenosyltransferase regulatory beta subunit isoform 2 [Monodelphis domestica] Length = 323 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ + G ++LL F P V Sbjct: 19 RALITGATGLLGRAVYKEFEKNNWHAVGCGYSRARPRFEQVNLLDTHAVHDIIQDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAGIGAFLIYISSDYVFDGT-NPPYT 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EDDTPNPLNLYGKTKLQGEKAVLENNVGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D +++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTNVKDVASVCRQLAEKRM--LDPTIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + + T A RP + L+CSKL N + + ++ G++ L Sbjct: 255 ---ADAFNLPNSHLRPV-TDSPVLGAPRPRNAQLNCSKLENLGIGQRTPFRVGIKESL 308 >gi|62205265|gb|AAH93030.1| Methionine adenosyltransferase II, beta [Homo sapiens] Length = 334 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EGDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|311113106|ref|YP_003984328.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931] gi|310944600|gb|ADP40894.1| dTDP-4-dehydrorhamnose reductase [Rothia dentocariosa ATCC 17931] Length = 478 Score = 236 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 94/298 (31%), Positives = 146/298 (48%), Gaps = 23/298 (7%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G +GQ+ + L Q++ V R +DL P+ + + F S +IN AAYT Sbjct: 188 LLIVGASGQLGRELVRQLTAQNIPFEAVDRDRLDLGTPEKWRNTFRWRSYRAVINAAAYT 247 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFS 116 AVD AE PE A++ NA G A+A + +P +++STDYVFDG Sbjct: 248 AVDNAET-PEGRREAWAANAHGVAALASVCEEANLPLVHVSTDYVFDGNLPVGQEYSVEH 306 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG SK AGE A+ + +LRT+WV G NF+ +M LA+ + +VV Sbjct: 307 PIAPLSVYGASKAAGESA-ATAWRKHYLLRTSWVVGE-GKNFVATMASLAERGVDPAVVA 364 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT +A A + + + G +H++ G ++WAD A ++ + Sbjct: 365 DQWGRPTFTQDLAGAALHLLFT------GAPYGTYHVSNSGEVITWADLARAVYTGT--- 415 Query: 237 GGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V T++Y A RPA S LD SKL ++ + L + Sbjct: 416 GHDAARVSNTTTEEYFANAQVFAPRPANSALDLSKLIAA-GFTPRDHRDALAEYLHQL 472 >gi|218258294|ref|ZP_03474696.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii DSM 18315] gi|218225637|gb|EEC98287.1| hypothetical protein PRABACTJOHN_00351 [Parabacteroides johnsonii DSM 18315] Length = 295 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 129/303 (42%), Gaps = 29/303 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPD-----------IDLLKPKDFASFFL 47 K LVIG NG + + + E VG PD +D+ F Sbjct: 3 KILVIGANGFAGRRILDKLSSNGECEVVGCSLHPDIQPGEKHTFVRVDMNDYPAVEVLFD 62 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDV+IN +A + D E E A++IN +A + G I++STD+VFDG Sbjct: 63 HVCPDVVINCSALSVPDYCEQHREEAYAINVAAVENLAHCCEQQGSRFIHLSTDFVFDGK 122 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 S E PLN YG +K GE+ VA NY + R VY ++L+L K Sbjct: 123 SDRLYTEEDMPAPLNYYGLTKYQGEQAVARNCRNYAVARVVVVYGKALPGQHGNILQLVK 182 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 R +EI VV DQ+ TPT IA + ++ + + GI+H+ G +S A Sbjct: 183 NRLEAGQEIRVVSDQYRTPTWVADIADGVEKLVY-------SGNSGIYHICG-GEYLSIA 234 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + A + + +S + + T++ RP S L K R T +EG+ Sbjct: 235 EMA---YRVADYFKLDHSLICPVTTEEMKEATPRPRNSGLSIDKAKLELGYRPHTLEEGL 291 Query: 284 RNI 286 R + Sbjct: 292 REM 294 >gi|24373221|ref|NP_717264.1| dTDP-4-dehydrorhamnose reductase [Shewanella oneidensis MR-1] gi|24347447|gb|AAN54708.1|AE015611_6 dTDP-4-dehydrorhamnose reductase [Shewanella oneidensis MR-1] Length = 328 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 143/319 (44%), Gaps = 39/319 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQD---VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 L+ G + Q+A++L + + + +D+ A F PD +IN AA Sbjct: 11 VLLTGAHSQLAKALIRTHLNGGLVFNLHPLTHAALDISDKYSVAEVFAQVKPDWVINCAA 70 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD----GLSRTPIDEF 115 Y AVDKAE + A+ +N+ G +A G ++IS+DYVF G+ + E Sbjct: 71 YNAVDKAETAVDEAYRVNSLGPELLATECALTGARLVHISSDYVFSGLLTGVEANALSET 130 Query: 116 SPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAK---ERRE 171 +PL++YGKSKLAGE+ V +++RTAW+Y + G NF+ +MLRL + + Sbjct: 131 VTPSPLSVYGKSKLAGEQAVQRILGERAIVIRTAWLYGVDGHNFVKTMLRLMAATPDAQP 190 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + V+ DQ G+PT +A I Q+ G+FH G SW +FA I Sbjct: 191 LFVIDDQIGSPTWVDALASLIWQLMLR-------GESGLFHYAGQ-GQCSWYEFAAEIQQ 242 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAH----------RPAYSCLDCSKLANTHN------IR 275 ++ V I T A RP+YS L+ +KL +T I+ Sbjct: 243 QALALKLLKKAVPIIATDSLSYAAKALEKGNVLAQRPSYSALNSAKLRDTLGKDNLAAIQ 302 Query: 276 IS----TWKEGVRNILVNI 290 W+ + +L + Sbjct: 303 CPEVWQDWRVQLNCMLNAL 321 >gi|260061271|ref|YP_003194351.1| spore coat polysaccharide synthesis dTDP-4-dehydrorhamnose reductase [Robiginitalea biformata HTCC2501] gi|88785403|gb|EAR16572.1| spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose reductase) [Robiginitalea biformata HTCC2501] Length = 258 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 135/263 (51%), Gaps = 12/263 (4%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 +V G +GQ+ +S+ + EI + + + +D+ + ++ F +P+ IN AA+ Sbjct: 4 VIVTGADGQLGKSIQARIGSYDEINGVFLSKESLDITRVEEIRKRFKEHAPEYCINTAAF 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD+AE + A +NA GA +A+A + I++STDYVFDG NP Sbjct: 64 TEVDEAEVAEDKAMEVNACGAENLARACAEFRVILIHLSTDYVFDGSKPHGYRPTDKPNP 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG+SK GE+++ + Y I+RT+W+YS + NF ++L + + V Q G Sbjct: 124 INAYGRSKWEGEKRIGKCLDRYFIIRTSWLYSEYPPNFFTTILNRLNKNENLEVTDQQRG 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A+ I+++ SD GI H T DG P++W +FA I ++ Sbjct: 184 CPTKAGNLAKYILELIT-----SDDQDFGIRHFT-DGEPMTWYEFALRI--KNRYAPDST 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCL 263 SK+ R Y + A RP S L Sbjct: 236 SKIRR--GNNYRSFAKRPECSIL 256 >gi|297625251|ref|YP_003687014.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921016|emb|CBL55554.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 494 Score = 235 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 20/295 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +GQ+ ++L + + + V +++ ++ S DVI+N AA+ Sbjct: 199 RVLVTGAHGQLGRALMAQLPDAGFLPVGVDLDKLNIADRASVDAYDWST-VDVIVNAAAW 257 Query: 61 TAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 T VD AE A++ NA G +A+ A G+ ++IS++Y FDG R P E Sbjct: 258 TDVDGAETAQGRPRAWAANATGPANLARVATEHGLTLVHISSEYTFDGT-RAPHREDEMP 316 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG+SK G+ VA+ +Y++ RT+WV G NF+ +M+ LA VV DQ Sbjct: 317 SPLGVYGQSKAGGDAAVAATPRHYLV-RTSWVVGE-GKNFVRTMVDLAGRGIAPKVVDDQ 374 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T +A II + + G ++++ +G P+SWA A+ +F S G Sbjct: 375 VGRLTFTTDLAAGIIHLLRHGAA------WGTYNLSNEGTPLSWAAVAKRVFALS---GH 425 Query: 239 PYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T +Y A RPA S LD +++ T R + +E + + + Sbjct: 426 DPQDVSPISTAEYFAGKDAAPRPADSTLDLTRIEAT-GFRPPSMEERLDAYVAQL 479 >gi|145225314|ref|YP_001135992.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|145217800|gb|ABP47204.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] Length = 274 Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats. Identities = 87/274 (31%), Positives = 136/274 (49%), Gaps = 18/274 (6%) Query: 22 QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA 81 Q +++ + D D+ + D+++N AA T VD AE PE + ++NA GA Sbjct: 9 QGRDVVALTSRDWDITEQGSEPRLAAG---DIVVNCAAITNVDLAEAVPERSRAVNAVGA 65 Query: 82 GAIAKAADSIGIPCIYISTDY----VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS 137 G +A+A +G I++STDY VF G S P D PL++YG++KLAGE V + Sbjct: 66 GNVARACAQVGASLIHLSTDYVFSGVFGGDSTRPYDIDDEPAPLSVYGRTKLAGEHAVLA 125 Query: 138 YTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIA 196 N ++RT+W++ G++F M R A +I +V DQ G+PT + A++QIA Sbjct: 126 ALPNAYVVRTSWIFEGGNGADFAAVMRRAAAGSGDIEMVADQIGSPTYVGDLCAALLQIA 185 Query: 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 D +RG A+ G S D A+ +F AE G +V+ I ++P A Sbjct: 186 -------DGGVRGPLLHAANAGSASRFDQAQAVF---AELGADPGRVHPISGDRHPRPAP 235 Query: 257 RPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 RP+YS L +K + W+ + L + Sbjct: 236 RPSYSALAATKSTAAGLTPLRPWRAALAEALATM 269 >gi|158257270|dbj|BAF84608.1| unnamed protein product [Homo sapiens] Length = 323 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 131/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ + PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWRQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 308 >gi|282165389|ref|YP_003357774.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] gi|282157703|dbj|BAI62791.1| dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] Length = 281 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 132/291 (45%), Gaps = 23/291 (7%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDVII 55 LV G +G + + + ++ E+ G +D+ + P+ ++ Sbjct: 2 ILVTG-SGLLGSDVIRVLRKEHEVTGTFSSHPKEGAVRLDITDRGNTIRAVGELKPEYVV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AA T VD ED P+ A SIN G + AA G IY+STD+VFDG E Sbjct: 61 HTAALTNVDYCEDHPDEAASINDMGTKNVVDAARMAGARLIYVSTDFVFDGSK-GMYREE 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 P NP+++Y SKL GE +V + I RT+ VY NF+ + +++ I VV Sbjct: 120 DPVNPISVYAYSKLMGEYRVKELPGSA-IARTSVVYGNARQNFVTWVRDSLAKKQTIKVV 178 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQF +PT + A AI + + E G +H TA G +S DFA I + Sbjct: 179 TDQFNSPTLSYDCALAIAALIRHGAE-------GTYH-TAGGERISRYDFAVKI---ARF 227 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 G + + + KA RPA S LD SK+ H ++ +G++ + Sbjct: 228 YGLDPGLIEPVTSDTLKQKAKRPADSSLDVSKIGQYH--QMLDIMDGLKKM 276 >gi|113970953|ref|YP_734746.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] gi|113885637|gb|ABI39689.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] Length = 359 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 59/343 (17%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--------VEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 L+ G + Q++++L + + + + +D+ + A+ F F PD + Sbjct: 14 VLLTGADSQLSKALLRVLAKAANRFDGRVFRVHALSHAQLDIADKQSVAAAFARFKPDWV 73 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL------- 107 IN AAY AVD+AE E A+ +N+ G +A+ G ++IS+DYVF G Sbjct: 74 INCAAYNAVDRAETAAEEAYRVNSLGPELLARECALTGARLVHISSDYVFSGEPAGAAVQ 133 Query: 108 -----------------SRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAW 149 + + E + PL++YG+SKLAGE+ V +++RTAW Sbjct: 134 ALNQNGLTDSRLIESGLTERGLTESATPAPLSVYGQSKLAGEQAVLCILAERAIVIRTAW 193 Query: 150 VYSIFGSNFLLSMLRLAK---ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 +Y + G NF+ +MLRL E + ++V+ DQ G+PT +A I Q+ + + S Sbjct: 194 LYGVDGHNFVKTMLRLMATMPEGQPLTVINDQIGSPTWTDALAHLIWQLIASPLNVGCGS 253 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV--YRIFTKQYPTK--------AH 256 G+FH G SW +FA I ++ V I + Y K A Sbjct: 254 --GLFHYAGQ-GQCSWYEFALEIQRQALALKLLDKAVPISAIDSLSYAAKALEKGNKLAA 310 Query: 257 RPAYSCLDCSKLAN---------THNIRI-STWKEGVRNILVN 289 RP+YS L+ ++ TH+ + W+ ++ +L + Sbjct: 311 RPSYSALNSGRVRQCLTGQNTALTHSPELWRDWRWQLKAMLED 353 >gi|118097242|ref|XP_414497.2| PREDICTED: similar to Methionine adenosyltransferase II, beta [Gallus gallus] Length = 334 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 129/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ + G ++LL F P V Sbjct: 30 RVLITGATGLLGRAVFKEFNENNWNAVGCGYRRAQPKFEQVNLLNSVAVHDIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A IG IYISTDYVFDG S P Sbjct: 90 IVHCAAERRPDVVESQPDAASQLNVAASGNLAKEAAGIGAFLIYISTDYVFDGTS-PPYK 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 ETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYGEVERLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTNVKDVAVVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDCPVVGALRPRNAQLDCSKLEMLGIGQRTPFRAGIKESL 319 >gi|16127845|ref|NP_422409.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|221236666|ref|YP_002519103.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] gi|13425365|gb|AAK25577.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus CB15] gi|220965839|gb|ACL97195.1| dTDP-4-dehydrorhamnose reductase [Caulobacter crescentus NA1000] Length = 293 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 101/286 (35%), Positives = 147/286 (51%), Gaps = 6/286 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L G GQ+A +L + EII + R D DL P+ + L+ D+++N AA+ Sbjct: 1 MKILQFGRTGQVATALRAAAQGRSEIIALSRADCDLADPERLRATILAADCDLVVNAAAF 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD AE PE AF++NA A+A A G+P ++STD VFDG + E P Sbjct: 61 TQVDPAEAAPEAAFAVNARAPAAMAAACAERGLPFAHLSTDAVFDGRTDRAYVETDRAEP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG+SKLAGE+ V ++ V+LR +WV+S +G N++ ML+LA+ER + VV DQFG Sbjct: 121 INVYGRSKLAGEQAVLAH-PRTVVLRISWVFSRYGRNYVSFMLKLARERETLKVVADQFG 179 Query: 181 TPTSALQIARAIIQIAHNL-IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 TPT +A ++ A +D G+FH A+ G S DFA+ Sbjct: 180 TPTDGEALADFLVATAPRWAAAPADDPAFGLFHF-ANAGETSRFDFAKA---AIDRDPMT 235 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 +++ + A RP S LD +KL W+ V Sbjct: 236 KARLEPTTQAAFAEPAPRPPRSPLDTAKLRAVFGFSPEAWRPAVER 281 >gi|148222444|ref|NP_001089523.1| methionine adenosyltransferase 2 subunit beta [Xenopus laevis] gi|82249356|sp|Q4QQZ4|MAT2B_XENLA RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|67678004|gb|AAH97788.1| MGC115498 protein [Xenopus laevis] Length = 334 Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ ++ G ++LL + F P V Sbjct: 30 RALITGATGLLGRAVYKEFKENSWHVLGCGYSRARPRFECLNLLDEAAVKALIQDFKPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 II+ AA D E +PE+A +N + +AK A +G IY+S+DYVFDG S P Sbjct: 90 IIHCAAERRPDIVESQPELASLLNVVASENLAKVAAGVGAFLIYVSSDYVFDGTS-PPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E S +PLN+YGK+KL GE V +LR +Y + S + ++ Sbjct: 149 EDSIPHPLNLYGKTKLDGERAVLQNNEGAAVLRVPVMYGDVEKLSESAVTILFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A +Q+ I+ D S++GI+H + + + A Sbjct: 209 KSANLDHCQQRFPTHVKDVATVCLQLTERKIQ--DPSIKGIYHWSGNEQMTK-YEIACA- 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T + RP LDCSKL + + ++ G+R L Sbjct: 265 --MADAFNLPSSHLRPI-TDEPVGATPRPWNPQLDCSKLEKMGIGQRTPFRVGIRETL 319 >gi|83523771|ref|NP_001016828.2| methionine adenosyltransferase 2 subunit beta [Xenopus (Silurana) tropicalis] gi|82178023|sp|Q566L8|MAT2B_XENTR RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|62203140|gb|AAH93462.1| methionine adenosyltransferase II, beta [Xenopus (Silurana) tropicalis] Length = 334 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ ++ G ++LL + F P V Sbjct: 30 RALITGATGLLGRAVYKEFKENSWHVLGCGYSRARPRFEYLNLLDAAAVKALIQDFKPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 II+ AA D E +PE A +N + +AK A +G IY+S+DYVFDG S P Sbjct: 90 IIHCAAERRPDIVESQPEFASLLNVVASENLAKEAAGVGAFLIYVSSDYVFDGTS-PPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E S NPLN+YGK+KL GE V +LR +Y + S + ++ Sbjct: 149 EDSVPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYGDVEKLSESAVTILFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A +Q+ ++ D S++GI+H + + + Sbjct: 209 KSANMDHWQQRFPTYVKDVASVCLQLTERRLQ--DPSIKGIYHWSGNEQMTK-YEMTCA- 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T + RP LDCSKL + + ++ G+R L Sbjct: 265 --MADAFNLPSSHLRPI-TDEPVGATPRPWNPQLDCSKLEKIGIGQRTPFRVGIRESL 319 >gi|300743861|ref|ZP_07072881.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia dentocariosa M567] gi|300380222|gb|EFJ76785.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Rothia dentocariosa M567] Length = 478 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 21/297 (7%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G +GQ+ + L Q++ V R +DL P+ + + F S +IN AAYT Sbjct: 188 LLIVGASGQLGRELVRQLTAQNIPFEAVDRDQLDLGTPEKWRNAFRWRSYRAVINAAAYT 247 Query: 62 AVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFSP 117 AVD AE + A+ NA G +A + +P +++STDYVFDG P Sbjct: 248 AVDNAETLEGRREAWVANAHGVAVLASVCEEANLPLVHVSTDYVFDGTLPVGQEYSVEHP 307 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PL++YG SK AGE A+ + +LRT+WV G NF+ +M LA+ +VV D Sbjct: 308 IAPLSVYGASKAAGESA-ATAWRKHYLLRTSWVVGE-GKNFVATMASLAERGVNPAVVAD 365 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G PT +A A + + + G +H++ G ++WAD A ++ + G Sbjct: 366 QWGRPTFTQDLAGAALHLLFT------GAPYGTYHVSNSGEVITWADLARAVYTGT---G 416 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V T++Y A RPA S LD SKL ++ + L + Sbjct: 417 HDAARVSNTTTEEYFANAQVFAPRPANSALDLSKLIAA-GFTPRDHRDALAEYLHQL 472 >gi|115530810|emb|CAL49345.1| methionine adenosyltransferase II, beta [Xenopus (Silurana) tropicalis] Length = 334 Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ ++ G ++LL + F P V Sbjct: 30 RALITGATGLLGRAVYKEFKENNWHVLGCGYSRARPRFEYLNLLDAAAVKALIQDFKPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 II+ AA D E +PE A +N + +AK A +G IY+S+DYVFDG S P Sbjct: 90 IIHCAAERRPDIVESQPEFASLLNVVASENLAKEAAGVGAFLIYVSSDYVFDGTS-PPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E S NPLN+YGK+KL GE V +LR +Y + S + ++ Sbjct: 149 EDSIPNPLNLYGKTKLEGERAVLHNNEGAAVLRVPVLYGDVEKLSESAVTILFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A +Q+ ++ D S++GI+H + + + Sbjct: 209 KSANMDHWQQRFPTYVKDVASVCLQLTERRLQ--DPSIKGIYHWSGNEQMTK-YEMTCA- 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T + RP LDCSKL + + ++ G+R L Sbjct: 265 --MADAFNLPSSHLRPI-TDEPVGATPRPWNPQLDCSKLEKIGIGQRTPFRVGIRESL 319 >gi|319942628|ref|ZP_08016936.1| hypothetical protein HMPREF9464_02155 [Sutterella wadsworthensis 3_1_45B] gi|319803807|gb|EFW00739.1| hypothetical protein HMPREF9464_02155 [Sutterella wadsworthensis 3_1_45B] Length = 270 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 91/272 (33%), Positives = 136/272 (50%), Gaps = 15/272 (5%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 LS++ + + + R ++++ D IIN AAYTAVD AED A + Sbjct: 2 LSALRRRGILGLGFDRHELNIADQNAVIQKLRPGVFDCIINCAAYTAVDDAEDHSRDAIA 61 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 +NA + GIP ++ISTDYVFDG +R P + S T PL++YG+SK GE + Sbjct: 62 VNAAAPKYLTD----TGIPIMHISTDYVFDGRARQPYEVDSQTAPLSVYGRSKQMGEAAL 117 Query: 136 ASYTNNYVILRTAWVYSIF--GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAII 193 + I+RT+ +YS +F +ML+L ER+ + VV DQF PT A +A A++ Sbjct: 118 LTSKACGCIIRTSRLYSPTAGTRSFFQTMLQLLSERQSLGVVSDQFSAPTLAEDLADALV 177 Query: 194 QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT 253 ++ ++ + + H T + G SW FA I ER G K+ I QYP Sbjct: 178 EL---YLQGAHLRSMQVLHFT-NTGETSWLGFASAI----QERIGTTCKLEAIPAVQYPA 229 Query: 254 KAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 KA RP YS L L I+ +W++ + Sbjct: 230 KARRPHYSVLSLQSL-QAWRIKPRSWQDALTE 260 >gi|255327299|ref|ZP_05368373.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296] gi|255295579|gb|EET74922.1| dTDP-4-dehydrorhamnose reductase [Rothia mucilaginosa ATCC 25296] Length = 471 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 100/297 (33%), Positives = 149/297 (50%), Gaps = 23/297 (7%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+IG GQ+ L Q+V + V R +DL KP+ + F S +IN AAYT Sbjct: 188 ILIIGAGGQLGTELVRQLTEQNVPFLAVDRDRLDLGKPEQWRDAFRWRSFRAVINAAAYT 247 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFS 116 AVD+AE PE A++ NA G A+A + +P +++STDYVFDG E Sbjct: 248 AVDQAET-PEGRREAWAANALGVSALASICEEANLPLVHVSTDYVFDGSLPLGEEYPEDH 306 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG SK AGE A++ +Y LRT+WV G NF+ +M LA+ + SVV Sbjct: 307 PLAPLSVYGASKAAGEVAAAAWRKHYT-LRTSWVVGA-GKNFVGTMASLAERGIDPSVVA 364 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT +A A + + + E G ++++ G ++WA FA ++ + Sbjct: 365 DQWGRPTFTQDLAAAALHLLFSGAE------YGTYNVSNTGEVINWAQFARAVYEGT--- 415 Query: 237 GGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++V T++Y AHRP S +D SKL T + + + L Sbjct: 416 GHDPARVSDTTTEEYFANAELFAHRPTNSAMDLSKLIAT-GFTPRDHRVALESYLKQ 471 >gi|313676859|ref|YP_004054855.1| dtdp-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126] gi|312943557|gb|ADR22747.1| dTDP-4-dehydrorhamnose reductase [Marivirga tractuosa DSM 4126] Length = 298 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 32/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGR-------------PDIDLLKPKDFASF 45 MK L+ G+NG + Q L + E+I R +D+ ++ S Sbjct: 1 MKILITGSNGLLGQKLVKLIIANGGHELIATARGKNRLPKESGYIFESLDITSEQEVRSV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 ++ PDVIIN AA T VD+ E E E + +N + KA+++ + +STD++FD Sbjct: 61 IMNHRPDVIINTAAMTNVDQCETEQEDCWKLNVTAVKHLLKASEACNAFFLQLSTDFIFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLS 161 G P E + NP++ YG+SKLA E+ + ++ I RT VY I +L Sbjct: 121 G-EDGPYTEEAIANPVSYYGESKLAAEQLILESKIDWAIARTVLVYGIAHDMSRSNIILW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + +E ++I VV DQ+ TPT A +A+ + IA + GI++++ D ++ Sbjct: 180 VKKSLEEGKDIQVVDDQWRTPTLAEDLAKGCLLIAEKKAK-------GIYNISGDD-LLT 231 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + A + P + + + + ++ A RP + K + +++E Sbjct: 232 PYEMA---VKTAEFFNLPQTSMTKSDSTKFKQTAKRPPKTGFILDKAKRDLGFKPHSFEE 288 Query: 282 GVRNILVN 289 G++ +L Sbjct: 289 GIQ-VLAE 295 >gi|193216392|ref|YP_001997591.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] gi|193089869|gb|ACF15144.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] Length = 307 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 30/301 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFF 46 + L+ G NG + Q L+ D +++ R +D+L + Sbjct: 7 RVLITGANGLLGQKLTDCFAADRAYDLLATARQPTPYNQTASFGFISLDMLDRQAVKELV 66 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +F P+ I+N AYT VD E E ++ + N +A AA + +++STDY+FDG Sbjct: 67 WNFEPNFIVNAGAYTNVDGCEKEKDLCWKGNVIAVENLAAAARLVKAQVVHVSTDYIFDG 126 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P DE NPL+ YG+SKLA E + + ++ I+RT VY + L LA Sbjct: 127 -KNGPYDEAQQPNPLSYYGRSKLASENVLRNSGEHWAIIRTMVVYGVAAQCKKNFALWLA 185 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 K +++ +V DQFG T A +AR I + + + G+++M G VS Sbjct: 186 GELKAGKQVRIVDDQFGNTTLADDLARGIYMLV-------NKAKHGVYNMVG-GDNVSRY 237 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +FA + G + + I T A RP S L K IR + E + Sbjct: 238 EFA---LRLAEVFGFDKNLITPIKTADLSQLAERPMKSGLITLKAETELGIRFFSLNESL 294 Query: 284 R 284 R Sbjct: 295 R 295 >gi|40714032|dbj|BAD06938.1| methionine adenosyltransferase II beta subunit [Mus musculus] Length = 334 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 30 RVLITGATGLLGRAVYKEFQQSNWHTVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYV DG P Sbjct: 90 IVHCAAEGRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVLDGT-NPPYT 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E +PLN+YGK+KL GE+ +LR +Y + S + ++ Sbjct: 149 EEDIPSPLNLYGKTKLDGEKAALENNLGAAVLRIPVLYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVASVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVIGAQRPKNAQLDCSKLETLGIGQRTPFRTGIKESL 319 >gi|329665893|pdb|2YDY|A Chain A, Crystal Structure Of Human S-Adenosylmethionine Synthetase 2, Beta Subunit In Orthorhombic Crystal Form Length = 315 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 129/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 4 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 63 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 64 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 122 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 123 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVXFDKVQFSN 182 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + + Q PT +A Q+A D S++G FH + + + A I Sbjct: 183 KSANXDHWQQRFPTHVKDVATVCRQLAEK--RXLDPSIKGTFHWSGNEQXTK-YEXACAI 239 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 240 ---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESL 293 >gi|260174647|ref|ZP_05761059.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|315922911|ref|ZP_07919151.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] gi|313696786|gb|EFS33621.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D2] Length = 303 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 39/312 (12%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVG-RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + ++ PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSACKQYKVTGCSLHPDILPNNAEDYRFIETDIRNEADVKHL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N G +A + I++STD+VFD Sbjct: 63 FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVFD 122 Query: 106 GLSRTP----IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G E P+N YG +K GEE+VA ++Y I+R VY + Sbjct: 123 GKINEAAGLLYTEEDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQHGN 182 Query: 162 MLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +++L K +EI VV DQ+ TPT ++ + ++ + + GIFH+ D Sbjct: 183 IVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIEH-------TTNGIFHICGDE 235 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 AE + + S ++ T++ RP +S + K R Sbjct: 236 CIT----IAEIAYQVADCMKLDRSLIHPATTEEMNESTPRPRFSGMSIDKARTMLGYRP- 290 Query: 278 TWKEGVRNILVN 289 + ++ IL N Sbjct: 291 ---QKLKEILAN 299 >gi|293369744|ref|ZP_06616320.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] gi|292635166|gb|EFF53682.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CMC 3f] Length = 303 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 39/312 (12%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVG-RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + ++ PDI D+ D + Sbjct: 3 KILIIGANGFTGRQIVNDLSACKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVSHL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N G +A + I++STD+VFD Sbjct: 63 FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVFD 122 Query: 106 G----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G + E P+N YG +K GEE+VA ++Y I+R VY + Sbjct: 123 GKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQHGN 182 Query: 162 MLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +++L K +EI VV DQ+ TPT ++ ++++ + GIFH+ D Sbjct: 183 IVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLIEHTA-------NGIFHICGDE 235 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 AE + + S ++ T++ RP +S + K R Sbjct: 236 CMT----IAEIAYQVADYMKLDRSLIHPTTTEEMNESTPRPRFSGMSIDKARTMLGYRP- 290 Query: 278 TWKEGVRNILVN 289 + ++ IL N Sbjct: 291 ---QKLKEILAN 299 >gi|283458590|ref|YP_003363223.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18] gi|283134638|dbj|BAI65403.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Rothia mucilaginosa DY-18] Length = 474 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 100/298 (33%), Positives = 150/298 (50%), Gaps = 23/298 (7%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+IG GQ+ L Q+V + V R +DL KP+ + F S +IN AAYT Sbjct: 188 ILIIGAGGQLGTELVRQLTEQNVPFLAVDRDRLDLGKPEQWRDAFRWRSFRAVINAAAYT 247 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFS 116 AVD+AE PE A++ NA G A+A + +P +++STDYVFDG E Sbjct: 248 AVDQAET-PEGRCDAWAANALGVSALASICEEANLPLVHVSTDYVFDGSLPLGEEYPEDY 306 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL++YG SK AGE A++ +Y LRT+WV G NF+ +M LA+ + SVV Sbjct: 307 PLAPLSVYGASKAAGEVAAAAWRKHYT-LRTSWVVGA-GKNFVGTMASLAERGIDPSVVA 364 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ+G PT +A A + + ++ E G ++++ G ++WA FA ++ + Sbjct: 365 DQWGRPTFTQDLAAAALHLLFSVAE------YGTYNVSNTGEVINWAQFARAVYEGT--- 415 Query: 237 GGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G ++V T++Y AHRP S +D SKL +E + L + Sbjct: 416 GHDPARVSDTTTEEYFANAELFAHRPTNSAMDLSKLIAA-GFTPRDHREALAAYLAEM 472 >gi|23464835|ref|NP_695438.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] gi|23325419|gb|AAN24074.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum NCC2705] Length = 480 Score = 232 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 32/304 (10%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ +++ + ++ E D P + F S +IN Sbjct: 189 RTMVTGCNGQLGRAIRAYVDAHGLEGFEFH--DIDTFDFSDPAQYDRFDWSL-YGTVINA 245 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AYTAVDKAE PE +A+ NA+G +AK A I +++S+DYVFDG + DE Sbjct: 246 GAYTAVDKAET-PEGRVLAWKANAQGPALLAKVAREHNITLVHVSSDYVFDGTAEL-HDE 303 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK-ERR 170 PL +YG+SK AG+ V + + ILR++WV F + R+AK E Sbjct: 304 EEAFAPLGVYGQSKAAGDIAV-ANCPRHYILRSSWVIGEGHNFVKTMMGLSDRVAKGELP 362 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E++VV DQ+G T +A AI + + G + +T G SWAD A +F Sbjct: 363 EVTVVDDQYGRLTFTKDMAEAIFHL------FDGGAAYGTYDLTGSGTVKSWADIARTVF 416 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + GG KV I T +Y A RP YS LD +K+ T + + W+E ++ Sbjct: 417 DLTNGNGG---KVKPISTAEYFANAKAPVSPRPTYSALDLAKIEAT-GLDVPDWEESLKA 472 Query: 286 ILVN 289 + Sbjct: 473 YVTK 476 >gi|38232977|ref|NP_938744.1| putative bifunctional protein [Corynebacterium diphtheriae NCTC 13129] gi|38199235|emb|CAE48866.1| Putative bifunctional protein [Corynebacterium diphtheriae] Length = 448 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 83/291 (28%), Positives = 146/291 (50%), Gaps = 26/291 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +GQ+ ++L+ + D E+ D D++ P + + + IIN AAY Sbjct: 176 RILITGAHGQLGRALAELL-PDAEL--CSHVDFDVVHPPQ--RSWRQY--EAIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AED+ A+ +NA +A+ A + +++STD++FDG + +E +PL Sbjct: 229 NVDAAEDDRARAWEVNAVAPARLAQIATENNLTLVHVSTDFIFDGTTSV-HEETEAPSPL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG SK AG+ A+ T + ++RT+WV+ G+ F+ +M LA+ +V+ DQ G Sbjct: 288 SVYGASKAAGDIA-AAVTPKHYVVRTSWVFGQGGN-FVETMRSLAQRGIRPNVISDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A I+ + + ++ G+++++ G V D A +F G Sbjct: 346 PTHAADLAAGIVHLLRS------SADYGVYNLSNSGDVVGRDDLARAVFEHCGVSG---E 396 Query: 242 KVYRIFTKQY-----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + T +Y P A RPA S + K+ T + W++ VR+ L Sbjct: 397 AVTSVTTAEYEVHRGPL-AKRPAESTFNLDKIVAT-GFQPRPWRDAVRDYL 445 >gi|319779307|ref|YP_004130220.1| dTDP-4-dehydrorhamnose reductase [Taylorella equigenitalis MCE9] gi|317109331|gb|ADU92077.1| dTDP-4-dehydrorhamnose reductase [Taylorella equigenitalis MCE9] Length = 309 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 24/294 (8%) Query: 2 KCLVIGNNGQIAQSLS-----SMCVQDVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVII 55 + ++IGN GQ+ SL + ID + S+ ++ PD++I Sbjct: 12 RAVIIGNTGQLGLSLKFSKSLYSICRYFNFFITSH--IDPHENFRAVKSYLTAYKPDLVI 69 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AYT+VD AE++ I++ IN+ +A+ ++ STDYVFDG S P E Sbjct: 70 NTIAYTSVDAAEEDKLISYHINSVFPKILAEWCLKNDATLVHFSTDYVFDGRSNKPYKEE 129 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR-----LAKERR 170 NP+N YG KL E + TNN+ I RT+ +YS F NFL + AK Sbjct: 130 DSPNPINQYGYDKLTAELYIEQMTNNFYIFRTSALYSPFRVNFLKKIFHKLSHPKAKGGY 189 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +VV DQ PTS + + +I T GI+H+ SW +FA I Sbjct: 190 SFNVVNDQITIPTSCDFLLEHMYKII-------STKANGIYHVVPSN-YCSWYEFARLIR 241 Query: 231 WESAERGGPYSK---VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 E+ +G S + + + ++ + A RP +S LD SK+A I I +W E Sbjct: 242 SEAIRKGFLSSSAPMISPVKSTRFKSAAKRPLFSVLDNSKMAKALGIEIPSWDE 295 >gi|326928318|ref|XP_003210327.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Meleagris gallopavo] Length = 342 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 129/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ + G ++LL F P V Sbjct: 38 RVLITGATGLLGRAVFKEFNENNWNAVGCGYRRAQPKFEQVNLLNSVAVHDIIHDFQPHV 97 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A IG IYISTDYVFDG S P Sbjct: 98 IVHCAAERRPDVVESQPDAASQLNVAASGNLAKEAAGIGAFLIYISTDYVFDGTS-PPYK 156 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 157 ETDVPNPLNLYGKTKLEGEKAVLENNEGAAVLRIPVLYGEVERLEESAVTVMFDKVQFSN 216 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D S++G FH + + + A I Sbjct: 217 KSANMDHWQQRFPTNVKDVAVVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 273 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G++ L Sbjct: 274 ---ADAFNLPSSHLRPI-TDCPVVGALRPRNAQLDCSKLEMLGIGQRTPFRAGIKESL 327 >gi|269957343|ref|YP_003327132.1| dTDP-4-dehydrorhamnose reductase [Xylanimonas cellulosilytica DSM 15894] gi|269306024|gb|ACZ31574.1| dTDP-4-dehydrorhamnose reductase [Xylanimonas cellulosilytica DSM 15894] Length = 281 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 95/282 (33%), Positives = 147/282 (52%), Gaps = 14/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ L+ G G +A L + E++ + D+D+ + F DV+ N AA Sbjct: 1 MRWLITGGGGMLATDLEKTLAERGHEVVTATQHDLDITDADACVAAVAGF--DVVANAAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AED +AF++NA GA +A+AA + G +++STDYVFDG + P +P Sbjct: 59 WTDVDGAEDHEPVAFAVNAVGAANLARAATAAGARLLHVSTDYVFDGDATEPYPAHAPVA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++K AGE V + +++I+RTAW+Y F ++ R+ +E+ SVV DQ Sbjct: 119 PRSAYGRTKAAGEWAVLA-EGDHLIVRTAWLYGATTGKFPRTIARVLREKGAASVVDDQV 177 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT +A ++++A + RGI+H T+ GG SW + A+ + +A G Sbjct: 178 GQPTWTADLADLMVRLADA------GAPRGIYHGTS-GGRCSWFELAQEV---AATIGLD 227 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 S V + + KAHRPAYS L L I W+E Sbjct: 228 PSVVTPTSSASFAAKAHRPAYSVLSHDSLEAIGVAPIGDWRE 269 >gi|237718115|ref|ZP_04548596.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4] gi|229452536|gb|EEO58327.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_2_4] Length = 303 Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 39/312 (12%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVG-RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + ++ PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSACKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVRHL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N G +A + I++STD+VFD Sbjct: 63 FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVFD 122 Query: 106 G----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G + E P+N YG +K GEE+VA ++Y I+R VY + Sbjct: 123 GKINETAGLLYTEKDLPAPVNYYGYTKWKGEERVAETCSSYAIVRVEIVYGKALPGQHGN 182 Query: 162 MLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +++L K +EI VV DQ+ TPT ++ ++++ + GIFH D Sbjct: 183 IVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLIEHTA-------NGIFHTCGDE 235 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 AE + + S ++ T++ RP +S + K R Sbjct: 236 CMT----IAEIAYQVADYMKLDRSLIHPATTEEMNESTPRPRFSGMSIDKARTMLGYRP- 290 Query: 278 TWKEGVRNILVN 289 + ++ IL N Sbjct: 291 ---QKLKEILAN 299 >gi|291523077|emb|CBK81370.1| dTDP-4-dehydrorhamnose reductase [Coprococcus catus GD/7] Length = 282 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 143/289 (49%), Gaps = 13/289 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +IG G++ ++S + + D+D+ +F P V+IN A Y Sbjct: 5 KVWIIGAKGRLGSTISDALDRMAYNVLTSDMDVDITDMDSVTAFMDMSHPAVVINCAGYN 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + E++ AF +NA GA +A A+ +G I++STD VFDG P++EF P Sbjct: 65 THNWLEEDMVKAFRVNAIGARNVASASRKVGAKLIHMSTDDVFDGQGNEPLNEFDTATPD 124 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 I+GKSKLAGE V ++I+R++WVY+ GS F+ S++R AKE I V +Q+ + Sbjct: 125 TIFGKSKLAGENFVRELNPKHLIVRSSWVYAKEGSCFVNSVIRQAKEGGVIQVAAEQYSS 184 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PTSA +A ++++ D + GI+H + + G S + AE I + P Sbjct: 185 PTSAKVLADFVMKMI-------DANEYGIYHASCE-GCCSRVEAAEEILRCMGQ--DPTG 234 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++ I + + P + L + T ++ WK+ +R+ + + Sbjct: 235 RIEEISAEA---GKNSPRRTDLQNLMMKVTGIYQMPDWKDAMRDYIQEL 280 >gi|119903023|ref|XP_585042.3| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Bos taurus] gi|297480021|ref|XP_002691166.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Bos taurus] gi|296482879|gb|DAA24994.1| methionine adenosyltransferase 2 subunit beta-like [Bos taurus] Length = 334 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLITGATGLFGRAVYKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIYDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E+ P+ A +N + +G +AK A +IG IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENHPDTASQLNVDASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ +LR +Y + S + ++ Sbjct: 149 EEDIPNPLNLYGKTKLEGEKADLENNLGAAVLRIPVLYGEVERLEESAVTIMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T AHRP + LDCS+L + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVVGAHRPRNAQLDCSRLETLGIGQRTPFRIGIKESL 319 >gi|117645018|emb|CAL37975.1| hypothetical protein [synthetic construct] gi|261859642|dbj|BAI46343.1| methionine adenosyltransferase II, beta [synthetic construct] Length = 334 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 265 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A P + LDCSKL + + ++ G++ L Sbjct: 266 ---ADAFNLPSSHLRPI-TDSPVLGAQCPRNAQLDCSKLETLGIGQRTPFRIGIKESL 319 >gi|270284084|ref|ZP_05965516.2| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium gallicum DSM 20093] gi|270278058|gb|EFA23912.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium gallicum DSM 20093] Length = 503 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 34/306 (11%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +S+ +Q E + D PK + + S IIN Sbjct: 210 RTLVTGCNGQLGRSIRQYVENHGLQGFEF--TDIDEFDFSDPKSYEQYDWSL-YGTIINA 266 Query: 58 AAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A+TAVDKAE E ++A+ NA+G +AK A I ++IS+DYVFDG + E Sbjct: 267 GAFTAVDKAETEEGRKLAWKANAQGPALLAKVAADHHIVLVHISSDYVFDGTQQL-HTED 325 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-------E 168 +PL +YG++K AG+ V S + ILR++WV + F+ +M+ L+K + Sbjct: 326 EAFSPLGVYGQTKAAGDIAV-SNVPEHYILRSSWVIGNGHN-FVKTMMNLSKRVANPTDQ 383 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +++VV DQFG T ++A AI + + + G ++MT G SWA A+ Sbjct: 384 LEQVTVVNDQFGRLTFTDEMAAAIFFLLGSSVA------YGTYNMTGSGDVTSWAQIAKE 437 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKA-----HRPAYSCLDCSKLANTHNIRISTWKEGV 283 +F ++ G V I T++Y A RP S LD KL I W+E + Sbjct: 438 VFNLTSGNG---EAVKPITTQEYFLNANAPVSPRPTNSALDLGKLEEAGFIPA-DWEESL 493 Query: 284 RNILVN 289 + + Sbjct: 494 EEYVAH 499 >gi|325067630|ref|ZP_08126303.1| dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase [Actinomyces oris K20] Length = 309 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 90/282 (31%), Positives = 146/282 (51%), Gaps = 22/282 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ ++L ++ Q + I V P++D+ +S + D+IIN AA+ Sbjct: 27 RVLVTGANGQLGRALMALLPQAGFDPIGVDLPEVDISDAAAMSS-WDWTGYDIIINAAAW 85 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG++ E Sbjct: 86 TNVDGAET-PEGRRLSWRANTVGPVNLARAAVQHGLTLVHLSTEYTFDGVTAV-HTEEET 143 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK AG+ V S + ++RT+WV G NF+ +ML LA+ VV D Sbjct: 144 PSPLGVYGQSKAAGDAAV-SVCPRHYLVRTSWVVGD-GKNFVKTMLSLAERGISPQVVAD 201 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T A +A II + + E G ++++ DG +SWAD A+ ++ + G Sbjct: 202 QTGRLTFASDLAAGIIHLITSGAE------FGTYNLSGDGPILSWADIAKRVYESA---G 252 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIR 275 +V + T++Y A RP S LD +++ T Sbjct: 253 HSPDEVTPVTTEEYYAGQEGIAPRPLSSALDLARIKATGFTP 294 >gi|160884444|ref|ZP_02065447.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483] gi|299146002|ref|ZP_07039070.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] gi|156110183|gb|EDO11928.1| hypothetical protein BACOVA_02428 [Bacteroides ovatus ATCC 8483] gi|298516493|gb|EFI40374.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_1_23] Length = 303 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 77/312 (24%), Positives = 125/312 (40%), Gaps = 39/312 (12%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVG-RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + ++ PDI D+ D Sbjct: 3 KILIIGANGFTGRQIVNDLSACKQYKLTGCSLHPDILPNNAEDYRFIETDIRNEADVRHL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N G +A + I++STD+VFD Sbjct: 63 FKEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVGQLADLCEEYKSRFIHLSTDFVFD 122 Query: 106 GLSRTP----IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G E P+N YG +K GEE+V ++Y I+R VY + Sbjct: 123 GKINEAAGLLYTEKDLPAPINYYGYTKWKGEERVTETCSSYAIVRVEIVYGKALPGQHGN 182 Query: 162 MLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +++L K +EI VV DQ+ TPT ++ ++++ + GIFH+ D Sbjct: 183 IVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVLRLIEHTA-------NGIFHICGDE 235 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 AE + + S ++ T++ RP +S + K R Sbjct: 236 CMT----IAEIAYQVADYMKLDRSLIHPATTEKMNESTPRPRFSGMSIDKARTMLGYRP- 290 Query: 278 TWKEGVRNILVN 289 + ++ ILVN Sbjct: 291 ---QKLKEILVN 299 >gi|139439925|ref|ZP_01773277.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC 25986] gi|133774775|gb|EBA38595.1| Hypothetical protein COLAER_02315 [Collinsella aerofaciens ATCC 25986] Length = 484 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 35/308 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV---EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ ++ ++ + + D+ P +A + S +IN Sbjct: 193 RTLVTGCNGQLGHAVRALAEERGVAKDFDFCDIDTFDMSDPDAYAQYDWSL-YGTVINCG 251 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE PE A+ NA G +A+ GI +++S+DYVFDG + E Sbjct: 252 AYTAVDKAEA-PEGRVTAWKANATGPALLARTCAGHGITLVHVSSDYVFDGTAEV-HTED 309 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER------ 169 P +PL++YG++K AG+ VA + I+R++WV + + ++ +R Sbjct: 310 EPLSPLSVYGQTKAAGDIAVAG-CPRHYIMRSSWVIGEGHN--FVKTMKALSDRVADPED 366 Query: 170 --REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +++VV DQ G T +ARAI + + G + T G SWAD A Sbjct: 367 GLTQVTVVDDQLGRLTFTRDMARAIFHVLGTH------APYGTYDCTGSGAVKSWADIAR 420 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEG 282 +F + G KV + T Y A RP +S LD S+L + + W+E Sbjct: 421 AVFEAANGNG---DKVVPVSTADYYGGAEGPVAPRPVHSALDLSRLESV-GFHMPDWEEE 476 Query: 283 VRNILVNI 290 + L + Sbjct: 477 LGEYLKTL 484 >gi|295084034|emb|CBK65557.1| dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens XB1A] Length = 310 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 124/315 (39%), Gaps = 42/315 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + G PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHAQYKVTGCSLHPDISPNDVGKYRFIETDIRNEADIKCL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N +A + I++STD+VFD Sbjct: 63 FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVFD 122 Query: 106 GL----------SRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 G P E P+N YG +K GEEKVA ++Y I+R A VY Sbjct: 123 GKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVAIVYGRA 182 Query: 155 GSNFLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++++L K +EI VV DQ+ TPT ++ + ++ + GI Sbjct: 183 LPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH-------PTNGI 235 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 FH+ V AE + + G +S ++ + T++ RP +S + K Sbjct: 236 FHICG----VECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTPRPRFSGMSIDKART 291 Query: 271 THNIRISTWKEGVRN 285 KE + N Sbjct: 292 MLGYEPQKLKEALAN 306 >gi|293189321|ref|ZP_06608044.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces odontolyticus F0309] gi|292821784|gb|EFF80720.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces odontolyticus F0309] Length = 475 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 89/281 (31%), Positives = 136/281 (48%), Gaps = 21/281 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L + + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMRALPEAGFTVTGVDLPEVSISDAERVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE + N+ G +A+ A + G ++IST+YVFDG I E Sbjct: 252 TNVDGAET-PEGRRATWQANSTGPAILAREATAHGATMVHISTEYVFDGTQDVHI-EDEA 309 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL YG+SK G+ VAS T + I+RT+WV G NFL +M+ LA + SVV D Sbjct: 310 PSPLGAYGQSKAGGDAAVAS-TPKHYIVRTSWVVGD-GKNFLKTMVSLADQGTSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A+ II + + + G ++++ +G +SWA A+ +F G Sbjct: 368 QVGRLTFTSDLAKGIIHLLTS------DAPFGTYNLSGEGPVMSWAQIAKRVFELC---G 418 Query: 238 GPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIR 275 V + T++Y A RP S LD +K+ Sbjct: 419 RNPEDVTEVTTEEYFAGREVAPRPLSSVLDLTKIKAAGFTP 459 >gi|294646105|ref|ZP_06723768.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294808300|ref|ZP_06767058.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] gi|292638549|gb|EFF56904.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides ovatus SD CC 2a] gi|294444519|gb|EFG13228.1| putative dTDP-4-dehydrorhamnose reductase [Bacteroides xylanisolvens SD CC 1b] Length = 310 Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 128/319 (40%), Gaps = 46/319 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + G PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHTQYKVTGCSLHPDILPNDAGKYRFIETDIRNEADIKRL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N +A + I++STD+VFD Sbjct: 63 FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVFD 122 Query: 106 G-----------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 G + E P+N YG +K GEEKVA +++ I+R A VY Sbjct: 123 GKMFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSSFAIIRVAIVYGRA 182 Query: 155 GSNFLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++++L K +EI VV DQ+ TPT ++ + ++ + GI Sbjct: 183 LPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH-------PTNGI 235 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 FH+ D +S A+ A + + G S ++ + T++ RP +S + K Sbjct: 236 FHICGDE-CMSIAEIA---YQVADYMGLDRSLIHPVTTEEMNETTPRPRFSGMSIDKART 291 Query: 271 THNIRISTWKEGVRNILVN 289 + ++ +L N Sbjct: 292 MLGYEP----QKLKEVLAN 306 >gi|296130189|ref|YP_003637439.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas flavigena DSM 20109] gi|296022004|gb|ADG75240.1| dTDP-4-dehydrorhamnose reductase [Cellulomonas flavigena DSM 20109] Length = 287 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 13/282 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ +V+G+ G + + + E+ R +D+L P A DV++N AA Sbjct: 1 MRWVVMGSAGMLGTDVVATLRDAGHEVEAHDRATVDILDPDAVARVVEGA--DVVVNCAA 58 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +TAVD AE++ E AF++NA G +A+ A G + +STDYVF G + +P E Sbjct: 59 WTAVDAAEEQEEAAFAVNATGPQVLARRAREAGARIVQVSTDYVFPGDATSPYGETDLAA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + YG++KLAGE V + +++++RTAW+Y G F ++ +R ++VV DQ Sbjct: 119 PRSAYGRTKLAGEWAVRAEAPDHIVVRTAWLYGAGGRCFPRTIAHAMAQRGALTVVADQV 178 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A ++++ + G +H TA G SW FA+ + G Sbjct: 179 GQPTWARDVADLVLRLVDA------GAPAGTYHGTA-SGQTSWHGFAQEAVAAA---GLD 228 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V I + +Y A RPAYS L L I W+E Sbjct: 229 RDAVTPISSAEYQAAAPRPAYSVLGHDALVRVGVAPIGDWRE 270 >gi|154507643|ref|ZP_02043285.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC 17982] gi|153797277|gb|EDN79697.1| hypothetical protein ACTODO_00124 [Actinomyces odontolyticus ATCC 17982] Length = 475 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 21/281 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L + + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMRALPEAGFTVTGVDLPEVSISNAEQVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE + N+ G +A+ A + G ++IST+YVFDG + E Sbjct: 252 TNVDGAET-PEGRRATWQANSTGPAILAREATAHGATMVHISTEYVFDGTQDVHV-EDEA 309 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL YG+SK G+ VAS T + I+RT+WV G NFL +M+ LA + SVV D Sbjct: 310 PSPLGAYGQSKAGGDAAVAS-TPKHYIVRTSWVVGD-GKNFLKTMVSLADQGTSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A+ II + + + G ++++ +G +SWA A+ +F G Sbjct: 368 QVGRLTFTSDLAKGIIHLLTS------DAPFGTYNLSGEGPVMSWAQIAKRVFELC---G 418 Query: 238 GPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIR 275 V + T++Y A RP S LD +K+ Sbjct: 419 RNPEDVTEVTTEEYFAGREVAPRPLSSVLDLTKIKAAGFTP 459 >gi|298385499|ref|ZP_06995057.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] gi|298261640|gb|EFI04506.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_14] Length = 302 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 80/314 (25%), Positives = 124/314 (39%), Gaps = 40/314 (12%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFA 43 MK ++IG NG + + + + G PDI D+ Sbjct: 1 MKNIMIIGANGFTGRQILNDLSSKAQYKVTGCSLHPDILPRNGGNYHFITTDIRDEAAVK 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F PDV+IN +A + D E E A+ N +A +S I++STD+V Sbjct: 61 QLFKEVQPDVVINCSALSVPDYCETHHEEAWLTNVTAVEQLAHLCESYKSRFIHLSTDFV 120 Query: 104 FDG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 FDG S E S P+N YG +K GEEKVA +NY I R VY Sbjct: 121 FDGKIDEKSGQLYTEESLPAPVNYYGFTKWKGEEKVAEICSNYAIARVEIVYGKALPGQH 180 Query: 160 LSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 ++++L +EI VV DQ+ TPT ++ + + N + GIFH+ Sbjct: 181 GNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDVSAGVQHLVEN-------AANGIFHICG 233 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + AE F + S V+ T++ RP +S + +K + Sbjct: 234 EECLT----IAEIAFQVADYMKLDCSLVHPATTEEIQEATPRPRFSGMSIAKARTILGYQ 289 Query: 276 ISTWKEGVRNILVN 289 +++IL+ Sbjct: 290 PRK----LKDILME 299 >gi|269794232|ref|YP_003313687.1| dTDP-4-dehydrorhamnose reductase [Sanguibacter keddieii DSM 10542] gi|269096417|gb|ACZ20853.1| dTDP-4-dehydrorhamnose reductase [Sanguibacter keddieii DSM 10542] Length = 297 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 13/281 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + V+G G + Q + + +D ++ + R ++D+ + + DV++N A+ Sbjct: 16 RWAVVGAAGMLGQDVVARLERDGRDVTALTRAELDVTDAAACLAALAGY--DVVVNCTAW 73 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + AF++NA GA +A+AA + G + +STDYVF G + TP + + P Sbjct: 74 TAVDDAETQEGAAFAVNAVGAANLAQAAAARGARLVQVSTDYVFAGSATTPYEADAVVAP 133 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 ++ YG++K AGE V + + + ++RTAW+Y G +F ++ R+A ER +SVV DQ G Sbjct: 134 VSAYGRTKAAGEWAVRAASPQHHVVRTAWLYGAGGGSFPRTIARVAGERGAVSVVDDQRG 193 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +A ++++ + G FH T+ G +W DFA + G Sbjct: 194 QPTWTGDVADLVVRLVDADVPG------GTFHATS-SGEATWFDFAREAVATA---GLDR 243 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + + A RP+YS L + L I W++ Sbjct: 244 DVVTPTTSADFVRPAPRPSYSVLGHASLVAAGVTPIGDWRD 284 >gi|94986107|ref|YP_605471.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM 11300] gi|94556388|gb|ABF46302.1| dTDP-4-dehydrorhamnose reductase [Deinococcus geothermalis DSM 11300] Length = 723 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 19/285 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + ++ + C Q + + R ++++ P+ A+ ++ P ++N A Y Sbjct: 440 LLITGATGTLGRAFARACEQRGLPYHLLSRRELEIADPRSAAAALATYRPWAVVNAAGYV 499 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE +P N G +A A G+ + S+D VFDG P E PL Sbjct: 500 RVDDAERDPRN-ERENTLGPQVLAHACAEQGVRLLTFSSDLVFDGRKGKPYVESDTPKPL 558 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N YG+SK A EE V + +I+RT+ + + NF + R + + + V DQ Sbjct: 559 NAYGRSKRAAEESVLTALPEALIVRTSAFFGPWDPYNFATWVWRELRAGQPVRVADDQVV 618 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A + + + S G++H+ A+ G VSWA FA+ + + G Sbjct: 619 SPTYVPDLTHAALDLLID-------SESGLWHL-ANAGAVSWAAFAQLV---AGVTGLDA 667 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + V + + A RP YS L + + +E +R Sbjct: 668 ALVEPVPSAALNLSAARPPYSALTSER-----GWLMPELEEALRR 707 >gi|298481164|ref|ZP_06999358.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] gi|298272738|gb|EFI14305.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D22] Length = 310 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 79/319 (24%), Positives = 127/319 (39%), Gaps = 46/319 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFASF 45 K L+IG NG + + + + G PDI D+ D Sbjct: 3 KILIIGANGFTGRQILNDLSVHAQYKVTGCSLHPDISPNDVGKYRFIETDIRNEADIKCL 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDV+IN +A + D E E A+ N +A + I++STD+VFD Sbjct: 63 FEEVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVFD 122 Query: 106 GL----------SRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 G P E P+N YG +K GEEKVA ++Y I+R A VY Sbjct: 123 GKMFVFDEKINEDAGPLYTEEDIPAPVNYYGYTKWKGEEKVAETCSSYAIVRVAIVYGRA 182 Query: 155 GSNFLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 ++++L K +EI VV DQ+ TPT ++ + ++ + GI Sbjct: 183 LPGQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH-------PTNGI 235 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 FH+ V AE + + G +S ++ + T++ RP +S + K Sbjct: 236 FHICG----VECMSIAEIAYQVADYMGLDHSLIHPVTTEEMNETTPRPRFSGMSIDKART 291 Query: 271 THNIRISTWKEGVRNILVN 289 + + ++ +L N Sbjct: 292 MLGYKP----QKLKEVLAN 306 >gi|224068185|ref|XP_002189542.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 333 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ ++ + G ++LL F P V Sbjct: 29 RVLITGATGLLGRAVFKEFNENNWNTVGCGYRRAQPRFEHVNLLDCIAVHDIIHDFQPHV 88 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N + +AK A +G IYISTDYVFDG S P Sbjct: 89 IVHCAAERRPDVVEGQPDAASQLNVAASANLAKEAAGVGAFLIYISTDYVFDGTS-PPYK 147 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 148 ETDVPNPLNLYGKTKLEGEKAVLENNEETAVLRIPVLYGEVERLEESAVTVMFDKVQFSN 207 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT+ +A Q+A + D S++G FH + + + A I Sbjct: 208 KSANMDHWQQRFPTNVKDVAAVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCSKL + + ++ G+R L Sbjct: 265 ---ADAFNLPSSHLRPI-TDSPVVGALRPKNAQLDCSKLEMLGIGQRTPFRAGIRESL 318 >gi|154488287|ref|ZP_02029404.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis L2-32] gi|154083438|gb|EDN82483.1| hypothetical protein BIFADO_01861 [Bifidobacterium adolescentis L2-32] Length = 483 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 32/304 (10%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ ++ E D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVESHGLEGFEFN--DIDTFDFSDPAQYDQFDWSL-YGTIINA 248 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AYTAVDKAE PE +A+ NA+G +A+ A I +++S+DYVFDG R DE Sbjct: 249 GAYTAVDKAET-PEGRALAWKANAQGPALLARVAREHNITLVHVSSDYVFDGT-REMHDE 306 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK-ERR 170 PL +YG+SK AG+ V S + ILR++WV F + R+AK E Sbjct: 307 SEGFAPLGVYGQSKAAGDIAV-SNAPRHYILRSSWVIGEGHNFVKTMMGLSGRVAKGELG 365 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +++VV DQ+G T +A AI + + + G + +T G SWAD A +F Sbjct: 366 KVTVVDDQYGRLTFTRDMAEAIFHLLDS------DAAYGTYDLTGSGSVRSWADIARMVF 419 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + GG KV I T +Y A RP YS L+ +K+ T +++ W+E ++ Sbjct: 420 DLANGNGG---KVEPISTAEYFANAKNPVSPRPTYSALNLAKIEAT-GLKVPDWEESLKA 475 Query: 286 ILVN 289 + Sbjct: 476 YVTK 479 >gi|326772073|ref|ZP_08231358.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces viscosus C505] gi|326638206|gb|EGE39107.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces viscosus C505] Length = 341 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 150/297 (50%), Gaps = 23/297 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ ++L ++ Q E V P++D+ +S+ S D+IIN AA+ Sbjct: 59 RVLVTGANGQLGRALMTLLPQAGFEPTGVDLPEVDISDAAAMSSWDWS-GYDIIINAAAW 117 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG + E Sbjct: 118 TNVDGAET-PEGRRLSWRANTVGPVNLARAAVRHGLTLVHLSTEYTFDGATAL-HTEEET 175 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK AG+ V S + ++RT+WV G NF+ +ML LA+ SVV D Sbjct: 176 PSPLGVYGQSKAAGDAAV-SVCPQHYLVRTSWVVGD-GKNFVKTMLSLAERGITPSVVAD 233 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T A +A II + E G ++++ DG VSWAD A+ ++ + G Sbjct: 234 QTGRLTFASDLAAGIIHLLTAGAE------FGTYNLSGDGPIVSWADVAKRVYERA---G 284 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T++Y A RP S LD +K+ T + E + L + Sbjct: 285 HSPDEVTAVTTEEYYAGQEGIAPRPLSSALDLAKIKAT-GFTPADSTERLEAYLQGL 340 >gi|300779957|ref|ZP_07089813.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium genitalium ATCC 33030] gi|300534067|gb|EFK55126.1| probable dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium genitalium ATCC 33030] Length = 449 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 22/292 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ ++L + VG + DL S IIN AA+ Sbjct: 173 RVLVTGANGQLGRALRPLLPHGD---FVGHDEFDLTSDVSTLMSARDWTQYSAIINAAAF 229 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 V+ AE + A+++NA G +A+ A + + +STDYVFDG E + Sbjct: 230 NDVNGAEGDGRNGAWAVNALGPAKLAQIAGRYDLTLVNVSTDYVFDGTVGV-HTEDEAPS 288 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG SK AGE + + ++RT+WV+ G+ F+ +M RLA+E VV DQ Sbjct: 289 PLSVYGASKAAGEAA-TAACPRHYLVRTSWVFGDGGN-FMTTMARLAREDASPQVVSDQR 346 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +AR I+ + + E G++++T+ G S + A +F GG Sbjct: 347 GRPTWAEDLARGIVHLLDSGAE------YGVYNITSGGDTASRDEIAMAVF---IACGGD 397 Query: 240 YSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 S V + T QY A RPA S L K+ T + + W+ + L Sbjct: 398 PSSVQPVTTAQYQEAFGPEAPRPAESTLALDKIEAT-GFKPTNWRAALAMYL 448 >gi|162451327|ref|YP_001613694.1| hypothetical protein sce3055 [Sorangium cellulosum 'So ce 56'] gi|161161909|emb|CAN93214.1| hypothetical protein with NDP-sugar oxidoreductase domain [Sorangium cellulosum 'So ce 56'] Length = 729 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 124/289 (42%), Gaps = 18/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + ++ + +C + + +GR ++D+ P +P ++N A + Sbjct: 450 ILITGAKGTLGRAFARLCALRGLPHRTIGRDEMDIADPASVERALDRLAPWAVVNTAGFV 509 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE EP NA G +A A + S D VFDG R+P E P PL Sbjct: 510 RVDEAEREPHRCERENALGPAVLAIACRRRDARLVTFSADLVFDGAQRSPYVETDPARPL 569 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK E V + +++RTA + + NF+ + LR E R D Sbjct: 570 NVYGRSKATAEWNVLAILPEALVVRTAAFFGPWDEANFVGAALRALGEGRSFHAADDVIV 629 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A + + + RGI+H+ A+ SWA+ A +A P Sbjct: 630 SPTYVPDLVHATLDLLID-------GERGIWHL-ANRDATSWAELAS---RSAALARVPA 678 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ R ++ A RP YS L + + + + + + + Sbjct: 679 TRLVRCPSRALGLAAPRPRYSALGSGR-----GLLLPSLDDALTRYVAE 722 >gi|320095968|ref|ZP_08027584.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977099|gb|EFW08826.1| dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 178 str. F0338] Length = 472 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 21/281 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L E V P++ + + F S DV++N AA+ Sbjct: 191 RVLVTGANGQLGRELMRQLPAAGFEATGVDLPEVSIADADQMEA-FDWSSFDVVVNAAAW 249 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE P+ ++ NA G +A+A S G+ ++IS++YVFDG + E Sbjct: 250 TDVDGAET-PDGRRASWLANATGPANLARACASHGLTLVHISSEYVFDGSAEV-HPEDEA 307 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK G+ V + +Y++ RTAWV G NF+ +M LA VV D Sbjct: 308 PSPLGVYGQSKAGGDAAVLAAPKHYLV-RTAWVVGD-GKNFIRTMASLACSGVRPQVVDD 365 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A II + S + G +++T +G +SWAD A ++ G Sbjct: 366 QVGRLTFTTDLAAGIIHLL------STRAPHGTYNLTGEGPVMSWADVATRVYEL---LG 416 Query: 238 GPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIR 275 S+V R+ T+QY A RP S LD +K+ T Sbjct: 417 HDASEVTRVSTEQYYADKGGAPRPLSSVLDLAKIEATGFTP 457 >gi|330468517|ref|YP_004406260.1| dTDP-4-dehydrorhamnose reductase [Verrucosispora maris AB-18-032] gi|328811488|gb|AEB45660.1| dTDP-4-dehydrorhamnose reductase [Verrucosispora maris AB-18-032] Length = 290 Score = 228 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 11/286 (3%) Query: 6 IGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 G G + + + D + V R +D+ A DV++N AA+T V Sbjct: 2 TGAGGMLGRDAVEVLAGHPDHTVTAVTRTQLDVTDAAAVADAVAGH--DVVLNAAAWTDV 59 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE + A ++N +A A + G +++STDYVF G + TP E +PT P+N Sbjct: 60 DGAEQDEAAATAVNGAAVAHLATACATHGAYLLHVSTDYVFAGDADTPYPEDAPTAPVNA 119 Query: 124 YGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG+SKL GE+ V + ++RTAW+Y G NF+ +ML LA++R + VV DQ G P Sbjct: 120 YGRSKLVGEQAVRRLLPDRGHVVRTAWLYGTHGRNFVTTMLGLAQQRDFLDVVDDQRGQP 179 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + +A ++++A + GI+H T G +W A +F A G + Sbjct: 180 TWSYALAEQLVRLAE--AARDGRARPGIWHGTC-TGETTWYGLARAVF---ALHGLDPDR 233 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + ++P A RPAYS L + + W + Sbjct: 234 IRPTTSSRFPRPAARPAYSVLRHGRWTEAGLSPLPDWHTTLTEAFT 279 >gi|329944287|ref|ZP_08292546.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 170 str. F0386] gi|328531017|gb|EGF57873.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 170 str. F0386] Length = 311 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 23/297 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ ++L ++ Q + V P++D+ +++ S S DV+IN AA+ Sbjct: 28 RVLVTGANGQLGRALMTLLPQVGFVPTGVDLPEVDISDAAAMSAWDWS-SYDVVINAAAW 86 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE +++ N G +A+AA G+ +++ST+Y FDG E Sbjct: 87 TNVDGAET-PEGRRLSWRANTVGPVNLARAAVQHGLTLVHLSTEYTFDGAIPV-HSEAET 144 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK AG+ V S + ++RT+WV G NF+ +ML LA+ +VV D Sbjct: 145 PSPLGVYGQSKAAGDAAV-SVCPRHYLVRTSWVVGD-GKNFVKTMLSLAERGIAPTVVAD 202 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T A +A II + + E G ++++ G VSWAD A+ ++ + G Sbjct: 203 QTGRLTFASDLAAGIIHLLTSGAE------FGTYNLSGGGPVVSWADVAKRVYERA---G 253 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V + T++Y A RP S LD +K+ T + E + + L + Sbjct: 254 HSPDEVTPVTTEEYYAGQEGIAPRPLSSVLDLAKIKAT-GFTPTDSMERLEDYLSRL 309 >gi|330508400|ref|YP_004384828.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP-6] gi|328929208|gb|AEB69010.1| dTDP-4-dehydrorhamnose reductase [Methanosaeta concilii GP-6] Length = 290 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 130/298 (43%), Gaps = 29/298 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----------IDLLKPKDFASFFLSFS 50 M+ + G +G L+ M + E + G DLL Sbjct: 1 MRIFITGGSGLAGSKLAEMALARGEQVYSGYAHNQPPYGKEVKFDLLDANGIRDTIERMR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDVI++ AA T VD+ E + ++A+ IN EG IA+AA G +YISTDYVFDG R Sbjct: 61 PDVIVHSAALTDVDRCERKKDLAYRINVEGTRTIAEAARKAGSYLVYISTDYVFDG-QRG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLRLA 166 E TNP++ YG SKL GE+ + I RT +Y + NF L +L Sbjct: 120 LYREEEETNPVSYYGLSKLLGEQFCL---DQGCIARTCVIYGSRPASGKVNFALWLLNAL 176 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K +E+ VV DQF TPT +A ++E ++ +L GI+H++ VS DFA Sbjct: 177 KSGKEVRVVTDQFITPTLNSN-------LAAMVLEAANRNLSGIYHLSG-AARVSRYDFA 228 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + + A RP S LD SK + T R E ++ Sbjct: 229 CE---LARAFDIDRRLIIPSQMSDIGWLARRPMDSSLDTSKASRTLKNRPLNLYESLQ 283 >gi|110636916|ref|YP_677123.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC 33406] gi|110279597|gb|ABG57783.1| dTDP-4-dehydrorhamnose reductase [Cytophaga hutchinsonii ATCC 33406] Length = 298 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 32/308 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGR-------------PDIDLLKPKDFASF 45 MK L+ G+NG + Q L S+ ++ +I R +D+ ++ Sbjct: 1 MKILITGSNGLLGQKLVSLLYLKPEITLIATARGANRDEIYEDYIYESMDITSEENVLKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD +I+ AA T VD+ E E N I KA +G +++STD++FD Sbjct: 61 FRKHKPDAVIHTAAMTHVDQCELNKEACVDQNITSVKHIVKACKEVGAFLLHVSTDFIFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLS 161 G R P+ E NP+N YG +K E+ V + + I RT V+ + +L Sbjct: 121 GT-RGPLTEEEIPNPVNYYGWTKWEAEKAVENSGLKWAIARTVLVFGVVQDMSRSNIVLW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + ++++EI+VV DQ+ TPT A +A I N E GIF+++ + +S Sbjct: 180 VKNNLEQKKEINVVNDQWRTPTLAEDLAMGCWLIVKNQAE-------GIFNISGEE-MLS 231 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + A + + + + + + A RP + K + T +E Sbjct: 232 PYELAHKV---ADVWKLDKGLIKQADSSTFTQPALRPPKTGFIIDKAKKQLGYKPHTLEE 288 Query: 282 GVRNILVN 289 G+ ++L Sbjct: 289 GL-DLLKE 295 >gi|319902306|ref|YP_004162034.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] gi|319417337|gb|ADV44448.1| dTDP-4-dehydrorhamnose reductase [Bacteroides helcogenes P 36-108] Length = 311 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 30/307 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFF 46 K L+IG NG + + + + E+ D ID+ K F Sbjct: 16 KVLIIGANGFTGRRILNDLSHNAAYEVTGCSLHDDICPNSGDYHFVRIDIRDCKALNKLF 75 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P +IN +A + D E E A +IN +A+ + I++STD+VFDG Sbjct: 76 EEVQPYAVINTSALSVPDYCEIHHEEAEAINITAVMHLAQHCRTHNSRLIHLSTDFVFDG 135 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 ++ E P+N YGK+KL GE ++A+ N+Y I R VY ++ +L Sbjct: 136 NTKRLYTEEDTPAPVNYYGKTKLEGERQIATICNDYAIARVVVVYGNALPGQHGNIFQLV 195 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + EI VV DQ+ TPT +++ + ++ ++ GI+H+ G ++ Sbjct: 196 ANRLRNNEEIFVVSDQWRTPTFVGDVSQGVEKLINH-------PHNGIYHICG-GDCLTI 247 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 A A + + G S + I T++ K RP +S L K + T EG Sbjct: 248 AGIA---YRVADILGLDRSLICPISTEEMKEKTPRPCFSGLSIEKARKELKYQPHTLDEG 304 Query: 283 VRNILVN 289 +R + + Sbjct: 305 IRLMFRD 311 >gi|315502245|ref|YP_004081132.1| dtdp-4-dehydrorhamnose reductase [Micromonospora sp. L5] gi|315408864|gb|ADU06981.1| dTDP-4-dehydrorhamnose reductase [Micromonospora sp. L5] Length = 288 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 94/290 (32%), Positives = 140/290 (48%), Gaps = 11/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + + L ++ D+ + GR D+D+ DV++N AA Sbjct: 3 RILVTGAGGMLGRDLLAVLRTRPDLSVTAAGRADLDVTDTHAVRDAVGGH--DVVLNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N + A+A A G +++STDYVF G + P E +PT Sbjct: 61 WTDVDGAETRERDATAVNGDAVAALAHACAGSGARLVHVSTDYVFGGDATEPYPEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N YG+SKLAGE VA ++RTAW+Y+ G NF+ +MLRLA ER + VV DQ Sbjct: 121 PVNAYGRSKLAGERAVARLLPETGYVVRTAWLYATHGHNFVTTMLRLAAERDRLDVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + + A ++ A + + G +H TA G +W A +F A RG Sbjct: 181 RGQPTWSYRFAERLV--ALADAALAGDAAPGTYHGTA-AGETTWYGLARAVF---ALRGL 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V + ++P A RP Y L + A W+ + L Sbjct: 235 DPDRVRPTTSDRFPRPAPRPRYGVLAHGRWAAAKLPPPGHWRADLAQALT 284 >gi|302379941|ref|ZP_07268420.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna ACS-171-V-Col3] gi|302312167|gb|EFK94169.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna ACS-171-V-Col3] Length = 281 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 150/289 (51%), Gaps = 16/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G +G+I + L + E++ + +D++ + + F P+VIIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPLEDEVLATDKDIVDIVNSDETSIFARRNRPNVIINCSAL 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P Sbjct: 65 TDPVACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKL GE V ++ + ILRT+W++S ++ + +++ A++ ++ V Q+ Sbjct: 125 TTMYGKSKLMGENFVREFSVKHFILRTSWLFSP-VNHRVEDIIKEAQQTGKVLVPKAQYS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA Q+A I+++ DT GI+H + + G S +FAE I + G Sbjct: 184 SPTSAYQLAEFIVKLM-------DTYDYGIYHASCE-GVASRKEFAEEIL----KIKGID 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I + + HRP ++ L+ L + + + W+ ++ + Sbjct: 232 AEV--IEDENLRVEGHRPDFTALENFLLNTSQIYKFTDWQTSLKKYIEK 278 >gi|225020236|ref|ZP_03709428.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii ATCC 33806] gi|224946980|gb|EEG28189.1| hypothetical protein CORMATOL_00239 [Corynebacterium matruchotii ATCC 33806] Length = 505 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 41/315 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPAAY 60 K L+ G +GQ+ ++L++ + D DL + VIIN AAY Sbjct: 192 KILITGADGQVGRALATQFP---DATLCNHSDFDLTADYQALEDAVNWDEYAVIINAAAY 248 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + +++NA G +A+ A + + ++ STDYVF G + DE +P P Sbjct: 249 TAVDHAEMDRARCWAVNAAGPAKLARLATNHDLTVVHFSTDYVFSGDAPGDQDETTPIAP 308 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK AG+ + + T + I+RT+WV G NF+ +M+RLA+ +VV DQ G Sbjct: 309 SNFYGASKAAGDAAI-ALTTKHYIVRTSWVVGD-GKNFVTTMVRLAQSGAHPAVVNDQVG 366 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T + IA+A + + G++ + G P SWA A +F Sbjct: 367 RLTFSTDIAQATAHLL------AGEHPYGVYGFSNSGQPQSWAQIARRVFEIVQV---DP 417 Query: 241 SKVYRIFTKQYPTK-------------------------AHRPAYSCLDCSKLANTHNIR 275 + V T++Y + A RP SCL +K+ T I Sbjct: 418 NHVTECSTEEYTARVSAQASTASPTPTAPATAAVPTPVLAVRPKNSCLSLAKIEATGFI- 476 Query: 276 ISTWKEGVRNILVNI 290 W+ + + N+ Sbjct: 477 PPLWETQLEEYVRNL 491 >gi|53713484|ref|YP_099476.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] gi|52216349|dbj|BAD48942.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis YCH46] Length = 296 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-----------DLLKPKDFASF 45 MK L+IG NG + + + + G R DI D+ + Sbjct: 1 MKNILIIGANGFTGRRILNDLSVNPIYHVTGCSLRDDICPGKDYRFVRTDIRDENEVRKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD++IN +A + D E A + N IA + G I++STD+VFD Sbjct: 61 FKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSRFIHLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G S E P+N YG +KL E+ +AS +NY I+R VY ++L+L Sbjct: 121 GKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKALPGQHGNILQL 180 Query: 166 ----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + I VV DQ+ TPT I+ + ++ + GI+H+ Sbjct: 181 VANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTA-------NGIYHICGSECLT- 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE + + S + + T++ RP +S L K T +E Sbjct: 233 ---IAEIAYRVADFLKLDRSLIEPVTTEEMKETTPRPRFSGLSIEKAKAEIGYTPRTLEE 289 Query: 282 GVRNIL 287 G+ L Sbjct: 290 GMEASL 295 >gi|229495562|ref|ZP_04389295.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas endodontalis ATCC 35406] gi|229317545|gb|EEN83445.1| dTDP-4-dehydrorhamnose reductase [Porphyromonas endodontalis ATCC 35406] Length = 314 Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%) Query: 24 VEIIRVGRPDIDLLKPKDF-------ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 +I + R DL P+ A F + +++N AAYT VD AE P+ A I Sbjct: 37 HDIYPLSREQFDLAHPETLPPVLERLALRFEHYREIILLNAAAYTQVDLAEIHPKEAEVI 96 Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 N +A+ + I I ISTDYVFDG P P +P+++YG +K EE VA Sbjct: 97 NTIAVDTMARVCARLQIRFIQISTDYVFDGAYDQPYPVDYPPHPISVYGTTKWHAEEAVA 156 Query: 137 SYTN--NYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQ 194 Y I+RT+W+YS + NF +M LA ER E+ VV DQ G P+S +A + Sbjct: 157 RALPLGEYAIVRTSWLYSPYRQNFYRTMWCLAHERSELRVVADQIGAPSSTESVAEQLFL 216 Query: 195 IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 + + H + G SW FA+ I ++ + +V+ I T+ YPT Sbjct: 217 LCSRREALPP-----VLHFV-NRGETSWYGFAQAIVEKAGRSH--FCRVHPITTEDYPTA 268 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 AHRP S L+ S L + N + +W+E +R Sbjct: 269 AHRPRNSRLEVSCLDS--NTPLCSWQEALRLC 298 >gi|255009242|ref|ZP_05281368.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313146992|ref|ZP_07809185.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] gi|313135759|gb|EFR53119.1| dTDP-4-dehydrorhamnose reductase [Bacteroides fragilis 3_1_12] Length = 296 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 30/306 (9%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-----------DLLKPKDFASF 45 MK L+IG NG + + + G R DI D+ Sbjct: 1 MKNILIIGANGFTGRRILNDLSAKPIYNVTGCSLRDDICPGKGYRFVRTDIRDTDAVQRL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD++IN +A + D E A + N I+ A + G I++STD+VFD Sbjct: 61 FNESQPDIVINTSALSVPDYCETHHAEAEATNVTAVETISHACEQYGSRFIHLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G S E +P+N YG +KL E+ VA +NY I+R VY + ++L+L Sbjct: 121 GKSNQLYKEEDEASPVNYYGVTKLKAEKVVADCCSNYAIVRVVVVYGKALTGQHGNILQL 180 Query: 166 ----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 ++ I VV DQ+ TPT I+ + ++ + GI+H+ + Sbjct: 181 VANRLRKGEPIRVVSDQWRTPTFVGDISEGVKKLMFH-------PSNGIYHICGNECLT- 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE + + S + + T++ RP +S L K T +E Sbjct: 233 ---IAEIAYRVADFLKLDRSLIEPVTTEEMQEATPRPRFSGLSIEKAKTEIGYNPHTLEE 289 Query: 282 GVRNIL 287 G+ L Sbjct: 290 GMAASL 295 >gi|171742181|ref|ZP_02917988.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC 27678] gi|171277795|gb|EDT45456.1| hypothetical protein BIFDEN_01287 [Bifidobacterium dentium ATCC 27678] Length = 485 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 34/306 (11%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ +Q E D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVETHGLQGFEFN--DIDTFDFSDPTQYDQFDWSL-YGTIINA 248 Query: 58 AAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE + A+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 249 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEKE-HSET 307 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-------KE 168 PL +YG++K AG+ V + + I+R++WV + F+ +M+ L+ + Sbjct: 308 EAFAPLGVYGQTKAAGDIAV-ANVPRHYIVRSSWVIGEGHN-FVKTMMMLSDRVADPNDQ 365 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E++VV DQ+G T +A AI + E G +++T G SWAD A+ Sbjct: 366 LNEVTVVDDQYGRLTFTTDMAEAIFHLLDTNAE------YGTYNLTGSGAVKSWADIAKA 419 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F E+ G KV I T QY A RP S L+ +K+ T + + W+E + Sbjct: 420 VFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-GLNVPDWEESL 475 Query: 284 RNILVN 289 + + Sbjct: 476 KAYVTK 481 >gi|170743903|ref|YP_001772558.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] gi|168198177|gb|ACA20124.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium sp. 4-46] Length = 297 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 104/292 (35%), Positives = 146/292 (50%), Gaps = 4/292 (1%) Query: 1 MK-CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L++G GQ+ +L V + R +D+ A+ + +IN A Sbjct: 1 MRAILILGGGGQVGTALRHAAWPAGVALHAPSREALDVTDEAAVAAALAERAYAAVINAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVD+AE E A+ +NA +A A GIP + +STDYVFDG +P Sbjct: 61 AYTAVDRAESEVAAAWRLNALAPAILAAATARAGIPLVQVSTDYVFDGSLAGAYPTDAPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 NP ++YG SK GE V + + ++RTAWV S +NF+ +MLRLA ER + VV DQ Sbjct: 121 NPASVYGASKAGGEMAVRTANPRHAVVRTAWVVSPHRANFVKTMLRLAGERDALRVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PTSA +A A+ IA L E+ + G +H + G +W FA I + RG Sbjct: 181 RGCPTSADDLAAALAAIALRLAEDP-AAPGGTYHCV-NAGATTWCGFARAIMAGARARGA 238 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V I T YPT A RPA S L + L+ I W+ + +IL + Sbjct: 239 RAVPVEPIATSSYPTPARRPANSELSTATLSRDFGIVPRPWEAALADILDRL 290 >gi|60681728|ref|YP_211872.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis NCTC 9343] gi|253565473|ref|ZP_04842928.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5] gi|60493162|emb|CAH07943.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis NCTC 9343] gi|251945752|gb|EES86159.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 3_2_5] gi|301163271|emb|CBW22821.1| putative rhamnose biosynthesis-related protein [Bacteroides fragilis 638R] Length = 296 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-----------DLLKPKDFASF 45 MK L+IG NG + + + + G R DI D+ + Sbjct: 1 MKNILIIGANGFTGRRILNDLSVNPIYHVTGCSLRDDICPGKDYRFVRTDIRDENEVRKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD++IN +A + D E A + N IA + G I++STD+VFD Sbjct: 61 FKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSRFIHLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G S E P+N YG +KL E+ +AS +NY I+R VY ++L+L Sbjct: 121 GKSTRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKALPGQHGNILQL 180 Query: 166 ----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + I VV DQ+ TPT I+ + ++ + GI+H+ Sbjct: 181 VANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTA-------NGIYHICGSECLT- 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE + + S + + T++ RP +S L K T +E Sbjct: 233 ---IAEIAYRVADFLKLDRSLIEPVTTEEMKEVTPRPRFSGLSIEKAKAEIGYTPRTLEE 289 Query: 282 GVRNIL 287 G+ L Sbjct: 290 GMEASL 295 >gi|183602162|ref|ZP_02963530.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium animalis subsp. lactis HN019] gi|219683072|ref|YP_002469455.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp. lactis AD011] gi|241191394|ref|YP_002968788.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196800|ref|YP_002970355.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218655|gb|EDT89298.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium animalis subsp. lactis HN019] gi|219620722|gb|ACL28879.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium animalis subsp. lactis AD011] gi|240249786|gb|ACS46726.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251354|gb|ACS48293.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177519|gb|ADC84765.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis BB-12] gi|295794387|gb|ADG33922.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium animalis subsp. lactis V9] Length = 483 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 34/304 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI---IRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ QS+ V++ ++ + D P + + S IIN Sbjct: 190 RTLVTGANGQLGQSIRKY-VEEHDLKGFEFTDIDEFDFSDPAAYEGYDWSL-YGTIINAG 247 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A+TAVDKAE PE A+ NA G +AK A + +++S+DYVFDG ++ DE Sbjct: 248 AFTAVDKAET-PEGRVTAWKANALGPALLAKVATEHNLTLVHVSSDYVFDGTAKV-HDED 305 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE------- 168 +PL +YG++K AG+ VA+ + I+R++WV + F+ +M+ L+ + Sbjct: 306 EAFSPLGVYGQTKAAGDIAVANA-PKHYIVRSSWVIGNGHN-FVKTMMMLSNKVSDPNDA 363 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E++VV DQ+G T +A AI + D G + +T G VSWA A Sbjct: 364 LNEVTVVDDQYGRLTFTDDMAAAIFHLLD------DEDPYGTYDLTGSGDVVSWAQIAAE 417 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F + G KV I T+QY A RP S LD +K+ T + W + + Sbjct: 418 VFAMTNGNG---DKVRPISTEQYFESAKAPVSPRPTNSTLDLAKIEET-GYETTDWHDSL 473 Query: 284 RNIL 287 + + Sbjct: 474 KAYV 477 >gi|114048177|ref|YP_738727.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] gi|113889619|gb|ABI43670.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] Length = 364 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 89/348 (25%), Positives = 150/348 (43%), Gaps = 64/348 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-----DVEIIRVG---RPDIDLLKPKDFASFFLSFSPDVI 54 L+ G + Q++++L + + D + RV +D+ + + F F+P+ + Sbjct: 14 VLLTGADSQLSKALLRVLAKAANRFDGRVFRVDALSHAQLDICDKQSVEAAFAHFNPEWV 73 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS------ 108 IN AAY AVD+AE A+ +N+ G +A G ++IS+DYVF G Sbjct: 74 INCAAYNAVDRAETAAVEAYRVNSLGPELLASECALTGARLVHISSDYVFSGEQAEVASQ 133 Query: 109 -----------------------RTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVI 144 + E + PL++YG+SKLAGE+ V V+ Sbjct: 134 ALNQCGITRSGLIESGLIESGLTEGGLTENAMPAPLSVYGQSKLAGEQAVLRILAERAVV 193 Query: 145 LRTAWVYSIFGSNFLLSMLRLAK---ERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +RTAW+Y + G NF+ +MLRL + + ++V+ DQ G+PT A +A I Q+ + + Sbjct: 194 IRTAWLYGVDGHNFVKTMLRLMAAAPDAQPLTVINDQIGSPTWADALAHLIWQLIASPLN 253 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV--YRIFTKQYPTK----- 254 G+FH G SW +FA I ++ V I + Y K Sbjct: 254 VGCG--TGLFHYAGQ-GQCSWYEFALEIQRQALALKLLDKTVPISAIDSLSYAAKALEKG 310 Query: 255 ---AHRPAYSCLDCSKLANTHNIR----------ISTWKEGVRNILVN 289 A RP+YS L+ ++ + W+ ++ +L + Sbjct: 311 NKLASRPSYSALNSDRVRQCLTGQNSTSTHSSELWRDWRSQLKAMLED 358 >gi|327260693|ref|XP_003215168.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like [Anolis carolinensis] Length = 334 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 20/298 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-------PDIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ ++ + G ++LL + F P V Sbjct: 30 RVLVTGATGLLGRAVYKEFKENRWNAVGCGYSRARPLFEQVNLLDATAVHNLIQGFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 II+ AA D + +P+ A +N +G IAK A + +YISTDYVFDG P Sbjct: 90 IIHCAAERRPDVVDSQPDAASRLNVVASGNIAKEAAQVRAFLVYISTDYVFDGT-DPPYK 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLSMLRLAKER 169 E NPLN+YG++KL GE+ V + +LR +Y S + ++ Sbjct: 149 ENDVPNPLNLYGRTKLEGEKAVLQNNKDAAVLRIPILYGEVERLDESAVTVIFDKVQFNN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A ++N S++G FH + + ++ + A Sbjct: 209 KSANMDHWQQRFPTYVKDVASVCRQLAEKRMQN--PSIKGTFHWSGNE-QLTKFEMARA- 264 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + I T A RP + LDCS+L + + ++ G++ L Sbjct: 265 --MADAFNLPSSHLRPI-TDGPVVGALRPKNAQLDCSRLRMLGIEQHTPFRVGIKESL 319 >gi|296242300|ref|YP_003649787.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM 11486] gi|296094884|gb|ADG90835.1| dTDP-4-dehydrorhamnose reductase [Thermosphaera aggregans DSM 11486] Length = 306 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 31/303 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------------IDLLKPKDFASFFLS 48 M+ LV G G + ++ + + ++L P+ S Sbjct: 9 MRVLVTGGTGLLGYWIAETYSSKGFKVYATYNEKNPPGLEAAWIKLNLEDPESIISVVRE 68 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD+I++ AAYT VD E E A+ +N G A+A+A IY+STDYVF+G Sbjct: 69 VRPDIIVHSAAYTDVDGCEVNKEKAYRVNYLGTEALARAGRETDY-FIYVSTDYVFNGEK 127 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFG---SNFLLSMLR 164 E P+N YG SKL GE V + N VI+R + +Y NF + +L Sbjct: 128 GL-YREEDTPAPVNYYGLSKLLGEVAVRAILPKNSVIVRVSGLYGYSPTGKKNFGVIVLE 186 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + DQ+ +PT ++ + ++ DT G+ H+ G +S + Sbjct: 187 RLLRGENVEAFIDQWLSPTYTRFLSEILAKLV-------DTKPTGVLHIA--GERLSRYE 237 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA + G + V + A RP S L+ +K A + + + ++ Sbjct: 238 FAR---LFAEVLGVGENLVKPRPLESVNLPARRPRDSSLNTAK-ARVLGLSLPPVPDCLK 293 Query: 285 NIL 287 +++ Sbjct: 294 DMV 296 >gi|311742181|ref|ZP_07715991.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272] gi|311314674|gb|EFQ84581.1| dTDP-4-dehydrorhamnose reductase [Aeromicrobium marinum DSM 15272] Length = 468 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 22/295 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G +GQ+ Q+L + D+DL +D D IIN AAYT Sbjct: 188 RTLVTGADGQLGQALRRALAGADHVEFTDVGDLDLT--QDLTEARPWRQYDTIINAAAYT 245 Query: 62 AVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 AVD AE + A+ +N + +A A I +++S+DYVFDG E P + Sbjct: 246 AVDTAETLEGRRDAWRVNVDSVSNLAAVAARNQITVVHVSSDYVFDGTVEE-HPEDEPFS 304 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K A + V + + ++RT+WV + F+ +M LA + +VV DQF Sbjct: 305 PLGVYGQTKAAAD-AVIATVPRHYVVRTSWVIGDGAN-FVRTMASLADRGIDPAVVDDQF 362 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T +A I+ + + E G ++++ G SWA A+ +F + G Sbjct: 363 GRLTFTDDLAAGILHLVDSGAE------YGTYNLSNTGPVSSWAAVAKRVFELA---GHD 413 Query: 240 YSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V + T++Y + RP +S L KL T E ++ L Sbjct: 414 PARVSPVSTEEYFAGKDALVSPRPRHSALSLDKLTAT-GFHARDADEALQEYLAR 467 >gi|301064144|ref|ZP_07204591.1| putative dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] gi|300441764|gb|EFK06082.1| putative dTDP-4-dehydrorhamnose reductase [delta proteobacterium NaphS2] Length = 291 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 16/293 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L++G G + + Q+ E+I G+ ++D++ F + SPDV++N Sbjct: 1 MKILILGATGGLGSDCRKVLGQEHEVICPGKEEVDVVSWDVVIEAFDTISPDVVLNCVGL 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR--TPIDEFSPT 118 T +D E +P IN EG +A+++ +++S +VFDG P E Sbjct: 61 TDLDTCETDPFALRKINVEGPRNLAQSSARFECKIVHVSCAHVFDGRKAMPQPYFEDDAP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER--REISVVC 176 NPL+ YGKSKL E V + NY+I+R+ W+Y I G NF+ S++R A + + Sbjct: 121 NPLSAYGKSKLESETAVRGNSPNYIIIRSNWLYGIHGDNFVKSVVRHAVRGVSAPMQLPD 180 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQFG PT ++A + E + RG +H T+ G S + A+Y+ + + Sbjct: 181 DQFGAPTWNH-------RLALQIRELLNKDGRGSYHATS-YGYCSLYELAQYVLGKLRLK 232 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + P L+ + W++ + L Sbjct: 233 AA----IEACSLSALSNGHLLPVNCVLENRLSKKQGVNVMVNWEKDLDTFLEQ 281 >gi|19551582|ref|NP_599584.1| dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme [Corynebacterium glutamicum ATCC 13032] gi|62389231|ref|YP_224633.1| dTDP-4-dehydrorhamnose 3,5-epimerase, dTDP-dehydrorhamnose reductase [Corynebacterium glutamicum ATCC 13032] gi|21323098|dbj|BAB97726.1| dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Corynebacterium glutamicum ATCC 13032] gi|41324565|emb|CAF19047.1| DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, dtdp-dehydrorhamnose reductase [Corynebacterium glutamicum ATCC 13032] Length = 453 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 141/292 (48%), Gaps = 25/292 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV+G GQ+ +L + + V R ++D+ A + +S IIN AAYT Sbjct: 182 KVLVVGAGGQLGTALRAQFP---DAEFVTRQELDITSDLTEARAWKQYS--TIINAAAYT 236 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD+AE + A+ INA +A A + +++S+DYVFDG + + DE +P +PL Sbjct: 237 AVDQAEHDRAAAWDINAAAVANLATIARDNNLTLVHVSSDYVFDGAAES-YDENAPFSPL 295 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG+SK AG+ A+ + I+RT+WV G+NF+ +M L + SVV DQ G Sbjct: 296 GVYGQSKAAGDIA-ATTAPRHYIVRTSWVIGD-GNNFVRTMKSLDERGIAPSVVDDQIGR 353 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 + IA I + G +++T G P SWAD A +F + Sbjct: 354 LSFTEDIAAGIAHLLEVGAA------YGTYNLTNTGEPASWADVARAVFS-------DPT 400 Query: 242 KVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 KV + T +Y A RP S LD K+ T TW+ + + L + Sbjct: 401 KVTGVSTAEYFANKDAAPRPLNSVLDLGKIEAT-GFSAPTWQTRLNDYLKEL 451 >gi|303234358|ref|ZP_07320997.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna BVS033A4] gi|302494474|gb|EFL54241.1| putative dTDP-4-dehydrorhamnose reductase [Finegoldia magna BVS033A4] Length = 281 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 78/289 (26%), Positives = 149/289 (51%), Gaps = 16/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G +G+I + L + E++ + +D++ + + F P+VIIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPLEDEVLATDKDIVDIVNSDETSIFARRNRPNVIINCSAL 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P Sbjct: 65 TDPVACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKL GE V ++ + ILRT+W++S ++ + +++ A++ ++ V Q+ Sbjct: 125 TTMYGKSKLMGENFVREFSVKHFILRTSWLFSP-VNHRVEDIIKEAQQTGKVLVPKAQYS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA Q+A I+++ T GI+H + + G S +FAE I + G Sbjct: 184 SPTSAYQLAEFIVKLM-------STYDYGIYHASCE-GVASRKEFAEEIL----KIKGIN 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I + + HRP ++ L+ L + + + W+ ++ + Sbjct: 232 AEV--IEDENLRVEGHRPDFTALENFLLNTSQIYKFTDWQTSLKKYIEK 278 >gi|23335975|ref|ZP_00121205.1| COG1091: dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum DJO10A] gi|189440431|ref|YP_001955512.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum DJO10A] gi|189428866|gb|ACD99014.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum DJO10A] Length = 483 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++ + +E + D PK + ++ S IIN A Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDIDEFDFSDPKAYEAYDWSL-YGTIINAGA 249 Query: 60 YTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 YTAVDKAE A+ NA+G +AK A I +++S+DYVFDG ++ E Sbjct: 250 YTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKE-HTETEA 308 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------AKERR 170 PL +YG++K AG+ VA+ + ILR++WV + F+ +M+ L A + Sbjct: 309 FAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGEGHN-FVKTMMMLSNKVADPADKLE 366 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +++VV DQ+G T +A AI + + + G +++T G SWAD A +F Sbjct: 367 QVTVVDDQYGRLTFTRDMAEAIFHLLDSH------APYGTYNLTGSGAVKSWADIAAEVF 420 Query: 231 WESAERGGPYSKVYRIFTKQYPTKA-----HRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G SKV I T +Y A RP S LD +K+ + W+E ++ Sbjct: 421 DLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEA-GYVPADWEETLKT 476 Query: 286 ILVN 289 + Sbjct: 477 YVQK 480 >gi|170516928|gb|ACB15402.1| RmlCD [Bifidobacterium longum] Length = 483 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++ + +E + D PK + ++ S IIN A Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDIDEFDFSDPKAYEAYDWSL-YGTIINAGA 249 Query: 60 YTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 YTAVDKAE A+ NA+G +AK A I +++S+DYVFDG ++ E Sbjct: 250 YTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKE-HTETEA 308 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------AKERR 170 PL +YG++K AG+ VA+ + ILR++WV + F+ +M+ L A + Sbjct: 309 FAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGEGHN-FVKTMMMLSNKVADPADKLE 366 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +++VV DQ+G T +A AI + + + G +++T G SWAD A +F Sbjct: 367 QVTVVDDQYGRLTFTKDMAEAIFHLLDSH------APYGTYNLTGSGAVKSWADIAAEVF 420 Query: 231 WESAERGGPYSKVYRIFTKQYPTKA-----HRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G SKV I T +Y A RP S LD +K+ + W+E ++ Sbjct: 421 DLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEA-GYVPADWEETLKT 476 Query: 286 ILVN 289 + Sbjct: 477 YVQK 480 >gi|315606109|ref|ZP_07881140.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces sp. oral taxon 180 str. F0310] gi|315312391|gb|EFU60477.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Actinomyces sp. oral taxon 180 str. F0310] Length = 475 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 21/281 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G NGQ+ + L + + V P++ + + A+ DV+IN AA+ Sbjct: 193 RALVTGANGQLGRELMAALPAAGFSVTGVDLPEVSISDAQQVAALPWD-DIDVVINAAAW 251 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VD AE PE ++ NA G +A+ A + G+ ++IST+YVFDG + E Sbjct: 252 TNVDGAET-PEGRRASWQANATGPALLAREATAHGVTVVHISTEYVFDGTQEVHV-EDEA 309 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK G+ VAS T + I+RT+WV G NF+ +M LA++ SVV D Sbjct: 310 PSPLGVYGQSKAGGDAAVAS-TPRHYIVRTSWVVGD-GKNFIKTMASLARQGVSPSVVSD 367 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A II + + + G ++++ +G +SWA+ A +F G Sbjct: 368 QVGRLTFTSDLAAGIIHLLTS------DAPFGTYNLSGEGPVMSWAEVAARVFELC---G 418 Query: 238 GPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIR 275 + V + T++Y A RP S LD SK+ T Sbjct: 419 RERADVTFVTTEEYFAGRDAAPRPLSSVLDLSKIEATGFTP 459 >gi|302865681|ref|YP_003834318.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC 27029] gi|302568540|gb|ADL44742.1| dTDP-4-dehydrorhamnose reductase [Micromonospora aurantiaca ATCC 27029] Length = 288 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 93/290 (32%), Positives = 140/290 (48%), Gaps = 11/290 (3%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G G + + L ++ D+ + GR D+D+ DV++N AA Sbjct: 3 RILVTGAGGMLGRDLLAVLRTRPDLSVTAAGRADLDVTDAHAVRDAVGGH--DVVLNAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 +T VD AE A ++N + A+A A G +++STDYVF G + P E +PT Sbjct: 61 WTDVDGAETRERDATAVNGDAVAALAHACAGSGARLVHVSTDYVFAGDATEPYPEDAPTG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+N YG+SKLAGE VA ++RTAW+Y+ G NF+ +MLRLA ER + VV DQ Sbjct: 121 PVNAYGRSKLAGERAVARLLPETGYVVRTAWLYATHGHNFVTTMLRLAAERDRLDVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT + + A ++ A + + G +H TA G +W A +F A RG Sbjct: 181 RGQPTWSYRFAERLV--ALADAALAGDAAPGTYHGTA-AGETTWYGLARAVF---ALRGL 234 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V + ++P A RP Y L + + W+ + L Sbjct: 235 DPDRVRPTTSDRFPRPAPRPRYGVLAHGRWSAAKLPPPGHWRADLAQALT 284 >gi|68536735|ref|YP_251440.1| hypothetical protein jk1647 [Corynebacterium jeikeium K411] gi|68264334|emb|CAI37822.1| rmlD [Corynebacterium jeikeium K411] Length = 274 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 141/294 (47%), Gaps = 28/294 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINPA 58 M LV G +GQ+ ++L + + + VGR DL SF L+ DV I+N A Sbjct: 1 MSVLVFGASGQVGRALLRLRP---DFVPVGRAHADLAVAGSVDSFLLTPPSDVEAIVNLA 57 Query: 59 AYTAVDKAEDEPEIA---FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-- 113 A+TAVD AE PE A +NA G IA A +P ++STDYVF G + Sbjct: 58 AFTAVDDAEK-PENASVVHQVNAVAPGRIASWAQVHEVPMWHVSTDYVFSGNLPVGCENP 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 PLN YG+SKL GE +V + + ++RT WVY G NF +M RLA+ + Sbjct: 117 VDGQPGPLNAYGRSKLEGERRVLNLGGH--VVRTGWVYDATGRNFATTMARLARAGVNPT 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ+G PT +A + + + I H+T G +W FA IF Sbjct: 175 VVDDQYGRPTHVDVLAAELAAMVDGRQSPA------ISHVTGSGPLTTWCGFAREIF--- 225 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A G ++V + + +YPT A RP S L ++ T + W++ +R L Sbjct: 226 ATLGHDPARVKAVPSSEYPTPARRPHNSAL---QIPATG---LPAWQDSLRAAL 273 >gi|305679681|ref|ZP_07402491.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium matruchotii ATCC 14266] gi|305660301|gb|EFM49798.1| putative dTDP-4-dehydrorhamnose reductase [Corynebacterium matruchotii ATCC 14266] Length = 482 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 139/315 (44%), Gaps = 41/315 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLL-KPKDFASFFLSFSPDVIINPAAY 60 K L+ G +GQ+ ++L++ + D DL + VIIN AAY Sbjct: 169 KILITGADGQVGRALATQFP---DATLCNHSDFDLTADYQALEDAVNWDEYAVIINAAAY 225 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD AE + +++NA G +A+ A + + ++ STDYVF G + DE +P P Sbjct: 226 TAVDHAEMDRARCWAVNAAGPAKLARLATNHDLTVVHFSTDYVFSGDAPGDQDETTPIAP 285 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N YG SK AG+ V + T + I+RT+WV G NF+ +M+RLA+ +VV DQ G Sbjct: 286 SNFYGASKAAGD-AVIALTTKHYIVRTSWVVGD-GKNFVTTMVRLAQSGAHPAVVNDQVG 343 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 T + IA+A + + G++ + G P SWA A +F Sbjct: 344 RLTFSTDIAQATAHLL------AGEHPYGVYGFSNSGQPQSWAQIARRVFEIVQV---DP 394 Query: 241 SKVYRIFTKQYPTK-------------------------AHRPAYSCLDCSKLANTHNIR 275 + V T++Y + A RP SCL +K+ T I Sbjct: 395 NHVMECSTEEYTARVSTQASTASPTPTAPATAAVPTPVLAVRPKNSCLSLAKIEATGFI- 453 Query: 276 ISTWKEGVRNILVNI 290 W+ + + N+ Sbjct: 454 PPLWEARLEEYVRNL 468 >gi|320101334|ref|YP_004176926.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162] gi|319753686|gb|ADV65444.1| dTDP-4-dehydrorhamnose reductase [Desulfurococcus mucosus DSM 2162] Length = 298 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 30/305 (9%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIR------------VGRPDIDLLKPKDFASFFL 47 M+ LV G G + + E+ V ++L K A Sbjct: 1 MRILVTGGTGLLGLWVTKVFLERGYEVYASHHERKPVGLDGVTWEQMNLEDFKSVADTVK 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD II+ AA+T VD E++ E+A+ +N IA+ A + +YISTDYVFDG Sbjct: 61 RVKPDAIIHTAAFTDVDGCEEKKELAYRVNYLATRIIAETARELNAYLVYISTDYVFDG- 119 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLR 164 R EF P+N YG +KL GE V + +I+R + +Y NF L L Sbjct: 120 ERGMYREFDAPAPVNYYGLTKLLGEVAVNTLAPRSLIVRVSGLYGFSPTGKRNFGLVALE 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 ++ DQ+ +PT +A I + + G+ H+ G S + Sbjct: 180 KLMNNEQVDAFHDQYLSPTYVRPLAERIADMVKR-------EVVGVIHVA--GERASRYE 230 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA + G P V + K +A RP S LD + A+ + I E ++ Sbjct: 231 FAS---KLAEALGVPRDLVKKTSIKNAGLRARRPRDSSLDTGRAASM-GLSIPPMNECIK 286 Query: 285 NILVN 289 + + + Sbjct: 287 SFIND 291 >gi|29346135|ref|NP_809638.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|253568441|ref|ZP_04845852.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] gi|29338029|gb|AAO75832.1| dTDP-4-dehydrorhamnose reductase [Bacteroides thetaiotaomicron VPI-5482] gi|251842514|gb|EES70594.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 1_1_6] Length = 302 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 79/314 (25%), Positives = 123/314 (39%), Gaps = 40/314 (12%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFA 43 MK ++IG NG + + + + G PDI D+ Sbjct: 1 MKNIIIIGANGFTGRQILNDLSSKAQYKVTGCSLHPDILPKNGGNYHFITTDIRDEAVVK 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F PDV+IN +A + D E E A+ N +A +S I++STD+V Sbjct: 61 QLFKDVQPDVVINCSALSVPDYCETHHEEAWLTNVTAVEQLAHLCESYKSRFIHLSTDFV 120 Query: 104 FDG----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 FDG S E S P+N YG +K GEEKV +NY I R VY Sbjct: 121 FDGKIDEKSGQLYTEKSLPAPVNYYGFTKWKGEEKVTEICSNYAIARVEIVYGKALPGQH 180 Query: 160 LSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 ++++L +EI VV DQ+ TPT ++ + + N + GIFH+ Sbjct: 181 GNIVQLVMNRLNAGQEIRVVSDQWRTPTYVGDVSAGVQHLVEN-------AANGIFHICG 233 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + AE F + S V+ T++ RP +S + +K + Sbjct: 234 EECLT----IAEIAFQVADYMKLDRSLVHPATTEEMQEATPRPRFSGMSIAKARTILGYQ 289 Query: 276 ISTWKEGVRNILVN 289 +++IL+ Sbjct: 290 PRK----LKDILME 299 >gi|306822149|ref|ZP_07455531.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC 27679] gi|304554531|gb|EFM42436.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium ATCC 27679] Length = 485 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 144/306 (47%), Gaps = 34/306 (11%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ +Q E D P + F S IIN Sbjct: 192 RTMVTGCNGQLGHAIRDYVETHGLQGFEFN--DIDTFDFSDPTQYDQFDWSL-YGTIINA 248 Query: 58 AAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE + A+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 249 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEKE-HSET 307 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-------E 168 PL +YG++K AG+ VA+ + I+R++WV + F+ +M+ L+ + Sbjct: 308 EAFAPLGVYGQTKAAGDIAVANA-PRHYIVRSSWVIGEGHN-FVKTMMMLSNRVADPNDQ 365 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E++VV DQ+G T +A AI + E G +++T G SWAD A+ Sbjct: 366 LNEVTVVDDQYGRLTFTTDMAEAIFHLLDTNAE------YGTYNLTGSGAVKSWADIAKA 419 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F E+ G KV I T QY A RP S L+ +K+ T ++ + W+E + Sbjct: 420 VFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-DLSVPDWEESL 475 Query: 284 RNILVN 289 + + Sbjct: 476 KAYVAK 481 >gi|153806520|ref|ZP_01959188.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185] gi|149131197|gb|EDM22403.1| hypothetical protein BACCAC_00784 [Bacteroides caccae ATCC 43185] Length = 305 Score = 225 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 120/316 (37%), Gaps = 42/316 (13%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRP----------------DIDLLKPKD 41 M+ L+IG NG + L + ++D+ Sbjct: 1 MRNILIIGANGFTGRQLLKDLSAHKQYNVTGCSLHSDIFPALENTKKYRFIEVDIRNEAS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F + PDV+IN +A + D E E A+ IN +A I++STD Sbjct: 61 VKELFKAICPDVVINCSALSVPDYCETHHEEAYLINVTAVEQLAHLCKEYQSRFIHLSTD 120 Query: 102 YVFDGL----SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +VFDG + E P+N YG +K GEEKVA +NY I R VY Sbjct: 121 FVFDGKINERTGQLYTEEILPAPVNYYGFTKWKGEEKVADICSNYAIARVEIVYGKALPG 180 Query: 158 FLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 ++++L K +EI VV DQ+ TPT ++ I ++ N GIFH+ Sbjct: 181 QHGNIVQLVMNRLKAGQEIRVVSDQWRTPTFVGDLSDGIQRLIENTA-------NGIFHI 233 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 D AE + + + ++ + T++ RP +S + K Sbjct: 234 CGDECLT----IAEIAYQVADYMKLNRALIHSVTTEEMQESTPRPRFSGMSIEKARTILG 289 Query: 274 IRISTWKEGVRNILVN 289 ++ +L++ Sbjct: 290 YNPRK----LKEVLLD 301 >gi|309802229|ref|ZP_07696337.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium JCVIHMP022] gi|308221112|gb|EFO77416.1| putative dTDP-4-dehydrorhamnose reductase [Bifidobacterium dentium JCVIHMP022] Length = 482 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 91/306 (29%), Positives = 144/306 (47%), Gaps = 34/306 (11%) Query: 2 KCLVIGNNGQIAQSLSSM----CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NGQ+ ++ +Q E D P + F S IIN Sbjct: 189 RTMVTGCNGQLGHAIRDYVETHGLQGFEFN--DIDTFDFSDPTQYDQFDWSL-YGTIINA 245 Query: 58 AAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE + A+ NA+G +A A I +++S+DYVFDG+ + E Sbjct: 246 GAYTAVDKAETDEGRPIAWKANAQGPALLAGIAKEHNITLVHVSSDYVFDGVEKE-HSET 304 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-------E 168 PL +YG++K AG+ VA+ + I+R++WV + F+ +M+ L+ + Sbjct: 305 EAFAPLGVYGQTKAAGDIAVANA-PRHYIVRSSWVIGEGHN-FVKTMMMLSNRVADPNDQ 362 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E++VV DQ+G T +A AI + E G +++T G SWAD A+ Sbjct: 363 LNEVTVVDDQYGRLTFTTDMAEAIFHLLDTNAE------YGTYNLTGSGAVKSWADIAKA 416 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F E+ G KV I T QY A RP S L+ +K+ T ++ + W+E + Sbjct: 417 VFDETNGNG---DKVKPISTDQYFANAKNPVSPRPTNSALNLAKIERT-DLSVPDWEESL 472 Query: 284 RNILVN 289 + + Sbjct: 473 KAYVAK 478 >gi|220907432|ref|YP_002482743.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219864043|gb|ACL44382.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 738 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 18/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + ++ + +C + + +GR ++D+ P P +IN A Y Sbjct: 460 VLITGATGTLGRAFARICQLRGIPYRLLGRREMDITNPVSVNQVLEELQPWAVINTAGYV 519 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE E + IN +GA +A+A + S+D VFDG P E PL Sbjct: 520 RVDDAEREAHLCRQINTDGAAILAQACVDRNTAYVTFSSDLVFDGQQADPYVESCAVAPL 579 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N+YG SK E+ V +++RT+ + + NF+ + R + D Sbjct: 580 NVYGDSKAIAEQWVLQTHPCALVIRTSAFFGPWDEYNFVTLLRRHLAAGQPFRAADDAIV 639 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT ++ IA +L+ + + G++H+ A+ G VSWA+ A + ++ Sbjct: 640 SPTYVPD----LVHIALDLLIDGEA---GLWHL-ANPGAVSWAELALCVAEQAR---LDA 688 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + T+ A RPAYS L + + +G+ L Sbjct: 689 TLIQPLPTRALGLLAQRPAYSVLGSER-----GNLLPCLSQGLDRYLTE 732 >gi|265763752|ref|ZP_06092320.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] gi|263256360|gb|EEZ27706.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_16] Length = 296 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 77/306 (25%), Positives = 120/306 (39%), Gaps = 30/306 (9%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-----------DLLKPKDFASF 45 MK L+IG NG + + + + G R DI D+ + Sbjct: 1 MKNILIIGVNGFTGRRILNDLSVNPIYHVTGCSLRDDICPGKDYRFVRTDIRDENEVRKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PD++IN +A + D E A + N IA + G I++STD+VFD Sbjct: 61 FKECRPDIVINTSALSVPDYCETHHAEAEATNVTAVETIAHVCEQYGSRFIHLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G S E P+N YG +KL E+ +AS +NY I+R VY ++L+L Sbjct: 121 GKSIRLYKEEDEAIPVNYYGVTKLKAEKIIASICSNYAIVRVVVVYGKALPGQHGNILQL 180 Query: 166 ----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + I VV DQ+ TPT I+ + ++ + GI+H+ Sbjct: 181 VANRLRNGETIRVVSDQWRTPTFVGDISVGVEKLMFHTA-------NGIYHICGSECLT- 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 AE + + S + + T++ RP +S L K T +E Sbjct: 233 ---IAEIAYRVADFLKLDRSLIEPVTTEEMKEATPRPRFSGLSIEKAKAEIGYTPRTLEE 289 Query: 282 GVRNIL 287 G+ L Sbjct: 290 GMEASL 295 >gi|319442845|ref|ZP_07992001.1| hypothetical protein CvarD4_13899 [Corynebacterium variabile DSM 44702] Length = 288 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 88/295 (29%), Positives = 129/295 (43%), Gaps = 27/295 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDL-LKPKDFASFFLS--FSPDVIINPA 58 + V G GQ+ L ++ + R +DL P+ L D +IN A Sbjct: 7 RIAVTGAAGQVGLELVALGG-----TPLTRETLDLASSPEQLREAALRCFAGKDTVINCA 61 Query: 59 AYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL---SRTPID 113 A+T VD AED ++NA G +A AA +G +++STDYVF G + Sbjct: 62 AWTDVDGAEDPANRATVEAVNATAPGILADAATQVGARFLHLSTDYVFPGTPPETGREWA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERR 170 PT PLN YG +K AGE V + ++RTAWV+S +F+ +M LA+ Sbjct: 122 PDDPTGPLNAYGATKAAGERGVLEH--GGTVVRTAWVWSGPHAPGRDFVATMAGLAERGV 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + VV DQ G PT A +A + + L G+ H T G PV+W A +F Sbjct: 180 DPKVVDDQTGRPTYAADLAAG-----LLALSQQEGPLPGVLHYTNSGDPVTWCGLAREVF 234 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 G +V + ++P A RP +S LD + T TW+ + Sbjct: 235 RL---LGHDPQRVTPCGSDEWPAPARRPEWSVLDLAAWRETVG-EPPTWRTALAR 285 >gi|317482685|ref|ZP_07941699.1| RmlD substrate binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|322690053|ref|YP_004209787.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. infantis 157F] gi|291516583|emb|CBK70199.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium longum subsp. longum F8] gi|316915931|gb|EFV37339.1| RmlD substrate binding domain-containing protein [Bifidobacterium sp. 12_1_47BFAA] gi|320461389|dbj|BAJ72009.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. infantis 157F] Length = 483 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++ + +E + D PK + ++ S IIN A Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDIDEFDFSDPKAYEAYDWSL-YGTIINAGA 249 Query: 60 YTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 YTAVDKAE A+ NA+G +AK A I +++S+DYVFDG ++ + E Sbjct: 250 YTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKEHM-ETEA 308 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-------ERR 170 PL +YG++K AG+ VA+ + ILR++WV + F+ +M+ L+ + Sbjct: 309 FAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGEGHN-FVKTMMMLSNKVADPDDKLE 366 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +++VV DQ+G T +A AI + + + G +++T G SWAD A +F Sbjct: 367 QVTVVDDQYGRLTFTKDMAEAIFHLLDSH------APYGTYNLTGSGAVKSWADIAAEVF 420 Query: 231 WESAERGGPYSKVYRIFTKQYPTKA-----HRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G SKV I T +Y A RP S LD +K+ + W+E ++ Sbjct: 421 DLANGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEA-GYVPADWEETLKT 476 Query: 286 ILVN 289 + Sbjct: 477 YVQK 480 >gi|295691453|ref|YP_003595146.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] gi|295433356|gb|ADG12528.1| dTDP-4-dehydrorhamnose reductase [Caulobacter segnis ATCC 21756] Length = 289 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 92/293 (31%), Positives = 146/293 (49%), Gaps = 21/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G NGQ+ +S++ Q ++++ V R +D P F + DV IN A Sbjct: 5 RIALFGANGQLGSDISTLAAQRGLDLVPVTRAQLDASDP---TPSFDGLAFDVAINCVAV 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPTN 119 T VD E +P A +INA AG +A+A + G + +STDYV+ G R P+ E Sbjct: 62 TRVDDCEKDPAPAVAINAHFAGRLARACAARGARLVQVSTDYVYGGQAQREPLSEEIGRA 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-----NFLLSMLRLAKERREISV 174 P+N+YG +K GE+ ++ ++ R A ++ + G+ NF+ +MLRL +ER ++V Sbjct: 122 PVNVYGATKALGEDLARLEHDDVIVARVASLFGVAGASGKGGNFVETMLRLGQERGRLTV 181 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ +PT + AI+ + + + G +H+ + G SW DFA I Sbjct: 182 VADQMMSPTGSWDAGEAILDLI------AAEAPAGDYHVV-NSGAASWWDFAARII---- 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ER G ++V I T +PT A RP YS L +KL+ W + + L Sbjct: 231 ERAGIAAEVAPIPTSDFPTPARRPPYSALSNAKLSTAIGRSTPHWTDALDRYL 283 >gi|256421363|ref|YP_003122016.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] gi|256036271|gb|ACU59815.1| dTDP-4-dehydrorhamnose reductase [Chitinophaga pinensis DSM 2588] Length = 297 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 126/309 (40%), Gaps = 31/309 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-------------PDIDLLKPKDFASF 45 MK L+ G+NG + Q L + ++D ++I GR +L Sbjct: 1 MKVLITGSNGLLGQHLIPVFLEDSRYQVIASGRGPNRLPQQTGYIYEATNLRDATSVKHL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 + PD++I+ AA T VD E ++ + N + KAA++ I++STD+VFD Sbjct: 61 LDKYQPDIVIHAAAMTQVDDCERNKDLCWDTNVAATRYLLKAAEAHNTFFIFLSTDFVFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLS 161 GL P E NP++ YG SK+A E V + I+RT VY I SN + Sbjct: 121 GLK-GPYAEEDAVNPISYYGSSKVAAENMVRGSKLPWAIVRTVLVYGIAADSKRSNIITW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + ++ +++ VV DQ+ TPT +A +A D G FH++ Sbjct: 180 VKNNLEQGKKLKVVDDQWRTPTLVQDLAVGCKLVA-------DKKAAGTFHISGSETLTP 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A + + ++ K + A RPA + K ++ E Sbjct: 233 -YQMA---VQTADYFKLNTQLLEKVDAKSFTQPAKRPAKTGFVIDKAVKELGFAPHSFDE 288 Query: 282 GVRNILVNI 290 G+ + I Sbjct: 289 GLEILSKEI 297 >gi|291457003|ref|ZP_06596393.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium breve DSM 20213] gi|291381414|gb|EFE88932.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium breve DSM 20213] Length = 483 Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++ + +E + D PK + ++ S IIN A Sbjct: 191 RTLVTGCNGQLGHAIRAYAEAHGLEGFEYTDIDEFDFSDPKAYEAYDWSL-YGTIINAGA 249 Query: 60 YTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 YTAVDKAE A+ NA+G +AK A I +++S+DYVFDG ++ E Sbjct: 250 YTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAKE-HTETEA 308 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------AKERR 170 PL +YG++K AG+ VA+ + ILR++WV G NF+ +M+ L A + Sbjct: 309 FAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGE-GRNFVKTMMMLSNKVADPADKLN 366 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +++VV DQ+G T +A AI + + + G +++T G SWAD A +F Sbjct: 367 QVTVVDDQYGRLTFTRDMAEAIFHLLDSH------APYGTYNLTGSGAVKSWADIAAEVF 420 Query: 231 WESAERGGPYSKVYRIFTKQYPTKA-----HRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G SKV I T +Y A RP S LD +K+ + W+E ++ Sbjct: 421 DLTNGNG---SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGEA-GYAPADWEETLKT 476 Query: 286 ILVN 289 + Sbjct: 477 YVQK 480 >gi|218460817|ref|ZP_03500908.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli Kim 5] Length = 206 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 111/204 (54%), Positives = 141/204 (69%), Gaps = 1/204 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPARIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAAGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+++YG+SKLAGE+ VA+ N+VILRTAWVYS FG+NFL +MLRL++ R + VV DQ Sbjct: 121 PISVYGRSKLAGEKAVAAANPNHVILRTAWVYSPFGANFLKTMLRLSETRDHLRVVADQR 180 Query: 180 GTPTSALQIARAIIQIAHNLIENS 203 G PTSAL IA AI+ IA + Sbjct: 181 GCPTSALDIADAILAIATRIGRGP 204 >gi|220904398|ref|YP_002479710.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868697|gb|ACL49032.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 295 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 84/290 (28%), Positives = 145/290 (50%), Gaps = 16/290 (5%) Query: 2 KCLVIG-NNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 K L++G G + Q+L + + ++ +GR D +++ S L+ DV+ N Sbjct: 3 KALILGGATGLLGQALVRVLAARGWQVATLGRQDGNVMDFDFLQSRLLAAHADVVFNAVG 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDGLSRTPIDEFSPT 118 +TAVD AED+P+ A N A+A ++G ++ STD+VF G TP+ E Sbjct: 63 FTAVDAAEDDPDAACEANRTLPDALAHILKTLGNGYLVHYSTDFVFQGQGETPLTEEDEP 122 Query: 119 NPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL++YG +KL GE+ + +LRTAW++ NF+ +++ ++R I+VV D Sbjct: 123 HPLSVYGSTKLEGEQAILRELPERSCVLRTAWLFGPGRKNFVDTIVAACEKRDTINVVHD 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G+PT ++ +A+ +A G++H + G SW + A +A Sbjct: 183 QVGSPTYSMDLAQWSAALAEKQAT-------GLWH-AVNSGQASWCELACESINLAAA-- 232 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V I + Q+P KA RP +S LD +KL + W + +R+ + Sbjct: 233 --SCRVMPIDSAQWPQKAQRPEFSVLDNNKLGAFLGKKPRPWPQALRDYI 280 >gi|325002442|ref|ZP_08123554.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Pseudonocardia sp. P1] Length = 278 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 21/291 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ V+G NGQ+ ++L++ + + + R + + + F DV+ + AAY Sbjct: 1 MRACVLGANGQLGRALTAALP---DAVALTRDGL-DVGDAAAVAAFDFSGVDVVFDAAAY 56 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE +P A+ +NA G +A AA G +++ST+YVFDG + P+ E +P P Sbjct: 57 TAVDRAETDPAAAWRVNALGPAYLAAAAARYGFTLVHVSTEYVFDGTAPGPMPEDTPLAP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L +YG SK AGE V + +V++RT+WV G+ F+ +M RLA++ +VV DQ G Sbjct: 117 LGVYGASKAAGELAVRAGAPRHVVVRTSWVAGDGGN-FVATMARLARDGVSPAVVDDQVG 175 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT A +A A + S +G++H+T DG PVSW A +F A G Sbjct: 176 RPTFAPDLAAA--------LVALAGSGQGVYHVTGDGEPVSWHGVAGEVF---ARCGRDP 224 Query: 241 SKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T +Y P A RPA S LD S+ I + W++G+ L Sbjct: 225 ADVRAVSTAEYAADKPHLARRPANSVLDLSRATGA-GISMPAWRDGLDRYL 274 >gi|170724953|ref|YP_001758979.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] gi|169810300|gb|ACA84884.1| dTDP-4-dehydrorhamnose reductase [Shewanella woodyi ATCC 51908] Length = 327 Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 23/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVG--RPD-----IDLLKPKDFASFFLSFSPD 52 + ++ G+ G + +++ Q E +I G R + +DL + + F PD Sbjct: 24 RVMITGSTGLLGRAVVKQLKQTDEHLLIATGFSRAETGIYKLDLTDEEAISEFIGVHQPD 83 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VII+ AA D +E PE A ++N GA+AKAA G IYISTDYVFDG + Sbjct: 84 VIIHCAAERRPDISEQSPEAALALNLGATGALAKAAKQQGTWLIYISTDYVFDGTEPS-Y 142 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---R 169 E NP+N YG+SKL GE+ + + +++ +LR +Y ++L L + Sbjct: 143 SEADKPNPVNFYGESKLQGEQALLATASDFAVLRLPILYGEVEKIEESAVLVLLNQLLDS 202 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +V +PTS IA AI Q+ ++ D + GI+H +A +S + + Sbjct: 203 TPQNVDNWAVRSPTSTQDIALAIEQMIGLHLKGEDLN--GIYHFSAKQ-TMSKY---QML 256 Query: 230 FWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + I + P A RP L C +L +KEGV+ LV Sbjct: 257 LVLAELFELNSEHLTPISS---PMDTAKRPHDCTLSCQRLTELGIASQIAFKEGVKESLV 313 >gi|237714640|ref|ZP_04545121.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262406505|ref|ZP_06083054.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] gi|229445409|gb|EEO51200.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. D1] gi|262355208|gb|EEZ04299.1| dTDP-4-dehydrorhamnose reductase [Bacteroides sp. 2_1_22] Length = 306 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 127/317 (40%), Gaps = 46/317 (14%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI-------------DLLKPKDFASFFL 47 ++IG NG + + + + G PDI D+ D F Sbjct: 1 MIIGANGFTGRQILNDLSVHTQYKVTGCSLHPDILPNDAGKYRFIETDIRNEADIKRLFE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 PDV+IN +A + D E E A+ N +A + I++STD+VFDG Sbjct: 61 EVQPDVVINCSALSVPDYCETHHEEAYLTNVTAVSQLAVFCEEYKSRFIHLSTDFVFDGK 120 Query: 107 ----------LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 + E P+N YG +K GEEKVA +++ I+R A VY Sbjct: 121 MFVFDEKINEDAGLLYTEEDVPAPVNYYGYTKWKGEEKVAETCSSFAIIRVAIVYGRALP 180 Query: 157 NFLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 ++++L K +EI VV DQ+ TPT ++ + ++ + GIFH Sbjct: 181 GQHGNIVQLVMNRLKAGQEIRVVSDQWRTPTYVGDVSDGVQRLIAH-------PTNGIFH 233 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + D +S A+ A + + G S ++ + T++ RP +S + K Sbjct: 234 ICGDE-CMSIAEIA---YQVADYMGLDRSLIHPVTTEEMNETTPRPRFSGMSIDKARTML 289 Query: 273 NIRISTWKEGVRNILVN 289 + ++ +L N Sbjct: 290 GYEP----QKLKEVLAN 302 >gi|297587791|ref|ZP_06946435.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516] gi|297574480|gb|EFH93200.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 53516] Length = 281 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 16/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G +G+I + L + E++ + +D++ + + F P+VIIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPLEDEVLATDKYIVDIVNSDETSIFARRNRPNVIINCSAL 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P Sbjct: 65 TDPVACQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKL GE V ++ + ILRT+W++S ++ + +++ A++ ++ V Q+ Sbjct: 125 TTMYGKSKLMGENFVREFSVKHFILRTSWLFSP-VNHRVEDIIKEAQQTGKVLVPKAQYS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA Q+A I ++ DT GI+H + + G S DFAE I G Sbjct: 184 SPTSAYQLAEFIAKLM-------DTYDYGIYHASCE-GVASRKDFAEEIL----RIKGID 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I + + HRP ++ L+ L + + + W+ + + Sbjct: 232 AEV--IEDENLRIEGHRPDFTALENFLLNTSQIYKFTDWQTSLEKYIEK 278 >gi|320531363|ref|ZP_08032334.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 171 str. F0337] gi|320136424|gb|EFW28401.1| putative dTDP-4-dehydrorhamnose reductase [Actinomyces sp. oral taxon 171 str. F0337] Length = 311 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 153/298 (51%), Gaps = 23/298 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAA 59 + L+ G NGQ+ ++L ++ Q E V P++D+ +S+ + S+ + IN AA Sbjct: 27 RVLLTGANGQLGRALMALLPQAGFEPTGVDLPEVDISDAAAMSSWDWASYDIIININAAA 86 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +T VD AE PE +++ N G +A+AA + +++ST+Y FDG++ +E S Sbjct: 87 WTDVDGAET-PEGRRLSWRANTVGPVNLARAAVQHDLTLVHLSTEYTFDGVTAVHAEEES 145 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P +PL +YG+SK AG+ V S + ++RT+WV G NF+ +ML LA+ VV Sbjct: 146 P-SPLGVYGQSKAAGDAAV-SVCPRHYLVRTSWVVGD-GKNFVKTMLSLAERGVSPRVVG 202 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T A +A II + + E G ++++ +G VSWAD A+ ++ + Sbjct: 203 DQTGRLTFASDLAAGIIHLLASGAE------FGTYNLSGEGPIVSWADVAKRVYERA--- 253 Query: 237 GGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G +V + T++Y A RP S LD +++ + E + L ++ Sbjct: 254 GHSPDEVTPVTTEEYYAGQEGIAPRPLSSALDLTRIKAA-GFTPADSTERLEAYLQDL 310 >gi|320334071|ref|YP_004170782.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] gi|319755360|gb|ADV67117.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] Length = 723 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 16/282 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L+ G G + Q+ + C + + + R +D+ + P +IN A Y Sbjct: 439 RLLITGATGTLGQAFARACAIRGLPYHLLDRRALDITDEASIHAALDLHQPWAVINTAGY 498 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 VD AE +P N G +A A G+P + S+D VFDG P E NP Sbjct: 499 VRVDDAETDPRNTRE-NTHGPHLLALACAQRGVPLMTFSSDLVFDGTKGAPYVESDAVNP 557 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 LN YG+SK E V + +++RT+ + + NF ++R + R + DQ Sbjct: 558 LNAYGRSKADAERLVLQAAPDALVIRTSAFFGPWDPYNFAAYVVRELQAGRTVRAAGDQV 617 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT + A + + + RGI+H+ A+ G +SWADFA + + G Sbjct: 618 VSPTYVPDLTCAALDLLID-------GERGIWHL-ANAGALSWADFARRV---ARVGGLS 666 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSK--LANTHNIRISTW 279 V + T KA RPA S L + + + ++ I W Sbjct: 667 ERLVEAVSTADLHQKAARPAASALISERGWIMPSLDVAIEHW 708 >gi|292656186|ref|YP_003536083.1| RmlD substrate binding domain superfamily protein [Haloferax volcanii DS2] gi|291370755|gb|ADE02982.1| RmlD substrate binding domain superfamily [Haloferax volcanii DS2] Length = 300 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 119/300 (39%), Gaps = 27/300 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD----------IDLLKPKDFASFFLSF 49 M V G NG + + + ++ + +D+ + + Sbjct: 1 MYAFVTGANGLLGSVVVRTLREQGHAVVGSYHSEEPTFDCPLHQVDITDTERVVELLDEY 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D++IN AAYT VD E PE+A ++N G +A D IP I+ STDYVFDG + Sbjct: 61 DVDLVINCAAYTDVDGCESNPEVATAVNGTAPGDLAAVCDDREIPFIHYSTDYVFDGETD 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSMLR 164 +E P+ YG+SKL GE V + +ILR ++VY G F + Sbjct: 121 GFYEEGDEPAPIQEYGRSKLTGEHAVRDVNPDALILRLSFVYGARGDTSDLVGFPQWVAS 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + DQ TP+ A +A +++ D + G FH+ + +D Sbjct: 181 TLAAGDTVPLFTDQTMTPSRAGNVATTTLELL-------DAGVSGTFHVASQSAVTP-SD 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 F E I GG + + A RP SCLD S + T ++ + Sbjct: 233 FGEKI---CEVIGGDATLIESSVMADLDRPAARPRRSCLDVSNVEGELGCSQPTLEDDLA 289 >gi|260577925|ref|ZP_05845855.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium jeikeium ATCC 43734] gi|258603945|gb|EEW17192.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium jeikeium ATCC 43734] Length = 274 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 100/294 (34%), Positives = 141/294 (47%), Gaps = 28/294 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV--IINPA 58 M LV G +GQ+ ++L + + + VGR DL SF L+ DV I+N A Sbjct: 1 MSVLVFGASGQVGRALLRLRP---DFVPVGRAHADLAVAGSVDSFLLTPPSDVEAIVNLA 57 Query: 59 AYTAVDKAEDEPEIA---FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID-- 113 A+TAVD AE PE A +NA G IA A +P Y+STDYVF G + Sbjct: 58 AFTAVDDAEK-PENASVVHQVNAVAPGRIASWAQVHEVPMWYVSTDYVFSGNLPVGCENP 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 PLN YG+SKL GE +V + + ++RT WVY G NF +M RLA+ + Sbjct: 117 VDGQPGPLNAYGRSKLKGERRVLNLGGH--VVRTGWVYDATGRNFATTMARLARAGVNPT 174 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ+G PT +A + + + I H+T G +W FA IF Sbjct: 175 VVDDQYGRPTHVDVLAAELAAMVDGRQSPA------ISHVTGSGPLTTWCGFAREIF--- 225 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 A G ++V + + +YPT A RP S L ++ T + W++ +R L Sbjct: 226 ATLGHDPARVKAVPSSEYPTPARRPHNSAL---QIPATG---LPAWQDSLRVAL 273 >gi|227486964|ref|ZP_03917280.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093038|gb|EEI28350.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51867] Length = 287 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 27/299 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ V+G GQ+ ++ + + ++GR D+DL++ + D + Sbjct: 1 MEIAVLGEGGQLGTAMQ-LTNPGFTLRKLGRRDVDLVQLAAGDRAATRAAKDAVSGIGCV 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPID 113 +N AA T VDK E +PE A ++N G +A+ + I++STDYVF G R P+ Sbjct: 60 VNCAARTDVDKQETDPEGADAVNHRGVARLAELTRA---RFIHVSTDYVFGSGAPRRPLT 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 T+P +YG SKLAGE+++ + +I RTAW++S +F+ +MLRLA+ Sbjct: 117 PADATDPDTVYGASKLAGEKELIG-RKDTLIARTAWLFSGDRLPSKKDFVSTMLRLARAG 175 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G+PT A +A L E + GI H G +W + A Sbjct: 176 KPARVVDDQAGSPTFAFD-------LATGLWEAVNLEATGIVHAVG-RGQATWYEVACAT 227 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + G V ++++P A RP++S LD S W+ GV + Sbjct: 228 YQAA---GADPDLVQPCTSEEFPQVARRPSWSVLDTSSWELAGFTPFPEWRSGVERAVT 283 >gi|326382032|ref|ZP_08203725.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL B-59395] gi|326199458|gb|EGD56639.1| dTDP-4-dehydrorhamnose reductase [Gordonia neofelifaecis NRRL B-59395] Length = 305 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 16/296 (5%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYT 61 ++G GQ+ ++L + D +++ + DID+ +P DV+IN A YT Sbjct: 6 VFIVGAAGQVGRALLAS-RPDRDVVPLTSDDIDIRSDDSVREALAGIAPGDVVINAAGYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF------DGLSRTPIDEF 115 AVD AE + E A+++NA+G +A + G I++STDY + D + P + Sbjct: 65 AVDAAESDREAAWAVNADGPANLAAVTGASGARLIHLSTDYAYATTALGDDGAPRPFEPA 124 Query: 116 SPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAKERREI 172 T P +YG SKL G+ V++RTAWV+ ++F+ +M+RL ER + Sbjct: 125 DETVEPATVYGASKLEGDRAAQRADPATVVVRTAWVFTGGRGDADFVATMVRLETERDVV 184 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 VV DQ G+PT A +A+A+ ++ L ++ + + H T + G SW + A +F Sbjct: 185 RVVDDQVGSPTYAPDLAKALWELVDRL-DSPALAAGAVVHAT-NAGATSWWELARTVF-- 240 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 AE G +V T ++P A RP+YS L + A + +W++ V + L Sbjct: 241 -AEVGADPERVQPCTTDEFPRPAPRPSYSVLSGASWAAAGLSPLRSWRDAVHDSLT 295 >gi|311063528|ref|YP_003970253.1| RmlC/RmlD dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum PRL2010] gi|310865847|gb|ADP35216.1| RmlC/RmlD dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum PRL2010] Length = 476 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 25/297 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G+NG++ +++ ++ E D+ + +A+ IIN Sbjct: 191 RTMVFGSNGKLGRAIRRYAESHDLRGFEYHDTD--TFDIADAEAYAAIDWDL-YGTIINA 247 Query: 58 AAYTAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AA+TAVD+AE + + A+ N +G +A+ A I ++IS+DYVFDG E Sbjct: 248 AAFTAVDEAETTEGRKNAWRTNVQGVKNLARIAAEHRITLVHISSDYVFDGTKEL-HTED 306 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL++YG++K AG+ V + +LR++WV G NF+ ML LA+ Sbjct: 307 EEFAPLSVYGQTKAAGDALV-ENVPQHYLLRSSWVIGE-GRNFVTRMLGLAQNNAHAEAP 364 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG T +A+AI + + + G ++MT G SW D A +F + Sbjct: 365 SDQFGRLTFTDDMAKAIFHLLDS------NASYGTYNMTGSGRIASWYDIARLVFQTA-- 416 Query: 236 RGGPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + +Y A RP LD SKL T W++ + L Sbjct: 417 -GVDPDTITANSVAEYAREHHAAMRPQNCSLDLSKLEAT-GYHPQNWEQSLTTYLAK 471 >gi|229578479|ref|YP_002836877.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|228009193|gb|ACP44955.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] Length = 274 Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 136/293 (46%), Gaps = 24/293 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 M+ L+ G +GQ+ LS + D+ + + +DL F + PDVII Sbjct: 1 MRILITGASGQLGFELSEVLKGDIVKVYNTKEVQGGYKLDLTNYSAVEDFIIKKRPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N A+ T VDK E E +AF +NAE I +A+ + I+ISTDYVFDG E Sbjct: 61 NTASLTDVDKCEVERSLAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDGKKGL-YKEE 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP+N YG +KL GE SY ++ VI RT+ V+ F + + + KE +E+S Sbjct: 120 DLPNPINYYGLTKLLGETYALSYDDSLVI-RTSGVF--RHKGFPIYVYKTLKEGKEVSAF 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 + +P SA ++A AI ++ GI ++ ++ VS D A I E Sbjct: 177 K-GYYSPISARKLAEAISELIEYRKT-------GILNVASE--RVSRVDLAMKI-KEKFN 225 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 GG +V + A RP S LD SK + + E +R ++V Sbjct: 226 LGGSVKEVDEVK----GWIAKRPFDSSLDISKAKKLLSTDFYSLDENLRYMVV 274 >gi|227541875|ref|ZP_03971924.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182318|gb|EEI63290.1| possible dTDP-4-dehydrorhamnose reductase [Corynebacterium glucuronolyticum ATCC 51866] Length = 287 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 27/299 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVI------ 54 M+ V+G GQ+ ++ + + ++GR D+DL++ + D + Sbjct: 1 MEIAVLGEGGQLGTAIQ-LTNPGFTLRKLGRRDVDLVQLAAGDRAATRAAKDAVSGIGCV 59 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPID 113 +N AA T VDK E +PE A ++N G +A+ + I++STDYVF G R P+ Sbjct: 60 VNCAARTDVDKQETDPEGADAVNHRGVARLAELTRA---RFIHVSTDYVFGSGAPRRPLT 116 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 T+P +YG SKLAGE+++ + +I RTAW++S +F+ +MLRLA+ Sbjct: 117 PADATDPDTVYGASKLAGEKELIG-REDTLIARTAWLFSGDRLPSKKDFVSTMLRLARAG 175 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + VV DQ G+PT A +A L E + GI H G +W + A Sbjct: 176 KPARVVDDQAGSPTFAFD-------LATGLWEAVNLEATGIVHAVG-RGQATWYEVACAT 227 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + G V ++++P A RP++S LD S W+ GV + Sbjct: 228 YQAA---GADPDLVQPCTSEEFPQVARRPSWSVLDTSSWELAGFTPFPEWRSGVERAVT 283 >gi|323357015|ref|YP_004223411.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037] gi|323273386|dbj|BAJ73531.1| dTDP-4-dehydrorhamnose reductase [Microbacterium testaceum StLB037] Length = 469 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 28/295 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK-DFASFFLSFSPDVIINPAAY 60 K LV G +GQ+ ++L + + I R D+DL D A + + IIN AAY Sbjct: 191 KILVTGADGQLGRALRAEFGEHPWIEYASRADLDLTSSDLDAARRWRDYR--AIINAAAY 248 Query: 61 TAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 T VD AE A+ N A+++ A + G+ ++IS+DYVFDG P P Sbjct: 249 TKVDAAETAEGRVEAWKANVTAVAALSRVATAHGVTLVHISSDYVFDGTKDAPYTASDPL 308 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +Y ++K AG+ + S + I+RT+WV G NF+ SM+ LA+ + VV DQ Sbjct: 309 SPLGVYAQTKAAGD-AIVSVVPRHYIVRTSWVVGE-GKNFVRSMVDLAERGIDPRVVNDQ 366 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T A IA +I ++ + G+ ++T+ G P +W + A +F + G Sbjct: 367 IGRLTFASDIAASIRRLLESGAA------YGVHNVTSVGEPAAWHEVAREVFRLT---GH 417 Query: 239 PYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 +V + T +Y + RP S L+ S L T W+E + L Sbjct: 418 DPDRVVGVSTDEYHAASTARISPRPRNSVLETSILDVT-------WQERLAEYLA 465 >gi|284992709|ref|YP_003411263.1| dTDP-4-dehydrorhamnose reductase [Geodermatophilus obscurus DSM 43160] gi|284065954|gb|ADB76892.1| dTDP-4-dehydrorhamnose reductase [Geodermatophilus obscurus DSM 43160] Length = 298 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 136/295 (46%), Gaps = 20/295 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSF-------SPDV 53 LV G GQ+ L ++ + +GR ++DL + + P V Sbjct: 10 WLVTGARGQLGGDLLAVLAGRPGDPVTALGRAELDLTDERRVREVVRGWLDGVRGARP-V 68 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 ++N AAYTAVD AE + + A +N G +A+ G +++STDYVFDG + P Sbjct: 69 VLNAAAYTAVDAAETDEDTALLVNGRAPGWLAEELAGRG-RLVHVSTDYVFDGEADQPYP 127 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 +P P + YG++K AGE VA+ + ++RTAWVY G NF+ +M A + +S Sbjct: 128 VDAPVAPRSAYGRTKAAGERAVAAAGGDATVVRTAWVYGRHGGNFVRTMAGRALDGAPVS 187 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 VV DQ G+PT A +A ++ + + + H T D G VSW A ++ E Sbjct: 188 VVDDQVGSPTWAADLAAGLVALGAR-----PEPVPPVLHRT-DAGAVSWYGLARAVYEE- 240 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G + V T +P A RPA+S LD S W+ + L Sbjct: 241 --VGADPALVAPTTTAAFPRPAPRPAWSVLDGSAWLAAGLPAPQPWRTALHLALQ 293 >gi|313117361|ref|YP_004044344.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM 11551] gi|312294252|gb|ADQ68683.1| dTDP-4-dehydrorhamnose reductase [Halogeometricum borinquense DSM 11551] Length = 301 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 118/294 (40%), Gaps = 27/294 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD----------IDLLKPKDFASFFLSF 49 M+ L++G NG + ++ + + + ID+ Sbjct: 1 MQLLILGANGLLGSNVVTAAQDRGWRTTGTYHSERPTFDIPLHQIDITNTDAVQRVLSEV 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD ++N AA T VD E+ E A +NA G IA I +++STDYVFDG Sbjct: 61 EPDWVVNCAAMTDVDGCEENTEHAHEVNARAPGEIASQCVESSIRFLHVSTDYVFDGTVN 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-----SNFLLSMLR 164 +E P+ YGKSK AGE +V + +I R ++VY + + F + Sbjct: 121 GVYEEDDAPQPIQEYGKSKFAGENEVVERDPDALITRLSFVYGMHRGSDQLTGFPAWVRG 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + + DQ TPT A Q A I + D G+FH+ A + + Sbjct: 181 RLLDGEQTPLFTDQHVTPTRAGQAAETICDLI-------DADESGLFHVAAQS-CTTPYE 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 F I + + G + + + A RP+ +CL+ SK+ T T Sbjct: 233 FGAAI---AGQLGMDETLLTQGSQSDVNRPAERPSRTCLNVSKVEETLGRAQPT 283 >gi|3399703|dbj|BAA32088.1| dTDP-4-keto-L-rhamonose reductase [Streptococcus mutans] Length = 219 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 17/228 (7%) Query: 66 AEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNPLN 122 AEDE E+ ++IN G IAKA + +YISTDYVFDG + +P Sbjct: 1 AEDEGKELDYAINVTGTENIAKACEKYNATLVYISTDYVFDGEKPVGQEWEVDDKPDPKT 60 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 YG++K GEE V Y N+ I+RTAWV+ +G NF+ +M LAK ++VV DQ G P Sbjct: 61 EYGRTKRLGEEAVEKYVKNFYIIRTAWVFGNYGKNFVFTMQHLAKSHNSLTVVNDQHGRP 120 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYS 241 T +A + +A N E G +H++ D +W DFA I ++ Sbjct: 121 TWTRTLAEFMTYLAENQKE------YGYYHLSNDATEDTTWYDFALEILKDTDVV----- 169 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V + + Q+P KA RP S + +K T I TW+E ++ Sbjct: 170 -VKPVDSSQFPAKAKRPLNSTMSLTKAKAT-GFVIPTWQEALQEFYKQ 215 >gi|255533298|ref|YP_003093670.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] gi|255346282|gb|ACU05608.1| dTDP-4-dehydrorhamnose reductase [Pedobacter heparinus DSM 2366] Length = 303 Score = 221 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 34/305 (11%) Query: 1 MK-CLVIGNNGQIAQSLSSMC-----------VQDVEIIRVG----RPDIDLLKPKDFAS 44 M+ LV G+NG + Q ++ + V ++D+L P++ + Sbjct: 1 MRTVLVTGSNGLLGQKITERLLVTNQFGLIATAKGGNRFPVTEGYTYAEMDILDPENVKA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + PD II+ AA T VD E E E+A+ +N E + + I +++STD++F Sbjct: 61 VVEKYQPDAIIHTAAMTNVDTCEAEKELAYQLNVEAVKTLVSLCELHNIQLVHLSTDFIF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG + P DE + NPL+ YG +KL EE + S T + ILRT VY I +++ Sbjct: 121 DG-AHGPYDELAAPNPLSYYGITKLEAEEVIKSSTCRWAILRTIIVYGIVSDMSRTNIVL 179 Query: 165 LAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA-DGGP 219 AK + I+VV DQ+ PT A +A + + RG+++ + D Sbjct: 180 WAKTALEKGSPINVVNDQWRMPTLAEDLADCCLLAV-------EKDARGVYNASGKDMMR 232 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 +S E + + G S + I ++ A RP + K N ++ Sbjct: 233 IS-----ELVARVADYWGLNKSLITEISSESLNQAAKRPVKTGFILDKTINDLGYSPHSF 287 Query: 280 KEGVR 284 +EG+ Sbjct: 288 EEGLA 292 >gi|325105059|ref|YP_004274713.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145] gi|324973907|gb|ADY52891.1| dTDP-4-dehydrorhamnose reductase [Pedobacter saltans DSM 12145] Length = 302 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 31/308 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-------------PDIDLLKPKDFASFF 46 K LV G+NG + Q L+ +++ E+I G+ ++D++ + A Sbjct: 3 KILVTGSNGLLGQKLTDAVLKNKQFELIATGKGTNRHPVKEGYIYEEMDIIDKESIAFIV 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PD IIN AA T VD E + E + +N + I I++STD++FDG Sbjct: 63 NKHQPDAIINTAAMTNVDTCETQREECWLLNVTAVEYLIDICRENSIQLIHLSTDFIFDG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P E NPL+ YG+SKLA E+ + +Y ILRT VY I +++ A Sbjct: 123 -EDGPYTEEGQPNPLSYYGESKLAAEQLLEKSGIHYAILRTIIVYGIVNDMSRSNIILWA 181 Query: 167 K----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 K + I+VV DQ+ PT A +A + + +G+++ + +S Sbjct: 182 KGALEKGNPINVVNDQWRMPTLAEDLADICLLAV-------EKEAQGVYNASGKD-LMSI 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + E + + G S + I + A RP + K +++EG Sbjct: 234 IELVERV---ADYYGLDKSLIKPISSTTLNQAAKRPKRTGFILDKSIRELGYNPHSFEEG 290 Query: 283 VRNILVNI 290 +R + + Sbjct: 291 IRIMEKQL 298 >gi|117921234|ref|YP_870426.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117613566|gb|ABK49020.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 364 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 64/348 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--------VEIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 L+ G + Q++++L + + + + +D+ + A+ F PD + Sbjct: 14 VLLTGADSQLSKALVRVLARAAYRFDGRAFRVHALSHAQLDIGGKQSVAAVFAHVKPDWV 73 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS------ 108 IN AAY AVD+AE + A+ +N+ G +A G ++IS+DYVF G Sbjct: 74 INCAAYNAVDRAETAVDEAYRVNSLGPELLASECALTGARLVHISSDYVFSGEPAEVAEL 133 Query: 109 -----------------------RTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVI 144 + E + PL++YGKSKLAGE+ V ++ Sbjct: 134 ALNQNSLTDSSLSNSGLTESGLIERGLTESATPAPLSVYGKSKLAGEQAVLRILAERGMV 193 Query: 145 LRTAWVYSIFGSNFLLSMLRLAK---ERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +RTAW+Y + G NF+ +MLRL +R+ +SV+ DQ G+PT A +A I Q+ + + Sbjct: 194 IRTAWLYGVDGHNFVKTMLRLMATMPDRQPLSVINDQIGSPTWADALAHLIWQLIASPLN 253 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK--VYRIFTKQYPTK----- 254 S +FH G SW +FA I ++ + I + Y K Sbjct: 254 ASGEPR--LFHYAGH-GQCSWYEFALEIQRQALALKLLDKALPISAIDSLSYAAKALEKG 310 Query: 255 ---AHRPAYSCLDCSKLANTH---NIRI-------STWKEGVRNILVN 289 A RP+YS L+ ++ N+ + W+ ++ +L + Sbjct: 311 NKLAPRPSYSALNSDRVRQYLTRENLALTHSPELWRDWRWQLKAMLED 358 >gi|327404132|ref|YP_004344970.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823] gi|327319640|gb|AEA44132.1| dTDP-4-dehydrorhamnose reductase [Fluviicola taffensis DSM 16823] Length = 301 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 83/310 (26%), Positives = 133/310 (42%), Gaps = 33/310 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVGRP-------------DIDLLKPKDFASFF 46 MK L+ G+NG + Q + C++ I + ++DL+ ++ + Sbjct: 1 MKILITGSNGLLGQKIVKRCLKHHISFIATSKGVNRNPECPSENYIELDLVNSEEVEALI 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P II+ AA T VD E PE + +N + + +AA + +STD+VFDG Sbjct: 61 KAQKPTAIIHTAALTNVDYCELHPEECYFVNVRASNVLFEAAKKVKAHFQLLSTDFVFDG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVY----SIFGSNFLLS 161 P E NPL+IY +SK+ EE + N+ I RT VY + SN +L Sbjct: 121 -ENGPYKEDDTVNPLSIYAQSKVDAEELLLNDSDTNWSIARTIIVYGTGFGLSRSNMILW 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L + + +V DQF PT A +A ++I + RGIFH++ GPV+ Sbjct: 180 ALEALPKGEVMKLVDDQFRAPTWADDLAYGCVEIIKR-------NERGIFHLS---GPVT 229 Query: 222 WADFAEYIFWE-SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + + I E + I + A RP + D SK A + + Sbjct: 230 RS--VKAIVEEVGKALELENIAIETISSTTLNQAAKRPPRTGFDLSKAAQKLDYLPLDIQ 287 Query: 281 EGVRNILVNI 290 E + +L +I Sbjct: 288 ESIPLLLRDI 297 >gi|167622550|ref|YP_001672844.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] gi|167352572|gb|ABZ75185.1| dTDP-4-dehydrorhamnose reductase [Shewanella halifaxensis HAW-EB4] Length = 311 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 23/301 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGR-------PDIDLLKPKDFASFFLSFSPD 52 K +V G +G + ++L Q+ + II G +DL + +SF PD Sbjct: 6 KIMVTGASGLLGRALIKQLGQNSQQQIIACGYSRFGPNIERLDLTQAAQVSSFVAKHKPD 65 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I++ AA D +E +P+ A ++N+E + +AA G +YISTDYVFDG S++P Sbjct: 66 IILHCAAERRPDVSEQDPQAALALNSEATQFLTQAASQHGAWLLYISTDYVFDG-SQSPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK---ER 169 E + TNP+N YG+SKL GE V+ + ILR +Y S +++ L + Sbjct: 125 REDAETNPVNFYGQSKLKGELVVSDAQQGFAILRLPILYGEVESLNESAVMVLLNHLVDT 184 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E S+ +PTS +A AI ++ ++ + L G +H +A + + + Sbjct: 185 AEQSIDNWAIRSPTSTADVAAAITKMIA--LKQAGEPLAGHYHFSAKETMTKY----QML 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G + + + PT A RP S L C +L + ++ G + L Sbjct: 239 LVMGELLGLATGHLIPVTS---PTDSAKRPKDSTLSCERLVSLEIESKVPFRIGFKRALQ 295 Query: 289 N 289 + Sbjct: 296 D 296 >gi|224284002|ref|ZP_03647324.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Bifidobacterium bifidum NCIMB 41171] gi|313141153|ref|ZP_07803346.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB 41171] gi|313133663|gb|EFR51280.1| dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum NCIMB 41171] Length = 482 Score = 220 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ ++ + +E D P + F S IIN A Sbjct: 189 RTMVTGCNGQLGHAIRDYVEEHGLEGFEFNDIDTFDFSDPAQYDRFDWSL-YGTIINAGA 247 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVD+AE PE +A+ NA+G +A+ A I +++S+DYVFDG + DE Sbjct: 248 YTAVDRAET-PEGRPVAWKANAQGPALLARVAHEHNITLVHVSSDYVFDGTAEE-HDEEE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKER---R 170 PL +YG++K AG+ VA+ + ILR++WV F + R+A R Sbjct: 306 AFAPLGVYGQTKAAGDIAVANA-PRHYILRSSWVIGEGRNFVKTMMALSDRVADARDGLD 364 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E++VV DQ+G T +A AI + + + G + +T G SWAD A +F Sbjct: 365 EVTVVDDQYGRLTFTRDMAEAIFHLLDS------GAPFGTYDLTGSGAVRSWADIARKVF 418 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++ G +V I T +Y A RP +S L +K+ N W+E ++ Sbjct: 419 DQANGNG---DRVRPISTAEYFANAKAPVSPRPTHSALSLAKIENA-GYHAPDWEETLKT 474 Query: 286 ILVN 289 + Sbjct: 475 YVAK 478 >gi|312133747|ref|YP_004001086.1| rfbc [Bifidobacterium longum subsp. longum BBMN68] gi|311773025|gb|ADQ02513.1| RfbC [Bifidobacterium longum subsp. longum BBMN68] Length = 475 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 86/298 (28%), Positives = 124/298 (41%), Gaps = 27/298 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G G++ +++ +Q E D+ + IIN Sbjct: 191 RTMVFGCKGKLGRAIRRYADEHQLQGFEYHDTD--TFDIADSHAYEGIDWDL-YGTIINA 247 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AAYTAVDKAE PE A+ N +G G +A+ I I+IS+DYVFDG E Sbjct: 248 AAYTAVDKAET-PEGRKAAWQTNVKGVGNLARVCTEHRITLIHISSDYVFDGSQEL-HKE 305 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 PL +YG++K AG+ V + +LR++WV G NF+ M+ LA Sbjct: 306 DEEFAPLGVYGQTKAAGDTLV-ENVPQHYLLRSSWVIGE-GRNFVTRMIGLANNGEHAEA 363 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG T +A AI + + G ++MT G VSW D A +F Sbjct: 364 PSDQFGRLTFTDDMAGAIFHLLDSGAA------FGTYNMTGSGRVVSWYDIASIVFK--- 414 Query: 235 ERGGPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + +Y A RP LD SKL W+E + + L Sbjct: 415 AVGADENNLVANSVAEYAREHHAALRPRNCSLDLSKLEAA-GYHPRNWEESLASYLTK 471 >gi|145294461|ref|YP_001137282.1| hypothetical protein cgR_0416 [Corynebacterium glutamicum R] gi|140844381|dbj|BAF53380.1| hypothetical protein [Corynebacterium glutamicum R] Length = 450 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 25/291 (8%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV+G GQ+ +L + + V R ++D+ A + +S IIN AAYTA Sbjct: 182 VLVVGAGGQLGTALRAQFP---DAEFVTREELDITSDLTGARAWKQYS--TIINAAAYTA 236 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 VD+AE + A++INA +A A + +++S+DYVFDG + + DE +P +PL Sbjct: 237 VDQAEHDRAAAWAINATAVANLATIARENNLTLVHVSSDYVFDGAAES-YDENAPFSPLG 295 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTP 182 +YG+SK AG+ A+ + I+RT+WV G+NF+ +M L + SVV DQ G Sbjct: 296 VYGQSKAAGDIA-AATAPRHYIVRTSWVIGD-GNNFVRTMKSLDERGIAPSVVDDQIGRL 353 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T IA I + G +++T G P SWAD A +F SK Sbjct: 354 TFTEDIAAGIAHLLEVGAA------YGTYNLTNTGEPASWADVARAVFS-------DPSK 400 Query: 243 VYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +Y A RP S L+ K+ T TW+ + N L + Sbjct: 401 VTGVSTAEYFADKDAAPRPLRSVLNLGKIEAT-GFSAPTWQTRLNNYLKEL 450 >gi|310286574|ref|YP_003937832.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum S17] gi|309250510|gb|ADO52258.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Bifidobacterium bifidum S17] Length = 482 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRV-GRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + +V G NGQ+ ++ + E D P + F S IIN A Sbjct: 189 RTMVTGCNGQLGHAIRDYVEEHGLEGFEFNDIDTFDFSDPAQYDRFDWSL-YGTIINAGA 247 Query: 60 YTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 YTAVD+AE PE +A+ NA+G +A+ A I +++S+DYVFDG + DE Sbjct: 248 YTAVDRAET-PEGRPVAWKANAQGPALLARVAREHNITLVHVSSDYVFDGTAEE-HDEEE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKER---R 170 PL +YG++K AG+ VA+ + ILR++WV F + R+A R Sbjct: 306 AFAPLGVYGQTKAAGDIAVANA-PRHYILRSSWVIGEGRNFVKTMMALSDRVADARDGLD 364 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 E++VV DQ+G T +A AI + + + G + +T G SW D A +F Sbjct: 365 EVTVVDDQYGRLTFTRDMAEAIFHLLDS------GAPFGTYDLTGSGAVRSWVDIARKVF 418 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGVRN 285 ++ G +V I T +Y A RP +S L +K+ N W+E ++ Sbjct: 419 DQANGNG---DRVRPISTAEYFANAKAPVSPRPTHSALSLAKIENA-GYHAPDWEETLKT 474 Query: 286 ILVN 289 + Sbjct: 475 YVAK 478 >gi|197120379|ref|YP_002140806.1| bifunctional glycoside hydrolase/dTDP-4-dehydrorhamnose reductase [Geobacter bemidjiensis Bem] gi|197089739|gb|ACH41010.1| glycoside hydrolase and dTDP-4-dehydrorhamnose reductase, putative [Geobacter bemidjiensis Bem] Length = 730 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 18/287 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + L++G G + QS S +C + + + R +ID+ A+ F + P ++N A + Sbjct: 450 RILIVGKTGTLGQSFSRLCRHRGIPCHLLSRGEIDIASAASVATAFDRYEPWAVVNGAGF 509 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +D AE + F N G +A G+P + S+D VF+G RT E P +P Sbjct: 510 VRIDDAEGDASTCFRENTVGPAVLAAECARRGVPLMTFSSDMVFNGSKRTAYQERDPVSP 569 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQF 179 +NIYG+SK E +V ++LRT+ + + NF+ LR + D Sbjct: 570 INIYGQSKAEAERQVLKLYPGALVLRTSAFFGPWDRYNFVTVTLRRLAAGETVEAASDLV 629 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +PT + A + + + GI+H++ + G VSWA+ A + G Sbjct: 630 VSPTYIPDLVHAGLDLLLD-------GESGIWHLS-NAGAVSWAELAR---CCAKMAGLD 678 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 S+V A RP +S L + + + + + Sbjct: 679 SSRVIPRPAASLGYLAPRPPFSVLGSER-----GVVLPELENALSRY 720 >gi|169823956|ref|YP_001691567.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328] gi|167830761|dbj|BAG07677.1| dTDP-4-dehydrorhamnose reductase [Finegoldia magna ATCC 29328] Length = 281 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 148/289 (51%), Gaps = 16/289 (5%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + + G +G+I + L + E++ + +D++ + + F P++IIN +A Sbjct: 5 RIWISGADGKIGKVLQKYLDPFEDEVLATDKYIVDIVNSDETSIFARRNRPNIIINCSAL 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ P+ AF +NA GA +A AA+++ I++S D VF G SR+ E+ +P Sbjct: 65 TDPVLCQENPDEAFRVNALGARNMAVAANTVDAKIIHMSADDVFSGQSRSAYREYDTPHP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSKL GE V ++ + ILRT+W++S ++ + +++ A + ++ V Q+ Sbjct: 125 TTMYGKSKLMGENFVREFSVKHFILRTSWLFSP-VNHRVEDIIKEAIQTGKVYVPKAQYS 183 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTSA Q+A I+++ T GI+H + + G S +FAE I + G Sbjct: 184 SPTSAYQLAEFIVKLMA-------TYDYGIYHASCE-GVASRKEFAEEIL----KIKGID 231 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++V I + + HRP ++ L+ L + + + W+ ++ + Sbjct: 232 AEV--IEDENLRIEGHRPDFTALENFLLNTSQIYKFTDWQTSLQKYIEK 278 >gi|311741017|ref|ZP_07714842.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035] gi|311303819|gb|EFQ79897.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium pseudogenitalium ATCC 33035] Length = 451 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 85/283 (30%), Positives = 141/283 (49%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ ++L + D E+ D D+ P + +S IIN AAY Sbjct: 176 RILVTGANGQLGRALKRLLA-DAEL--CTHADFDITDPP--ERNWKQYS--AIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE++ A+++NAE +A+ A + +++S+DY+FDG + E +PL Sbjct: 229 DVNGAENDRAAAWAVNAEAPARLARIAAENQLTLVHVSSDYIFDGTNEV-HTEEELPSPL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AG+ + +YVI RT+WV+ G NF+ +M RLA + E V+ DQ G Sbjct: 288 SAYGASKAAGDTAAQTAPQHYVI-RTSWVFGD-GENFMSTMRRLANKGVEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I+ + + + G+++++ G V + A +F G + Sbjct: 346 PTFAEDLAKGIVHLL------NSDADYGVYNLSNSGDTVGRDEIAMAVF---IGLGHDPA 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T + W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFKPQNWR 438 >gi|227546956|ref|ZP_03977005.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212557|gb|EEI80445.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 476 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 31/300 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---I 54 + +V G+NG++ +++ + E D+ K +A+ + D+ I Sbjct: 191 RTMVFGSNGKLGRAIRRYAESHGLHGFEYHDTD--TFDIADAKAYAA----INWDLYGTI 244 Query: 55 INPAAYTAVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 IN AA+TAVD+AE + A+ N +G +A+ A I ++IS+DYVFDG Sbjct: 245 INAAAFTAVDEAETPGGRKNAWRTNVQGVKNLARIATEHRITLVHISSDYVFDGTKEL-H 303 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E PL +YG++K AG+ V + +LR++WV G NF+ ML LA+ Sbjct: 304 TEDEEFAPLGVYGQTKAAGDALV-ENVPQHYLLRSSWVIGE-GRNFVTRMLGLAQNHAHA 361 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 DQFG T +A AI + + G ++MT G SW D A +F Sbjct: 362 EAPSDQFGRLTFTDDMANAIFHLLD------GGASYGTYNMTGSGRIASWYDIARLVFQT 415 Query: 233 SAERGGPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + +Y A RP LD SKL T W++ + L Sbjct: 416 A---GVDPDTITANSVAEYAREHHAAMRPQNCSLDLSKLEAT-GYHPQDWEQSLTTYLAK 471 >gi|300772034|ref|ZP_07081904.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] gi|300760337|gb|EFK57163.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33861] Length = 308 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 31/301 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFFL 47 L+ G NG + Q L+ + D ++I + + +D+L + + Sbjct: 6 VLITGANGFLGQKLTDLLSADSRYKVIATSKGENRNPNKADYTFRQLDILDTEALDNILQ 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P II+ AA T+V+ E++PE+ +N + + + A +++STD+VFDG Sbjct: 66 HYKPASIIHTAALTSVEACEEQPELCQRLNIDVVAQLGRYAALNNSYIVHLSTDFVFDG- 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PTNPL+ YG+SK+ E +A Y +LRT VY I +++ AK Sbjct: 125 KNGPYKEDDPTNPLSAYGRSKVNSESALALTQCKYAVLRTILVYGIIADEKRSNLVLWAK 184 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 ++ I VV DQ+ PT +ARA + GIFH++ + Sbjct: 185 DKLSKQEAIKVVNDQWRMPTFVDDLARACKSAI-------EKQPTGIFHISGEEMMS--- 234 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE ++ + + + I +RP + D SK + R + ++E + Sbjct: 235 -IAEAVYTIADFWNFDRTYISEISAATIGQTDNRPRKTGFDLSKAKRLLDYRPTPFRESL 293 Query: 284 R 284 Sbjct: 294 H 294 >gi|300865161|ref|ZP_07109985.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] gi|300336851|emb|CBN55135.1| putative dTDP-4-dehydrorhamnose reductase [Oscillatoria sp. PCC 6506] Length = 287 Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 22/293 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 MK LVIG +G + L C + + G + + S P+ Sbjct: 1 MKVLVIGGSGLVGSHLLQTCHQRGWNVTGTYQNFAQPGLIPLQITNAAAVRSLITESQPE 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+ PA + VD E PE + IN G +A A + ++ S+DYVF+G P Sbjct: 61 VVFLPAFRSNVDYCEQNPEETYQINVVGCLNVAHATRDVRAKLVFYSSDYVFNG-KNGPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--SNFLLSMLRLAKERR 170 E +P+ +YG KL EEK++ ++Y+I R AWVY NF+L ++ + + Sbjct: 120 QEIDKPDPICVYGLQKLEVEEKISELLDDYLICRIAWVYGQEKQGKNFVLRLISMLTNNQ 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 I V DQ G+PT A I A ++ + +G+FH+T ++ FA I Sbjct: 180 AIRVPQDQVGSPTLADDIGEASCRLV-------EVGAKGLFHITG-IDCMNRYQFALKI- 230 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + G + + T + A RP + C +L N + EG+ Sbjct: 231 --AEVFGLQTDTLLPVMTSELNQAAARPLKCGMRCDRLVQNLNWNLRGVLEGL 281 >gi|333031141|ref|ZP_08459202.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] gi|332741738|gb|EGJ72220.1| dTDP-4-dehydrorhamnose reductase [Bacteroides coprosuis DSM 18011] Length = 299 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 31/292 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVG------------RPDIDLLKPKDFASFFL 47 + L+ G NG + L +Q E+ +DL + + ++ Sbjct: 6 RILITGANGFTGRYLLQYFMQQKTYELFATSNSTDKYPTQGYEYQRLDLTESGNVIAYIQ 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVII+ AA + + + E+ P A+S+N E I A + I I +STD+VFDG Sbjct: 66 KIQPDVIIHTAAISGIPQCEENPSQAYSVNVEAVKTIGTVAKKLAIHFIQLSTDFVFDGK 125 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E P+N YGK+KL E+ + + +Y I R A VY +++ + + Sbjct: 126 REIPYTEEDIPAPINEYGKTKLEAEQWIQKHLTHYAIARVAVVYGKPKDGQHTNIVEIIQ 185 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + E+ +V DQ+ TPT I + I + + +GIFH+ S Sbjct: 186 SKLSNNEELHLVSDQWRTPTYVGDICQGIHLLI-------EKEEKGIFHICGSE-LFSIY 237 Query: 224 DFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 + YI + G ++ I + RP ++ L +K + Sbjct: 238 ELGLYI---AKLLGKDSCLIHPEISNSAFNAI-PRPPFTALSNAKAKDILGY 285 >gi|225010350|ref|ZP_03700822.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] gi|225005829|gb|EEG43779.1| dTDP-4-dehydrorhamnose reductase [Flavobacteria bacterium MS024-3C] Length = 314 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 106/314 (33%), Positives = 156/314 (49%), Gaps = 44/314 (14%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-------RVGRPDIDLLKPKDFASFF----LSFSP 51 LV G +GQ+ QSL + + + + R +DL + + +S +P Sbjct: 10 VLVSGASGQVGQSLRHVLDTEETPLFSKNSWGFLDRSSLDLSQSDNLSSVIEGLLDKHAP 69 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSR 109 ++ AA+TAVD AE + E AF+IN +A A I +Y+STD+VF G + Sbjct: 70 KAFVHAAAFTAVDAAETQKEAAFTINETATRILAAACAKRNILFVYLSTDFVFAGKSTDQ 129 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 P P +P+ +Y +SK AGE+ V + + I+RT+WV+S FG+NF+ +MLRLAKER Sbjct: 130 KPFLPSDPIHPIGVYAQSKAAGEKAVQLHGGPHYIVRTSWVFSPFGNNFVKTMLRLAKER 189 Query: 170 ----------------REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 ISVV DQFG PTSAL +ARA++ + + GI H Sbjct: 190 LQFLSEPNQQTSARVKPTISVVSDQFGCPTSALDLARALLALITV-----QSLPYGILHF 244 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 + + GPV WA A +F +S V I ++ + A RPAYS L NT + Sbjct: 245 S-NAGPVHWAQLAGAVFEQS----NLPITVKPISSEDFAAAAPRPAYSVL-----ENTLD 294 Query: 274 IRISTWKEGVRNIL 287 + WKE + +L Sbjct: 295 PKARHWKEALAEVL 308 >gi|22255844|gb|AAM94769.1| CalS2 [Micromonospora echinospora] Length = 307 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 118/263 (44%), Gaps = 10/263 (3%) Query: 29 VGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA 88 + R +D+ DV++N AA+T VD AE + A +N G +A+A Sbjct: 35 LDRSALDITDAAAVRHAVPGH--DVVVNAAAWTDVDGAESDEAGATEVNGAGPANLARAC 92 Query: 89 DSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRT 147 G I++S+DYVF G + P E +P PLN YG+SKLAGE V ++RT Sbjct: 93 ARTGALLIHLSSDYVFSGETTVPWPEDAPPAPLNAYGRSKLAGERAVRGLLPAGGYVVRT 152 Query: 148 AWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 W+Y G NF+ ++LR A E + VV DQ G PT A A A +A + + + Sbjct: 153 GWLYGRHGPNFVRAVLRRAAETEFVDVVDDQHGQPTWAR--ALAGRLVALAGLAAAGRAP 210 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHRPAYSCLDCS 266 GI+H TA G +W FA +F A G +V + A RP S L Sbjct: 211 AGIYHGTA-AGRTTWYGFARTVF---ALHGLDPDRVRPTGSGTLAARPARRPRISVLGHD 266 Query: 267 KLANTHNIRISTWKEGVRNILVN 289 A + W+ + + Sbjct: 267 GWARAGLGPLPPWRRMIEAAVAE 289 >gi|295856706|gb|ADG46994.1| dTDP-4-dehydrorhamnose 3,5-epimerase [Bifidobacterium longum subsp. longum] Length = 483 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 142/304 (46%), Gaps = 34/304 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + D P + + S IIN Sbjct: 191 RTLVTGCNGQLGRAVRAYAEAHGLRGFEY--TDIDEFDFSDPTAYDKYDWSL-YGTIINA 247 Query: 58 AAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVDKAE A+ NA+G +A+ A I +++S+DYVFDG + E Sbjct: 248 GAYTAVDKAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTAGL-HSED 306 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-------KE 168 PL +YG++K AG+ VA+ + ILR++WV G NF+ +M+ L+ + Sbjct: 307 EAFAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGE-GRNFVKTMMMLSDRVANPDDQ 364 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +++VV DQ+G T +A AI + + + G +++T G +WA A Sbjct: 365 LEQVTVVDDQYGRLTFTKDMAEAIFHLLDSH------APYGTYNLTGSGAVRNWAQIASR 418 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F + G KV I T +Y A RP +S LD SK+ + W+E + Sbjct: 419 VFELTNGNG---EKVKPISTAEYFANAKAPVSPRPEHSALDLSKIKAA-GYTPADWEETL 474 Query: 284 RNIL 287 + Sbjct: 475 EAYV 478 >gi|119026526|ref|YP_910371.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] gi|118766110|dbj|BAF40289.1| possible fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Bifidobacterium adolescentis ATCC 15703] Length = 476 Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 27/298 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 K LV+G+ G++ +++ +++ E D+ + + IIN Sbjct: 192 KTLVLGSKGKLGRAIREYAESHSLENFEYH--DADTFDISDTASYENIDWDL-YGTIINA 248 Query: 58 AAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 AAYT+VD AE PE A++IN G +AK A I ++IS+DYVFDG + E Sbjct: 249 AAYTSVDGAET-PEGRKAAWTINVRGVRNLAKIATEHRITLVHISSDYVFDGTLQ-FHKE 306 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 PL++YG++K AG+ V + +Y+I R++W+ G NF+ ML LA+ Sbjct: 307 DENFAPLSVYGQTKAAGDALVENVPQHYLI-RSSWIIGE-GRNFVTRMLDLAQSGATAEA 364 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 DQFG T +A AI + + + G ++MT G VSW D A+ IF + Sbjct: 365 PNDQFGRLTFTDDMAGAIFHLL------NSNAPYGTYNMTGSGRVVSWFDLAQIIFAAA- 417 Query: 235 ERGGPYSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 SK+ ++Y A RP LD SK+ + + + W+ + + L Sbjct: 418 --NADNSKIIANSVEEYAKENNAALRPHNCSLDLSKIEDA-GYQPADWETSLHDYLAK 472 >gi|189465900|ref|ZP_03014685.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM 17393] gi|189434164|gb|EDV03149.1| hypothetical protein BACINT_02263 [Bacteroides intestinalis DSM 17393] Length = 301 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 30/304 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFF 46 K LVIG NG + + + ++ E I G DI D+ + + ++ F Sbjct: 6 KILVIGANGFTGRRILNDLSRNDEYIVTGCSLHDDIAPGSGNYRFISADICQMGEQSALF 65 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P+V+IN +A + D E E A SIN G +A ++ I++STD+VF+G Sbjct: 66 REVRPNVVINTSALSVPDYCEAHHEEADSINVNAVGQLAFRCEASAARLIHLSTDFVFNG 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + E +P+N YG +KL GE++ A +NY I R A VY ++L+L Sbjct: 126 DTTQLYTEVDTPDPVNYYGVTKLKGEKRAAELCSNYAIARVAVVYGAALPGQHGNVLQLV 185 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + EI VV DQ+ T T +++ I ++ + GIFH+ ++ Sbjct: 186 ADRLRNNEEIRVVSDQWRTATYVGDVSQGIEKLI-------NYPNNGIFHICGSE-CLTI 237 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 AD A ++ + YS + + TKQ RP +S L K + T +EG Sbjct: 238 ADIAYHV---ADILNLDYSLILPVTTKQMEEATPRPRFSGLSIEKARRELGYQPHTLEEG 294 Query: 283 VRNI 286 +R + Sbjct: 295 IRLM 298 >gi|284039662|ref|YP_003389592.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74] gi|283818955|gb|ADB40793.1| dTDP-4-dehydrorhamnose reductase [Spirosoma linguale DSM 74] Length = 299 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 32/307 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPD-------------IDLLKPKDFASFF 46 K L+ G NG + Q L + +VE+I R + +D+ + Sbjct: 3 KILLTGANGLLGQKLVGLLTKQPNVELIATARGENRLPFSDGYTYRAMDITDRQQVLDVI 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV+I+ AA T VDK E + + ++ N I +A + +++STD++FDG Sbjct: 63 GDVRPDVVIHGAAMTDVDKCEVQKDACWAQNVHAVEYIIEACRAANAFLVHVSTDFIFDG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSM 162 + P DE + NP++ YG SK AGE V + I RT VY I +L + Sbjct: 123 AA-GPYDEDAEANPISFYGWSKQAGESAVRHSDIRWAIARTVLVYGIAHDMSRSNIILWV 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + ++ + I VV DQ+ +PT A +A IA E GIF+++ ++ Sbjct: 182 KKSLEDGKNIKVVTDQWRSPTLAEDLAMGCFLIADQEAE-------GIFNISGKE-VLTP 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + A + G S + + + A RP + K ++ EG Sbjct: 234 YEMA---IQTADYFGLDKSLIAQADASTFTQVARRPPRTGFILDKARTVLGYEPHSFAEG 290 Query: 283 VRNILVN 289 + +L Sbjct: 291 IA-VLAE 296 >gi|322691989|ref|YP_004221559.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456845|dbj|BAJ67467.1| dTDP-4-dehydrorhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Bifidobacterium longum subsp. longum JCM 1217] Length = 484 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 34/304 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + D P + + S IIN Sbjct: 191 RTLVTGCNGQLGRAVRAYAEAHGLRGFEY--TDIDEFDFSDPTAYDKYDWSL-YGTIINA 247 Query: 58 AAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVD+AE A+ NA+G +A+ A I +++S+DYVFDG + E Sbjct: 248 GAYTAVDRAETAEGRPVAWKANAQGPALLARVAKDHHITLVHVSSDYVFDGTADL-HSED 306 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA-------KE 168 PL +YG++K AG+ VA+ + ILR++WV G NF+ +M+ L+ + Sbjct: 307 EAFAPLGVYGQTKAAGDIAVANA-PEHYILRSSWVIGE-GRNFVKTMMMLSDRVANPDDQ 364 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +++VV DQ+G T +A AI + + + G +++T G +WA A Sbjct: 365 LEQVTVVDDQYGRLTFTKDMAEAIFHLLDSH------APYGTYNLTGSGAVRNWAQIASR 418 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAH-----RPAYSCLDCSKLANTHNIRISTWKEGV 283 +F + G KV I T +Y A RP +S LD SK+ + W+E + Sbjct: 419 VFELTNGNG---EKVKPISTAEYFANAKAPVSPRPEHSALDLSKIKAA-GYTPADWEETL 474 Query: 284 RNIL 287 + Sbjct: 475 EAYV 478 >gi|167957286|ref|ZP_02544360.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [candidate division TM7 single-cell isolate TM7c] Length = 285 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 23/295 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +++G GQ+ ++L +M + + R ++D+ + + F DVIIN AA Sbjct: 4 KYVILGAGGQLGKALCAMFP---DAKALSREELDIADEEQVNA-FDWSKYDVIINAAALV 59 Query: 62 AVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 D +E + A + +NA G +AK A I+ S+DYV+DG + + Sbjct: 60 NADGSETDELRAKTWLVNAYGPRNLAKIAIEQNKTLIHYSSDYVWDGREKN-HQDDEVVA 118 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG+SK AG+ V S + I+R +WV + +M LA R VV DQF Sbjct: 119 PLLVYGESKAAGD-LVVSLAPKHYIMRVSWVVGDGHNM-PKTMKNLADMRINPKVVNDQF 176 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T A +IARA N + G++++T +G SW + A +F + G Sbjct: 177 GRLTFASEIARATKYFLDNNVA------YGLYNVTNEGPVKSWYEIAADVFEYA---GYD 227 Query: 240 YSKVYRIFTKQY----PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 ++V I T +Y P A RP S +D SKL T S + + +++ + + Sbjct: 228 RNRVQPISTDEYSADKPGFAPRPLNSDMDLSKLRQT-GFTSSDYTDLLKDYVNQL 281 >gi|220932571|ref|YP_002509479.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168] gi|219993881|gb|ACL70484.1| dTDP-4-dehydrorhamnose reductase [Halothermothrix orenii H 168] Length = 287 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 13/289 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK LV G+ + ++ +I +GR D+D+ + L PD++I+ A Sbjct: 1 MKVLVTGDK-KFCRTFVKKLGTRYRVIFLGRDDLDITNTLEVEKKILDVYPDIVIHCLAL 59 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E + +AF IN+ GA +A A+ +YIST +VF G P E P Sbjct: 60 DDIEACERDKAMAFQINSYGAQNVAIASSMCEAKLVYISTSHVFSGRLNRPYRESDELQP 119 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N+YG SKL E + + I+RT W+Y + + ++ +K+ + + + D++ Sbjct: 120 VNVYGLSKLLAENFIKEINRKFFIVRTGWLYGPGRDSLIGKLIETSKQEKTVELPGDRYD 179 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT +A I ++ T G +H+T + G S + + Sbjct: 180 TPTFIGDLAHIIGRLMT-------TDFYGTYHIT-NSGYCSLYSWGLEVV----RALKLN 227 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + P Y+ LD + +AN IR W++ + + LV+ Sbjct: 228 VNIKEVTLEHQSGLVRIPEYTVLDNNLVANKLGIRPRGWRKALNSYLVD 276 >gi|296118114|ref|ZP_06836696.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium ammoniagenes DSM 20306] gi|295969000|gb|EFG82243.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium ammoniagenes DSM 20306] Length = 468 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 38/299 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP----DVIINP 57 K LV G +GQ+ ++L ++ + R + D+ + P D IIN Sbjct: 176 KILVTGADGQLGRALRAVYKNAAHVEFTTRTEFDITAAD-----IATARPWRSYDAIINC 230 Query: 58 AAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 AAY V+ AE + A+ +NA +A A + +++S+DY+FDG E Sbjct: 231 AAYNDVNGAETDRADAWEVNATAPARLAAIAAENNLTFVHVSSDYIFDGTQEV-HTEAEL 289 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL+ YG SK AG+ + YVI RTAWV+ G+NF+ +M LA+ E V+ D Sbjct: 290 PSPLSAYGASKAAGDTAAQTAPRRYVI-RTAWVFGE-GNNFMSTMASLAQRNIEPLVIND 347 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G PT A +A+ I + + G++++T+ G V + A +F G Sbjct: 348 QIGRPTYAEDLAKGIKHLLDT------RADYGVYNLTSGGDAVGRDEIAMAVFIGM---G 398 Query: 238 GPYSKVYRIFTKQY-------------PTKAH---RPAYSCLDCSKLANTHNIRISTWK 280 ++V+ + T QY P A RPA S LD +K+ T + S W+ Sbjct: 399 HDPTEVHSVSTAQYNEHRVQQATENNQPAPAPEALRPAASTLDLTKIEAT-GFKPSNWR 456 >gi|302335388|ref|YP_003800595.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084] gi|301319228|gb|ADK67715.1| dTDP-4-dehydrorhamnose reductase [Olsenella uli DSM 7084] Length = 481 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 89/304 (29%), Positives = 132/304 (43%), Gaps = 34/304 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV---IINPA 58 + LV G NGQ+ ++ + +++ DID D S+ D +IN Sbjct: 189 RTLVTGCNGQLGRA-VRQLANERKLVGFDYCDIDTFDFSDIRSY-DDIPWDAYGAVINCG 246 Query: 59 AYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AYTAVD+AE PE + + NA G + + GI +++S++YVFDG DE Sbjct: 247 AYTAVDRAES-PEGRVMCWKANALGPSLLTQTCARHGITLVHVSSEYVFDGSREL-HDED 304 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-------AKE 168 PL++YG+SK AG+ S Y I+RT+WV + F+ +M RL A Sbjct: 305 ETYAPLSVYGQSKAAGDIA-LSCCPKYYIVRTSWVIGDGHN-FVKTMARLSDRCADPADS 362 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +SVV DQ G PT A ++AR I + GI++++ G SW D A Sbjct: 363 LDSVSVVNDQLGRPTFADELARGIFWLLDTRPA------YGIYNLSNAGRIASWYDIARR 416 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEGV 283 F R G V+ T Y A RP S L K+ W+ + Sbjct: 417 TFEM---RNGNGHCVHATSTADYYAGSEAPVACRPRNSALSLEKMCR-LGFEPRDWEGQL 472 Query: 284 RNIL 287 + + Sbjct: 473 SSYM 476 >gi|307592210|ref|YP_003899801.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306985855|gb|ADN17735.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 719 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 13/269 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +++G +G + ++ +C + V + R ++D+ P +IN A Y Sbjct: 444 LVIVGASGTLGKAFGRLCEIRGVAYRLLSRQEMDITDAVSIERVLAELKPWAVINAAGYV 503 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE EPE+ +NAEGA +A+ G + S+D VFDG P E PL Sbjct: 504 RVDDAEKEPEVCLKVNAEGAAILAEVCRRYGAKYLTFSSDLVFDGTGSNPYLEDDDIAPL 563 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK E++V + +++RT+ + + NF+ LR + D Sbjct: 564 NVYGRSKALAEKQVLAADETALVIRTSAFFGPWDEYNFVTIALRQLEAGESFVAASDVVI 623 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + +A + + + G++H+ A+ G +SWAD A Y + G Sbjct: 624 SPTYVPDLVQASLDLLVD-------DECGLWHL-ANKGAISWADLARY---AAQAAGVNT 672 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + + K+ A RP+YS L K Sbjct: 673 DNLISLPLKELGLIAARPSYSVLGSHKAE 701 >gi|227832078|ref|YP_002833785.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] gi|262184067|ref|ZP_06043488.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] gi|227453094|gb|ACP31847.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium aurimucosum ATCC 700975] Length = 454 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 23/285 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + LV G NGQ+ ++L + G D D+ P + +S IIN AA Sbjct: 175 RILVTGANGQLGRALKKFLPSAGLGAVEFCGHEDFDITNPPA--RPWKQYS--AIINCAA 230 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y V+ AED A+++NA +A+ A + +++S+DY+FDG E + Sbjct: 231 YNDVNGAEDNRAAAWAVNASAPAKLARIAAENNLTLVHVSSDYIFDGTEEV-HSEDELPS 289 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL+ YG SK AG+ + +YVI RT+WV+ + F+ +M LA + + SV+ DQ Sbjct: 290 PLSAYGASKAAGDTAAQTAPRHYVI-RTSWVFGDGAN-FMATMRSLANKGVKPSVIHDQR 347 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G PT A +A+ II + E G+++++ G V + A +F G Sbjct: 348 GRPTFAEDLAKGIIHLLKTEAE------YGVYNISNSGDVVGRDEIAMAVFTG---VGQD 398 Query: 240 YSKVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 + V + T+QY +A RP S D SK+ T + W+ Sbjct: 399 PADVTPVSTEQYREIAGPEAPRPKESTFDLSKIEAT-GFKPMNWR 442 >gi|255324210|ref|ZP_05365332.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose reductase [Corynebacterium tuberculostearicum SK141] gi|255298726|gb|EET78021.1| dtdp-4-dehydrorhamnose 3,5-epimerase, dtdp-dehydrorhamnose reductase [Corynebacterium tuberculostearicum SK141] Length = 451 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G NGQ+ ++L + + D D+ P + +S IIN AAY Sbjct: 176 RILVTGANGQLGRALKRLLT---DAEFCSHADFDITDPP--ERNWKQYS--AIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AE++ A+++NAE +A+ A I +++S+DY+FDG + E +PL Sbjct: 229 DVNGAENDRAAAWAVNAEAPARLARIAAENQITLVHVSSDYIFDGANEV-HTEEELPSPL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AG+ + +YVI RT+WV+ G NF+ +M RLA + E V+ DQ G Sbjct: 288 SAYGASKAAGDTAAQTAPQHYVI-RTSWVFGD-GENFMSTMRRLATQGVEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I+ + + + G+++++ G V + A +F G + Sbjct: 346 PTFAEDLAKGIVHLL------NSDADYGVYNLSNSGDTVGRDEIAMAVF---IGLGHDPA 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T + W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFKPQNWR 438 >gi|227502493|ref|ZP_03932542.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49725] gi|227076766|gb|EEI14729.1| dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49725] Length = 461 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + + D+ P + + + IIN AAY Sbjct: 176 KILVTGANGQLGRALKRVLK---NAEFCTHAEFDITNPPQ--RQWKQY--EAIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AED+ A+++NAE +A A + +++S+DY+FDG E +PL Sbjct: 229 DVNGAEDDRAAAWAVNAEAPAKLAHIAAENQLTFVHVSSDYIFDGSKEL-HTEDEIPSPL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AGE + +YV+ RT+WV+ + F+ +M RLA+ +E V+ DQ G Sbjct: 288 SAYGASKAAGETAAQTAPQHYVV-RTSWVFGDGPN-FIATMRRLAEADKEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I + E GI++++ G V + A +F G S Sbjct: 346 PTFAEDLAKGIAHLLRTRPE------YGIYNISNSGDTVGRDEMAMSVF---IGLGHDPS 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFSPQNWR 438 >gi|220907960|ref|YP_002483271.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] gi|219864571|gb|ACL44910.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7425] Length = 292 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 26/298 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----------DIDLLKPKDFASFFLSFS 50 K LV G +G + +L M D ++ G IDL + F L Sbjct: 4 KLLVTGASGFLGWNLCQMAQADWQVYGTGFAKNIQIPGVHFRHIDLRNFVELKQFLLDIQ 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + + P+ ++ IN +G +A + IP ++ STD VFDG + Sbjct: 64 PDGVIHTAAQSNPNYCQLNPQESYEINVRTSGDLASLCAEMDIPLVFTSTDLVFDG-QHS 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS--NFLLSMLRLAKE 168 P E P PL++YG+ K+A E + + V+ R ++ + S +F+ +++ + Sbjct: 123 PYRETDPVCPLSVYGEHKVAAERLIQNAHPGAVLARMPLMFGVAASAQSFIQPFVKILRS 182 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 +E+ + D+F TP SA AR ++ I +GI H+ +S F + Sbjct: 183 GQELKLFVDEFRTPVSAETAARGLLLILQK-------QFKGILHL-GGQERLSRYQFGQ- 233 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + P A RP CLD S LA + + +E + + Sbjct: 234 --QMVEVLQLDPTLLKPCHQADVPMAAPRPRDVCLDSS-LAYSLGYVTRSIREELERL 288 >gi|306835067|ref|ZP_07468110.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49726] gi|304569048|gb|EFM44570.1| dTDP-4-keto-6-deoxyglucose-3,5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [Corynebacterium accolens ATCC 49726] Length = 461 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 24/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + + D+ P + + + IIN AAY Sbjct: 176 KILVTGANGQLGRALKRVLK---NAEFCTHAEFDITNPPQ--RQWKQY--EAIINCAAYN 228 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 V+ AED+ A+++NAE +A A + +++S+DY+FDG E +PL Sbjct: 229 DVNGAEDDRAAAWAVNAEAPAKLAHIAAENQLTFVHVSSDYIFDGSKDL-HTEDEIPSPL 287 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + YG SK AGE + +YV+ RT+WV+ + F+ +M RLA+ +E V+ DQ G Sbjct: 288 SAYGASKAAGETAAQTAPQHYVV-RTSWVFGDGPN-FIATMRRLAEADKEPKVIHDQRGR 345 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT A +A+ I + E GI++++ G V + A +F G S Sbjct: 346 PTFAEDLAKGIAHLLRTQPE------YGIYNISNSGDTVGRDEMAMSVF---IGLGHDPS 396 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWK 280 +V + T+QY +A RP S L K+ T W+ Sbjct: 397 EVTPVSTEQYREIAGPEAPRPKESTLALDKIEAT-GFSPQNWR 438 >gi|15922287|ref|NP_377956.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7] gi|145579383|pdb|2GGS|A Chain A, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose Reductase From Sulfolobus Tokodaii gi|145579384|pdb|2GGS|B Chain B, Crystal Structure Of Hypothetical Dtdp-4-Dehydrorhamnose Reductase From Sulfolobus Tokodaii gi|15623076|dbj|BAB67065.1| 273aa long hypothetical dTDP-4-dehydrorhamnose reductase [Sulfolobus tokodaii str. 7] Length = 273 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 85/279 (30%), Positives = 128/279 (45%), Gaps = 27/279 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LS + + E+I+V G +DL F + PDV Sbjct: 1 MRTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDV 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VDK E E E A+ INAE I +A I ++ISTDYVFDG Sbjct: 61 IINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGN-YK 119 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG SKL GE + ++ +I+RT+ ++ F + + + KE + + Sbjct: 120 EEDIPNPINYYGLSKLLGE--TFALQDDSLIIRTSGIF--RNKGFPIYVYKTLKEGKTVF 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI+++ GI H+ G +S + A I Sbjct: 176 AFK-GYYSPISARKLASAILELLELRKT-------GIIHVA--GERISRFELALKI---- 221 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 E+ +V + + A RP S LD S+ Sbjct: 222 KEKFNLPGEVKEVD-EVRGWIAKRPYDSSLDSSRARKIL 259 >gi|326799699|ref|YP_004317518.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] gi|326550463|gb|ADZ78848.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium sp. 21] Length = 306 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 33/304 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRP-------------DIDLLKPKDFAS 44 + LV G+NG + Q ++ + +Q E I R D+D+ + A Sbjct: 3 RLLVTGSNGLLGQKITDILLQGQFPGFEYIASSRGSDRFGTSSRYRYLDLDITHHEQVAK 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 ++ PD+IIN AA VD E EPE ++ +N + + I I++STD+VF Sbjct: 63 AIETYRPDIIINTAAMPNVDACEREPEKSYEVNVVAVAHLIAVCERKNIHLIHLSTDFVF 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG P +E NP+N YGK KLA EE + T + I+RT VY + +++ Sbjct: 123 DG-EEGPYEEEDIPNPVNTYGKHKLAAEELIQKATCPWAIVRTILVYGVLRDMSRSNIVL 181 Query: 165 LAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 AK + I VV DQ+ PT A +A+A + IA G++H++ Sbjct: 182 WAKGALENGQSIRVVNDQWRMPTLAEDLAKACLTIAERKAT-------GMYHISGKD-MF 233 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S + E + +A S + + ++ A RP + K + ++ Sbjct: 234 SICEIVEAV---AAYYRLDASFICKEKSEVLKQDARRPKRTGFILDKAYERLDYVPHSFG 290 Query: 281 EGVR 284 EG++ Sbjct: 291 EGLK 294 >gi|212696874|ref|ZP_03305002.1| hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] gi|212676164|gb|EEB35771.1| hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] Length = 283 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 28/295 (9%) Query: 1 MKC---LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ + G +G++ +L + EII + ++D+ ++ F P +IIN Sbjct: 1 MRINTIWITGAHGRLGSTLVRYLDPLEAEIIATDKEEVDITNQEEVNLFVDRNRPKIIIN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 + T K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E Sbjct: 61 CSGITDRLKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEID 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 NP ++YGKSK EE V + + Y I+R + +YS + + + + I V Sbjct: 121 KANPNSVYGKSKFLAEEFVKDFADRYFIVRVSRLYSKENNLVESIIDQ--GKNGLIKVPK 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 ++G+PTSA ++++ +I I DT+ G++H + + G S+ FA+ I + Sbjct: 179 SRYGSPTSAYELSKFLISIM-------DTNAYGVYHASCE-GTCSFRAFAQKIVDLTK-- 228 Query: 237 GGPYSKVYRIFTKQYPTKAHR----PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +++ + R PA+ +D L STW++ +++ L Sbjct: 229 --LDARIEEVRDSD------RIDFEPAFRGIDNYYLDLLGKNTFSTWEDALKDYL 275 >gi|227536063|ref|ZP_03966112.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] gi|227243960|gb|EEI93975.1| dTDP-4-dehydrorhamnose reductase [Sphingobacterium spiritivorum ATCC 33300] Length = 308 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 131/301 (43%), Gaps = 31/301 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------------IDLLKPKDFASFFL 47 L+ G+NG + Q L+ + D E+I + + +D+L + + Sbjct: 6 VLITGSNGFLGQKLTDLLSADSRYEVIATSKGENRNPNQADYTFRQLDILDTESLNNILQ 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + P II+ AA T+V+ E++PE+ +N + + + A +++STD+VFDG Sbjct: 66 HYKPASIIHTAALTSVEACEEQPELCQRLNIDVVAQLGRYAALNNSYLVHLSTDFVFDG- 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E PTNPL+ YG+SK+ E +A Y +LRT VY I +++ AK Sbjct: 125 KNGPYKEDDPTNPLSAYGRSKVDSENALALTQCKYAVLRTILVYGIIADEKRSNLVLWAK 184 Query: 168 ER----REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 ++ I VV DQ+ PT +ARA + GIFH++ + Sbjct: 185 DKLSKQEAIKVVNDQWRMPTFVDDLARACKSAI-------EKQQTGIFHISGEEMMS--- 234 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 AE ++ + + + I +RP + D SK + + + +++ + Sbjct: 235 -IAEAVYTIADFWNFDRTYISEISAATIGQTENRPCKTGFDLSKAKRLLDYQPTPFRKSL 293 Query: 284 R 284 Sbjct: 294 H 294 >gi|257387274|ref|YP_003177047.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM 12286] gi|257169581|gb|ACV47340.1| dTDP-4-dehydrorhamnose reductase [Halomicrobium mukohataei DSM 12286] Length = 296 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 84/302 (27%), Positives = 128/302 (42%), Gaps = 27/302 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP----------DIDLLKPKDFASFFLSF 49 M+ LV+G NG + ++ Q ++ DL + F Sbjct: 1 MRLLVVGANGLLGSNVVLAGQQRGWDVCGTYHSTQPAFDIPLTQFDLGEHDTFDETLAEH 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PDV+IN AA T VD E PE A+ +N G +A D+ G+ I++STDYVFDG R Sbjct: 61 DPDVVINCAAMTDVDGCETNPEQAYVLNGNAPGELATDCDANGVDFIHVSTDYVFDGTQR 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSMLR 164 TP E + +P +YG+SKL GE+ V +I R ++V+ I S F + Sbjct: 121 TPYSESADPDPAQVYGQSKLVGEQAVHGEVPETLIARLSFVWGIHRSRGDLTGFPAWIRN 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + + DQ+ TPT A Q A ++ + G+FH+ VS + Sbjct: 181 RHQSDETVPLFTDQWVTPTRAGQAAETLLDLIGQ-------DATGLFHVACSS-CVSPYE 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 F E I + + + A RP YSCL+ + +T T +E V Sbjct: 233 FGEMI---AEYVNAGEDLLSEGSIEDVERDATRPTYSCLNVEHVESTLGRSQPTIREDVE 289 Query: 285 NI 286 + Sbjct: 290 AV 291 >gi|163748305|ref|ZP_02155587.1| dTDP-4-dehydrorhamnose reductase [Oceanibulbus indolifex HEL-45] gi|161378424|gb|EDQ02911.1| dTDP-4-dehydrorhamnose reductase [Oceanibulbus indolifex HEL-45] Length = 238 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 93/249 (37%), Positives = 133/249 (53%), Gaps = 11/249 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M LV G+ GQ+A +L + + R DL P+ A+ + P +IN AAY Sbjct: 1 MSLLVFGSTGQLAVALRK---HSDDARFLDRAAADLAHPEACAAVIRATRPSAVINAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 TAVD+AE+E +A INAE GA+A+A + IP +++STDYVF+G ++P P P Sbjct: 58 TAVDRAEEEEVLATRINAEAPGAMARACAELEIPFLHVSTDYVFNGSGQSPWRPDDPIAP 117 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG+SK AGE V + ++ ILRT+WV+S G NF+ +ML+L++ R + VV DQ G Sbjct: 118 INAYGRSKAAGEAAVRAAGGSHAILRTSWVFSAPGKNFVTTMLQLSEHRDALKVVDDQIG 177 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AL IA ++Q+A + G +H SW FA F + Sbjct: 178 GPTPALSIAETLLQMAGAMKAGQAG---GTYHYAG-APATSWTCFARETFTTADRA---- 229 Query: 241 SKVYRIFTK 249 V I T Sbjct: 230 VDVAGIPTS 238 >gi|323474311|gb|ADX84917.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus REY15A] Length = 274 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 24/293 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 M+ L+ G +GQ+ LS + D+ + + +DL F + PDVII Sbjct: 1 MRILITGASGQLGIELSEVLKGDLIKVYNTKEVQGGYKLDLTNYSAVEDFIIKKKPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N A+ T VDK E +AF +NAE I +A+ + I+ISTDYVFDG E Sbjct: 61 NTASLTDVDKCGIERGLAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDGEKGL-YKED 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP+N YG SKL GE SY ++ ++LRT+ V+ F + + + KE +E+S Sbjct: 120 DLPNPINYYGLSKLLGETYALSY-DDTLVLRTSGVF--RHKGFPIYVYKTLKEGKEVSAF 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 + +P SA ++A AI ++ D GI ++ G +S D A I E Sbjct: 177 K-GYYSPISARKLAEAISELI-------DYRKTGILNVA--GERISRVDLAMKI-KEKFN 225 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 GG +V + A RP S LD SK ++ + E +R ++V Sbjct: 226 LGGSVKEVDDVK----GWVAKRPFDSSLDISKAKKILSVDFYSLDENLRYMVV 274 >gi|297184077|gb|ADI20196.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 298 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 32/303 (10%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEIIRVGR-------------PDIDLLKPKDFASF 45 MK L G+NG + Q ++++ + R +D+ +D ++ Sbjct: 1 MKILFTGSNGLLGQKIAVATANYPQHSFLATSRGANRTKAMGTATYASMDITNAEDVSNV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 F PDVII+ AA T VD+ E +P+ A +N EG IA AA+ +G ++ISTD++FD Sbjct: 61 VGDFEPDVIIHGAAMTHVDECELQPDQATLLNVEGTRNIANAANEVGAHVVHISTDFIFD 120 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL 165 G P E + PL+ YG +KL E+ + ++ ILRT V + +++ Sbjct: 121 G-KDGPYKEDAKAQPLSHYGWTKLEAEDIIKDL-PSWSILRTVLVIGMAEDLSRSNIVLW 178 Query: 166 AK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 AK + + I+VV DQF TPT A +A + +D +G+F+++ +S Sbjct: 179 AKGALEKGQPINVVDDQFRTPTLAED-------LAQGALLAADQCAQGVFNISGPD-FMS 230 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 D + +A G V R + A RP + D SK T+ + Sbjct: 231 IYDL---VGQVAAYFGLSMESVTRTDSTTLNQPAKRPPRTGFDISKARKELGYEPHTFNQ 287 Query: 282 GVR 284 + Sbjct: 288 ALE 290 >gi|315445634|ref|YP_004078513.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|315263937|gb|ADU00679.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 451 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 19/272 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV+G +GQ+ ++L Q + R DIDL + S D IIN AAYT Sbjct: 192 RILVLGASGQLGRALRQEYAQASHVEFAARTDIDLT-TTNLDSARRWRDYDAIINAAAYT 250 Query: 62 AVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 VD +E A++ N G A+A+ A + G+ +++S+DYVFDG + P E P Sbjct: 251 GVDASETAAGRLAAWATNVTGVAALARVAAAHGVTLVHVSSDYVFDGTAGRPYREDDPVC 310 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AG+ V + + I+RT+WV G+NF+ +ML LA + SVV DQ+ Sbjct: 311 PLGVYGETKAAGDLIV-TTVPRHYIIRTSWVVGD-GNNFVQTMLSLAGRGIDPSVVADQY 368 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G T A +IARAI + G +++T G SWA+ +F + G Sbjct: 369 GRLTFASEIARAIRHCIET------NAPYGTYNVTCSGPISSWAEIGRQVFALA---GHN 419 Query: 240 YSKVYRIFTKQYPTK-----AHRPAYSCLDCS 266 +V R+ T +Y A RP S LD S Sbjct: 420 PDRVTRVSTAEYFADATRPIAPRPRNSVLDLS 451 >gi|237799717|ref|ZP_04588178.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022572|gb|EGI02629.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 207 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E++ + R + DL + P Sbjct: 2 MKILLLGKNGQVGWELQRSLAVLGEVVALDRHTVSTDYGDLSGDLSNLEGLRDTIRRVQP 61 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 VI+N AAYTAVDKAE E E+A ++NA + +A+ A ++ ++ STDYVFDG T Sbjct: 62 QVIVNAAAYTAVDKAETEQELAHTVNALASQVLAEEAHTLDALLVHYSTDYVFDGTGTTA 121 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + +N YG +KL GE + + ++I RT+WVY+ G+NF +MLRLAK+R Sbjct: 122 WKESDAVSAVNYYGATKLEGERLIVASGCKHLIFRTSWVYAARGNNFAKTMLRLAKDRPT 181 Query: 172 ISVVCDQFGTPTSALQIAR 190 ++V+ DQ G PT A +A Sbjct: 182 LNVIADQIGAPTGAELLAD 200 >gi|296192704|ref|XP_002744188.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 3 [Callithrix jacchus] gi|297295657|ref|XP_001089306.2| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2 [Macaca mulatta] Length = 307 Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 36/298 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + LDCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRP-----------------LDCSKLETLGIGQRTPFRIGIKESL 292 >gi|284997404|ref|YP_003419171.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] gi|284445299|gb|ADB86801.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.D.8.5] Length = 274 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 136/293 (46%), Gaps = 24/293 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 M+ L+IG +GQ+ LS + DV + + +DL F + PDVII Sbjct: 1 MRILLIGASGQLGLELSEVLKGDVIKVYNTKEVQGGYKLDLTNYLAVKDFIVKKKPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N A+ T VDK E E AF +NAE I +A+ + I+ISTDYVFDG E Sbjct: 61 NTASLTDVDKCETEKGEAFKVNAEAVKHIVRASRVVEAYLIHISTDYVFDGEKGL-YKEE 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP+N YG +KL GE SY ++ VI RT+ V+ F + + + KE +E+S Sbjct: 120 DLPNPINYYGLTKLLGETYALSYDDSLVI-RTSGVF--RHKGFPIYVYKTLKEGKEVSAF 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 + +P SA ++A AI ++ D GI ++ G VS D A I E Sbjct: 177 K-GYYSPISARKLAEAISELI-------DYRKTGILNVA--GERVSRVDLAIKI-KEKFN 225 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V + A RP S LD SK ++ + E +R +++ Sbjct: 226 LPGWVKEVDNV----MGWIAKRPFDSSLDISKAKRILSVDFYSLDENLRYMVI 274 >gi|303244870|ref|ZP_07331197.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis IH1] gi|302484747|gb|EFL47684.1| dTDP-4-dehydrorhamnose reductase [Methanothermococcus okinawensis IH1] Length = 304 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 82/310 (26%), Positives = 131/310 (42%), Gaps = 38/310 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD-----------------IDLLKPKDFA 43 K +IG G I L ++ + R D +D+ Sbjct: 4 KIAIIGL-GMIGYELVKKYNDLGFKVHIITRSDKGFFDKYNYINNINKHFVDITNENKIK 62 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 ++ +PD ++N AA T VD E E E+A+ NA + +A + IP +ISTDYV Sbjct: 63 ETIITINPDFVVNTAAITNVDLCETEREVAYKTNALAVKYVGEACKKLNIPLCHISTDYV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVY--SIFGSNFLL 160 FDG + E NP+N YG +K GE+ + ++ I+R + Y S NFL+ Sbjct: 123 FDG-EKGDYIENDRINPINYYGWTKAEGEKILNELNHDLTSIVRISVPYCISPIKVNFLM 181 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 +L KE +++ V DQ+ TPT ++ I++I + + G+ H G V Sbjct: 182 WVLNTLKEGNKVNAVIDQWNTPTYVPELMEGIVKI-------HEKEVNGLLHF-GGGEKV 233 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S +FA + + I + + KA+RPA + L K NI++ Sbjct: 234 SRYEFA---LKVAEIFDLNKDLIKPIPSSELGWKANRPADTSLISKKSEKLLNIKL---- 286 Query: 281 EGVRNILVNI 290 + V L I Sbjct: 287 KKVDECLKEI 296 >gi|329766671|ref|ZP_08258214.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136926|gb|EGG41219.1| dTDP-4-dehydrorhamnose reductase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 311 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 133/313 (42%), Gaps = 40/313 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR-----------VGRPDIDLLKPKDFASFFLSFS 50 K VIG +G + + C D E+ V +D+ P D Sbjct: 4 KICVIGASGLLGYKIIHSC-NDYEVFGTYNQTQINHDHVHLIQLDITSPADCEKII-EIQ 61 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD I+N AA T VD E E A +N G I K A + ++ISTD +F G Sbjct: 62 PDYIVNTAAITNVDYCEKYKEKAHLVNVIGTQNIVKIAKKLNCKLVHISTDGIFSGN-DL 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-------------N 157 E P NP+N YG++KL E V + ++Y+ILRT +Y N Sbjct: 121 NYKEDDPPNPVNYYGQTKLESENAVKTL-DDYLILRTNVLYGYVSKNIIKSRSNYLKPIN 179 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 F L +L + ++I +V DQF PT A +A+ I+ + G FH + D Sbjct: 180 FGLWILSELHKNKKIRIVNDQFSNPTLADNLAKIIMDCIKINL-------IGTFH-STDL 231 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 VS F++ I + + G + + I K A RP+ +CLDCSK+ I +S Sbjct: 232 TCVSRLHFSKKI---AQKFGFSENLITEISLKDLNLLAPRPSKTCLDCSKIIKN-GINLS 287 Query: 278 TWKEGVRNILVNI 290 + + + + I Sbjct: 288 SLDDALDTMYNQI 300 >gi|224539746|ref|ZP_03680285.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus DSM 14838] gi|224518646|gb|EEF87751.1| hypothetical protein BACCELL_04655 [Bacteroides cellulosilyticus DSM 14838] Length = 289 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 30/297 (10%) Query: 9 NGQIAQSLSSMCVQDVEIIRVG---RPDI------------DLLKPKDFASFFLSFSPDV 53 NG + + + ++ E I G DI D+ + + ++ F P++ Sbjct: 1 NGFTGRRILNDLSRNDEYIVTGCSLHDDIAPDSGNYRFISADICQMGEQSALFREVRPNI 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 +IN +A + D E E A SIN G +A ++ I++STD+VF+G + Sbjct: 61 VINTSALSVPDYCEAHREEADSINVNAVGQLAFRCEASAARFIHLSTDFVFNGDTGQLYT 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL----AKER 169 E +P+N YG +KL GE++VA +NY I R VY ++L+L + Sbjct: 121 EEDTPDPVNYYGATKLKGEKRVAELCSNYAIARVVVVYGAALPGQHGNILQLVANRLRNN 180 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 EI VV DQ+ TPT +++ I ++ ++ GI+H+ ++ AD A Sbjct: 181 EEIRVVSDQWRTPTYVGDVSQGIEKLINH-------PNNGIYHICGSE-CLTIADIA--- 229 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + YS + + TKQ RP +S L K + T +EG++ + Sbjct: 230 YRVADTLNLDYSLILPVTTKQMGETTPRPRFSGLSIEKARRELGYQPHTLEEGIKLM 286 >gi|157960380|ref|YP_001500414.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] gi|157845380|gb|ABV85879.1| dTDP-4-dehydrorhamnose reductase [Shewanella pealeana ATCC 700345] Length = 307 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 23/301 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEII-------RVGRPDIDLLKPKDFASFFLSFSPD 52 K +V G G + +++ Q D ++I +G +DL + + F PD Sbjct: 6 KIMVTGATGLLGRAVVKQLKQCSDFQVIECGFSRASIGIEVLDLTQSEQVFEFVAKHKPD 65 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 I++ AA D +E P+ A ++NAE + ++AKAA G +YISTDYVFDG + Sbjct: 66 AIVHCAAERRPDVSEQAPQAALALNAEASDSLAKAASQNGAWLLYISTDYVFDGTAPK-Y 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE--RR 170 +E S TNP+N YG+SKL GE VA ++ ILR +Y S +++ L K Sbjct: 125 EESSQTNPVNFYGQSKLQGENLVADSEPSFAILRLPILYGDVESLNESAVMVLLKHLLAP 184 Query: 171 EISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + + D +PTS IA AI ++ +++ + L G +H +A+ +S + + Sbjct: 185 HVEYLDDWAVRSPTSTADIAVAIHEML--VLQLAGKQLSGRYHFSAEE-TMSKY---QML 238 Query: 230 FWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G + + + PT A RP L C +LA+ +K G+ + L+ Sbjct: 239 LVMAEILGLDTGHLIAVTS---PTDSAKRPKDCSLSCERLASLGIKSRLPFKVGIESALL 295 Query: 289 N 289 Sbjct: 296 Q 296 >gi|114045934|ref|YP_736484.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] gi|113887376|gb|ABI41427.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-7] Length = 306 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSPDV 53 +V G G + +++ +I G R + +DL + + +F P+V Sbjct: 3 NIMVTGATGLLGRAVVKQLTAAGHRVIATGFSRAEAGIHRLDLTQAAEVEAFIAREQPEV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E PE A ++N + +A+ A + +YISTDYVFDG + P Sbjct: 63 IVHCAAERRPDVSERSPEHALALNLSASQTLAEVAKTHQAWLLYISTDYVFDGTT-PPYA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---RR 170 E + NP+N YG SKL GE V S N + +LR +Y ++L L + R Sbjct: 122 EDAEPNPVNFYGASKLQGETCVLSTDNGFAVLRLPILYGEVTQLNESAVLVLINQLLDGR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V PTS IA AI ++ + +D S GI+H +A + + + Sbjct: 182 PQRVDHWAIRAPTSTADIANAIAKLIQRQLHAADVS--GIYHFSATQTMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + Q PT A RP L C +LA +K G+ L Sbjct: 236 SLGELLGIDSAHLLP---DQTPTDSAKRPQDCTLSCGRLAALGIYSELAFKTGLTQALSQ 292 >gi|311745813|ref|ZP_07719598.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1] gi|126576015|gb|EAZ80293.1| dTDP-4-dehydrorhamnose reductase [Algoriphagus sp. PR1] Length = 311 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 30/300 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD------------IDLLKPKDFASFFL 47 K + G NG + Q L + ++ + E+I G+ + +D+ Sbjct: 12 KLFITGVNGLLGQKLVAQLLEKDEFEVIGCGKGESRLPFGGFKYVSLDITDEAKVQEVLS 71 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD++I+ AA T VD+ E E A+ N + +A++ + I++STD++F G Sbjct: 72 EIKPDILIHGAAMTNVDECELNQEAAYDANVNATSYLLQASEKLNTHFIFVSTDFIFSG- 130 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSML 163 P+DE + P+N YG++KL E+ V + T + I RT V+ I +L + Sbjct: 131 EEGPLDEEAIAKPVNYYGETKLKAEQLVMNSTFKWAIARTVLVFGIAHDMSRSNIILWVK 190 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + + I VV DQ+ TPT A +A I IA E G+++++ Sbjct: 191 SSLESGKNIQVVDDQYRTPTLAEDLAAGCILIAEQGAE-------GVYNISGSDFMTP-Y 242 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + A + S + ++ +K + A RP + K + T++ + Sbjct: 243 EMA---IMTADYFDLDKSLIAKVDSKIFTQPAKRPLKTGFIIEKARKELGYQPKTFRTAI 299 >gi|257063891|ref|YP_003143563.1| dTDP-4-dehydrorhamnose reductase [Slackia heliotrinireducens DSM 20476] gi|256791544|gb|ACV22214.1| dTDP-4-dehydrorhamnose reductase [Slackia heliotrinireducens DSM 20476] Length = 285 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 19/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 + G G++ +S+ D I ++++ +F S+ P+ IIN A Sbjct: 9 VWIAGATGRLGRSIEYHLDHDTYSIHTTDRELNVTNLDMVTTFAESYRPEFIINCAGIAD 68 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS--RTPIDEFSPTNP 120 D P+ A+ +NA GA +A A+ +G I ISTD VF P+ EF TNP Sbjct: 69 KDVCAANPDEAYRVNALGARNLAVASHYLGATIIQISTDDVFRSTKPNSAPLSEFERTNP 128 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 YGKSK AGE V +VILR++W+Y+ +FL + AK REI V DQFG Sbjct: 129 SFTYGKSKEAGEVLVRELNPRHVILRSSWIYTARKDDFLRMHIADAKAGREIEVPADQFG 188 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PTS+ + ++ I +T G FH++ + G S +F + + Sbjct: 189 SPTSSDTFCKVLMSIM-------ETGEYGTFHLSCE-GLCSRYEFIKRALELAGA----- 235 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 S V + T P KA + LD + T ++ +WK+ + + N Sbjct: 236 STVNMVGTYD-PDKA---FHVELDNMMIRLTGLAKMPSWKDDLEEYMRN 280 >gi|256544657|ref|ZP_05472029.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus vaginalis ATCC 51170] gi|256399546|gb|EEU13151.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus vaginalis ATCC 51170] Length = 283 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 28/295 (9%) Query: 1 MKC---LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ + G +G++ +L + EII + ++D+ K ++ F P +IIN Sbjct: 1 MRINTIWITGAHGRLGSTLVRYLDPLEAEIIATDKDEVDITKQEEVNLFVDRNRPKIIIN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 + T K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E Sbjct: 61 CSGITNRLKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEID 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 NP +YGKSK GEE V ++ + Y I+R + +YS + + + + + V Sbjct: 121 KANPNTVYGKSKFLGEEFVKNFADRYFIVRVSRLYSKENNLVESIIEQ--AKNGIVKVPK 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 ++G+PTSA ++++ +I I T+ GI+H + + G S+ FA+ I + Sbjct: 179 SRYGSPTSAYELSKFLISIM-------GTNAYGIYHASCE-GTCSFRAFAQKIIDITK-- 228 Query: 237 GGPYSKVYRIFTKQYPTKAHR----PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +KV + R PA+ +D L STW++ +++ L Sbjct: 229 --IDAKVEEVRDSD------RIDFEPAFRGIDNYFLNLLDKNTFSTWEDALKDYL 275 >gi|127514272|ref|YP_001095469.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] gi|126639567|gb|ABO25210.1| dTDP-4-dehydrorhamnose reductase [Shewanella loihica PV-4] Length = 307 Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 20/297 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD-------IDLLKPKDFASFFLSFSPDV 53 K ++ G G + ++L ++ V ++ G +DL F + P+V Sbjct: 3 KIMITGATGLLGRALVEQFAKEPVTLLTCGYSRAGKDTHRLDLTDEGAVKQFIETHKPEV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E +PE A ++N +A+AA + G YISTDYVFDG S Sbjct: 63 ILHCAAERRPDVSERDPEAAKALNLAATRQLAQAAKANGAWLCYISTDYVFDGTSPD-YG 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF---LLSMLRLAKERR 170 E T PLN YG++K GE+ + + + +LR +Y S +L ML+ + Sbjct: 122 EEDQTYPLNFYGETKREGEQALIEVSREFAVLRLPILYGRVESLDESAVLVMLKQLVNQV 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +PTS L IA A++++ + D + GI+H T + + + Sbjct: 182 PTQQDDWAVRSPTSTLDIANALVKLVARQQQAGDVA--GIYHFTGTERMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + + A RP L ++L + +++GV+ L Sbjct: 236 KMAEIMGLSSKHISPQSSPS--DLAKRPKDCSLSMARLKSLAIKSEIDFEQGVKYSL 290 >gi|159899116|ref|YP_001545363.1| dTDP-4-dehydrorhamnose reductase [Herpetosiphon aurantiacus ATCC 23779] gi|159892155|gb|ABX05235.1| dTDP-4-dehydrorhamnose reductase [Herpetosiphon aurantiacus ATCC 23779] Length = 282 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 19/254 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L++G +GQ+ L+ D ++ ++DL + + +PD+++ PAA+ Sbjct: 1 MRVLILGASGQLGTELAKTFA-DHHLLMPSHQELDLSQATA-RAAINQLTPDLVLLPAAF 58 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD +P AF N G A A IP +Y+ST+ VF G S+ E+ P Sbjct: 59 TNVDGCALDPARAFRENTLGPKYAALACRDRDIPLVYVSTNEVFSGSSQQAYSEYDQPAP 118 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER----REISVVC 176 +N YG+SK GE+ V + N I R AW++ NF+ ++ RL +ER + VV Sbjct: 119 INAYGRSKWGGEQAVLHHAPNVFITRVAWLFGG-QRNFVRTIARLGRERLQTGEPLRVVT 177 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 D+ GTPT A + A AI Q+ D++L GI+H+ + G S + A + + Sbjct: 178 DEVGTPTHAAEAAWAIRQLV-------DSNLPGIYHVVNE-GACSRHELACAVLAAA--- 226 Query: 237 GGPYSKVYRIFTKQ 250 G V I + + Sbjct: 227 -GIDLPVEPITSAE 239 >gi|253702695|ref|YP_003023884.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251777545|gb|ACT20126.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 730 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 18/289 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G G + QS S +C Q + + R +ID+ A+ + P ++N A + Sbjct: 451 ILIVGKTGTLGQSFSRLCRQRGIPCHLLSRSEIDIASAASVATALDRYLPWAVVNGAGFV 510 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 +D AE + F N G +A G+ + S+D VF+G RT E P +PL Sbjct: 511 RIDDAEGDAGTCFRENTVGPALLAAECARRGVALMTFSSDMVFNGSKRTAYQERDPVSPL 570 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 NIYG+SK E +V ++LRT+ + + NF+ + LR + D Sbjct: 571 NIYGRSKAEAERQVQQIYPGALVLRTSAFFGPWDRYNFVTAALRRLAAGETVEAASDLVV 630 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A + + + GI+H++ + G VSWA+ A + G Sbjct: 631 SPTYIPDLVHAGLDLLLD-------GESGIWHLS-NAGAVSWAELAR---CCAKMAGLDC 679 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 S+V A RP +S L + + + + + + Sbjct: 680 SRVVPRPAASLGYLAPRPPFSVLGSER-----GVVLPELENALTRYFRD 723 >gi|325479881|gb|EGC82966.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii ACS-065-V-Col13] Length = 287 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 73/293 (24%), Positives = 145/293 (49%), Gaps = 25/293 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G++G++ ++ D EI+ + ++D+ K+ ++F P +I+N + Sbjct: 8 KIWITGSHGRLGSTIYRYLDPIDAEIVATDKNEVDITNQKEVSTFIERLRPTIIVNASGL 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T ++ E P+ A+ +NA GA IA AA+ + +ST VFDG + P E P Sbjct: 68 TKKNECEKNPDEAYLLNAIGAKNIAIAANRHKAKIVQLSTGDVFDGNTINPYKEIDTPRP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSK GEE V +++N Y I+R + +YS ++F+ +++ AK+ + + + D+ Sbjct: 128 TTVYGKSKFLGEEFVRNFSNYYYIIRVSRLYS-RENSFVENIIDQAKKGKVV-MPKDRIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A ++++ +I++ T+ G +H + + G S DFA+ + + G Sbjct: 186 SPTPAFELSKFLIELIK-------TNNYGTYHASCE-GYCSHKDFAQEVI----DYLGLD 233 Query: 241 SKVYRIFTKQYPTKAHR----PAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 +++ I + R P++ ++ L T+ R + WK + + Sbjct: 234 AEIEEIIDES------RVDMVPSFRGIENYFLDITNGYRFNDWKSALHEYIEK 280 >gi|117922141|ref|YP_871333.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] gi|117614473|gb|ABK49927.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. ANA-3] Length = 309 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSPDV 53 +V G G + +++ +I G R + +DL + + +F P+V Sbjct: 3 NIMVTGATGLLGRAVVKQLTAAGHRVIATGFSRAEAGIHLLDLTQAAEVEAFIAREQPEV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E PE A ++N + +A+ A + +YISTDYVFDG + P Sbjct: 63 IVHCAAERRPDVSERSPEHALALNLSASQTLAEVAKTHQAWLLYISTDYVFDGTT-PPYA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF---LLSMLRLAKERR 170 E + NP+N YG+SKL GE V + + + +LR +Y +L +++L + R Sbjct: 122 EDAVPNPVNFYGESKLQGETCVLNTDSGFAVLRLPILYGEVTQLSESAVLVLIKLLLDSR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V PTS IA AI ++ + +D S GI+H +A + + + Sbjct: 182 PQRVDHWAIRAPTSTADIANAIAKLIQRQLHAADVS--GIYHFSATQTMTKY----QMLI 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G + + +Q P A RP L C +LA +K G+ L Sbjct: 236 SLGELLGIDTAHLLP---EQTPMDSAKRPQDCTLSCGRLAALGIHSELDFKAGLSRALSQ 292 >gi|332238971|ref|XP_003268678.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 3 [Nomascus leucogenys] Length = 306 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 37/298 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + DCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRP------------------DCSKLETLGIGQRTPFRIGIKESL 291 >gi|294142523|ref|YP_003558501.1| dTDP-4-dehydrorhamnose reductase [Shewanella violacea DSS12] gi|293328992|dbj|BAJ03723.1| dTDP-4-dehydrorhamnose reductase, putative [Shewanella violacea DSS12] Length = 306 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 21/298 (7%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSPD 52 K ++ G G + +++ + Q ++I G R +DL + F PD Sbjct: 3 KIMITGATGLLGRAVKTQIEASQIHQVIATGFSRAQAGIYKLDLTNTQAADEFIAHHQPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I++ AA D +E P A ++N A+A++A GI IYISTDYVFDG + Sbjct: 63 IIVHCAAERRPDVSELNPSAALALNLGATKALAESASKHGIWIIYISTDYVFDGSAPN-Y 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK---ER 169 EF NPLN YG+SK GE+ + + + ++ +LR +Y + ++L L ++ Sbjct: 122 AEFHKPNPLNFYGESKWQGEQALLATSKDFAVLRLPILYGQVETVSESAILILLNHLMDK 181 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + V +PTS IA AI ++ + + S GI+H + +S + + Sbjct: 182 QTQEVDHWAVRSPTSTQDIALAIEKMIDLQVAQQELS--GIYHFSGKE-TMSKY---QML 235 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G + + + A RP L+C +LA +K GV + L Sbjct: 236 LTLGEVLGLDVDHLLPV--SEPSDDAKRPKDCTLNCDRLALLGITSQVDFKSGVLDAL 291 >gi|114603283|ref|XP_001146256.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1 [Pan troglodytes] gi|90102185|gb|ABD85290.1| methionine adenosyltransferase II beta variant 2 [Homo sapiens] Length = 306 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 75/298 (25%), Positives = 124/298 (41%), Gaps = 37/298 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 19 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 138 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 197 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT +A Q+A + D S++G FH + + + A I Sbjct: 198 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIKGTFHWSGNEQMTK-YEMACAI 254 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P S + DCSKL + + ++ G++ L Sbjct: 255 ---ADAFNLPSSHLRP------------------DCSKLETLGIGQRTPFRIGIKESL 291 >gi|289612619|emb|CBI60072.1| unnamed protein product [Sordaria macrospora] Length = 259 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 89/224 (39%), Positives = 127/224 (56%), Gaps = 3/224 (1%) Query: 1 MK-CLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G NGQ+ + L+ C +I+ + R ++L P A+ +IN A Sbjct: 1 MKSILVTGANGQLGRELARIACPPGYDIVALDRAALNLADPVAIAAKVAERDWAAVINGA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 AYTAVDKAE++ A+++NA A +A + GIP + +STDYVF G + P Sbjct: 61 AYTAVDKAENDVVTAWAVNALAPAAFTQACAAAGIPLVQVSTDYVFAGDKDGAWEVTDPV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL +YG SKL GE V S + I+RTAWV S G+NF+ ++LR+A R +SVV DQ Sbjct: 121 APLGVYGASKLGGELAVRSSGARHAIVRTAWVVSAHGTNFVKTILRVAATRDTLSVVDDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 G+PTSA +A+A++ IA L E++D + G FH + G Sbjct: 181 VGSPTSASDLAQALLTIAVRLTEDAD-APTGTFHFSNAVGGTRR 223 >gi|66047703|ref|YP_237544.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] gi|63258410|gb|AAY39506.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae B728a] Length = 294 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 109/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + + L G +H A + + E+ Sbjct: 183 NPTPVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALA 239 Query: 241 SK-VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ N+L Sbjct: 240 IESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPNLL 287 >gi|148508211|gb|ABQ75999.1| predicted dTDP-4-dehydrorhamnose reductase [uncultured haloarchaeon] Length = 290 Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 91/298 (30%), Positives = 136/298 (45%), Gaps = 26/298 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD--------IDLLKPKDFASFFLSFSP 51 M+ L+IG +G + ++ D+E+ +D + + P Sbjct: 1 MRLLIIGGSGLVGSNIVQEAETNDIEVYATHNTSPSEYTEISLDKTDQERTKAIAEEVDP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RT 110 DVII+ AAY AVD E E A+++NA G A AA S+G IY+STDYVF G T Sbjct: 61 DVIIDTAAYHAVDDCETNREHAWTVNAAGTKNAAVAASSVGAHYIYLSTDYVFLGNKSDT 120 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR 170 P E P +P+N Y ++K AGE ++ ILR + VY + G+NF L + Sbjct: 121 PYSEDDPVSPVNYYAETKYAGERASR-IVSDATILRPSVVYGLAGNNFTTWALGELESGE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV--SWADFAEY 228 EI++V DQF T T A +A+A + +A + G++H GPV S F Sbjct: 180 EINIVNDQFSTTTYAPDLAQACVAVAKKGLT-------GLYHA---AGPVRQSRFQFTR- 228 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + S V I T+++ A RP LD S+L N+ + + N+ Sbjct: 229 --QLAEAFDYDPSLVTPITTEEFGQDAPRPTDGSLDSSRLYNSIEYEFRSPQTAFENM 284 >gi|237786087|ref|YP_002906792.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium kroppenstedtii DSM 44385] gi|237758999|gb|ACR18249.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium kroppenstedtii DSM 44385] Length = 315 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 46/312 (14%) Query: 21 VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAED--EPEIAFSINA 78 V+ I +GR ++D+ S PD+IIN AAYTAVD+AED + A ++N Sbjct: 7 VRSGRISCLGRAELDITDQDVIHDVLDSEQPDLIINAAAYTAVDRAEDPAHQDAARAVNT 66 Query: 79 EGAGAIAKAADSIGIPCIYISTDYVFDGL-----------------------SRTPIDEF 115 +GA +A+AA IP I+ISTDYV+ P+ Sbjct: 67 DGAAYLAQAAAQAEIPFIHISTDYVYGQRDAVESDGGGEPANPTDASEPFVGGHAPLRVD 126 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYS----IFGSNFLLSMLRLAK 167 +PT+ ++YG++KLAG+ V + N VI+RTAWVYS +F+ +M+RL + Sbjct: 127 TPTHAQSVYGRTKLAGDRAVQAAFENTDVPCVIVRTAWVYSGLALPDHHDFVSTMMRLEQ 186 Query: 168 ERR-----EISVVCDQFGTPTSALQIARAIIQIAHNLIENSD----TSLRGIFHMTADGG 218 + R + VV DQ+G+PT+ +AR + +++ + + + H T G Sbjct: 187 QSRGDDSPHVRVVNDQWGSPTNVFDLARGLWELSGASSATINFPAILAPGSVVHCTG-TG 245 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 +W D A +F AE G +V I ++ YPT A RP +S LD S + Sbjct: 246 ACTWWDVARQVF---AEVGADPDRVIPISSEDYPTAAARPHWSVLDNSSWLALGLTPLPA 302 Query: 279 WKEGVRNILVNI 290 W++GV + + Sbjct: 303 WEDGVHRAVTGV 314 >gi|156328608|ref|XP_001618961.1| hypothetical protein NEMVEDRAFT_v1g224653 [Nematostella vectensis] gi|156201079|gb|EDO26861.1| predicted protein [Nematostella vectensis] Length = 291 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 28/281 (9%) Query: 22 QDVEIIRVGRP------------DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE 69 + E+I R DID+ + F + L P IIN AA T VD E++ Sbjct: 18 DNYEVIGFSRGSNRSGRNDFEYYDIDITNKELFIASILKIKPHYIINTAAMTNVDACEND 77 Query: 70 PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKL 129 E + +N + + I I++STD++FDG+ E NPL+ YGK+KL Sbjct: 78 KEGCYDLNVNVVENLIEVCQQINTHLIHLSTDFIFDGVKGN-YTEDDEPNPLSYYGKTKL 136 Query: 130 AGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSMLRLAKERREISVVCDQFGTPTSA 185 E+ V T N+ ILRT VY + +L + + ++EI++V DQ+ TPT A Sbjct: 137 ISEKLVQDSTINFTILRTILVYGLVNDMSRSNIVLWVKESLENKKEITIVNDQYRTPTYA 196 Query: 186 LQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR 245 +A A D + G+FH++++ +S + A I + S V Sbjct: 197 EDLAIACKLSI-------DKNATGVFHISSNQ-LLSIYEIALEI---ADAFQLDNSLVKP 245 Query: 246 IFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 I T A+RP + D SK ++KE ++ Sbjct: 246 ISTATLNQTANRPVKTGFDLSKTNKELGFYPKSFKEDLQRF 286 >gi|145223884|ref|YP_001134562.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|315444213|ref|YP_004077092.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] gi|145216370|gb|ABP45774.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium gilvum PYR-GCK] gi|315262516|gb|ADT99257.1| dTDP-4-dehydrorhamnose reductase [Mycobacterium sp. Spyr1] Length = 477 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 21/282 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPK-DFASFFLSFSPDVIINPAAY 60 K LV+G +GQ+ ++L + + + R ++DL P D A + + D I+N AAY Sbjct: 188 KTLVLGADGQLGRALRAAYAEAPHVEFATRAELDLCAPDLDSARRWRDY--DTIVNAAAY 245 Query: 61 TAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVD AE A+++N G A+A+ A + GI +++S+DYVFDG + +P E P Sbjct: 246 TAVDAAETSEGRTAAWTVNVTGVAALARVATAHGITLVHVSSDYVFDGSAASPYREDDPL 305 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +YG++K AG++ V S + ++RT+WV G NF+ +ML LA + + +VV DQ Sbjct: 306 SPLGVYGQTKAAGDQLV-STVPRHYVVRTSWVVGE-GRNFVQTMLSLAAKGVDPAVVDDQ 363 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 FG T ++ARA+ + + + G ++++ G +WAD A F + G Sbjct: 364 FGRLTFTSELARAVRHLTES------RAPYGTYNVSGSGTERTWADIARRTFDLA---GH 414 Query: 239 PYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIR 275 +V + T +Y + A RPA S LD K+ T Sbjct: 415 DPRRVRGVSTAEYFSAATAPVAPRPARSVLDLGKIEATGFWP 456 >gi|284174227|ref|ZP_06388196.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2] gi|261603036|gb|ACX92639.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus 98/2] Length = 272 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 88/281 (31%), Positives = 132/281 (46%), Gaps = 25/281 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPD-----IDLLKPKDFASFFLSFSPDVI 54 M+ L+IG +GQ+ LS++ + E+I+ + +D+ F + PDVI Sbjct: 1 MRILLIGASGQLGVELSNVLSKKHEVIKTYNSSEIQGYKLDITDFPHLEDFIIKKRPDVI 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA T VDK E E + A+ IN++ I +A + I+ISTDYVFDG E Sbjct: 61 INTAAMTDVDKCEIEKDKAYKINSQAVKHIVRAGRVVDSYVIHISTDYVFDGNKGN-YKE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + NP+N YG SKL GE +SY + +I+RT+ V+ F + + + KE + + Sbjct: 120 DNIPNPINYYGLSKLLGEIFASSY-DESLIIRTSGVF--RNKGFPIYVYKTLKEGKTVLA 176 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + +P SA ++A AI ++ D GI H+ G +S + A I E Sbjct: 177 FK-GYYSPISARKLALAIDELL-------DLRKTGIIHVA--GERISRYELAIKI-KEKF 225 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 G +V I + A RP S LD SK I Sbjct: 226 NLPGEVKEVDEIKS----WIAKRPYDSSLDISKARKLLTID 262 >gi|307296820|ref|ZP_07576638.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] gi|306877733|gb|EFN08959.1| dTDP-4-dehydrorhamnose reductase [Sphingobium chlorophenolicum L-1] Length = 727 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 128/267 (47%), Gaps = 13/267 (4%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + Q++ C +++ + R D+DL P A +P ++N A + Sbjct: 445 LLICGATGTLGQAMVRACALRNIPFLLTSRRDLDLSAPSRMAERIEHIAPWAVVNAAGWV 504 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE P+ ++NA+GA A+A+ GIP + S+D VFDG P E PT+PL Sbjct: 505 RVDEAEAAPDPCMTVNAQGAIALARVCQDRGIPTLSFSSDLVFDGQQDRPYVEDDPTSPL 564 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N YG SK E+ + + ++I+RTA +S NF ++R + D Sbjct: 565 NRYGLSKAEMEQGIGALAGRHLIVRTAAFFSPHDEFNFAADVVRSLAQGGHFVAADDLVV 624 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TPT + + + + G++H+T+ G P+SWADFA I +A G Sbjct: 625 TPTYVPHLVATALDLLID-------GEVGLWHLTS-GTPLSWADFARRI---AARCGHDP 673 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++V + + A RPAY+ L + Sbjct: 674 ARVRAVPHRSLGWAAERPAYAALATRR 700 >gi|61806518|ref|NP_001013492.1| methionine adenosyltransferase 2 subunit beta [Danio rerio] gi|82178568|sp|Q5BJJ6|MAT2B_DANRE RecName: Full=Methionine adenosyltransferase 2 subunit beta; AltName: Full=Methionine adenosyltransferase II beta; Short=MAT II beta gi|60688479|gb|AAH91455.1| Zgc:110308 [Danio rerio] Length = 323 Score = 211 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 83/299 (27%), Positives = 128/299 (42%), Gaps = 22/299 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ D + + G RP +LL SF P V Sbjct: 19 RVLVTGATGLLGRAVYKEFKNNDWDALGCGYNRARPFFLKCNLLDEDAVRGVIQSFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E E A ++N +AK A G IYISTDYVFDG P Sbjct: 79 IVHCAAERRPDVVERHTEAAMNLNVHACATLAKEA--GGSFLIYISTDYVFDGR-NPPYG 135 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E NPLN+YGKSKL GE ++ + +LR ++ + S + R+ + Sbjct: 136 ENDAPNPLNLYGKSKLEGEREILRHCPGAAVLRVPILFGEVEKVEESAVTVLFERVQEGA 195 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 ++ Q PT +AR +A ++ D SLRGIFH +A + I Sbjct: 196 ESCTIDHCQQRFPTYTNDVARVCRNMAERALQ--DQSLRGIFHYSAKEQMTK-YEMTCAI 252 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH-NIRISTWKEGVRNIL 287 + P S + + + A RP + L+CS+L ++ + +K +R+ L Sbjct: 253 ---ADAFNLPSSHLIPMTEQPAGAGAQRPQNAQLECSRLELLGLSVESTPFKNAIRDSL 308 >gi|330899678|gb|EGH31097.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 292 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT +R II + L + + L G +H A + + E+ Sbjct: 181 NPTPVDDASRVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALA 237 Query: 241 SK-VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 IESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 285 >gi|149278594|ref|ZP_01884730.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149230589|gb|EDM35972.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 304 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 32/304 (10%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRP---------------DIDLLKPKDFAS 44 MK LV G+NG + Q ++ ++ + + ++D+L P + Sbjct: 1 MKTILVTGSNGLLGQKITERLLETQQFKLIASAKGENRYPVKEGYTYVEMDILDPANVKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + PD II+ AA T VD ED+ E+A +N + + I +++STD++F Sbjct: 61 VIETHKPDAIIHTAAMTNVDTCEDQKELAHELNVTAVETLLANCEPHNIQLVHLSTDFIF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG + P DE + NPL+ YG +KL EE + + + ILRT VY I +++ Sbjct: 121 DG-ADGPYDELAAPNPLSYYGITKLEAEEVIKNSKCRWAILRTIIVYGIVSDMSRSNIVL 179 Query: 165 LAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 AK + I+VV DQ+ PT A +A + + G+F+ + Sbjct: 180 WAKGALEKGNPINVVNDQWRMPTLADDLADCCLLAVQH-------DAHGVFNASGKDMMS 232 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 +E + + S + I + A RP + K + ++ Sbjct: 233 ----ISELVGRVADYWKLDKSLINEISAETLNQTAKRPVRTGFILDKTIRELGYQPRSFA 288 Query: 281 EGVR 284 EG+ Sbjct: 289 EGLA 292 >gi|167031561|ref|YP_001666792.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] gi|166858049|gb|ABY96456.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida GB-1] Length = 308 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 17 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWTPASLTQLLDDHRPDALVNLAYY 76 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 77 FDWFQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 136 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 137 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGSLGRFLTRAEQPQELLLADDRRG 196 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR I+ + L + + L G +H + A + I E+ + Sbjct: 197 NPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILTEAGQHRQLA 253 Query: 241 SKV-YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 254 VQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 301 >gi|146308889|ref|YP_001189354.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145577090|gb|ABP86622.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 294 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 108/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + +L + ++ RP PD ++N A Y Sbjct: 3 MRLMLLGGGSALGHALIRLGAEEDIGFLAPRPPESGWDAASLTELLDETRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E +A+ GI + S+ VFDG T E P Sbjct: 63 FDWFQAESVAESRLQTQERAVERLAELCQHHGIVLLQPSSYRVFDGSRATAYSEKEEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L+ A+ + + D+ G Sbjct: 123 LGLRGQALWRLEQSVRAICPRHVLLRFGWLLDDSREGLLGRFLQRAERDDALYLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + ++ L G +H S + + E+ R Sbjct: 183 NPTPVDDAARVILAVLKQL--DCESPLWGTYHYGGHEASTS-LSLGQAVLSEARHYRSNL 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 240 VEDIAPQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|28867905|ref|NP_790524.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28851141|gb|AAO54219.1| lipopolysaccharide biosynthesis protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 292 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 108/290 (37%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I S+ VFDG T E P Sbjct: 61 FDWFQAESVSEARLTHQERSVERLAELCQHHNITLFQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + + L G +H A + + E+ Sbjct: 181 NPTPVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--P 235 Query: 241 SKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 LAIESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 285 >gi|169836078|ref|ZP_02869266.1| putative dTDP-4-keto-6-deoxyglucose-3, 5-epimerase and dTDP-6-deoxy-L-mannose-dehydrogenase [candidate division TM7 single-cell isolate TM7a] Length = 281 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 86/295 (29%), Positives = 135/295 (45%), Gaps = 25/295 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 ++G NGQ+ ++L E ++D+ + S F +++N AA+T Sbjct: 5 NIFIVGANGQLGRALRQQYP---EARFADIDEMDITDRQSVES-FDWSGISIVLNAAAFT 60 Query: 62 AVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 VD AE PE A+ +NA + + + + ++IS+DYVFDG P E Sbjct: 61 NVDGAET-PEGRVAAWKVNASAVANLTRVCRTHNMTLVHISSDYVFDGTKE-PHFENEDF 118 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL++YG SK AG+ V +N+ +LRT WV G NF+ +ML LA++ +VV DQ Sbjct: 119 SPLSVYGASKAAGDLLVEQL-DNFYLLRTTWVIGE-GKNFVRTMLGLAEKNISPTVVHDQ 176 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T ++ R I + S + G ++ T DG SWAD IF + G Sbjct: 177 IGRLTFTRELVRIIDHLL------STQAPFGTYNATNDGPLESWADITRRIFELA---GH 227 Query: 239 PYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 V T +Y A RP S + KL +T W +++ ++N Sbjct: 228 NDLTVTNTTTAEYFADKDGIAPRPLGSDMSLDKLHST-GFTSHDWTHDLKDYILN 281 >gi|330882854|gb|EGH17003.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 179 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 75/178 (42%), Positives = 107/178 (60%), Gaps = 5/178 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRSLAALGEVIALDRQGADGLCGDLADLEGLTATIRKLAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG + E Sbjct: 61 NAAAYTAVDKAESEPDVAVLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGDSQWQEN 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 +PT PL++YG+SKL GE+ + + ++LRT+WVY+ G+NF +MLRLA ER ++ Sbjct: 121 APTGPLSVYGRSKLMGEQAIQASGAKALVLRTSWVYAAKGNNFAKTMLRLASERDSLN 178 >gi|172035069|ref|YP_001801570.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51142] gi|171696523|gb|ACB49504.1| putative dTDP-4-dehydrorhamnose reductase [Cyanothece sp. ATCC 51142] Length = 292 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 33/302 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV--------GRPD---IDLLKPKDFASFFLSFS 50 K L+ G +G + ++ ++ ++ R + +D+ ++ + F Sbjct: 3 KLLITGASGFLGYNVCQYAQENWQVYGTYYHNRINIDRINCFKVDITNIQELHTVFNEIK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + ++ PE A+ IN + +AK IPC++ STD VFDGL + Sbjct: 63 PDGVIHLAAASKPNYCQNNPEDAYQINVTASLNLAKLCADGNIPCVFTSTDLVFDGL-NS 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P +P++ YG+ K+ E+++ + VI R ++ I ++F+ L + Sbjct: 122 PYQESDPVSPISYYGEQKVQAEQEMLAIYPKTVICRMPLMFGIPSSHAASFIQFFLTTFR 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E + +S+ D++ TP S L A+ ++ + I H+ +S F Sbjct: 182 EGKPLSLFTDEYRTPVSGLTAAKGLLLAL-------EKGEGEIIHLGGKE-RISRYQFGH 233 Query: 228 ---YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +F S E + + P A R + LD SK + +E + Sbjct: 234 LMAEVFDFSQEL------ITPCSQQDVPMAAPRSPDTSLDSSKAFQ-LGYEPLSLREELE 286 Query: 285 NI 286 + Sbjct: 287 QL 288 >gi|327479354|gb|AEA82664.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas stutzeri DSM 4166] Length = 292 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 110/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP PDV+IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPAQGWDAASLTQLLDDNRPDVVINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E A + +A+ + S+ VFDG T E P Sbjct: 61 YDWFQSGQPNEPALAAQERAVERLAELCQHHDFVLLQPSSYRVFDGARTTAYSEKDEVAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ G++ E+ V + +V+LR W+ L +L+ ++ I + D+ G Sbjct: 121 LDARGQALWRIEQSVRALCPRHVLLRFGWLLDDSRDGVLGRVLQRLEQSEAILLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + L G +H A+ + E+A+ R Sbjct: 181 NPTPVDDAARVILAVLKQL--DCQAPLWGTYHYGGHEASTPLL-VAQALLGEAAKYRDVT 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +K+ + A P + L C K+ T I+ W+ G+ ++L Sbjct: 238 TAKLTPVAHADCSDAAAEPQHGVLACKKIFTTFGIKPRAWRTGLPSLL 285 >gi|330960161|gb|EGH60421.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 294 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 109/290 (37%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AK+ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKDPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II I L + + L G +H A + + E+ Sbjct: 183 NPTPVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLL--RE 237 Query: 241 SKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 LAIESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|227827280|ref|YP_002829059.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|227459075|gb|ACP37761.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] Length = 275 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 94/297 (31%), Positives = 140/297 (47%), Gaps = 31/297 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 M+ L+ G +GQ+ LSS+ ++ E+I+ G +DL F + PDV Sbjct: 1 MRILITGASGQLGLELSSVLKEE-ELIKTFNIKEEQGGYKLDLEDFPLLEDFIIKKRPDV 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN A+ T VDK E E AF +NAE I +A+ I I++STDYVFDG R + Sbjct: 60 IINTASLTDVDKCEVEKAEAFKVNAEAVKHIVRASRVIEAYLIHLSTDYVFDG-ERGLYN 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG SKL GE SY ++ +I+RT+ V+ F + + + KE +E+S Sbjct: 119 EGDLPNPINYYGLSKLLGETYALSY-DDSLIVRTSGVF--RHKGFPVYVYKTLKEGKEVS 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + +P SA ++A AI ++ GI ++ G +S D A I + Sbjct: 176 AFK-GYYSPISARKLAEAISELIQYRKT-------GILNVA--GERISRVDLAMKIKDKF 225 Query: 234 AERGGPYSKVYRIFTKQY--PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G I Y A RP S LD SK ++ + E +R ++V Sbjct: 226 NLSG-------SIKEVDYVKGWIAKRPFDSSLDISKAKKILSVDFYSLDENLRYMVV 275 >gi|24375660|ref|NP_719703.1| NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] gi|24350574|gb|AAN57147.1|AE015849_14 NAD dependent epimerase/dehydratase family protein [Shewanella oneidensis MR-1] Length = 306 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 74/285 (25%), Positives = 119/285 (41%), Gaps = 22/285 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 +V G G + +++ +I G +DL + +F P+V Sbjct: 3 NIMVTGATGLLGRAVVKQLTAAGHRVIATGFSCAEANIHKLDLTQAIAVEAFIARERPEV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E PE A ++N + +AKAA G +YISTDYVFDG + P Sbjct: 63 IVHCAAERRPDVSEQSPEQALALNLSASQTLAKAAKQHGAWLLYISTDYVFDGTT-PPYA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---RR 170 E + NP+N YG+SKL GE V + + + +LR +Y ++L L + R Sbjct: 122 EDAAPNPVNFYGESKLQGETCVLNTDSRFAVLRLPILYGEVTQLSESAVLVLINQLLDSR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA AI ++ + +D + GI+H ++ + + + Sbjct: 182 PQRVDAWAIRSPTSTADIAGAIAKLIKRQLHAAD--VLGIYHFSSPQTMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNI 274 + + T P A RP L C +LA Sbjct: 236 SLGELLAIDTAHLTPELT---PMDSAKRPQNCTLSCGRLAALGIY 277 >gi|197105533|ref|YP_002130910.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] gi|196478953|gb|ACG78481.1| dTDP-4-dehydrorhamnose reductase [Phenylobacterium zucineum HLK1] Length = 789 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 18/286 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G G + ++L+ C + ++ R ++ L A+ P +IN A + Sbjct: 487 LLIVGATGTLGKALARACEWRGIDYRLTSRAELSLDDADSIAAALDGCGPWAVINAAGWV 546 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE + NA+GA +A+ G+P + S+D VFDG + P E P PL Sbjct: 547 RVDEAEACAADCLAANADGAVRLARICAERGLPLVGYSSDLVFDGSAGRPYVESDPPAPL 606 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFG 180 N+YG+SK E +V + +++RTA +S F NF ++ RE D Sbjct: 607 NVYGESKARAEREVLALGGQALMIRTAAFFSPFDPYNFAAHVVGTLSAGREFVAAEDLVV 666 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + A + + + G+ H+ A+ G VSWA FA I +AE G Sbjct: 667 SPTYVPDLVDASLDLLLD-------GDAGLRHL-ANAGEVSWAGFARMI---AAELGLDA 715 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 +V + + A RP + L + + + + V Sbjct: 716 GRVLGVRADSFGWAAARPQHVPLSTER-----GRVMPSLENAVARY 756 >gi|71737452|ref|YP_276636.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298488876|ref|ZP_07006900.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558005|gb|AAZ37216.1| lipopolysaccharide biosynthesis protein, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156551|gb|EFH97647.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 294 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 108/290 (37%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L AKE E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II I L + + L G +H A + + E+ Sbjct: 183 NPTPVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--P 237 Query: 241 SKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 LAIESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 287 >gi|217971668|ref|YP_002356419.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] gi|217496803|gb|ACK44996.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS223] Length = 304 Score = 208 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 K +V G G + +++ + E++ G +DL P +F P V Sbjct: 3 KIMVTGATGLLGRAVVKQLELTGHEVVATGFSRASERVHKLDLTAPLAVEAFIAREQPQV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E P+ A ++N + A+A AA + IYISTDYVFDG Sbjct: 63 IVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNAWLIYISTDYVFDGTQPK-YA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL---AKERR 170 E + T+P+N YG+SKL GEE V + + ++ +LR +Y ++L L ERR Sbjct: 122 EDAATDPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQVEKLSESAVLVLVNQLIERR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA+AI ++ IE ++GI+H +A + + + Sbjct: 182 AQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAPI--VQGIYHFSAAETMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T PT A RP L C++LA + G R L Sbjct: 236 TLGDILQLSTAHLTPEST---PTDNAKRPRDCSLSCARLAALGIRTDIDFATGARQALTQ 292 >gi|170719739|ref|YP_001747427.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] gi|169757742|gb|ACA71058.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida W619] Length = 294 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 112/292 (38%), Gaps = 12/292 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPEDGWTPASLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +AE EP +A +A+ I + S+ VFDG T E Sbjct: 63 FDWFQAESVSEPRLAQQ--ERSVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ Sbjct: 121 VPLGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDR 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G PT AR I+ + L + L G +H + A + I E+ + Sbjct: 181 RGNPTPVDDAARVILSVLKQL--DCTAPLWGTYHYAGNEATTPLA-LGQAILAEAGQHRQ 237 Query: 239 PYSKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V P + P + L C K+ +T I+ W+ G+ +L Sbjct: 238 LA--VQAPTAQAHAARPDASEEPQNAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|257066021|ref|YP_003152277.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii DSM 20548] gi|256797901|gb|ACV28556.1| dTDP-4-dehydrorhamnose reductase [Anaerococcus prevotii DSM 20548] Length = 287 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 19/290 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K + G++G++ ++ D EI+ + ++D+ K+ ++F P +I+N + Sbjct: 8 KIWITGSHGRLGSTIYRYLDPIDAEIVATDKNEVDITNQKEVSTFIERLRPTIIVNASGL 67 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + ++ E P+ A+ +NA GA IA AA+ + +ST VFDG + P E P Sbjct: 68 SKKNECEKNPDEAYLLNAIGAKNIAIAANRHQTKIVQLSTGDVFDGNTINPFKEIDTPRP 127 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +YGKSK GEE V +++N Y I+R + +YS + F+ +++ AK+ + I + D+ Sbjct: 128 NTVYGKSKFLGEEFVRNFSNYYFIIRVSRLYS-RENAFVENIIDQAKKGKVI-MPKDRIS 185 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT A ++++ +I++ TS G +H + + G S +FA+ + Sbjct: 186 SPTPAFELSKFLIELIK-------TSNFGTYHASCE-GYCSHKEFAQEVMNYMGLEAEIE 237 Query: 241 SKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + P+ + R Y LD T R + WK + + Sbjct: 238 EVIDESKVDMVPSFRGIRNYY--LDI-----TGGYRFNDWKSALHEYIDK 280 >gi|146304023|ref|YP_001191339.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] gi|145702273|gb|ABP95415.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera sedula DSM 5348] Length = 293 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 31/303 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---------IDLLKPKDFASFFLSFSP 51 M+ +V G G + + + +D E++ V +DL SP Sbjct: 1 MRVVVTGAGGLLGKRIVQAF-KDYEVVGVYHRSQPETSPFLVLDLSSLN--LRPIEELSP 57 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVII+ AA T VDK E EP++A +N + I K + +YISTDYVFDG R Sbjct: 58 DVIIHAAALTDVDKCEREPDLARLLNVDVTREIVKVSKRTNAFLVYISTDYVFDGT-RGN 116 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLRLAK 167 E TNP+N+YG +KL GE+ V + +++RT+ Y NF L +L+ K Sbjct: 117 YREEDETNPVNVYGLTKLEGEKLVRDV--DSLVVRTSTPYGSNPASGKDNFALWLLKKLK 174 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ + DQ +PT + + + I+ G+ H+ VS +F+ Sbjct: 175 AGERVNALVDQVTSPTLNTNFSLMLREAVDRRIK-------GVLHLAGRS-QVSRYEFS- 225 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + + + A RP S L+ SK A + + + +E + + Sbjct: 226 --LALARTFGLNETLINPAHFNEMKWFARRPMNSSLNVSK-AMSLEHKPMSLQEALSELR 282 Query: 288 VNI 290 I Sbjct: 283 REI 285 >gi|26987239|ref|NP_742664.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida KT2440] gi|24981880|gb|AAN66128.1|AE016241_5 dTDP-4-rhamnose reductase-related protein [Pseudomonas putida KT2440] Length = 294 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + + L G +H + A + I E+ + R Sbjct: 183 NPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQYRQLA 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 240 VQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|150400814|ref|YP_001324580.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3] gi|150013517|gb|ABR55968.1| dTDP-4-dehydrorhamnose reductase [Methanococcus aeolicus Nankai-3] Length = 305 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 35/307 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD--------------IDLLKPKDFASFF 46 K +IG G I ++ + + + R D +D+ Sbjct: 3 KIAIIGL-GMIGYEITKKYNELGYDTHIINRSDKGFFKNNDNITNHFVDITDENKIKKTI 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + +PD ++N AA+T VD E E E A+ NA G + + IP +ISTDYVFDG Sbjct: 62 ENINPDFVVNTAAFTNVDLCETEKEQAYKTNALSVGYVGAPCKKLNIPLCHISTDYVFDG 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVY--SIFGSNFLLSML 163 E NP+N YG +K GE+ + ++ I+R + Y S NF + +L Sbjct: 122 -EDGNYVENDEINPINYYGYTKAEGEKILNELNHDLTSIVRISVPYCISPVKVNFFMWVL 180 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + K+ +++++ DQ+ TPT ++ I+ I G+FH G VS Sbjct: 181 DMLKKGEDMNILIDQWNTPTFINELVDGIVII-------HKKDASGLFHF-GGGEKVSRY 232 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 +FA + + + + + + KA+RP + L+ K+ I++ T V Sbjct: 233 EFA---LKVAEIFEMDKTPINPVESSEMNWKANRPKDTTLNNGKIERKLKIKLKT----V 285 Query: 284 RNILVNI 290 L I Sbjct: 286 DECLKEI 292 >gi|304411499|ref|ZP_07393112.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|307306725|ref|ZP_07586467.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] gi|304350026|gb|EFM14431.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS183] gi|306910693|gb|EFN41122.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica BA175] Length = 304 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 23/286 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 K +V G G + +++ + E++ G +DL P +F P V Sbjct: 3 KIMVTGATGLLGRAVVKQLELTGHEVVATGFSRASERVHKLDLTAPLAVEAFIAREQPQV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E P+ A ++N + A+A AA + IYISTDYVFDG Sbjct: 63 IVHCAAERRPDVSERNPQAALALNLTASQALAMAAKANNAWLIYISTDYVFDGTQPK-YA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL---AKERR 170 E + T+P+N YG+SKL GEE V + + ++ +LR +Y ++L L ERR Sbjct: 122 EDAVTHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQVEKLSESAVLVLVNQLIERR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA+AI ++ IE ++GI+H +A + + + Sbjct: 182 AQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAPI--VQGIYHFSAAETMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIR 275 + + T PT A RP L C++LA T IR Sbjct: 236 TLGDILQLSTAHLTPEST---PTDNAKRPRDCSLSCARLA-TLGIR 277 >gi|160873576|ref|YP_001552892.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|160859098|gb|ABX47632.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS195] gi|315265806|gb|ADT92659.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS678] Length = 304 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 130/300 (43%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 K +V G G + +++ + E++ G +DL P +F P V Sbjct: 3 KIMVTGATGLLGRAVVKQLELTGHEVVATGFSRASERVHKLDLTAPLAVEAFIAREQPQV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E P+ A ++N + A+A AA + IYISTDYVFDG Sbjct: 63 IVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNAWLIYISTDYVFDGTQPK-YA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL---AKERR 170 E + T+P+N YG+SKL GEE V + ++++ +LR +Y ++L L E R Sbjct: 122 EDAATHPVNFYGESKLKGEEIVLNTSDDFAVLRLPILYGQVEKLSESAVLVLVNQLIESR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA+AI ++ IE ++GI+H +A + + + Sbjct: 182 AQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAPI--VQGIYHFSAAETMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T PT A RP L C++LA + G R L Sbjct: 236 TLGEILQLSTAHLTPEST---PTDNAKRPRDCSLSCARLAALGIRSDIDFATGARKALTQ 292 >gi|77461252|ref|YP_350759.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] gi|77385255|gb|ABA76768.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf0-1] Length = 294 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 107/290 (36%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEDGWDAASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAEAVSESRLAGQERAIERLAELCQHHNIVLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSPEGILGRFLARAEQPEELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + I E+ R Sbjct: 183 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILSEA--RSLHP 237 Query: 241 SKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ + +L Sbjct: 238 LAIEAPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAALPGLL 287 >gi|152998986|ref|YP_001364667.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] gi|151363604|gb|ABS06604.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS185] Length = 304 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 K +V G G + +++ + E++ G +DL P +F P V Sbjct: 3 KIMVTGATGLLGRAVVKQLELTGHEVVATGFSRASERVHKLDLTAPLAVEAFIAREQPQV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E P+ A ++N + A+A A + IYISTDYVFDG Sbjct: 63 IVHCAAERRPDVSEQNPQAALALNLTASQALAMAVKANNAWLIYISTDYVFDGTQPK-YA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---RR 170 E + T+P+N YG+SKL GEE V + + ++ +LR +Y ++L L + RR Sbjct: 122 EDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQVEKLSESAVLVLVNQLIDRR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA+AI ++ IE ++GI+H +A + + + Sbjct: 182 AQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAPI--VQGIYHFSAAETMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T PT A RP L C++LA + GV L Sbjct: 236 TLGEILQLSTAHLTPEST---PTDNAKRPRDCTLSCTRLAALGICSEINFATGVHQALTQ 292 >gi|113971860|ref|YP_735653.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] gi|113886544|gb|ABI40596.1| dTDP-4-dehydrorhamnose reductase [Shewanella sp. MR-4] Length = 306 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 20/299 (6%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSPDV 53 +V G G + +++ +I G R + +DL + + +F P+V Sbjct: 3 NIMVTGATGLLGRAVVKQLTAAGHRVIATGFSRAEAGIHRLDLTQAAEVEAFIAREQPEV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E PE A ++N + +A+AA + +YISTDYVFDG + P Sbjct: 63 IVHCAAERRPDVSERSPEHALALNLSASQTLAEAAKNHQAWLLYISTDYVFDGTT-PPYA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---RR 170 E + NP+N YG SKL GE V + + +LR +Y ++L L + R Sbjct: 122 EDAEPNPVNFYGASKLQGETCVLNTDRGFAVLRLPILYGEVTQLSESAVLVLINQLLDSR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V PTS IA AI ++ + +D S GI+H +A + Sbjct: 182 PQRVDHWAIRAPTSTADIANAIAKLIQRQSDGADVS--GIYHFSAMQTMTKYQMLLGLGE 239 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + + + A RP L C +LA +K G+ L Sbjct: 240 LLGVDSAHLLPEQTPMDS------AKRPQDCTLSCGRLAALGIYSELAFKTGLTQALSQ 292 >gi|187736304|ref|YP_001878416.1| dTDP-4-dehydrorhamnose reductase [Akkermansia muciniphila ATCC BAA-835] gi|187426356|gb|ACD05635.1| dTDP-4-dehydrorhamnose reductase [Akkermansia muciniphila ATCC BAA-835] Length = 301 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 13/288 (4%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G +G++ L++ + E+++ GR DL LS ++N AA Sbjct: 3 RTLVFGADGRVGSRLAAYLEEHGLEVVKCGRGFCDLKDLSALKRVLLSSGATHVVNCAAV 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + ++ D+PE A +NA +A+ G+ I++STDYV DG R E P Sbjct: 63 SGLEACLDDPETAHCVNAMAPEMMARICRLEGMRFIHLSTDYVLDGRRRGLKTEEGKCRP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVVCDQF 179 +N+YG+SKL E +V + +I R +WV+ +F +LR A +R ++ V D++ Sbjct: 123 VNVYGESKLEAEFRVREEMPDALIARVSWVFGNPERPSFPEMVLRRAMKREPLAAVADKW 182 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 PT + + +A+ ++ G+ H+ G PVSW +A + + + G Sbjct: 183 SMPTWVEDLCAWLRFLAY------ESGASGVLHLCQSGEPVSWHSYAVAVLKCAVKHGLL 236 Query: 240 YSKVYRIFTKQYPTKA----HRPAYSCLDCSKLANTHNIRISTWKEGV 283 S + + ++ +A RP ++ + +L++ + ++E + Sbjct: 237 PS-LPPVAEQKLDEQAGFRDARPRHTAMSSERLSSLMKQPVRAYEEAI 283 >gi|330812026|ref|YP_004356488.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380134|gb|AEA71484.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 289 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 105/285 (36%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPEDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAEAVSEQRLASQERAVERLAELCQHHNIVLLQPSSYRVFDGSRATAYSEKDEPVPLGV 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L A++ E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLLRFGWLLDDSADGILGRFLARAEQPEELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + L G +H A + I E+ + Sbjct: 181 PVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTEARALHPLAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ + ++L Sbjct: 238 PTPQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAALPSLL 282 >gi|72012984|ref|XP_783113.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] gi|115960529|ref|XP_001183196.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] Length = 300 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 119/303 (39%), Gaps = 24/303 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD-----IDLLKPKDFASFFLSFSP 51 MK LV G +G + ++L + DV + R +D+ + F P Sbjct: 1 MKVLVTGASGLMGRALMREFERTPSCDVLGLAFSRAKGSLRKVDIRDEGEVRKVMQEFQP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I++ A D E + E A +N IAK + +G IYISTDYVFDG P Sbjct: 61 DAIVHAAVQRRPDVVEKDEEAAKKVNCSATETIAKISAEMGTFLIYISTDYVFDGTK-PP 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKE 168 TNPLN YG+ KL GE+ ++ N ILR +Y + + +L Sbjct: 120 YKPTDATNPLNKYGQQKLEGEKISQAHAPNCAILRVPVLYGQIETVEESAVTVLLNTLVN 179 Query: 169 RREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R + ++ D PTS IA Q+ + T + G+FH + Sbjct: 180 REKTDMIDDCCTRCPTSVDDIAVVCRQMCERWKTDPKT-MSGVFHWCGSEFMTKY----T 234 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTH-NIRISTWKEGVRN 285 I + P+ + + PT RP LD SKL W+E ++ Sbjct: 235 MITKIANAFDLPHDHLKPNPVQ--PTGGTLRPKDCSLDRSKLEALGIGQTTPIWEE-LQK 291 Query: 286 ILV 288 ++ Sbjct: 292 VMA 294 >gi|294146452|ref|YP_003559118.1| dTDP-4-dehydrorhamnose reductase [Sphingobium japonicum UT26S] gi|292676869|dbj|BAI98386.1| dTDP-4-dehydrorhamnose reductase [Sphingobium japonicum UT26S] Length = 744 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + ++++ C +++ I R ++DL P+ A+ +P ++N A + Sbjct: 457 LLICGATGTLGRAMARACALRNIPFILTSRAELDLTAPETVAAALDRIAPWAVVNAAGWV 516 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+AE + S NA GA A+AKA G+ + S+D VFDG P E P P Sbjct: 517 RVDEAETARDACLSANARGAVALAKACGDRGVASLSFSSDLVFDGKKGAPYVEDDPVAPR 576 Query: 122 NIYGKSKLAGEEKVASY-----TNNYVILRTAWVYSIFGSN-FLLSMLRLAKERREISVV 175 N YG SK EE +A+ + ++I+RTA +S + F ++++R + I Sbjct: 577 NCYGLSKAEMEEGIAALGAPHPSGRHLIIRTAAFFSPHDDHNFAVAVVRSLRRGETILAA 636 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D TPT + + + + G +H+T +G +SWADFA I + Sbjct: 637 EDLIVTPTYVPHLVATSLDLLID-------GEAGPWHLT-NGEALSWADFARRI---AMS 685 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 G S++ + + A RPA + L + Sbjct: 686 CGCDPSRIRGVPHRTLGWTAERPANAALASRR 717 >gi|70607434|ref|YP_256304.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM 639] gi|68568082|gb|AAY81011.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus acidocaldarius DSM 639] Length = 282 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 21/295 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVII 55 M L+IG +GQ+ Q L ++D + RP +D + P+VII Sbjct: 1 MVTLIIGGSGQLGQELGK-LIKDSILTFSSRPIEGGIYLDTRDYIRVEDLIMKTKPEVII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N +A T VDK E + A S+N+ + +AA + ISTDYVFDG R +E Sbjct: 60 NTSAITDVDKCEVDRINAHSVNSLAVKHMVRAASITKSYFVQISTDYVFDGN-RGNYNED 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NPLN YG +KL GE SY + VI RT+ +Y NF L +L+ ++ ++ V Sbjct: 119 DLPNPLNYYGLTKLLGETYSLSYDYSLVI-RTSGIYGSNKENFPLYVLKSLEKGSKVRAV 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D + +P + Q+A AI+Q+ GI ++ D +S D A I + Sbjct: 178 WDMYYSPINVKQLAEAIVQLL-------PLRKTGILNIAGD--RISRYDLALKI---AKM 225 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + ++ +A RP S LD S + ++ + + +EG+R ++ ++ Sbjct: 226 SSLNENLIEAASYEEMSWRAKRPKDSSLDSSTVKKYVSVNL-SLEEGLRRLINDV 279 >gi|289704883|ref|ZP_06501300.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58] gi|289558379|gb|EFD51653.1| putative dTDP-4-dehydrorhamnose reductase [Micrococcus luteus SK58] Length = 471 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 24/295 (8%) Query: 3 CLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDIDLLKPKDF-ASFFLSFSPDVIINPAAY 60 LV+G GQ+ ++L + + GR D+ P + F ++N +A Sbjct: 189 ILVLGAGGQLGRALVVRAEAAGIPVEAHGRDTWDMTDPASWPREHFRGLR--AVVNASAM 246 Query: 61 TAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG--LSRTPIDEFS 116 TAVD AE + A+++NA +A+ G+P ++STDYVFDG Sbjct: 247 TAVDAAETPEGRAQAWAVNATAVAELARRCTEAGVPLAHVSTDYVFDGALPVGREHPVDH 306 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P PL +YG+SK AGE V + + I+RT+WV G NF+ +M LA+ + +VV Sbjct: 307 PLAPLGVYGQSKAAGEAAVRT-VPRHWIVRTSWVIGE-GKNFVATMASLAERGIDPAVVA 364 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 DQ G T A +A A++ + + G FHMT G V+W D A ++F ++ Sbjct: 365 DQHGRLTFADDLADALLHLVTT------DAPTGTFHMTNSGDVVTWHDVARWVFEDT--- 415 Query: 237 GGPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G +V T Y A RP S LD LA +E +R L Sbjct: 416 GHDAGRVSATTTAGYLAGKEGVAPRPTNSALDLGPLAAV-GYTAPDQRERLRTYL 469 >gi|116748974|ref|YP_845661.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] gi|116698038|gb|ABK17226.1| dTDP-4-dehydrorhamnose reductase [Syntrophobacter fumaroxidans MPOB] Length = 294 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 117/301 (38%), Gaps = 28/301 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----------IDLLKPKDFASFFLSFS 50 + L+ G +G + ++ + EI V +DL A F Sbjct: 3 RLLLTGASGLLGWNVCRLKRDRWEIHGVAHRHPIAIDGVRGHVVDLTDRAQTADMFRRLK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +I+ AA T V+ ++ ++ IN E IA IP ++IS+D VFDGLS Sbjct: 63 PRAVIHAAAATNVNWCQENRAESYRINVEAPFHIAALCAESAIPYLFISSDMVFDGLS-P 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSNFLLSMLRLAK 167 P E P +P+N+YG+ K EE VA+ N VI R ++ F S F+ M+ + Sbjct: 122 PYGERDPVSPVNVYGEQKARAEEMVAAEYPNAVICRLPLMFGEPGPFSSGFVQPMIEAMR 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 RE+ + D+ TP SA I GI H+ VS F Sbjct: 182 SGRELPLFTDEIRTPVSAESAVEGIFLALRQ--------TGGILHL-GGRERVSRYAFG- 231 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + + + A RP LD ++ + ++ +R +L Sbjct: 232 --LLLARLAGFGEAGLRACRQRDVKMPAPRPRDVSLDSTRAFS-LGYSPGRIEDELRRLL 288 Query: 288 V 288 Sbjct: 289 A 289 >gi|269986680|gb|EEZ92960.1| dTDP-4-dehydrorhamnose reductase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 282 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 77/298 (25%), Positives = 124/298 (41%), Gaps = 26/298 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIIN 56 MK LV+G +G I L+ + + + +D+ ++ + P++IIN Sbjct: 1 MKTLVLGGSGFIGYYLAKYF--NATSASAHQKEGYIKLDITDKEEVSEVLNKIKPELIIN 58 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 A VD E E E A +N ++ + IG + ISTDYVFDG + E Sbjct: 59 STAIADVDLCEKEKETAMLVNGYAVEWLSSLSKEIGAEFVQISTDYVFDGFTGN-YKEED 117 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI----FGSNFLLSMLRLAKERREI 172 NP+N YGKSKL GEE + N+ ++LR Y I + F S++ KE + + Sbjct: 118 NPNPINEYGKSKLIGEEN--ALKNDAIVLRIEMPYGINVAKNKNVFFESVINNLKEGKTV 175 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + DQ +PT I +A+ + GIFH+ + S +F I Sbjct: 176 NAAVDQIISPTFVEDIPKAVEVLVKK-------GANGIFHLASKE-HFSRFEFVNII--- 224 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + + + A RP + L+ K++ I KE + I I Sbjct: 225 ADVFNFDKTIIKPVKLADFKMLAKRPKNTFLNIDKISK--FYEIKPLKENLEKIKNEI 280 >gi|312963314|ref|ZP_07777797.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] gi|311282394|gb|EFQ60992.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens WH6] Length = 292 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 107/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ +P D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPKPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAEAVSETRLAAQEFAIERLAELCQHHTITLVQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSVDGTLGRFLARAEQPDELLMADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + I E+ Sbjct: 181 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTEARNFHALA 237 Query: 241 SKV-YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ +L Sbjct: 238 IEAPTAQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPALL 285 >gi|148545785|ref|YP_001265887.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] gi|148509843|gb|ABQ76703.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas putida F1] Length = 294 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLVQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + + L G +H + A + I E+ + R Sbjct: 183 NPTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQYRQLA 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 240 VQAPTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 287 >gi|119961083|ref|YP_948860.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] gi|119947942|gb|ABM06853.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] Length = 477 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 19/290 (6%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 LV+G NGQ+ ++L D+ + GR + DL + F S + D IIN AAYTAV Sbjct: 193 LVLGANGQLGKALREAYKDDLSVEFAGRTEFDLTSEEAFGSRNWK-NYDTIINAAAYTAV 251 Query: 64 DKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 D AE A+ IN +A+ A + +++S+DYVFDG S E +PL Sbjct: 252 DAAESADGRRAAWQINVSAVARLARLAVEHDLTLVHVSSDYVFDGTSDL-HSEDEEFSPL 310 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 +YG++K AG+ V S + I+R +WV G+NF+ +M +LA + +VV DQ G Sbjct: 311 GVYGQTKAAGD-AVVSVVPKHYIVRASWVIGD-GNNFVRTMAKLAAAGVKPAVVNDQTGR 368 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T A+ +A +I + + E G ++++ +G P SWAD A +F + G Sbjct: 369 LTFAVDLAESIRHLLDSGAE------YGTYNLSNEGDPQSWADIAADVFELA---GADRD 419 Query: 242 KVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + T++Y T A RP S LD +KL + + +R ++ Sbjct: 420 DISGVSTEEYFRDKTAATRPLNSVLDLTKLTESGFEPLPH-SHRLREMIA 468 >gi|330969754|gb|EGH69820.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 289 Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 107/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ N+L Sbjct: 238 PTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPNLL 282 >gi|104779834|ref|YP_606332.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas entomophila L48] gi|95108821|emb|CAK13517.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas entomophila L48] Length = 294 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP P PD ++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIAFLAPRPPEGGWDPASLTLLLDEHRPDALVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAESVSEQRLAQQERAVERLAELCQHHEIVLVQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ L L A++ +E+ + D+ G Sbjct: 123 LGVRGQALWRIEQSVRATCPQHVLVRFGWLLDESLDGALGRFLTRAEQPQELLLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + L G +H + A + I E+ + R Sbjct: 183 NPTPVDDAARVILSVLKQL--DCKAPLWGTYHYAGNEATTPLA-LGQAILAEAVQWRQLA 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 240 VQQPTAQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRSGLPPLL 287 >gi|302348458|ref|YP_003816096.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15] gi|302328870|gb|ADL19065.1| DTDP-4-dehydrorhamnose reductase [Acidilobus saccharovorans 345-15] Length = 283 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 31/299 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCV------QDVEIIRVGRP------DIDLLKPKDFASFFLSF 49 + LV+G GQ+ L + +DV G +D+ + + Sbjct: 4 RYLVLG-TGQLGSELVGLLRGEREKGKDVAYTYHGSDPFGFGQQLDVTNFELLEDLIIKV 62 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 SPDVIIN A T VD E + A +NAE +A+A +G I++STDYVFDG Sbjct: 63 SPDVIINAVAMTNVDACESDRARALKVNAEAVKHVARAVRVVGSYMIHVSTDYVFDGTKG 122 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKER 169 E NP+N YG +KL GE SY ++ +++RT+ V+ F ++R ++ Sbjct: 123 L-YREDEEPNPINYYGLTKLLGEAYALSY-DDSLVVRTSGVF--RDKGFPSFVVRQLRQG 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 R + F +P SA ++A AI+ +A GI ++ G VS A + Sbjct: 179 RAVKAYA-GFYSPISARKLAEAILALAELRKT-------GIINVA--GERVSRYQLAVEV 228 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G S V + + A RP S LD S+ N + +E +R+ +V Sbjct: 229 ---AKAFGLDPSPVTEVKEVE-GWVAKRPYDSSLDISRARALLNFDFYSLRENLRHAVV 283 >gi|150390215|ref|YP_001320264.1| dTDP-4-dehydrorhamnose reductase [Alkaliphilus metalliredigens QYMF] gi|149950077|gb|ABR48605.1| dTDP-4-dehydrorhamnose reductase [Alkaliphilus metalliredigens QYMF] Length = 278 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 16/289 (5%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK ++G G + L++ + + ++D+ + P V+I A Sbjct: 1 MKVCIVGGKGTLGHELTAQLKVLSPFKTYLLEIENVDIESFERVNKTLKEIVPGVVIYAA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 + V+ E + AF +NA GAG +A IG +YIS+D+VF G + +E P Sbjct: 61 EFNDVEACELRSDDAFIVNAHGAGMVASICAGIGAKMVYISSDFVFSGEKSSSYNEKDPP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 P+NIYG SK GE +V + I+RTA ++ ++F+ ++L L V+ DQ Sbjct: 121 KPINIYGWSKYFGEHEVEKNLQKHFIIRTARIFGERQTSFINTVLNLPTSNSIFKVIGDQ 180 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G+ T +A I + L+ + GI+H + G +W + A I + Sbjct: 181 RGSCTYTKDLALGI----NRLLSENSIKKYGIYHFV-NSGSCTWYEMALKI----CKIKN 231 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + Q KA P L AN + W+E + + Sbjct: 232 LNIRLENVSAAQLNKKALYPTNLTL-----ANHSPFQFRPWEEALEEYI 275 >gi|86160707|ref|YP_467492.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-C] gi|85777218|gb|ABC84055.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-C] Length = 298 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 118/302 (39%), Gaps = 28/302 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGR------------PDIDLLKPKDFASFFL 47 M+ + G NG + + ++ V E++ +GR D DL + L Sbjct: 1 MRIAITGANGLLGGAAVTLAVSGGHEVVGLGRGPCRLAPGRFAWADADLSDGRSVERTLL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+ +++ A T VD E EPE+A+ N G +A+A ++G + +STDYVFDG Sbjct: 61 ELRPEAVLHAGAMTDVDGCEREPELAWRANVGGTEQVARACRALGARLVAVSTDYVFDGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLR 164 E NP Y ++K GEE + + R A VYS + F ++ Sbjct: 121 RGR-YREDDLPNPQGAYARTKRCGEEAALVIAPDAAVARVAVVYSGRPGAKATFATQVVE 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + DQ +PT A A +++ + LRG+ H TA + D Sbjct: 180 KLSRGEPVKAFSDQVVSPTLAESAAEMTLELLL------EHDLRGVLH-TAGATALDRVD 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 FA + A R G ++ + T A RP S LD + + + Sbjct: 233 FARRV----AARFGLSGEIVPVKTADAKLLAPRPLRSGLDVGRAMALLRAKPLAIDVALD 288 Query: 285 NI 286 Sbjct: 289 RF 290 >gi|89068413|ref|ZP_01155816.1| dTDP-4-dehydrorhamnose reductase [Oceanicola granulosus HTCC2516] gi|89046067|gb|EAR52126.1| dTDP-4-dehydrorhamnose reductase [Oceanicola granulosus HTCC2516] Length = 251 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 98/251 (39%), Positives = 137/251 (54%), Gaps = 9/251 (3%) Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +F PD +IN AA+TAVD AE E A ++NAE A+A+ A G+P ++ISTD Sbjct: 4 VRRTLDTFRPDALINAAAWTAVDAAETEEPAAHALNAEAPAALARLAAEAGLPIVHISTD 63 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVASYTNNYVILRTAWVYSIFGSNFL 159 YVF+G P + T PL +YG++KL GE+ +A+ + +LR++WV+S G+NF+ Sbjct: 64 YVFNGADDAPYATDATTAPLGVYGRTKLLGEQGVAMAANPAGWAVLRSSWVFSAHGANFV 123 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 +MLRL ER E+ VV DQ G PT A IARA IA L +D GI+H + Sbjct: 124 KTMLRLGTERDELRVVADQAGGPTPADAIARACATIAEALA--ADPGKSGIYHFSGTPD- 180 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 SWA FA I R G ++ I + YPT A RP S LDC ++ W Sbjct: 181 TSWAGFAREIM----ARAGLDCRIEEIPSADYPTPAPRPLNSRLDCRTTEAAFDLARPDW 236 Query: 280 KEGVRNILVNI 290 G+ +L ++ Sbjct: 237 HIGLDAVLKHV 247 >gi|229584494|ref|YP_002842995.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|228019543|gb|ACP54950.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] Length = 274 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 136/295 (46%), Gaps = 28/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 M+ L+IG +GQ+ LS + ++ + + +DL F + PDVII Sbjct: 1 MRILIIGASGQLGLELSGILKGEIIKVYNTKEIQGGYKLDLTNYSTVEDFIIKKRPDVII 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N A+ T VDK E E F++NAE I +A+ I I+ISTDYVFDG R +E Sbjct: 61 NTASLTDVDKCEVEKAETFTVNAEAVKHIVRASRIIEAYLIHISTDYVFDG-ERGLYNEG 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 NP+N YG SKL GE SY ++ +I+RT+ V+ F + + + KE +E+S Sbjct: 120 DLPNPINYYGLSKLLGETYALSY-DDSLIVRTSGVF--RHKGFPVYVYKTLKEGKEVSAF 176 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 + +P SA ++A AI ++ GI ++ G +S D A I + Sbjct: 177 K-GYYSPISARKLAEAISELIQYRKT-------GILNVA--GERISRVDLAMKIKDKFNL 226 Query: 236 RGGPYSKVYRIFTKQY--PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G I Y A RP S LD SK ++ + E + ++V Sbjct: 227 SG-------SIKEVDYVKGWIAKRPFDSSLDISKAKKVLSVDFYSLDENLHYMVV 274 >gi|126176068|ref|YP_001052217.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] gi|125999273|gb|ABN63348.1| dTDP-4-dehydrorhamnose reductase [Shewanella baltica OS155] Length = 304 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 128/300 (42%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG-------RPDIDLLKPKDFASFFLSFSPDV 53 K +V G G + +++ + E++ G +DL P +F P V Sbjct: 3 KIMVTGATGLLGRAVVKQLELTGHEVVATGFSRASERVHKLDLTAPLAVEAFIAREQPQV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D +E P+ A ++N + A+A AA + IYISTDYVFDG Sbjct: 63 IVHCAAERRPDVSEQNPQAALALNLTASQALAMAAKANNAWLIYISTDYVFDGTQPK-YA 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL---AKERR 170 E + T+P+N YG+SKL GEE V + + ++ +LR +Y ++L L E R Sbjct: 122 EDAATHPVNFYGESKLKGEEIVLNTSADFAVLRLPILYGQVEKLSESAVLVLVNQLIESR 181 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 V +PTS IA+AI ++ IE + GI+H +A + + + Sbjct: 182 AQGVDHWAVRSPTSTADIAQAIDKMIAQHIEAPI--VLGIYHFSAAETMTKY----QMLL 235 Query: 231 WESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + T PT A RP L C++LA + G R L Sbjct: 236 TLGEILQLSTAHLTPEST---PTDNAKRPRDCSLSCARLAALGIRSDIDFATGARQALTQ 292 >gi|213969269|ref|ZP_03397407.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] gi|301381773|ref|ZP_07230191.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato Max13] gi|302061027|ref|ZP_07252568.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato K40] gi|302130521|ref|ZP_07256511.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925947|gb|EEB59504.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] Length = 289 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 107/287 (37%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|330940959|gb|EGH43900.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. pisi str. 1704B] gi|330976707|gb|EGH76748.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 289 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 PTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|330877588|gb|EGH11737.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 289 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 107/287 (37%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|229592860|ref|YP_002874979.1| putative rhamnose biosynthesis-like protein [Pseudomonas fluorescens SBW25] gi|229364726|emb|CAY52697.1| putative rhamnose biosynthesis-related protein [Pseudomonas fluorescens SBW25] Length = 294 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 107/290 (36%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ +P D PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPKPPKDGWDAASLTQLLDDTRPDALINLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E + +A+ I + S+ VFDG T E P Sbjct: 63 FDWFQAEVVSETRLAAQEFAIERLAELCQHHNITLLQPSSYRVFDGSRATAYSEKDEPVP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 123 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSVDGTLGRFLARAEKPDELLMADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + I E+ Sbjct: 183 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGHEATTPLA-LGQAILTEARTFH--P 237 Query: 241 SKVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ L C K+ +T I+ W+ G+ +L Sbjct: 238 LAIESPTAQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRAGLPALL 287 >gi|239788389|dbj|BAH70880.1| ACYPI005374 [Acyrthosiphon pisum] Length = 300 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 25/304 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLSFSP 51 MK + G +G + +S+ + + + G ++LL + + P Sbjct: 1 MKLFLTGASGLLGRSIYERFLNEPDWTVCGISFKRTSPGLTKLNLLDKDAVTNLLNTVCP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVI++ AA DK E +P+ A+ +N + +A A+ + +P +YISTDYVF+G +P Sbjct: 61 DVIVHCAAERFPDKVESDPQAAYDLNVGVSAHLADVANHLNVPLLYISTDYVFNGDE-SP 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSMLRL 165 E +P+N YG+ KL GE+ V + N +ILR +Y S +LL L+ Sbjct: 120 YKETDEPSPINEYGRLKLLGEKAVLAANLNNIILRIPVLYGPVESLEESAITYLLIGLKK 179 Query: 166 AKERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + E+ V + + P+S IA + + I +S+ + GI+ D Sbjct: 180 CQNNNELFKVSNYELRNPSSVDDIAHIVFNLVEKKILSSN-DISGIYQWCGKEMYTK-YD 237 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + + +V + + + RP + LD S++ + +++G++ Sbjct: 238 M---VAKMAKIFDMSMEQVVPVNGQ---SGVKRPFNTLLDVSRINQLGIGTHTNFEDGIK 291 Query: 285 NILV 288 +L Sbjct: 292 TVLA 295 >gi|167945178|ref|ZP_02532252.1| putative dTDP-4-keto-L-rhamnose reductase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 239 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 109/200 (54%), Gaps = 4/200 (2%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 + + R DL + + PD+I+N AAYTAVDKAE E +A +IN G +A+ Sbjct: 2 VALNRAQCDLSRIETIPGIVQEIKPDLIVNAAAYTAVDKAEAEEALATTINGTAVGVLAE 61 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 A ++ STDYVFDG TP E NP+N YG+SKLAGE+ VA Y+I R Sbjct: 62 QARKRNALMVHYSTDYVFDGTKPTPYTEEDEPNPINAYGRSKLAGEQAVAEVGGEYLIFR 121 Query: 147 TAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHN---LIENS 203 T WVY+ G NF+ ++LRLA ER E+ ++ DQ G PT A IA A L E Sbjct: 122 TTWVYAARGHNFIKTILRLAGERDELKIIDDQHGAPTWARNIADATALALARWMLLKEQG 181 Query: 204 DTSLRGIFHMTADGGPVSWA 223 GIF++TA G SW Sbjct: 182 RELPSGIFNLTA-AGSASWF 200 >gi|331018213|gb|EGH98269.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 289 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 106/287 (36%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEENIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I S+ VFDG T E PL + Sbjct: 61 FQAESVSEARLTHQERSVERLAELCQHHNITLFQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|289675565|ref|ZP_06496455.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 289 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDDPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 PTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|318065111|ref|NP_001188160.1| methionine adenosyltransferase II, beta [Ictalurus punctatus] gi|308323562|gb|ADO28917.1| methionine adenosyltransferase 2 subunit beta [Ictalurus punctatus] Length = 322 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 84/299 (28%), Positives = 126/299 (42%), Gaps = 23/299 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP-------DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ D E++ G +LL + + +F P V Sbjct: 19 RVLVTGATGLLGRAVYKEFQNNDWEVLGCGYTRARPRFLSCNLLDEEAVRAVIHNFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E E A ++N +AK A GI IYISTDYVFDG P Sbjct: 79 IVHCAAERRPDVVEHHTEAALNLNVHACATLAKEAA--GIFLIYISTDYVFDGR-NPPYG 135 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS---NFLLSMLRLAKERR 170 NPLN+YGKSKL GEE++ + ILR +Y + + + +E Sbjct: 136 GNDTPNPLNMYGKSKLKGEEEILRHCPGAAILRVPILYGEVEKVEESAVTVLWDCIQEGA 195 Query: 171 EISVV-CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E S V Q PT + + LI+ S L GIFH + + A I Sbjct: 196 ESSTVDHCQQRFPTYTSDVH---VSAGIWLIDVSGLILHGIFHYSGKEQMTK-YEIACAI 251 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH-NIRISTWKEGVRNIL 287 + P S + + + A RP + L+CS+L ++ + +K +RN L Sbjct: 252 ---ADAFNLPRSHLIPLTEQPAGAGAQRPQNAQLECSRLDLLGLSVEPTPFKTAIRNCL 307 >gi|330505173|ref|YP_004382042.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] gi|328919459|gb|AEB60290.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina NK-01] Length = 289 Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MLLGGGSALGQALIRLGAEEDIGFLAPRPPEEGWDAASLTELLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVAESRLQTQERAVERLAELCQHHSIVLLQPSSYRVFDGSRVTAYSEKEEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L+ A+ + + D+ G PT Sbjct: 121 RGQALWRLEQSVRAICPRHVLLRFGWLLDDSREGLLGRFLQRAERDDALYLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPYSK 242 AR I+ + L + ++ L G +H S + + E+ R Sbjct: 181 PVDDAARVILAVLKQL--DCESPLWGTYHYGGHEASTS-LSLGQAVLSEARHYRSNLVED 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 VAPQAHAARPDAADEPQHAVLACKKILHTFGIKPRAWRSGLPSLL 282 >gi|255018974|ref|ZP_05291100.1| hypothetical protein LmonF_16746 [Listeria monocytogenes FSL F2-515] Length = 200 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%) Query: 74 FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE 133 + +N +G I++AA+ +G +YISTDYVFDG + TNPLN YG +KLAGE+ Sbjct: 5 WEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEK 64 Query: 134 KVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAII 193 + ++RT+WV+ +G+NF+ SML+LA+ +E+ VV DQ G PT +A I Sbjct: 65 VALEKNSQTYVIRTSWVFGKYGNNFVYSMLKLAETHKELKVVNDQLGRPTYTYDLADFIR 124 Query: 194 QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT 253 + GI+ + + G +W +FA I + V + ++P Sbjct: 125 FVIEM------NPAYGIYQFS-NSGTATWFEFATEILKD------KDVTVNPCTSDEFPQ 171 Query: 254 KAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 KA RP S + K+ I TW++ + Sbjct: 172 KAERPKTSIMSLEKVEK-LGFNIPTWQDAL 200 >gi|302189336|ref|ZP_07266009.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae 642] Length = 289 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDDPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AK+ E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKDPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 PTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|222053767|ref|YP_002536129.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221563056|gb|ACM19028.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 291 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 123/292 (42%), Gaps = 20/292 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + G++G++ +LS+ + ++ + R D+ P+++IN AA+ Sbjct: 7 IAIFGSSGKVGSALSTAFAKGRYTLVPITRATCDVRDHDQVRRRLQQIKPELVINAAAFN 66 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD E +P A +N +A+ + S G ++IS+D VF G R E S +P+ Sbjct: 67 GVDACEKDPHQALLVNTLFPRLLAELSASQGFLLVHISSDAVFSGTGRETYAESSAASPI 126 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--SNFLLSML-RLAKERREISVVCDQ 178 N+YG +K + + + + Y I R + + I F+ ML R+ + + + D Sbjct: 127 NLYGFTKYGADCFITAIAHRYYIARISVQFGITTGSPQFVEKMLERMQRSTEPLRISNDI 186 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 +P+ + +A AI + + G++H+ +G W + E G Sbjct: 187 VASPSYSQDVATAIRGLVE------EKRPFGLYHLVNEGEASLW-----ELIQELDRIMG 235 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + V + + +P+ + ++ L K+ + W+E +R + Sbjct: 236 LKAAVKPVSHEVFPSLGLKNRHTPLRSEKV-----PPLRPWREALRAYCTEL 282 >gi|152984077|ref|YP_001346418.1| hypothetical protein PSPA7_1032 [Pseudomonas aeruginosa PA7] gi|150959235|gb|ABR81260.1| hypothetical protein PSPA7_1032 [Pseudomonas aeruginosa PA7] Length = 292 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 8/290 (2%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 60 Query: 61 TAVDKAEDEPEIAFSINA--EGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +AE A +NA +A+ I I S+ VFDG T E T Sbjct: 61 HDWFQAEQ--VEAARLNAQERAVERLAELCQHYEILLIQPSSYRVFDGARATAYSEKDET 118 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 PL + G++ E+ V + +V++R W+ + L L A++ + + + D+ Sbjct: 119 LPLGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLYLADDR 178 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RG 237 G PT AR ++ + L + L G +H + A + I E+ R Sbjct: 179 RGNPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNEARSYRS 235 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P A P ++ + C K+ +T I+ W+ G+ +L Sbjct: 236 NLIQEPSAEAHAARPDAADEPQHAVMVCKKILHTFGIKPRAWRAGLPPLL 285 >gi|289628406|ref|ZP_06461360.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647751|ref|ZP_06479094.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 2250] gi|320322814|gb|EFW78907.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. B076] gi|320330400|gb|EFW86379.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869894|gb|EGH04603.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330988234|gb|EGH86337.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 289 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 106/287 (36%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II I L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|322382628|ref|ZP_08056497.1| dTDP-4-dehydrorhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153396|gb|EFX45814.1| dTDP-4-dehydrorhamnose reductase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 200 Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 11/194 (5%) Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 YISTDYVFDG + +P PLN+YG++KL GE S ++ ++RT+WVY Sbjct: 11 KLCYISTDYVFDGCADSPYGTDVLPFPLNVYGRTKLEGEHWTLSLSSRPFVVRTSWVYGQ 70 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 +GSNF+ +MLRL +E R+++VV DQFG PT +A + Q+ T G++H Sbjct: 71 YGSNFVKTMLRLGQEGRKLTVVNDQFGCPTYTADLAGLLEQLLQ-------TDRYGVYH- 122 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 ++ G SW FA+ IF ES G S ++ +++Y A RP+YS L L + Sbjct: 123 ASNSGACSWYGFAKAIFEES---GLDQSLLHPCSSEEYRQLARRPSYSVLSPDSLTDRGF 179 Query: 274 IRISTWKEGVRNIL 287 + W+E +R + Sbjct: 180 KPLRPWREALREFI 193 >gi|291540641|emb|CBL13752.1| RmlD substrate binding domain [Roseburia intestinalis XB6B4] Length = 178 Score = 202 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD------IDLLKPKDFASFFLSFSPDVI 54 K LV G NGQ+ +++ +DV I + +D+ + + PDVI Sbjct: 4 KILVTGCNGQLGRAIRQEYKGEDVSFINTDVAEGEGIVALDITDVNAVLALVRAERPDVI 63 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN AA+T VD E + + A+ INA G ++ AA +G I++STDYVF+G P E Sbjct: 64 INCAAHTNVDACEQQWDAAYRINAIGPRNLSIAAREVGAKMIHVSTDYVFEGNGTKPYTE 123 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 F +P++ YGK+K GE+ V + + Y I RTAW+Y Sbjct: 124 FDEIHPVSAYGKTKAEGEKFVREFADRYFIFRTAWLYG 161 >gi|330874086|gb|EGH08235.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. glycinea str. race 4] Length = 289 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 106/287 (36%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVGSLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II I L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|257058009|ref|YP_003135897.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] gi|256588175|gb|ACU99061.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8802] Length = 294 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 27/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR-----------VGRPDIDLLKPKDFASFFLSFS 50 K L+ G +G + L Q E+ V IDL D + Sbjct: 3 KLLITGASGFLGWHLCQKAQQSWEVYGTYFNHNITIPNVDLLKIDLTNFLDIKTCINQLK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD II+ AA + + + P+ + IN E + IA + IPCI+ STD VFDGL Sbjct: 63 PDGIIHLAAASKPNYCQIYPQESAKINIEASINIANLCSDLEIPCIFTSTDLVFDGL-NP 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN---FLLSMLRLAK 167 P E P +P++ YG+ K+ E+++ + V+ R ++ F+ ++ K Sbjct: 122 PYQETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGPASPTSASFIDFFIKTLK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E +E+S+ D+F TP S+ A ++ + I H+ +S F Sbjct: 182 EGKELSLFIDEFRTPVSSSTAADGLLLALEKASGD-------ILHLGGKE-RISRYQFG- 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + G P + + P A R + LD SK + + +E + ++ Sbjct: 233 --LLMAQVLGLPSHLITPCQQQDVPMAAPRSPDTSLDSSKAFS-LGYNPRSLQEQLDHL 288 >gi|48591|emb|CAA79353.1| WbbW [Yersinia enterocolitica] gi|318605011|emb|CBY26509.1| dTDP-4-dehydrorhamnose reductase [Yersinia enterocolitica subsp. palearctica Y11] Length = 289 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 19/266 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G G + ++S D +I R ++L P+ S+ + PDVI++ AA Sbjct: 4 KILITGGTGMLGAYVTSALKDTDYNVIVTERNTLNLSVPEAIFSYITAEKPDVILHFAAE 63 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E EP A N IA+AA G +Y+S+ VF G + +E P Sbjct: 64 TDVDLCEREPARAGIYNHLATEQIAQAAKFCGAWLLYLSSSNVFGGEGKLSYNELDIPLP 123 Query: 121 LNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERR----EISVV 175 +N YG+SKL GE V + NN++I+R W+ + ++ ++ + I V Sbjct: 124 MNYYGRSKLIGESSVRNACTNNHLIIRAGWMIGGGPDKDHKFVGKIIQQIKAGSTSIKAV 183 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D+ G+ TSA+Q+ II + G H A G +S D A I Sbjct: 184 SDRLGSITSAMQLCNFIIWAI-------NKRHTGTLHF-ASSGTISRFDIACAIGDLLNF 235 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYS 261 +G + + + +P A RP YS Sbjct: 236 KG----DIIPVHSSVFPLSAPRP-YS 256 >gi|302205388|gb|ADL09730.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis C231] gi|308275626|gb|ADO25525.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis I19] Length = 460 Score = 201 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 22/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + R D+D+ D VIIN AAYT Sbjct: 181 KVLVTGANGQLGRTLKKVFPH---AEFCSRTDLDIT--TDITEARRWADYSVIINAAAYT 235 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + A+ NAE +A A GI +++S+DYVFDG E P +PL Sbjct: 236 AVDAAETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDGELPV-HSEQEPFSPL 294 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK AG+ V S + ++RT+WV G+NF+ +ML LA R VV DQ G Sbjct: 295 SVYGQSKAAGDTAV-SVAPQHYVVRTSWVVGE-GNNFVSTMLSLAARRISPQVVNDQLGR 352 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T +A I + N + G+++++ G VSWA A+ +F + G S Sbjct: 353 LTFTEDLAAGIRFLLDNH------APYGVYNLSNSGEIVSWAQLAQRVFTLA---GRSAS 403 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +Y A RP +S LD SK+ W++ + + + Sbjct: 404 DVQPVSTTEYFAGKAPAAPRPRHSALDLSKITG-LGFTPRDWQDALASYCTTL 455 >gi|328955704|ref|YP_004373037.1| dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose reductase [Coriobacterium glomerans PW2] gi|328456028|gb|AEB07222.1| dTDP-4-dehydrorhamnose 3,5-epimerase ;dTDP-4-dehydrorhamnose reductase [Coriobacterium glomerans PW2] Length = 486 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 30/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID---LLKPKDFASFFLSFSPDVIINPA 58 + LV G NGQ+ ++ Q+ ++ DID P ++++ S +IN Sbjct: 189 RTLVTGCNGQLGRA-VRTYAQEHDLQGFDYCDIDTFDFADPDAYSAYDWSL-YGTVINCG 246 Query: 59 AYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 AYTAVD+AE +A+ NA G +A+ I +++S+DYVFDG+ + E Sbjct: 247 AYTAVDRAETREGRAVAWRANAAGPALLARTCVEHSITLVHVSSDYVFDGVLDS-HTELE 305 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERR--- 170 P PL +YG++K AG+ VA+ + I+R++WV F + R+A Sbjct: 306 PFAPLGVYGQTKAAGDIAVAT-CPAHYIVRSSWVIGEGRNFVKTMMALSRRVADNDDALT 364 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++SVV DQ G T +AR I + + S G +++T +G SWAD A+ +F Sbjct: 365 QVSVVDDQLGRLTFTRDMARGIFHLLDS------GSDFGTYNLTGEGEVRSWADIAQAVF 418 Query: 231 WESAERGGPYSKVYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G V + T +Y + RP +S LD +K+ T + W+ + Sbjct: 419 DRTCGNG---EAVVPVSTARYYGASEVPVSPRPIHSALDLTKIEAT-GFMPADWERDLTA 474 Query: 286 ILVNI 290 + + Sbjct: 475 YVDAV 479 >gi|300857650|ref|YP_003782633.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium pseudotuberculosis FRC41] gi|300685104|gb|ADK28026.1| dTDP-4-dehydrorhamnose reductase [Corynebacterium pseudotuberculosis FRC41] gi|302329942|gb|ADL20136.1| Putative dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Corynebacterium pseudotuberculosis 1002] Length = 460 Score = 201 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 95/293 (32%), Positives = 140/293 (47%), Gaps = 22/293 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G NGQ+ ++L + R D+D+ D VIIN AAYT Sbjct: 181 KVLVTGANGQLGRTLKKVFPH---AEFCSRTDLDIT--TDITEARRWADYSVIINAAAYT 235 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 AVD AE + A+ NAE +A A GI +++S+DYVFDG E P +PL Sbjct: 236 AVDAAETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDGELPV-HSEQEPFSPL 294 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 ++YG+SK AG+ V S + ++RT+WV G+NF+ +ML LA R VV DQ G Sbjct: 295 SVYGQSKAAGDTAV-SVAPQHYVVRTSWVVGE-GNNFVSTMLSLAARRISPQVVNDQLGR 352 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T +A I + N + G+++++ G VSWA A+ +F + G S Sbjct: 353 LTFTEDLAAGIRFLLDNH------APYGVYNLSNSGEIVSWAQLAQRVFTLA---GRSAS 403 Query: 242 KVYRIFTKQYPT----KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +Y A RP +S LD SK+ W++ + + + Sbjct: 404 DVQPVSTTEYFAGKAPAAPRPRHSALDLSKITG-LGFTPRDWQDALASYCTTL 455 >gi|330953141|gb|EGH53401.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae Cit 7] Length = 289 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 106/285 (37%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSTDGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK- 242 AR II + L + + L G +H A + + E+ + Sbjct: 181 PVDDAARGIISVIKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLHALAIES 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 238 PTAQAHAARPDAGEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|289451026|gb|ADC93942.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Autumnalis] gi|289451110|gb|ADC94025.1| dTDP-4-dehydrorhamnose reductase [Leptospira interrogans serovar Grippotyphosa] Length = 296 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 28/299 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE------------IIRVGRPDIDLLKPKDFASFFLSFS 50 L+ G +G + LS +++ II + +IDLL + Sbjct: 6 ILITGASGLLGHHLSRFFLENGNKVIALRKTHSLGIIGLDEIEIDLLDFNTVKNLLTKIG 65 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD II+ A T VD E +A I+ + + IA+ A I I+ISTD+++DG + Sbjct: 66 PDYIIHCAGLTNVDDCEKNESLAKKIHIDVSQIIAQTASRINSKMIHISTDHLWDGTMQM 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL---SMLRLAK 167 + E P PLN+YGK+K E V + + +ILRT + ++ Sbjct: 126 -VTEDVPVCPLNVYGKTKAESERAVLAVNSEALILRT-NFFGPGLQWRQSLSDWIINSLN 183 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +I+ D F TP S +AR I+ + + GI+H T +S DFA Sbjct: 184 RNEKINAFSDVFFTPISIYHLARVILFLIQKKAK-------GIYH-TVGSERISKYDFAI 235 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 I + + I + A RP L K+ N+ + T + G+ ++ Sbjct: 236 SI---AKSFNKSTELIRPISIQNIQFNALRPLDMSLSTDKIVGFLNVSMPTVQAGIDSL 291 >gi|325847005|ref|ZP_08169831.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480977|gb|EGC84022.1| putative dTDP-4-dehydrorhamnose reductase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 229 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 14/232 (6%) Query: 1 MKC---LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIIN 56 M+ + G +G++ +L + EII + ++D+ ++ F P +IIN Sbjct: 1 MRINTIWITGAHGRLGSTLVRYLDPLEAEIIATDKEEVDITNQEEVNLFVDRNRPKIIIN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 + T K E++P+ A+ +NA GA IA A++ + + +ST VFDG + P E Sbjct: 61 CSGITDRLKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEID 120 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 NP ++YGKSK EE V + + Y I+R + +YS + + + + I V Sbjct: 121 KANPNSVYGKSKFLAEEFVKDFADRYFIVRVSRLYSKENNLVESIIDQ--GKNGLIKVPK 178 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 ++G+PTSA ++++ +I I DT+ G++H + + G S+ FA+ Sbjct: 179 SRYGSPTSAYELSKFLISIM-------DTNAYGVYHASCE-GTCSFRAFAQK 222 >gi|223937497|ref|ZP_03629401.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] gi|223893848|gb|EEF60305.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] Length = 296 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 22/281 (7%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSPD 52 MK LVIG +G + L + + I R +D PD Sbjct: 1 MKVLVIGGSGLVGSHVLKAALAAGHQAIGTYRRSPLSGLVPLDAGDAAAAGKLLDQEKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +++ A +T VD ED+P+ AF+ NAE +A+ GI Y ST Y+FDGL P Sbjct: 61 AVVHAAGWTWVDGCEDDPKRAFAENAEQPANLARLCQKRGIHFTYFSTSYIFDGL-DGPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNN-YVILRTAWVYS--IFGSNFLLSMLRLAKER 169 DE + NP+N+Y +SK GE++V T+ ++ R VY + NF + +E Sbjct: 120 DEDAKPNPINVYSQSKWEGEQRVQQETDGTALLPRIICVYGAEVQKKNFAYQVWNALREG 179 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + +++ DQ G PT A IAR +I + + RG +H+ + ++AE + Sbjct: 180 KALTLPSDQCGNPTYAGDIARWLITLL-------EKRERGPWHLGGPWPTCTRPEWAEKL 232 Query: 230 FWESAERG---GPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 G P V + T KA RP + + K Sbjct: 233 IAAFKAEGIISHPNFAVKTLPTADLRQKALRPLRAGMISMK 273 >gi|237797498|ref|ZP_04585959.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020348|gb|EGI00405.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 289 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 108/287 (37%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAEVVSEARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE EI + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGEILLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR +I + L + + L G +H A + + E+ R + Sbjct: 181 PVDDAARVLISVVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEA--RIAHPLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|330888068|gb|EGH20729.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. mori str. 301020] Length = 289 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 105/287 (36%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRPTCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II I L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K+ +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKILHTFGIKPRAWRAGLPSLL 282 >gi|313496867|gb|ADR58233.1| DTDP-4-dehydrorhamnose reductase [Pseudomonas putida BIRD-1] Length = 289 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 4/285 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP + P PD ++N A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIAFLAPRPPENGWAPSSLTQLLDDHRPDALVNLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE E + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAESVSEQRLAQQERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVPLGM 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V+LR W+ L L A++ +E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGALGRFLTRAEQPQELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPYSK 242 AR I+ + L + + L G +H + A + I E+ + R Sbjct: 181 PVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLA-LGQAILAEAGQYRQLAVQA 237 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 238 PTPQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 282 >gi|307153579|ref|YP_003888963.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] gi|306983807|gb|ADN15688.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7822] Length = 300 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 28/297 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR-----------VGRPDIDLLKPKDFASFFLSFS 50 K L+ G +G + +L + + +I V +DL F + Sbjct: 3 KLLITGASGFLGGNLGKIAASEWDIYGTYCAHPLTLKDVTLIPVDLTDFPSLKQLFAEVN 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +I+ AA + + + PE ++ IN + IA IPC++ STD VF+GL Sbjct: 63 PTAVIHTAAQSKPNFCQQYPEQSYRINVTASLNIAGLCADYNIPCVFTSTDLVFNGL-NA 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN---FLLSMLRLAK 167 P E P +P++ YG+ K+ EE + I R ++ + F+ ++ Sbjct: 122 PYKETDPVSPISYYGEQKVLAEEGMRKIYPKTAICRMPLMFGLSSPTAESFIQPWIKSLN 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + +EI++ D+F TP S AR ++ + GI H+ +S F Sbjct: 182 QGKEINLFIDEFRTPVSGSTAARGLLLALEKVA--------GILHLGGVE-KISRYQFG- 231 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 + P + K A RPA LD S+ A + +E + Sbjct: 232 --LLMAEVLQLPIDLIKSCRQKDLSFAAPRPADVSLDSSQ-ALALGYNPLSLREELE 285 >gi|326332007|ref|ZP_08198292.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Nocardioidaceae bacterium Broad-1] gi|325950145|gb|EGD42200.1| dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Nocardioidaceae bacterium Broad-1] Length = 460 Score = 200 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 93/294 (31%), Positives = 140/294 (47%), Gaps = 25/294 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAY 60 K LVIG+NGQ+ ++L+++ E V ++D+ K A++ + + +I+N AAY Sbjct: 184 KTLVIGSNGQLGRALTAVFP---EADAVDLDELDISDEKAVAAWPWADYQ--LILNAAAY 238 Query: 61 TAVDKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 TAVD AE D A++ NA +A+ A + ++ ST+YVFDG + E P Sbjct: 239 TAVDVAETPDGRRTAWAANATAPALLARVATEHRLTLVHYSTEYVFDGTATE-HTEDEPV 297 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 +PL +Y +SK AG+ VA T + ILRT+WV G NF+ +M LA++ +VV DQ Sbjct: 298 SPLGVYAQSKAAGDIAVAG-TARHYILRTSWVVGD-GKNFVRTMAALAEKGVSPTVVDDQ 355 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G T +A A + + G+++ T G P SW D A +F S G Sbjct: 356 IGRLTFTDTLAAATAHLLRSGAA------YGVYNCTNAGEPCSWRDIAAEVFSLSGRDGA 409 Query: 239 PYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 V T+ Y A RP S + KL T + +R L Sbjct: 410 D---VGATSTEAYFAGKEGVAPRPLNSVMSLDKLTAT-GFEPEDHLDALRRYLK 459 >gi|125584224|gb|EAZ25155.1| hypothetical protein OsJ_08956 [Oryza sativa Japonica Group] Length = 386 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 41/318 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPD------------------IDLLKPKDF 42 + LV+G +G + Q L + E+ + +DL Sbjct: 5 RVLVVGGSGYLGQHLLAALAAGGEVDVAFTHHRDTPPQPLLHALPGLRAFRVDLRSGDGL 64 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI---PCIYI 98 + SF P VI+N AA + + E +P A + N ++ S G I++ Sbjct: 65 RAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNV--PSSLVTWLLSFGNDNTLLIHL 122 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 123 STDQVYEGVK-SFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISP 181 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + M + + +++ D+F P + ++ + + + + + Sbjct: 182 VAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKA----VQV 237 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + + RG +S + + P +D +KL Sbjct: 238 LLNVGGPDRVSRLQMAESV---ADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQ 294 Query: 271 THNIRISTWKEGVRNILV 288 I+ ++++GVR L Sbjct: 295 MLGIKPISFQDGVRATLA 312 >gi|115449925|ref|NP_001048585.1| Os02g0826200 [Oryza sativa Japonica Group] gi|48716437|dbj|BAD23044.1| putative dTDP-4-dehydrorhamnose reductase [Oryza sativa Japonica Group] gi|113538116|dbj|BAF10499.1| Os02g0826200 [Oryza sativa Japonica Group] gi|215697942|dbj|BAG92141.1| unnamed protein product [Oryza sativa Japonica Group] Length = 317 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 41/318 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI-IRVGRPD------------------IDLLKPKDF 42 + LV+G +G + Q L + E+ + +DL Sbjct: 5 RVLVVGGSGYLGQHLLAALAAGGEVDVAFTHHRDTPPQPLLHALPGLRAFRVDLRSGDGL 64 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI---PCIYI 98 + SF P VI+N AA + + E +P A + N ++ S G I++ Sbjct: 65 RAVSESFGQPHVIVNCAAISVPRQCETDPAAAMATNV--PSSLVTWLLSFGNDNTLLIHL 122 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 123 STDQVYEGVK-SFYKEDDETLPVNMYGKSKVAAEKFIIEQCSNYAILRSSIIYGPQTISP 181 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + M + + +++ D+F P + ++ + + + + + Sbjct: 182 VAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKA----VQV 237 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + + RG +S + + P +D +KL Sbjct: 238 LLNVGGPDRVSRLQMAESV---ADVRGYSHSIIKSVSASSVDRGVASPPDISMDITKLTQ 294 Query: 271 THNIRISTWKEGVRNILV 288 I+ ++++GVR L Sbjct: 295 MLGIKPISFQDGVRATLA 312 >gi|226942810|ref|YP_002797883.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] gi|226717737|gb|ACO76908.1| dTDP-4-dehydrorhamnose reductase [Azotobacter vinelandii DJ] Length = 292 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + ++L + + RP PD ++N A Y Sbjct: 1 MRLMLLGGGSALGRALVHLGAEADVSFLAPRPPERGWDSASLTRLLDETRPDALVNLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +A+ + A +A+ I + S+ VFDG T E P Sbjct: 61 HDWFQADTLDAERLANQERAAERLAELCQHHRIILLQPSSYRVFDGTRATAYSEKDEPAP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ L E+ V + +V+LR W+Y L L A+ +++ D+ G Sbjct: 121 LGLRGQALLRVEQSVRALCPRHVLLRFGWLYDDTLDGVLGRFLLRAERESVLALADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR ++ + L + L G +H + A F + + E+ R Sbjct: 181 NPTLVDDAARVMLAVLKQL--DCQAPLWGTYHYGGHEATTALA-FGQAVLGEARVYRRLA 237 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + P A P ++ L C K+ NT I+ W+ G+ N+L Sbjct: 238 VEDIQALPHGATPDAAEEPQHAVLSCRKILNTFGIKPRAWRAGLPNLL 285 >gi|119962499|ref|YP_947906.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] gi|119949358|gb|ABM08269.1| dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Arthrobacter aurescens TC1] Length = 469 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 22/295 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASF-FLSFSPDVIINPAAY 60 + LV+G GQ+ +L D + GR D+ + + + S+S +IN AA+ Sbjct: 189 RTLVLGAEGQLGTALRHAFEGDATVEFAGRAQFDITSEASYRAVNWRSYS--AVINAAAF 246 Query: 61 TAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 TAVD AE PE A++INA +A+AA + +++S+DYVFDG + E Sbjct: 247 TAVDAAET-PEGRAAAWNINATAVSRLARAAVEHSLTLVHVSSDYVFDGTAEVHF-EDEM 304 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 PL +YG+SK AG+ + + I+RT+WV G NF+ +M LA + SVV D Sbjct: 305 PTPLGVYGQSKAAGDAA-VAAVQKHYIVRTSWVVGE-GRNFVRTMASLAAKGASPSVVDD 362 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q+G + A IA I + + + G ++++ G SWA A ++ S G Sbjct: 363 QWGRLSFAKDIAAGIRHLLDH------QAPYGTYNLSNGGERQSWAGVARDVYRLS---G 413 Query: 238 GPYSKVYRIFTKQY--PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I T Y P A RP S LD SK+ T + + L ++ Sbjct: 414 ADPERVTPISTADYMGPGTAPRPRSSVLDLSKIRAT-GFDPPAATQRLAEFLRSL 467 >gi|119773649|ref|YP_926389.1| NAD dependent epimerase/dehydratase family protein [Shewanella amazonensis SB2B] gi|119766149|gb|ABL98719.1| NAD dependent epimerase/dehydratase family protein [Shewanella amazonensis SB2B] Length = 301 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 116/290 (40%), Gaps = 21/290 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPDVI 54 +V G G + +++ + G +DL A+ +P VI Sbjct: 3 NIMVTGATGLLGRAVVKSLSASHTVTGTGFSRAAEGILRLDLTDADAVAAAVAEIAPQVI 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 ++ AA D + P+ A ++N A+ +AA + G IYISTDYVFDG P E Sbjct: 63 VHCAAERRPDVSAQNPDAAKALNLSATEALCQAAKACGAWLIYISTDYVFDGTE-APYAE 121 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---RRE 171 + NP+N YG++KL GE+ V ILR +Y ++L L ++ ++ Sbjct: 122 DAAPNPVNFYGETKLMGEQAVTRLLPESAILRLPILYGEVERLSESAVLVLIEQLLDYQK 181 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 V PTS IA AI + +E + GI+H +A ++ + Sbjct: 182 QGVDDWAVRRPTSTADIAEAIKGMIAKHVEGEK--ISGIYHFSA-AETMTKHGM---VVA 235 Query: 232 ESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANTHNIRISTWK 280 + G + + PT A RP L C +L + ++ Sbjct: 236 LAEVLGKDSGHLIAQSS---PTDTAKRPKDCTLSCKRLEALGLLNTRPFR 282 >gi|308235687|ref|ZP_07666424.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved [Gardnerella vaginalis ATCC 14018] gi|311114284|ref|YP_003985505.1| bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase [Gardnerella vaginalis ATCC 14019] gi|310945778|gb|ADP38482.1| fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis [Gardnerella vaginalis ATCC 14019] Length = 480 Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 30/303 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD----VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + LV G NGQ+ +++ + ++ E + + D+ D++ + IIN Sbjct: 189 RTLVTGCNGQLGRAIQNYAKENNLEGFEYVDLDS--FDIANKDDYSRYDWDL-YGTIINT 245 Query: 58 AAYTAVDKAED--EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AAYT+VD A+ A++ N +G +AK A I ++IS+DYVFDG E Sbjct: 246 AAYTSVDGAQTLQGRRAAWNSNVKGVANLAKIAQEHHITLVHISSDYVFDGTQEN-HKEN 304 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK-----ERR 170 PL +YG++K A + V + + I+R++W+ G NF+ M+ A E Sbjct: 305 EDFAPLGVYGETKAAADSLV-ANVPQHYIIRSSWIVGE-GRNFVTRMIDFANRLKNGESV 362 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + DQ G T A + + + + + + G +++T G SW D A+ +F Sbjct: 363 SVQAPIDQTGRLTFASDLVKGMFHLLNTQAQ------YGTYNLTGSGKIASWHDIAQKVF 416 Query: 231 WESAERGGPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + SK+ Y + RP LD K+ + W++ + + + Sbjct: 417 TQ---LNVDTSKIEANRVDDYTRISNGSPRPHKCALDLQKIESA-GFTPCDWEDLLESYV 472 Query: 288 VNI 290 I Sbjct: 473 NRI 475 >gi|116671224|ref|YP_832157.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24] gi|116611333|gb|ABK04057.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter sp. FB24] Length = 474 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 19/291 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV+G +GQ+ ++L + D + GR DL F + IIN AAYT Sbjct: 191 KILVVGADGQLGKALRELYDGDATVEFAGRSGFDLGSEASFTERNWK-NYSTIINAAAYT 249 Query: 62 AVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 AVD AE A+++N +A+ A G+ +++S+DYVFDG+ + DE P Sbjct: 250 AVDTAETAEGRAAAWAVNVAAVARLARTAVEHGLTLVHVSSDYVFDGVRES-HDETEPFT 308 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AG+ V S + I+RT+WV G+NF+ +M LA E SVV DQ Sbjct: 309 PLGVYGQTKAAGD-AVVSVVPRHYIVRTSWVIGE-GNNFVRTMASLAGRGIEPSVVNDQI 366 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G + IA I + + + G ++++ DG P SWAD A ++ S G P Sbjct: 367 GRLSFTEDIAAGIQHLLDS------GADYGTYNLSNDGEPQSWADIAADVYELS---GQP 417 Query: 240 YSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + V + T++Y A RP S LD +KL N+ + ++ + L Sbjct: 418 RTAVTGVSTEEYFKGKAAAPRPLNSVLDLTKLKNS-GFKPRASRDVLETYL 467 >gi|257067486|ref|YP_003153741.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810] gi|256558304|gb|ACU84151.1| dTDP-4-dehydrorhamnose reductase [Brachybacterium faecium DSM 4810] Length = 479 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 21/270 (7%) Query: 14 QSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSP-DVIINPAAYTAVDKAE--DEP 70 ++L++ + ++ V R +D+ + A+F F+P I+N AA TAVD +E + Sbjct: 198 RALAAWWSRRGDVDVVAREHLDIADARSVAAF--DFAPYGTIVNAAACTAVDASEAPEGR 255 Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 A+++N G G + +AA + +++S+DYVFDG E P +PL +YG++K A Sbjct: 256 RTAWAVNVTGVGHLVEAARAHRATLVHVSSDYVFDGTIEV-HGENEPPSPLGVYGQTKAA 314 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 G++ VA+ ++ I+RT+WV G NF+ +M LA+ + +VV DQ G T +A Sbjct: 315 GDQLVATL-PDHYIVRTSWVIGE-GRNFVATMAALAERGIDPAVVDDQIGRLTFTEDLAA 372 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 AI + GI+++T +G P SWA A +F S G +V + T + Sbjct: 373 AIDHLLVARPA------PGIYNVTGEGEPASWAGIAAEVFALS---GHDPHRVTPVSTAE 423 Query: 251 YPTK----AHRPAYSCLDCSKLANTHNIRI 276 Y A RPA+S LD +K+ T + + Sbjct: 424 YYAGKDGIAPRPAHSTLDLAKIRATGFVPL 453 >gi|294670852|ref|ZP_06735708.1| hypothetical protein NEIELOOT_02556 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307339|gb|EFE48582.1| hypothetical protein NEIELOOT_02556 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 197 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 81/194 (41%), Positives = 107/194 (55%), Gaps = 3/194 (1%) Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 ++ISTDYVFDG P DE +PT P NIYG SKLAGE+ V + V++R +WV+ + Sbjct: 1 MLHISTDYVFDGAGGAPYDEAAPTAPQNIYGASKLAGEQAVLAACRRAVVMRASWVFGAY 60 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 G NF+ +MLRL +ER + +V DQ+G PT+A IA A+I I GI+H Sbjct: 61 GQNFVKTMLRLGRERDSLGIVADQYGAPTAAADIAAALITIVRRHTPGQLAERAGIYHYC 120 Query: 215 ADGGPVSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 SW +FAE IF E+A +G V I T YPT A RPA S LDC K+ Sbjct: 121 G-SPYASWFEFAETIFAEAAAQGVLAKIPAVKPIVTADYPTPAKRPADSRLDCGKIRAVF 179 Query: 273 NIRISTWKEGVRNI 286 I W + ++ Sbjct: 180 GIGPCDWHSALSDL 193 >gi|83643162|ref|YP_431597.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] gi|83631205|gb|ABC27172.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] Length = 300 Score = 198 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 110/303 (36%), Gaps = 31/303 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-----PDI-------DLLKPKDFASFFLSF 49 + LV G +G + + QD E++ D+ DL + + F + Sbjct: 12 RVLVTGASGFLGAHICRALNQDYEVLAQSHQVTLPEDLAPFRVRQDLCDAELTQAMFRNL 71 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 +PD +I+ AA + + + +PE + +N E +A IP ++ STD VFDG Sbjct: 72 TPDAVIHAAALSDPNTCQQQPERSLQVNVEATRLLAALCAERDIPLLFTSTDLVFDGRQG 131 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAK 167 E P NP+N YG+ K E+ + I+R W++ + + + L + Sbjct: 132 V-YRESDPVNPINRYGEHKAMAEKLIREQHPRATIVRMPWMFGLGLLKPSGVTQWLERLR 190 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + ++ D++ + A+ I++ +G+ VS F + Sbjct: 191 QGETLTGFVDEYRSAVDYATAAQGIVRFFQM--------QQGLTLHLGGIETVSRHHFLK 242 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G V + A RP LD + + + +L Sbjct: 243 A---LARTFGLDEDLVQEQKQRDVIMPAKRPRDVSLDSRRARG-LGYKTPF----MDEML 294 Query: 288 VNI 290 + Sbjct: 295 AEL 297 >gi|331012475|gb|EGH92531.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 289 Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 105/287 (36%), Gaps = 8/287 (2%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDVASLTQLLDDTRPDALINLAYYFDW 60 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 +AE + +A+ I + S+ VFDG T E PL + Sbjct: 61 FQAETVSAARLTHQERSVERLAELCQHHNITLVQPSSYRVFDGSRATAYSEKDEPVPLGL 120 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPT 183 G++ E+ V + +V++R W+ L L AKE E+ + D+ G PT Sbjct: 121 RGQALWRIEQSVRATCPQHVLVRFGWLLDDSADGVLGRFLSRAKEPGELLLADDRRGNPT 180 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 AR II I L + + L G +H A + + E+ + Sbjct: 181 PVDDAARVIISIVKQL--DCEAPLWGTYHYAGHEATTPLA-LGQAVLTEARLLH--PLAI 235 Query: 244 YRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P A P ++ L C K +T I+ W+ G+ ++L Sbjct: 236 ESPTAQAHAARPDAAEEPQHAVLACKKNLHTFGIKPRAWRAGLPSLL 282 >gi|70732835|ref|YP_262602.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] gi|68347134|gb|AAY94740.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas fluorescens Pf-5] Length = 292 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 106/296 (35%), Gaps = 20/296 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP D PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPQDGWDAASLTQLLDDTRPDALINLAYY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE E S +A+ I + S+ VFDG T E P Sbjct: 61 FDWFQAESVSEARLSGQERAVERLAELCQHHNIILLQPSSYRVFDGSRATAYSEKDEPVP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V+LR W+ L L A+ E+ + D+ G Sbjct: 121 LGLRGQALWRIEQSVRATCPQHVLLRFGWLLDDSPDGILGRFLARAESPDELLMADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR II + L + L G +H A + E+ + Sbjct: 181 NPTPVDDAARVIISVLKQL--DCAAPLWGTYHYAGQEATTPLA-LGQAALTEARQLHPLA 237 Query: 241 SKVYRIFTKQYPT---------KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + PT A P ++ L C K+ +T I+ W+ + +L Sbjct: 238 I--------EAPTAQAHAASADAAEEPQHAVLACKKILHTFGIKPRAWRAALPALL 285 >gi|186680756|ref|YP_001863952.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186463208|gb|ACC79009.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 735 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 116/287 (40%), Gaps = 18/287 (6%) Query: 5 VIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 ++G G + + + +C + + + R D+D+ P P ++N A Y V Sbjct: 463 IVGATGTLGNAFARLCQVRGISYCLLRRQDMDIANPASVNKALAELQPWAVVNAAGYVRV 522 Query: 64 DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNI 123 D AE EP+I +NAEGA +A A + + S+D VFDG P E PLNI Sbjct: 523 DDAEREPDICLKVNAEGAAILAAACAQHNVALVTFSSDLVFDGAESNPYVETDTVAPLNI 582 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS-NFLLSMLRLAKERREISVVCDQFGTP 182 YG SK+ E+ V +++RT+ + + NF+ LR D +P Sbjct: 583 YGCSKVLAEKLVLQAHPASLMIRTSAFFGPWDEYNFVTIALRQLAAGNTFVAAEDAIVSP 642 Query: 183 TSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 T + A + + + +G++H+ WAD A + + G S Sbjct: 643 TYVPDLVHASLDLLID-------GEKGLWHLANKSAVA-WADLAR---LAAKKAGVSVSN 691 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + T++ A RPAYS L ++ + + L Sbjct: 692 LIARPTQELGFIAPRPAYSVLGSNR-----GELMPHLDSAISRYLEE 733 >gi|218244985|ref|YP_002370356.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] gi|218165463|gb|ACK64200.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 8801] Length = 294 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 120/299 (40%), Gaps = 27/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR-----------VGRPDIDLLKPKDFASFFLSFS 50 K L+ G +G + L Q E+ V IDL D + Sbjct: 3 KLLITGASGFLGWHLCQKAQQSWEVYGTYFNHKITIPNVDLLKIDLTNFLDIKTCINQLK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD II+ AA + + + P+ + IN E + IA + IPCI+ STD VFDGL Sbjct: 63 PDGIIHLAAASKPNYCQIYPQESAKINIEASVNIANLCSDLEIPCIFTSTDLVFDGL-NA 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN---FLLSMLRLAK 167 P E P +P++ YG+ K+ E+++ + V+ R ++ + F+ + K Sbjct: 122 PYKETDPVSPISYYGEQKVKAEQQMLAIYPKTVVCRMPLMFGLASPTSASFIDFFINTLK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E +E+S+ D+F TP S+ A ++ N I H+ +S F Sbjct: 182 EGKELSLFIDEFRTPVSSSTAADGLLLALQKASGN-------ILHLGGKE-RISRYQFG- 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + G P + + P A R + LD SK + + KE + ++ Sbjct: 233 --LLMAQVLGLPSHLITPCQQQDVPMAAPRSPDTSLDSSKAFS-LGYNPLSLKEQLNHL 288 >gi|75909858|ref|YP_324154.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Anabaena variabilis ATCC 29413] gi|75703583|gb|ABA23259.1| dTDP-4-dehydrorhamnose reductase [Anabaena variabilis ATCC 29413] Length = 294 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 28/303 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRP---------DIDLLKPKDFASFFLSFS 50 K L+ G +G + L Q+ E+ ++L + F Sbjct: 3 KLLITGASGFLGWHLCQAAQQEWEVYGTYCSHELSVPGIKLLKVNLTDFLELKQIFNEIK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + + P+ +++IN + +A+ + IP + S++ VFDG+ + Sbjct: 63 PDAVIHTAAQSQPNFCQIHPDESYTINVTASCNLAELCAAASIPYAFTSSELVFDGIK-S 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 P E P+NIYG+ K+ E + + R ++ +F+ ++ K Sbjct: 122 PYKETDTVCPVNIYGEQKVLAEVGILERYPIATVCRMPLMFGNATPTAKSFIQPFIQTLK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +E+++ D+F TP S A+ I+ + +GI H+ +S DF Sbjct: 182 SGQELTLFIDEFRTPVSGTTAAKGILLALEKV--------KGIIHLGGKE-RISRYDFGH 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P + + + A RPA LD S+ + + K + +L Sbjct: 233 I---LAEVFQLPTAGIKACLQQDVNMAAPRPADVSLDSSQAF-ALGYQPLSIKSELEALL 288 Query: 288 VNI 290 + Sbjct: 289 KKV 291 >gi|260832866|ref|XP_002611378.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae] gi|229296749|gb|EEN67388.1| hypothetical protein BRAFLDRAFT_73226 [Branchiostoma floridae] Length = 288 Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 117/300 (39%), Gaps = 32/300 (10%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSPD 52 + L+ G +G + ++L E++ + +DL F P+ Sbjct: 3 RVLITGASGLLGRALMQEFQGAAGWEVLGLAYSRAGGSLKKVDLRDQAAVRETVQEFKPN 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++I+ AA D E + E ++N E +A+AA TDYVFDG P Sbjct: 63 ILIHSAAQRRPDVVEKDEEATSALNVEATRTVAQAAR----------TDYVFDG-KSPPH 111 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLSMLRLAKE 168 P NPLN YG SKLAGE+ + +LR +Y S + + Sbjct: 112 KVTDPPNPLNKYGISKLAGEKVALEVAKDGAVLRVPILYGPVEAIDESAVTVLFGAVQNT 171 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + + + PT IA Q+A ++ D SL G+FH + D + +Y Sbjct: 172 EKTAKMSDYERRYPTHVDDIAAVCRQLAEKRLQ--DPSLHGVFHWSGDE------EMTKY 223 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + + K+ A RP + LD S+L + + ++E ++ +L Sbjct: 224 TMSIAMAEVFSLPSSHLVPDKEPSGGAPRPYNAQLDVSRLTDLGIGKTRPFRESIKEVLQ 283 >gi|288963164|ref|YP_003453443.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] gi|288915416|dbj|BAI76899.1| dTDP-4-dehydrorhamnose reductase [Azospirillum sp. B510] Length = 290 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 25/299 (8%) Query: 1 MK-----CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 M+ L++G +G + + ++ +II +GR +DL + + +P +II Sbjct: 1 MRKTKGPILLVGASGILGSAFDAIIPAASKII-LGRDMLDLHHLDSVIAKVVGVNPSLII 59 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA T V+ AED PE AF++N AGA+AK A G ++ S+ + P E Sbjct: 60 NCAADTDVEGAEDAPERAFAVNVGLAGALAKGASESGAAMLHFSSTGCYGDWKEEPYVED 119 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKERREI 172 P ++ +K GEE V +N +ILR W++ NF+ S L + + EI Sbjct: 120 DMLRPTTVHHHTKAVGEEAVLEAHSNALILRLGWIFGGLPEQKKNFVWSRLVETESKSEI 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 Q G PTSA +A + + IE GIF+ G VS D+ I Sbjct: 180 GANPRQIGNPTSANDVAALSLSLIEKNIE-------GIFNCVGPGRRVSRLDYVSEILRA 232 Query: 233 SAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + G KV + + +A P S ++ LA + W + + + + Sbjct: 233 A----GIQIKVKPV---NFVRRAPVSPNESAINK-MLAAAGFDVMPPWHQSLGCYVQEL 283 >gi|218438541|ref|YP_002376870.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] gi|218171269|gb|ACK70002.1| dTDP-4-dehydrorhamnose reductase [Cyanothece sp. PCC 7424] Length = 295 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 113/299 (37%), Gaps = 28/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----------IDLLKPKDFASFFLSFS 50 + L+ G +G + +L + EI +DL + F + Sbjct: 3 RVLITGASGFLGWNLCQIAQTSWEIYGTYYSHAIQSPNVNFLKVDLTDFNNLKQLFADVN 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +I+ AA + + + PE ++ IN + IA IPC++ STD VFDGL Sbjct: 63 PTGVIHLAAQSKPNFCQQYPEPSYLINVTTSLNIAGLCADYDIPCVFTSTDLVFDGL-NP 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 P E P +P++ YG+ K+ E+ + VI R ++ +F+ S L + Sbjct: 122 PYKETDPVSPISYYGEQKVLAEQGMLQRYPKTVICRMPLMFGFPSPVADSFIQSFLTTLQ 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + +E+ + D++ TP S A+ ++ I H+ +S +F Sbjct: 182 QGKELKLFIDEWRTPVSGSTAAKGLLLALEKGER--------ILHLGGKE-RISRYEFG- 231 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + K A RP LD SK + +E ++ + Sbjct: 232 --GLMAEVLQLKTELIKPCSQKDVIMAAPRPTDVSLDSSKAF-ALGYEPLSLREELQQL 287 >gi|196005271|ref|XP_002112502.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens] gi|190584543|gb|EDV24612.1| hypothetical protein TRIADDRAFT_25402 [Trichoplax adhaerens] Length = 298 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 25/297 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 K L+ G +G + +++ D +++ + +DL F PD Sbjct: 3 KVLITGASGLLGRAIKREFDNDATWKVLGLAYSRAGGDLRRVDLSDVNAVKEVVREFQPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI++ AA D + + ++A +N + + +A A + +Y+STDYVFDG P Sbjct: 63 VIVHAAAERRPDIVDKKTDVARQLNVDVSRNLALIAKTFNCFILYVSTDYVFDGC-NPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIF---GSNFLLSMLRLAKE 168 PLN YG K GE+ V Y ILR +Y + + +L+ + Sbjct: 122 QPADQPAPLNTYGMLKWQGEKAVLETYPKRSGILRLPILYGEVEYLEESAVTVLLKAIQN 181 Query: 169 RREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + + D + PT +A I QI+ ++ D + GI+H + ++ A Sbjct: 182 GNKPGEMSDYEKRYPTYVGDVAVVIRQISDKTLQ--DENFYGIWHWSGLE-ELTKYQMAL 238 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRISTWKEGV 283 I + Y + + P+ A RP S LD S L + + +++++G+ Sbjct: 239 KI---AKAFNIDYKHLVAVNK---PSPGAKRPYNSHLDISTLTQLNFGQQTSFQDGI 289 >gi|149189654|ref|ZP_01867936.1| spore coat polysaccharide synthesis [Vibrio shilonii AK1] gi|148836466|gb|EDL53421.1| spore coat polysaccharide synthesis [Vibrio shilonii AK1] Length = 285 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 24/295 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G G + + EI +D+ F F PD +I+ AA Sbjct: 5 RILITGAGGFFGTRFINRYQGEFEIKGTDVAQLDITDNSAVNQIFTEFQPDFVIHAAAIA 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 D + PE+A +N +GA +AKA +G ++IST+ VF+G S P E S P Sbjct: 65 VTDFCNEHPEVAHKVNVQGAINVAKACKQVGAKLVFISTEQVFNGNSEAGPYTEQSIPVP 124 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 +YG++KL E ++AS +LR W++ + N + + ++ + + Sbjct: 125 DTVYGQNKLEAERELASILPEMWVLRFTWLFGLPERNTTINPNVVWNAIQTLFKGGVMYE 184 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 ++F T ++ +I G +H T S D AE+I E Sbjct: 185 RGNEFRGLTYVHELIEQFPKIFDI--------PYGTYH-TGAHNDASRYDIAEHILTELK 235 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + A + LD SKLA I + K+ + L Sbjct: 236 LEQRLPDILVQCD-------APKTRDVRLDTSKLAAQ-GICFTESKQAITQCLKE 282 >gi|168333505|ref|ZP_02691774.1| DTDP-4-dehydrorhamnose reductase, rfbD ortholog [Epulopiscium sp. 'N.t. morphotype B'] Length = 263 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA-A 59 K +IG+ ++ + L + V+++E++ ++D+ D + P++IIN A A Sbjct: 3 KVWLIGSTSKVGKELLKLLDVREIELLDTDVNEVDITNISDVYKYARMNRPEIIINCANA 62 Query: 60 -YT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 T VDK + +NA A I+ AA I I++S+ VF TP EF Sbjct: 63 KETLDVDKI-------YKVNAVAAKNISLAAHDIDAKLIHLSSCEVFGNDKETPYTEFDL 115 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 P IYG SK+AGE V + + Y+I+R Y F+ ++ KE + I + Sbjct: 116 PTPNTIYGLSKMAGERYVRDFKSKYIIIRRGLTYG----GFIQDVIDACKENKSIDAPKN 171 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 QF PTS +A+ I+ + ++ GI+H G P S + A I A Sbjct: 172 QFIQPTSPKDLAKLIVSVI-------NSKDYGIYHAVNTGAP-SKYEIAVEI----ARIL 219 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 S + + + +Y L+ L N I +W+EG+ + L Sbjct: 220 KSSSHITAVDADEK-------SYKILENFMLEKVKNYSIGSWQEGLEDYLK 263 >gi|15599264|ref|NP_252758.1| hypothetical protein PA4069 [Pseudomonas aeruginosa PAO1] gi|116052105|ref|YP_789051.1| hypothetical protein PA14_11250 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889650|ref|YP_002438514.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa LESB58] gi|254236957|ref|ZP_04930280.1| hypothetical protein PACG_02981 [Pseudomonas aeruginosa C3719] gi|9950267|gb|AAG07456.1|AE004823_2 hypothetical protein PA4069 [Pseudomonas aeruginosa PAO1] gi|115587326|gb|ABJ13341.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126168888|gb|EAZ54399.1| hypothetical protein PACG_02981 [Pseudomonas aeruginosa C3719] gi|218769873|emb|CAW25634.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa LESB58] Length = 294 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 112/293 (38%), Gaps = 14/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE +A+ I + S+ VFDG T E T P Sbjct: 63 HDWFQAEQVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYSEKDETLP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ + L L A++ + + + D+ G Sbjct: 123 LGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLFLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR ++ + L + L G +H + A + I E+ R Sbjct: 183 NPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNEA--RTYRS 237 Query: 241 SKVYRIFTKQYPTKAHR------PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + A R P ++ + C K+ +T I+ W+ G+ +L Sbjct: 238 NLIQEPSAEAH---AARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLPALL 287 >gi|17230828|ref|NP_487376.1| hypothetical protein alr3336 [Nostoc sp. PCC 7120] gi|17132431|dbj|BAB75035.1| alr3336 [Nostoc sp. PCC 7120] Length = 294 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 118/300 (39%), Gaps = 28/300 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV--GRP---------DIDLLKPKDFASFFLSFS 50 K L+ G +G + L + Q+ E+ ++L + F Sbjct: 3 KLLITGASGFLGWHLCQVAQQEWEVYGTYCSHALSIQGIKLLKVNLTDFSEIKQIFNEIK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + + P+ ++ IN + +A+ + IP + S++ VFDG+ + Sbjct: 63 PDAVIHTAAQSQPNFCQIHPDESYKINVTASCNLAELCATSSIPYAFTSSELVFDGV-NS 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 P E P+NIYG+ K+ E + I R ++ +F+ ++ + Sbjct: 122 PYKETDTVCPVNIYGEQKVLAEVGILERYPIATICRMPLMFGNATPTAKSFIQPFIQTLQ 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +E+++ D+F TP S A+ I+ + G+ H+ +S DF Sbjct: 182 SGQELTLFIDEFRTPVSGTTAAKGILLTLGKV--------TGLIHLGGKE-RISRYDFGH 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +A P + + + A RPA LD S+ + + K + +L Sbjct: 233 I---LAAVFQLPTTGIKACLQRDVNMAAPRPADVSLDSSQAF-ALGYQPLSIKSELEALL 288 >gi|328478998|gb|EGF48488.1| dTDP-4-dehydrorhamnose reductase [Lactobacillus rhamnosus MTCC 5462] Length = 186 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 14/197 (7%) Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 +YISTDY+FDG S+ P N YG++K GE++V Y Y I+RT+WV+ Sbjct: 1 DATLVYISTDYIFDGDSKEIYTVNDQPAPRNEYGRAKYEGEQQVQKYLKKYYIIRTSWVF 60 Query: 152 SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 +G NF +ML LAK +E++VV DQ+G P+ +A + ++ GI+ Sbjct: 61 GEYGHNFAYTMLNLAKTHKELTVVDDQYGRPSWTKTLAEFMTFAVDQHLD------YGIY 114 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 H++ D +W +FA I + V + + +YP KA RP +S LD SK T Sbjct: 115 HLSNDNS-CNWYEFASAILAD------KDVTVKPVSSAEYPQKAWRPRHSILDLSKTKAT 167 Query: 272 HNIRISTWKEGVRNILV 288 I TW++ +++ L Sbjct: 168 -GFEIPTWQDALKDFLK 183 >gi|107103583|ref|ZP_01367501.1| hypothetical protein PaerPA_01004653 [Pseudomonas aeruginosa PACS2] gi|296387374|ref|ZP_06876873.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas aeruginosa PAb1] gi|313109510|ref|ZP_07795465.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa 39016] gi|310881967|gb|EFQ40561.1| putative dTDP-4-rhamnose reductase-related protein [Pseudomonas aeruginosa 39016] Length = 292 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 112/293 (38%), Gaps = 14/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 1 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE +A+ I + S+ VFDG T E T P Sbjct: 61 HDWFQAEQVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYSEKDETLP 120 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ + L L A++ + + + D+ G Sbjct: 121 LGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEQPQPLFLADDRRG 180 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR ++ + L + L G +H + A + I E+ R Sbjct: 181 NPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNEA--RTYRS 235 Query: 241 SKVYRIFTKQYPTKAHR------PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + A R P ++ + C K+ +T I+ W+ G+ +L Sbjct: 236 NLIQEPSAEAH---AARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLPALL 285 >gi|119486569|ref|ZP_01620619.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC 8106] gi|119456186|gb|EAW37318.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Lyngbya sp. PCC 8106] Length = 291 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 111/299 (37%), Gaps = 28/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-----------DLLKPKDFASFFLSFS 50 K LV G +G + ++ + E+ R DL + + Sbjct: 3 KILVTGASGFLGWNICQIAASQWEVYGTYRSKAVKIPGVNIIQRDLTDFQGLKALIEEIQ 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P II+ AA + + + P+ + IN + +A I C + STD VF+GL Sbjct: 63 PTAIIHAAAQSKPNYCQLHPDETYPINVTASINLAGLCADYSIACAFTSTDLVFNGL-NP 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 P E P +P++IYG+ K+A E+ + + R ++ +F+ ++ K Sbjct: 122 PYKETDPVSPVSIYGEQKVAAEQGMLERNPQVAVCRMPLMFGKASPHAVSFIQGFVQALK 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +E+ V D++ T S A ++ I H+ +S DFA+ Sbjct: 182 AGKELQVFTDEYRTSVSGTTAAEGLLLALAKAKG--------ILHLGGKE-RMSRYDFAQ 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + P K+ + A RP LD SK + + +E + + Sbjct: 233 ---LMAEVFELPIEKIQPCLQQDVQMPASRPPDVSLDSSKAFG-LGYQPLSIREELERL 287 >gi|226358054|ref|YP_002787793.1| bifunctional protein: glycosyl hydrolase family 1; dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] gi|226319697|gb|ACO47691.1| putative bifunctional protein: glycosyl hydrolase family 1; dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] Length = 728 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 19/287 (6%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L++G G++ Q ++ +C + ++ + DID+ + F + P +IN Y Sbjct: 450 LLILG-TGRLGQVVARLCHDRGLDHRLLSPADIDITNQPALEALFEAERPWAVINTLGYG 508 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 +D+AE E + + ++ GA +A+ + G+ + S+D VF G P E +P+ Sbjct: 509 KIDQAELEHQEFWLTHSVGAALLAQVCERRGVQLLTFSSDQVFGGDGEAPYHELDVASPV 568 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYS-IFGSNFLLSMLRLAKERREISVVCDQFG 180 N+YG++KL E +V + +I+R++ V+ G L LR + + V D Sbjct: 569 NVYGRAKLESERQVLANHPTALIVRSSAVFGSGTGRGLLSEALRTLQTGETVLVDQDHRF 628 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +PT + + + + G++H+ + G +W AE + + G P Sbjct: 629 SPTYLPDLVHTSLDLLID-------GESGVWHLV-NTGESTW---AEMVGRLAHAGGLPD 677 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ ++ A RP YS L + + + + L Sbjct: 678 HRIRAASARELGWVAPRPRYSALRSDRAQL-----LPSLDHALDRYL 719 >gi|13541731|ref|NP_111419.1| dTDP-4-dehydrorhamnose reductase [Thermoplasma volcanium GSS1] gi|14325137|dbj|BAB60062.1| dTDP-4-dehydrorhamnose reductase [Thermoplasma volcanium GSS1] Length = 280 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 19/286 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G+ GQ+ + L + + + +D+ + A F SPD++IN AA+T Sbjct: 3 NILIFGHTGQLGRELLKLVPNAISG-SINGKRVDITDYSEIALLFSQASPDIVINSAAFT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+ E E E A+ +NA G I K D I ISTDYVF+G R E +P+ Sbjct: 62 NVDRCEKEREKAYLVNAIGVRNIVKLCDKYNSKLIQISTDYVFNG-ERGNYKEDDIPDPI 120 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG +K G+ S ++N +++RT+ V+ +NF L + K E+ V + + Sbjct: 121 NYYGYTKSIGDAYALS-SDNTIVVRTSGVFG-NANNFPLFVYNRLKAGLEVD-VIKGYYS 177 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 P A +++A+ + S + RGI ++ G +S D A I + G Sbjct: 178 PIHANLLSKALYVLI------SKGTHRGIINIA--GQRISRFDLATAI---ANRFGFDQK 226 Query: 242 KVYRIFT-KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + + K+ A RP S LD S + T + + + Sbjct: 227 LIREVPDLKEMV--ARRPFDSSLDISYAKKLIDFDFYTLESNLNSF 270 >gi|326491931|dbj|BAJ98190.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 320 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 124/318 (38%), Gaps = 40/318 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------------------DIDLLKP 39 + LV+G +G + Q L + + + V DL Sbjct: 5 RVLVVGGSGYLGQHLLAALATGGDGVGVDVAFTHHRGAAPRALLDALPGVRAFRADLRSG 64 Query: 40 KDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI---PC 95 + SF P VI+N AA + E +P A + N ++ + S G Sbjct: 65 DGLEAVSESFGQPHVIVNCAAISVPRACEMDPAAAMATNV--PSSLVDWSLSFGNDKTLL 122 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS--- 152 I++STD V++G+ + E T P+N+YGKSK+A E+ V +NY ILR++ +Y Sbjct: 123 IHLSTDQVYEGVK-SFYKEGDETLPVNMYGKSKVAAEKFVTDKCSNYAILRSSIIYGPQT 181 Query: 153 ---IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + S + M + + +++ D++ P I I+ + + + + Sbjct: 182 VSPVEKSLPIQWMDNVLSQGQQVDFFNDEYRCPVYVKDIVDVILSLTKSWLSDGKKIR-- 239 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + VS AE + + RG S + + P +D +KL Sbjct: 240 VLLNVGGADRVSRLQMAESV---AEVRGYSKSIIKSVPASSVNRGVASPPDISMDITKLT 296 Query: 270 NTHNIRISTWKEGVRNIL 287 T I+ T+ +GVR L Sbjct: 297 QTLGIKPITFLDGVRATL 314 >gi|317484421|ref|ZP_07943336.1| RmlD substrate binding domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924340|gb|EFV45511.1| RmlD substrate binding domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 285 Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 16/275 (5%) Query: 17 SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSI 76 + E + D +LL P + +PDVI N ++ + AE +P+ A S+ Sbjct: 21 QQLAGNGWEAQSLDFEDCNLLNPVELQPRIEFINPDVIFNTVSWNTENPAEKQPQEALSV 80 Query: 77 NAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA 136 N + ++ S+D VF+G +P E +P++ GKS+LAGE+ + Sbjct: 81 NRGLPAFLGGLVKGTPRFLVHYSSDQVFNGRKDSPYTEEDKADPISPCGKSRLAGEQALL 140 Query: 137 SYT-NNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 +N I+RT W++ G +FL +L AK + V+ DQ G+PT A +A+A +Q+ Sbjct: 141 ELNADNICIIRTGWLFGPDGDSFLKRLLGRAKTEGTVEVIHDQIGSPTYAKDLAQATLQL 200 Query: 196 AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 G++H+ A+ G +W + A E+ + V + + K Sbjct: 201 VKLRA-------PGLYHV-ANSGQATWCELA----AEAVRQASLPCSVRAVASSD---KT 245 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 R Y L +K + W + +R + ++ Sbjct: 246 LRANYEVLSSAKYTALTGCPMRPWSQALREYIYSV 280 >gi|330834784|ref|YP_004409512.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] gi|329566923|gb|AEB95028.1| dTDP-4-dehydrorhamnose reductase [Metallosphaera cuprina Ar-4] Length = 300 Score = 195 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 22/274 (8%) Query: 16 LSSMCVQDVEIIRV---GRPDI-----DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAE 67 +S + E+I V +P+ DL K + PDV+I+ AA T VDK E Sbjct: 18 ISQIFSTSHEVIGVYNTSKPEGNYVMSDLSKLDNVRKIVSEIKPDVVIHAAALTNVDKCE 77 Query: 68 DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKS 127 ++ +A +N + IAK+++ G +Y+STDYVFDG+ E NP+N YG + Sbjct: 78 EDKGLAKLLNVDVTREIAKSSNQHGSLLVYVSTDYVFDGVKGN-YREEDEPNPINFYGLT 136 Query: 128 KLAGEEKVASYTNNYVILRTAWVYSIFG----SNFLLSMLRLAKERREISVVCDQFGTPT 183 KL GE +V +++++I RT+ Y NF L +++ K +++VV DQ +PT Sbjct: 137 KLQGEREVMENSSSFIIARTSTPYGSNPASEKDNFALWLIKKLKNNEKVNVVTDQITSPT 196 Query: 184 SALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 A + ++ + I H+T D VS +F+ + + Sbjct: 197 LNTSFALMLKELIESY-----KRYNFIIHLT-DASQVSRYEFS---VKLAEVFESNKELI 247 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + KA RP S L+ K N + Sbjct: 248 TPTTMSEIKWKAKRPKNSSLNVEKANNVLKVNRP 281 >gi|325276581|ref|ZP_08142324.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] gi|324098290|gb|EGB96393.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas sp. TJI-51] Length = 289 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 109/289 (37%), Gaps = 12/289 (4%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAV 63 +++G + Q+L + ++ RP P PD ++N A Y Sbjct: 1 MLLGGGNALGQALIRLGAEEDIAFLAPRPPESGWTPASLTQLLDDHRPDALVNLAYYFDW 60 Query: 64 DKAE--DEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 +AE EP +A +A+ I + S+ VFDG T E PL Sbjct: 61 FQAESVSEPRLAQQ--ERAVERLAELCQHHQITLVQPSSYRVFDGSRATAYSEKDEPVPL 118 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 + G++ E+ V + +V+LR W+ L L A++ E+ + D+ G Sbjct: 119 GLRGQALWRIEQSVRAACPQHVLLRFGWLLDESIDGSLGRFLTRAEQPAELLLADDRRGN 178 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 PT AR I+ + L + + L G +H + + I E+ + Sbjct: 179 PTPVDDAARVILSVLKQL--DCNAPLWGTYHYAGNEATTPLV-LGQAILAEAGQ--YRQL 233 Query: 242 KVYRIFT---KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V P + P ++ L C K+ +T I+ W+ G+ +L Sbjct: 234 AVQAPTAQAHAARPDASEEPQHAVLACKKILHTFGIKPRAWRAGLPPLL 282 >gi|299133411|ref|ZP_07026606.1| dTDP-4-dehydrorhamnose reductase [Afipia sp. 1NLS2] gi|298593548|gb|EFI53748.1| dTDP-4-dehydrorhamnose reductase [Afipia sp. 1NLS2] Length = 286 Score = 194 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 29/300 (9%) Query: 2 KCLVIGNNGQIAQ-SLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 K L+ G G + Q +L++ + +II GRP DL + A F P ++++ AA Sbjct: 3 KVLITGATGMLGQYALAAAKAEGYDIITFGRPQNDLNNIETIAPFIAQIKPSIVLHLAAQ 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T VD E +P +A IN +AKA +G Y+ST VF +T +E +P Sbjct: 63 TDVDLCERDPALAARINVLATREVAKATTMVGGWLGYVSTSNVFGAKEQTVYNELDLPDP 122 Query: 121 LNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAKERR----EISVV 175 +N YG+SK GE+ V Y N++I+R W+ S + ++ + R +I V Sbjct: 123 VNYYGRSKFWGEQMVIQYAPHNHLIVRAGWMIGGGASKDHKFVGKIIAQIRNGASQILAV 182 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D+ G+ T+A +AR L+ ++ G+FH A G V+ A I A+ Sbjct: 183 DDKQGSITAAENLARF-------LLASAKRGRIGLFHF-ASKGTVTRFQIACEI----AK 230 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH------NIRISTWKEGVRNILVN 289 G V + + +P A R A S + + +I I +W E ++ + Sbjct: 231 SLGYSGVVRGVRSNIFPLSAPR-ATS----EGIESIFLSDAAEDIYIGSWNEDLQKYISQ 285 >gi|254242751|ref|ZP_04936073.1| hypothetical protein PA2G_03516 [Pseudomonas aeruginosa 2192] gi|126196129|gb|EAZ60192.1| hypothetical protein PA2G_03516 [Pseudomonas aeruginosa 2192] Length = 294 Score = 194 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 111/293 (37%), Gaps = 14/293 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP + PD +IN A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPEQGWDAASLTTLLDETRPDAVINLAFY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 +AE +A+ I + S+ VFDG T E T P Sbjct: 63 HDWFQAEQVEAERLGAQERAVERLAELCQHYEILLVQPSSYRVFDGARATAYSEKDETLP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L + G++ E+ V + +V++R W+ + L L A+ + + + D+ G Sbjct: 123 LGLRGQALWRMEQSVRAACPRHVLIRFGWLLDESPNGLLGRFLSRAEHPQPLFLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 PT AR ++ + L + L G +H + A + I E+ R Sbjct: 183 NPTPVDDAARVVLSVLKQL--DCQAPLWGTYHYGGLEATTTLA-LGQVILNEA--RTYRS 237 Query: 241 SKVYRIFTKQYPTKAHR------PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + A R P ++ + C K+ +T I+ W+ G+ +L Sbjct: 238 NLIQEPSAEAH---AARPDALDEPQHAVMVCKKILHTFGIKPRAWRAGLPALL 287 >gi|107028498|ref|YP_625593.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116686494|ref|YP_839741.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] gi|105897662|gb|ABF80620.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia AU 1054] gi|116652209|gb|ABK12848.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia HI2424] Length = 321 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + + ++DLL Sbjct: 13 VLLIGASGLLGRAVAACLARESSLTLLATIRNPQSAGAKLLALPPENIAELDLLDQPSLE 72 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P+ A +IN I A G + ISTDYV Sbjct: 73 RIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPARIGALATRYGAWTLGISTDYV 132 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR ++ ++ Sbjct: 133 FDG-KAAPYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIADWSESAVT 191 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A+ I + + S+ GI H ++ Sbjct: 192 SLVPAVVASSRPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLAGE--SVTGIRHWSS 249 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ D A+ I A G + + I PT A RP LD +++ Sbjct: 250 EE-PMTKYDIAQRI----AAALGIDASLTPITQ---PTDATPRPYDCHLDAARVRALGID 301 Query: 275 RISTWKEGVRNILVN 289 + + +R +L + Sbjct: 302 YATPFDTALRTVLRD 316 >gi|186683883|ref|YP_001867079.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] gi|186466335|gb|ACC82136.1| dTDP-4-dehydrorhamnose reductase [Nostoc punctiforme PCC 73102] Length = 290 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 28/300 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR--VGRP---------DIDLLKPKDFASFFLSFS 50 K L+ G +G + L + + EI + P +L ++ F Sbjct: 3 KLLITGASGFLGWHLCQLAKPEWEIYGTYLSHPLEIPGIKTLKANLTNFQELKRIFNDVK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P+ +I+ AA++ + + P+ + +IN + IA IPC + STD VFDGL Sbjct: 63 PEAVIHTAAHSQPNFCQTNPKESHAINVIASCNIAGLCADNSIPCAFTSTDLVFDGL-NA 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P+N+YG+ K E + + R ++ +F+ ++ + Sbjct: 122 PYQEIDAVCPVNLYGEQKAIAEAGMLERYPLTAVCRMPLMFGAATPTAKSFIQPFIQTLQ 181 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +E+++ D+F TP S A+ ++ + GI H+ +S DF + Sbjct: 182 AEKELNLFIDEFRTPVSGTTAAKGLLLALEKV--------NGIIHLGGKE-RLSRYDFGK 232 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + P +K+ + A RPA LD SK + + KE ++N++ Sbjct: 233 ILVE---VFQLPTTKLKSCRQEDVKMAAPRPADVSLDSSKAF-ALGYQPLSLKEELQNLI 288 >gi|291242991|ref|XP_002741389.1| PREDICTED: methionine adenosyltransferase II, beta-like [Saccoglossus kowalevskii] Length = 298 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 22/300 (7%) Query: 2 KCLVIGNNGQIAQ-SLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 + L+ G +G + + L E++ + +D+ + + F P V Sbjct: 3 RVLITGASGLLGRPVLKEFTNASWEVLGLAFSRATGSLKKVDITDEEQVRNVMKEFKPSV 62 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 +++ AA D E + E+ +N + IA+ G +YISTDYVFDG P Sbjct: 63 VVHSAAERRPDIVEKQEEVTKKLNVDTTAMIARLCGEFGAFMLYISTDYVFDG-KNAPYQ 121 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAK----ER 169 + NPLN YG+SKL GE+ + ILR +Y ++ L + Sbjct: 122 VDAQPNPLNKYGRSKLDGEKATSDNLTESAILRIPILYGEVEKLSESAVTILFQAVQDTN 181 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ Q PT IA I ++A ++ D S++GIFH +++ ++ A Sbjct: 182 KPATMCDYQKRYPTHVNDIAVIIRKLAEKRLQ--DPSIKGIFHYSSNE-LMTKYSMA--- 235 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN-IRISTWKEGVRNILV 288 + P + + K+ RP LD ++L + + +KEG++ L Sbjct: 236 MTMAEIFNIPSQHI--VADKEPSKGTPRPYDVHLDSTRLQSIGITTEQTPFKEGIQKCLK 293 >gi|307595552|ref|YP_003901869.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM 14429] gi|307550753|gb|ADN50818.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta distributa DSM 14429] Length = 295 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 72/303 (23%), Positives = 119/303 (39%), Gaps = 30/303 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR-----------VGRPDIDLLKPKDFASFFLSF 49 M L+ G + + V E+I V D+ + + Sbjct: 1 MIVLITGVSSSPGYKTAISLVNKYEVIGTYNEHPINIPGVTVVKADITRDSA--RLINDY 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PDV+I+ AA VD+ E++ E+ + +N + + AA G Y+STDYVFDG R Sbjct: 59 KPDVVIHMAAIGNVDQCEEQLELCYRVNVVASRDLLTAAYRSGSAIYYLSTDYVFDG-ER 117 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAK 167 E P+N YG +KL EE + + I+R AW+Y +NF +++ Sbjct: 118 GMYSEDDAPRPVNYYGLTKLMAEEITRALGGS--IIRVAWIYGTGPGRANFGKTVVEKLM 175 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ + DQ+ +PT I A +++ D GI H+ G +S +FA+ Sbjct: 176 RGEVVTAITDQWSSPTLNTIIGEAFVKLL-------DMRFSGIIHVV--GPRLSRYEFAK 226 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G + I KA RP S L + I ++ + Sbjct: 227 AI---ARHFGFNEELIKPIKLSDVNYKARRPRDSSLSNKRAIELLGIPLNDIDHALSIFR 283 Query: 288 VNI 290 + Sbjct: 284 KEL 286 >gi|227826955|ref|YP_002828734.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|229584126|ref|YP_002842627.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238619098|ref|YP_002913923.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] gi|227458750|gb|ACP37436.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.14.25] gi|228019175|gb|ACP54582.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.27] gi|238380167|gb|ACR41255.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus M.16.4] Length = 275 Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 140/295 (47%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI------DLLKPKDFASFFLSFSPDV 53 M+ ++IG +GQ+ LS + E+I+ ++ DL F + P++ Sbjct: 1 MRIMIIGASGQLGLELSRKLS-NYELIKTFALHELSEGLRLDLTDYLSLEDFIIKKKPEI 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VD+ E E E AF INAE I +A+ I I ISTDYVFDG Sbjct: 60 IINAAALTDVDRCEVEREKAFKINAEAVKHIVRASRVIEAYLIQISTDYVFDGNKGL-YK 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG +KL GE +SY ++ +I+RT+ V+ F + + + KE +E+ Sbjct: 119 EDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVF--RNKGFPVYVYKNLKEGKEVL 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 F +P SA ++A AI ++ GI ++ G +S D A+ I E Sbjct: 176 AFK-GFYSPISATKLAEAINELVTY-------KKTGIINIA--GERISRYDLAQKI-KEL 224 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI A RP S LD SK +I + E ++++++ Sbjct: 225 YNLSGKVIEVDRIE----GWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKHMVI 275 >gi|86134015|ref|ZP_01052597.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152] gi|85820878|gb|EAQ42025.1| dTDP-4-dehydrorhamnose reductase [Polaribacter sp. MED152] Length = 299 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 31/304 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD---VEIIRVGRP------------DIDLLKPKDFASFF 46 K ++ G+NG + QSL ++ +++ ++ R ID+ Sbjct: 3 KIVITGSNGLLGQSLLNLLLKENDKYDVYGFSRGVNRSGRNDFQYISIDITNKSQLTEEL 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 L PD IIN AA T VD E++ +N E G +A + I+ISTD++FDG Sbjct: 63 LKIKPDYIINTAAMTQVDACENDKAKCDILNVEVVGWLAVICQELSAHLIHISTDFIFDG 122 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----LLSM 162 E NPL+ YG SKL E+ + NY ILRT VY +L + Sbjct: 123 KK-GWYKEIDEPNPLSYYGLSKLKSEQVLEKSNINYTILRTILVYGKVFDMSRSNIVLWV 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + +REI++V DQ+ TPT +A A + D + GIF++++ +S Sbjct: 182 KESLENKREITIVDDQYRTPTYVEDLALACKI-------SMDKNATGIFNISSSE-LLSI 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D A+ I +A S + I T A+RP + D SK N T+K+ Sbjct: 234 FDIAKQI---AAVFNLDDSYIKSISTATLNQTANRPIKTGFDLSKTNKELNFYPKTFKDD 290 Query: 283 VRNI 286 ++ Sbjct: 291 LQRF 294 >gi|294055959|ref|YP_003549617.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM 45221] gi|293615292|gb|ADE55447.1| dTDP-4-dehydrorhamnose reductase [Coraliomargarita akajimensis DSM 45221] Length = 301 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 27/303 (8%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDI------------DLLKPKDFASFFL 47 MK LV G G + + L + + E+I + + D + L Sbjct: 1 MKILVTGATGLLGNAYLDAATRRSHELIALSHSQVVQHPAVVRNEQIDGTDLDSLTALCL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PDVI+N AA + + P++A IN +A+ + +G ++ISTD VFDG Sbjct: 61 EIWPDVIVNCAAISNPASVDANPQLAEKINVALPRHLAQISTHLGARLLHISTDMVFDGH 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT-NNYVILRTAWVYSIFGSNFLLSMLRL- 165 S P ++YG++KL E +V + + V+LR + S +L Sbjct: 121 SAEAYRSTDMPCPTSLYGQTKLMAEREVLEHNSEDPVVLRIPILMGNSPSGARSLHEKLF 180 Query: 166 --AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 ++ + CD+ P SA +A +++++ L GIFH + +S Sbjct: 181 AAIRKGERPKLFCDEIRQPCSAGNVADVLVELSER------RDLHGIFHWAGNE-ALSRF 233 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + + I P V + P A+RP+ + + R ++ + Sbjct: 234 EIGQRILKHFD---LPLDMVESVVKGDNPDFANRPSNLTFNLDPIVGKLKTRPIDFEAQL 290 Query: 284 RNI 286 + Sbjct: 291 EEL 293 >gi|242063580|ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor] gi|241932910|gb|EES06055.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor] Length = 325 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 41/317 (12%) Query: 2 KCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPDI-----------------DLLKPKDF 42 + LV+G +G + Q L + +++ DL Sbjct: 13 RVLVVGGSGYLGQHLLAASSAADRLDVAFTHHSPAPPQPLLDALPSVRAFRADLRSGDGL 72 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYI 98 + SF P V++N AA + E +P A + N ++ S G I++ Sbjct: 73 EAISASFGQPHVVVNCAAMSVPRACEMDPPAAMATNV--PSSLVNWLLSFGNEDSLLIHL 130 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 131 STDQVYEGVK-SFYKEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYGPQTISP 189 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + + + + +++ D+F P + I+ + + N + + Sbjct: 190 VAKSLPIQWIDGVLSQGQQVEFFNDEFRCPVYVKDMVDVILSLTKTWLSNGEK----VQV 245 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + + RG + + P +D +KL Sbjct: 246 LLNVGGPDRVSRLQMAESV---AVVRGYDPRIIKSVSASSVNRGVASPPDISMDITKLTQ 302 Query: 271 THNIRISTWKEGVRNIL 287 I+ ++++GVR+ L Sbjct: 303 ILGIKPISFRDGVRSTL 319 >gi|229578392|ref|YP_002836790.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|229582800|ref|YP_002841199.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] gi|228009106|gb|ACP44868.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.G.57.14] gi|228013516|gb|ACP49277.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus Y.N.15.51] Length = 275 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 91/295 (30%), Positives = 140/295 (47%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI------DLLKPKDFASFFLSFSPDV 53 M+ ++IG +GQ+ LS + E+I+ ++ DL F + P++ Sbjct: 1 MRIMIIGASGQLGLELSRKLS-NYELIKTFALHELSEGLRLDLTDYLSLEDFIIKKKPEI 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG Sbjct: 60 IINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDGNKGL-YK 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG +KL GE +SY ++ +I+RT+ V+ F + + + KE +E+ Sbjct: 119 EDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVF--RNKGFPVYVYKNLKEGKEVL 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 F +P SA ++A AI ++ GI ++ G +S D A+ I E Sbjct: 176 AFK-GFYSPISATKLAEAINELVTY-------KKTGIINIA--GERISRYDLAQKI-KEL 224 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI A RP S LD SK +I + E ++++++ Sbjct: 225 YNLSGKVIEVDRIE----GWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKHMVI 275 >gi|209522781|ref|ZP_03271339.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] gi|209496830|gb|EDZ97127.1| dTDP-4-dehydrorhamnose reductase [Arthrospira maxima CS-328] Length = 293 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 115/291 (39%), Gaps = 27/291 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI----------DLLKPKDFASFFLSFS 50 K LV G +G + ++ + + E+ + DL D + Sbjct: 4 KLLVTGASGFLGWNICQVAKSEWEVYGTYNSSPVTDSGVKFIKTDLTVLGDLKQVWEEIK 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + E+ P+I+ IN AG +A + GIP ++ STD VFDGL Sbjct: 64 PDAVIHAAAASKPNFCEENPDISHKINVVAAGDMASLCGAAGIPYVFTSTDLVFDGL-NP 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P+N YG K+ E ++ + I R +Y I G +F+ ++ K Sbjct: 123 PYRETDLVCPINTYGGQKVKAEGEILARYPKAAICRMPLMYGIASPHGGSFIQGFIKTLK 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +++ D+F TP S AR ++ + GI H+ +S +F Sbjct: 183 SGNCLNLFEDEFRTPVSGTTAARGLLLAIEKKV-------NGILHL-GGKQRISRYEFG- 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + P ++ + + A R + LD S+ + + Sbjct: 234 --LLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLDSSQAFD-LGYEPPS 281 >gi|48477380|ref|YP_023086.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Picrophilus torridus DSM 9790] gi|48430028|gb|AAT42893.1| dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Picrophilus torridus DSM 9790] Length = 269 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 21/288 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++GQ+ L ++ D E+I++ D+D K L +PD+IIN AA T Sbjct: 3 KILIFGSSGQLGSQLINLLKDDYELIKISHKDLDFNKFYLIEDIILKNNPDIIINCAALT 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD+ E A+++NA I + I ISTDYVF+G++ E +P+ Sbjct: 63 DVDRCEIYKNEAYNVNAGAVRHIIRPLKVTESYFINISTDYVFNGITGN-YREDDLPDPV 121 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 N YG +KL G+ SY +N +I+RT+ V+ F + + + E + ++ + + + Sbjct: 122 NYYGLTKLLGDIYANSY-DNTLIIRTSGVF--LNKGFPVFVYKNLMENKRVTAIP-GYYS 177 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 P SA +A AI I + GI ++ + +S D A I Sbjct: 178 PISAFNLAMAIKDII-------PLNRTGILNIAGN--KISRYDLALRISEMYNLNKNIDE 228 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 KA RP S L+ + N ++++++ Sbjct: 229 NNIE-------LKAKRPFDSSLNIERAKKLINFNFYDIDINLKHMVIK 269 >gi|209520653|ref|ZP_03269406.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] gi|209498936|gb|EDZ99038.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. H160] Length = 307 Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 117/304 (38%), Gaps = 27/304 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEII--RVGRPD-----IDLLKPKDFASFFLSFSPD 52 K +VIG +G + ++L+ + +I+ RP +D+ F PD Sbjct: 3 KVVVIGGSGLLGRALNDELARHDGWQIVTTAFSRPSRQMVALDVRDSLAVERFIEHVKPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + IA+AA+ G + ISTDYVFDG P Sbjct: 63 AVVIAAAERRPDVCERDPALARALNVDAVRTIARAANRHGAWTLSISTDYVFDGT-HPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL------- 165 S PLN YG+SKL GE + + +LR +Y S ++ L Sbjct: 122 RHDSTPAPLNAYGQSKLEGERALIETADRGCVLRLPLLYGPIVSWPESAVTSLVPAIAAS 181 Query: 166 -AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 A + + ++ PT +A I Q+ ++ GI + D P+S + Sbjct: 182 AASDGQTATMDAWAIRYPTFTPDVAVVIRQMLERHARGE--TISGIVQWSGDE-PMSKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A + + + RP L ++L R + + + Sbjct: 239 IAVRLAAALQLNAHLTPQRSPTDST------PRPHNCHLASTRLEEFGIGRRTPFDMAIG 292 Query: 285 NILV 288 +L Sbjct: 293 QVLA 296 >gi|323476572|gb|ADX81810.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus HVE10/4] Length = 275 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 139/295 (47%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI------DLLKPKDFASFFLSFSPDV 53 M+ ++IG +GQ+ LS + E+I+ ++ DL F + P++ Sbjct: 1 MRIMIIGASGQLGLELSRKLS-NYELIKTFALHELSEGLRLDLTDYLSLEDFIIKKKPEI 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VDK E E E AF INAE I +A+ I I ISTDYVFDG Sbjct: 60 IINAAALTDVDKCEVEREKAFKINAEAVKHIVRASRVIEAYLIQISTDYVFDGNEGL-YK 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG +KL GE +SY ++ +I+RT+ V+ F + + + KE +E+ Sbjct: 119 EDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVF--RNKGFPVYVYKNLKEGKEVL 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 F +P SA ++A AI ++ GI ++ G +S D A+ I E Sbjct: 176 AFK-GFYSPISATKLAEAINELVTY-------KKTGIINIA--GERISRYDLAQRI-KEL 224 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI A RP S LD SK +I + E ++ I++ Sbjct: 225 YNLSGKVIEVDRIE----GWIAKRPFDSSLDISKAKKLVSIDFYSTDENLKYIVI 275 >gi|257228947|gb|ACV52995.1| putative CDP-L-6-deoxy-altrose synthase [Yersinia pseudotuberculosis] Length = 288 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 18/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVIINPA 58 M + G+NG I +L+ ++ + I+R+ RPD L + + ++ V+++ A Sbjct: 1 MTIAITGSNGVIGSTLADFFLKCNYNILRLQRPDYKLGTQLSELVKLLDKYNVSVLVHCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A T V+ E P+IA+S N +++A + I +Y+S+ ++ P +EF Sbjct: 61 ANTNVEYCELHPDIAYSDNYILTEFLSRACEVNKIKFVYLSSTGIYGDGKSRPYNEFDSV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKE-RREISV 174 +P + +SK GE+ V++ ++Y+I+RT WV+ + NF+ + +R AK+ E+ Sbjct: 121 SPTTHHHRSKFLGEQSVSNMVSDYLIIRTGWVFGGDWLLSKNFVANRIREAKQSNGEVKS 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 QFG PT A + I ++ I G+F+ + G V+ ++ I S Sbjct: 181 DASQFGNPTYAYDLCHHIFKLIKENI-------CGVFNCV-NQGAVNRYEYVSEIIKLS- 231 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + A KL + + WKE +++ L Sbjct: 232 ---NLAVVVLPTDNSFFSRVAKVSLNESAVNYKLKQYNLDSMPHWKESLQSYL 281 >gi|115374682|ref|ZP_01461960.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|310820809|ref|YP_003953167.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|115368350|gb|EAU67307.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|309393881|gb|ADO71340.1| dTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] Length = 303 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 27/301 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP-----------DIDLLKPKDFASFFLS 48 M+ +V G+NG + + ++ + E++ +GR +DL D + S Sbjct: 1 MRFVVTGSNGLVGSRVCALLEKAGHEVVGLGRGARRTGGAHRYIPVDLTLEADVLTAIES 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P+ II+PA+ T VD E PE+A++ N A A+AK A +G +++STDYVFDG Sbjct: 61 AAPEAIIHPASMTEVDACERAPELAYAANVTAAMAVAKGARKVGAHLVHVSTDYVFDGD- 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRL 165 + P DE + NP +Y +K GE+ S+ I RTA VY NF ++ Sbjct: 120 QGPYDEEARANPRGVYALTKHMGEQAAKSFVPGCAIARTAVVYGWPPAGRPNFGAWLVGA 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 ++++ + + DQF +P+ A +A ++++ + G+++ T G ++ F Sbjct: 180 LEKQQTVKLFEDQFVSPSLADSVAAMLVELGERKLG-------GLWN-TCGGEVMNRVSF 231 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 G + + + RP +S L K + E ++ Sbjct: 232 GRA---LCEVFGFDQNLLVPSRMADLKLPSPRPLHSGLKADKARAQLVAKPLALTESLQR 288 Query: 286 I 286 Sbjct: 289 F 289 >gi|158337932|ref|YP_001519108.1| RmlD substrate binding domain-containing protein [Acaryochloris marina MBIC11017] gi|158308173|gb|ABW29790.1| RmlD substrate binding domain [Acaryochloris marina MBIC11017] Length = 299 Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 114/299 (38%), Gaps = 27/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-----------DIDLLKPKDFASFFLSFS 50 K L+ G +G + L + ++ +DL + Sbjct: 12 KLLITGASGFLGWYLCQVAQSSWQVFGTAYSHAVEIPGCSVVTVDLRDFASLKQVLQTVQ 71 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + EP+ +IN E + +A IP +++STD VFDG Sbjct: 72 PDAVIHAAAQARPHVCQAEPQSTHAINVEASWTLADLCGESQIPLLFVSTDLVFDG-QDP 130 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAKE 168 P E +P+N YG+ K+ E+ + + VI R ++ + ++F+ M++ + Sbjct: 131 PYQESDLVSPINTYGEQKVKAEQGMVERYPSTVIARMPLMFGVTPHAASFIQPMIQNLEA 190 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + + D+F TP S L AR I+ G H+ +S + + Sbjct: 191 GIALQLFEDEFRTPVSGLDAARGILLALAK--------GEGYIHLGGKE-RLSRFEMGQ- 240 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 G P + + RPA LD S LA + + + + +R +L Sbjct: 241 --QLVDCLGYPPTLLTGCSQTDVSLSTPRPADVSLDSS-LAYSLGYAPNLFGQALRQML 296 >gi|159904976|ref|YP_001548638.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6] gi|159886469|gb|ABX01406.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C6] Length = 285 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 77/282 (27%), Positives = 117/282 (41%), Gaps = 34/282 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI---IR-----------VGRPDIDLLKPKDFASFFL 47 K LVIG G + + + E I + + +D+ + Sbjct: 3 KVLVIGL-GMVGYEIVRKYFETGEYKISIASRSENGFFRGVLDKHILDVTNEQKVQKLIY 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 SPD ++N AA T VD E E E+A+ NA A I K G +ISTDYVFDG+ Sbjct: 62 DISPDFVVNTAAMTNVDLCEKEKELAYKSNALLAEYIGKVCKKTGSKLCHISTDYVFDGV 121 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNFLLSMLR 164 E P NP+N YG +K GE + + V + T + +S NF +L Sbjct: 122 KGN-YVETDPINPINYYGFTKAEGERLLNEIDYDNKSIVRISTPYGFSPVKLNFYTWVLE 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 K + I++V DQ+ T T+ L ++ +++I + L GI H +S + Sbjct: 181 SLKCEKPINIVTDQYTTSTNLLDLSEFMLKI-------QNDDLSGIIHF-GGSEKLSRYE 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 FA I S + + I + + A RP +D S Sbjct: 233 FALKI---SEKYNLNDKLINPIKSSELNWIAKRP----MDTS 267 >gi|257228929|gb|ACV52978.1| putative CDP-L-6-deoxy-altrose synthase [Yersinia pseudotuberculosis] Length = 288 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 18/293 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDL-LKPKDFASFFLSFSPDVIINPA 58 M + G+NG I +L+ ++ + I+R+ RPD L + + ++ V+++ A Sbjct: 1 MTIAITGSNGVIGSTLADFFLKCNYNILRLQRPDYKLGTQLSELVRLLDKYNVSVLVHCA 60 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 A T V+ E P+IA+S N +++A + I +Y+S+ ++ P EF Sbjct: 61 ANTNVEYCELHPDIAYSDNYILTEFLSRACEVNKIKFVYLSSTGIYGDGKSRPYKEFDSV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKE-RREISV 174 +P + +SK GE+ V++ ++Y+I+RT WV+ + NF+ + +R AK+ E+ Sbjct: 121 SPTTHHHRSKFLGEQSVSNMVSDYLIIRTGWVFGGDWLLSKNFVANRIREAKQSNGEVKS 180 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 QFG PT A + I ++ I G+F+ + G V+ ++ I S Sbjct: 181 DTSQFGNPTYAYDLCHHIFKLIKENI-------CGVFNCV-NQGAVNRYEYVSEIIKLS- 231 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 V + + A KL + + WKE +++ L Sbjct: 232 ---NLAVVVLPTDNRFFSRVAKVSLNESAVNYKLKQYNLDSMPHWKESLQSYL 281 >gi|281204543|gb|EFA78738.1| methionine adenosyltransferase regulatory beta subunit [Polysphondylium pallidum PN500] Length = 305 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 28/307 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-----DVEIIRVGRPD----------IDLLKPKDFASFF 46 + LV G++G + ++ +V + R + +D+ Sbjct: 6 RVLVTGSSGLLGRAFMRTFAGCADKFNVLGLAFSRYEKYKNQFPLEHVDINDRVQLTDIV 65 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 F PDVII+ AA D E++ + +N + I + A ++G + IS+DYVFDG Sbjct: 66 NRFKPDVIIHSAAERRPDICENDKDRVIQLNVKSTEFINELAMNVGAYLVLISSDYVFDG 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P + TNPL+ YG++K A E V +ILR +Y + ++ +A Sbjct: 126 -ENAPYKTDAQTNPLSFYGETKRASE-VVCLKNPRNIILRVPVLYGQVETLSESAVTVVA 183 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 K+ + + Q PT +A+ + + EN D S+ GI+H T + ++ Sbjct: 184 EQIKKNANVEIDNWQLRYPTLVDDVAKCTLMLICKKKENGD-SISGIYHFTDNQ-KLTKY 241 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-WKEG 282 + A + G S++ +K P+ A RP + LD + + + ST ++ Sbjct: 242 EMA---VVMAKVLGIDASQIKPGNSK--PSGAPRPYNAQLDTTATSQLIGVLPSTNFETA 296 Query: 283 VRNILVN 289 + +IL N Sbjct: 297 ITSILNN 303 >gi|257077379|ref|ZP_05571740.1| dTDP-4-dehydrorhamnose reductase [Ferroplasma acidarmanus fer1] Length = 275 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 25/275 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+IG+ GQ+ ++LSS+ I + IDL + + +S D +IN AA Sbjct: 1 MKTLIIGSGGQLGKALSSILENS---IPLSHDVIDLRNVNNIENTLDKYSFDTVINCAAM 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T+VDK E E + A+ IN I I++STDYVF+G E + P Sbjct: 58 TSVDKCEIEIDSAYYINGLSMKYIGDYCRENNKYLIHVSTDYVFNGNKGN-YTEDDISYP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N YG SKL G+ SY N +I+RT+ VY +NF L ++ + I+ D + Sbjct: 117 INYYGLSKLIGDTYANSYQ-NSLIIRTSGVYGA-KNNFPLYVIDRLRNNSGINAF-DNYY 173 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 +P +A +A +I ++ D L GI +++ G +S +FA I + + G Sbjct: 174 SPVNANVLAHSISKLL-------DLKLTGILNVS--GPRLSRYEFALKI---ADKFGLNK 221 Query: 241 SKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTH 272 + + + Y + A RP S L+ K Sbjct: 222 ALINK---TDYNSVKFIAKRPYDSSLNNEKAKALL 253 >gi|227889830|ref|ZP_04007635.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii ATCC 33200] gi|227849694|gb|EEJ59780.1| possible dTDP-4-dehydrorhamnose reductase [Lactobacillus johnsonii ATCC 33200] Length = 213 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 109/210 (51%), Gaps = 28/210 (13%) Query: 95 CIYISTDYVFDGLSRTPIDEFSP-TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +Y+STDYVFDG TP + PLN+YG++KL GEE VA+ + Y I+R AWV+ + Sbjct: 1 MVYLSTDYVFDGQGTTPWEPDFKGYKPLNVYGETKLGGEEAVANTLDKYFIVRIAWVFGV 60 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 GSNF+ +ML++ E+ VV DQ GTPT +AR ++ + +T G +H Sbjct: 61 NGSNFIKTMLKVGSNHDEVKVVSDQVGTPTYTFDLARLLVDMI-------ETDKYGYYHA 113 Query: 214 TADG---------------GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAHR 257 T G +SW DF + I+ ++ G +KV + T++Y +KA R Sbjct: 114 TNAELPASEGNHDENGTKTGYISWYDFTKEIYRQA----GYKTKVTPVTTEEYGLSKAVR 169 Query: 258 PAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P S LD SKL + TW + + L Sbjct: 170 PFNSRLDKSKLEENGFKPLPTWPDAISRYL 199 >gi|302780343|ref|XP_002971946.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii] gi|300160245|gb|EFJ26863.1| hypothetical protein SELMODRAFT_172571 [Selaginella moellendorffii] Length = 309 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 124/312 (39%), Gaps = 30/312 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPD--------------IDLLKPKDFAS 44 M LV+G +G + L E I +DL + Sbjct: 1 MAVLVVGGSGYVGLHLLKALAARYSPENIAYTYNSHPPPLSEQLGVGYRVDLTTGQGLQD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPCIYISTDY 102 LS P V++N AA + E+ P+ A ++N A +A ++ STD Sbjct: 61 LALSVHPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVHFSTDQ 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------S 156 V++G+ + E T P+N+YG SK+ E + S NY ILR++ +Y Sbjct: 121 VYEGIKQ-FYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVHVQKP 179 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + M R+ + D++ P + + + + L E S +++ + ++ Sbjct: 180 LPVQWMDMALSARKPVDFFHDEYRCPIFIGDVVKVVALLI-TLSEQSGGAMQLVLNLGGP 238 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 +S A+ A+ + + +G S + ++ PA +D KL +T I + Sbjct: 239 E-RLSRAEMAQVV---ARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICL 294 Query: 277 STWKEGVRNILV 288 + + EGVR L+ Sbjct: 295 TPFDEGVRQTLM 306 >gi|254250399|ref|ZP_04943718.1| NAD dependent epimerase/dehydratase family protein [Burkholderia cenocepacia PC184] gi|124879533|gb|EAY66889.1| NAD dependent epimerase/dehydratase family protein [Burkholderia cenocepacia PC184] Length = 321 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 124/315 (39%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + + ++D+L Sbjct: 13 VLLIGASGLLGRAVAACLARESSLTLLATIRNPQSAGAKLLALPPENIAELDVLDQPSLE 72 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P+ A +IN I A G + ISTDYV Sbjct: 73 RIFETHRPAAVILCAAERRPDVCERDPDAARAINVTAPARIGALATRYGAWTLGISTDYV 132 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR ++ ++ Sbjct: 133 FDG-KAAPYREDATPNPLNIYGRTKLEGEVALLAASPLSCVLRLPLLFGPIADWSESAVT 191 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A+ I + + S+ GI H + Sbjct: 192 SLVPAVVASSRPGADAVGMDAWAIRYPTWTPDVAQVIRDLTLRHLAGE--SVTGIRHWSG 249 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ D A+ I A G + I PT A RP LD +++ Sbjct: 250 EE-PMTKYDIAQRI----AAALGIDASFTPITQ---PTDATPRPYDCHLDAARVRALGID 301 Query: 275 RISTWKEGVRNILVN 289 + + +R +L + Sbjct: 302 YATPFDTALRTVLRD 316 >gi|196006161|ref|XP_002112947.1| hypothetical protein TRIADDRAFT_25365 [Trichoplax adhaerens] gi|190584988|gb|EDV25057.1| hypothetical protein TRIADDRAFT_25365 [Trichoplax adhaerens] Length = 305 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 113/302 (37%), Gaps = 23/302 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLSFSPD 52 K L+ G +G + +++ D VG +DL + F P Sbjct: 8 KVLITGASGLLGRAILKEFEVDGSWECVGLAFTRAKGNLRKVDLKDVGAVRALVSEFRPT 67 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VII+ AA D E + E + +N + +A A +YIST+ VFDG P Sbjct: 68 VIIHSAAERRPDVVEQQLEASRQLNVVVSQNLASIAKEFNCFLLYISTNGVFDG-KSPPY 126 Query: 113 DEFSPTNPLNIYGKSKLAGEEK-VASYTNNYVILRTAWVYSIFGSNFLLSMLRL----AK 167 NP N Y K GE+ + + + +LR ++Y + S L Sbjct: 127 KPSDVPNPSNSYCIFKFEGEKATLQTLPKSSGVLRVPYLYGQVENLAECSCTALFQAVLN 186 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + SV PT IA I QI + S+ RGI+H + + + Sbjct: 187 NTKSKSVTDYGMRYPTLVDDIAIVIRQICEKAL--SENDFRGIWHWSGSEALTKY----Q 240 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + +S + + PT A R S LDCS L + R + ++ G++ L Sbjct: 241 MTKIMAEVFNLDFSHIKP--ASEPPTGAKRSNNSQLDCSDLMKLNFGRHTPFRVGIQECL 298 Query: 288 VN 289 N Sbjct: 299 RN 300 >gi|170735094|ref|YP_001774208.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] gi|169821132|gb|ACA95713.1| dTDP-4-dehydrorhamnose reductase [Burkholderia cenocepacia MC0-3] Length = 321 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + + ++D+L Sbjct: 13 VLLIGASGLLGRAVAACLARESSLTLLATIRNPQSAGTKLLALPPENIAELDVLDQSSLE 72 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN I A G + ISTDYV Sbjct: 73 RIFETHRPAAVILCAAERRPDVCERDPAAARAINVTAPARIGALATRYGAWTLGISTDYV 132 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR ++ ++ Sbjct: 133 FDG-KAAPYSENATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIADWSESAVT 191 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A+ I + L + S+ GI H + Sbjct: 192 SLVPAVVASSRPGADAVGMDAWAIRYPTWTPDVAQVIRDLT--LCHLAGDSVTGIRHWSG 249 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ D A+ I A G + + I PT A RP LD +++ Sbjct: 250 EE-PMTKYDIAQRI----AAALGIDASLTPITQ---PTDATPRPYDCHLDAARVRALGID 301 Query: 275 RISTWKEGVRNILVN 289 + + +R +L + Sbjct: 302 YATPFDTALRTVLRD 316 >gi|320332925|ref|YP_004169636.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] gi|319754214|gb|ADV65971.1| dTDP-4-dehydrorhamnose reductase [Deinococcus maricopensis DSM 21211] Length = 721 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 62/277 (22%), Positives = 112/277 (40%), Gaps = 19/277 (6%) Query: 16 LSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAF 74 + +C + + + D+DL P ++N A Y +D+AE E + Sbjct: 458 VQRLCAERGLSARLLRSSDVDLADASAVQHLLTDLRPWAVVNAAGYGGIDEAEVHHEAFW 517 Query: 75 SINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEK 134 A G +A+A ++ G+ + S+D VF G +P E +P+N YG+++ E + Sbjct: 518 RHTAVGLAVLARACEANGVHLLTFSSDQVFGGDRTSPYQEHDAAHPVNRYGRARREAEWQ 577 Query: 135 VASYTNNYVILR-TAWVYSIFGSNFLLSM-LRLAKERREISVVCDQFGTPTSALQIARAI 192 V +Y +++R +A ++ G LL M LR + + + +PT + Sbjct: 578 VLAYHPGTLVVRSSAALFGASGRQDLLGMALRTLRAGGTLFMDDQHRFSPTYLPDLVHTS 637 Query: 193 IQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 + + + RG +H+T + G SWAD + G P V + T+Q Sbjct: 638 LDLLID-------GERGTWHLT-NAGETSWADLTRM---LADATGAPADAVQAVPTEQLG 686 Query: 253 TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 A RP YS + + + + L N Sbjct: 687 WVAPRPRYSAMSSGR-----GNLMPKLSHALERYLAN 718 >gi|284996982|ref|YP_003418749.1| hypothetical protein LD85_0643 [Sulfolobus islandicus L.D.8.5] gi|284444877|gb|ADB86379.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5] Length = 314 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI------DLLKPKDFASFFLSFSPDV 53 M+ ++IG +GQ+ LS + E+I+ ++ DL F + P++ Sbjct: 40 MRIMIIGASGQLGLELSRKLS-NYELIKTFALHELSEGLRLDLTDYLSLEDFIIKKKPEI 98 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG Sbjct: 99 IINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDGNKGL-YK 157 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG +KL GE +SY ++ +I+RT+ V+ F + + + KE +E+ Sbjct: 158 EDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVF--RNKGFPVYVYKNLKEGKEVL 214 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 F +P SA ++A AI ++ GI ++ G +S D A+ I E Sbjct: 215 AFK-GFYSPISATKLAEAINELVTY-------KKTGIINIA--GERISRYDLAQKI-KEL 263 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI A RP S LD K +I + E ++++++ Sbjct: 264 YNLSGKVIEVDRIE----GWIAKRPFDSSLDILKAKKLVSIDFYSTDENLKHMVI 314 >gi|302791097|ref|XP_002977315.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii] gi|300154685|gb|EFJ21319.1| hypothetical protein SELMODRAFT_151824 [Selaginella moellendorffii] Length = 309 Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 69/312 (22%), Positives = 124/312 (39%), Gaps = 30/312 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVGRPD--------------IDLLKPKDFAS 44 M LV+G +G + L E I +DL + Sbjct: 1 MAVLVVGGSGYVGLHLLKALAARYSPENIAYTYNSHPPPLSEQLGVGYRVDLTTGQGLQD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPCIYISTDY 102 LS P V++N AA + E+ P+ A ++N A +A ++ STD Sbjct: 61 LALSVHPRVVVNCAAMSVPRDCEENPQKAMAVNVPRALLRYLASLQTGAPPLLVHFSTDQ 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------S 156 V++G+ + E T P+N+YG SK+ E + S NY ILR++ +Y Sbjct: 121 VYEGIKQ-FYVETDETKPVNVYGLSKVEAEFLIRSTWRNYAILRSSIIYGPQPVVHVQKP 179 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + M RR + D++ P + + + + L E S +++ + ++ Sbjct: 180 LPVQWMDMALSARRPVDFFHDEYRCPIFIGDVVKVVALLI-TLSEQSGGAMQLVLNLGGP 238 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 +S A+ A+ + + +G S + ++ PA +D KL +T I + Sbjct: 239 E-RLSRAEMAQVV---ARVKGYHPSLINQVPASSVDRGVASPADISMDVEKLRSTLGICL 294 Query: 277 STWKEGVRNILV 288 + + EGVR L+ Sbjct: 295 TPFDEGVRQTLM 306 >gi|227829947|ref|YP_002831726.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|227456394|gb|ACP35081.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] Length = 275 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 27/295 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI------DLLKPKDFASFFLSFSPDV 53 M+ ++IG +GQ+ LS + E+I+ ++ DL F + P++ Sbjct: 1 MRIMIIGASGQLGLELSRKLS-NYELIKTFALHELSEGLRLDLTDYLSLEDFIIKKKPEI 59 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 IIN AA T VD+ E E + AF INAE I +A+ I I ISTDYVFDG Sbjct: 60 IINAAALTDVDRCEVERDKAFKINAEAVRHIVRASRVIEAYLIQISTDYVFDGNKGL-YK 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREIS 173 E NP+N YG +KL GE +SY ++ +I+RT+ V+ F + + + KE +E+ Sbjct: 119 EDDLPNPINYYGLTKLLGENYASSY-DDTLIVRTSGVF--RNKGFPVYVYKNLKEGKEVL 175 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 F +P SA ++A AI ++ GI ++ G +S D A+ I E Sbjct: 176 AFK-GFYSPISATKLAEAINELVTY-------KKTGIINIA--GERISRYDLAQKI-KEL 224 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 G +V RI A RP S LD K +I + E ++++++ Sbjct: 225 YNLSGKVIEVDRIE----GWIAKRPFDSSLDILKAKKLVSIDFYSTDENLKHMVI 275 >gi|309274401|gb|ADO63823.1| putative dTDP-4-dehydrorhamnose reductase [Pseudomonas chloritidismutans] Length = 294 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 107/288 (37%), Gaps = 4/288 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ +++G + Q+L + ++ RP PDV++N A Y Sbjct: 3 MRLMLLGGGNALGQALIRLGAEEDIGFLAPRPPAQGWDAASLTQLLDDNRPDVVVNLAYY 62 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 ++ E A + +A+ + S+ VFDG T E P Sbjct: 63 YDWFQSGQPNEPALAAQERAVERLAELCQHHDFVLLQPSSYRVFDGARTTAYSEKDEVAP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 L+ G++ E+ V S +V+LR W+ L +L+ ++ I + D+ G Sbjct: 123 LDARGRALWRIEQSVRSLCPRHVLLRFGWLLDDSRDGVLGRVLQRLEQSEAILLADDRRG 182 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGP 239 PT AR I+ + L + L G +H A+ + E+ + R Sbjct: 183 NPTPVDDAARVILAVLKQL--DCQAPLWGTYHYGGHEASTPLL-VAQALLGEAGKYRDVT 239 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + A + L C K+ T I+ W+ G+ ++L Sbjct: 240 TANLTAVAHAACSDAAAEAQHGVLACKKIFTTFGIKPRAWRTGLPSLL 287 >gi|302039637|ref|YP_003799959.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] gi|300607701|emb|CBK44034.1| putative dTDP-4-dehydrorhamnose reductase [Candidatus Nitrospira defluvii] Length = 290 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 113/290 (38%), Gaps = 26/290 (8%) Query: 1 MK--CLVIGNNGQIAQSLS---SMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 MK L+ G G I L + + V R + D+ P + +P ++I Sbjct: 1 MKPTVLITGAGGLIGGYLVSTAARWAPQWNVHGVTRAETDVTDPMQVQELWRRSTPALVI 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + AA + E +P A IN E +A A IP I++STD VFDG E Sbjct: 61 HCAALSRTGACEQDPARARRINVEATERLAGLAR--DIPFIFLSTDQVFDGTK-GWYVES 117 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAKERREI 172 +PLN+YG++K E+ V + I+R A +F+ MLR A + ++ Sbjct: 118 DAVHPLNVYGQTKADAEQVVLE-NPAHSIVRIALTAGTSPTHDRSFVEDMLRAAAKGTKL 176 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 ++ D++ P A + RA+ + A + G++H+ W I Sbjct: 177 TLFTDEYRCPIPAGPLVRALWEFAAH-------PRSGLYHLGGSERLSRW-----EIGEL 224 Query: 233 SAER-GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A R + Y RP + K+ + R+ +++ Sbjct: 225 LARRYPELRPCIQPGSVADYHGP-LRPPDLSMRSDKMQVLLSFRLPGFRQ 273 >gi|159041989|ref|YP_001541241.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167] gi|157920824|gb|ABW02251.1| dTDP-4-dehydrorhamnose reductase [Caldivirga maquilingensis IC-167] Length = 288 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 77/289 (26%), Positives = 121/289 (41%), Gaps = 30/289 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-----------GRPDIDLLKPKDFASFFLSF 49 M LV G + + E+I V DL K + Sbjct: 1 MIILVTGVSSSPGYKTAVKLAGIHEVIGVYNEHPVNVPNATVVKADLTKDAS--RLINEY 58 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P+V+I+ AA VD+ ED+P++ + +N E + + + A +G Y+STDYVFDG R Sbjct: 59 KPNVVIHTAAVGNVDQCEDQPDLCYRVNVETSRILLREAYRVGSAIYYLSTDYVFDG-ER 117 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--SIFGSNFLLSMLRLAK 167 +E P+N YG SKL EE + + I+R AWVY NF +++ Sbjct: 118 GLYNEDDAPRPINYYGLSKLLAEEITRALGGS--IIRVAWVYGTGPGRVNFGRTVVEKLS 175 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ + DQ+ +PT I A++++ ++ G+ H+T G +S DFA+ Sbjct: 176 RGEVVNAIIDQWSSPTLNTIIGEAMLRLV-------ESRFTGVLHVT--GPRMSRFDFAK 226 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 I + V I KA RP S L + NI + Sbjct: 227 AI---ARYFKFNEDLVKPIRLSDVNYKARRPRDSSLSNKRALGILNIPL 272 >gi|88858284|ref|ZP_01132926.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] gi|88819901|gb|EAR29714.1| NAD dependent epimerase/dehydratase family protein [Pseudoalteromonas tunicata D2] Length = 296 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 110/288 (38%), Gaps = 23/288 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSPDVI 54 K ++ G +G + ++L + E+I ++L + F ++ P + Sbjct: 3 KIMITGASGLLGRALFNTFSDHFEVIGTAFSRASEPLVPLNLTDFRALEDFLITHKPHYL 62 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 I+ AA + + PE+ +N A+A + +IS+DYVFDG S P E Sbjct: 63 IHAAAERRPEVCLENPELTQQLNVSLPAALANLCHQHQVELFFISSDYVFDGTS-PPYAE 121 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF---LLSMLRLAKERRE 171 + PLN YG SK E+ V +Y + ++R +Y L + + Sbjct: 122 TAQPAPLNDYGISKYQAEQAVLAY-PQHNVVRIPVLYGAVEKIDESALTITWQQLIQSNA 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + PT IA+ + I L + G+FH++ D P + A Sbjct: 181 PKMDNWAVRYPTHVDDIAKTLKAIITQL---DKSERGGVFHIS-DTTPYTKFQLACA--- 233 Query: 232 ESAERGGPYSKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRIST 278 + G S++ + + P A RP L ++LA + Sbjct: 234 LADAFGYDKSQITAMDS---PVGQAARPQNCQLSDNRLAKKGILYQRD 278 >gi|187923382|ref|YP_001895024.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] gi|187714576|gb|ACD15800.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phytofirmans PsJN] Length = 306 Score = 189 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 115/304 (37%), Gaps = 27/304 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L Q D +++ G+ +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRALVDELAQQSDWQVVATAFSRPAPGKVSLDIRDARAVEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + +A AA+ G + ISTDYVFDG P Sbjct: 63 ALVIAAAERRPDVCEHDPALARALNVDAVRTLASAANRRGAWTLSISTDYVFDGT-HPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--------FLLSMLR 164 S PLN YG SKL GE + T+ +LR +Y S Sbjct: 122 QHDSVPAPLNAYGHSKLEGEHALTESTDLGCVLRLPLLYGPIVSWAESAVTSLVPAIAGS 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 A + + PT +A I Q+ + ++RGI + D P++ + Sbjct: 182 AAPGSKPAVMDAWAIRYPTFTPDVAFVIRQMLERHAQGD--AIRGIVQWSGDE-PMNKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 A + + + RP L S+L R + + +R Sbjct: 239 IAVRLAEALQLDAHLTPQATPTDST------PRPHNCHLASSRLEALGIGRRTPFDTAIR 292 Query: 285 NILV 288 +L Sbjct: 293 QVLA 296 >gi|172040149|ref|YP_001799863.1| hypothetical protein cur_0469 [Corynebacterium urealyticum DSM 7109] gi|171851453|emb|CAQ04429.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 392 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 140/321 (43%), Gaps = 41/321 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPDIDLLKPK-----DFASFFLSF--SPDVI 54 +V+G GQ+ +L + ++ +GR ++DL + V+ Sbjct: 76 IVVLGAGGQLGTALVAGLADHAAPVVALGRAELDLTASDEECATALRAAIEQAGGRDVVV 135 Query: 55 INPAAYTAVDKAEDEPEIA--FSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 IN AA+TAVD AED A +NA G +A+ A + G I++STDYVF G + P Sbjct: 136 INAAAWTAVDAAEDPANAAAVERVNATAPGMLAQVAAAQGAGFIHVSTDYVFSGEAGQPR 195 Query: 113 --DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAK 167 P+N YG++KLAGE V ++RTAWV+S +FL +M LA+ Sbjct: 196 AASPEDSPAPVNEYGRTKLAGERAVLDA--GGTVVRTAWVFSGPTGPGRDFLDTMAGLAE 253 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR------------------- 208 + VV DQ+G PT +A ++++A L Sbjct: 254 RGVDPKVVDDQWGRPTFTGHLAAGLVELAVTLWRQRRAGEHTQTSVPSSGGSGDDARTPE 313 Query: 209 --GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 + H T G +WA FA IF G ++V RI T +YPT A RP LD S Sbjct: 314 LPRLLHATGSGEVTTWAGFAAAIFD---ATGHDPARVSRIPTAEYPTPARRPVGVYLDTS 370 Query: 267 KLANTHNIRISTWKEGVRNIL 287 + W++G+R L Sbjct: 371 CWEAAGLSPLPAWQDGLRAAL 391 >gi|295676079|ref|YP_003604603.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] gi|295435922|gb|ADG15092.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1002] Length = 307 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 116/305 (38%), Gaps = 29/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEII----RVGRPD-----IDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L V+ RP +D+ F PD Sbjct: 3 KVAVIGGSGLLGRALIDELAGQVDWHIVSTAFSRPSPQMVRLDVRDSLAVERFIDHVVPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P A ++N + IA AA+ G + ISTDYVFDG P Sbjct: 63 AVVIAAAERRPDVCERDPAHARALNVDAVQMIASAANRHGAWTLSISTDYVFDG-KHPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL------- 165 S PLN YG+SKL GE + +LR +Y + ++ L Sbjct: 122 RHDSTPAPLNAYGQSKLEGERALIETAERGCVLRLPLLYGPIANWSESAVTSLVPAIAAS 181 Query: 166 -AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 A + + + PT +A I Q+ ++ GI + D P++ + Sbjct: 182 AAPDTQAAKMDAWAIRYPTFTPDVAVVIRQMLERHARGE--TISGIVQWSGDE-PMNKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + AE + + T PT A RP L S+L R + + + Sbjct: 239 IAVRV----AEALQLDAHLMPQHT---PTDATPRPHNCHLASSRLEALGLGRRTPFDTAI 291 Query: 284 RNILV 288 R +L Sbjct: 292 RRVLA 296 >gi|226504976|ref|NP_001150501.1| LOC100284132 [Zea mays] gi|195639658|gb|ACG39297.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Zea mays] Length = 350 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 40/317 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI-----------------DLLKPKDF 42 + LV+G +G + Q L + V +++ DL F Sbjct: 37 RVLVVGGSGYLGQHLLAASSTVDRLDVAFTHHSPAPPQPLLETLPSVRAFRADLRSGDGF 96 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI---PCIYI 98 + SF P V++N AA + E +P A + N ++ S G I++ Sbjct: 97 EAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGNDDSLLIHL 154 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 155 STDQVYEGVK-SFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQTISP 213 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + M + + +++ D+F P + I+ + + + Sbjct: 214 VAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKK---VQV 270 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + + RG S + + P +D +KL Sbjct: 271 LLNVGGPDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQ 327 Query: 271 THNIRISTWKEGVRNIL 287 I+ ++++GVR+ L Sbjct: 328 ILGIKPISFQDGVRSTL 344 >gi|124007540|ref|ZP_01692245.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134] gi|123987023|gb|EAY26779.1| dTDP-4-dehydrorhamnose reductase [Microscilla marina ATCC 23134] Length = 311 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 48/315 (15%) Query: 2 KCLVIGNNGQIAQS---------LSSMCVQDVEIIRVGR--------------PDIDLLK 38 K L+ G+N ++S VE++ R +D+ Sbjct: 3 KILITGSN----GLLGQKLQQLLITSPYNTTVEVLATSRGNNRCSITNANLRYQSMDITN 58 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---- 94 ++ + F PD +I+ AA T VD E + ++ + +N + +A + Sbjct: 59 REEVIATLTEFKPDAVIHTAAMTQVDDCETQRDLCWQLNVNSVEYLIEACQQLKQAGKAP 118 Query: 95 -CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 +++STD++FDG + P E + NP++ YG+SKLA E+ + + + I RT VY I Sbjct: 119 FLVHLSTDFIFDGAA-GPYHEEATANPVSYYGESKLAAEQALLASNIQWSIARTVLVYGI 177 Query: 154 FGSNF----LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + +L + + +E + I VV DQ+ TPT A +A +A D + G Sbjct: 178 TEAMSRSNIILWVKKSLEEGKTIHVVNDQWRTPTLAEDLAMGCFLMA-------DKKISG 230 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 IF+++ + A + S + + ++ A RP + K Sbjct: 231 IFNISGKDFLTP-YEMA---IKTAKYFNLDASLIVKTDASRFSQPAKRPPKTGFILDKAI 286 Query: 270 NTHNIRISTWKEGVR 284 N ++ EG+ Sbjct: 287 QQLNYAPRSFDEGIA 301 >gi|134046340|ref|YP_001097825.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5] gi|132663965|gb|ABO35611.1| dTDP-4-dehydrorhamnose reductase [Methanococcus maripaludis C5] Length = 276 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 30/279 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI---IR-----------VGRPDIDLLKPKDFASFFL 47 K LVIG G + + + E I + + +D+ + Sbjct: 3 KVLVIGL-GMVGYEIVKKYFETGEYKISIASRSESGFFKGVLDKRLVDVTNEQKVQKVIQ 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 +PD +IN AA T VD E E E+A+ NA G I KA S G +ISTDYVFDG Sbjct: 62 DINPDFVINTAAMTNVDFCEKEKELAYKANAISVGYIGKACKSTGSTLCHISTDYVFDG- 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKV--ASYTNNYVI-LRTAWVYSIFGSNFLLSMLR 164 E NP+N YG +K GE + Y N ++ + T + +S NF +L Sbjct: 121 EDGNYVETDVINPINYYGFTKAEGERILNEMDYENKSIVRISTPYGFSPVKLNFFTWVLE 180 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 K + I+V+ DQ+ T T+ ++ +I+I L GI H +S + Sbjct: 181 NLKYEKPINVITDQYNTSTNLNNLSEIMIKI-------QQNDLSGILHF-GGSEKLSRYE 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 FA I S + + + + + A RP + L Sbjct: 233 FALKI---SEDYNLNSKLISPVKSSELNWVAKRPKDTSL 268 >gi|331267005|ref|YP_004326635.1| dTDP-rhamnose synthase [Streptococcus oralis Uo5] gi|326683677|emb|CBZ01295.1| dTDP-rhamnose synthase [Streptococcus oralis Uo5] Length = 214 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 16/217 (7%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIG 92 +D+ + F +P ++ + AA+TAVD AEDE E+ F+IN G +AKA++ G Sbjct: 1 MDITNAEMVEEVFAKVNPTLVYHCAAHTAVDVAEDEGKELDFAINITGTENVAKASEKYG 60 Query: 93 IPCIYISTDYVFDGLS--RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV 150 +YI+TDYVFDG + +P YG++K GEE V + T+ + I+RTAWV Sbjct: 61 TTLVYIATDYVFDGKKPIGQEWEVDDLPDPQTEYGRTKQMGEELVENLTSQHYIIRTAWV 120 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + NF+ +M L++ + ++VV DQ G PT + + + N E G Sbjct: 121 FG---KNFVFTMQSLSQTHKTLTVVNDQHGRPTWTRTLVEFMTYLTDNQKE------YGY 171 Query: 211 FHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRI 246 +H++ D + D A I +S P V Sbjct: 172 YHLSNDAAEDTTCCDLAVEILKDSDVEVIP---VNPC 205 >gi|291567036|dbj|BAI89308.1| putative methionine adenosyltransferase [Arthrospira platensis NIES-39] Length = 293 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 115/290 (39%), Gaps = 27/290 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI----------DLLKPKDFASFFLSFS 50 K LV G +G + ++ + E+ + DL D + Sbjct: 4 KLLVTGASGFLGWNICQVAKSRWEVYGTYNSSPVTDSGVKFIKTDLTVLGDLKEVWEEIK 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + ++ P+I+ IN AG +A + GIP ++ STD VFDGL Sbjct: 64 PDAVIHAAAASKPNFCQENPDISHKINVVAAGDMASLCGAAGIPYVFTSTDLVFDGL-NP 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P+NIYG+ K+ E ++ + I R +Y I G +F+ ++ K Sbjct: 123 PYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYGIASPHGGSFMQGFIKTLK 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +++ D+F TP S A+ ++ + GI H+ +S +F Sbjct: 183 SGNFLNLFEDEFRTPVSGTTAAKGLLLAIEKKV-------NGILHL-GGKQRISRYEFG- 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + P ++ + + A R + LD S+ + Sbjct: 234 --LLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLDSSQAFD-LGYEPP 280 >gi|284050213|ref|ZP_06380423.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Arthrospira platensis str. Paraca] Length = 293 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 115/290 (39%), Gaps = 27/290 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-GRPDI----------DLLKPKDFASFFLSFS 50 K LV G +G + ++ + E+ + DL D + Sbjct: 4 KLLVTGASGFLGWNICQVAKSRWEVYGTYNSSPVTDSGVKFIKTDLTVLGDLKEVWEEIK 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + ++ P+I+ IN AG +A + GIP ++ STD VFDGL Sbjct: 64 PDAVIHAAAASKPNFCQENPDISHKINVVAAGDMASLCGAAGIPYVFTSTDLVFDGL-NP 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAK 167 P E P+NIYG+ K+ E ++ + I R +Y I G +F+ ++ K Sbjct: 123 PYRETDLVCPINIYGEQKVKAEGEILARYPQAAICRMPLMYGIASPHGGSFMQGFIKTLK 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +++ D+F TP S A+ ++ + GI H+ +S +F Sbjct: 183 SGNFLNLFEDEFRTPVSGTTAAKGLLLAIEKKV-------NGILHL-GGKQRISRYEFG- 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + P ++ + + A R + LD S+ + Sbjct: 234 --LLMAQVLDLPADRITPGKQQDVKSIAPRSPDTSLDSSQAFD-LGYEPP 280 >gi|332709592|ref|ZP_08429552.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] gi|332351625|gb|EGJ31205.1| dTDP-4-dehydrorhamnose reductase [Lyngbya majuscula 3L] Length = 292 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 34/300 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD-----------IDLLKPKDFASFFLSFS 50 K LV G +G + +L + + +I DL + ++ F Sbjct: 4 KLLVTGASGFLGWNLCQLAKEQWDIYGTYFSQTIDIPGITLVKADLREFQEIKHLFAEIQ 63 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P +I+ AA + + + E ++SIN + IA+ + IPC++ STD VFDGL Sbjct: 64 PAGVIHTAAQSKPNFCQTHREESYSINVTASINIARLSADYDIPCVFTSTDLVFDGL-NP 122 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAK 167 P E P +P++ YG+ K+ EE + S+ I R ++ I S+F+ L++ + Sbjct: 123 PYLETDPVSPISYYGEQKVMAEEGMRSHYPKVAICRMPLMFGIVPPTASSFIQPFLKIIR 182 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 E R +S+ D+ TP S A+ ++ + +G+ ++ +S DF Sbjct: 183 EGRPLSLFTDEIRTPVSGTTAAKGLLLALEKV--------QGLVNLGGKE-RISRYDFGC 233 Query: 228 ---YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 +F S + G R K P A R + LD S L + + + +E + Sbjct: 234 LMAEVFELSQDNLG------RCLQKDVPMAAPRSPDTSLDSS-LGFSLGYQPLSVREQLE 286 >gi|300710893|ref|YP_003736707.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3] gi|299124576|gb|ADJ14915.1| dTDP-4-dehydrorhamnose reductase [Halalkalicoccus jeotgali B3] Length = 283 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 25/281 (8%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV--------GRPD--IDLLKPKDFASFFLSFSPD 52 LV G +G + + L ++ G +D+ + A PD Sbjct: 4 LLVTGASGLLGRCLLDAEWSGGRVVGTYYTTPIESGHETVHLDVRDGEAVARLVERVDPD 63 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V+I+ AA T+V+ ED+P++A NA G + AA ++G IY ST YVF Sbjct: 64 VVIHSAAATSVEACEDDPKLAHGTNARGTKHVVDAATAVGARVIYPSTAYVFGDGGPV-H 122 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKER 169 E P+N YG+SKL GE V + + I+R V ++ +F + + Sbjct: 123 AEDDEPAPMNRYGRSKLDGERYVQAASPENTIVRFCVVVNLGPADSPDFGSWVRGRLESG 182 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + ++ DQ TPT A+ + + G+FH+ + ++ + I Sbjct: 183 ERVRLIDDQEITPTVLSDAIDALGYLVEH-------ETAGVFHVASPD-RLTRYELGVEI 234 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + G + I + +A RP + CL KL+ Sbjct: 235 ---ARRHGLDPDLLEAIPIAEMDWQAPRPDHLCLGAEKLSQ 272 >gi|197294957|ref|YP_002153498.1| hypothetical protein BCAS0105 [Burkholderia cenocepacia J2315] gi|195944436|emb|CAR57038.1| putative exported protein [Burkholderia cenocepacia J2315] Length = 321 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 122/315 (38%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L++G +G + +++++ ++ + + ++D+L Sbjct: 13 ILLVGASGLLGRAVAASLSREPSLTLLATIRNPQGAGAKRLALPPDNIAELDVLDSPSLE 72 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F P +I AA D E +P A +IN I A G + ISTDYV Sbjct: 73 RLFEIHKPAAVILCAAERRPDVCERDPAAARAINVTAPARIGALAARYGAWTLGISTDYV 132 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR ++ ++ Sbjct: 133 FDG-KAAPYSEDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIVDWSESAVT 191 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A+ I + + ++ GI H ++ Sbjct: 192 SLVPAVVASARPGADAVGMDAWAIRYPTYTPDVAQVIRDLTLRHLAGD--TVTGIRHWSS 249 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ A+ I A G + + I PT A RP LD +++ Sbjct: 250 EE-PMTKYAIAQRI----AAALGIEASLTPITQ---PTDATPRPYDCHLDATRVRALGID 301 Query: 275 RISTWKEGVRNILVN 289 + + + IL + Sbjct: 302 YATPFDTALHAILHD 316 >gi|194708380|gb|ACF88274.1| unknown [Zea mays] Length = 322 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 40/317 (12%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI-----------------DLLKPKDF 42 + LV+G +G + Q L + V +++ DL F Sbjct: 9 RVLVVGGSGYLGQHLLAASSTVDRLDVAFTHHSPAPPQPLLETLPSVRAFRADLRSGDGF 68 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYI 98 + SF P V++N AA + E +P A + N ++ S G I + Sbjct: 69 EAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGNEDSLLIQL 126 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 127 STDQVYEGVK-SFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQTISP 185 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + M + + +++ D+F P + I+ + + + Sbjct: 186 VAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPDDGKK---VQV 242 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + + RG S + + P +D +KL Sbjct: 243 LLNVGGPDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDISMDITKLTQ 299 Query: 271 THNIRISTWKEGVRNIL 287 I+ ++++GVR+ L Sbjct: 300 ILGIKPISFQDGVRSTL 316 >gi|91782662|ref|YP_557868.1| NAD dependent epimerase/dehydratase [Burkholderia xenovorans LB400] gi|91686616|gb|ABE29816.1| dTDP-4-dehydrorhamnose reductase [Burkholderia xenovorans LB400] Length = 306 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 75/305 (24%), Positives = 120/305 (39%), Gaps = 29/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 K VIG +G + ++L+ Q ++ GR +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRALADELAQQPGWQVAATAFSRPAPGRIALDIRDAQAVEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +P +A ++N + +A AA+ G + ISTDYVFDG P Sbjct: 63 ALVIAAAERRPDVCEHDPALARALNVDAVRTLAAAANRRGAWTLSISTDYVFDGT-HPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--------FLLSMLR 164 S PLN YG SKL GE + T+ +LR +Y S Sbjct: 122 QHDSVPAPLNAYGHSKLEGERALTESTDLGCVLRLPLLYGPIVSWAESAVTSLVPAIAAS 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 A + + PT +A I Q+ + ++RGI + D P++ + Sbjct: 182 AAPAGQPAVMDAWAIRYPTFTPDVAFVIRQMLE--LHARGDAIRGIVQWSGDE-PMNKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + AE + + T PT A RP L ++L R + + + Sbjct: 239 IAVRL----AEALQLDAHLTPQRT---PTDATPRPHNCHLASTRLEALGIGRRTPFDTAI 291 Query: 284 RNILV 288 R +L Sbjct: 292 RQVLA 296 >gi|78060715|ref|YP_367290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] gi|77965265|gb|ABB06646.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. 383] Length = 314 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 73/315 (23%), Positives = 126/315 (40%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKDFA 43 L+IG G + +++++ ++ + ++ R ++D+L Sbjct: 6 ILLIGAAGLLGRAVAASLARESSLNLVATIRNPQGAGAKRLALPPENLAELDVLDEPALE 65 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN I A G + ISTDYV Sbjct: 66 HLFATRQPAAVIICAAERRPDVCERDPAGARAINVTAQARIGALAARYGAWTLGISTDYV 125 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR ++ ++ Sbjct: 126 FDG-KAAPYREDAAPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLFGPIVDWSESAVT 184 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A I + + S+ G+ H + Sbjct: 185 SLVPAIVASARPGADAVGMDAWAIRYPTYTPDVADVIRDLTLRHLAG--ASITGLRHWSG 242 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ D A+ I A G + + RI PT A RP LD S++ + Sbjct: 243 EA-PMTKYDIAQRI----AAALGIDAALKRI---DQPTDATPRPYDCHLDASRVRSAGID 294 Query: 275 RISTWKEGVRNILVN 289 + + +R +L + Sbjct: 295 HATPFDTALRAVLRD 309 >gi|299742513|ref|XP_001832535.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea okayama7#130] gi|298405218|gb|EAU89284.2| NAD dependent epimerase/dehydratase [Coprinopsis cinerea okayama7#130] Length = 300 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 27/288 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRP-----DIDLLKPKDFASFFLSFSPD 52 MK +V G +G + ++ + Q DV + R +DL + F F PD Sbjct: 1 MKVIVTGASGVLGSAVKAAFEQAQADVLGLAFSRAGPGLEKLDLTDKEAVEKKFSEFKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I+ AA D AE +P +N G +++ + +G +YISTDYVFDG P Sbjct: 61 WVIHCAAERRPDVAEKDPAACKILNEGVPGHLSQLSKQLGFTLVYISTDYVFDG-QAPPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNF-----LLSMLRLA 166 SPTNPLN+YG +K GE V ++LR +Y N +L + Sbjct: 120 QPSSPTNPLNLYGVTKRDGEVAVLGVEGAKTIVLRVPVLYGPAPKNSDSAVNILVDVVQD 179 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + ++ + D PT+ L IA+ +++++ + I H +A P + + Sbjct: 180 QSGKQYKMDHDATRYPTNVLDIAKFLVRLSAL-----KKPVPSILHYSAHE-PFTKYEM- 232 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTK--AHRPAYSCLDCSKLANTH 272 IF + G P+ + + T P A RP LD + Sbjct: 233 CLIF--AKILGLPHGHIVPV-THPPPGPGTASRPRDCHLDTRETEALG 277 >gi|302675845|ref|XP_003027606.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8] gi|300101293|gb|EFI92703.1| hypothetical protein SCHCODRAFT_17553 [Schizophyllum commune H4-8] Length = 307 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 114/294 (38%), Gaps = 46/294 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCV----QDVEIIRVGRPD-------IDLLKPKDFASFFLSF 49 MK ++ G +G + ++ +D E+I + +DL S Sbjct: 1 MKIVITGASGVLGSAIRKAFESASGKDYEVIPLSHSQSGNGLIPLDLTDSGKVEELLSSK 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 PD +I+ AA D AE +PE A +NA +AK + S+G YISTDYVFDG Sbjct: 61 KPDWVIHCAAERRPDVAEKDPEAARRLNAAVPDQLAKLSKSLGFTLTYISTDYVFDG-KN 119 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSN-------FLLS 161 P SPTNPLN+YG +K GE V ++LR +Y S +L Sbjct: 120 PPYKPSSPTNPLNLYGVTKRDGEIAVLGVEGAKVMVLRVPVLYGPIPSGKNSESAINILL 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + + + PT+ L I + + +I+ L + I H + Sbjct: 180 DIVKDQSGKTYKMDHYAVRYPTNVLDIGKFLEKISGALADVPS-----IVHYS------- 227 Query: 222 WADFAEYIF--WESAERGGPYSKVYRIF--TKQYPTK-----AHRPAYSCLDCS 266 A +F +E + G V I T A RP LD S Sbjct: 228 ----ASEVFTKYEICQLYGKILNV-PITHITADAAEPSGASAASRPRDCKLDTS 276 >gi|58263484|ref|XP_569152.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134108330|ref|XP_777116.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259801|gb|EAL22469.1| hypothetical protein CNBB3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223802|gb|AAW41845.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 303 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 30/290 (10%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRV--GRPD-------IDLLKPKDFASFFLSFSP 51 V G +G + +++++ Q ++I + R D +DL+ + +FF S Sbjct: 5 NVAVTGASGLLGRAVAAYFISQGDQVISLANSRADRDPHYTKLDLMDQEAVKNFFGSNDI 64 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D +++ AA D AE +PE A INA +A A G IYISTDYVF+G P Sbjct: 65 DFVVHCAAERRPDVAEADPEKAAKINAAVPAQLASLAKEQGFTLIYISTDYVFNGR-NPP 123 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV---ILRTAWVYS--IFGSNFLLSMLRLA 166 + +PL +YG+ KL GE+ V + +LR +Y + + +++LR Sbjct: 124 YEVNDTPDPLQMYGRQKLDGEKAVLAEHEKGAKVSVLRIPVLYGRTEYNAESAVNILRDV 183 Query: 167 ---KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + + + Q PT+ I R + +AH + L I H + ++ Sbjct: 184 VEDQSGKTYKMDARQVRFPTNVEDIGRVLYDLAHL-----EKPLPPILHYASPAPALTKY 238 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTH 272 D I + P V + T PT A RP + L L Sbjct: 239 DMTSII---AKHLNLPIDHVIKDTT--VPTGATPRPENTQLSTKVLKELG 283 >gi|210633542|ref|ZP_03297811.1| hypothetical protein COLSTE_01728 [Collinsella stercoris DSM 13279] gi|210159137|gb|EEA90108.1| hypothetical protein COLSTE_01728 [Collinsella stercoris DSM 13279] Length = 254 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 81/253 (32%), Positives = 122/253 (48%), Gaps = 26/253 (10%) Query: 53 VIINPAAYTAVDKAEDEPE---IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 +IN AYTAVDKAE PE A+ NA G +A+ GI +++S+DYVFDG + Sbjct: 8 AVINCGAYTAVDKAET-PEGRVAAWRANAIGPALLARTCAEHGITLVHVSSDYVFDGTAE 66 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL---- 165 E P +PL++YG+SK AG+ VA + I+R++WV G NF+ +M L Sbjct: 67 V-HAEDEPLSPLSVYGQSKAAGDLAVAG-CPRHYIVRSSWVIGE-GRNFVRTMKSLSDRV 123 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIA---HNLIENSDTSLRGIFHMTADGGP 219 A +++VV DQ+G T +A I+ + E S + G +++T G Sbjct: 124 ADPADALDKVTVVDDQYGRLTFTRDMAEGILWLLGYREGGAEPSSPAPHGAYNLTGSGPV 183 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQY-----PTKAHRPAYSCLDCSKLANTHNI 274 SWA A +F + G +V + T +Y A RP +S LD SK+ Sbjct: 184 ESWAQIAARVFDLANGNG---ERVVPVSTAEYYAGAEGAIAPRPVHSALDLSKI-GVTGF 239 Query: 275 RISTWKEGVRNIL 287 + W E + + Sbjct: 240 VPADWTERLAEYI 252 >gi|255523732|ref|ZP_05390698.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|296186736|ref|ZP_06855138.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|255512601|gb|EET88875.1| dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] gi|296048773|gb|EFG88205.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium carboxidivorans P7] Length = 300 Score = 185 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 31/301 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-----------IDLLKPKDFASFFLS 48 K L+ G+NG + + L+S+ ++ E+ + R + D+ ++ + Sbjct: 6 KILITGSNGMLGKDLTSLFSKNDNFEVFGINRSNDINLKDDHYFVCDITDFEELNNILKY 65 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P++II+ AA VD E + A+ +N+E ++ S IYISTD +F+G + Sbjct: 66 INPEIIIHCAANVNVDGCEKDKNYAYKLNSESTKILSSY-KSEKTKFIYISTDSIFNGET 124 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRL 165 E NPLN Y SK GE N +I+RT +Y +GS+ + L+ Sbjct: 125 GN-YKEDDKANPLNYYAFSKFEGENFALLQNKNAIIIRT-NIYGFHKPYGSSLVEWALKN 182 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 K +IS D + P Q+ + ++++ +GI H T ++ +F Sbjct: 183 LKSENKISGFNDVYFNPIYTGQLGKIVMKLIQI-------DYKGIIH-TGCENFINKYEF 234 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + + + G + A RP + L+ +KL + I T ++G+ Sbjct: 235 ---LIRIAQKFGLNNELIDESSVDSINFSARRPKNTTLNITKLKGLIDFTI-TLEDGLNQ 290 Query: 286 I 286 + Sbjct: 291 L 291 >gi|224032413|gb|ACN35282.1| unknown [Zea mays] Length = 330 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 128/322 (39%), Gaps = 42/322 (13%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI-----------------DLLKPKDF 42 + LV+G +G + Q L + V +++ DL F Sbjct: 9 RVLVVGGSGYLGQHLLAASSTVDRLDVAFTHHSPAPPQPLLETLPSVRAFRADLRSGDGF 68 Query: 43 ASFFLSF-----SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--- 94 + SF P V++N AA + E +P A + N ++ S G Sbjct: 69 EAISASFGQVMFQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGNEDSL 126 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS-- 152 I +STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 127 LIQLSTDQVYEGVK-SFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQ 185 Query: 153 ----IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL- 207 + S + M + + +++ D+F P + I+ + + Sbjct: 186 TISPVAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHASDDG 245 Query: 208 RGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 + + + GGP VS AE + + RG S + + P +D Sbjct: 246 KKVQVLLNVGGPDRVSRLQMAESV---AVVRGYNPSIIKSVSASSVNRGVASPPDISMDI 302 Query: 266 SKLANTHNIRISTWKEGVRNIL 287 +KL I+ ++++GVR+ L Sbjct: 303 TKLTQILGIKPISFQDGVRSTL 324 >gi|186476724|ref|YP_001858194.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] gi|184193183|gb|ACC71148.1| dTDP-4-dehydrorhamnose reductase [Burkholderia phymatum STM815] Length = 306 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 125/309 (40%), Gaps = 33/309 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVG--RP-----DIDLLKPKDFASFFLSFSPD 52 K VIG +G + ++++ V QD +I++ RP +D+ F P+ Sbjct: 3 KVAVIGASGLLGRTIAGELVRQQDWQIVQTTFSRPMPESVPLDIRDASAVDQFVERERPN 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 I+ AA D E+ P +A ++N + AIA AA + ISTDYVFDG + P Sbjct: 63 AIVIAAAERRPDVCENNPALARALNVDAVRAIASAARRHDAWVLSISTDYVFDGTA-PPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL------- 165 + +P+N YG+SKL GE +A + +LR ++ ++ L Sbjct: 122 RYDATPSPINAYGRSKLEGERALADAADLGCVLRLPLLFGPIVDWQESAVTSLVPAIAAS 181 Query: 166 -----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 + + + PT L +A + Q+ ++ G + D P+ Sbjct: 182 ASAPASSGAKPAVMDAWAIRYPTYTLDVAVVVRQLLERHARGE--AICGTVQWSGDE-PM 238 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTW 279 + + A+ + A +++ T PT A RP LD ++L R + + Sbjct: 239 TKYEIAQRL----AHALQMDAQLTPQHT---PTDATPRPYNCQLDSARLEALGIGRRTPF 291 Query: 280 KEGVRNILV 288 +R + Sbjct: 292 DTAIREVFA 300 >gi|221122492|ref|XP_002157953.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Hydra magnipapillata] Length = 295 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 75/302 (24%), Positives = 118/302 (39%), Gaps = 22/302 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDI-------DLLKPKDFASFFLSFSP 51 MK ++ G +G + +S+ V + E++ +G + DL +D F P Sbjct: 1 MKVVISGASGLLGRSIYRELVNNTKWEVLGLGFTRLGGNLHKVDLCNEEDLKRFIEKEKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV I+ AA D E +N I+K + G +YISTDYVFDG P Sbjct: 61 DVFIHSAAERRPDFVASNKEHTTQLNITSTKIISKLMNQNGGFVLYISTDYVFDGF-NPP 119 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLRLAKE 168 NPLN YG SK GE + NY ILR +Y + + + L K+ Sbjct: 120 YKTTDIPNPLNEYGLSKREGEICILENCTNYGILRVPILYGEVEYLQESAVTGLFELLKD 179 Query: 169 RREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + V + + PTS IA QI + S GI+H +++ + + Sbjct: 180 SKTPKKVSNYEQRFPTSTDDIAVVCRQIVEY--NRLNNSFHGIWHWSSNQKMTKY----K 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + + + RP LDCS L + + + +KE ++ L Sbjct: 234 IVEIMAQVFNLSMKHIEP--DNEPSVGVSRPYDCELDCSNLIDLGIGKQTDFKENIKKYL 291 Query: 288 VN 289 Sbjct: 292 EK 293 >gi|170099672|ref|XP_001881054.1| predicted protein [Laccaria bicolor S238N-H82] gi|164643733|gb|EDR07984.1| predicted protein [Laccaria bicolor S238N-H82] Length = 297 Score = 184 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 29/280 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRV-------GRPDIDLLKPKDFASFFLSFSPD 52 M+ +V G +G + ++ + V+++ + G +DL + +D F F PD Sbjct: 1 MRVIVTGASGVLGSAVHNAFKTTGVDVLGLSYSRAREGLEQLDLTRKEDVEKVFSQFKPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +I+ AA D AE +PE A +NA+ +A + S+ +YISTDYVFDG S P Sbjct: 61 WVIHCAAERRPDVAEKDPESAQRLNADVPAYLASLSKSLKFKLVYISTDYVFDGTS-PPY 119 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI-LRTAWVYSIFGSNF---LLSMLRLAKE 168 SPTNPL +YG++K GE V + + VI LR +Y N + +L + ++ Sbjct: 120 TPSSPTNPLQLYGRTKRDGEVSVLTVDSAKVIVLRVPVLYGPAPKNSDSAINILLDVVQD 179 Query: 169 RREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 R D + T PT+ + IA ++++ + + I H ++D P + + Sbjct: 180 RSGKKYNMDHYATRYPTNTIDIANFLVRLTAL-----KSPIPPILHYSSDE-PFTKYEIC 233 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKA---HRPAYSCL 263 + G P+ + I + P+ A RP L Sbjct: 234 ---LTFAKILGRPHDHI--IPNAEAPSGADATTRPRDCHL 268 >gi|321251986|ref|XP_003192247.1| hypothetical protein CGB_B5250W [Cryptococcus gattii WM276] gi|317458715|gb|ADV20460.1| Conserved hypothetical protein [Cryptococcus gattii WM276] Length = 303 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 30/289 (10%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRV--GRPD-------IDLLKPKDFASFFLSFSPD 52 V G +G + +++++ Q ++I + R D +DL+ + +FF + + D Sbjct: 6 VAVTGASGLLGRAVAAHFISQGDQVISLANSRADRDPHYTKLDLMDQETVKNFFKTNNID 65 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 +++ AA D AE +PE A INA +A A G IYISTDYVF+G P Sbjct: 66 FVVHCAAERRPDVAEADPEKAAKINAAVPAQLAALAREQGFTLIYISTDYVFNGR-NPPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYS--IFGSNFLLSMLRLA- 166 + +PL +YG+ KL GE+ V + +LR +Y + + +++LR Sbjct: 125 EVNDTPDPLQMYGRQKLDGEKAVLAEHEKGAKVTVLRIPILYGRTEYNAESAVNVLRDVV 184 Query: 167 --KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + + Q PT+ I R + +AH + L I H + ++ D Sbjct: 185 EDQSGKTYKMDARQTRFPTNVEDIGRVLYDLAHL-----EQPLPPILHYASPAPALTKYD 239 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTH 272 I + P V + T PT A RP + L L Sbjct: 240 MTRII---AKHLNLPIDHVIKDIT--VPTGATPRPENTQLSTKALKELG 283 >gi|159026655|emb|CAO89003.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 292 Score = 184 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 29/291 (9%) Query: 1 MK-CLVIGNNGQIAQSLSS-----------MCVQDVEIIRVGRPDIDLLKPKDFASFFLS 48 MK L+ G +G + + +V I+L F Sbjct: 1 MKTLLITGVSGFLGWHIYQKTRSSWASFGTYLNHNVNSNDPNLIKINLTDLVAVKELFQQ 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD +I+ AA + + ++ P+ + +IN + IA+ IP ++ STD VFDG Sbjct: 61 IKPDAVIHGAAQSKPNLCQEFPQASEAINLTASLEIARLCSQYQIPLVFTSTDLVFDGR- 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRL 165 P E P +P+++YG+ K+A E+ + + I R ++ ++FL L+ Sbjct: 120 NAPYSENDPVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFGSPSPSANSFLQPFLKT 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 +E +E+S+ D++ T ++ + +GI H+ VS F Sbjct: 180 LQEGKELSLFTDEYRTAVGVNSAVDGLLLALEKV--------QGIIHLGGKE-RVSRYQF 230 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 +A ++ P A RP LD S LA + + Sbjct: 231 G---LLMAAVFNLRREQIKPCLQCDVPMSAPRPQDVSLDSS-LAFSLGYQP 277 >gi|108763033|ref|YP_632780.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622] gi|108466913|gb|ABF92098.1| putative dTDP-4-dehydrorhamnose reductase [Myxococcus xanthus DK 1622] Length = 300 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 28/302 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGR-----------PDIDLLKPKDFASFFLS 48 M+ LV G+NG + + S+ Q +++ +GR +DL + D A+ + Sbjct: 1 MRFLVTGSNGLVGSRVCSLLHQGGHQVVGLGRGARRTGGAYGYASVDLTREADVAAAVET 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P+V+I+ A+ T VD E +PE A++ N A A+A++A G +++STDYVFDG Sbjct: 61 AAPEVVIHCASMTEVDACEKDPEAAYAGNVTAAAAVARSARKAGAHLVHVSTDYVFDG-E 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLR 164 P E + NP +Y +K GE+ I RTA VY NF ++ Sbjct: 120 AGPYSEDAIPNPRGVYSVTKHMGEQAARMLAPGCAIARTAVVYGWPPVEGRLNFGAWLVT 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 ++ +++ + DQ +P+ A +A ++++ + G+++ T G + Sbjct: 180 ALEKGQQVRLFEDQIVSPSFADNVAAMLVELGTRRLG-------GVWN-TCGGTVIDRVG 231 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVR 284 F G + + + RP S L K+ ++ E + Sbjct: 232 FGRA---LCEVFGFDAKLIVPTRMAELKLASPRPLKSGLRTDKVRAELSVPPLALAESLS 288 Query: 285 NI 286 Sbjct: 289 RF 290 >gi|221198982|ref|ZP_03572027.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] gi|221205242|ref|ZP_03578258.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221175033|gb|EEE07464.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2] gi|221181433|gb|EEE13835.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD2M] Length = 316 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 72/311 (23%), Positives = 119/311 (38%), Gaps = 37/311 (11%) Query: 6 IGNNGQIAQSLSSMCVQDVEI--IRVGR-----------------PDIDLLKPKDFASFF 46 IG +G + +++ + +D I R +D+L F Sbjct: 2 IGASGLLGRAVVASLSRDPAFATIATIRNRDTRGARLLAPPPDKIAMLDVLDRPALERAF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P ++ AA D E +P A +IN + I A G + ISTDYVFDG Sbjct: 62 DLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPARIGALAARYGAWTLGISTDYVFDG 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + P E + NPLN+YG++KL GE + + + +LR +Y ++ L Sbjct: 122 RA-APYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIADWSESAVTSLV 180 Query: 166 ------AKER-REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 A+ + + PT +A I + H + S+ GI H + D Sbjct: 181 PAIVASARAGAEAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAG--ASVVGIRHWSGDEA 238 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + A+ I AE G ++ + I T T RP LD ++L + Sbjct: 239 MTK-YEIAQRI----AEAMGLHASLAPIDTPADATP--RPYDCHLDAARLHALGIRHATP 291 Query: 279 WKEGVRNILVN 289 + +R +L Sbjct: 292 FDTALREVLRE 302 >gi|225352522|ref|ZP_03743545.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156716|gb|EEG70110.1| hypothetical protein BIFPSEUDO_04145 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 473 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 84/297 (28%), Positives = 128/297 (43%), Gaps = 25/297 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINP 57 + +V G NG++ +++ ++ E D+ F + IIN Sbjct: 189 RTMVFGCNGKLGKAIRQYAEDHHLEGFEYHDTD--TFDISDAHAFENVDWDL-YGTIINA 245 Query: 58 AAYTAVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 AA+TAVD AE + A+ N +G +AK A I ++IS+DYVFDG E Sbjct: 246 AAFTAVDAAETAEGRKAAWLTNVQGVKNLAKVATDHKITLVHISSDYVFDG-ELEFHKED 304 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 PL +YG++K AG+ V + +LR++WV G NF+ ML LA+ Sbjct: 305 EGFAPLGVYGQTKAAGDALV-ENVPQHYLLRSSWVIGE-GRNFVTRMLGLAQSGEPAEAP 362 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 DQFG T +A AI + E G ++MT G SW D A+ ++ + Sbjct: 363 RDQFGRLTFTFDMANAIFHLLTTHAE------YGTYNMTGSGKVASWYDIAKIVYETAEA 416 Query: 236 RGGPYSKVYRIFTKQYPT---KAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 S + ++Y A RP LD SKL +T W+E + + L Sbjct: 417 ---DISALKANSVEEYVQNTHGALRPRNCSLDLSKLEST-GYAPVDWEEALHDYLQK 469 >gi|242791620|ref|XP_002481794.1| NAD dependent epimerase/dehydratase family protein [Talaromyces stipitatus ATCC 10500] gi|218718382|gb|EED17802.1| NAD dependent epimerase/dehydratase family protein [Talaromyces stipitatus ATCC 10500] Length = 312 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 75/310 (24%), Positives = 114/310 (36%), Gaps = 32/310 (10%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEII---------RVGRPDIDLLKPKDFASFFLSFSPDVI 54 LV G G + + ++ Q + +L P D P V+ Sbjct: 6 LVTGATGLLGREVTKSFKQAGWLTVGQGYNRAAPPTILKANLEDPADVKRILDEAKPQVV 65 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPID 113 ++ AA D E PE A IN E A+A+ ++ GI IYISTDYVF G P + Sbjct: 66 VHCAANRQPDACEKNPEQARKINVEATRALAEGTNARGILLIYISTDYVFAGLEGEAPYE 125 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI--FGSNFLLSMLRLAKE 168 + TNP NIYG+ K GEE V T V+LR +Y + ++ + A E Sbjct: 126 TDAKTNPTNIYGEMKRDGEEAVLEATKETGLGVVLRVPVLYGPTEYNGESAVNTILDAVE 185 Query: 169 RRE-----ISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVS 221 + + I + PT+ + R IA I + + SL I H +A+ Sbjct: 186 KSKDPNANIKMDDWARRFPTNTQDVGRVCNDIAVRYIRDKNNIKSLPKILHFSAEEDMTK 245 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST--- 278 + A+ I + + RP + L L I + Sbjct: 246 -YEMAQRIAKILEVK--IPGMIANKEGNDPNAAVKRPYNTHLSTKALRE-LGINVQAMKF 301 Query: 279 ---WKEGVRN 285 W+ +R Sbjct: 302 DDWWRAYLRK 311 >gi|161523066|ref|YP_001585995.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189348108|ref|YP_001941304.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|160346619|gb|ABX19703.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] gi|189338246|dbj|BAG47314.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans ATCC 17616] Length = 333 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 121/314 (38%), Gaps = 37/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEI--IRVGRPD-----------------IDLLKPKDFA 43 LVIG +G + +++ + +D I R +D+L Sbjct: 13 VLVIGASGLLGRAVVASLARDPAFATIATIRNRDTRGARLLALPPDKIAILDVLDRPALE 72 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P ++ AA + E +P A +IN + I A G + ISTDYV Sbjct: 73 RAFDLYRPAAVVVCAAERRPNVCERDPAGARAINVDAPARIGALAARYGAWTLGISTDYV 132 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG + P E + NPLN+YG++KL GE + + + +LR +Y ++ Sbjct: 133 FDGRA-APYREDATPNPLNVYGRTKLEGEAALLAASPLSCVLRLPLLYGPIADWSESAVT 191 Query: 164 RL-------AKER-REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A+ + + PT +A I + H + S+ GI H + Sbjct: 192 SLVPAIVASARAGADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAG--ASVLGIRHWSG 249 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 D + A+ I A+ G + + I T T RP LD ++L Sbjct: 250 DEAMTK-YEIAQRI----ADALGLRASLAPIDTPADATP--RPYDCHLDAAQLHALGIHH 302 Query: 276 ISTWKEGVRNILVN 289 + + +R +L + Sbjct: 303 ATPFDTALREVLRD 316 >gi|212637298|ref|YP_002313823.1| NAD dependent epimerase/dehydratase family protein [Shewanella piezotolerans WP3] gi|212558782|gb|ACJ31236.1| NAD dependent epimerase/dehydratase family protein [Shewanella piezotolerans WP3] Length = 303 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 23/283 (8%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSPD 52 K +V G G + +++ + DVE++ G +DL +F + PD Sbjct: 3 KVMVTGATGLLGRAVVAELEAQPDVEVLACGYSRAVQGVHRLDLTLSSQVTAFIETHQPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VI++ AA D +E P A ++NA+ + AA G +Y+STDYVFDG + P Sbjct: 63 VIVHCAAERRPDISEQNPAAALALNADATRLLTLAASQCGAWLLYVSTDYVFDGTA-PPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---R 169 +E S TNP+N YG SK GE V + +LR +Y + +++ L + Sbjct: 122 NEHSATNPVNFYGDSKRQGEMIVTEAKQGFAVLRLPILYGAVETLQESAVMVLLNQLLDE 181 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 E V +PTS IA AI ++ ++ + L G +H +A +S + + Sbjct: 182 NEQFVDDWAVRSPTSTEDIASAIAKMIS--LKTTGAHLAGHYHFSASD-TMSKY---QML 235 Query: 230 FWESAERGGPYSKVYRIFTKQYPT-KAHRPAYSCLDCSKLANT 271 G + + + PT A RP L C +LA+ Sbjct: 236 LTMGGLLGLNTEHLKPVTS---PTDSAKRPHDCSLSCERLASL 275 >gi|325967694|ref|YP_004243886.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28] gi|323706897|gb|ADY00384.1| dTDP-4-dehydrorhamnose reductase [Vulcanisaeta moutnovskia 768-28] Length = 295 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 19/244 (7%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 DL + + PDV+I+ AA VD+ E++ E+ + +N + + AA +G Sbjct: 46 DLTR-DSV-RVINDYKPDVVIHMAAIGNVDQCEEQLELCYRVNVAASRELLTAAYRVGAA 103 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--S 152 Y+STDYVFDG R E P+N YG +KL EE + + I+R AW+Y Sbjct: 104 IYYLSTDYVFDG-ERGMYSEDDAPRPVNYYGLTKLLAEEITRALGGS--IVRVAWIYGTG 160 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 NF +++ ++ + DQ+ +PT I A ++ D G+ H Sbjct: 161 PGRPNFGKTVVEKLMRGEVVTAITDQWSSPTLNTIIGEAFAKLL-------DIKFNGVIH 213 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + G +S +FA I + G + I +A RP S L+ K Sbjct: 214 VV--GPRLSRYEFARAI---ARYFGFSEELIKPIRLIDVNYRARRPRDSSLNNRKAVELL 268 Query: 273 NIRI 276 I + Sbjct: 269 GIPL 272 >gi|227497969|ref|ZP_03928149.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM 15434] gi|226832627|gb|EEH65010.1| dTDP-4-dehydrorhamnose reductase [Actinomyces urogenitalis DSM 15434] Length = 490 Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 22/282 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + LV G GQ+ ++L + + V P+ID+ A S DVI+N AA+ Sbjct: 208 RVLVTGAKGQLGRALMAQLPKAGFSATGVDLPEIDIADAAALAEIDWS-DYDVIVNAAAW 266 Query: 61 TAV---DKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 TAV + AE P A+ NA G +A+ A + ++IS++Y FDG + E Sbjct: 267 TAVDAAETAEGRP-AAWRANATGPANLARVASEHALTLVHISSEYTFDGAQKI-HTEDES 324 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 +PL +YG+SK G+ VA+ +Y++ RT+WV G NF+ +M LA+ + SVV D Sbjct: 325 PSPLGVYGQSKAGGDAAVAATPRHYLV-RTSWVVGD-GKNFVKTMAGLAERGVKPSVVGD 382 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q G T +A II + E G ++++ +G VSW + A ++ G Sbjct: 383 QTGRLTFTTDLAAGIIHLLTTQAE------YGTYNLSGEGPVVSWFEVARRVYEL---LG 433 Query: 238 GPYSKVYRIFTKQYPTK----AHRPAYSCLDCSKLANTHNIR 275 S+V + T++Y A RPA+S LD SK+ Sbjct: 434 HDPSEVTSVSTQEYYAGKEGIAPRPAHSALDLSKIKAAGFTP 475 >gi|37522690|ref|NP_926067.1| methionine adenosyltransferase [Gloeobacter violaceus PCC 7421] gi|35213692|dbj|BAC91062.1| glr3121 [Gloeobacter violaceus PCC 7421] Length = 295 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 29/294 (9%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIR-VGR---------PDIDLL--KPKDFASFFLS 48 + L+ G +G + ++ E++ V R P +DL + +F Sbjct: 4 RLLITGASGLLGFQVASRALQSGWEVVGTVSRHRCPLPIEQPQLDLALEDLSELEAFVGR 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 + PD +++ AA + + E P +A +N A+A+ A G +++STD VFDG Sbjct: 64 YRPDALVHCAAISEAAQCEANPTVALRVNVAATEALARTAGRTGCRFVFVSTDLVFDGRE 123 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFGSNFLLSMLRLAK 167 P E S +PL YG++K+A E++V + +++RT+ + S RL Sbjct: 124 -APYCEESLPSPLGCYGRTKMAAEQRVLELGDGGALVVRTSLLLGPSPSGARSVEERLGA 182 Query: 168 E---RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + ++ D+F +P A +A A++++ + G+ H+ +S Sbjct: 183 QLAAGKRANLFTDEFRSPVYAPDLAAALLELV-------EAGQSGLLHLGGPE-RLSRH- 233 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 A I + G + + YP+ RP LD + + Sbjct: 234 -ALGIL-LAGHFGWDTRLILAASGRDYPSTPPRPTDVSLDSRRAYALLSSPPRP 285 >gi|197124809|ref|YP_002136760.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter sp. K] gi|196174658|gb|ACG75631.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter sp. K] Length = 298 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 109/308 (35%), Gaps = 40/308 (12%) Query: 1 MKCLVIGNN-------------------GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD 41 M+ + G N G I + + D DL Sbjct: 1 MRIAITGANGLLGGAAVGLAAAAGHEVLG-IGRGPCRLAPGGFAW-----ADADLSDGHS 54 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 L F +++ A T VD E EPE+A+ N G +A+A ++G + +STD Sbjct: 55 VERALLEFRAGAVLHAGAMTDVDGCEREPELAWRANVGGTEQVARACRALGARLVAVSTD 114 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNF 158 YVFDG R E +P Y ++K GEE + + R A VYS F Sbjct: 115 YVFDGT-RGGYREDDVPDPRGAYARTKRCGEEAALVIAPDAAVARVAVVYSGRRGAKPTF 173 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 ++ + DQ +PT A A +++ + RG+ H TA Sbjct: 174 ATQVVEKLSRGEPVKAFSDQVVSPTLAESAAEMTLELLL------EHDYRGVLH-TAGAT 226 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + DFA + A R G ++ + T A RP S LD S+ A R Sbjct: 227 ALDRVDFARRV----AARFGLAGEIVPVRTADVKLLAPRPLRSGLDVSRAAALLRSRPLP 282 Query: 279 WKEGVRNI 286 + Sbjct: 283 VDVALDRF 290 >gi|320160045|ref|YP_004173269.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] gi|319993898|dbj|BAJ62669.1| putative dTDP-4-dehydrorhamnose reductase [Anaerolinea thermophila UNI-1] Length = 311 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 105/299 (35%), Gaps = 27/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-----------GRPDIDLLKPKDFASFFLSFS 50 + LV G +G + SL V D E+I V + D + A Sbjct: 7 RLLVTGASGLLGISLCLDAVGDFEVIGVVNSRRLAGAPFSQVQADFTQTGSAAKLIEEVR 66 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +++ AA +D E ++ +NA G +A+A G +YISTD VFDG R Sbjct: 67 PDWVVHCAALADLDACEKNSALSARLNANLPGEVAEACYRSGARLVYISTDAVFDG-ERG 125 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRLAK 167 E NP ++Y + K GE+ V ++ R Y + + Sbjct: 126 GYREDDQPNPQSVYARDKWLGEQAVWQANPQAIVARV-NFYGWSLLGQRSLAEKFYYTLA 184 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 + + D + P + R ++++ +E G++H+ + S F Sbjct: 185 AGKGMMGFTDVYFCPLVNQHLGRILLEMLEKGLE-------GLYHVFS-AECQSKYAFGV 236 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + G + + ++ A R + KL + +E + Sbjct: 237 A---LAKRFGLDAGLIRPVSVQEAGLAARRSPNLTMRVEKLEAALGHAMPGQEEELEAF 292 >gi|166366805|ref|YP_001659078.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis aeruginosa NIES-843] gi|166089178|dbj|BAG03886.1| 3-beta hydroxysteroid dehydrogenase/isomerase [Microcystis aeruginosa NIES-843] Length = 292 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 111/291 (38%), Gaps = 29/291 (9%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIR------VGRPD-----IDLLKPKDFASFFLS 48 MK L+ G +G + + V D I+L F Sbjct: 1 MKTLLITGVSGFLGWHIYQKTRSSWASFGTYFNHNVNSNDPNLIKINLTDLAAVRELFQQ 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD +I+ AA + + ++ P+ + +IN + IA+ IP ++ STD VFDG Sbjct: 61 IKPDAVIHGAAQSKPNLCQEFPQASEAINLTASLEIARLCSQYQIPLVFTSTDLVFDG-K 119 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS---IFGSNFLLSMLRL 165 P E +P+++YG+ K+A E+ + + I R ++ ++FL L+ Sbjct: 120 NAPYSENDTVSPVSVYGEQKVAAEKGILAIYPRAAICRMPLMFGSPSPTANSFLQPFLKT 179 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 +E +E+S+ D++ T ++ + +GI H+ VS F Sbjct: 180 LQEGKELSLFTDEYRTAVGVNSAVNGLLLALEKV--------QGIIHLGGKE-RVSRYQF 230 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 +A ++ P A RP LD S LA + + Sbjct: 231 G---LLMAAVFNISIEQIKPCLQCDVPMIAPRPQDVSLDSS-LAFSLGYQP 277 >gi|331245354|ref|XP_003335314.1| hypothetical protein PGTG_17094 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309314304|gb|EFP90895.1| hypothetical protein PGTG_17094 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 309 Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 119/301 (39%), Gaps = 40/301 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-----QDVEIIRV-------GRPDIDLLKPKDFASFFLS 48 MK L+ G +G + +++ E+ + G +DL ++ Sbjct: 1 MKILISGGSGLLGRAVVDRFKHKDSEPHHEVTSLSFTRSGPGLEKVDLRDENLVSTLVHK 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PDV+I+ AA D AE +PE +N +A+ ++ IG IYI TDYVFDG + Sbjct: 61 LKPDVLIHCAAERRPDVAEGDPEGTQKLNVRVTEHLAELSNQIGFKMIYICTDYVFDGNA 120 Query: 109 -RTPIDEFSPTNPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGS------NF 158 D + NP N YGK+KLAGE+ + + N V LR +Y + N Sbjct: 121 PSGGYDVEATPNPTNFYGKTKLAGEQAMLNTVTNRGNAVSLRVPVLYGKAENNSESAINV 180 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 LL ++ A +++ + PT +A+ ++ +A I H +++ Sbjct: 181 LLDGVKKAAVGQKVLMDDWATRFPTLVDDVAKVLVALAEYKEPLPP-----ILHFSSEEE 235 Query: 219 PVSW---ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH----RPAYSCLDCSKLANT 271 + FA+ + AE ++ P A RP L LA+ Sbjct: 236 YTKYKISLVFAKLLKLSEAEIKNLVAQPDP------PQPAQGETMRPRDCRLSNRALASL 289 Query: 272 H 272 Sbjct: 290 G 290 >gi|220919525|ref|YP_002494829.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-1] gi|219957379|gb|ACL67763.1| dTDP-4-dehydrorhamnose reductase [Anaeromyxobacter dehalogenans 2CP-1] Length = 298 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 76/308 (24%), Positives = 114/308 (37%), Gaps = 40/308 (12%) Query: 1 MKCLVIGNN-------------------GQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKD 41 M+ + G N G I + + +G D DL + Sbjct: 1 MRIAITGANGLLGGAAVGLAAAAGHDVLG-IGRGPCRLPPGG-----LGWADADLADGRS 54 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S L+F + +++ A T VD E EPE A+ N G +A+A ++G + +STD Sbjct: 55 VESALLAFRAEAVLHAGAMTDVDGCEREPEAAWRANVGGTEQVARACRALGARLVAVSTD 114 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNF 158 YVFDG R E NP Y ++K GEE + + R A VYS F Sbjct: 115 YVFDGT-RGGYGEDDLPNPRGAYARTKRCGEEAALVIAPDAAVARVAVVYSGRRGAKPTF 173 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 ++ + DQ +PT A A +++ + RG+ H TA Sbjct: 174 ATQVVEKLSRGEAVKAFSDQVVSPTLAESAAEMTLELLL------EHGYRGVLH-TAGAT 226 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + DFA + A R G ++ + T A RP S LD S+ A R Sbjct: 227 ALDRVDFARRV----AARFGLSGEIVPVKTADVKLLAPRPLRSGLDVSRAAALLRSRPLP 282 Query: 279 WKEGVRNI 286 + Sbjct: 283 IDVALDRF 290 >gi|66814166|ref|XP_641262.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium discoideum AX4] gi|60469300|gb|EAL67294.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium discoideum AX4] Length = 327 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 45/302 (14%) Query: 2 KCLVIGNNGQIAQSLSSMC----VQDVEIIRVGRP--------------DIDLLKPKDFA 43 K L+ G G + ++L + ++ ++++ +G +D+ + + Sbjct: 10 KVLITGATGLLGRALMKVFTQPPLEHIKLVGLGWSRYEKYVNQFPNELRKLDITNDSELS 69 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F F P+VII+ AA D+ E + E +N + + + S+ YIS+DYV Sbjct: 70 EFVNDFKPNVIIHAAAERRPDQCEGDKEKTQKLNVGTTEKLIELSKSVNATLFYISSDYV 129 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSIFGS-- 156 FDG P D + TNPL+ YGK+K E+ + + Y+ILR +Y + Sbjct: 130 FDG-ENPPYDIDAKTNPLSFYGKTKEESEQLIIKASKESDSFKYIILRVPVLYGYVENLK 188 Query: 157 -----NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 +++ + I + Q PT +AR ++ + NS I+ Sbjct: 189 ECAVTAVAEQVIKARDANQPIEIDNWQIRYPTCVEDVARVCYELMISKQYNS------IY 242 Query: 212 HMTADGGPVSWADFAEYIFWESAERG--GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 H + D A + G P S + I ++ P A RP +CL+ Sbjct: 243 HFSGQQMKTK-YDMA---IDMANVLGITNPQSIIKPIN-EKLP-GAPRPHNACLNIFHTV 296 Query: 270 NT 271 +T Sbjct: 297 DT 298 >gi|257053212|ref|YP_003131045.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940] gi|256691975|gb|ACV12312.1| dTDP-4-dehydrorhamnose reductase [Halorhabdus utahensis DSM 12940] Length = 297 Score = 182 bits (463), Expect = 5e-44, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 16/262 (6%) Query: 27 IRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK 86 + +D+ + PD +IN AA T VD E +A INAE G IA Sbjct: 38 VDAPLAKVDIRDREAIREQLEERRPDAVINCAAMTDVDACETASGVAHEINAEAPGQIAS 97 Query: 87 AADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 A IP +++STDYVFDG + TP E + NP+ +YG+SK GE +V +I+R Sbjct: 98 ACAERAIPLVHVSTDYVFDGDTDTPYTESATPNPIQVYGESKRDGEVRVRESEAETIIVR 157 Query: 147 TAWVYSIFGSN-----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +++Y + ++ F + + DQ+ TP+ A A I+ + Sbjct: 158 PSFIYGVHRASGELTGFPAWVRDRLAAGESTPLFTDQWVTPSRAGATASTILALL----- 212 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +T G H+ + + F + I + P + + A RP + Sbjct: 213 --ETEFHGTVHVASRSCVMP-YTFGQAICRQMDA---PAVLLEEGSQTEVDRAAARPTDT 266 Query: 262 CLDCSKLANTHNIRISTWKEGV 283 CL ++ + + T + + Sbjct: 267 CLAVDRVESVLDRPQPTLEADL 288 >gi|220913157|ref|YP_002488466.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6] gi|219860035|gb|ACL40377.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter chlorophenolicus A6] Length = 474 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 18/277 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV+G +GQ+ ++L + + GR + DL + F + + I+N AAYT Sbjct: 191 KVLVVGADGQLGKALREQYDGEARVEFAGRGEFDLAREDSFKNRNWK-NYSAIVNAAAYT 249 Query: 62 AVDKAEDEP--EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 AVD AE E A++IN +A+ A + +++S+DYVFDG E P Sbjct: 250 AVDAAESEEGRAAAWAINVTAVANLARTAVEHDLTLVHVSSDYVFDGSRDN-HGENEPLT 308 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AGE VA + I+RT+WV GSNF+ +M LA + +VV DQ Sbjct: 309 PLGVYGQTKAAGE-AVAGVVPRHYIVRTSWVIGE-GSNFVRTMASLAGRGIKPAVVNDQT 366 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G + IA I + + G ++ + DG SWAD A ++ + G Sbjct: 367 GRLSFTRDIAAFISHLLTT------EAAYGTYNFSNDGPVKSWADIAADVYEQ---VGAS 417 Query: 240 YSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHN 273 + V + T +Y A RP S L+ +K +T Sbjct: 418 RTDVTGVTTAEYFKDKAAAPRPLKSALNLAKAHSTGF 454 >gi|171184951|ref|YP_001793870.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus neutrophilus V24Sta] gi|170934163|gb|ACB39424.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus neutrophilus V24Sta] Length = 279 Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 72/300 (24%), Positives = 114/300 (38%), Gaps = 39/300 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD-----------IDLLKPKDFASFFLSFSP 51 +V G G + ++ + + V R DL Sbjct: 1 MVTGAGGLLGWWVARELAERGYRVYGVYRERGGGLEGVEWVRADL--EAGVPEVVRQA-- 56 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DV+++ AAYT VD E + A+ N A +YISTDYVFDG R Sbjct: 57 DVVVHAAAYTDVDGCEVDRARAYRANFLATL----AVARAARRVVYISTDYVFDG-ERGM 111 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKE 168 E NP+N YG SKL GE V + V++R + ++ + NF + L + Sbjct: 112 YREGDVPNPVNYYGLSKLLGEGPVLA--RGGVVVRVSGLFGVSPHGKRNFGVEALLRLRR 169 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 E+ DQ +PT +A + + +E G+ H+ G P + +FA Sbjct: 170 GEEVRAFVDQRLSPTYVPFLAERLADLLERDVE-------GVLHIA--GEPATRFEFAVA 220 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + G V + A RP S LD S+ A+ + + +E +R+ + Sbjct: 221 ---LAEALGVDRGLVKPARLSEARLAARRPRDSSLDTSRAASM-GLSLPPLREALRHFVK 276 >gi|164656146|ref|XP_001729201.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966] gi|159103091|gb|EDP41987.1| hypothetical protein MGL_3668 [Malassezia globosa CBS 7966] Length = 819 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 119/315 (37%), Gaps = 32/315 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG-------RPDIDLLKPKDFASFFLSFSPD 52 MK LV G +G + +++ C++ ++ + +DL P+ Sbjct: 3 MKVLVTGASGLLGRAVMQTCIRAGHHVVGLAFSRASDAIQQLDLTDADAVYDVVRREHPE 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--CIYISTDYVFDGLSRT 110 V+IN AA D E P+ +N E +AKA + P I+ISTDYVFDG Sbjct: 63 VVINLAAERRPDVVEQNPDAVKKLNVEAPAVLAKACRELDPPAYLIHISTDYVFDGR-NP 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA--SYTNNYVILRTAWVYS--IFGSNFLLSMLRLA 166 P TNPLN YG+SK GE V + + LR +Y +F +++L A Sbjct: 122 PYAVTDATNPLNAYGRSKRDGESAVLASALPGHATNLRLPVLYGETLFPGESAVNVLLEA 181 Query: 167 KERREISVVCDQF--GTPTSALQIARAIIQIA---HNLIENSDTSLRGIFHMTADGGPVS 221 + RE + D PT+ +AR I Q+A + +S + + H +A Sbjct: 182 IQPRESRIRMDAHSVRYPTNVTDVARVIEQLATLYQKRLHSSSSPMPSALHFSAQESMTK 241 Query: 222 WAD----FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 D F+ E + + + RP LD I + Sbjct: 242 -YDMCLTFSRLWNDVCGEAVSSTDHLNPQYEEDPRAATQRPGNCHLDVQ-ATADLGIDVH 299 Query: 278 T------WKEGVRNI 286 W++ + Sbjct: 300 CVLFEEWWRDYLARC 314 >gi|328874735|gb|EGG23100.1| methionine adenosyltransferase regulatory beta subunit [Dictyostelium fasciculatum] Length = 315 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 113/303 (37%), Gaps = 35/303 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-------IIRVGRPD----------IDLLKPKDFA 43 M+ LV G +G + ++ + + R D +DL + Sbjct: 1 MRVLVTGASGLLGRAFMRIAADMAHKQQCQVLGLAFSRYDQYKDQFNLKKVDLCDKEQLR 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 L F P VII+ AA ++ E+ E F++N I+ A +G + IS+DYV Sbjct: 61 QLVLDFKPTVIIHSAAERNLNNCENNKEKTFNLNVSTTEYISDLAKEVGAYILLISSDYV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG S P + T+PL+ YG++K E ILR +Y + S+ Sbjct: 121 FDGTS-PPYTPDAKTHPLSFYGETKRESEVVALKSNPLNKILRVPVLYGQVENLKECSVT 179 Query: 164 RLA-----KERREISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 +A K++ E+ + + Q PT +AR + L + ++ GI+H T + Sbjct: 180 MVANQIINKKKEELVEIDNSQIRYPTLVDNVARVGYDLI-GLGDVTNQLQGGIYHYTGNE 238 Query: 218 GPVSWADFAEY---IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 D A+ I + T+ RP + LD + Sbjct: 239 KMTK-YDMAKAMASIIPSIVDTNTIKPLDNPPITE------PRPHDAQLDLTSTTEALQH 291 Query: 275 RIS 277 + Sbjct: 292 PLP 294 >gi|221212106|ref|ZP_03585084.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] gi|221168191|gb|EEE00660.1| dTDP-4-dehydrorhamnose reductase [Burkholderia multivorans CGD1] Length = 316 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 37/311 (11%) Query: 6 IGNNGQIAQSLSSMCVQDVEI--IRVGRPD-----------------IDLLKPKDFASFF 46 IG +G + +++ + +D I R +D+L F Sbjct: 2 IGASGLLGRAVVASLARDPAFATIATIRNRDTRGARLLALPPDKIAILDVLDRPALERAF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + P ++ AA D E +P A +IN + I A G + ISTDYVFDG Sbjct: 62 DLYRPAAVVVCAAERRPDVCERDPAGARAINVDAPARIGALAARYGAWTLGISTDYVFDG 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL- 165 + P E + NPLNIYG++KL GE + + + +LR +Y ++ L Sbjct: 122 RA-APYREDATPNPLNIYGRTKLEGEAALLAASPLSCVLRLPLLYGPIADWSESAVTSLV 180 Query: 166 -------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + + + PT +A I + H + S+ GI H + D Sbjct: 181 PAIVASARADADAVGMDAWAIRYPTYTPDVAAVIRDLLHRHLAG--ASVLGIRHWSGDEA 238 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + A+ I A+ G + + I T T RP LD ++L + Sbjct: 239 MTK-YEIAQRI----ADALGLRASLAPIDTPADATP--RPYDCHLDAAQLHALGIHHATP 291 Query: 279 WKEGVRNILVN 289 + +R +L + Sbjct: 292 FDTALREVLRD 302 >gi|320586902|gb|EFW99565.1| NAD dependent epimerase dehydratase family protein [Grosmannia clavigera kw1407] Length = 322 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 111/298 (37%), Gaps = 32/298 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP--------DIDLLKPKDFASFFLSFSPDV 53 LV G +G + + + + Q + + G ++L + S PDV Sbjct: 8 VLVTGASGLLGRQVVEVFEQSNWAVTGTGFSRANGKTLIKVNLENSTEVKSALDEVKPDV 67 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 +++ AA DK E++PE +N E + +A+ S GI IYISTDYVF G P Sbjct: 68 VVHCAANRFPDKVENDPEGTRRLNIEASRKLAQLCASRGITLIYISTDYVFPGKPGEAPY 127 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTN-----------NYVILRTAWVYSIFGSN---- 157 + + P N+YG++KL GE V N + VILR +Y Sbjct: 128 EVEAAPAPTNLYGQTKLDGERAVLGVYNEAQQLEKTKKGHAVILRVPVLYGRVEKPAESA 187 Query: 158 ---FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 + + ++ E + + PT+ +AR + IA E D L + + Sbjct: 188 INVLMDIVNKVQAEGVTVKMDDWSIRYPTNTEDVARVLKDIATKYTEAVDADLPPVLQFS 247 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 ++ + + G ++ T + RP L L + Sbjct: 248 SEDRFTK-YEICR---LFAETLGVNIDRLLPDPTGGNTSSIQRPYDCHLSTKALKDLG 301 >gi|266619214|ref|ZP_06112149.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] gi|288869264|gb|EFD01563.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium hathewayi DSM 13479] Length = 293 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 113/295 (38%), Gaps = 21/295 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + +V G NG + + EI ++D+ SF P ++I+ AA + Sbjct: 3 RWMVTGTNGFLGSRIMEYYQDKYEITGANHGNLDITDEGAVTSFVKKARPRLVIHCAAIS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 ++ P ++ ++N +GA +A+A G I++S+D ++ G P E + P Sbjct: 63 NTGTCQENPGLSEAVNVKGAVNLARACRETGSRLIFMSSDQIYAGNRTMEPGKEENTPKP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 +N+YG K E+++ + LR W+Y SN L ++L+ R +++ Sbjct: 123 VNVYGLHKRQAEDEIMAILPEAACLRLPWMYDFPWRGLKSNSNLLGNLLKALIHNRPLTL 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + T A+++ + + E + G+++ G +S + A + Sbjct: 183 PVYDYRGITWAMEVVKHV--------EAAGALPGGVYNF-GGGNTLSTYETAGKVLAMVT 233 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E + A +P +D K+ I EG + Sbjct: 234 EGEDRSGLLIP----DRERYAGQPRNLLMDTEKIRG-FGIIFPDTVEGFQRCFEE 283 >gi|303240147|ref|ZP_07326667.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] gi|302592238|gb|EFL61966.1| dTDP-4-dehydrorhamnose reductase [Acetivibrio cellulolyticus CD2] Length = 283 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 129/291 (44%), Gaps = 21/291 (7%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L++G G++ +L+S + II + ++ + S ++ PD++IN A Sbjct: 1 MKSILLLGERGKVGTALNSELAKSYNIIGKNSENFNVADFEGVTSLIDNYKPDIVINTVA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT-PIDEFSPT 118 +D E PE + IN+ +A+ ++ + ST+ VF E Sbjct: 61 AQGIDDCERNPERSLRINSLYPKLLAELSNKFEFLLVNFSTECVFKDNEPGNFFIEADRP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF--GSNFLLSML-RLAKERREISVV 175 PLN+YG +K G+ V++ + + I R ++ + F+ ML + + ++ V Sbjct: 121 CPLNVYGLTKYGGDCFVSNIAHRHYIFRLPILFGPSNKNNQFVERMLDKALNQGEKLKVS 180 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 CD +P+ ++ IA+A+ +I N + G++H++ + G S D + IF Sbjct: 181 CDVITSPSYSIDIAKAVKEIIENEM------PYGLYHLS-NQGAASIYDLMKEIFSNLEV 233 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 ++ ++ K + + + + L SK+ + + W+E V + Sbjct: 234 E----VELEKVSHKSFQSIGIKNTNTPLKSSKIKS-----LRPWQEAVADY 275 >gi|169776059|ref|XP_001822496.1| NAD dependent epimerase/dehydratase family protein [Aspergillus oryzae RIB40] gi|83771231|dbj|BAE61363.1| unnamed protein product [Aspergillus oryzae] Length = 323 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 113/312 (36%), Gaps = 33/312 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 LV G G + + + + + R + DL D P + Sbjct: 15 VLVTGATGLLGRQVFNTFKHSGCFVVGQGYSRANPPTILKADLENKDDIQRILDEAKPQI 74 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 II+ AA + D E +PE A +N E +A+ A S G IYISTDYVF G P Sbjct: 75 IIHCAANRSPDLCEQDPEKARRVNVEATRTLAEEASSRGAFLIYISTDYVFPGKEGEAPY 134 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFGS------NFLLSML 163 + + TNP N+YG+ K GE V T ++LR +Y + N L+ + Sbjct: 135 ETDAETNPPNLYGQLKRDGEVAVLEATKETGLGLVLRVPVLYGPSDNNSESAVNCLIDAV 194 Query: 164 RLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPV 220 ++ + + PT+ +AR I I+ I +++ Sbjct: 195 WKSQTPESSVKMDDWAQRYPTNTEDVARVCRDIVIKYIKERTRLPQQPHILQFSSEDRMT 254 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-- 278 + E + G P ++ R P RP + L L + I + T Sbjct: 255 K-YEICE---KFAEVLGLPLDRMIRNKQGNEPGGVQRPYDTHLSTKGLKD-LGIDVRTTD 309 Query: 279 ----WKEGVRNI 286 W++ + Sbjct: 310 FVAWWRKHLGAY 321 >gi|115360828|ref|YP_777965.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] gi|115286156|gb|ABI91631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria AMMD] Length = 317 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 127/314 (40%), Gaps = 37/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + +V +D+L Sbjct: 9 ILLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALE 68 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN + I A G + ISTDYV Sbjct: 69 QLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYV 128 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG P E + NPLNIYG++KL GE + + + +LR +Y ++ Sbjct: 129 FDG-KDAPYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLYGPIVDWRESAVT 187 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A I + + S ++ GI H +A Sbjct: 188 SLVPAIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHLAGS--TVTGIRHWSA 245 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + P++ D A+ I A G + + RI T T RP LD +++ Sbjct: 246 EE-PMTKYDIAQRI----AAALGIDAALARIDTPADATP--RPYDCHLDAARVRALGIAH 298 Query: 276 ISTWKEGVRNILVN 289 + + G++ +L + Sbjct: 299 ATPFATGLQAVLRD 312 >gi|320040797|gb|EFW22730.1| NAD dependent epimerase/dehydratase [Coccidioides posadasii str. Silveira] Length = 315 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 82/317 (25%), Positives = 126/317 (39%), Gaps = 39/317 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RP------DIDLLKPKDFASFFLSFSP 51 K LV G +G + + + + +DV VG R DL P + S P Sbjct: 4 KALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPHIVKADLTNPSEIESLLAEVKP 63 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 V+++ AA D+ + P++A +N E A+AKA I IYISTDYVF G Sbjct: 64 QVVVHCAANRFPDQCDAHPDLARKVNVEATKALAKATLQRSILLIYISTDYVFPGRPGEA 123 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFGSNF-------LL 160 P + S T P NIYG++KL GE V T V+LR +Y +N + Sbjct: 124 PYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLYGSADTNSESAVNVLID 183 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI--ENSDTSLRGIFHMTADGG 218 ++ + ++ + PT+ + R IA + + S I +++ Sbjct: 184 AVWKAQAADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKYLGEQERAASFPTILQFSSED- 242 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIR 275 V+ + E + G P S + RI KQ T RP + L L I Sbjct: 243 KVTKYEMCE---RFAEILGLPLSGMERI--KQGGTPGNGVQRPFDTHLSTKALKE-LGIP 296 Query: 276 IST------WKEGVRNI 286 + T W+ +R Sbjct: 297 VDTQDFVSWWRRELRAY 313 >gi|114603289|ref|XP_001146552.1| PREDICTED: methionine adenosyltransferase II, beta isoform 3 [Pan troglodytes] gi|76879702|dbj|BAE45720.1| putative protein product of Nbla02999 [Homo sapiens] Length = 259 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 13/211 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ Q+ + G RP ++LL F P V Sbjct: 30 RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHV 89 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E++P+ A +N + +G +AK A ++G IYIS+DYVFDG P Sbjct: 90 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGT-NPPYR 148 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSMLRLAKER 169 E PLN+YGK+KL GE+ V +LR +Y + S + ++ Sbjct: 149 EEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSN 208 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLI 200 + ++ Q PT +A Q+A + Sbjct: 209 KSANMDHWQQRFPTHVKDVATVCRQLAEKRM 239 >gi|221130220|ref|XP_002155530.1| PREDICTED: similar to methionine adenosyltransferase II, beta [Hydra magnipapillata] Length = 1695 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 73/301 (24%), Positives = 117/301 (38%), Gaps = 22/301 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDI-------DLLKPKDFASFFLSFSPD 52 + ++ G +G + +S+ V + E++ +G + DL +D F PD Sbjct: 1402 RVVISGASGLLGRSIYRELVNNTKWEVLGLGFTRLGGNLHKVDLCNEEDLKRFIEKEKPD 1461 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 V I+ AA D E +N I+K + G +YISTDYVFDG P Sbjct: 1462 VFIHSAAERRPDFVASNKEHTTQLNITSTKIISKLMNQNGGFVLYISTDYVFDGF-NPPY 1520 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF---GSNFLLSMLRLAKER 169 NPLN YG SK GE + NY ILR +Y + + + L K+ Sbjct: 1521 KTTDIPNPLNEYGLSKREGEICILENCTNYGILRVPILYGEVEYLQESAVTGLFELLKDS 1580 Query: 170 REISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + V + + PTS IA QI + S GI+H +++ + + Sbjct: 1581 KTPKKVSNYEQRFPTSTDDIAVVCRQIVEY--NRLNNSFHGIWHWSSNQKMTKY----KI 1634 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + + + RP LDCS L + + + +KE ++ L Sbjct: 1635 VEIMAQVFNLSMKHIEP--DNEPSVGVSRPYDCELDCSNLIDLGIGKQTDFKENIKKYLE 1692 Query: 289 N 289 Sbjct: 1693 K 1693 >gi|294463471|gb|ADE77265.1| unknown [Picea sitchensis] Length = 317 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 126/317 (39%), Gaps = 40/317 (12%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDI-----------------DLLKPKD 41 +V+G +G + QSL+++ +I + DL + Sbjct: 6 VVVVGGSGYLGLHLLQSLATLADNPYDIAFTYHSHLPPPPFFDAIGPLHAFKVDLQSGEG 65 Query: 42 FASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGA--GAIAKAADSIGIPCIYI 98 S + P V++N AA + E P A +IN ++ +D I++ Sbjct: 66 LDSISATLGQPHVVVNCAAISVPRACELNPSAATAINVPRPLIKWMSTFSDRGAPLLIHL 125 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--- 155 STD V++G+ + E TN +N+YGKSK+ E + S ++Y ILR++ +Y Sbjct: 126 STDQVYEGVK-SFYKEDDETNAVNMYGKSKVMAENYICSNFSSYAILRSSIIYGPHPVIP 184 Query: 156 ---SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + + +EI D+F P + I+ + ++ + I Sbjct: 185 VEKTLPIQWIDGVLSSGKEIEFFHDEFRCPIYVKDVVNVILSLIRKW----NSGDKCIQV 240 Query: 213 MTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 + GGP VS AE + S +G S + + PA +D SK+ Sbjct: 241 VLNVGGPDRVSRVQMAEVV---SELKGYDSSSIKSVSAASVNRGVASPADISMDVSKVVK 297 Query: 271 THNIRISTWKEGVRNIL 287 I + +K+GV+ L Sbjct: 298 LLGINPTPFKDGVQLTL 314 >gi|170698254|ref|ZP_02889331.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] gi|170136835|gb|EDT05086.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria IOP40-10] Length = 314 Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 37/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + +V +D+L Sbjct: 6 ILLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPENVARLDVLDQPALE 65 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN + I A G + ISTDYV Sbjct: 66 HLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYV 125 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG + P E + NPLNIYG++KL GE + + + +LR +Y ++ Sbjct: 126 FDGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLYGPIVDWRESAVT 184 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A I + + S ++ GI H + Sbjct: 185 SLVPAIVASARPGADAVGMDAWAIRYPTYTPDVAEVIRDLTLRHLAGS--TVTGIRHWSG 242 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + P++ D A I A G + + RI T T RP LD +++ Sbjct: 243 EE-PMTKYDIARRI----AAALGIDAALARIDTPADATP--RPYDCHLDAARVRALGIAH 295 Query: 276 ISTWKEGVRNILVN 289 + + G++ +L + Sbjct: 296 ATPFATGLQAVLRD 309 >gi|291295470|ref|YP_003506868.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] gi|290470429|gb|ADD27848.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] Length = 283 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 37/300 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR------------VGRPDIDLLKPKDFASFFLS 48 M+ V G G + +L + ++ V +D+ Sbjct: 1 MRVFVTGGTGYLGSTLLRLGSGRPWVLGASYWSQPPAVPGVAWVRLDVRDAAAVEQALKE 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P+V+I+ A Y+ P +I +G +A+A ++G I++STD +FDG Sbjct: 61 FRPEVVIHTA-YSK-----ASPAALEAITVQGTVHVARACRALGARLIHLSTDQLFDG-E 113 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM-LRLAK 167 P E + NPL YG++KL E V + I+RT+ ++ + + M L LA Sbjct: 114 NPPYAESAAPNPLTEYGQAKLRAEHWVQAILPTATIVRTSLIWGLNPLDVTSQMVLELAD 173 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +RE + D++ + +A+A+ ++ GI H+ +S +F Sbjct: 174 GKREGGLFSDEYRSFVYVEDLAQALGELV-------GLDYAGILHL-GGAEVLSRLEFGR 225 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 I + G +++ ++P RP LD S + R+ GVR +L Sbjct: 226 LI---APFHGRDPARLPAQRRAEFPGL--RPGNCALDSSLAQSLLQTRLR----GVREVL 276 >gi|41033609|emb|CAF18471.1| dTDP-4-dehydrorhamnose reductase [Thermoproteus tenax] Length = 277 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 115/298 (38%), Gaps = 39/298 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD-----------IDLLKPKDFASFFLS 48 M+ +V G G + ++ + + V R DL Sbjct: 1 MEVVVTGAGGLLGWWVARELAERGYRVYGVYRERGGGLEGVEWVRADL--EAGVPEVVR- 57 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 DV+++ AAYT VD E + A+ N A +YISTDYVFDG Sbjct: 58 -RADVVVHAAAYTDVDGCEVDRARAYRANFLATL----AVARAARRVVYISTDYVFDG-E 111 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRL 165 R E NP+N YG SKL GE V + V++R + ++ + NF + L Sbjct: 112 RGMYREEDVPNPVNYYGLSKLLGEGPVLA--RGGVVVRVSGLFGVSPHGKRNFGVEALLR 169 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + E+ DQ +PT +A + + +E GI H+ G P + +F Sbjct: 170 LRWGEEVRAFVDQRLSPTYVPFLAERLADLLERDVE-------GIVHIA--GEPATRFEF 220 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + G S V + A RP S LD S+ A+ + + + +E + Sbjct: 221 AVA---LAEALGVDKSLVKPARLSEARLAARRPRDSSLDTSRAASM-GLSLPSLREPL 274 >gi|302911314|ref|XP_003050465.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731402|gb|EEU44752.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 319 Score = 178 bits (453), Expect = 7e-43, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 124/318 (38%), Gaps = 40/318 (12%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD------IDLLKPKDFASFFLSFSPDV 53 LV G G + + +S+ ++ + G R D +DL + AS P V Sbjct: 6 VLVTGATGLLGREVSASFGLRGWNVKGTGYSRADGISTLKVDLSNESEVASLLEETKPQV 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 I++ AA DK + +PE A ++N + ++++ A I IYISTDYVF G P Sbjct: 66 IVHCAAQRFPDKVDKDPEAARALNVAASKSLSQLAVDRDIFVIYISTDYVFPGVPGDAPY 125 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYS------IFGSNFLL 160 + + P N+YG++KL GE V V+LR +Y N L+ Sbjct: 126 EADAEPRPTNLYGQTKLDGERAVLETFAKAGKEGLGVVLRVPVLYGNAETPAESAVNVLM 185 Query: 161 SMLRLAK-ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM--TADG 217 L A+ + E+++ PT+ I R I+ ++ + G+ H+ + Sbjct: 186 DALWKAQTQGIEVNMDHWAIRYPTNTEDIGRVCHDISVKYLDTAPGDRAGLPHILQFSSE 245 Query: 218 GPVSWADFAEY---IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 ++ + + I S E P ++ RP L L + I Sbjct: 246 DRMTKYEIVQLFGDIMDLSTEGIKPNTEGN-----DPNASVQRPYDCHLSTKALRD-LGI 299 Query: 275 RIST------WKEGVRNI 286 +S W+ VR Sbjct: 300 DVSACDFKGWWRREVRAF 317 >gi|320104538|ref|YP_004180129.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644] gi|319751820|gb|ADV63580.1| dTDP-4-dehydrorhamnose reductase [Isosphaera pallida ATCC 43644] Length = 318 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 27/298 (9%) Query: 4 LVIGNNGQIA-QSLSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDVII 55 LV+G +GQI L S+ + + + G +DL + + + P +I Sbjct: 19 LVVGGSGQIGGWLLESLARRGLPAVGTHQTTPAPGTVPLDLGDAQSVEALLVELRPPLIF 78 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI--GIPCIYISTDYVFDGLSRTPID 113 PA +T VD E +P + N +A+ A I + I+ STDYVFDG + P D Sbjct: 79 LPAGFTWVDGCERDPVRCDAANRREPIRLARLASRIVPEVRVIHFSTDYVFDG-AHGPDD 137 Query: 114 EFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFG--SNFLLSMLRLAKERR 170 E + NPL+ YG++KLA E ++ +I+RT WV+ NF + R +E + Sbjct: 138 EEAIPNPLSEYGRAKLAAERELTELLGERLLIIRTTWVFGPERQGKNFAYQVARTLREGK 197 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 + DQ PT + +A A++++A S G+ H+ + +FA Sbjct: 198 PLVCPSDQISNPTYSPDLADAVVELALR-------SAHGLLHLAGPD-RLPRCEFAR--- 246 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH--NIRISTWKEGVRNI 286 + + + T + A RP L +L+ + I + V + Sbjct: 247 RLAQGLNLDPTPIQSKPTAELGQTARRPLNGGLVSRRLSTWFPNHHPIRPLDQAVADF 304 >gi|171320478|ref|ZP_02909509.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] gi|171094289|gb|EDT39365.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MEX-5] Length = 314 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 126/314 (40%), Gaps = 37/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + +V +D+L Sbjct: 6 ILLIGASGLLGRAVAAALSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALE 65 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN + I A G + ISTDYV Sbjct: 66 HLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYV 125 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG + P E + NPLNIYG++KL GE + + + +LR +Y ++ Sbjct: 126 FDGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLYGPIVDWRESAVT 184 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A I + + S S+ GI H + Sbjct: 185 SLVPAIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHLAGS--SVIGIRHWSG 242 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 P++ D A+ I A G + + RI T T RP LD +++ Sbjct: 243 QE-PMTKYDIAQRI----AAALGIDAALARIDTPADATP--RPYDCHLDAARVRALGIAH 295 Query: 276 ISTWKEGVRNILVN 289 + + G++ +L + Sbjct: 296 ATPFATGLQTVLRD 309 >gi|212534970|ref|XP_002147641.1| NAD dependent epimerase/dehydratase family protein [Penicillium marneffei ATCC 18224] gi|210070040|gb|EEA24130.1| NAD dependent epimerase/dehydratase family protein [Penicillium marneffei ATCC 18224] Length = 315 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 108/302 (35%), Gaps = 29/302 (9%) Query: 4 LVIGNNGQIAQSLSSMCVQDV---------EIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 L+ G G + + ++ Q +L P D P V+ Sbjct: 6 LITGATGLLGREVTKSFKQAGWMTVGQGFNRAAPPTILKANLEDPADVKRILDEAKPQVV 65 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPID 113 ++ AA D E PE A IN E A+A+ +S GI IYISTDYVF G P + Sbjct: 66 VHCAANRQPDACEKHPEQARKINVEATRALAEGTNSRGILLIYISTDYVFAGREGEAPYE 125 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIF----GSNFLLSMLRLA 166 + +P N+YG+ K GEE V T ++LR +Y + S + + +A Sbjct: 126 TDAKPSPTNLYGEMKREGEEVVLEITKERGMGIVLRVPVLYGLTEYNGESAVNVILDAIA 185 Query: 167 KERRE---ISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPVS 221 K + + + PT+ + R IA I++ SL I H +A+ Sbjct: 186 KSKDANANLKMDDWARRFPTNTQDVGRVCNDIAVRYIKDKHNIKSLPKILHFSAEEDMTK 245 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN----IRIS 277 + A+ + V RP + L L I+ Sbjct: 246 -YEIAQRLARILGVE--IPGMVANKEGNDPNAAVQRPYNTHLSTKVLKEVGINVQAIKFD 302 Query: 278 TW 279 W Sbjct: 303 DW 304 >gi|321479218|gb|EFX90174.1| hypothetical protein DAPPUDRAFT_299978 [Daphnia pulex] Length = 269 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 21/274 (7%) Query: 2 KCLVIGNNGQIAQS-LSSMCVQDVEIIRV-------GRPDIDLLKPKDFASFFLSFSPDV 53 + ++ G +G + ++ L++ ++ ID+ +F P+ Sbjct: 5 RVVITGASGLLGRAVLAAFKNSQWTVLGTSFSRTGEDLVSIDICNHAKTEELIRNFMPNC 64 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA DK + + + +N E +A A +G IYISTDYVFDG P Sbjct: 65 IVHCAAQRFPDKVDKDLDGTIRLNVEATKNLAVLAAKLGATMIYISTDYVFDGTK-PPYS 123 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERR 170 E NPLN YGK+KL GE+ + ++++LR +Y + + +L+L + Sbjct: 124 ETDTPNPLNTYGKTKLQGEQVTLESSQDHIVLRVPVLYGPVEYIGESAVTVLLQLLFDSE 183 Query: 171 EISVVCD-QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 +V D + P+ IA +++ ++ ++ ++GIFH + I Sbjct: 184 SNKLVSDSEIRYPSHVDDIAFICVKLLE--LKQTNADVKGIFHWGGKESMTK-YGMVQDI 240 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 ++ P S + + A RP + L Sbjct: 241 ---ASVFQLPMSHISPDPNQS--QGASRPHNAQL 269 >gi|171693893|ref|XP_001911871.1| hypothetical protein [Podospora anserina S mat+] gi|170946895|emb|CAP73699.1| unnamed protein product [Podospora anserina S mat+] Length = 317 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 110/293 (37%), Gaps = 29/293 (9%) Query: 5 VIGNNGQIAQS-LSSMCVQDVEIIRVG--RPD------IDLLKPKDFASFFLSFSPDVII 55 V G G + + L + D + G R D +DL + P V++ Sbjct: 8 VTGATGLLGRQVLKAFANNDWTVKGTGFSRADGTDILKVDLTNADELKKVLDDVKPQVVV 67 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDE 114 + AA DK + +PE ++N E +A+ GI YISTDYVF G P + Sbjct: 68 HSAANRFPDKVDKDPEGTRALNVEAPRTLARLCAERGILLTYISTDYVFPGKPGDAPYEN 127 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSN-------FLLS 161 + P N+YG++KL GE V V+LR +Y SN + S Sbjct: 128 NAEPAPTNLYGQTKLEGERAVLHEFKMAGKEGLGVVLRVPVLYGSAKSNAESAVNVLMDS 187 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPV 220 +L+ +E I++ PT+ I R + IA +E SD SL I +++ Sbjct: 188 VLKAQQEGANINMDHWALRYPTNTEDIGRVLKDIAAKYLETSDRNSLPRILQFSSEDKYT 247 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIF-TKQYPTKAHRPAYSCLDCSKLANTH 272 + + + G P ++ RP L L + Sbjct: 248 K-YEICQ---LFAEINGLPIDRIKPNTEGNDPNASVQRPYDCHLSTKALKDLG 296 >gi|172065131|ref|YP_001815843.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] gi|171997373|gb|ACB68290.1| dTDP-4-dehydrorhamnose reductase [Burkholderia ambifaria MC40-6] Length = 314 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 37/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG-------------------RPDIDLLKPKDFA 43 L+IG +G + +++++ ++ + +V +D+L Sbjct: 6 ILLIGASGLLGRAVAASLSRESSLTQVATIRNPDTAGARRLALPPDNVARLDVLDQPALE 65 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN + I A G + ISTDYV Sbjct: 66 HLFDTRRPAAVIICAAERRPDVCERDPAAARAINVDAPARIGALAARYGAWTLGISTDYV 125 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG + P E + NPLNIYG++KL GE + + + +LR +Y ++ Sbjct: 126 FDGTA-APYREDAAPNPLNIYGRTKLEGEAALLAASPLACVLRLPLLYGPIVDWRESAVT 184 Query: 164 RL-----AKER---REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 L A R + + PT +A I + + S ++ GI H +A Sbjct: 185 SLVPAIVASARPGADAVGMDAWAIRYPTYTPDVAAVIRDLTLRHLAGS--TVTGIRHWSA 242 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + P++ D A+ I A G + + RI T T RP LD +++ Sbjct: 243 EE-PMTKYDIAQRI----AAALGIDAALARIDTPADATP--RPYDCHLDAARVRALGIEH 295 Query: 276 ISTWKEGVRNILVN 289 + + G++ +L + Sbjct: 296 ATPFATGLQVVLRD 309 >gi|330948044|ref|XP_003307046.1| hypothetical protein PTT_20367 [Pyrenophora teres f. teres 0-1] gi|311315164|gb|EFQ84873.1| hypothetical protein PTT_20367 [Pyrenophora teres f. teres 0-1] Length = 318 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 77/309 (24%), Positives = 118/309 (38%), Gaps = 37/309 (11%) Query: 4 LVIGNNGQIAQSLSS-MCVQDVEIIRVG-----RPD---IDLLKPKDFASFFLSFSPDVI 54 LV G +G + + + + + + G PD +++L KD + PDV+ Sbjct: 5 LVTGASGLLGRQVQREFLLDGWKSVGTGLSRITSPDVIRLNILNEKDIETVLDDTKPDVV 64 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPID 113 ++ A D PE A +N + + A+A+A S GI IYISTDYVF G P Sbjct: 65 VHCAGNRFPDSCTANPEAARKLNVDSSRALAEATTSRGIFLIYISTDYVFPGRPGDAPYK 124 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYS------IFGSNFLLS 161 S +P N YG++KL GE V V+LR +Y N L+S Sbjct: 125 IDSTPSPPNFYGQTKLEGEHAVLDVARKAGAKNKVVVLRVPILYGSCDEPKESAVNILMS 184 Query: 162 MLRLAKERRE----ISVVCDQFGTPTSALQIARAIIQIAHNLIE--NSDTSLRGIFHMTA 215 L A++ +E I V PT+ + R IA ++ N+D L I ++ Sbjct: 185 QLWNAQQIQESQPKIQVDDYALRYPTNTQDVGRVCRDIAKLYLDPVNADRELPEILQFSS 244 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYR-IFTKQYPTKAHRPAYSCLDCSKLANTHN- 273 + W + + G P + + RP LD S L Sbjct: 245 EDRMTKW----QICQNFADIMGLPLDNMAPFKPDAEPKDGTIRPYDCHLDTSALKELGID 300 Query: 274 ---IRISTW 279 + W Sbjct: 301 VSTVDFRAW 309 >gi|71022409|ref|XP_761434.1| hypothetical protein UM05287.1 [Ustilago maydis 521] gi|46101303|gb|EAK86536.1| hypothetical protein UM05287.1 [Ustilago maydis 521] Length = 1249 Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 33/317 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPD-------IDLLKPKDFASFFLSFS 50 MK L+ G +G + +++ C+ D + + + R D +DL + Sbjct: 1 MKVLITGASGLLGRAVHQHCIDKGYDSKALALTRSDPSKQLVKLDLTDTAAVELCLREYQ 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD--SIGIPCIYISTDYVFDGLS 108 PD+I++ AA D E +P + +IN + +IA A + ISTDYVFDG Sbjct: 61 PDLIVHTAAERRPDVVEKDPAASHAINVDAPASIATLASQLENAPLLVNISTDYVFDGSK 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN--YVILRTAWVYSIFGSNFLLSMLRLA 166 P NPLN YG SKL GE VAS+ + LR +Y +N ++ L Sbjct: 121 -PPYTVDDAPNPLNAYGVSKLQGERAVASHAKPGYFTNLRVPVLYGKTITNDESAVNVLL 179 Query: 167 KERREI-------SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 + PT+ +A+AI+++A + S I H +A Sbjct: 180 NAIQPPPGSTDLQKCDAYAVRYPTNVQDVAKAILKLAEVHTDTSRPLPP-ITHFSAKEAM 238 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQY---PTKA-HRPAYSCLDCSKLANTHNIR 275 D + A G ++ + +Y P A RP + LD S L + + Sbjct: 239 TK-YDM-CMVLSRIANSVGFETR-TDLLDPEYQVDPMAATARPRHCKLDTSVLEE-YGVP 294 Query: 276 I--STWKEGVRNILVNI 290 + +++++ R L + Sbjct: 295 VEYTSFEDWWRPYLAEL 311 >gi|297810115|ref|XP_002872941.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297318778|gb|EFH49200.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 323 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 122/316 (38%), Gaps = 35/316 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-----VEIIRVGRPD-----------------IDLLKP 39 K +++G G + Q L + ++ +DL Sbjct: 5 KVVIVGGTGFLGQHLLQAFAGNNGGDLYDVAFTHHSSPLPRRLLDAFPHFPAFSVDLKSG 64 Query: 40 KDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPCIY 97 F S F PDV++N AA + E +P+ A SIN + + I+ Sbjct: 65 LGFNSISQDFGQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSTFERNKTLLIH 124 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +STD V++G+ + E T +N+YGKSK+A E + N+ ILR++ + + Sbjct: 125 LSTDQVYEGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQNFAILRSSIIVGPQTVS 183 Query: 158 FLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 L L + K+ + D+F P + +++ + + + ++ + Sbjct: 184 PLPKTLPIQWIDSSLKKGDTVEFFHDEFRCPIYVKDLVNITLKLIDRWVVSDEKQMQLVL 243 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 + +S A+ + + RG S + + PA +D +KL T Sbjct: 244 N-AGGPERLSRVQMAQVV---AEVRGYDMSLIKHVSASSVDRGVVSPADISMDITKLIQT 299 Query: 272 HNIRISTWKEGVRNIL 287 I +++K+GVR L Sbjct: 300 LEITPTSFKDGVRLTL 315 >gi|134291975|ref|YP_001115744.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] gi|134135164|gb|ABO59489.1| dTDP-4-dehydrorhamnose reductase [Burkholderia vietnamiensis G4] Length = 317 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 126/315 (40%), Gaps = 39/315 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV--EIIRVGR-----------------PDIDLLKPKDFA 43 L+IG +G + +++++ ++ ++ R +D+L Sbjct: 9 ILLIGASGLLGRAVAAALSREASLTLVATIRNADTAGARRVALPPEHTARLDVLDQPALE 68 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F + P +I AA D E +P A +IN + I A G + ISTDYV Sbjct: 69 RLFDARRPSAVIVCAAERRPDVCESDPSAARAINVDAPARIGALAARYGAWTLGISTDYV 128 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF----- 158 FDG + P E + NPLN+YG++KL GE + + + +LR +Y Sbjct: 129 FDGRA-APYREDATPNPLNVYGRTKLDGEAALLAASPLACVLRLPLLYGPIVDWRESAVT 187 Query: 159 --LLSMLRLAKER-REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + +++ A+ + PT +A+ I + + + GI H +A Sbjct: 188 SLVPAIVAAAQPGAEPARMDAWAIRYPTYTPDVAQVIRDLTLRHLAG--APVTGIRHWSA 245 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNI 274 + P++ D A+ A G + + I PT A RP LD S++ Sbjct: 246 EE-PMTKYDIAQ----RLAAALGRRAALAPIHA---PTDATPRPYDCHLDASRVRALGID 297 Query: 275 RISTWKEGVRNILVN 289 + + G+R +L + Sbjct: 298 HATPFDAGLRAVLAD 312 >gi|255541506|ref|XP_002511817.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis] gi|223548997|gb|EEF50486.1| dtdp-4-dehydrorhamnose dehydrogenase, putative [Ricinus communis] Length = 318 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 121/316 (38%), Gaps = 36/316 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD------------------IDLLKP 39 K LV+G G + Q L + ++ + +DL Sbjct: 6 KVLVVGGTGYLGQHLLQGLSEIEDSPYDLAFTHHSNSTPPQPLLDAVRHSPSFHVDLQTG 65 Query: 40 KDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPCIY 97 F + F PDV++N AA + E +P A SIN + + I+ Sbjct: 66 DGFQAITHEFGQPDVVVNCAAISLPRACEKDPATAMSINIPSSLVNWLSTFEGRDTLLIH 125 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF--- 154 +STD V++G+ + E P+N+YGKSKL E+ ++ N+VILR++ ++ Sbjct: 126 LSTDQVYEGVK-SFYKEEDEAVPVNVYGKSKLEAEKFISERCLNFVILRSSIIFGPQTIS 184 Query: 155 ---GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 S + + + + +I D+F P + I+ + + I S++ + Sbjct: 185 PVPKSLPIQWIDSVLSKGEQIEFFHDEFRCPVYVKDVVAVILSLTNRWI--SESKQMQLL 242 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 VS AE + + RG + + + PA ++ S++ Sbjct: 243 LNVGGPDRVSRVQMAEAV---ADIRGYNSALIKSVSAASVDRGVLSPADISMNISRIVRE 299 Query: 272 HNIRISTWKEGVRNIL 287 + + ++ GV+ L Sbjct: 300 LHFSPTPFRHGVKLTL 315 >gi|30678677|ref|NP_191965.2| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] gi|332656499|gb|AEE81899.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 327 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 123/318 (38%), Gaps = 38/318 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVGRP-----------------DIDLL 37 K L++G G + Q L + ++ +DL Sbjct: 6 KVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAFPVDLK 65 Query: 38 KPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPC 95 S F PDV++N AA + E +P+ A SIN + + ++ Sbjct: 66 SGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLL 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I++STD V+ G+ + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 126 IHLSTDQVYQGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQT 184 Query: 156 SNFLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + L L + K+ + D+F P + ++ + + D +R Sbjct: 185 VSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSD-DKQMRL 243 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + + +S A+ + + RG S + + PA +D +KL Sbjct: 244 VLN-AGGPERLSRVQMAQMV---AEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLI 299 Query: 270 NTHNIRISTWKEGVRNIL 287 +T + +++KEGVR L Sbjct: 300 HTLELSPTSFKEGVRLTL 317 >gi|310792470|gb|EFQ27997.1| RmlD substrate binding domain-containing protein [Glomerella graminicola M1.001] Length = 317 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 108/295 (36%), Gaps = 29/295 (9%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD------IDLLKPKDFASFFLSFSPDV 53 +V G G + + ++ +Q + G R D +DL + F P V Sbjct: 6 VVVTGATGLLGRQVARAFDLQGWSVKGTGYSRADGVSVFKVDLGDTAEVEKFLDESKPQV 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 +++ AA DK + +P+ A ++N ++AK + IYISTDYVF G P Sbjct: 66 VVHCAAQRFPDKVDSDPDAARALNVAATKSLAKLCAARSTLLIYISTDYVFSGKPGEAPY 125 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYS------IFGSNFLL 160 + +PT P N+YG++KL GE V ++LR +Y +N L+ Sbjct: 126 EADAPTGPTNLYGQTKLDGELAVLEEYKAAGCEGLGLVLRVPVLYGKADTPAESATNILM 185 Query: 161 SMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 L ++ + + + PT+ + R IA +E D S + Sbjct: 186 ETLWKTQDGQSKVKMDHWAIRYPTNTEDVGRVCHDIAVKYLEAGDRSSMPKVLQFSSEDK 245 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTK--QYPTKAHRPAYSCLDCSKLANTH 272 ++ + + F E T+ RP L L Sbjct: 246 MTKYEICQK-FAEIMSLSMDGIIAN---TEGNDPNASVQRPYDCHLSTRALKELG 296 >gi|210622691|ref|ZP_03293313.1| hypothetical protein CLOHIR_01261 [Clostridium hiranonis DSM 13275] gi|210154092|gb|EEA85098.1| hypothetical protein CLOHIR_01261 [Clostridium hiranonis DSM 13275] Length = 290 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 26/300 (8%) Query: 1 MK--CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 MK LV G G IA + + I++ R D D P + F S D+ ++ A Sbjct: 1 MKKTILVTGARGYIASYIQNNNKDKFNWIKMTRDDADFSNPDEVEKFVKSQEFDICLHTA 60 Query: 59 AY--TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEF 115 A TAV E+ PE+A +IN E I A G I+ ST+ +F+G P E Sbjct: 61 ANATTAV--CEENPELAANINVESTKRIVDACKEKGARLIFCSTEQIFNGKENHGPFKED 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF------LLSMLRLAKER 169 + +YG++K+ E+ + + VILR +W+ + + + ++L + Sbjct: 119 EEPKAVTVYGQNKIDCEKYINDSGVDAVILRFSWMMGLSFAGVKASPSIVKNVLNAIMYQ 178 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 + C++ T A +A +IA G++H+ + + + A ++ Sbjct: 179 KPTLFTCNERRCMTYAKHLAEQFDKIAEL--------PAGVYHVASSNDMTT-YESACFV 229 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 E K T++Y R LD SKL I+ +K VR IL + Sbjct: 230 AKEMGITEENIEKYILPNTERYSD---RFRDYRLDSSKLEEM-GIKFGDFKSDVREILKD 285 >gi|330945654|gb|EGH47135.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. pisi str. 1704B] Length = 133 Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 5/133 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L + A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGTDGLCGDLADLERLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A+ A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLAREAAALGAWLIHYSTDYVFDGSGEEQWQES 120 Query: 116 SPTNPLNIYGKSK 128 +PT PL++YG+SK Sbjct: 121 APTGPLSVYGRSK 133 >gi|193214981|ref|YP_001996180.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] gi|193088458|gb|ACF13733.1| dTDP-4-dehydrorhamnose reductase [Chloroherpeton thalassium ATCC 35110] Length = 300 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 122/312 (39%), Gaps = 38/312 (12%) Query: 2 KCLVIGNNGQIA-----QSLSS--------MCVQDVEIIRVGRPD-----IDLLKPKDFA 43 K L+ G +G + +L++ D + R D +D+ Sbjct: 3 KVLLTGASGLLGGNILKHALANKTLDILPTRLGGDFSVPEAFRGDKEILPLDIRSQTWLW 62 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + + P+VII+ AA + E + E A +IN IA + GI I+ISTD V Sbjct: 63 NIISQWKPEVIIHTAALSEPGACEWQRETAEAINTRAVKFIADLCEHFGIRLIFISTDLV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 FDG E P NPLN Y ++K EE VAS ++YVILRT+ + + Sbjct: 123 FDGTK-GDYLETDPPNPLNFYAETKCRAEEIVASSLHDYVILRTSLLLGASPQSLRSLDE 181 Query: 164 RL---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 RL + + ++ D++ P +A + I L ++ S+ G+FH V Sbjct: 182 RLKADGEAGKTMTFFTDEYRNPIAAS----VLADITLKLASGNNRSVTGLFHAAGKD-KV 236 Query: 221 SWADFAEYIFWE--SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 S + E + + + + ++ + RP + L L N + Sbjct: 237 SRFELGEKLCQKYGISRQFYKGARQDEVTLS-----VPRPKDTSLISDALLTVMNFPMP- 290 Query: 279 WKEGVRNILVNI 290 + ++ + Sbjct: 291 ---SLDEMITAL 299 >gi|170696619|ref|ZP_02887739.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] gi|170138485|gb|EDT06693.1| dTDP-4-dehydrorhamnose reductase [Burkholderia graminis C4D1M] Length = 306 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 29/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI----IRVGRP-----DIDLLKPKDFASFFLSFSPD 52 K VIG +G + +++ + RP +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRAIVDELARQPTWQVVGTAFSRPAPDTVPLDVRDSRAIEQFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E +PE+A ++N + AIA AA G + ISTDYVFDG P Sbjct: 63 ALVIAAAERRPDVCERQPELARALNVDAVRAIAAAAQRRGAWTLSISTDYVFDGT-HPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL------- 165 S PLN YG+SKL GE + + T+ +LR +Y ++ L Sbjct: 122 RPDSAPAPLNAYGRSKLEGEHALTATTDFGCVLRLPLLYGPIVDWAESAVTSLVPAIAAS 181 Query: 166 -AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + S+ PT +A I Q+ + ++RGI H + D P++ + Sbjct: 182 ASAHGQPASMDAWAIRYPTFTPDVAFVIRQMLERHAAGN--AIRGIVHWSGDE-PMTKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + AE + + T PT A RP L +L R + + + Sbjct: 239 IAVRL----AEALQLDAHLTPQHT---PTDATPRPHNCHLASERLEELGIGRRTPFDTAI 291 Query: 284 RNILV 288 R +L Sbjct: 292 REVLA 296 >gi|223937614|ref|ZP_03629517.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] gi|223893777|gb|EEF60235.1| dTDP-4-dehydrorhamnose reductase [bacterium Ellin514] Length = 282 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 27/286 (9%) Query: 4 LVIGNNGQIAQSLSS---MCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 + G NG I + + + + + RPD DL + + F P ++I+ AA Sbjct: 5 WITGANGLIGNYILRTSALYAKGWDARGITRPDFDLCEFEAVKRAFTEQKPQLVIHCAAL 64 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 + + P +A +N E +A A+ IP ++ STD VFDG + DE + NP Sbjct: 65 SKSPACQANPLLARKVNIEVTKHLAGLAE--NIPFLFFSTDLVFDGRAGN-YDEAAAVNP 121 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG---SNFLLSMLRLAKERREISVVCD 177 L++Y ++K+A EE V N+ ++RT+ F M R + + +++ D Sbjct: 122 LSVYAETKVAAEEFVLG-NPNHTVIRTSLNGGTSPTGDRGFNEEMRRAWQAGKTLNLFTD 180 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER- 236 + +P A+ ARA+ ++ G++H+ W I A R Sbjct: 181 ELRSPIPAIITARAVWELV-------SAQKPGLYHIAGSERMSRWQ-----IGEVMAARW 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS---TW 279 + K+ + Y A R + L+C+K + + W Sbjct: 229 PHLHPKIQPGSLRDY-QGAPRAPDASLNCAKAQALLSFPLPGLNDW 273 >gi|156050135|ref|XP_001591029.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980] gi|154692055|gb|EDN91793.1| hypothetical protein SS1G_07654 [Sclerotinia sclerotiorum 1980 UF-70] Length = 315 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 112/295 (37%), Gaps = 30/295 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRP--------DIDLLKPKDFASFFLSFSPD 52 K L+ G G + + + + ++ ++ G DL + + P Sbjct: 4 KALITGATGLLGRQVLKVFDRENWNVVGTGFSRAKPPTILKADLASESEVSKVLDESKPQ 63 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTP 111 V+I+ AA DK +++PE ++N + ++AK + I IYISTDYVF G P Sbjct: 64 VVIHCAANRFPDKCDNDPEGTRALNIAASASLAKLCAAQSILLIYISTDYVFPGTEGDAP 123 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFGSN-----FLL 160 + P N+YG++K GE+ V + V+LR +Y L+ Sbjct: 124 YETSHSPKPPNLYGETKYEGEKAVLAEYEKAGKSGLGVVLRVPVLYGEGEPEESAIGVLI 183 Query: 161 SMLRLAKERRE-ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL-RGIFHMTADGG 218 + + A+E+ + + PT+ I R + IA +E+ + S I +++ Sbjct: 184 NSVWKAQEKDANVKMDHWAIRYPTNTEDIGRVLSDIAIKYLESKEPSSLPRILQFSSEDK 243 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTK--QYPTKAHRPAYSCLDCSKLANT 271 + I AE G T+ RP L L + Sbjct: 244 YTKY-----EICQLFAEILGLPLDGMVANTEGNDPNASVQRPYDCHLSTKALKDL 293 >gi|266631105|emb|CBH32105.1| putative NDP-hexose 4-ketoreductase [Streptomyces albaduncus] Length = 302 Score = 174 bits (443), Expect = 8e-42, Method: Composition-based stats. Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 43/274 (15%) Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP 94 D+ + + PDV++N A +T VD E +P A+ +NA GA +A+A +G Sbjct: 34 DITRAAGTERLMRAVRPDVVVNAAVFTGVDPCEADPARAYEVNAVGARHVARACADVGAR 93 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF 154 C+YISTDYVFDG + P DE +P PL YG SKLAGE + + + ++++RTA ++ Sbjct: 94 CVYISTDYVFDGTAPDPYDETAPPRPLLTYGMSKLAGEGETLNASPGHLVVRTAALFGPP 153 Query: 155 GSN------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + F+ +LR A + V +PT +AR ++++ + Sbjct: 154 PPSHRRRPGFVEQILRRAAAGQRADVTDALVMSPTYTADLARMVVELLAADADG------ 207 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGP-------------YSKVYRIFTKQYPTKA 255 G +H+T + G +W A P + + + P + Sbjct: 208 GPYHVTNE-GSATWYGLAHAAVSGLGLGALPRQAAPGAGAAGPARPAATPLTSVRLPPRV 266 Query: 256 HRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 R L+ W++ + L + Sbjct: 267 RR-----LN------------RPWRDALAEFLRD 283 >gi|302385086|ref|YP_003820908.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] gi|302195714|gb|ADL03285.1| NAD-dependent epimerase/dehydratase [Clostridium saccharolyticum WM1] Length = 300 Score = 174 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 118/278 (42%), Gaps = 20/278 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K +V G+ G + +++ ++ +++ VG D+D+ + + + + +PDV+I+ AA + Sbjct: 4 KLMVTGSQGFLGGRIAAYYEKNYDVVPVGHRDLDITEEAAVSEYIKNKNPDVVIHCAAVS 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 +++PE++ ++N +GA IAKA G +++S+D ++ G + P E Sbjct: 64 NTGVCKEKPELSEAVNRKGAVNIAKACRETGSTMLFMSSDQIYGGSRKKGPNKESDEVPL 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 +N+YG K E+++ + + LR W+Y SN L ++LR + I + Sbjct: 124 INVYGAHKKQAEDEILHILPDGICLRLTWMYDFPVRGLKSSSNLLTNLLRSMVQNSPIRL 183 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 + T A ++ + E + GI++ +S + +F Sbjct: 184 SIYDYRGITWAQEVVANL--------EPAMNLPGGIYNF-GSESTLSAYEIGSRVFHMLD 234 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + G V T P +D KL Sbjct: 235 KAGNRGKFVIPDETGDKDN----PRNLTMDIGKLKAHG 268 >gi|309789989|ref|ZP_07684565.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] gi|308228009|gb|EFO81661.1| dTDP-4-dehydrorhamnose reductase [Oscillochloris trichoides DG6] Length = 293 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 117/302 (38%), Gaps = 38/302 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR-------------VGRPDIDLLKPKDFASFFLS 48 + + G G + +L + V +DL +P++ + + Sbjct: 4 RIFITGGTGYLGTALLRQLELRAAHVGASYLHQPPTAFPNVAWVRMDLREPEEVRAILHA 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 F P II+ A V EP++ +I G+G IA+ A S+G I++S+D +FDG Sbjct: 64 FQPTAIIHTA---FVQY---EPDL-LAITGYGSGLIAEIAASLGARLIHMSSDVIFDGER 116 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAK 167 P E NP++ YG++K E V + ++RT+ +Y L +A Sbjct: 117 TGPYTENDAPNPISAYGEAKALAERLVQAAYPAATLVRTSLIYGFAPIDRQTRFALEIAA 176 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 +R + D++ P +A LIE +T G+ ++ VS + Sbjct: 177 GQRSDRLFSDEYRCPIFVDD-------LAAALIELLNTEHTGVLNIAG-AERVSRYELGC 228 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G ++ + + P RP LD S+ + R+ GVR +L Sbjct: 229 ---LLAQALGYNPDQIQAGRSAELP--VRRPRNCSLDISRAQALLHTRLR----GVREVL 279 Query: 288 VN 289 Sbjct: 280 AE 281 >gi|110736655|dbj|BAF00291.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis thaliana] Length = 327 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 122/318 (38%), Gaps = 38/318 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVGRP-----------------DIDLL 37 K L++G G + Q L + ++ +DL Sbjct: 6 KVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAFPVDLK 65 Query: 38 KPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPC 95 S F PDV++N AA + E +P+ A SIN + + ++ Sbjct: 66 SGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLL 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I++STD V+ G+ + E T +N+YGKSK+A E + ++ IL ++ ++ Sbjct: 126 IHLSTDQVYQGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILGSSIIFGPQT 184 Query: 156 SNFLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + L L + K+ + D+F P + ++ + + D +R Sbjct: 185 VSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSD-DKQMRL 243 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + + +S A+ + + RG S + + PA +D +KL Sbjct: 244 VLN-AGGPERLSRVQMAQMV---AEVRGYDLSLIKHVSASSIDRGVVSPADISMDITKLI 299 Query: 270 NTHNIRISTWKEGVRNIL 287 +T + +++KEGVR L Sbjct: 300 HTLELSPTSFKEGVRLTL 317 >gi|189210066|ref|XP_001941365.1| methionine adenosyltransferase 2 subunit beta [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977458|gb|EDU44084.1| methionine adenosyltransferase 2 subunit beta [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 385 Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 127/323 (39%), Gaps = 49/323 (15%) Query: 4 LVIGNNGQIAQSLSS-MCVQDVEIIRVG-----RPD---IDLLKPKDFASFFLSFSPDVI 54 LV G +G + + + + + + G PD +D+L K+ + + PDV+ Sbjct: 62 LVTGASGLLGRQVQREFLLDGWKSVGTGLSRIASPDVVRLDILNEKEIETVLDNTKPDVV 121 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPID 113 ++ AA D PE A +N + + A+A+A S I IY+STDYVF G P + Sbjct: 122 VHCAANRFPDSCTANPEAARKLNVDSSRALAEATTSRDIFLIYLSTDYVFSGRPGDAPYN 181 Query: 114 EFSPTNPLNI---------YGKSKLAGEEKVASYTNNY------VILRTAWVYS------ 152 S +P N+ YG++KL GE+ V V+LR +Y Sbjct: 182 TDSTPSPPNLVEGAHSNLRYGQTKLEGEQAVLDVARKAGTKNQVVVLRVPILYGSCDEPK 241 Query: 153 IFGSNFLLSMLRLAKE----RREISVVCDQFGTPTSALQIARAIIQIAHNLIE--NSDTS 206 N L+S L A++ + ++ V PT+ + R IA ++ N+D Sbjct: 242 ESAVNILMSQLWSAQQIQDSQPKVQVDDYALRYPTNTQDVGRVCRDIAKLYLDPVNADRE 301 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI-FTKQYPTKAHRPAYSCLDC 265 L GI +++ W + + G P + + RP LD Sbjct: 302 LPGILQFSSEDRMTKW----QICQTFADIMGLPLDNMAPSKPDAEPKDGTIRPYDCHLDT 357 Query: 266 SKLANTHNIRIST------WKEG 282 S L I +ST W+ Sbjct: 358 SALKE-LGIDVSTVDFRAWWRVA 379 >gi|323525478|ref|YP_004227631.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] gi|323382480|gb|ADX54571.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1001] Length = 306 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 124/305 (40%), Gaps = 29/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRV--GRPD-----IDLLKPKDFASFFLSFSPD 52 K V+G +G + +++ D +++ RP +D+ + + F +PD Sbjct: 3 KVAVMGASGLLGRAIVDELAGQPDWQVVGTAFSRPTPNTVVLDVREARAIEQFIDREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E PE+A ++N + AIA AA G + ISTDYVFDG R P Sbjct: 63 ALVIAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLSISTDYVFDGT-RPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--------FLLSMLR 164 S PLN YG+SKL GE +A+ T+ +LR +Y Sbjct: 122 RPDSEPAPLNAYGRSKLEGERALAAATDFGCVLRLPLLYGPIVDWAESAVTSLVPAIAAS 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 A + + PT +A I Q+ + + ++ GI H + D P++ + Sbjct: 182 AAAGGKAAPMDAWAIRYPTFTPDVAFVIRQMLERHAKGN--AICGIVHWSGDE-PMTKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + E +++ T PT A RP L +L R + + + Sbjct: 239 IAVRL----GEALQLDARLTPQHT---PTDATPRPHNCHLASDRLEQFGIGRRTPFDTAI 291 Query: 284 RNILV 288 R +L Sbjct: 292 REVLA 296 >gi|239626739|ref|ZP_04669770.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516885|gb|EEQ56751.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 295 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 121/297 (40%), Gaps = 23/297 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G NG + LS + E + V ++++ ++F + PD +++ A Sbjct: 4 RILITGANGFLGSRLSEYFRKIDGYETLGVSHRELEVSDSLAVSAFIKAIRPDYVLHCAG 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPT 118 + E EPE + IN G +AKA G +++S+D +++ S P E P Sbjct: 64 VSNTAACEKEPERSEQINVRGTSNMAKACRQSGSRMVFMSSDQIYNASDSMEPNREEGPH 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR------LAKERREI 172 P ++YG+ K EE + + ++ V LR W+Y S+ +E R + Sbjct: 124 RPCSVYGRDKKRAEEAMLTCLHDAVALRLTWMYDYPSSDRPGGCGLLGSLLDARRENRIL 183 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + + T ++ R + E + G+++ + + D A +F + Sbjct: 184 KLPVHDYRGITYVWEVIRNM--------EAAMRLPGGVYNFGSQNSRST-FDTA-ALFLK 233 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + S + T+++ A P +D ++ I I +EG+R L + Sbjct: 234 AVTGSSDVSGLIERDTERF---ASCPRNLMIDTERIRRQ-GICIGDTQEGIRTCLAD 286 >gi|325963884|ref|YP_004241790.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans Sphe3] gi|323469971|gb|ADX73656.1| dTDP-4-dehydrorhamnose reductase [Arthrobacter phenanthrenivorans Sphe3] Length = 482 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 93/282 (32%), Positives = 140/282 (49%), Gaps = 18/282 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV+G +GQ+ ++L + D GR D DL F++ + IIN AAYT Sbjct: 191 KTLVVGADGQLGKALRKLYEGDSSFEFAGRGDFDLASDSAFSTMSWK-NYSTIINAAAYT 249 Query: 62 AVDKAEDE--PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 AVD AE + A+S+N +A+ A + +++S+DYVFDG + DE Sbjct: 250 AVDAAETDAGRAAAWSVNVAAVARLARVAVEYNLTLVHVSSDYVFDGTATR-HDEAEIFT 308 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL +YG++K AG+ V S + I+RT+WV G+NF+ +M LA E SVV DQF Sbjct: 309 PLGVYGQTKAAGD-AVVSVVPRHYIVRTSWVIGE-GNNFVRTMAALAGRGIEPSVVNDQF 366 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G + IA I + + + G ++++ DG P SWAD A ++ G Sbjct: 367 GRLSFTEDIASGIRHLLES------GADYGTYNLSNDGPPQSWADIASDVYELV---GRS 417 Query: 240 YSKVYRIFTKQY---PTKAHRPAYSCLDCSKLANTHNIRIST 278 + V + T++Y A RP S L +KL +T + T Sbjct: 418 RASVTGVSTEEYFRDKAAAPRPRNSVLTLTKLKSTGFVPPPT 459 >gi|307730301|ref|YP_003907525.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] gi|307584836|gb|ADN58234.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. CCGE1003] Length = 307 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 76/305 (24%), Positives = 127/305 (41%), Gaps = 29/305 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRV--GRPD-----IDLLKPKDFASFFLSFSPD 52 K VIG +G + +++ + + +++ RP +D+ + F +PD Sbjct: 3 KVAVIGASGLLGRAVMNELAKQPAWQVVGTAFTRPAPNTVALDVRDSRAVEKFVEREAPD 62 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 ++ AA D E PE+A ++N + AIA AA G + ISTDYVFDG SR P Sbjct: 63 ALVVAAAERRPDVCERHPELARALNVDAVRAIAAAAHRRGAWTLSISTDYVFDG-SRPPY 121 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--------FLLSMLR 164 + PLN YG+SKL GE + T+ +LR +Y Sbjct: 122 RPDAEPAPLNAYGRSKLEGERALTGATDFGCVLRLPLLYGPIVDWAESAVTSLVPAIAAS 181 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + + + + P+ +A I Q+ +E + ++RGI H + D P++ + Sbjct: 182 VGAQGKAAHMDAWAIRYPSFTPDVAFVIRQMLERHVEGN--AIRGIVHWSGDE-PMTKYE 238 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGV 283 A + AE +++ PT A RP L +L R + + G+ Sbjct: 239 IAMRL----AEALNLDARLTPQHA---PTDATPRPHNCHLASERLEQLGIGRRTAFDTGI 291 Query: 284 RNILV 288 R +L Sbjct: 292 REVLA 296 >gi|160937122|ref|ZP_02084485.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC BAA-613] gi|158440023|gb|EDP17771.1| hypothetical protein CLOBOL_02013 [Clostridium bolteae ATCC BAA-613] Length = 294 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 115/299 (38%), Gaps = 28/299 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 + L+ G G + + E + V ++D+ ++F + PD +++ AA Sbjct: 4 RLLITGAGGFLGSRICEYYSNRDGYEAVGVTHRELDIEDFVAVSAFIKAIRPDYVLHCAA 63 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD-GLSRTPIDEFSPT 118 + E P ++ +N G +AKA + G I+ S+D +++ S P E S Sbjct: 64 ISNTGTCERNPVLSEKVNVRGTINLAKACRNAGSRMIFTSSDQIYNTSHSMEPNREGSEG 123 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF------LLSMLRLAKERREI 172 P N+YG+ K EE + +Y + V LR W+Y L + K+RRE+ Sbjct: 124 KPGNVYGRDKKRAEEAMLTYLPDAVALRLTWMYDAPSRGRAAGQGLLQKLADALKDRREV 183 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + T ++ R + + G+++ ++ + D A E Sbjct: 184 EFPVHDYRGITYVWEVVRHLEEAMGL--------PGGVYNFGSENRYNT-FDTARLFLRE 234 Query: 233 SA--ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 A + GG + F P +D K+ + + IR EG+R + Sbjct: 235 LAGSDSGGILKRNDERFASC-------PRNLTMDTDKIKS-YGIRFFNTSEGIRKCCME 285 >gi|332656502|gb|AEE81902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 331 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 124/322 (38%), Gaps = 42/322 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVGRP-----------------DIDLL 37 K L++G G + Q L + ++ +DL Sbjct: 6 KVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAFPVDLK 65 Query: 38 KPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPC 95 S F PDV++N AA + E +P+ A SIN + + ++ Sbjct: 66 SGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLL 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I++STD V+ G+ + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 126 IHLSTDQVYQGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQT 184 Query: 156 SNFLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + L L + K+ + D+F P + ++ + + D +R Sbjct: 185 VSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSD-DKQMRL 243 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK----QYPTKAHRPAYSCLDC 265 + + +S A+ + + RG S + + Q PA +D Sbjct: 244 VLN-AGGPERLSRVQMAQMV---AEVRGYDLSLIKHVSASSLFCQIDRGVVSPADISMDI 299 Query: 266 SKLANTHNIRISTWKEGVRNIL 287 +KL +T + +++KEGVR L Sbjct: 300 TKLIHTLELSPTSFKEGVRLTL 321 >gi|289678441|ref|ZP_06499331.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 134 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 5/134 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDID-----LLKPKDFASFFLSFSPDVII 55 MK L++G NGQ+ L E+I + R D L A+ + +PDVI+ Sbjct: 1 MKILLLGKNGQVGWELQRALAPLGEVIALDRQGADGLCGDLADLVRLAATVRALAPDVIV 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AAYTAVDKAE EP++A IN E G +A A ++G I+ STDYVFDG E Sbjct: 61 NAAAYTAVDKAESEPDLAMLINGEAPGVLASEAAALGAWLIHYSTDYVFDGSGDQQWRED 120 Query: 116 SPTNPLNIYGKSKL 129 + T PL++YG+SKL Sbjct: 121 AATGPLSVYGRSKL 134 >gi|296413040|ref|XP_002836226.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630035|emb|CAZ80417.1| unnamed protein product [Tuber melanosporum] Length = 309 Score = 171 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 111/287 (38%), Gaps = 23/287 (8%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP--------DIDLLKPKDFASFFLSFSPDV 53 +V G GQ+ + + I G +DL + A P V Sbjct: 6 VVVTGGTGQLGRQCVKAFEGAKWKTIGTGYSRANPPAILKVDLGNAGEVAGLLEEVKPKV 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 +++ AA DK + +PE +N + + ++A+ + I IYISTDYVFDG P Sbjct: 66 VVHCAAERFPDKCDADPEGVKRLNVQASNSLAQECANRDIILIYISTDYVFDGKPGAAPY 125 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA------ 166 + + TNP N YG++KLAGE+ V S V+ R +Y + ++ L Sbjct: 126 EADAATNPANFYGETKLAGEQAVLSAWRKSVVFRIPVLYGEVEESKESAVNVLLDMVLNK 185 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD-TSLRGIFHMTADGGPVSWADF 225 + + + PT+ +AR + +A D SL + +++ + Sbjct: 186 AGKERVEMDHWSIRYPTNTSDVARVLKDVAERYTSADDIDSLPKVLQFSSEDRMTKY--- 242 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLANT 271 I + +E G K +P+ A RP L L Sbjct: 243 --EICQKLSEIAGLSINHIVGNDKNHPSVAVMRPYDCHLSTKALKEL 287 >gi|71901358|ref|ZP_00683452.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] gi|71728857|gb|EAO30994.1| dTDP-4-dehydrorhamnose reductase [Xylella fastidiosa Ann-1] Length = 158 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 81/159 (50%), Gaps = 11/159 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRP----------DIDLLKPKDFASFFLSFS 50 M LV G GQI Q L V + V R D +P+ + Sbjct: 1 MTVLVFGAGGQIGQELLRSLSGRV-VCAVTRSGRLPNGRGCVQADFGQPETLRPLLDAQR 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P ++N AAYTAVD+AE EP++ F INA+ G IA G+P ++ STDYVFDG + Sbjct: 60 PVQVVNAAAYTAVDRAESEPDVVFRINAQAPGVIAHWCAEHGVPLVHYSTDYVFDGQGTS 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW 149 P P PLNIYG SKLAGE V + +ILRT+W Sbjct: 120 PYGVDDPVAPLNIYGASKLAGECAVRAAGGCSLILRTSW 158 >gi|283852032|ref|ZP_06369307.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] gi|283572582|gb|EFC20567.1| dTDP-4-dehydrorhamnose reductase [Desulfovibrio sp. FW1012B] Length = 321 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 28/300 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG-----------RPDIDLLKPKDFASFFLSFS 50 + LV G +G + +++ +D E++ +D+ + A+ F Sbjct: 6 RLLVTGASGLLGGNVALALCRDWEVVGTYAAHPFSLAGTVSRRLDIRSDGEVAALFADIR 65 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P+V ++ AA T VD E P+ AF++NA G +A+AA + G +++STD V+ Sbjct: 66 PEVTVHCAAETRVDACEARPDEAFAVNARAPGRLARAARAAGSLFVHVSTDAVY-APGGA 124 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT---AWVYSIFGSNFLLSMLRLAK 167 P E +PT P+N Y SKLAGEE VA +I+RT W S ++ RL Sbjct: 125 PHAESAPTGPVNAYAASKLAGEEAVAEAGGECLIVRTNLFGWSGRAKRSLAEWALARLEA 184 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 ++ D +P A +ARAI + RG+++ VS F Sbjct: 185 GGEPLTGFTDAVFSPLLASDLARAIEALVR-------AGARGVYN-AGAADAVSKYAFLR 236 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR-ISTWKEGVRNI 286 E G P V + Q A RP + LD S+ A E VR + Sbjct: 237 ---LLCREFGYPEDLVRPGRSGQ-TLAARRPGDTSLDSSRAAALIGTSFFPPVAEAVRRL 292 >gi|182418039|ref|ZP_02949344.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium butyricum 5521] gi|237665702|ref|ZP_04525690.1| dTDP-4-dehydrorhamnose reductase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378094|gb|EDT75630.1| putative dTDP-4-dehydrorhamnose reductase [Clostridium butyricum 5521] gi|237658649|gb|EEP56201.1| dTDP-4-dehydrorhamnose reductase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 288 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 25/297 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA--A 59 K L+ G G A + +II + + ++++ K+ S +P I++ A A Sbjct: 3 KILITGGKGFFASRFNEYYKDKYDIISLSKEELNITHEKEVISKIKEVNPKFIVHTAAIA 62 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPT 118 YT V E PE +F IN G+ IAKA+D + I+IS++ V++G P +E + Sbjct: 63 YTQV--CEKNPEYSFEINVTGSKNIAKASDLVKAKLIHISSEQVYNGNLEEGPYNEDTIP 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF------LLSMLRLAKERREI 172 P +YGK KL E++V+ T N ILR W++ + ++ R + + Sbjct: 121 IPDTVYGKQKLLAEQEVSKITENVWILRFNWLFGFPEKCGKVNANIIWNVTRALLKGENM 180 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 V +++ T + +I GI++ T +S + A+ I E Sbjct: 181 RVPSNEYRGMTYVYDLLENFYKIFEI--------PFGIYN-TGSENNLSTYNVAKIILEE 231 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 K+ I + R + KL N + + T +E +R + + Sbjct: 232 M----NLSHKINEILIRDEERFKERKRDLRISNLKLENNGIVFLET-EEAIRKCVKD 283 >gi|160945148|ref|ZP_02092374.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii M21/2] gi|158442879|gb|EDP19884.1| hypothetical protein FAEPRAM212_02667 [Faecalibacterium prausnitzii M21/2] Length = 278 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 30/295 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G G + + E+ + + + L PD I++ AA + Sbjct: 3 KILVTGAGGFVGSRVVQQWSGRYELCTFPKGFLATAREDAVRQAVLQQRPDGILHTAAIS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 D PE A+ N E +A+AA IG + S+D V+ G+ + P+ E P P Sbjct: 63 DTGYCADHPEQAYRANVELPVWLARAAAEIGAKLVAFSSDQVYAGVEQSGPLPETIPLKP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 N+YG+ KL E++V + V+LR W+Y + N L++LR A+ + Sbjct: 123 ANVYGQDKLEMEQRVQALCPGAVLLRATWMYDLPGYRLPIRGNLPLNLLRAAQRGESVRF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 F T Q A L+E + T G+++ ++ AE + + Sbjct: 183 SVRDFRGITYVRQ--------AVALLEAALTLPGGVYNFGSEN--------AENMVLTAR 226 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + + I + +DCSKL H I T + G+ L + Sbjct: 227 QFAETLGIMVDIQEADWAR------NLAMDCSKL-QAHGIVFDTTQAGLTRCLRD 274 >gi|123410516|ref|XP_001303722.1| dTDP-4-dehydrorhamnose reductase [Trichomonas vaginalis G3] gi|121885122|gb|EAX90792.1| dTDP-4-dehydrorhamnose reductase, putative [Trichomonas vaginalis G3] Length = 285 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 24/280 (8%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G +G + + L S ++ ++ ++DL + S +P +II+ AA Sbjct: 1 MKTILVTGGSGFLGRRLVSHLSKNYTVVAPTHGELDLTDREKIISEVTKINPQIIIHTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEFSPT 118 + E PE++ SIN G +A+AA I I+ S+D +++G + P+ E Sbjct: 61 ISNTGLCEQNPELSESINLNGTKYLAEAASKINSKLIFCSSDQIYNGNAEKGPLSEDIDV 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLRLAKERREISV 174 +P+N+YGK KL E K+ V LR W+Y S + L ++ L + + + Sbjct: 121 HPVNVYGKHKLEAERKLQEILPTSVSLRLTWMYDHPSSKIPQHKNLPIMLLEAKEKNVPF 180 Query: 175 VC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 V +++ T ++ I E + G+++ A S+ + E Sbjct: 181 VTTVNEYRAITFVGEVVENI--------EKTFELPGGVYNYGASNTSNSY-----ETYKE 227 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 A+ + T ++ +A ++ K+ Sbjct: 228 IAKIMDVPENLVENDTNRFKAQAR---NISMNIQKIEKHG 264 >gi|168699195|ref|ZP_02731472.1| hypothetical protein GobsU_06715 [Gemmata obscuriglobus UQM 2246] Length = 724 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 18/286 (6%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G G + + C + + + R + D+ P + P ++N A Y Sbjct: 445 ILLTGGAGPLGAAFLRACACRGLAVAAPARDECDITDPASVGAALTRLRPWAVVNAAGYA 504 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 VD AE E E NA+G +A A + G+P + STD VFDG S P E + PL Sbjct: 505 KVDAAEAEAERCRRHNADGPAVLAAACATAGLPLVTFSTDLVFDGRSTRPYFEGAAPEPL 564 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKERREISVVCDQFG 180 ++YG +K E +V + +++RT ++ + NF+ LR + D Sbjct: 565 SVYGAAKAEAERRVLTSHAGALVIRTGPLFGPWDGRNFVAQALRALRTGVPFPAADDLVT 624 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 TP + + + + G++H+ A +SWA + G Sbjct: 625 TPAYLPDLVSEALDLLID-------GACGLWHL-APPDSMSWA---ALARAAARRAGLAC 673 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 S V + A RP YS L + + + + + Sbjct: 674 SGVIGRPAHSFCWPAPRPPYSALGTER-----GVLLPPLDDSLARF 714 >gi|255955515|ref|XP_002568510.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590221|emb|CAP96395.1| Pc21g14980 [Penicillium chrysogenum Wisconsin 54-1255] Length = 314 Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 113/321 (35%), Gaps = 50/321 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRP------DIDLLKPKDFASFFLSFSPDV 53 LV G +G + +++ + ++ RP DL K +D F P + Sbjct: 5 VLVTGASGFLGRAVFNTFQHSGVLVVGQGFSRPAPPTILKADLEKEEDIRMLFDEIKPQI 64 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +I+ AA + D E +P+ A +N E +AK + G IYISTDYVF G P Sbjct: 65 VIHCAANKSPDLCEKDPDQARRVNVEATRTLAKECQARGAFLIYISTDYVFPGTEGEAPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF-------LLSM 162 + S T P N+YG+ K GE V T + ++LR +Y N + ++ Sbjct: 125 ESDSETKPPNLYGQLKRDGEVAVLEATKDSGMGIVLRVPVLYGSAKENSESAVNTLVDAV 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPV 220 + E + + PT+ +AR I + + I +++ Sbjct: 185 KKATDENAGVKMDDWAMRYPTNTEDVARVCRDIVIKYLREKEKRKDFPRILQFSSEDRMT 244 Query: 221 SWADFAEYIFW---------ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 + + + + ++G RP + L L Sbjct: 245 K-YEICQKLAQVLGVAIPGMIANKQGNDP-----------NAGVVRPYDTHLSTKALTE- 291 Query: 272 HNIRIST------WKEGVRNI 286 I + T W+ + Sbjct: 292 LGIDVKTVDFIAWWRRELGAY 312 >gi|225454083|ref|XP_002266457.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed protein product [Vitis vinifera] Length = 318 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 125/316 (39%), Gaps = 38/316 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-------------------DVEIIRVGRP-DIDLLKPKD 41 + LV+G G + Q L + V I R ++L + Sbjct: 5 RVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTPPQPLVHAIPHSRAFHVNLQSGEG 64 Query: 42 FASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---DSIGIPCIY 97 F + SF P V++N AA + E +P A SIN ++ K + I+ Sbjct: 65 FEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINV--PSSLVKWLLSFEESNTLLIH 122 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF--- 154 +STD V++G+ + E T P+N+YGKSK+A E+ +++ +NY ILR++ + Sbjct: 123 LSTDQVYEGVK-SFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGPQAIS 181 Query: 155 ---GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 S + + + ++ D+F P + I+ + I ++ + Sbjct: 182 PVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWI--AEGKQMKLI 239 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 VS A AE + + RG S + + P +D ++L T Sbjct: 240 LNAGGPDRVSRAQIAETV---ADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQT 296 Query: 272 HNIRISTWKEGVRNIL 287 +I ++ + GV+ L Sbjct: 297 LHISPTSLRVGVQLTL 312 >gi|295105609|emb|CBL03153.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii SL3/3] Length = 278 Score = 169 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 114/295 (38%), Gaps = 30/295 (10%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K LV G G + + E+ + + L PDVI++ AA + Sbjct: 3 KILVTGAGGFVGSRVMQQWAGHYELCTFPKGFLATAGEDAVRQAVLQQRPDVILHTAAIS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 PE A+ N E + +A+AA IG + S+D V+ G+ + P+ E P P Sbjct: 63 DTGYCAGHPEQAYRANVELSVWLARAAAEIGAKLVAFSSDQVYAGVEQSGPLPETIPLKP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 N+YG+ KL E++V + V+LR W+Y + N L++LR A+ + Sbjct: 123 ANVYGQGKLEMEQRVQALCPGAVLLRATWMYDLPGYRLPIRGNLPLNLLRAAQRGESVRF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 F T Q A L+E + T G+++ ++ AE + + Sbjct: 183 SVWDFRGITYVRQ--------AVALLEAALTLPGGVYNFGSEN--------AENMVLTAR 226 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + I + +DCSKL H I T + G+ L + Sbjct: 227 QFAETLGITVDIQEADWAR------NLAMDCSKL-QAHGIVFDTTQAGLTRCLRD 274 >gi|238023766|ref|YP_002907998.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] gi|237878431|gb|ACR30763.1| DTDP-4-dehydrorhamnose reductase [Burkholderia glumae BGR1] Length = 314 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 41/320 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD---------------------IDLL 37 M +IG +G + +++++ ++ ++ R +D+L Sbjct: 1 MNLALIGASGLLGRAVAAALAPRREWRLVATVRDPHGAPARAAARLAGLGPDALTPLDVL 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 + FF PD +I AA D E EP A +IN E A+A AD++G + Sbjct: 61 DARALDRFFAEHRPDAVIVCAAERRPDVCEHEPAAARAINVEALAALAARADALGAWTLA 120 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +STDYVFDG + P E P PLN YG+SK GE + + +LR +Y Sbjct: 121 MSTDYVFDGRA-APYRETDPPAPLNAYGRSKADGEAALLDASARACVLRLPLLYGPVFGW 179 Query: 158 --------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + + PT +A I Q+ ++ G Sbjct: 180 GDSAVTSLVPPVVASAQPGAAAADMDAWAIRYPTWTPDVAYVITQLVARHAAGE--AVTG 237 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 H + D P++ + A I G ++ I + RP LD ++L Sbjct: 238 RCHWSGDE-PMTKHEIATRI----GRALGLRPRLNAI--AEPRDATPRPYDCHLDSTRLE 290 Query: 270 NTHNIRISTWKEGVRNILVN 289 R + + +R +L + Sbjct: 291 ALGIGRRTRFDAAIREVLRD 310 >gi|218674076|ref|ZP_03523745.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli GR56] Length = 145 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 77/145 (53%), Positives = 99/145 (68%), Gaps = 1/145 (0%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M+ V G GQ+ QSL + VEII VGRP++DL P A+ F + PDVI++ AA Sbjct: 1 MRIAVTGKQGQVVQSLLRRGAETGVEIIAVGRPEMDLSDPASIAAAFSALRPDVIVSAAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 YTAVDKAE E E+AFS+NA GAGA+A+AA IG+P I+ISTDYVF G + E T Sbjct: 61 YTAVDKAESEAELAFSVNAVGAGAVAEAAARIGVPVIHISTDYVFSGDKASAYCEEDATG 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVI 144 P+++YG+SKLAGE VA+ N+VI Sbjct: 121 PISVYGRSKLAGETAVAAANPNHVI 145 >gi|224013959|ref|XP_002296643.1| Hypothetical protein THAPSDRAFT_8901 [Thalassiosira pseudonana CCMP1335] gi|220968693|gb|EED87038.1| Hypothetical protein THAPSDRAFT_8901 [Thalassiosira pseudonana CCMP1335] Length = 378 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 70/337 (20%), Positives = 119/337 (35%), Gaps = 71/337 (21%) Query: 3 CLVIGNNGQIAQSLSSMCVQD---VEIIRVG--------------------RPD-----I 34 L+ G +G + +SL +++ +I G + + Sbjct: 12 ILITGASGMLGRSLHRFLLRNADEYNVIGTGLSRLSVHHYHEHYPSPSSTPHEEVKLYKL 71 Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-- 92 +LL K +SF + PD+I++ AA D E E +F +N + +A+ G Sbjct: 72 NLLDHKATSSFLQTHRPDIIVHCAAERYPDAFEQNVEASFQLNVDATKFLAQECLRHGKA 131 Query: 93 --------IPCIYISTDYVFDGL----SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN 140 IYIST YVFDG P S NPLN YG+SK GE V N Sbjct: 132 TEKDRSTLPKLIYISTSYVFDGGVSSLVYPPYKPDSKVNPLNNYGRSKWEGECAVRDVLN 191 Query: 141 -------NYVILRTAWVYSIFG------SNFLLSMLRLAKERREISVVCD-QFGTPTSAL 186 +I+R +Y + + L+ + + + D PTS Sbjct: 192 VAEEGDGQGIIVRVPLLYGEDCIDLKESPALEMMKVHLSPTPQGVQKIDDWALRFPTSVE 251 Query: 187 QIARAIIQIAHNLIENSDTS-----LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 ++R + + L+ ++ T+ G +H+ + G + +F ++ Sbjct: 252 DVSRVLKLMIDQLLTSTATNDASQINAGTYHVASPHGVTKYQ-----LFQLQSKLMKIPV 306 Query: 242 KVYRIFT----KQYPT-KAHRPAYSCLDCSKLANTHN 273 + P A RP + LDC + Sbjct: 307 SIMDSKAVGENSGPPENSAPRPQCTQLDCEDTSKALG 343 >gi|94500438|ref|ZP_01306970.1| dTDP-4-dehydrorhamnose reductase [Oceanobacter sp. RED65] gi|94427473|gb|EAT12451.1| dTDP-4-dehydrorhamnose reductase [Oceanobacter sp. RED65] Length = 283 Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 117/293 (39%), Gaps = 26/293 (8%) Query: 3 CLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 +++G + + ++L+ + + V + + D DL S SP +IN Sbjct: 7 IVILGADNPVGRALTELAQEKKVSLHAIYSTDWDLSDIDTVQSRLKELSPQFLINCI--- 63 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL 121 + A A +A+ ++ IP + +S++ VF G E P Sbjct: 64 --------RPLGSGTTAHIASVLAQVCCTLNIPLLQLSSNAVFAGQESHVFKEDDEPYPG 115 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 G+ LA E + S ++ILR W++S G + + +L LA+ + + + Sbjct: 116 TAIGQQVLAVENAIQSSCPRHMILRVGWLFSSQGHDDVSRLLELAQTESVLHLSDSKVLC 175 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPY 240 PTSA IA ++ + + + L GI+H + + FAE + E+ + P Sbjct: 176 PTSACDIAAVLMAMVY---QARYAELWGIYHYCS-AEKTNLYKFAEVVVAEARQYEDLPL 231 Query: 241 SKVYRIFTKQYPTKAHRPAYS----CLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + + +S L+ K+ +T I+ W++ + IL Sbjct: 232 QEIQVDASHEMNA-----QFSESSPRLNTKKILHTFGIKPKPWRQALSRILKK 279 >gi|289619217|emb|CBI54485.1| unnamed protein product [Sordaria macrospora] Length = 337 Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats. Identities = 75/330 (22%), Positives = 120/330 (36%), Gaps = 53/330 (16%) Query: 4 LVIGNNGQIAQSLSSMCVQ---------------DVEIIRVGRPD------IDLLKPKDF 42 LV G G + + + +V+ R D +DL K ++ Sbjct: 12 LVTGATGLLGRQVVKAFQGLSVPTELSSNAGWTWEVKGTGFSRADGVNVLKVDLEKAEEV 71 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 +P V+++ AA DK + +PE +N E +AKA S GI IYISTDY Sbjct: 72 ERILEDVNPQVLVHCAANRFPDKVDADPEGTRLLNVEATRTLAKACASRGILLIYISTDY 131 Query: 103 VFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFG 155 VF G P + + T P N+YG +KL GE+ V + V++R +Y Sbjct: 132 VFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVMEEFSKAGKEGLGVVMRVPVLYGKTE 191 Query: 156 S--------NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 N LL + A+E +++ + PT+ + R +A + S Sbjct: 192 EGRNEESAVNVLLDAVFKAQEGKKVKMDHWALRFPTNTEDVGRVARDVAVKYLSTSGAER 251 Query: 208 R---GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK--QYPTKAHRPAYSC 262 I M+++ + + AE G T+ RP Sbjct: 252 SSLPRILQMSSEEQYTK-YEMCQ----LFAEILGVPLDNMEANTEGNDPNASVQRPYDCH 306 Query: 263 LDCSKLANTHNIRIST------WKEGVRNI 286 L L + I +ST W+ +R Sbjct: 307 LSTKALKD-LGIDVSTQDFAGWWRRELRAF 335 >gi|15897732|ref|NP_342337.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus P2] gi|6015645|emb|CAB57472.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus solfataricus P2] gi|13814013|gb|AAK41127.1| dTDP-4-dehydrorhamnose reductase (rfbD-1) [Sulfolobus solfataricus P2] Length = 226 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 73/233 (31%), Positives = 107/233 (45%), Gaps = 19/233 (8%) Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F + PDVIIN AA T VDK E E E A+ INAE + +A+ + I++STDY Sbjct: 2 EDFIIKTRPDVIINTAAMTDVDKCEVEREKAYKINAEAVKHMVRASRVVEAYFIHVSTDY 61 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VFDG E NP+N YG +KL GE SY ++ VI RT+ V+ F + + Sbjct: 62 VFDGTKGN-YKEDDLPNPINYYGLTKLLGETFALSYDDSLVI-RTSGVF--RHKGFPVYV 117 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + KE + + + +P SA ++A AI ++ G+ ++ G +S Sbjct: 118 YKTLKEGKTVFAYK-GYYSPISARKLASAIEELLALRKT-------GLLNVA--GERISR 167 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 + A I E G +V + A RP S LD SK ++ Sbjct: 168 YELALKI-KEKFNLPGEVKEVDEVK----GWTARRPFDSSLDYSKAKKILSVD 215 >gi|293401867|ref|ZP_06646008.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304819|gb|EFE46067.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 289 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 113/295 (38%), Gaps = 20/295 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + ++ G NG IA + ++++ + R D D P ++F D + + AA Sbjct: 3 RIIITGGNGFIASLVKESLKNTMDVVAMTRKDADFADPDAVRAWFEKQEFDYVFHTAAMA 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNP 120 E+ PE+ + +N E IA ++IST+ F+ + P E Sbjct: 63 QTADCENYPELTYRVNVESTKVIADICKERHARLLFISTEQCFNAKTCAGPFKEEDSLCS 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLLSMLRLAKERREISV 174 + YG+ K+ E + S+ +Y+ILR +W+ + N + +++ ++ Sbjct: 123 ITKYGQHKVECENYITSHLEDYLILRFSWMLGMNRPGIKASPNIIRNVMHALFYQQPTKF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 ++ T A ++A I GI+H++ + + A+ + + Sbjct: 183 TVNEIRGMTYAQKLADQFTNIMELA--------SGIYHISDTNTHNT-YESAKIV---AR 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + R + R LD K+ I T++E V L + Sbjct: 231 KLGFDEETIDRYILPDHERYKERFRDYRLDHQKIEEA-GIHFGTFEENVDACLKD 284 >gi|218283382|ref|ZP_03489409.1| hypothetical protein EUBIFOR_01998 [Eubacterium biforme DSM 3989] gi|218215904|gb|EEC89442.1| hypothetical protein EUBIFOR_01998 [Eubacterium biforme DSM 3989] Length = 290 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 117/298 (39%), Gaps = 23/298 (7%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK LV G NG IA + + + I + R D DL P+D F S D+ + AA Sbjct: 1 MKTILVTGANGYIASLVRAYQKDNFNWICMTRKDADLTNPEDVKKFVASQDFDICFHTAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPT 118 + P++ IN E AI G I+ ST+ F+G P E P Sbjct: 61 NATTAFCNEHPDLVHKINVESTQAIIDCCKEKGAKLIFCSTEQAFNGKENCGPFKEDEPL 120 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-------SNFLLSMLRLAKERRE 171 + + +YG++K+ EE + ++ +ILR W+ + S M L Sbjct: 121 SAVTVYGQNKIECEELIQKQLDDAIILRFTWMMGLSYPGIKASPSIIKNVMNALINHTPT 180 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 + V ++ G T A +A +I GI+H+ + + + A+Y+ Sbjct: 181 LFTVNEKRGM-TYAKHLATQFDKITEL--------EPGIYHVASKNTMTT-YESAKYV-- 228 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G + I R LD KL + I +T++E V IL++ Sbjct: 229 -AKALGASDELIEEIILPNNERYQDRFRDYRLDSEKLES-LGIHFATFEEDVNEILMD 284 >gi|254255188|ref|ZP_04948504.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] gi|124900925|gb|EAY71675.1| dTDP-4-dehydrorhamnose reductase [Burkholderia dolosa AUO158] Length = 321 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 24/286 (8%) Query: 13 AQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEI 72 A + + + E + +D+L F + P +I AA D E +P Sbjct: 46 ASARARLLALPPENVAT----LDVLDEPALERLFDARKPAAVIICAAERRPDVCERDPAA 101 Query: 73 AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGE 132 A +IN + IA A + ISTDYVFDG S P E + NPLN+YG++KL GE Sbjct: 102 ARAINVDAPARIAALAARYDAWTLGISTDYVFDG-SAAPYREDAAPNPLNVYGRTKLEGE 160 Query: 133 EKVASYTNNYVILRTAWVYSIFGSNFLLSMLRL-----AKER---REISVVCDQFGTPTS 184 + + + +LR +Y + S+ L A R R + + PT Sbjct: 161 AALLAASPRSCVLRVPLLYGPIANWSESSVTSLVPAIVASARPGARAVGMDAWAIRYPTF 220 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 +A I + + S + G+ H +AD P++ D A I A G + + Sbjct: 221 TPDVAAVIRDLTLRHLAGS--PVTGLCHWSADE-PMTKYDIARRI----AAALGIEAALE 273 Query: 245 RIFTKQYPTKA-HRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 I PT A RP LD S++ + + +R +L + Sbjct: 274 PI---DKPTDATPRPYDCHLDASRVRALGIAYATPFDTALRAVLRD 316 >gi|85103557|ref|XP_961543.1| hypothetical protein NCU01177 [Neurospora crassa OR74A] gi|18376291|emb|CAD21404.1| related to methionine adenosyltransferase regulatory beta subunit [Neurospora crassa] gi|28923090|gb|EAA32307.1| hypothetical protein NCU01177 [Neurospora crassa OR74A] Length = 338 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 119/329 (36%), Gaps = 51/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQ---------------DVEIIRVGRPD------IDLLKPKDF 42 LV G G + + + +V+ R D +DL K ++ Sbjct: 13 LVTGATGLLGRQVVRAFQGLSVPTEVSSKAGWTWEVKGTGFSRADGVNVLKVDLEKAEEV 72 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 SP V+++ AA DK + +PE +N E +A+A S GI IYISTDY Sbjct: 73 ERVLGDVSPQVLVHCAANRFPDKVDADPEGTRLLNVEATRTLARACASRGILLIYISTDY 132 Query: 103 VFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYSIFG 155 VF G P + + T P N+YG +KL GE+ V + V++R +Y Sbjct: 133 VFSGKPGEAPYEADAATGPTNLYGVTKLDGEKAVIEEFSKASKEGLGVVMRVPVLYGKTE 192 Query: 156 S--------NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI---ENSD 204 N LL + A+E +++ + P + + R +A + E Sbjct: 193 EGRNEESAVNVLLDAVLKAQEGKKVKMDHWALRFPANTEDVGRVCRDVAVKYLSTSEAER 252 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIF-TKQYPTKAHRPAYSCL 263 TSL I + + + + + G P + RP L Sbjct: 253 TSLPRILQFSGEEQYTK-YEMCQ---LFAEILGVPVDNIEANTEGNDPNASVQRPYDCHL 308 Query: 264 DCSKLANTHNIRIST------WKEGVRNI 286 L + I +ST W+ +R Sbjct: 309 STKALKD-LGIDVSTQDFAAWWRRELRAF 336 >gi|134057127|emb|CAK44415.1| unnamed protein product [Aspergillus niger] Length = 324 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 103/299 (34%), Gaps = 28/299 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV---------EIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 LV G G + + + + I DL K +D + P + Sbjct: 15 VLVTGATGLLGRQVFNTFKHSGCLVVGQGYSRAIPPTIQKADLEKEEDIKNLLNEAKPQI 74 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +I+ AA + D + P+ A +N + +A+ G +YISTDYVF G P Sbjct: 75 VIHCAANRSPDLCDQNPDQARRVNVDATRTLAEETARRGALLVYISTDYVFPGKEGEAPY 134 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNN---YVILRTAWVYSIFG-------SNFLLSM 162 + + TNP N+YG+ K GE V T + ++LR +Y + + ++ Sbjct: 135 EADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVLYGTAKENSESAVNTLVDAV 194 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPV 220 + E + + PT+ +AR I ++ L I +++ Sbjct: 195 YKAQDESAGVKMDDWALRYPTNTEDVARVCRDIVIKYVKERQRIQELPKILQFSSEDRMT 254 Query: 221 SWADFAEYIFWESAERGGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + E + G V RP + L L I + T Sbjct: 255 K-YEICE---KLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHLSTKALKE-LGIDLRT 308 >gi|325568862|ref|ZP_08145155.1| hypothetical protein HMPREF9087_1444 [Enterococcus casseliflavus ATCC 12755] gi|325157900|gb|EGC70056.1| hypothetical protein HMPREF9087_1444 [Enterococcus casseliflavus ATCC 12755] Length = 287 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 115/293 (39%), Gaps = 19/293 (6%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 + G NG +A + + + + R D+D FF + D++I+ AA+T Sbjct: 4 IAITGANGYLASLIQKQNHETFTFLPITRKDVDYEDLAAVNKFFEKQTFDILIHTAAHTQ 63 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLN 122 E P +N + A +AK I+++T+ VF+ + P E + Sbjct: 64 TADCEAHPFETKKVNTDSAIELAKICKKKNARFIFLNTEQVFNDNAVGPYSESDSPKSAS 123 Query: 123 IYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF------LLSMLRLAKERREISVVC 176 IYG+ KLA E + ++ +Y+ILR +W+ + L ++ ++ S Sbjct: 124 IYGQQKLAVETFLRTFDCDYLILRPSWMMGLSYPEVSASPNILKQVINAFLYQQPTSFPV 183 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 + T A + A + +I G +H ++ +S FA +I E Sbjct: 184 HEVRGLTYAKKFADQLEKILQL--------PTGTYHFSSTNS-LSTYAFATFIAKELG-F 233 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + Y + ++ +A R L K+ + + +S+ + V L + Sbjct: 234 DEKLCRKYVLPDEERYAQAPR--DLRLATEKIKSH-GLSLSSSQNDVIECLKD 283 >gi|317027132|ref|XP_001400195.2| NAD dependent epimerase/dehydratase family protein [Aspergillus niger CBS 513.88] Length = 315 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 60/299 (20%), Positives = 103/299 (34%), Gaps = 28/299 (9%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV---------EIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 LV G G + + + + I DL K +D + P + Sbjct: 15 VLVTGATGLLGRQVFNTFKHSGCLVVGQGYSRAIPPTIQKADLEKEEDIKNLLNEAKPQI 74 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +I+ AA + D + P+ A +N + +A+ G +YISTDYVF G P Sbjct: 75 VIHCAANRSPDLCDQNPDQARRVNVDATRTLAEETARRGALLVYISTDYVFPGKEGEAPY 134 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------SNFLLSM 162 + + TNP N+YG+ K GE V T + ++LR +Y + + ++ Sbjct: 135 EADAQTNPPNLYGQFKRDGEVAVLEATKDTGLGIVLRVPVLYGTAKENSESAVNTLVDAV 194 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPV 220 + E + + PT+ +AR I ++ L I +++ Sbjct: 195 YKAQDESAGVKMDDWALRYPTNTEDVARVCRDIVIKYVKERQRIQELPKILQFSSEDRMT 254 Query: 221 SWADFAEYIFWESAERGGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + E + G V RP + L L I + T Sbjct: 255 K-YEICE---KLADVLGLSLVGMVRNKQGNDPNASVQRPYDTHLSTKALKE-LGIDLRT 308 >gi|168003982|ref|XP_001754691.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694312|gb|EDQ80661.1| predicted protein [Physcomitrella patens subsp. patens] Length = 321 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 46/320 (14%) Query: 3 CLVIGNNGQIAQSL-----------------------SSMCVQDVEIIRVGRPDIDLLKP 39 L++G +G + L + + + ++ +DL Sbjct: 10 ILLVGGSGYLGLHLLEDLASPTCDCTLAYTYNSHPAPAELVDKLPNVLAFH---LDLRSG 66 Query: 40 KDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAE--GAGAIAKAADSIGIPCI 96 + S PDV+IN AA + E EPE A +IN + + I Sbjct: 67 EGLQEISKSLGTPDVLINCAAISVPRACEQEPEAAKAINVPTVLVQWLNDLGAAQPPFLI 126 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS 156 ++STD V+ G + +E T P+N YG++K+ E+ + S ++Y ILR++ +Y Sbjct: 127 HLSTDQVYKGDK-SFYEEKDETKPVNTYGETKVMAEKYIQSNYDHYAILRSSIIYGPQPF 185 Query: 157 NFLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 L L L D++ P ++Q L+E +R + Sbjct: 186 IPLPKTLPLQWIDGVLSSGSGADFFEDEYRCPVYVKD----VVQAIKLLMEKHFCGMRPM 241 Query: 211 FHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFT-KQYPTKAHRPAYSCLDCSK 267 + + GGP +S A AE + + RG V R+ + P +D SK Sbjct: 242 YLLLNIGGPDRLSRAAMAETV---AQVRGYDTKLVRRVSSQTAVNRGVVSPPDISMDVSK 298 Query: 268 LANTHNIRISTWKEGVRNIL 287 + N++++ + GV L Sbjct: 299 IVAELNMKMTDFATGVAMTL 318 >gi|330799032|ref|XP_003287552.1| hypothetical protein DICPUDRAFT_78411 [Dictyostelium purpureum] gi|325082416|gb|EGC35898.1| hypothetical protein DICPUDRAFT_78411 [Dictyostelium purpureum] Length = 459 Score = 166 bits (421), Expect = 4e-39, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 29/274 (10%) Query: 15 SLSSMCVQDVEIIRVGRPD----IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEP 70 L S+ E D +D+ K+ LSF+P II+ AA D+ E + Sbjct: 169 ELKSLAWSRYEKYSTLYKDQMQKVDITNEKELEQVVLSFNPQYIIHCAAERRPDQCEKDK 228 Query: 71 EIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 E +N + + + IG YIS+DYVFDG P + TNPL+ YG++K Sbjct: 229 EHVRKLNVGTTEKLIELSVKIGACLFYISSDYVFDG-KNPPYSIDAKTNPLSFYGETKRD 287 Query: 131 GEEKVASYTN------NYVILRTAWVYSIFGSNFLLSMLRLAK-------ERREISVVCD 177 E + + Y+ILR +Y S ++ +A+ + + + Sbjct: 288 SEIAILNAHKLHGDSFKYIILRVPVLYGPVESLKESAVTVVAESVIQANLSKTPVQIDNW 347 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 Q PT +AR +Q+ + GI+H +A + A ++ Sbjct: 348 QLRYPTHVDDVARCSLQLIV-------SKQYGIYHFSAFEQKTK-YEMAIE-MGKTLGIQ 398 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 V I + A RP + LD + +T Sbjct: 399 NVEDIVKPI--NEPGNGAPRPHNAQLDITHTVDT 430 >gi|254292575|ref|YP_003058598.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] gi|254041106|gb|ACT57901.1| dTDP-4-dehydrorhamnose reductase [Hirschia baltica ATCC 49814] Length = 280 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 21/286 (7%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGR----PDIDLLKPKDFASFFLSFSPDVII 55 M+ LV+G G + + + + E I R + DL + PD +I Sbjct: 1 MRWLVLGATGLLGPCFVNDIQNRGHEAISAARSNADENFDLSDIDALTTVLEEIKPDGVI 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA VDK E P A+ IN A+A + P + +STD+ F RTP E Sbjct: 61 NCAANIYVDKCEANPADAYLINTRPLSALANWSRETNQPLLQVSTDHYFIEGGRTPQPET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 +P + +N Y ++K E + ++LRT V + ++ +++ Sbjct: 121 APVSLVNEYARTKYLAEHLALTA-PKALVLRTNIV--GAQKGHGRWVKESLLDKGAMTLF 177 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D + +P +AR + +A G++++++ S +F I+ + Sbjct: 178 MDFYSSPLHVKDMARISLDLAAK-------GANGVYNVSSRD-VSSKGEF---IYAVAKA 226 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 V + + R LD SK T + T ++ Sbjct: 227 LNVNPDWV--VEGSGHQLAVKRAMCLGLDVSKAEKTLGYHLPTLEQ 270 >gi|328951577|ref|YP_004368912.1| dTDP-4-dehydrorhamnose reductase [Marinithermus hydrothermalis DSM 14884] gi|328451901|gb|AEB12802.1| dTDP-4-dehydrorhamnose reductase [Marinithermus hydrothermalis DSM 14884] Length = 241 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 36/271 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ LV G+ G++ ++L + + E+I RP +DL +P+ + F + P+V+++ AAY Sbjct: 1 MRLLVTGSTGRMGRTLLPLLPTEWEVIAPRRPAVDLTRPETLDALFAAHQPEVVLHLAAY 60 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V +AE E E+ + +N EG A+A+ A +++STDYVFDG R E NP Sbjct: 61 TDVARAEREREVCWRVNVEGTRALARRA---PGWFVHLSTDYVFDG-ERGMYREEDLPNP 116 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 N Y SK GEE +I+RT++ + + DQF Sbjct: 117 KNFYALSKTVGEEAARQA-PRPLIVRTSFKTAPWPYP---------------RAFVDQFT 160 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPY 240 + IAR ++ + NL + H+ + S D A Sbjct: 161 SADYVDVIARELLVLLRNLERLPRAVE--VLHIATE--RKSVYDLARR----------RT 206 Query: 241 SKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 V + + + P LD ++ Sbjct: 207 PSVQPMQRAE--APVYIPPDVSLDTTRWQQL 235 >gi|83644554|ref|YP_432989.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] gi|83632597|gb|ABC28564.1| dTDP-4-dehydrorhamnose reductase-like protein [Hahella chejuensis KCTC 2396] Length = 305 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 62/292 (21%), Positives = 126/292 (43%), Gaps = 10/292 (3%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII-RVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M V G + + ++++ Q ++ V + S D +++ A Sbjct: 1 MIVCVTGIDSPLGKAIAQRLQQSGIVVEGVPYEQFLMTNDAIVRGMKSMPSADFVVHAAE 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + + KAE P++A+ +N A+A+ AD P +++S+ VFDG+ + P + Sbjct: 61 MSDLFKAEQHPDLAYQVNVSACAAVAEVADLWKAPIVHLSSHLVFDGVKKNPYISANKGR 120 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 PL++YG++KL E+ + + ++ILR W+ +L +ML + ++ D Sbjct: 121 PLSVYGRTKLQSEQWLQENYSKHLILRVGWLLEAGAQGWLQTMLSALSSGKRLNASTDMQ 180 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES-AERGG 238 TP + +AR + + L + + S+ G++H V+ + + I ++ + Sbjct: 181 LTPVAVDDVARVVDAVIKQL--SCNISVWGVYHYAG-AEAVTHYELLKAIVLQAFGQEEM 237 Query: 239 PYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + + + P A PA L C KL NT ++ W+ L + Sbjct: 238 LQALIEKKGADVLPGVAL-PANGALGCIKLRNTFGVKQLPWR----RYLPAL 284 >gi|115437410|ref|XP_001217803.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114188618|gb|EAU30318.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 1018 Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 113/313 (36%), Gaps = 36/313 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 LV G G + + + + ++ R + DL KP D + P + Sbjct: 709 VLVTGATGLLGRQVFNTFKSSGCLVVGQGYSRANPPTILKADLEKPDDIHALLDDVKPQI 768 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +++ AA + D + +P+ A +N + A+AK + IYISTDYVF G P Sbjct: 769 VVHCAANRSPDLCDKDPDQARRLNVDATRALAKETVARNAFLIYISTDYVFPGKEGEAPY 828 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNFLLSMLRL---- 165 + SPTNP N+YG+ K GE V T + ++LR +Y SN ++ L Sbjct: 829 EVDSPTNPPNLYGQLKRDGEIAVLEETKDTGLGIVLRVPVLYGPAKSNSESAVNTLVDAV 888 Query: 166 ---AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGIFHMTADGGPV 220 E +++ PT+ +AR I I+ L + +++ Sbjct: 889 QKSQDENARVTMDDWAQRYPTNTEDVARVCRDIIIKYIKERSRIKQLPKVLQFSSEDRMT 948 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-- 278 + E + G + RP + L L I + T Sbjct: 949 K-YEICEKLAEIMGVSLGGMIRNQ--QGNDPNASVQRPYDTHLSTKALQE-LGIDVRTVD 1004 Query: 279 ----WKEGVRNIL 287 W+ L Sbjct: 1005 FVTWWR----RYL 1013 >gi|225163945|ref|ZP_03726235.1| dTDP-4-dehydrorhamnose reductase [Opitutaceae bacterium TAV2] gi|224801438|gb|EEG19744.1| dTDP-4-dehydrorhamnose reductase [Opitutaceae bacterium TAV2] Length = 314 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 122/311 (39%), Gaps = 32/311 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP-----------------DIDLLKPKDF 42 M + G +G + + + + ++ V P +DL +P Sbjct: 1 MNIFLTGASGLVGSAFARAGKRRGHRVLAVPGPAHARAGFGPIEGAARHFTLDLAEPGAV 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + L PD I+N AA + E +P ++ +N E +A+ A + I++S++ Sbjct: 61 TTVALDLFPDAIVNCAAIAEPARCEADPVLSQRLNVELPLELARVAHHMSARFIHVSSEQ 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV-ASYTNNYVILRTAWVYSIFGSNFLLS 161 VFDG R P SP +P+N+YG+ KL E V + ++R + + Sbjct: 121 VFDGT-RPPYAIGSPPSPINLYGRQKLESERAVTHAAPEFAAVVRAPLLTGNSLTGTRSL 179 Query: 162 MLRLAKE---RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 +L + R + D+F P +A +A ++++ ++RG++H Sbjct: 180 HEKLFADWAAGRAPRLFADEFRQPCTAENLAEVLLELCER------PAMRGVYHWAG-AE 232 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRIS 277 +S D A I + + + I P A+RPA L LA + Sbjct: 233 VLSRHDIARRIRSHF-KLNDKSAPLIAIKRADDPAASANRPADLTLLTKPLAGNLKTVVE 291 Query: 278 TWKEGVRNILV 288 ++ + +++ Sbjct: 292 SFDAQLDQLII 302 >gi|119499101|ref|XP_001266308.1| NAD dependent epimerase/dehydratase family protein [Neosartorya fischeri NRRL 181] gi|119414472|gb|EAW24411.1| NAD dependent epimerase/dehydratase family protein [Neosartorya fischeri NRRL 181] Length = 314 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 113/314 (35%), Gaps = 36/314 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 L+ G G + + + + + R DL KP+D + P + Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRATPPTILRADLEKPEDIKNLLDEAKPQI 64 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +I+ AA + D + PE A +N + +A+ + +YISTDYVF G P Sbjct: 65 VIHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKALLVYISTDYVFSGKEGEAPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF-------LLSM 162 + + +P N YG+ K GE V T ++LR +Y +N + ++ Sbjct: 125 EVDAEPSPTNYYGQLKRDGEIAVLEATKETGLGIVLRVPVLYGTAQNNSESAVNTLIDAV 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPV 220 + E + + PT+ +AR + ++ L + H +++ Sbjct: 185 WKAQDENAGVKMDDWAQRYPTNTEDVARVCRDVVIKYLKERSRIHELPKVLHFSSEDRMT 244 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTK---QYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + I + AE G S V I K RP + L L + + Sbjct: 245 KY-----EICEKLAEVLGL-SLVGMIRNKQGNDPNASVQRPYDTHLSTKVLKDLGIDVQT 298 Query: 278 T-----WKEGVRNI 286 T W++ + Sbjct: 299 TDFVAWWRKHLGAY 312 >gi|313900581|ref|ZP_07834074.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp. HGF2] gi|312954643|gb|EFR36318.1| NAD dependent epimerase/dehydratase family protein [Clostridium sp. HGF2] Length = 286 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 116/292 (39%), Gaps = 20/292 (6%) Query: 5 VIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVD 64 + G NG IA + +EII + R ++DL + S+F + D + + A Sbjct: 3 ITGGNGFIASLVKEAMQSTMEIIPLTRKELDLGETAAVRSWFNTHDYDYVFHTGAMAQTA 62 Query: 65 KAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNI 123 E+ PE+ IN +G IAKA I+IST+ F+G P E +P + Sbjct: 63 DCENHPELTHRINVDGTKEIAKACKEKNARLIFISTEQCFNGKTEEGPFTEDTPLCSVTA 122 Query: 124 YGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLLSMLRLAKERREISVVCD 177 YG K E + S +Y+ILR +W+ + N + +++ + + Sbjct: 123 YGNHKAECEAFITSVLEDYIILRFSWMLGMSRPGIKASPNIIRNVMNAMFYQTPAKFTVN 182 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG 237 + T A ++A +I GI+H++ + + A+ + + + G Sbjct: 183 EIRGMTYAQKLADVFDKIIEL--------PSGIYHVSDTNTHNT-YESAKIV---AQKLG 230 Query: 238 GPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 ++ + A R LD KL H I T++E V L + Sbjct: 231 FTQEQIDACILPNHERYADRFRDYRLDTQKLK-AHGIDFGTFEENVDACLKD 281 >gi|224500274|ref|ZP_03668623.1| hypothetical protein LmonF1_11609 [Listeria monocytogenes Finland 1988] Length = 166 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE ++ + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKDVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKVAS 137 NPLN YG +KLAGE+ Sbjct: 121 NPLNQYGIAKLAGEKVALE 139 >gi|121719189|ref|XP_001276315.1| NAD dependent epimerase/dehydratase family protein [Aspergillus clavatus NRRL 1] gi|119404513|gb|EAW14889.1| NAD dependent epimerase/dehydratase family protein [Aspergillus clavatus NRRL 1] Length = 314 Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 65/313 (20%), Positives = 111/313 (35%), Gaps = 34/313 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 L+ G G + + + + + R + DL K D + P + Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRANPPTILKADLEKDGDIRNLLDEAKPQI 64 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPI 112 +I+ AA + D + PE A +N E +A+ A S IYISTDYVF G P Sbjct: 65 VIHCAANRSPDLCDKNPEEARGVNVEATRILAEEASSRKALMIYISTDYVFSGKEGEAPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------SNFLLSM 162 + + ++P N+YG+ K GE V T VILR +Y + + ++ Sbjct: 125 EADAESHPTNLYGQLKRDGELAVLEATKETGLGVILRVPVLYGTAQSNSESAVNCLIDAV 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGPV 220 + E+ + + PT+ +AR I ++ L I +++ Sbjct: 185 WKSQDEKAGVKMDDWAQRYPTNTEDVARVCRDIVVKYLKQRPRIHELPKILQFSSEDRMT 244 Query: 221 SWADFAEYIFWESAERGGPY--SKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + I + AE G V RP + L L + +T Sbjct: 245 KY-----EICEKLAEVLGLSLVGMVRNKQGNDPNASVQRPYDTHLSTKALKDLGIDVQTT 299 Query: 279 -----WKEGVRNI 286 W++ + Sbjct: 300 DFVAWWRKNLGAY 312 >gi|260836799|ref|XP_002613393.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae] gi|229298778|gb|EEN69402.1| hypothetical protein BRAFLDRAFT_68401 [Branchiostoma floridae] Length = 493 Score = 164 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 34/288 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV--EIIRVG------RP-------DIDLLKPKDFASFF 46 + L+IG +GQ+ +L ++ EI+ +G R + Sbjct: 187 RYLIIGASGQVGGALMEALLRHRSKEIVAIGTCNSNPREGMIPFCLEEAGRSEDACRDLL 246 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P V+ AA+T D E EPE A +N +A+ A I ++ STDYVF G Sbjct: 247 TMVRPSVVFICAAFTWTDGCEREPEKAQLVNCTAVVNLAQCAKVINSKVVFYSTDYVFPG 306 Query: 107 -----LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--SNFL 159 E P PL YG++K E+K+ + +ILRT+ V+ NF+ Sbjct: 307 SDGDDTPGGGYSESCPCRPLQTYGETKYRAEQKLLTVHPQALILRTSTVFGPEEQGKNFV 366 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 ++ +++++ + TPT +A +++ N GI+H+ D Sbjct: 367 YQLVSNVTSGKDMAL-TNVKCTPTYNRDLAAMTLKLIEN-------GCSGIYHVIGDEAM 418 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 +FA + + G SK+ ++ RP + L K Sbjct: 419 AK-MEFATRV---ARCLGIDTSKLRVTSDNDGGSRCKRPKDAILSSEK 462 >gi|322696186|gb|EFY87982.1| NAD dependent epimerase/dehydratase family protein [Metarhizium acridum CQMa 102] Length = 327 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 119/321 (37%), Gaps = 44/321 (13%) Query: 4 LVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD-IDLL-------KPKDFASFFLSFSP 51 LV G G + + +++ Q DV+ I R D +D+L + + P Sbjct: 10 LVTGATGLLGREITAAFRQSPKWDVKGIGYSRADGVDILKVNLENEDLNELNTVIDETKP 69 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 VI++ AA D+ + +PE A ++N + +A+ A S I IYISTDYVF G Sbjct: 70 HVIVHSAAQRFPDRVDKDPEGARALNIAASRRLAQVALSRDILLIYISTDYVFPGIPGDA 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSN------- 157 P + + P N+YG++K GE + ++LR +Y + Sbjct: 130 PYEADATPKPTNLYGQTKFDGERAILEEAAKVGKPGSAIVLRVPVLYGHAETPAESAVNV 189 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG----IFHM 213 + S+ + E +I + PT+ I R +A ++ + R I Sbjct: 190 LMDSVWKAQTEGAKIKMDHWAIRYPTNTEDIGRVCRDVAAKYLDANGPGHRKALPSILQF 249 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK--QYPTKAHRPAYSCLDCSKLANT 271 + + + I + G + T+ RP L L + Sbjct: 250 SGEDKMTKY-----EICQLFGQIMGLDTSNIEANTQGNDPNAAVQRPYDCHLSTKALQD- 303 Query: 272 HNIRIST------WKEGVRNI 286 I IST W+ +R Sbjct: 304 LGIDISTCNFVDWWRREIRAF 324 >gi|264680362|ref|YP_003280272.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262210878|gb|ACY34976.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 191 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 7/182 (3%) Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E T PL++YG++KL GE+++A+ ++I RT+WVY+ G NF +MLRLA+ER + Sbjct: 12 KEGDATGPLSVYGRTKLEGEQRIAATHCRHLIFRTSWVYAARGGNFAKTMLRLAQEREAL 71 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 SV+ DQ+G PT A IA ++ + G++H+ A G +W +A ++ Sbjct: 72 SVINDQWGAPTGADLIADVTAHAVRHMSAHDGDG--GLYHLVA-AGETNWHAYASHVIER 128 Query: 233 SA----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + + + T +PT A RP S LD KL T + + W++GV +L Sbjct: 129 AQSLRPDLDWKVQSIAAVPTTAFPTPAARPLNSRLDTQKLQATMQLHLPAWQQGVERMLR 188 Query: 289 NI 290 I Sbjct: 189 EI 190 >gi|46124817|ref|XP_386962.1| hypothetical protein FG06786.1 [Gibberella zeae PH-1] Length = 348 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 118/298 (39%), Gaps = 33/298 (11%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPD------IDLLKPKDFASFFLSFSPDV 53 LV G G + + +S+ +++ E+ G R D +DL + ++F P V Sbjct: 6 VLVTGATGLLGREVSAAFGLKNWEVKGTGFSRADGISTFKVDLGNENEVSTFLDETKPQV 65 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 I++ AA DK + +PE A ++N + A+AK A IYISTDYVF G P Sbjct: 66 IVHCAAQRFPDKVDKDPEGARALNVAASKALAKLAAERDTFVIYISTDYVFPGVPGDAPY 125 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILRTAWVYS------IFGSNFLL 160 + + P N+YG++KL GE V V+LR +Y N L+ Sbjct: 126 EADAEPRPTNLYGQTKLDGERAVLETFKEAGKEGLGVVLRVPVLYGNAETPSESAVNVLM 185 Query: 161 SMLRLAK-ERREISVVCDQFGTPTSALQIARAIIQIAHNLIE---NSDTSLRGIFHMTAD 216 L A+ + +IS+ PT+ I R I+ ++ N+ SL I +++ Sbjct: 186 DALWKAQTQGAQISMDHWAIRYPTNTEDIGRVCHDISVKYLDTPSNNRASLPNILQFSSE 245 Query: 217 GGPVSWADFAEYIFWESAERGGPYSK-VYRIF-TKQYPTKAHRPAYSCLDCSKLANTH 272 + I E G ++ + RP L L + Sbjct: 246 DRMTKY-----EIVALFGEIMGLSTEGITPNTEGNDRNASVQRPYDCHLSTKALKDLG 298 >gi|297567134|ref|YP_003686106.1| dTDP-4-dehydrorhamnose reductase [Meiothermus silvanus DSM 9946] gi|296851583|gb|ADH64598.1| dTDP-4-dehydrorhamnose reductase [Meiothermus silvanus DSM 9946] Length = 240 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 98/281 (34%), Gaps = 43/281 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G +G++ +L + ++I ++D+ P P I++ AAY Sbjct: 1 MKLLLTGGSGRLGTALRGLMP---DLIAPSLRELDITDPSSIRRALERHQPQAIVHAAAY 57 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP 120 T V AE E + +N EG +A++A G+ ++ISTDYVF G E P P Sbjct: 58 TDVAGAERERAACWRVNVEGTRNLARSALERGLFFVHISTDYVFWGDVGG-YREDDPPGP 116 Query: 121 L-NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 + N Y +KL EE V + ++++RT++ S + + L ++ Sbjct: 117 VRNYYALTKLVAEEAVRA-VPRHLVIRTSFRPSPWPYPVAYTDLYTSQ------------ 163 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 I + + H+ + + A Sbjct: 164 -------DYLEVIAPEVALALGHLAQIPFDTLHIATERKSA--YELARR----------T 204 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 V + P LD + + W+ Sbjct: 205 RGDVLPGLRAD--SPVPLPEDISLDNRRWQSLK----REWR 239 >gi|317488784|ref|ZP_07947317.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325832150|ref|ZP_08165205.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] gi|316912089|gb|EFV33665.1| RmlD substrate binding domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486202|gb|EGC88655.1| putative dTDP-4-dehydrorhamnose reductase [Eggerthella sp. HGA1] Length = 723 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 109/291 (37%), Gaps = 33/291 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV---GRPDIDLLKP---KDFASFFLSFSPDVIIN 56 L+IG +G + + + + E+ G PD+ L P S F PD+++N Sbjct: 237 VLLIGASGFLGTKMKQILSRSFEVAGTCRKGSPDLYALDPIRKNQVISLFDVVKPDIVVN 296 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 + E+A+ +N I +A D+ I+ISTDYVFDG + Sbjct: 297 LVGMSDPSACLSNQELAYDLNVRVVENICEACDAFDSKLIHISTDYVFDGEKIGMYETDD 356 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLSMLRLAKERREI 172 P N YG +KL E+ V++ ++I+R +Y F ++ R + Sbjct: 357 SRLPKNYYGHTKLMAEDIVSAL-PRHLIVRVPILYGYNSESDKPTFFSKVIDDLGAGRSV 415 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 +Q P ++ A+ G+ H++++ PV+ +A I Sbjct: 416 LCDDEQIRYPALIDEVCFAVRD---------RVFDCGVVHLSSEE-PVTKYRWARII--- 462 Query: 233 SAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLANTHNIRISTWKEG 282 + E S + + A RP + L + + +EG Sbjct: 463 ADEFNLDESLLVP----ERDGLAKDRPRHVRLST----ESGGTVLGDAREG 505 >gi|330819507|ref|YP_004348369.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] gi|327371502|gb|AEA62857.1| DTDP-4-dehydrorhamnose reductase [Burkholderia gladioli BSR3] Length = 314 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 129/320 (40%), Gaps = 41/320 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD---------------------IDLL 37 MK +IG +G + +++++ V D ++ R +D+L Sbjct: 1 MKLALIGASGLLGRAVAAALVPRLDWRLLATVRDPGSAHALAAARIAGLDPAALTPLDVL 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 FF + PD +I AA D E +P A ++N + AIA A++IG + Sbjct: 61 DAGALDRFFATQRPDAVIVCAAERRPDVCERDPAAARALNVDAPAAIAARAEAIGAWTLA 120 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +STDYVFDG S P E +PLN YG+ K GE + + ++ LR +Y Sbjct: 121 MSTDYVFDG-SAPPYRETDLPSPLNAYGRGKADGEAALLAASSRACALRLPLLYGPAIDW 179 Query: 158 FLLSMLRL-----AKERR---EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 ++ L A R + + PT +A I+Q+A ++ G Sbjct: 180 ADSAVTSLVPAIVASSRDGAAPVEMDAWATRYPTWTPDVAEVIVQLAERHAAG--AAVTG 237 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + + D P++ + A I A G ++ + + RP LD S+L Sbjct: 238 LCQWSGDE-PMNKHEIATRI----AAALGIVPRLIAV--AEPKDATPRPRDCHLDSSRLE 290 Query: 270 NTHNIRISTWKEGVRNILVN 289 R + + E +R +L + Sbjct: 291 ALGIGRRTRFDEAIRAVLRD 310 >gi|296162447|ref|ZP_06845238.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] gi|295887260|gb|EFG67087.1| dTDP-4-dehydrorhamnose reductase [Burkholderia sp. Ch1-1] Length = 277 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 106/270 (39%), Gaps = 20/270 (7%) Query: 28 RVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA 87 G+ +D+ + F +PD ++ AA D E +P +A ++N + +A A Sbjct: 9 APGKIALDIRDARAVEQFVEREAPDALVITAAERRPDVCEHDPALARALNVDAVRTLAAA 68 Query: 88 ADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT 147 A+ G + ISTDYVFDG P S PLN YG SKL GE + T+ +LR Sbjct: 69 ANRRGAWTLSISTDYVFDGT-HPPYQHDSVPAPLNAYGHSKLEGERALMESTDLGCVLRL 127 Query: 148 AWVYSIFGSN--------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 +Y S A + + PT +A I Q+ Sbjct: 128 PLLYGPIVSWAESAVTSLVPAIAASAAPAGQPAVMDAWAIRYPTFTPDVAFVIRQMLE-- 185 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA-HRP 258 + ++RGI + D P++ + A + AE + + T PT A RP Sbjct: 186 LHARGDAIRGIVQWSGDE-PMNKYEIAVRL----AEALQLDAHLTPQCT---PTDATPRP 237 Query: 259 AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 L ++L R + + +R +L Sbjct: 238 HNCHLASTRLEALGIGRRTPFDMAIRQVLA 267 >gi|163846690|ref|YP_001634734.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222524495|ref|YP_002568966.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] gi|163667979|gb|ABY34345.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aurantiacus J-10-fl] gi|222448374|gb|ACM52640.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus sp. Y-400-fl] Length = 285 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 69/301 (22%), Positives = 118/301 (39%), Gaps = 39/301 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD------------IDLLKPKDFASFFLS 48 + L+ G G + Q+L V+I +DL + Sbjct: 5 RYLITGGTGYLGQALIRHARCLGVQIAATFHSQTPPALAEVAWHPLDLRDAAAVMALIRE 64 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P VI++ A + D P++ ++ EGAG +A AA IG I++S+D +FDG Sbjct: 65 VQPTVIVHTA-FRQYD-----PDL-MAVTGEGAGHVAVAAAQIGARLIHMSSDVIFDGEK 117 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM-LRLAK 167 P E P NP+ YG++K E V + I+RT+ +Y + + L +A+ Sbjct: 118 GEPYTEDDPPNPITDYGRAKARAEALVQAAYPAAAIVRTSLIYGFEPMDRHTAFALAVAR 177 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R + D+F P +A A+I +A RG+ ++ +S ++ Sbjct: 178 GERPERLFRDEFRCPIFVDDLAVALIDLAQR-------DYRGVINLAG-AEILSRYEWGC 229 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G + ++ + PT RP LD S+ R+ G R +L Sbjct: 230 ---LLAQAYGLDPGLIRGAWSAESPTP--RPRNCALDISRARQ-LGFRLR----GAREVL 279 Query: 288 V 288 Sbjct: 280 Q 280 >gi|255030408|ref|ZP_05302359.1| hypothetical protein LmonL_17331 [Listeria monocytogenes LO28] Length = 137 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV G NGQ+ L + + ++ + + +D++ L P+ II+ AA Sbjct: 1 MSILVTGANGQLGTELVQLLKEHNLTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAA 60 Query: 60 YTAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 +T V+ AEDE + + +N +G I++AA+ +G +YISTDYVFDG + T Sbjct: 61 FTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKT 120 Query: 119 NPLNIYGKSKLAGEEKV 135 NPLN YG +KLAGE+ + Sbjct: 121 NPLNQYGIAKLAGEKLL 137 >gi|226291193|gb|EEH46621.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb18] Length = 323 Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 113/321 (35%), Gaps = 41/321 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--------------VEIIRVGRPDI-----DLLKPKDFA 43 L+ G G + + + + +D D DL + Sbjct: 5 VLITGATGLLGRQVLNAFERDSLNWKTIGQGFSRAGPGTAASDTDAEIIKADLTDESEIV 64 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 + P V+++ AA DK + + + A IN ++A+ + I IYISTDYV Sbjct: 65 ALLDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAATKSLARETSARSILLIYISTDYV 124 Query: 104 FDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGS--- 156 F G P + + T P NIYG++K GE V T V+LR +Y Sbjct: 125 FPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQSGLGVVLRVPVLYGPTKQNSE 184 Query: 157 ---NFLLSMLRLAKE-RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGI 210 N L+ + A++ I + PT + R IA + + + +L I Sbjct: 185 SAVNVLVDAVWKAQDVNAGIKMDDWAIRYPTHTADVGRVCHDIAVKYLGDEEDVKALPRI 244 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +++ + + + G P + + P + RP + L +L Sbjct: 245 LQFSSEDRMTK-YEICQ---KLAEILGLPLPGMIPVKEGPKPGEVQRPYDTHLSTRELQR 300 Query: 271 TH-NIRIST----WKEGVRNI 286 + + W+ +R Sbjct: 301 IGIGVETQSFIAWWRRELRAF 321 >gi|67902090|ref|XP_681301.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4] gi|40740464|gb|EAA59654.1| hypothetical protein AN8032.2 [Aspergillus nidulans FGSC A4] gi|259480783|tpe|CBF73741.1| TPA: NAD dependent epimerase/dehydratase family protein (AFU_orthologue; AFUA_5G02240) [Aspergillus nidulans FGSC A4] Length = 314 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 110/310 (35%), Gaps = 32/310 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 LV G G + + + + + R + DL KP D P + Sbjct: 5 VLVTGATGLLGRQVFDKFKRSGCLTVGQGFSRANPPTILKSDLEKPDDIKGLLDEAKPQI 64 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPI 112 +I+ AA + D + +PE A +N + +A+ I +YISTDYVF G P Sbjct: 65 VIHCAANRSPDLCDKDPERARRVNVDATRTLAELTAERNILLVYISTDYVFPGVEGEAPY 124 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------SNFLLSM 162 + +PT P N+YG+ K GE+ V T +ILR +Y + + S+ Sbjct: 125 EADAPTKPPNLYGELKRDGEQVVLEATKKSGMGIILRVPVLYGTANENSESAVNTLVDSV 184 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL--RGIFHMTADGGPV 220 + E I + PT+ +AR + I ++ + I +++ Sbjct: 185 WKAQDENAGIKMDDWAQRYPTNTEDVARVLRDIVIKYLKERGQIMKLPKILQFSSEDKMT 244 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST-- 278 + E + RP + L +K+ I + T Sbjct: 245 K-YEMCEKFAEILGVSLKGMVRNKE--GNDPNASVQRPYDTHLS-TKVLKDLGIDVQTVD 300 Query: 279 ----WKEGVR 284 W++ + Sbjct: 301 FVDWWRKHLE 310 >gi|39947805|ref|XP_363047.1| hypothetical protein MGG_08631 [Magnaporthe oryzae 70-15] gi|145010254|gb|EDJ94910.1| hypothetical protein MGG_08631 [Magnaporthe oryzae 70-15] Length = 335 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 62/328 (18%), Positives = 111/328 (33%), Gaps = 47/328 (14%) Query: 2 KCLVIGNNGQIAQSLSS--MCVQDVEIIRV--GRPD------IDLLKPKDFASFFLSFSP 51 + LV G G + + ++ + R D DL + P Sbjct: 10 RALVTGATGLLGREVAKAFQLKHGWTVTGTAFSRADGVSTLRADLANEAEVEKVLDQVKP 69 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 V+++ AA DK + +PE +N ++A+ + IYISTDYVF G Sbjct: 70 HVVVHCAANRFPDKVDQDPEGTRRLNVAATASLARLCADRDVALIYISTDYVFSGRPGEA 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVA---SYTNNYVILRTAWVYSIFGSN------FLLS 161 P + T P N+YG++KL GE+ V + V++R +Y + L+ Sbjct: 130 PYAAGAATGPTNLYGQTKLDGEKAVLEEMAAKGRGVVMRVPVLYGHAETPGESAVNVLMD 189 Query: 162 MLRLAKERRE-ISVVCDQFGTPTSALQIARAII---------------QIAHNLIENSDT 205 + ++E I + PT+ + R +A ++ D Sbjct: 190 AVWKSQEAETKIKMDHWAIRYPTNTEDVGRVCAGSKGWLTMVFAFLLQDVAEKYVDAQDA 249 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT-KQYPTKAHRPAYSCLD 264 + ++ + + +F E G + RP L Sbjct: 250 KSLPKVLQFSSEDKLTKYEICQ-VFGEI--MGLSIEGIEANTQGNDPNASVQRPYDCHLS 306 Query: 265 CSKLANTHNIRIST------WKEGVRNI 286 +L + I +ST W+ V+ Sbjct: 307 TKELKD-LGIDVSTQDFGDWWRREVKAF 333 >gi|313114188|ref|ZP_07799740.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623597|gb|EFQ07000.1| NAD-binding domain 4 [Faecalibacterium cf. prausnitzii KLE1255] Length = 280 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 61/298 (20%), Positives = 113/298 (37%), Gaps = 36/298 (12%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G G + + E+ + + + + PDVI++ AA + Sbjct: 3 KILITGAGGFVGSRILQQWQGKYELCALPKGFFCTADEALTRAQVEALHPDVILHTAALS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 P A+ N E +A+AA + S+D V+ G + P+ E +P Sbjct: 63 DTSYCAQHPAEAYRANVELPVWLARAAQQTKAKLVAFSSDQVYAGVQQQGPLPETLALHP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 NIYG+ KL E++V + V LR +W+Y + N L++LR A + + Sbjct: 123 ANIYGQYKLKAEQRVLELCPDSVHLRASWMYDLPGYGLPIRGNLPLNLLRAALKGEALRF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM---TADGGPVSWADFAEYIFW 231 + T Q+ + E + T G+++ A+ + FAE + Sbjct: 183 SRNDHRGVTYVRQVIENL--------EPAMTLPGGVYNFGSGNAENMVCTARQFAETL-- 232 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 G ++ + + +D +KL IR T ++G++ L + Sbjct: 233 ------GIAVQIEE---ESWGR------NLVMDTTKLER-FGIRFDTTQQGIQRCLKD 274 >gi|309778182|ref|ZP_07673116.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 3_1_53] gi|308914053|gb|EFP59859.1| putative dTDP-4-dehydrorhamnose reductase [Erysipelotrichaceae bacterium 3_1_53] Length = 289 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 20/295 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K ++ G NG IA + +EI+ + R D+DL + +F + D + + A Sbjct: 3 KIVITGGNGFIASLVKEALHDTMEIVSLTRKDLDLGDIEAVRKWFTEHAYDYVFHTGAMA 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR-TPIDEFSPTNP 120 E+ PE+ IN E IAKA I+IST+ F+G + P E +P Sbjct: 63 QTADCENYPELTHRINVECTQEIAKACQDKKARLIFISTEQCFNGKTEAGPFHEDTPLCS 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG------SNFLLSMLRLAKERREISV 174 + YG K+ E + S ++YVILR +W+ + N + +++ ++ Sbjct: 123 VTAYGNHKVECERFITSMLDSYVILRFSWMLGMSRPGIKASPNIIRNVMNAVFYQQPTKF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 ++ T A ++A +I GI+H++ + + A+ + + Sbjct: 183 TVNEIRGMTYAQKLADVFDKILEL--------PTGIYHVSDTNTHNT-YESAKIV---AQ 230 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + G ++ + A R L KL H I +++E V L + Sbjct: 231 KLGCTQEQIDAYILPNHERYADRFRDYRLHTDKLK-AHGIDFGSFEENVDACLKD 284 >gi|149200332|ref|ZP_01877351.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155] gi|149136568|gb|EDM25002.1| hypothetical protein LNTAR_03704 [Lentisphaera araneosa HTCC2155] Length = 288 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 117/301 (38%), Gaps = 34/301 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRV-------------GRPDIDLLKPKDFASFFLS 48 K L+ G +G + L+++ +D E+ GR DL K + S Sbjct: 4 KVLITGIHGFLGTELANVLSEDYEVYGTYFNSSATSSSHKTGR--CDLRKLSEVKSVLDR 61 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P + + AA + + + E +++ IN + +++ GI ++ STD VFDG Sbjct: 62 VRPSKVFHLAALSDPNTCDREAKLSEEINFLASRLLSELCAERGIKLLFTSTDLVFDGRK 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN--FLLSMLRLA 166 E NPL+ Y + KL EE V ++ I R +YS + + + Sbjct: 122 GN-YSEEDEVNPLSRYAEHKLMAEE-VMKGNDSASICRMPLMYSTADNKRSMVYGIKEKL 179 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K R ++ + D++ + ++A+++++ + G+ H+ S + Sbjct: 180 KNREQVGLFTDEYRSAAHVNCASKALMKVSSLEL--------GLVHLGGPLRE-SRYEMG 230 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS-KLANTHNIRISTWKEGVRN 285 I + P + K A RPA D S ++ I++ + E + Sbjct: 231 LLI---AEAFSLPKYFIKPCLQKDVKMAAERPADVSFDNSVAISKA--IQLRSLSENLSK 285 Query: 286 I 286 + Sbjct: 286 L 286 >gi|47221410|emb|CAF97328.1| unnamed protein product [Tetraodon nigroviridis] Length = 315 Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 107/303 (35%), Gaps = 49/303 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + LV G G + +++ +I VG RP DL + PDV Sbjct: 30 RVLVTGATGLLGRAVCREFQSSSWVVIGVGFRRARPGILRCDLTDGDAVRGLLQDYKPDV 89 Query: 54 IINPAAYTAVDKA--EDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +I+ AA + E S K A + G +YISTDYVFDG P Sbjct: 90 VIHCAAERRP-RCGGEAHRSGCESKTCTPPAHSPKEAAACGAFFLYISTDYVFDGR-NPP 147 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS------NFLLSMLRL 165 E NPLN+YG+SKL GE++ V+LR ++ + L ++ Sbjct: 148 YGEDDTPNPLNVYGRSKLEGEQETLRCCPGAVVLRVPVLFGEVETVSESAVTCLWLQVQQ 207 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 A E + + + + ++S H +A Sbjct: 208 AAEGSTLDHIQQRTR--------------------PSEESS-----HFSAKEQMTK-YQM 241 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA-NTHNIRISTWKEGVR 284 A I + P + + T+Q RP S L+CS+L ++ + + Sbjct: 242 AVAI---AQAFNLPSDHLIPL-TEQPAASTLRPMNSRLNCSRLELLNLSVEARPFAAAIV 297 Query: 285 NIL 287 + L Sbjct: 298 DSL 300 >gi|154285112|ref|XP_001543351.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150406992|gb|EDN02533.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 332 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 116/329 (35%), Gaps = 50/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIRVG------RPDID-------LLKPKDFASFFL 47 L+ G G + + + + +D ++ G R D+D LL + + Sbjct: 6 LITGATGLLGRQVLNAFERDSTNWNVVGQGFSRAGTRTDMDSEIVKADLLDEGEIVALLD 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 P+V+++ AA DK + P+ A IN ++A+A S I IYISTDYVF G Sbjct: 66 RTKPNVVVHCAANRFPDKCDQNPDAARKINVVATRSLARATSSRSILLIYISTDYVFPGR 125 Query: 108 -SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSI-------FGS 156 P + + T P NIYG++K GE V T V+LR +Y + Sbjct: 126 AGEAPYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVLYGPALQNSESAIN 185 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-----ENSDTSLRG-- 209 + ++ + + + PT + R IA + +D G Sbjct: 186 TLVDAVWKAQNANAGVQMDDWAIRYPTHTADVGRVCRDIAARYLSLFVGAAADREGDGGF 245 Query: 210 -------IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 I +++ + + + G P + + P + RP + Sbjct: 246 SFKTLPRILQFSSEDAMTKY----QICQTLAEILGLPLPGMMPLKDGPKPGEVQRPYDTH 301 Query: 263 LDCSKLANTHNIRIST-----WKEGVRNI 286 L +L + W+ + Sbjct: 302 LSTEELRRIGIDVQTQSFVAWWRRELHAF 330 >gi|261202802|ref|XP_002628615.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis SLH14081] gi|239590712|gb|EEQ73293.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis SLH14081] Length = 331 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 114/329 (34%), Gaps = 51/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIR--VGRPD-----------IDLLKPKDFASFFL 47 L+ G G + + + + +D ++ R DLL + + Sbjct: 6 LITGATGLLGRQVLNAFQRDSANWKVFGQGFSRASGTADSGVEIVKADLLDEGNIVALLE 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 P+V+++ AA DK + P A IN ++A+A S I IYISTDYVF G Sbjct: 66 QTKPNVVVHCAANRFPDKCDQNPAAARKINVAATQSLAQATSSRSILLIYISTDYVFPGR 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF----- 158 P + T+P NIYG++K GE V T V+LR +Y Sbjct: 126 PGEAPYATSAQTDPPNIYGETKRDGEVAVLEQTRESRLGVVLRVPVLYGPAQQASESAVN 185 Query: 159 --LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-------------ENS 203 + ++ + I + PT + R IA + + Sbjct: 186 VLVDAVWKAQDAGAGIKMDDWAIRYPTHTADVGRVCRDIAVKYLAGAGAVGAGAPSNDGE 245 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 SL I +++ + + + G P + + P + RP + L Sbjct: 246 LKSLPRILQFSSEDRMTKY----QICQKLAEILGLPLPGMIPVREGPKPGEVQRPFDTHL 301 Query: 264 DCSKLANTHNIRIST------WKEGVRNI 286 +L I + T W++ + Sbjct: 302 STEELKRI-GIEVGTQSFEAWWRKELHAF 329 >gi|328854011|gb|EGG03146.1| hypothetical protein MELLADRAFT_90437 [Melampsora larici-populina 98AG31] Length = 340 Score = 159 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 111/288 (38%), Gaps = 31/288 (10%) Query: 10 GQIAQSLSSMCVQDVEII---RVGRPD-----IDLLKPKDFASFFLSFSPDVIINPAAYT 61 G + +++ + + I+ R IDL +F P+++++ AA Sbjct: 48 GLLGRAVVAHLKKQGHIVKGLAFSRATDELEKIDLRDTTAIEELIKNFKPNLLVHCAAER 107 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNP 120 D AE +PE +N + + +A+ + IYI TDYVFDG + D NP Sbjct: 108 RPDVAEKDPEGTKQLNVDISKHLAELSKRYSFRLIYICTDYVFDGNAPEGGYDVNDKPNP 167 Query: 121 LNIYGKSKLAGEEKVASYTNNYVI--LRTAWVYSIFGSNF------LLSMLRLAKERREI 172 N+YG++KLAGE+ + + LR +Y N L+ ++ + + I Sbjct: 168 TNLYGETKLAGEKAILDSGEKGQVLSLRVPVLYGKAERNDESAINILIDGVKKSSQGYSI 227 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + PT +A+ I Q+A + I H ++ A +F Sbjct: 228 KMDDWATRYPTLVDDVAKVISQLA-----SFQKPYPPILHFSSQKMYTK-YSIAV-VF-- 278 Query: 233 SAERGGPYSKVYRIFTKQYPTKAH--RPAYSCLDCSKLANTHNIRIST 278 + P + R+ + P RP L + T I +ST Sbjct: 279 ANLLNLPIDNLVRV--SEGPKAGETIRPRDCRLSTKSIE-TLGIDVST 323 >gi|325093589|gb|EGC46899.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H88] Length = 332 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 116/329 (35%), Gaps = 50/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIRVG------RPDID-------LLKPKDFASFFL 47 L+ G G + + + + +D + G R D+D LL + + Sbjct: 6 LITGATGLLGRQVLNAFERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLDEGETVALLE 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 P+V+++ AA DK + P+ A IN ++A+A S I IYISTDYVF G Sbjct: 66 RTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRSLARATSSRSILIIYISTDYVFPGR 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------S 156 P + + T P NIYG++K GE V T V+LR +Y + Sbjct: 126 PGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRGCGLGVVLRVPVLYGPARQNSESAIN 185 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-----ENSDTSLRG-- 209 + ++ + + + PT + R IA + +D G Sbjct: 186 TLVDAVWKAQDANAGVQMDDWAIRYPTHTADVGRVCRDIAARYLSLFVGAAADREDDGGF 245 Query: 210 -------IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 I +++ + + + G P + + P + RP + Sbjct: 246 SFKSLPRILQFSSEDAMTKY----QICQTLAEILGLPLPGMMPVKDGPKPGEVQRPYDTH 301 Query: 263 LDCSKLANTHNIRIST-----WKEGVRNI 286 L +L + W++ + Sbjct: 302 LSTEELRRIGIDVQTQSFVAWWRKELHAF 330 >gi|240277510|gb|EER41018.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus H143] Length = 332 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 116/329 (35%), Gaps = 50/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIRVG------RPDID-------LLKPKDFASFFL 47 L+ G G + + + + +D + G R D+D LL + + Sbjct: 6 LITGATGLLGRQVLNAFERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLDEGETVALLE 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 P+V+++ AA DK + P+ A IN ++A+A S I IYISTDYVF G Sbjct: 66 RTKPNVVVHCAANRFPDKCDQNPDAARKINVAATRSLARATSSRSILIIYISTDYVFPGR 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------S 156 P + + T P NIYG++K GE V T V+LR +Y + Sbjct: 126 PGEAPYEASAKTEPPNIYGETKQDGEVAVLEETRECGLGVVLRVPVLYGPARQNSESAIN 185 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-----ENSDTSLRG-- 209 + ++ + + + PT + R IA + +D G Sbjct: 186 TLVDAVWKAQDANAGVQMDDWAIRYPTHTADVGRVCRDIAARYLSLFVGAAADREDDGGF 245 Query: 210 -------IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 I +++ + + + G P + + P + RP + Sbjct: 246 SFKSLPRILQFSSEDAMTKY----QICQTLAEILGLPLPGMMPVKDGPKPGEVQRPYDTH 301 Query: 263 LDCSKLANTHNIRIST-----WKEGVRNI 286 L +L + W++ + Sbjct: 302 LSTEELRRIGIDVQTQSFVAWWRKELHAF 330 >gi|303319489|ref|XP_003069744.1| RmlD substrate binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240109430|gb|EER27599.1| RmlD substrate binding domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 309 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 118/300 (39%), Gaps = 40/300 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RP------DIDLLKPKDFASFFLSFSP 51 K LV G +G + + + + +DV VG R DL P + S P Sbjct: 4 KALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPHIVKADLTNPSEIESLLAEVKP 63 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 V+++ Y + + P++A +N E A+AKA I IYISTDYVF G Sbjct: 64 QVVVH---Y----QCDAHPDLARKVNVEATKALAKATLQRSILLIYISTDYVFPGRPGEA 116 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFGSNF-------LL 160 P + S T P NIYG++KL GE V T V+LR +Y +N + Sbjct: 117 PYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRVPVLYGSADTNSESAVNVLID 176 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI--ENSDTSLRGIFHMTADGG 218 ++ + ++ + PT+ + R IA + + S I +++ Sbjct: 177 AVWKAQAADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKYLGEQERAASFPTILQFSSED- 235 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK---AHRPAYSCLDCSKLANTHNIR 275 V+ + E + G P S + RI KQ T RP + L L I Sbjct: 236 KVTKYEMCE---RFAEILGLPLSGMERI--KQGGTPGNGVQRPFDTHLSTKALKE-LGIP 289 >gi|255084107|ref|XP_002508628.1| predicted protein [Micromonas sp. RCC299] gi|226523905|gb|ACO69886.1| predicted protein [Micromonas sp. RCC299] Length = 327 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 132/328 (40%), Gaps = 47/328 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPDID---------LLKPKDFASF---- 45 M+ L++G +G + Q L ++ + E+I VG D L K +F Sbjct: 1 MRVLIVGGSGYLGQFLLKYLLERPEDEVIAVGYTYADENAGPIDHPLTKIDRCRAFRVDA 60 Query: 46 ---------FLSFSP-DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP- 94 + +P D+++N AA ++ K E E E+A ++N + + Sbjct: 61 ATGEGMDACVRAMAPLDLVVNCAAMSSPGKCEKEAELAMNLNV--PTHLCRTLLEHNQKS 118 Query: 95 ------CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT--NNYVILR 146 +++STD V+DG S +++ + +P+N YG+SKL E +A +V LR Sbjct: 119 EAIAPLLVHLSTDQVYDGESPNSVEDVNAPSPVNTYGRSKLNAELHIAENYVAGRHVSLR 178 Query: 147 TAWVYS-------IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 ++ + + F ++ K ++ D++ P +A+ I I+ ++ Sbjct: 179 SSIITGSQPPLRPVSRPLFHDFIVNSLKGDEAVTFFEDEYRCPIAAVDIVAHIVALSKLA 238 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 +++ T ++M +S D A + G + V + + PA Sbjct: 239 GKDAKTDWLMRYNM-GGPDRLSRVDMAR---QTAEVLGVSDANVEAVSSASVDRGVISPA 294 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNIL 287 + +KL + + WK+ +R L Sbjct: 295 DISMLSNKLNSLTLVSPMGWKDQMRLAL 322 >gi|239612427|gb|EEQ89414.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ER-3] gi|327355230|gb|EGE84087.1| NAD dependent epimerase/dehydratase [Ajellomyces dermatitidis ATCC 18188] Length = 331 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 67/329 (20%), Positives = 114/329 (34%), Gaps = 51/329 (15%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIR--VGRPD-----------IDLLKPKDFASFFL 47 L+ G G + + + + +D ++ R DLL + + Sbjct: 6 LITGATGLLGRQVLNAFQRDSANWKVFGQGFSRASGTADSGVEIVKADLLDEGNIVALLE 65 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG- 106 P+V+++ AA DK + P A IN ++A+A S I IYISTDYVF G Sbjct: 66 QTKPNVVVHCAANRFPDKCDQNPAAARKINVAATQSLAQATSSRSILLIYISTDYVFPGR 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF----- 158 P + T+P NIYG++K GE V T V+LR +Y Sbjct: 126 PGEAPYAASAQTDPPNIYGETKRDGEVAVLEQTRESRLGVVLRVPVLYGPAQQASESAVN 185 Query: 159 --LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-------------ENS 203 + ++ + I + PT + R IA + + Sbjct: 186 VLVDAVWKAQDAGAGIKMDDWAIRYPTHTADVGRVCRDIAVKYLAGAGAVGAGAPSNDGE 245 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 SL I +++ + + + G P + + P + RP + L Sbjct: 246 LKSLPRILQFSSEDRMTKY----QICQKLAEILGLPLPGMIPVREGPKPGEVQRPFDTHL 301 Query: 264 DCSKLANTHNIRIST------WKEGVRNI 286 +L I + T W++ + Sbjct: 302 STEELKRI-GIEVGTQSFEAWWRKELHAF 329 >gi|312220379|emb|CBY00320.1| similar to NAD dependent epimerase/dehydratase family protein [Leptosphaeria maculans] Length = 282 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 24/259 (9%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +D+L ++ P V+++ AA D +PE A +N E + ++A+A + GI Sbjct: 8 LDVLDRREIERVLDETKPKVVVHCAANRFPDSCTADPEAAVKLNVESSRSLAEATVARGI 67 Query: 94 PCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY------VILR 146 IYISTDYVF G P SPT+P N+YG++KL GE+ V N V+LR Sbjct: 68 FLIYISTDYVFSGRPDEAPYKVDSPTSPPNVYGQTKLDGEKAVLQVARNSGARNIVVVLR 127 Query: 147 TAWVYSIFGSN------FLLSMLRLAKE----RREISVVCDQFGTPTSALQIARAIIQIA 196 +Y L+S L A+ + +I V PT+ + R IA Sbjct: 128 VPVLYGSADEPKDSAVNVLMSQLWAAQNIAPGQPKIQVDDYALRYPTNTQDVGRVCRDIA 187 Query: 197 HNLIE--NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI-FTKQYPT 253 ++ N+D +L I +++ W + + G P + + + Sbjct: 188 KVYLDPANADRNLPQILQFSSEDCMTKW----QICQKFAEIMGLPLDNMEPVKPEEDTKD 243 Query: 254 KAHRPAYSCLDCSKLANTH 272 RP LD S L Sbjct: 244 GTVRPYDCHLDTSALKELG 262 >gi|149277579|ref|ZP_01883720.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] gi|149231812|gb|EDM37190.1| dTDP-4-dehydrorhamnose reductase [Pedobacter sp. BAL39] Length = 293 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 69/288 (23%), Positives = 107/288 (37%), Gaps = 31/288 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDI-----------DLLKPKDFASFFL 47 MK L+ G NG + + + VE+ R DL + + F Sbjct: 1 MKILITGINGMLGGHIKQSLLSMDMVELYGASRTAASENIPQEYMIGDLTVLESYTR-FK 59 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + DVI++ AA + E + +A N + ++ IYISTD VFDG Sbjct: 60 NIHFDVIVHCAAEVNLSLCEKDWAVAELANVTSTSLLT--SNLSFDRFIYISTDSVFDGS 117 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF---LLSMLR 164 E T+PLN Y SKL GE V S ++++LRT +Y + Sbjct: 118 KGN-YTETDQTHPLNNYALSKLKGEHVVTSSVGDFIVLRT-NIYGASNPMRNSLFEWAYK 175 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 E R I+ + P Q+ I +I I GI++ + D G +S + Sbjct: 176 ELSEGRAINGYDNVIFNPLYIGQLTNIIKKIICEGI------PPGIYNASCD-GHISKFE 228 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 F I + G K+ + RP + L+ KL + Sbjct: 229 F---IIQLARMFGLNEKKIQPMSMNVEDELLKRPLNTSLNNRKLKSVL 273 >gi|254443027|ref|ZP_05056503.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] gi|198257335|gb|EDY81643.1| NAD dependent epimerase/dehydratase family [Verrucomicrobiae bacterium DG1235] Length = 305 Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 111/305 (36%), Gaps = 28/305 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP------------DIDLLKPKDFASFFL 47 MK L+ G +G + + + + ++I + +DL + L Sbjct: 1 MKILLTGASGLLGSAFARSAKRRGHQVIGIHHQNPAPSSDLAQTRTLDLTDLNALEALTL 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 PD I+N AA + E +P + +N +A A + I+IS++ VFDG Sbjct: 61 EHFPDAIVNCAAISEPSACEAKPTHSRLVNVALPEKLALLARHLFATLIHISSEQVFDGT 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-VILRTAWVYSIFGSNFLLSMLRL- 165 + SP +P N Y + KL E +V + LR + + RL Sbjct: 121 AHI-YHRDSPPSPPNEYARQKLDSELRVHELAAEFATTLRLPLLIGNSPTGTRSLHERLF 179 Query: 166 --AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + + D++ P A A A++++ L+G++ +S Sbjct: 180 ASWAAGQPTPLFTDEYRQPCLADNAADAMVELCER------NDLKGVYSWAGQK-TLSRY 232 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGV 283 + + I G P + + P AHR A D + LA+ + + + Sbjct: 233 EIGQRILKH---FGLPETLIQAAQRGDDPRFAHRQARLSFDLAPLASKLKTQPQGLSDQL 289 Query: 284 RNILV 288 ++V Sbjct: 290 DALIV 294 >gi|257439864|ref|ZP_05615619.1| NAD dependent epimerase/dehydratase family protein [Faecalibacterium prausnitzii A2-165] gi|257197677|gb|EEU95961.1| NAD dependent epimerase/dehydratase family protein [Faecalibacterium prausnitzii A2-165] Length = 277 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 67/288 (23%), Positives = 111/288 (38%), Gaps = 38/288 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G++G + + E+ R + F + PDVI++ AA + Sbjct: 3 KILISGSSGFVGSRVLHQWQGRAELFTFPRGSLAAADESAIRRFVETVQPDVILHLAALS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 + PE + NAE +AKAA G I S+D V+ G P+ E P +P Sbjct: 63 DTGYCQQHPEESQRANAELPVWMAKAARDTGAKLISFSSDQVYAGVTQPGPLPETLPLSP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 N YG+ KL EE+V + V+LR W+Y + N L++L+ A+ + Sbjct: 123 ANTYGQHKLEAEERVLALCPEAVLLRAPWMYDLPGDGLPLRGNLPLNLLQAAQNGTPVRF 182 Query: 175 -VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM--TADGGPVSWA-DFAEYIF 230 D G + R +++ ++ G+++ D V+ A FAE + Sbjct: 183 SPHDHRG-----VSWVREVVEHLFPALQLPG----GVYNFGSGNDADMVTTARQFAEAL- 232 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 G ++ + +D SKLA IR Sbjct: 233 -------GVQVQIEP---ADFSR------NLVMDSSKLAAQ-GIRFHD 263 >gi|229815499|ref|ZP_04445830.1| hypothetical protein COLINT_02550 [Collinsella intestinalis DSM 13280] gi|229808936|gb|EEP44707.1| hypothetical protein COLINT_02550 [Collinsella intestinalis DSM 13280] Length = 227 Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 20/233 (8%) Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 ++ NA G +A+ G+ +++S+DYVFDG E P +PL++YG+SK AG Sbjct: 1 ACWAANAAGPALMARTCAEHGMTLVHVSSDYVFDGTVGN-HPEGEPLSPLSVYGQSKAAG 59 Query: 132 EEKVASYTNNYVILRTAWVYSI---FGSNFLLSMLRLAKERREI---SVVCDQFGTPTSA 185 + VA + ++R++WV F R+A + +VV DQ G T Sbjct: 60 DLAVAG-CPRHYVVRSSWVIGDGRNFVKTMRSLSDRVADASDALERVTVVDDQLGRLTFT 118 Query: 186 LQIARAIIQIAHNL---IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSK 242 Q+A I+ + +E S + G +++T G SWA A +F + G Sbjct: 119 DQMAEGILHLLGYRDGDVEPSAPAEYGTYNLTGSGPVESWAGIAARVFDLANGNG---EA 175 Query: 243 VYRIFTKQYPTK-----AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 V + T +Y A RPA+S LD SK+A W E + + + Sbjct: 176 VEPVATAEYYASAEGPIAPRPAHSDLDLSKIAAA-GFAPRDWTEELAEYMAAL 227 >gi|295659929|ref|XP_002790522.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb01] gi|226281699|gb|EEH37265.1| NAD dependent epimerase/dehydratase family protein [Paracoccidioides brasiliensis Pb01] Length = 323 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 112/321 (34%), Gaps = 41/321 (12%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--------------VEIIRVGRPDI-----DLLKPKDFA 43 L+ G G + + + + +D D DLL + Sbjct: 5 VLITGATGLLGRQVLNAFERDNLNWKTIGQGFSRAGPGTAATDTDAEIIKADLLDESEIV 64 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 P V+++ AA DK + + + A IN ++ + + I IYISTDYV Sbjct: 65 VLLDRTKPQVVVHCAANRFPDKCDLDQDAARKINVAATKSLVRETSARSILLIYISTDYV 124 Query: 104 FDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGS--- 156 F G P + + T P NIYG++K GE V T V+LR +Y Sbjct: 125 FPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQSGLGVVLRVPVLYGPTKQNSE 184 Query: 157 ---NFLLSMLRLAKE-RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD--TSLRGI 210 N L+ + A++ I + PT + R IA + + + +L I Sbjct: 185 SAVNVLVDAVWKAQDVNAGIKMDDWAIRYPTHTADVGRVCHDIAVKYLGDEEDIKALPRI 244 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +++ + + + G P + + P + RP + L +L Sbjct: 245 LQFSSEDRMTK-YEICQ---KLAEILGLPLPGMIPVKEGPKPGEVQRPYDTHLSTRELQR 300 Query: 271 TH-NIRIST----WKEGVRNI 286 + + W+ +R Sbjct: 301 IGIGVETQSFIAWWRRELRAF 321 >gi|297625075|ref|YP_003706509.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] gi|297166255|gb|ADI15966.1| NAD-dependent epimerase/dehydratase [Truepera radiovictrix DSM 17093] Length = 248 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 41/272 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + L+ G +G++ + L + +++ R ++DL +P A + P+V+++ AAYT Sbjct: 6 RILLTGGSGRLGRELQGLL----DLVAPPRSELDLTRPDTIAGALRRYRPEVVVHAAAYT 61 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDEFSPTNP 120 V AE + + N G + +A + G P ++ISTDYVF G R E P P Sbjct: 62 DVRGAESDRRRCWETNVGGTRNLVRALLAAGHPRLVHISTDYVFYGD-RGHYHEDDPPGP 120 Query: 121 L-NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 + N Y SKL EE VA +++++RT++ + + D + Sbjct: 121 VRNHYALSKLVAEE-VARLAPHHLVIRTSFRPREWPYE---------------TAFEDVY 164 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 + IA + + L + H+ + + +F + R Sbjct: 165 TSQDYVDVIAPELALVLKYLHDVP----YDTLHIATER---------KSVFELARRR--- 208 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 V + P LD S+ Sbjct: 209 RPDVRPGRKAE--AGVELPDDISLDTSRWREL 238 >gi|19705006|ref|NP_602501.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19712914|gb|AAL93800.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 292 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 115/283 (40%), Gaps = 26/283 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPDI------------DLLKPKDFASFFLS 48 K L++G+ G + L +Q+ ++I + + ++ DLL Sbjct: 3 KVLILGSCGMLGSVLCEYLLQNNYQVIGIDKINLENKFEKYKLYNIDLLDFFKVEEVIFQ 62 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P++IIN AA ++ E+ E+A ++ + + I IYISTD VFDG Sbjct: 63 EKPNIIINAAAIVNLNLCEENYELAELLHVDLNEQFLNLSKKISFKFIYISTDSVFDGTK 122 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 E PLN Y K+K GEE+V + VI + YS ++ L + Sbjct: 123 SN-YIEEDLAIPLNNYAKTKFLGEEEVKKMEDYIVIRTNIYGYSDRQNSLLKWAYDELNK 181 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 ++I + P S Q+A AI+ + + +GI ++ +D P+S +F + Sbjct: 182 NKKIYGYKNVIFNPVSIYQLADAILILIQK-------NFKGILNIVSDK-PISKFEFLKI 233 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 I ++ V + + RP + L K+ N Sbjct: 234 IEEYLKKKNLVQESVL----EDENSNLKRPKNTALSIKKMENI 272 >gi|219848619|ref|YP_002463052.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] gi|219542878|gb|ACL24616.1| dTDP-4-dehydrorhamnose reductase [Chloroflexus aggregans DSM 9485] Length = 473 Score = 155 bits (393), Expect = 7e-36, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 35/297 (11%) Query: 4 LVIGNNGQIAQSLSSMC-VQDVEIIRVGRPD------------IDLLKPKDFASFFLSFS 50 L+ G G + +L + + I+ +DL P Sbjct: 191 LITGGTGYLGNTLIRHARARGLPIVATFHRQTPPPSTDITWYPLDLRDPTAVRRLITEVQ 250 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 P VII+ A + EP++ +I EGAG +A AA IG I++S+D +FDG Sbjct: 251 PAVIIHTAFR------QYEPDL-MAITGEGAGHVAAAAAEIGARLIHMSSDVIFDGEKAG 303 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAKER 169 E P NP+ YG++K EE V + + I+RT+ +Y L +A+ Sbjct: 304 AYTEADPPNPITDYGRAKARAEELVQHHHPHAAIVRTSLIYGFDPLDRHSAFALAVARGE 363 Query: 170 REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI 229 R + D+ P +A L++ + + RG+ ++ +S ++ Sbjct: 364 RTEKLFYDELRCPVFVDDLA-------AALLDLAQSDYRGVINLAG-AETLSRYEWGR-- 413 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + G ++ + + PT RP LD S+ R+ +E +R + Sbjct: 414 -LLAQAHGLDPDRIVGALSAESPTP--RPRNCALDISRALG-LGYRLRGAREVLRTM 466 >gi|148658677|ref|YP_001278882.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] gi|148570787|gb|ABQ92932.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus sp. RS-1] Length = 282 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 39/300 (13%) Query: 2 KCLVIGNNGQIAQSLSSM-CVQDVEIIRV---GRPD--------IDLLKPKDFASFFLSF 49 + L+ G +G + L + Q +++ RP +DL Sbjct: 7 RLLITGGSGFLGARLVELALAQGWDVVATCHSRRPQTPGVRWETLDLRNAAATRRLVEQV 66 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 +PDV+I+ A Y + P++ +I EG+ A+A+ A ++ I++S+D VFDG Sbjct: 67 TPDVVIHTA-YRQ-----EGPDM-MAIIGEGSAAVAQGAFAVQARLIHLSSDVVFDGERI 119 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAK 167 E P+ YG +K E VA+ +I+RT+ +Y +L + Sbjct: 120 GRYTETDEPQPVTTYGAAKALSERLVAAAHPGALIVRTSLIYGGPDRPGRHERFVLDVLD 179 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R E D+ P +A A L+E + GI H+ VS +FA Sbjct: 180 GRAEAVFFTDELRCPIEVGDLAAA-------LLELATIDRSGIVHVAGSD-VVSRYEFAC 231 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + + G S + + P RP LD R+ GVR +L Sbjct: 232 LV---ARAFGRDPSGLCGGLS---PAAPRRPRNCALDSQVAQRMLTTRLR----GVREVL 281 >gi|67920275|ref|ZP_00513795.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH 8501] gi|67857759|gb|EAM52998.1| similar to methionine adenosyltransferase [Crocosphaera watsonii WH 8501] Length = 168 Score = 154 bits (391), Expect = 9e-36, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 12/162 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIR------VGRPD-----IDLLKPKDFASFFLSFS 50 K LV G +G + +L ++ ++ + + +D+ + + F Sbjct: 3 KLLVTGASGFLGYNLCQYAQENWQVYGSYYNHKLDSKNINFVKVDVTNIDELQTIFKQIK 62 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PD +I+ AA + + ++ PE ++ IN +G IAK + IPC++ STD VFDGL Sbjct: 63 PDAVIHLAAASKPNYCQNNPEDSYKINVTASGNIAKLCADVNIPCVFTSTDLVFDGL-NP 121 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 E P +P++ YG+ K+ E+++ VI R ++ Sbjct: 122 AYKESDPVSPISYYGEQKVKAEQEMLIIYPKTVICRMPLMFG 163 >gi|159491675|ref|XP_001703785.1| predicted protein [Chlamydomonas reinhardtii] gi|158270466|gb|EDO96311.1| predicted protein [Chlamydomonas reinhardtii] Length = 333 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 52/333 (15%) Query: 1 MKCLVIGNNGQIAQSL---------------------SSMCVQDVEIIRVGRPDIDLLKP 39 M L+ G +G + Q L S + + +DL Sbjct: 1 MNVLITGGSGYLGQFLLSGSHFRGLHDVLSQVHYTYGSRQLASAPAGVVAHK--VDLSTG 58 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA---IAKAADSIGIP-- 94 + F ++N AA + E P+ A ++N + + A+ G+ Sbjct: 59 EGLTQAFEQTPFHAVVNCAAISQPALCETAPDTARAVNVPTHLVDCLLRQEAERGGLRAL 118 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE--KVASYTNNY--VILRTAWV 150 I+ISTD VFDG SR E N +N+YGKSK E+ V ++ + Y ILR++ + Sbjct: 119 LIHISTDQVFDG-SRAHWKEDEAGNQVNVYGKSKYEAEQHILVRTWGHPYPVAILRSSII 177 Query: 151 YSIFGSNFLLSMLRLAKER------REISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 Y + + L L + S D+ +P + R + + + Sbjct: 178 YGPPAPDPVPRPLFLQFASAVSNPDKPTSFFQDEHRSPVHVRDLQRLTELLIAAHGQQLE 237 Query: 205 TSLRGIF-------HMTADGG---PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 G H + G +S D A + + G + + + + Sbjct: 238 ALAPGALATVAARRHRVYNAGGPERLSRVDMARQV---ADCLGCGHGSIESVPSASVARG 294 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 P +D S+L + + + ++E +R+IL Sbjct: 295 VVSPPDISMDISRLQSDLGFKPAAFREAIRDIL 327 >gi|225556964|gb|EEH05251.1| NAD dependent epimerase/dehydratase [Ajellomyces capsulatus G186AR] Length = 329 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 115/326 (35%), Gaps = 47/326 (14%) Query: 4 LVIGNNGQIAQSLSSMCVQD---VEIIRVG------RPDID--LLKPKDFAS--FFLSFS 50 L+ G G + + + + +D + G R D+D ++K Sbjct: 6 LITGATGLLGRQVLNAFERDSTNWNVFGQGFSRAGTRTDMDSEIVKADLLDEGVMITGLK 65 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSR 109 P+V+++ AA DK + P+ A IN ++A+A S I IYISTDYVF G Sbjct: 66 PNVVVHCAANRFPDKCDQNPDAARKINVAATRSLARATSSRSILLIYISTDYVFPGRPGE 125 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFG-------SNFL 159 P + + T P NIYG++K GE V T V+LR +Y + + Sbjct: 126 APYEASAKTEPPNIYGETKRDGEVAVLEETRGCGLGVVLRVPVLYGPARQNSESAINTLV 185 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI-----ENSDTSLRG----- 209 ++ + + + PT + R IA + +D G Sbjct: 186 DAVWKAQDANAGVQMDDWAIRYPTHTADVGRVCRDIAARYLSLFVGAAADREDDGGFSFK 245 Query: 210 ----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 I +++ + + + G P + + P + RP + L Sbjct: 246 SLPRILQFSSEDAMTKY----QICQTLAEILGLPLPGMMPVKNGPKPGEVQRPYDTHLST 301 Query: 266 SKLANTHNIRIST-----WKEGVRNI 286 +L + W++ + Sbjct: 302 EELRRIGIDVQTQSFVAWWRKELHAF 327 >gi|222054555|ref|YP_002536917.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221563844|gb|ACM19816.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 294 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 114/312 (36%), Gaps = 56/312 (17%) Query: 1 MK--CLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD-----------------IDLLKP 39 MK L++G G + +L +D+E+ R +D P Sbjct: 1 MKQSVLILGATGMLGHTLLEQLAARKDLEVTATVRCQGSVEGITTKLLEKIVGNLDADNP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 PDV+IN + +P A +IN+ +A+A + G I+IS Sbjct: 61 DSVLKTLAQVKPDVVINCIGIIKQLPSAKDPITAITINSLFPHRLAQACKAAGSRLIHIS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 TD VF G E + ++YG++K GE + V LRT+ + + Sbjct: 121 TDCVFSGSKGN-YTESDVADATDLYGRTKFLGEVDY----PHCVTLRTSIIGHELKGCYS 175 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 L LA+E E++ + T +++AR I + L G++ ++++ P Sbjct: 176 LIDWFLAQEG-EVNGYTEAIYTGFPTVEMARIIADYVI-----PNPQLNGLYQVSSE--P 227 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-----SCLDCSKLANTHNI 274 +S + A++ ++ RP + LD S+ N Sbjct: 228 ISKYEL----LQLVAKQYNKDIQI-------------RPFHDFHCDRSLDSSRFRNITGY 270 Query: 275 RISTWKEGVRNI 286 +W E V + Sbjct: 271 TPPSWSEMVAAM 282 >gi|20094161|ref|NP_614008.1| nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] gi|19887177|gb|AAM01938.1| Nucleoside-diphosphate-sugar epimerase [Methanopyrus kandleri AV19] Length = 309 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 109/317 (34%), Gaps = 53/317 (16%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVG-------------RPDI-----DLLKPKDFA 43 LV G G I + V + +++ + R DI D+ P+ Sbjct: 2 ILVTGGAGFIGSHVVEELVDRGHDVVVLDNFSVGCEENLREVRDDIEIVRADVTDPRAVE 61 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIST-D 101 F + P+ +I+ AA V + + P + INA G + A +Y S+ Sbjct: 62 RTFREYRPEAVIHLAAQVNVRYSMESPFVDARINALGTLNLVSLAAEHDVERFVYASSGG 121 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSN 157 V+ P+DE PT P++ YG SKLAGE V Y YVILR A VY Sbjct: 122 AVYGEPEYLPVDEEHPTRPISNYGVSKLAGEYYVRVYAERDGFEYVILRYANVYGPRQDP 181 Query: 158 -----FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + L A +++ D Q +AR + G+ Sbjct: 182 RGEAGVIPIFLLRAARGEPLTIFGDGEQTRDFVFVEDVARVTAEAVER--------GDGV 233 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RPAYSCLDCSKLA 269 +++ G S D + A G VY + P R Y LD S+ Sbjct: 234 YNI-GTGRETSVNDIVNAVK---AVTGVDVEVVY-----EDPRPGEVRRIY--LDPSRAR 282 Query: 270 NTHNIRIS-TWKEGVRN 285 +EG+ Sbjct: 283 EELGFEPRVDLEEGIER 299 >gi|225387327|ref|ZP_03757091.1| hypothetical protein CLOSTASPAR_01080 [Clostridium asparagiforme DSM 15981] gi|225046576|gb|EEG56822.1| hypothetical protein CLOSTASPAR_01080 [Clostridium asparagiforme DSM 15981] Length = 355 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 25/237 (10%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQD-----------------VEIIRVGRPDIDLLKPKDF 42 MK L+ G G + L + + D+ Sbjct: 1 MKTILITGAGGFLGSRLVRRFSAGTSADPHFPQTEPFAVSPYRVYPLSGRAPDICDAAGL 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + F PD +I+ AA + + E EPE ++++N GA IA A + G I+ S+D Sbjct: 61 LALFCQVGPDYVIHCAAVSDTGRCEREPEFSYAVNVTGAENIAMACRASGAKLIFCSSDQ 120 Query: 103 VFDGLSRT----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF 158 V+ RT P E P +YG+ KL E++ A+ + V LR +W+Y Sbjct: 121 VYFDNVRTAFPVPRRESEKLYPSGVYGRQKLEAEKRCAAACPDTVSLRLSWMYDTGKPGP 180 Query: 159 LLSMLRLAKERREIS--VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + R + + P + + +A N+ D G+++ Sbjct: 181 EKHGNLVTTLRGLLDDPDPDARLVFPVHDRRSLTDVWDVAVNMEAALDL-TPGVYNF 236 >gi|149377610|ref|ZP_01895348.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter algicola DG893] gi|149358083|gb|EDM46567.1| dTDP-4-dehydrorhamnose reductase-like protein [Marinobacter algicola DG893] Length = 292 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 111/283 (39%), Gaps = 14/283 (4%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 M LV+ + G + + L + + + +++ + + D+I+N Sbjct: 1 MHVLVVHDYGPLGRVLLERLRNTSLHVSPLLISELETADLSALEGWVPDDT-DLIVNALW 59 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 + AE PE+A + A+A+ A I + +S+ YVFDG ++ +P Sbjct: 60 LADPESAEKNPELAHKASFSLPVALAEHACEHNIALLQLSSSYVFDGRKQSAYIASNPGQ 119 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P N G + E+ + + ++ILRT W F+ + +A E I + Sbjct: 120 PCNELGNWQWECEQALRTLLPRHIILRTGWSLG----RFVRKVQSVAAESDTIKLPGKCR 175 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 G P + +AR I I + + + G + +S + I + RG P Sbjct: 176 GQPVTVSDLARVITAIVQQI--DCGAEVWGTYQYAG-AEDISLYELGLAI---TGLRGIP 229 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 R+ + PA + + C+K+ NT ++ W+ G Sbjct: 230 DG--IRVVDETPAWATLEPANATMICTKIRNTFGVKQLPWRSG 270 >gi|227829531|ref|YP_002831310.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] gi|227455978|gb|ACP34665.1| dTDP-4-dehydrorhamnose reductase [Sulfolobus islandicus L.S.2.15] Length = 195 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 12/183 (6%) Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI 93 +DL F + PDVIIN A+ T VDK E E +AF +NAE I +A+ + Sbjct: 7 LDLTNYSAVEDFIIKKRPDVIINTASLTDVDKCEVERSLAFKVNAETVKHIVRASRVVEA 66 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 I+ISTDYVFDG E NP+N YG +KL GE SY ++ VI RT+ V+ Sbjct: 67 YLIHISTDYVFDGKKGL-YKEEDLPNPINYYGLTKLLGETYALSYDDSLVI-RTSGVF-- 122 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 F + + + KE +E+S + +P SA ++A AI ++ GI ++ Sbjct: 123 RHKGFPIYVYKTLKEGKEVSAFK-GYYSPISARKLAEAISELIEYRKT-------GILNI 174 Query: 214 TAD 216 ++ Sbjct: 175 ASE 177 >gi|294781731|ref|ZP_06747064.1| dTDP-4-dehydrorhamnose reductase (RfbD-2) [Fusobacterium sp. 1_1_41FAA] gi|294481841|gb|EFG29609.1| dTDP-4-dehydrorhamnose reductase (RfbD-2) [Fusobacterium sp. 1_1_41FAA] Length = 441 Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 118/320 (36%), Gaps = 51/320 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG----RPDI-------DLLKPKDFASFFLSFS 50 + L+ G NG I Q + V+D +II + + I D+ FL Sbjct: 142 RILITGINGFIGQYIGKELVKDFQIIGLDVVINKEKIWDKFYLGDIRDRNLLEEIFLQNK 201 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 D++I+ A A+ K E+ + + IN + + + + ++IS+D VFDG Sbjct: 202 IDIVIHLGAEKALIKCENNKKECYEINYQATMDLYRLSKKHQAKFLFISSDQVFDGKLGN 261 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-ILRTAWVYSIFGSNF----------- 158 E S +P+N YG+ KL E + + + I RTA + N Sbjct: 262 -YKEDSLCSPINYYGELKLKVENDLLKEKDKNITICRTALDFGKIPENQREIFDSVKKND 320 Query: 159 --------LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 + ++ K R +I + +++ +PTS I R I ++ + ++ GI Sbjct: 321 KLLVQGFIIDHIIYKLKSREKIILPQNEYMSPTSVELIYRQIKEVI-------NKNINGI 373 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 H G +S +F I + + + P RP L+ + Sbjct: 374 LHCCG-GERISRYEFGLKI---AKFYNLDSQYISPEDSND-PL---RPKDVSLNVEESQK 425 Query: 271 THNIRISTWKEGVRNILVNI 290 + + +L + Sbjct: 426 KLGFIF----DNIEEMLKKL 441 >gi|169616109|ref|XP_001801470.1| hypothetical protein SNOG_11227 [Phaeosphaeria nodorum SN15] gi|160703115|gb|EAT81726.2| hypothetical protein SNOG_11227 [Phaeosphaeria nodorum SN15] Length = 225 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 32/226 (14%) Query: 4 LVIGNNGQ--------IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVII 55 L+ G Q I LS ++ +D+L K+ +PDV++ Sbjct: 6 LITGGKRQFFLDGWKSIGTGLSR-------VVLPDVIKLDILDQKEVERVLDETAPDVVV 58 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDE 114 + AA D PE A IN + + A+A+A + GI IYISTDYVF G P + Sbjct: 59 HCAANRFPDSCTANPEAARKINVDSSRALAEATTARGIFLIYISTDYVFSGKRGEAPYEP 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVAS------YTNNYVILRTAWVYSIFGSN----------F 158 S NP N+YG++KL GE+ V N V+LR +Y Sbjct: 119 ESSPNPPNVYGQTKLDGEKAVLEVATQRGSQNKVVVLRVPVLYGSCDEPKESAVNVLMSQ 178 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 L + +L +R +I V PT+ + R I+ ++ ++ Sbjct: 179 LWASQKLEDDRTKIQVDDYALRFPTNTQDVGRVCRDISKLYLDPAN 224 >gi|115927421|ref|XP_799081.2| PREDICTED: similar to Methionine adenosyltransferase II, beta, partial [Strongylocentrotus purpuratus] Length = 222 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 15/228 (6%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ AA D E +P+ +N IA + +GI +YIST+YVFDG Sbjct: 1 PDVVIHAAAERRTDVVERDPQTVQKLNVGATAVIASVCEKLGILLVYISTNYVFDGTK-P 59 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-R 169 P NPLN YG+SK GE + VILR +Y + L + + Sbjct: 60 PYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYGSIERLNESAATYLLHQIQ 119 Query: 170 REISVVCD----QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + S V D Q PT +A ++Q+A + S GI H ++ Sbjct: 120 DDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGERVS--GILHW-NTSEQLTRYQM 176 Query: 226 AEYIFWESAE-RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 A I + + RP + +D S + + Sbjct: 177 ALIITDVFNLPQDHLIANPNPPSA-----GTPRPHNASMDISAVTDQG 219 >gi|115956281|ref|XP_001192506.1| PREDICTED: similar to Methionine adenosyltransferase II, beta [Strongylocentrotus purpuratus] Length = 231 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 88/228 (38%), Gaps = 15/228 (6%) Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ AA D E +P+ +N IA + +GI +YIST+YVFDG Sbjct: 10 PDVVIHAAAERRTDVVERDPQTVQKLNVGATAVIASVCEKLGILLVYISTNYVFDGTK-P 68 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE-R 169 P NPLN YG+SK GE + VILR +Y + L + + Sbjct: 69 PYKPSDAPNPLNKYGQSKRDGEIATLEHYPGAVILRLPLLYGSIERLNESAATYLLHQIQ 128 Query: 170 REISVVCD----QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + S V D Q PT +A ++Q+A + S GI H ++ Sbjct: 129 DDTSKVQDLCDYQQRRPTHVRDVASVLLQLAQRHCKGERVS--GILHW-NTSEQLTRYQM 185 Query: 226 AEYIFWESAE-RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 A I + + RP + +D S + + Sbjct: 186 ALIITDVFNLPQDHLIANPNPPSA-----GTPRPHNASMDISAVTDQG 228 >gi|312877141|ref|ZP_07737112.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] gi|311796115|gb|EFR12473.1| dTDP-4-dehydrorhamnose reductase [Caldicellulosiruptor lactoaceticus 6A] Length = 125 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 2/125 (1%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAA 59 MK L+ G GQ+ Q+ + +E I +D+ K F IIN AA Sbjct: 1 MKVLITGAAGQLGQAFQRFFTKKGIEYIAADHGMLDITNLKQLRKFVKGKDITHIINCAA 60 Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 Y AVDKAE++ + A+ +N G +A + I ++ STDYVFDG TP F + Sbjct: 61 YNAVDKAEEDWKTAYLVNGLGVRNLAIISLENKIELVHYSTDYVFDGKKSTPYTIFDTPS 120 Query: 120 PLNIY 124 L+IY Sbjct: 121 -LSIY 124 >gi|159125959|gb|EDP51075.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus A1163] Length = 304 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 105/297 (35%), Gaps = 31/297 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 L+ G G + + + + + R DL KP+D + + Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRATPPTILKADLEKPEDIKNLLDEAK--L 62 Query: 54 I-INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTP 111 + ++ AA + D + PE A +N + +A+ + +YISTDYVF G P Sbjct: 63 VPLHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKALLVYISTDYVFSGKEGEAP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF-------LLS 161 + + +P N YG+ K GE V T + ++LR +Y +N + + Sbjct: 123 YEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPLLYGTAQNNSESAVNILIDA 182 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGP 219 + + E + + PT+ +AR I ++ L + H +++ Sbjct: 183 IWKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYLKERPRIHELPKVLHFSSEDRM 242 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFT-KQYPTKAHRPAYSCLDCSKLANTHNIR 275 + E + G + + R RP + L K+ I Sbjct: 243 TK-YEMCE---KLAEVLGLSLAGMIRNKQGNDPNASVQRPYDTHLST-KVLKDLGID 294 >gi|70985224|ref|XP_748118.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus Af293] gi|66845746|gb|EAL86080.1| NAD dependent epimerase/dehydratase family protein [Aspergillus fumigatus Af293] Length = 304 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 104/294 (35%), Gaps = 30/294 (10%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII---RVGRPD------IDLLKPKDFASFFLSFSPDV 53 L+ G G + + + + + R DL KP+D + + Sbjct: 5 VLITGATGLLGRQVFNTFKHSGCFVVGQGYSRATPPTILKADLEKPEDIKNLLDEAK--L 62 Query: 54 I-INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTP 111 + ++ AA + D + PE A +N + +A+ + +YISTDYVF G P Sbjct: 63 VPLHCAANRSPDLCDKNPEQARRVNVDATRTLAEETSARKALLVYISTDYVFSGKEGEAP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---VILRTAWVYSIFGSNF-------LLS 161 + + +P N YG+ K GE V T + ++LR +Y +N + + Sbjct: 123 YEVDAEPSPTNYYGQLKRDGEIAVLEATKDTGLGIVLRVPLLYGTAQNNSESAVNILIDA 182 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT--SLRGIFHMTADGGP 219 + + E + + PT+ +AR I ++ L + H +++ Sbjct: 183 IWKAQDENAGVKMDDWAQRYPTNTEDVARVCRDIVIKYLKERPRIHELPKVLHFSSEDRM 242 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFT-KQYPTKAHRPAYSCLDCSKLANTH 272 + E + G + + R RP + L L + Sbjct: 243 TK-YEMCE---KLAEVLGLSLAGMIRNKQGNDPNASVQRPYDTHLSTKVLKDLG 292 >gi|242215185|ref|XP_002473410.1| predicted protein [Postia placenta Mad-698-R] gi|220727507|gb|EED81424.1| predicted protein [Postia placenta Mad-698-R] Length = 301 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 114/281 (40%), Gaps = 30/281 (10%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSPD 52 M+ + G +G + ++ + ++ + +DLL + F F PD Sbjct: 1 MRI-IRGASGVLGSAIYAGYKSAGHTVLGLAHSRPTDELRQLDLLDSAEVERVFSEFKPD 59 Query: 53 VIINPAAYTAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 +I+ AA D AE A + A +A+ + ++ +YISTDYVFDG S P Sbjct: 60 WVIHCAAERRPDVAEKVHTRKALWL-AFLPAHLAQISKALKFTLVYISTDYVFDGTS-PP 117 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVA-SYTNNYVILRTAWVYSIFGSNFLLSMLRLA---- 166 S TNP+N+YG++K GE V + VILR +Y N ++ L Sbjct: 118 YTPSSLTNPVNLYGRTKRDGELAVLGVSGSKTVILRVPVLYGPAPKNSDSAVNILLDVVT 177 Query: 167 -KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 + ++ + PT+ L IA +++++ S + I H + G P + + Sbjct: 178 DQSGKQYKMDHYATRYPTNVLDIADFLVRLSAL---PSSRPIPPILHYSG-GEPFTKYEM 233 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYP---TKAHRPAYSCL 263 +F + P+ + + + P RP L Sbjct: 234 -CLVF--ARILSLPHKHI--VADAEPPKGDAATTRPRDCQL 269 >gi|264680363|ref|YP_003280273.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] gi|262210879|gb|ACY34977.1| dTDP-4-dehydrorhamnose reductase [Comamonas testosteroni CNB-2] Length = 124 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 9/115 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI---------DLLKPKDFASFFLSFSP 51 MK L++G NGQ+ L E+I + R + D+ + A S P Sbjct: 1 MKLLLLGKNGQVGWELQRSLAPLGEVIALDRQSVNVDGNGLCGDIGDLQTLAQTIRSVRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 DVI+N AA+TAVDKAE EP++A +NAE +A A S+G ++ STDYVFDG Sbjct: 61 DVIVNAAAHTAVDKAESEPDLALRLNAEAPEVMALEAKSLGALLVHYSTDYVFDG 115 >gi|28896998|ref|NP_796603.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD 2210633] gi|153839167|ref|ZP_01991834.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ3810] gi|260362308|ref|ZP_05775275.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus K5030] gi|260897623|ref|ZP_05906119.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus Peru-466] gi|260899554|ref|ZP_05907949.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ4037] gi|28805206|dbj|BAC58487.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus RIMD 2210633] gi|149747339|gb|EDM58317.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ3810] gi|308087496|gb|EFO37191.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus Peru-466] gi|308108746|gb|EFO46286.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus AQ4037] gi|308111340|gb|EFO48880.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio parahaemolyticus K5030] Length = 290 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 112/297 (37%), Gaps = 22/297 (7%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVEIIRVG---RPDID--LLKPKDFASFFLSFSPDVI 54 MK L++G +G + + + ++ + + ID D + DV+ Sbjct: 1 MKNVLLLGESGFVGSVVYNSLHCVCKVYTIAPNKKITIDNVFEVANDVFKSIEINNIDVV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDE 114 IN A +D+ E+ +N I I ++IS++ V+DGL P E Sbjct: 61 INCIAMANLDQCENNKLDCELVNTTFVTHIVDYLKDKDIKLVHISSNAVYDGL-NAPYSE 119 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GSNFLLSMLRLAKERR 170 S P+N YG K + + S NNY I R VY N + +++ Sbjct: 120 NSLREPINYYGICKSNADYYIESNLNNYAIARPITVYGPRKIEQRDNPVSFIVKKILSGE 179 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 +V D ++ AI ++ S + L+G+++++ D D I Sbjct: 180 SFDLVDDNIVNMIHVEDLSNAIKKL-------SLSDLKGVYNLSGDVSEC-RYDLGIRI- 230 Query: 231 WESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 + G +K+ ++ + A RP + D K+ + NI + IL Sbjct: 231 --AKIMGSDLNKINKVSGSNFKMAAKRPYNTSFDNKKMKSVLNIEPKNIDIAISEIL 285 >gi|159898981|ref|YP_001545228.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] gi|159892020|gb|ABX05100.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus ATCC 23779] Length = 286 Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 59/291 (20%), Positives = 111/291 (38%), Gaps = 28/291 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------------IDLLKPKDFASFFLSF 49 + L+ G +G + Q ++ Q +V DL + Sbjct: 3 RLLITGASGYLGQRVAYFAQQTTIWDKVYSQTWRNPPTAGEHVACDLADQAQLEALLEQI 62 Query: 50 SPDVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P II+ AA T A+ A + + +++N + + +A+ A + +++S+D V+ G Sbjct: 63 QPTAIIHTAAVTPAMGPAMTDQAL-WAVNVQASATLARWAAQHQVRLVHVSSDAVWGGRE 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-SNFLLSMLRLAK 167 E P++ YG SK AGE VA+ I RT+ +Y L + + Sbjct: 122 AA-YTESDVPAPIHPYGASKAAGEAVVAALDPQAAIARTSLLYGQNPLDPNTTMALAMLR 180 Query: 168 ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 R + D+ P +A+A+I++A SL GIFH+ +S + + Sbjct: 181 GERHGVLFTDELRCPVFVEDVAQALIELAQK------PSLYGIFHLVGPQ-ILSRFELGQ 233 Query: 228 YIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 + A G + + T RP+ +D + + + + Sbjct: 234 ALL---AWNGIDSTGLPAGTTTASGL--RRPSRVVVDNRTTQSQLSTILRS 279 >gi|295099497|emb|CBK88586.1| dTDP-4-dehydrorhamnose reductase [Eubacterium cylindroides T2-87] Length = 260 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 36/275 (13%) Query: 30 GRPDIDLLKPKDFASFFLSFSPDVIINPAAY--TAVDKAEDEPEIAFSINAEGAGAIAKA 87 R D DL KP++ +F D+ + AA TAV E+ PE+A IN E I +A Sbjct: 2 TRKDADLSKPEEVEAFLKDKQFDICFHTAANATTAV--CEENPELAHKINVESTQKIIEA 59 Query: 88 ADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR 146 I+ ST+ VF+G P +E + + +YGK+K+ E+ + ++Y+ILR Sbjct: 60 CKKNQARLIFCSTEQVFNGKENHGPFNEEESVSAVTVYGKNKIECEDLIHEQLDDYLILR 119 Query: 147 TAWVYSIFGSNF------LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLI 200 +W+ + + +++ + C++ T A ++A+ +I Sbjct: 120 FSWMMGLSFDKVKASPSIIKNVMNALLHQTPTLFTCNERRCMTYAKKLAQQFEKITAL-- 177 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 G +H+ + + + A YI E +K Y Y Sbjct: 178 ------DTGTYHVASKNEMTT-YETAVYIAKELKASDEAIAK--------YILPNKE-RY 221 Query: 261 S------CLDCSKLANTHNIRISTWKEGVRNILVN 289 S LD SKL N I T++E + IL + Sbjct: 222 SERFRDYRLDSSKLEN-LGITFGTFEENIEEILKD 255 >gi|332204385|gb|EGJ18450.1| rmlD substrate binding domain protein [Streptococcus pneumoniae GA47901] Length = 151 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 14/161 (8%) Query: 130 AGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIA 189 GEE V + +N+ I+RTAWV+ +G NF+ +M LAK + ++VV DQ+G PT +A Sbjct: 1 MGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQYGRPTWTRTLA 60 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRIFT 248 +I +A N E G +H++ D +W DFA I ++ +V + + Sbjct: 61 EFMIYLAENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT------DVEVKPVDS 108 Query: 249 KQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 Q+P KA RP S + +K T I TW++ ++ Sbjct: 109 SQFPAKAQRPLNSTMSLAKAKAT-GFVIPTWQDALQEFYKQ 148 >gi|329939350|ref|ZP_08288686.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseoaurantiacus M045] gi|329301579|gb|EGG45473.1| putative dTDP-4-dehydrorhamnose reductase [Streptomyces griseoaurantiacus M045] Length = 296 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 23/265 (8%) Query: 19 MCVQDVEIIRVGRP-------DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 E++ R +D + + FF + PDV ++ A V E +P+ Sbjct: 21 ALRARHEVVGWSRSRPAPDLYSVDATRSTEVDRFFDAHRPDVCVHCVAAPDVAACERDPD 80 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAG 131 +A ++N +A+A + +Y+ST++VFDG S T E +PL +YG++KL G Sbjct: 81 MAHALNVRTTENVARACARQAVRLVYLSTEFVFDGKSETGYAEDDVPHPLQMYGRTKLLG 140 Query: 132 EEKVASYTNNYVILRTAWVYSI----FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQ 187 EE+ AS ++I+R +Y G ++ ML E R + + PT Sbjct: 141 EER-ASEVPEHLIVRLPVLYGAPVPGRGRGWIERMLLALSEGRTVELDDRVERQPTWTED 199 Query: 188 IARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIF 247 +A + + G+ H + A + G P + + Sbjct: 200 VAAVLEEAVARR-------ETGVLHAASRERLTKLAW----GRKLAEAAGLPGTLLRPAR 248 Query: 248 TKQYPTKAHRPAYSCLDCSKLANTH 272 + RPA L +L Sbjct: 249 AVPEGQEVPRPARPWLLTDRLEQRG 273 >gi|289678442|ref|ZP_06499332.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas syringae pv. syringae FF5] Length = 161 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 6/160 (3%) Query: 136 ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 + +ILRT+WVY+ G+NF +MLRLA ER ++VV DQ+G PT A IA QI Sbjct: 1 QASGAKALILRTSWVYAARGNNFAKTMLRLATERDSLNVVADQYGAPTGAELIADVTAQI 60 Query: 196 AHNLIENSDTSL-RGIFHMTADGGPVSWADFAEYIFWESAERG----GPYSKVYRIFTKQ 250 H + + + + GI+H+ A G SW FA+++ +A G ++ I T+ Sbjct: 61 LHRVRADQNPAALAGIYHLAA-AGETSWHGFAQFVLEHAALNGVALKVAPDQIGAIPTEA 119 Query: 251 YPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 YP A RP S L +KL +++ +W++G + +L I Sbjct: 120 YPVPAPRPRNSRLALAKLETAFQLKMPSWQQGAQRMLDEI 159 >gi|152980065|ref|YP_001353949.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] gi|151280142|gb|ABR88552.1| dTDP-4-dehydrorhamnose reductase [Janthinobacterium sp. Marseille] Length = 284 Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 114/311 (36%), Gaps = 56/311 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 M+ LV+G +G + ++ + + E+ R P D+ Sbjct: 1 MRILVLGASGMLGSAMMRVLNEKDVGEVFGTVRSANVARFFTPQIAQRLVPGCDVENQDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAE-DEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 F PDV+IN AE D+P +A IN+ +A G I+IST Sbjct: 61 LNKVFAEIKPDVVINCIGLIK-QLAEADDPLVALPINSLLPHRLAALCKLGGARLIHIST 119 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VFDG +R E +N ++YGKSK GE Y + + LRT+ + + S L Sbjct: 120 DCVFDG-ARGGYLESDVSNATDLYGKSKYLGE----VYFPHTITLRTSIIGAELQSAHGL 174 Query: 161 SMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 LA+ + + F + PT + QI ++I L G++H+ A Sbjct: 175 IEWFLAQ-KERCNGYSKAFFSGLPTVV------LAQIVRDIII-PRPELSGLYHVAAQS- 225 Query: 219 PVSWAD---FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 +S D ++ + + V L+ KL Sbjct: 226 -ISKLDLLSLVAEVYGKEIDIVPDDRLVI---------------DRSLNADKLRAETGYV 269 Query: 276 ISTWKEGVRNI 286 W+E V+ + Sbjct: 270 APDWRELVQTM 280 >gi|297529688|ref|YP_003670963.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] gi|297252940|gb|ADI26386.1| UDP-glucose 4-epimerase [Geobacillus sp. C56-T3] Length = 328 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 103/317 (32%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ + + ++ V PD D+ + F Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGERVVVVDNLQTGHREAVHPDAVFCQGDIRDREFLREVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + +I+ AA + V ++ +EP + N G + + G+ ++ ST V+ Sbjct: 62 RQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-------YSIFGSNF 158 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGED 181 Query: 159 LLSMLRL--------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L +R EISV D + TP L + A L Sbjct: 182 HNPETHLIPLILKVPLGQREEISVFGDDYDTPDGTCIRDYIHVLDLVDAHWLALEKLRSG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 +D+ ++++ G + + + + G + I + A RP + Sbjct: 242 ADSD---VYNLGNGNGFS-----VKEVIEAARQVTG-----HPIPAR---VVARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 RLVASSEKAKRELGWEP 302 >gi|291296405|ref|YP_003507803.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] gi|290471364|gb|ADD28783.1| dTDP-4-dehydrorhamnose reductase [Meiothermus ruber DSM 1279] Length = 247 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 100/279 (35%), Gaps = 57/279 (20%) Query: 12 IAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPE 71 + +L + E+I R ++D+ P F + P V+++ AAYT V AE E Sbjct: 18 LGTALRELLP---ELIAPSRAELDITDPSSVERAFAKYQPKVVVHAAAYTNVAGAEIEKA 74 Query: 72 IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPL-NIYGKSKLA 130 + + +N EG + +AA + ++ISTDYVF G E P P+ N Y SKL Sbjct: 75 LCWRVNVEGTRNLVRAALGHDLHFVHISTDYVFWGDVGG-YREEDPVGPVRNYYALSKLV 133 Query: 131 GEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIAR 190 EE V + ++I+RT++ S + + D + + Sbjct: 134 AEELVR-LLSRHLIIRTSFRPSPWPYP---------------TAYTDLYTS----QDYLE 173 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 I ++N H+ + + A + T+ Sbjct: 174 VIAPQIALALQNLHRIPYATLHIATERKSA--YELA-------------------LRTRP 212 Query: 251 YPTKAHR-------PAYSCLDCSKLANTHNIRISTWKEG 282 A R P LD S+ + +S+W Sbjct: 213 AVEPARRQEALVALPEDVSLDISRWRSL----LSSWDSA 247 >gi|254478563|ref|ZP_05091937.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] gi|214035492|gb|EEB76192.1| NAD dependent epimerase/dehydratase family protein [Carboxydibrachium pacificum DSM 12653] Length = 311 Score = 147 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 113/323 (34%), Gaps = 61/323 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 MK LV G G I ++ + + + V+ + G+ + D+ D Sbjct: 1 MKVLVTGGAGFIGSNIVDLLIGNGHGVVIVDNLSTGKEEFINKKAIFYKKDIAD-DDLYE 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F PD +I+ AA V K+ + P +N G + + G +Y S+ V Sbjct: 60 IFEKEEPDYVIHQAAQIDVQKSVNNPAFDAKVNILGTVNLLECCRKSGVKKIVYASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + PIDE NP++ YG SK E Y+ Y ILR A VY I Sbjct: 120 YGNPEYLPIDEVHKINPISYYGISKHTAEHYFEVYSQLYGLKYTILRYANVYGIRQDPKG 179 Query: 158 -------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 F+ ML+ ER I Q +A+A + + Sbjct: 180 EGGVISIFIDKMLK--GERPIIFGDGKQTRDFVYVKDVAKANLLALKR-------GDNEV 230 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA-----YSCLDC 265 +++ + P S + I + + + I+T+ P +S LD Sbjct: 231 VNISTNK-PTSINEL-VEIMNKIM-----NTSLKPIYTE--------PRKGDIIHSYLDN 275 Query: 266 SKLANTHNIRI-STWKEGVRNIL 287 K + + ++G+R + Sbjct: 276 KKALEVLGWKPEYSLEDGLRETI 298 >gi|56420684|ref|YP_148002.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] gi|56380526|dbj|BAD76434.1| UDP-glucose 4-epimerase [Geobacillus kaustophilus HTA426] Length = 328 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 101/317 (31%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ + + ++ V PD D+ F Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGERVVVVDNLQTGHREAVHPDAVFCQGDIRDRDFLREVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + +I+ AA + V ++ +EP + N G + + G+ ++ ST V+ Sbjct: 62 RQHDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-------YSIFGSNF 158 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGED 181 Query: 159 LLSMLRL--------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L +R EI + D + TP L + A L Sbjct: 182 HNPETHLIPLILKVPLGQREEIYIFGDDYDTPDGTCIRDYIHVLDLVDAHWLALEKLRSG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 +D+ ++++ G + + + + G + I + A RP + Sbjct: 242 ADSD---VYNLGNGNGFS-----VKEVIEAARQVTG-----HPIPAR---VVARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 RLVASSEKAKRELGWEP 302 >gi|14520521|ref|NP_125996.1| UDP-glucose 4-epimerase [Pyrococcus abyssi GE5] gi|5457737|emb|CAB49227.1| galE-1 UDP-glucose 4-epimerase) [Pyrococcus abyssi GE5] Length = 307 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 107/314 (34%), Gaps = 51/314 (16%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEIIRVG---------------RPDIDLLKPKDF 42 M+ +V G G I ++ ++ +++ + + D+ + Sbjct: 1 MRNKLIVVTGGAGFIGSHIAEALKEENDVVVIDNLYSGKPENVPEGVKFIEADVRDYESI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A S D + + AA +V+++ +P +N G I +A I+ S+ Sbjct: 61 AEIVSSA--DYVFHEAAQISVEESVKDPVFTEEVNVIGTINILRALSEGNGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 V+ + PI E P NP++ YG SK++GE + Y VILR VY S+ Sbjct: 119 VYGEPTSLPIREDHPLNPISPYGVSKVSGEHYCKVFYQLYGVPTVILRYFNVYGPRQSSA 178 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + A + + D Q + A I +A +T G Sbjct: 179 YAGVISIFMERALRGEPLVIFGDGKQSRDFVYVKDVVEANILVAEKRRAEGETFNVGT-- 236 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 G + + A I S+ + Q RP S D K+ Sbjct: 237 ----GRETTIIELAMKIIELSS------------TSSQILFSKPRPGDIRRSVADIEKIK 280 Query: 270 NTHNIRISTWKEGV 283 + +EG+ Sbjct: 281 KLGFKPRYSLEEGL 294 >gi|146281201|ref|YP_001171354.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas stutzeri A1501] gi|145569406|gb|ABP78512.1| dTDP-4-rhamnose reductase-related protein [Pseudomonas stutzeri A1501] Length = 212 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 4/207 (1%) Query: 82 GAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 +A+ + S+ VFDG T E PL+ G++ E+ V + Sbjct: 2 ERLAELCQHHDFVLLQPSSYRVFDGARTTAYSEKDEVAPLDARGQALWRIEQSVRALCPR 61 Query: 142 YVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 +V+LR W+ L +L+ ++ I + D+ G PT AR I+ + L Sbjct: 62 HVLLRFGWLLDDSRDGVLGRVLQRLEQSEAILLADDRRGNPTPVDDAARVILAVLKQL-- 119 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE-RGGPYSKVYRIFTKQYPTKAHRPAY 260 + L G +H A+ + E+A+ R +K+ + A P + Sbjct: 120 DCQAPLWGTYHYGGHEASTPLL-VAQALLGEAAKYRDVTTAKLTPVAHADCSDAAAEPQH 178 Query: 261 SCLDCSKLANTHNIRISTWKEGVRNIL 287 L C K+ T I+ W+ G+ ++L Sbjct: 179 GVLACKKIFTTFGIKPRAWRTGLPSLL 205 >gi|302342459|ref|YP_003806988.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] gi|301639072|gb|ADK84394.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM 2075] Length = 282 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 63/293 (21%), Positives = 112/293 (38%), Gaps = 22/293 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRPDIDLLKPKDFASFFLSFSPDVI 54 M+ L+ G G + L Q +DL K P+V+ Sbjct: 1 MRVLITGATGLLGGRLLPAWRQSGMDVVAVGHAAAADAAVDLTDQKATWRLLEERRPEVV 60 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIA-KAADSIGIPCIYISTDYVFDGLSRTPID 113 +N A + VD E +P+ A+ +N A +A A G ++ISTD+V+DG Sbjct: 61 VNLVALSNVDACEQDPQRAYLLNVRTAQNLAGWLAKRPGAALVHISTDHVYDGPGA--HA 118 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILR-TAWVYSIFGSNFLLSMLRLAKERREI 172 E T LNIY SK A E V + + + + +F ++++ + + Sbjct: 119 EPDVTL-LNIYAYSKFAAELAVLAVGGTALRVNFFGRSLTAGRMSFSDAIIQGLSAGQPM 177 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 D F +P S +A I ++ + G+F++ A G +S DFA + Sbjct: 178 GFFTDVFFSPLSLDTLAAMIARVVAD-------PAPGVFNLGAASG-LSKRDFAWRV--- 226 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + G + I Q +A RP + K + + + + + + + Sbjct: 227 AQRMGLTLAGAREITLAQAGLRARRPTGMVMAVGKFEKRYGVTLPSLEAEIES 279 >gi|14591500|ref|NP_143580.1| UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] gi|3258173|dbj|BAA30856.1| 306aa long hypothetical UDP-glucose 4-epimerase [Pyrococcus horikoshii OT3] Length = 306 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 111/319 (34%), Gaps = 51/319 (15%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDF 42 MK ++ G G I L+ + ++I GR + D+ + Sbjct: 1 MKNKLIVITGGAGFIGSHLAEALKDENDVIIIDNLYSGRIENIPEGVKFIRADVRDYESI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V ++ ++P +N G + +A I+ S+ Sbjct: 61 AEVISEA--DYVFHEAAQISVKESIEDPVFTEEVNVIGTINVLRALSQGDGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 V+ PI E + TNP++ YG +KLA E Y + Y VILR VY S+ Sbjct: 119 VYGEPKELPITEDTLTNPISPYGITKLAAEHYCRVYQSLYGIPVVILRYFNVYGPRQSSA 178 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + L A + + + D Q + A I +A N IF+ Sbjct: 179 YAGVISIFLERAIKGEPLIIFGDGKQTRDFIYVKDVVEANILVAKKRSANGR-----IFN 233 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT- 271 + A G + + A I ++ YP RP +K+ Sbjct: 234 V-ATGKETTILELAMKIIDMTSSSSSILF---------YP---PRPGDIRRSVAKIERIK 280 Query: 272 -HNIRIS-TWKEGVRNILV 288 + + +EG++ Sbjct: 281 KLGFKPRYSLEEGLKETFK 299 >gi|319789632|ref|YP_004151265.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] gi|317114134|gb|ADU96624.1| UDP-glucose 4-epimerase [Thermovibrio ammonificans HB-1] Length = 324 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 64/323 (19%), Positives = 109/323 (33%), Gaps = 67/323 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIR----VGR-----------PDIDLLKPKDFASF 45 M+ LV G G I + + I+ + R ++DL + + Sbjct: 1 MRILVTGGAGYIGSHTVELLGRKGHIVLTVDNLSRGHREAVLFGELAEVDLSEKEKLKEL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 SF PD +I+ AA+ V ++ +P+ + N A + +A G+ I+ ST V+ Sbjct: 61 INSFRPDAVIHFAAFIEVGESVKDPKSFYRNNTCNALNLLEAVVESGVKNFIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------S 152 + PI E P NP+N YG SKLA E + + Y + A Y Sbjct: 121 GNPQKVPIPEEHPKNPINPYGASKLAVERMLQDFHTAYGLNYVALRYFNAAGADPKGRIG 180 Query: 153 IFGS---NFLLSMLRLAK-ERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + + + +L+ AK ER + + TP +A A ++ L Sbjct: 181 ESHNPETHLIPLILKAAKGERDSFKIFGTDYPTPDGTCIRDFIHVCDLAEAHLKALEYLA 240 Query: 201 ENSDT----SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 E ++ G H + + + G KV Sbjct: 241 EGGESCALNCGYGTGHSV------------KEVVETAKRVTGREFKVEEAP--------R 280 Query: 257 RPAYS---CLDCSKLANTHNIRI 276 RP D ++ N + Sbjct: 281 RPGDPPILVADTRRIEEKLNWKP 303 >gi|147839168|emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera] Length = 368 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 125/366 (34%), Gaps = 88/366 (24%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-------------------DVEIIRVGRP-DIDLLKPKD 41 + LV+G G + Q L + V I R ++L + Sbjct: 5 RVLVVGGTGYLGQHLLQGFSEIQGHPFDLAFTHHSTPPQPLVHAIPHSRAFHVNLQSGEG 64 Query: 42 FASFFLSF--------------------------SPDVIINPAAYTAVDKAEDEPEIAFS 75 F + SF P V++N AA + E +P A S Sbjct: 65 FEAISRSFGQCEEKRYISSFRMFRLVAVKIWGNGKPHVVVNCAAISVPRSCEMDPAAAMS 124 Query: 76 INAEGAGAIAKAA---DSIGIPCIYISTDY-------------------------VFDGL 107 IN ++ K + I++STD V++G+ Sbjct: 125 INV--PSSLVKWLLSFEESNTLLIHLSTDQGLINPTETFMREFWIQIDTDMADHPVYEGV 182 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF------GSNFLLS 161 + E T P+N+YGKSK+A E+ +++ +NY ILR++ + S + Sbjct: 183 K-SFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGPQAISPVPKSLPIQW 241 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 + + ++ D+F P + I+ + I ++ + VS Sbjct: 242 IDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWI--AEGKQMKLILNAGGPDRVS 299 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 A AE + + RG S + + P +D ++L T +I ++ + Sbjct: 300 RAQIAETV---ADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLRV 356 Query: 282 GVRNIL 287 G++ L Sbjct: 357 GIQLTL 362 >gi|295100776|emb|CBK98321.1| dTDP-4-dehydrorhamnose reductase [Faecalibacterium prausnitzii L2-6] Length = 281 Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 15/222 (6%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 + LV G G + + M + + F L PDVI++ AA + Sbjct: 3 RVLVTGAGGFVGARILDMWRGQFALCAFPSDTLRTADESAVLRFILKEHPDVIVHTAALS 62 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNP 120 + EPE +F N +AK A+ +G + S+D V+ G R + E P +P Sbjct: 63 NTQYCQQEPEDSFRANVLLPEWVAKGAEEVGAKLLSCSSDQVYAGVTQRGALAETLPLSP 122 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREISV 174 N+YG+ KL E +V + + V LR W+Y + N L++LR AK + Sbjct: 123 SNVYGQHKLEAEARVLARCPDAVALRLPWMYDLPGYHLPIRGNLPLNILRAAKTGEVLRF 182 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + + ++ NL+ + G+++ ++ Sbjct: 183 SRNDYR-------GVGYVREVIENLVPAMELPG-GVYNFGSE 216 >gi|221039802|dbj|BAH11664.1| unnamed protein product [Homo sapiens] Length = 228 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 12/199 (6%) Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS 152 + IYIS+DYVFDG P E PLN+YGK+KL GE+ V +LR +Y Sbjct: 23 MQFIYISSDYVFDGT-NPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYG 81 Query: 153 ----IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + S + ++ + ++ Q PT +A Q+A + D S++ Sbjct: 82 EVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM--LDPSIK 139 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G FH + + + A I + P S + I T A RP + LDCSKL Sbjct: 140 GTFHWSGNEQMTK-YEMACAI---ADAFNLPSSHLRPI-TDSPVLGAQRPRNAQLDCSKL 194 Query: 269 ANTHNIRISTWKEGVRNIL 287 + + ++ G++ L Sbjct: 195 ETLGIGQRTPFRIGIKESL 213 >gi|118486138|gb|ABK94912.1| unknown [Populus trichocarpa] Length = 300 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 119/312 (38%), Gaps = 53/312 (16%) Query: 2 KCLVIGNNGQIAQSL----------------------SSMCVQDVEIIRVGRP-DIDLLK 38 + LV+G G + Q + S++ ++ I +DL Sbjct: 5 RVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAFHVDLTT 64 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPCIY 97 F S F +P+ A SIN + + + I+ Sbjct: 65 GDGFQSIASKFG-----------------QDPDAAMSINVPCSLVNWLSSFEERDTLLIH 107 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----- 152 +STD V++G+ + E T P+N+YGKSK+A E+ ++ NY ILR++ ++ Sbjct: 108 LSTDQVYEGVK-SFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIFGPQTIS 166 Query: 153 -IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + S + + + ++ ++ D+F P + I+ + + I + + Sbjct: 167 PVQKSLPIQWIDGVLSKKEQVEFFHDEFRCPVYVKDVVTIILSLINKWI--IEGKQMKLL 224 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 VS AE + + RG S + ++ PA +D SKL T Sbjct: 225 LNVGGPDRVSRVQMAETV---AHVRGYNTSLIKQVSASSVYRGVSSPADISMDISKLIQT 281 Query: 272 HNIRISTWKEGV 283 +I +++++GV Sbjct: 282 VSISPTSFRDGV 293 >gi|224034499|gb|ACN36325.1| unknown [Zea mays] Length = 247 Score = 145 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 32/234 (13%) Query: 2 KCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDI-----------------DLLKPKDF 42 + LV+G +G + Q L + V +++ DL F Sbjct: 9 RVLVVGGSGYLGQHLLAASSTVDRLDVAFTHHSPAPPQPLLETLPSVRAFRADLRSGDGF 68 Query: 43 ASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP---CIYI 98 + SF P V++N AA + E +P A + N ++ S G I + Sbjct: 69 EAISASFGQPHVVVNCAAMSVPRACELDPPAAMATNV--PSSLVNWLLSFGNEDSLLIQL 126 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------ 152 STD V++G+ + E T P+N+YGKSK+A E+ + +NY ILR++ +Y Sbjct: 127 STDQVYEGVK-SFYKEEDETMPVNMYGKSKVAAEKLIVEKCSNYAILRSSIIYGPQTISP 185 Query: 153 IFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 + S + M + + +++ D+F P + I+ + + Sbjct: 186 VAKSLPIQWMDGVLSQGQQVEFFSDEFRCPVYVKDMVDVILSLTKTWFPAHASD 239 >gi|225376376|ref|ZP_03753597.1| hypothetical protein ROSEINA2194_02017 [Roseburia inulinivorans DSM 16841] gi|225211752|gb|EEG94106.1| hypothetical protein ROSEINA2194_02017 [Roseburia inulinivorans DSM 16841] Length = 261 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 101/288 (35%), Gaps = 34/288 (11%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK L+ G G + L + P I + + DVII+ AA Sbjct: 1 MKILITGARGFVGARLMKELEG-----AIAAPSIQGMNEEQIKRIVEESEADVIIHTAAI 55 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPIDEFSPTN 119 + V E PE ++ N +A ++D G I S+D V+ G E Sbjct: 56 SDVGTCEKTPEASYHANVLLPVYLANSSD--GRKLICFSSDQVYRGCESDGQYRE-DEAK 112 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P NIYG KL E++V + V+LR W+Y + S +L + ++ Q+ Sbjct: 113 PANIYGAHKLEMEQRVLDRQPDSVMLRAEWMYD-YISPRGNYLLNVLNAEETLT-FGKQY 170 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 T ++ + ++ GI++ ++ S + + + G Sbjct: 171 RGITYLREVCENMERVIKL--------PGGIYNFGSETTQ-SMYEITKEFLRIT----GS 217 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNIL 287 +V +DC K A + S +G++ L Sbjct: 218 RQQVQEGSAV---------HNLWMDCGKAAEH-GVVFSGVMDGLKRCL 255 >gi|222099007|ref|YP_002533575.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] gi|221571397|gb|ACM22209.1| dTDP-glucose 4,6-dehydratase [Thermotoga neapolitana DSM 4359] Length = 342 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 115/329 (34%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVG----------------RPDI-----DL 36 MK LV G G I + ++ D II + R + D+ Sbjct: 1 MKILVTGGAGFIGSNFIHYMMEKHPDYRIICLDKLTYAGNLRNLESALNRENFRFIKGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + F PD+++N AA + VD++ ++PEI N G + A GI Sbjct: 61 CDRELVYKVFEEERPDIVVNFAAESHVDRSIEDPEIFLKTNIIGTQVLMDACRKYGIKRF 120 Query: 97 Y-ISTDYVFD----GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 + +STD V+ E SP P + Y SK + + V +Y Y I R Sbjct: 121 HQVSTDEVYGDLPLDRPDLKFTEKSPLKPSSPYSASKASADLLVMAYHRTYELPVTISRC 180 Query: 148 AWVYSIFG--SNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS 203 + Y + + M+ A R + V D AI I H E Sbjct: 181 SNNYGPYQFPEKLIPLMIINAIHDRPLPVYGDGRNVRDWIHVKDHCEAIDLIIHEGKEGE 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC- 262 I+++ + + + + I E G P S + + RP + Sbjct: 241 ------IYNIGGENERSNI-EVVKMILKE---LGKPESLIKFVKD--------RPGHDRR 282 Query: 263 --LDCSKLANTHNIRIS-TWKEGVRNILV 288 LD +K+ +++EG+R+ + Sbjct: 283 YALDITKMKEEFGWSPKISFEEGLRSTIK 311 >gi|88798950|ref|ZP_01114532.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] gi|88778430|gb|EAR09623.1| dTDP-4-dehydrorhamnose reductase [Reinekea sp. MED297] Length = 302 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 121/304 (39%), Gaps = 38/304 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPD-VIINPAAYTA 62 L++G +GQ+ +L++ EI D L P+ + + + + + N Sbjct: 11 LILGADGQVGAALTAYLDSR-EIPYRAIATADALDPEKLRTILAAPANERFVANLL---- 65 Query: 63 VDKAEDEPEIA-------FSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSRTPIDE 114 +EPE + A IA+ + +S+ VF G S E Sbjct: 66 ----FEEPEHFSQSIDDTWQA---AAALIAEDCGKDDDRQLLQLSSGRVFSGFSARGYHE 118 Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISV 174 + ++ G+S + E++ + + V+LR W++S +NFL ++ A + E+ + Sbjct: 119 SDEPDAVSEVGQSFIRLEQQTMARCPDAVLLRVDWLFSESRNNFLNRLVDAAIHKEELCI 178 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 G PT A +AR ++ ++ + S L G++H AD S FA+ + + Sbjct: 179 STSMRGCPTDAHTVARVLVAMSEQIDCGVSKPDLSGVYHY-ADSDACSLYTFAKTVI--T 235 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPA--------YSCLDCSKLANTHNIRISTWKEGVRN 285 + +V I RP L+C K+ +T I+ W+ ++ Sbjct: 236 VVKSMSEVRVETIGEVD-----TRPLVDGERQSENHELNCRKILSTFGIKQRPWRRSLQE 290 Query: 286 ILVN 289 +L + Sbjct: 291 VLKH 294 >gi|55379798|ref|YP_137648.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] gi|55232523|gb|AAV47942.1| UDP-glucose 4-epimerase [Haloarcula marismortui ATCC 43049] Length = 331 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 37/275 (13%) Query: 3 CLVIGNNGQIAQ----SLSSMCVQDVEIIR--------------VGRPDIDLLKPKDFAS 44 + G G I L D EI V +D+ + Sbjct: 13 IAITGGAGYIGSRVIYELQ-QAHPDWEITAIDNFYLGTVQSVGDVDIEHVDIRNRDRLEA 71 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 DV+++ AA + VD E++ ++A+ +N +G +A G I+ + V Sbjct: 72 ALDGA--DVVMHLAAVSGVDDCEEKQDLAYEVNVQGTDNVAWFCRKTGAALIFPFSMAVI 129 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN------- 157 PI P +PLN YG++KL E V +Y + + +++GS+ Sbjct: 130 GDPQEFPITVDHPRDPLNWYGRTKLLNERDVETYADGAFPAHQFMISNLYGSHEIDGQTV 189 Query: 158 ----FLLSMLRLAKERREISVVC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI- 210 + + A ++V Q +ARA + L+E D G+ Sbjct: 190 SKGTVINFFVNRALAGETLTVYEPGTQSRNFIHVKDVARAYVDSCERLLEQLDRGETGVE 249 Query: 211 -FHMTADGGPVSWADFAEYIFWESAERGGPYSKVY 244 + + +D P S A+ + +A+ + V Sbjct: 250 KYEIASDEDP-SVHTVAKLVRDIAADIADIDADVE 283 >gi|196248608|ref|ZP_03147308.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] gi|196211484|gb|EDY06243.1| UDP-glucose 4-epimerase [Geobacillus sp. G11MC16] Length = 328 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 105/317 (33%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFASFF 46 L+ G G I ++ + + E+I V PD D+ + F Sbjct: 2 ILICGGAGYIGSHAVYRLLEKGEEVIVVDNLQTGHREAVHPDARFCQGDIRDRDFLRTVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + + +I+ AA + V ++ +EP + N G + + + ++ ST V+ Sbjct: 62 QQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMKEFDVRQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-------YSIFGSNF 158 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGED 181 Query: 159 LLSMLRL--------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L +R EI + D + TP L + A + + L Sbjct: 182 HNPETHLIPLILKVPLGQREEIFIFGDDYDTPDGTCIRDYIHVLDLVDAHVLALNKLRNG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 +D+ ++++ G + + + + G + I + A RP + Sbjct: 242 ADSD---VYNLGNGNGFS-----VKEVIEAARQVTG-----HPIPARVM---ARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 KLVASSDKAKRELGWEP 302 >gi|138895729|ref|YP_001126182.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] gi|134267242|gb|ABO67437.1| UDP-glucose 4-epimerase [Geobacillus thermodenitrificans NG80-2] Length = 328 Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 105/317 (33%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFASFF 46 L+ G G I ++ + + E+I V PD D+ + F Sbjct: 2 ILICGGAGYIGSHAVYRLLEKGEEVIVVDNLQTGHREAVHPDARFCQGDIRDRDFLRTVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + + +I+ AA + V ++ +EP + N G + + + ++ ST V+ Sbjct: 62 QQYDIEAVIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMKEFDVRQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-------YSIFGSNF 158 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGED 181 Query: 159 LLSMLRL--------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L +R EI + D + TP L + A + + L Sbjct: 182 HNPETHLIPLILKVPLGQREEIFIFGDDYDTPDGTCIRDYIHVLDLVDAHVLALNKLRNG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 +D+ ++++ G + + + + G + I + A RP + Sbjct: 242 ADSD---VYNLGNGNGFS-----VKEVIEAARQVTG-----HPIPARVM---ARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 KLVASSDKAKRELGWEP 302 >gi|91202893|emb|CAJ72532.1| similar to TDP-rhamnose synthetase, NAD(P)-binding [Candidatus Kuenenia stuttgartiensis] Length = 330 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 106/294 (36%), Gaps = 28/294 (9%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDVEIIRVGRP---------DIDLLKPKDFASFFLSF 49 L+ G NG + S + V IR R +D+ + A+ ++ Sbjct: 9 ILITGVNGVPGYNAFRHFHSQYPEHVVAIRPTRYWPLRGEGIIPLDIEDVQGLAALMKTW 68 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 + I++ A A+ E PE+A+ +N + A I K I +++STD VF G S Sbjct: 69 KFNSILHAAGSCALKSCELNPEMAYRVNVQSAKNILKIIGDRTIRLLFLSTDLVFPGKSS 128 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNF---LLSMLRLA 166 E +P+ +YGK+ + EE +A + VI R + I + + +L Sbjct: 129 GCYTESDAVSPVTVYGKTMVMAEEIIAHEYPSAVIFRISLPMGISVNGHAGAIDWILSRF 188 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 K+ ++ D+ +P +I +IA + + GI+H+ +S Sbjct: 189 KKNNPATLYYDEIRSPFYCEDF-NSIAEIAL------ENKICGIYHL-GSHRYLSLYQIG 240 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI-STW 279 + + RI P R + KL W Sbjct: 241 QIVNKVGGYSPRLLKGCMRIEAGPMP---PRAGNVAMSNKKLLAALGFDPFRKW 291 >gi|3832509|gb|AAC70777.1| dTDP-4-keto-L-rhamnose reductase [Klebsiella pneumoniae] Length = 296 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 43/313 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR--PDI--DLLKPKDFASFFLSFSPDVIIN 56 M +IGNNGQ+ L +++ V ++ DL + A PDV++N Sbjct: 1 MNISLIGNNGQVGWELHRSLSFLGDVVAVDYFDKELCGDLTNLEGVAHTVRPVRPDVVVN 60 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP--------CIYISTDYVFDGLS 108 AA++ P + + ++ STDYVFDG Sbjct: 61 AAAHS--------PWTRLKSIGSFPTCLIRQMGGGAGGGVGELGALMVHYSTDYVFDGAG 112 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 E T PLN+YG++K AGE + ++I RT+WVY+ G+NF +MLRLA E Sbjct: 113 SHYRREDEATGPLNVYGETKRAGELALQQGNPRHLIFRTSWVYATRGANFAKTMLRLAGE 172 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV-------- 220 + ++++ D PT A +A + N + G +H+ A G Sbjct: 173 KETLTIIDDLLWAPTGAELLADCTATAIRETLRNPALA--GTYHLVASGETAGATMPAMC 230 Query: 221 -SWADFAEYIFWESAERGGPYSKVYRI--FTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 W + +G P + + Q K+ + + Sbjct: 231 LKWRERTVPSLAVQEVKGIPNDGLSDAGEASAQL-APVE---------LKIQQAFGVTLP 280 Query: 278 TWKEGVRNILVNI 290 W++GV ++ + Sbjct: 281 DWRQGVARVVTEV 293 >gi|114566267|ref|YP_753421.1| carbohydrate oxidoreductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337202|gb|ABI68050.1| carbohydrate oxidoreductase, putative [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 302 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 107/300 (35%), Gaps = 45/300 (15%) Query: 2 KCLVIGNNGQIAQSL--SSMCVQDVEIIRVGRPD------------------IDLLKPKD 41 + L++G G + +L M ++++ R +D Sbjct: 16 RVLILGGTGMLGHTLFSQLMLEPNLDVYATARSSEGLKEWFPADMVSKIRIGVDADNFDT 75 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV+IN +P A ++N+ I+ + G I+ISTD Sbjct: 76 VIRALASIQPDVVINCIGLIKQLPISSDPLSAITVNSLLPHRISLVCRTAGARLIHISTD 135 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF+G E P++ ++YG+SK GE + V +RT+ + L Sbjct: 136 CVFNGSKGN-YTEQDPSDAQDLYGRSKFLGE----VSYPHCVTIRTSIIGHELKGKLGLI 190 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 LA+E I + +++AR I ++ + L G++H++++ P+S Sbjct: 191 EWFLAQEG-SIRGFTKAIYSGFPTVELARIIREVVL-----PNKELSGVYHVSSE--PIS 242 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 D A + G + + L+ + + +W+E Sbjct: 243 KYDL----LNLVATKYGKKIVIEPYH--DFV------QDRSLNSDRFRQATGYQPPSWEE 290 >gi|319950774|ref|ZP_08024663.1| dTDP-4-dehydrorhamnose reductase RmlD [Dietzia cinnamea P4] gi|319435565|gb|EFV90796.1| dTDP-4-dehydrorhamnose reductase RmlD [Dietzia cinnamea P4] Length = 222 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 35/202 (17%) Query: 115 FSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------SIFGSNFLLSMLRLA 166 T+P +YG++KLAGE V + ILRT+W+Y +I G +F+ +M RL Sbjct: 2 TDATDPATVYGRTKLAGEHAVLAAHPEATILRTSWLYTGPERERWAIPGGDFVATMARLE 61 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHN------------------------LIEN 202 +ER E+SVV DQ+G+PT A +A AI+++ +++ Sbjct: 62 RERDEVSVVDDQWGSPTHAPTLAAAILEMLAREAATHHAAGEAAAHAGTGTDAAAPAVDS 121 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 RG+ A G +W + A F A G ++V T +P A RPA+S Sbjct: 122 PGVDTRGLVLHAAGSGRATWYEVARRTF---AYLGADPARVRPCTTADFPRPAPRPAFSV 178 Query: 263 LDCSKLANTHNIRISTWKEGVR 284 L A + W + +R Sbjct: 179 LSGRAWAAAGLTPLPDWDDSLR 200 >gi|261418019|ref|YP_003251701.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|319767167|ref|YP_004132668.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] gi|261374476|gb|ACX77219.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC61] gi|317112033|gb|ADU94525.1| UDP-glucose 4-epimerase [Geobacillus sp. Y412MC52] Length = 328 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 58/317 (18%), Positives = 100/317 (31%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ + + ++ V PD D+ F Sbjct: 2 ILVCGGAGYIGSHAVYRLLEKGERVVVVDNLQTGHREAVHPDAVFCQGDIRDRDFLREVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 + II+ AA + V ++ +EP + N G + + G+ ++ ST V+ Sbjct: 62 RQHDIEAIIHFAANSLVGESMEEPLKYYDNNVYGTQVLLEVMREFGVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV-------YSIFGSNF 158 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTEPTNAYGETKLAMEKMMKWADRAYGIRSISLRYFNVAGAYGTTIGED 181 Query: 159 LLSMLRL--------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L +R EI + D + TP L + A L Sbjct: 182 HNPETHLIPLILKVPLGQREEIYIFGDDYDTPDGTCIRDYIHVLDLVNAHWLALEKLRSG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 +D+ ++++ G + + + + G + I + A R PA Sbjct: 242 ADSD---VYNLGNGNGFS-----VKEVIEAARQVTG-----HPIPAR---VVARRLGDPA 285 Query: 260 YSCLDCSKLANTHNIRI 276 K Sbjct: 286 RLVASSEKAKRELGWEP 302 >gi|182412672|ref|YP_001817738.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] gi|177839886|gb|ACB74138.1| dTDP-4-dehydrorhamnose reductase [Opitutus terrae PB90-1] Length = 314 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 113/305 (37%), Gaps = 32/305 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------------EIIRVGRP-DIDLLKPKDFASFFL 47 M+ L+ G +G + + + + E+ + R +DL Sbjct: 1 MRILLTGASGLVGSAFARIAAASGQEVVGVVGRFGGELPGLARRCMLDLTDAAATTRAVE 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + +P+VI+N AA + E + + ++N +A+ A +G ++IS++ VFDG Sbjct: 61 AETPEVIVNAAAISEPAVCELDGVRSEAMNVALPALLARLAVRLGARFLHISSEQVFDGE 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-YTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 P P P+N YG+ KLA E V + I+R + RL Sbjct: 121 RSEPYSITDPPRPINRYGRQKLASEHAVREIAGASAAIVRAPLLMGDSAGGKRALHERLL 180 Query: 167 KE---RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 + R + D+ P +A +AR ++++A L G+FH +S Sbjct: 181 ADWAAGRTARLYIDELRQPCTAENLARVLLELAAR------AELTGVFHWAG-ADLLSRH 233 Query: 224 DFAEYIFWESAERGGPYSKVYRIFT---KQYPTKAHRPAYS-CLDCSKLANTHNIRISTW 279 + ER V I + P A S LD LA+ R + Sbjct: 234 ----ALGLRVRERFELTDAVAPIVATRRAETPVIARERQASLALDLEPLASRLATRPQSI 289 Query: 280 KEGVR 284 +E + Sbjct: 290 EEQLA 294 >gi|156740402|ref|YP_001430531.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] gi|156231730|gb|ABU56513.1| dTDP-4-dehydrorhamnose reductase [Roseiflexus castenholzii DSM 13941] Length = 281 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 35/289 (12%) Query: 3 CLVIGNNGQIAQSLSSMC-VQDVEIIRVGR-----------PDIDLLKPKDFASFFLSFS 50 L+ G +G + +L + Q ++ +DL + + Sbjct: 7 ILITGGSGFLGSALVNTARAQGWNVVATYHSHQPRISGVRWEMLDLRNGAATRTLIEQIA 66 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 PDV+I+ A Y + P++ +I A GAGA+A+ A + I++S+D VFDG Sbjct: 67 PDVVIHTA-YRQ-----EGPDM-MAITAGGAGAVAQGAVMVRARLIHLSSDVVFDGERSG 119 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI--FGSNFLLSMLRLAKE 168 E P+ YG +K E VA +I+RT+ +Y +L + Sbjct: 120 RYTEADAPQPVTAYGAAKADAERLVADTHPAALIVRTSLIYGGPKCPGRHEQFVLDVIDG 179 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R E D++ P +A A L+E + GI H+ VS +FA Sbjct: 180 RAEAIFFTDEWRCPIEVGDLAAA-------LLELAVLDRSGILHVAGPD-VVSRYEFACL 231 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS 277 + + G V + P RP LDC + +RI Sbjct: 232 V---AHALGRDPMHVRGGPS---PKDLRRPRNCALDCRLAQSILTVRIR 274 >gi|296134321|ref|YP_003641568.1| NAD-dependent epimerase/dehydratase [Thermincola sp. JR] gi|296032899|gb|ADG83667.1| NAD-dependent epimerase/dehydratase [Thermincola potens JR] Length = 308 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 103/319 (32%), Gaps = 53/319 (16%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEII-----RVGRP----------DIDLLKPKDFAS 44 MK LV G G I + + ++ E++ G P +D+ D Sbjct: 1 MKVLVTGGAGFIGSHIVDRLILEGYEVVVADNLSTGSPANINAESRFYQVDIT-GDDLQD 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F P+V+I+ AA V A+ EP N G + + + IY S+ V Sbjct: 60 LFAKEKPEVVIHHAAQADVQVAQREPVFDSMTNILGTVNLLQCCITYNAKKLIYASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + P+DE P NP++ YG SK E + ++ NY ILR A VY Sbjct: 120 YGAPCYLPVDENHPVNPISNYGISKYVPELYIKAFHKNFNLNYTILRYANVYGPRQGLKG 179 Query: 158 -----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 FL + LA E I +Q I A + + G Sbjct: 180 EGGVVFLFARRFLAGEPPLIYGDGEQTRDFVFVEDIVNA--NLLALEQGDGMVINIGTGA 237 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY---SCLDCSKLA 269 + S IF +Y RP S D S Sbjct: 238 QVSVNDLCSRF---REIFKSDLR-------------AEYLEP--RPGDIKKSVFDISLAK 279 Query: 270 NTHNI-RISTWKEGVRNIL 287 N + + + G+R + Sbjct: 280 NVLGWQPLVSLETGLRQTI 298 >gi|302669946|ref|YP_003829906.1| dTDP-4-dehydrorhamnose reductase RfbD2 [Butyrivibrio proteoclasticus B316] gi|302394419|gb|ADL33324.1| dTDP-4-dehydrorhamnose reductase RfbD2 [Butyrivibrio proteoclasticus B316] Length = 269 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 99/273 (36%), Gaps = 32/273 (11%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 LV G G + L +C V + +D D I+N AA + Sbjct: 2 ILVTGTTGFVGSKLMKICKDVVAAPSLRNASLD-----HIKRIVSESGADTIVNTAAISD 56 Query: 63 VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPL 121 + + + PE ++ N + +AKA + G I S+D V+ G P E + NP Sbjct: 57 IGECQKNPESSYIANVQLPVFLAKACE--GRKLICFSSDQVYGGLEDNGPYTEEN-VNPA 113 Query: 122 NIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGT 181 NIY K KL E++V + V+LR W+Y + + + + ++ Q+ Sbjct: 114 NIYAKYKLEMEQRVLDICPDAVMLRAEWMYDYYVKKS-NYYMNIVNAKDAVAFSSRQYRG 172 Query: 182 PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS 241 T ++A + EN + GI++ S + I + E G Sbjct: 173 ITYVKEVAENM--------ENVISLPGGIYNF-GSETTKSMYE----ITSQFIEELGLEI 219 Query: 242 KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 ++ A +DCSK I Sbjct: 220 RLED-------APAR--HNLWMDCSKAKRYGVI 243 >gi|310643492|ref|YP_003948250.1| udp-glucose 4-epimerase, gale [Paenibacillus polymyxa SC2] gi|309248442|gb|ADO58009.1| UDP-glucose 4-epimerase, galE [Paenibacillus polymyxa SC2] Length = 329 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 116/327 (35%), Gaps = 55/327 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 M LV G G I ++ + E++ + + DL + + Sbjct: 1 MAILVTGGAGYIGSHTVAELLDLGEEVVVLDNLQTGHKGALLGGKLYEGDLRDKELLSKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + D +I+ AA + V ++ P + N G ++ +A G ++ ST + Sbjct: 61 FSENNIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMKDAGVSKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 + PI+E T P N+YG++KL E ++ + I + Y S + Sbjct: 121 GEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYVSLRYFNAAGAHESGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 R K+R I+V + + TP +A A ++ + L Sbjct: 181 EDHRPESHLIPLVLQTALKQRPHIAVFGEDYATPDGTCVRDYIHVSDLADAHVRAVNYLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 E +D++ IF++ G + + + + G + T+ P +A PA Sbjct: 241 EGNDSN---IFNLGNGQGFS-----VKEVIETARKVTGLD---IPVVTE--PRRAGDPAI 287 Query: 261 SCLDCSKLANTHNIRISTWKEGVRNIL 287 K + + + +I+ Sbjct: 288 LVASSDKARSVLGWSPK--RTQLEDII 312 >gi|282601176|ref|ZP_05981009.2| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] gi|282569884|gb|EFB75419.1| putative dTDP-4-dehydrorhamnose reductase [Subdoligranulum variabile DSM 15176] Length = 281 Score = 143 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 108/294 (36%), Gaps = 32/294 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 M+ L+ G G + + +E++ + + ++ PD I++ AA Sbjct: 2 MRVLLTGAGGFLGARILQQLAGRLELLTLPHGLMARAGQEELREAVARLHPDAILHTAAL 61 Query: 61 TAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTN 119 + E PE ++ N E +A+AA + G + S+D V+ G P E +P + Sbjct: 62 SDTGYCEAHPEESYRANVEVPFWLAEAARAAGAKLVAFSSDQVYAGLQEHGPFTENTPLS 121 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI------FGSNFLLSMLRLAKERREIS 173 P N+YG+ K E++V V+LR W+Y + N L++LR A+ + Sbjct: 122 PANVYGRHKREAEQRVLDILPGAVLLRATWLYDLPGYGLPIRGNLPLNLLRAARTGEVLR 181 Query: 174 VVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWES 233 + T A Q A++ G+++ ++ D Sbjct: 182 FSRRDYRGVTYARQAVEALLPALEL--------PGGVYNFGSENNT----DMVTTARQFC 229 Query: 234 AERGGPYSKVYRIFTKQYPTKAHRPAYSCL-DCSKLANTHNIRISTWKEGVRNI 286 G + +P S L D +K A + + +G+R Sbjct: 230 QVLGIDP----PLEAADWPR-------SLLMDTTK-ARAGGLAFDSTADGIRRC 271 >gi|315645840|ref|ZP_07898961.1| UDP-glucose 4-epimerase [Paenibacillus vortex V453] gi|315278601|gb|EFU41915.1| UDP-glucose 4-epimerase [Paenibacillus vortex V453] Length = 329 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 110/330 (33%), Gaps = 61/330 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDI--------------DLLKPKDFASF 45 M LV G G I ++ + + E++ + + DL Sbjct: 1 MAILVTGGAGYIGSHTVAELLEKGEEVVVIDSLETGHREALLGGKLYVGDLRDKTLLNQL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA + V ++ +P + N G + +A + G ++ ST + Sbjct: 61 FSENDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVRKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLL 160 + PI+E T P N+YG++KL E ++ + YV LR S + Sbjct: 121 GEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFNAAGSHASGSIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 R K+R ISV D + TP T + +A+ + + Sbjct: 181 EDHRPESHLIPLVLQTALKQRPSISVFGDDYSTPDGTCVRDYIH-VSDLANAHLRAVEYL 239 Query: 207 LRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 RG +F++ G + + S G V +A R PA Sbjct: 240 RRGEPSNVFNLGNGLGFS-----VKEVIETSRRVTGADIPVV--------MEARRSGDPA 286 Query: 260 YSCL--DCSKLANTHNIRISTWKEGVRNIL 287 L K S K + I+ Sbjct: 287 --VLVASSDKARTVLGWTPS--KTSLEEII 312 >gi|282164741|ref|YP_003357126.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] gi|282157055|dbj|BAI62143.1| putative dTDP-4-dehydrorhamnose reductase [Methanocella paludicola SANAE] Length = 288 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 25/294 (8%) Query: 3 CLVIGNNGQIAQSLSSMCV---------QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 L++G G + ++ ++ G D+ D A P Sbjct: 2 ILIVGC-GPMGSAIHEALKDKEVSWACDKEHPYPASGCTGYDIKNSADVARVVKQAKPQH 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP-I 112 +I ++V+ E A N G +A+ S+ IY+S+ +VFDG Sbjct: 61 LILTEEISSVEYCEKNRLDAMEFNTRGTRFFVEASSSLRPRVIYLSSAFVFDGRKPGGLY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E NP+N+YG++KL GE V +++ LR VY F NF+ ++ ++I Sbjct: 121 AEHDHVNPINVYGETKLMGEVAV-DKAADHITLRLGDVYGNFSDNFVNFVVSSLNYGQKI 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + D + +P +A+A+ + ++ G++++ +S + Sbjct: 180 ELARDMYFSPIYIEDVAKAVRLLTLE-------NMSGLYNVAGTE-RISHYEMG---LRV 228 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNI 286 + G + + ++ P LD SK++ I+I EG+ + Sbjct: 229 ARAFGLKEDMLVPLSMEEMGLTVRMPKDLSLDTSKISTL--IKIRGIDEGLEAM 280 >gi|328885634|emb|CCA58873.1| dTDP-4-dehydrorhamnose reductase [Streptomyces venezuelae ATCC 10712] Length = 275 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 106/301 (35%), Gaps = 39/301 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV---EIIRVGRP---------DIDLLKPKDFASFFLS 48 MK L+IG +G + L + RP +D+ + + Sbjct: 1 MKMLIIGGSGFLGTELLRQARGQGWAADASYHSRPGVTQNGAWHQLDVRSRAQVEALLAT 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P +IN +++ A+G+ +A AA +GI +++S+D VF GL Sbjct: 61 VAPCAVIN----------VSSGGADWAVTADGSVHVAMAAARLGIRLVHVSSDAVFSGLG 110 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K AGE V + ++RT+ + S + LA Sbjct: 111 RARYDETCTPDPITPYGAAKAAGETAVRILCPDAAVVRTSLIIGDGDSEHERVVHELAAN 170 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R+ ++ D P +A + ++A + G+FH+ +S Sbjct: 171 ERQGALFTDDIRCPIHVADLASGLWKLAA-------SGRAGVFHLAG-ADALSRYSLGVL 222 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 I + G S + LD + IR+ G R L Sbjct: 223 I---ARRDGISPSLLPAGRRADLRLPGA--LDVRLDSHATQDRLGIRLR----GAREFLG 273 Query: 289 N 289 Sbjct: 274 E 274 >gi|15604200|ref|NP_220715.1| hypothetical protein RP332 [Rickettsia prowazekii str. Madrid E] gi|3860892|emb|CAA14792.1| unknown [Rickettsia prowazekii] gi|292571939|gb|ADE29854.1| dTDP-4-dehydrorhamnose reductase [Rickettsia prowazekii Rp22] Length = 284 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 111/305 (36%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-----------------IDLLKPKD 41 MK L++G G + S+ QD + R + +D+ Sbjct: 1 MKILILGVTGMLGNSMFRFLTQDSKFNVCATARSNAASLYFSKDLTNKLITNVDVENHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +PDV+IN ++P A IN+ +A IG I+ISTD Sbjct: 61 LVEVLNKTNPDVVINCIGLVKQLADVNDPLKALPINSLLPHRLANLCGLIGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G R E + ++YG+SK GE + + LRT+ + SN L Sbjct: 121 CVFSG-KRGNYKESDFPDCNDLYGRSKFLGEVDY----PHAITLRTSIIGHELASNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + ++ AR I +T L G++H+ + P++ Sbjct: 176 NWFLSTEGY-VKGFTKAIYSGFPTVEFARIIRDFVL-----PNTELHGLYHVASH--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 D + + + ++ I + + R LD ++ + + W+E Sbjct: 228 KFDLLKLVAEIYNK------EIEIIPSDE--LIVER----SLDSTRFNSITGYKPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|18978160|ref|NP_579517.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] gi|18893965|gb|AAL81912.1| NDP-sugar dehydratase or epimerase [Pyrococcus furiosus DSM 3638] Length = 307 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 114/318 (35%), Gaps = 51/318 (16%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEIIRVG---------------RPDIDLLKPKDF 42 MK +V G G I ++ V++ E+I + + D+ Sbjct: 1 MKNKLVVVTGGAGFIGSHIAEALVEENEVIVIDNLYSGKIENIPQGAKFIEADIRDYSSI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V+++ +P +N G I KA I+ S+ Sbjct: 61 AEIIREA--DYVFHEAAQISVEESVRDPIFTDEVNVIGTLNILKALSEGSGKIIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 V+ P+ E P++ YG SKLAGE V + Y VILR VY S+ Sbjct: 119 VYGENKNLPLKEDYLPKPISPYGVSKLAGEHYVRVFYELYGVPGVILRYFNVYGPRQSSA 178 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ A + + + D Q + + A+ L+ + + IF+ Sbjct: 179 YAGVISIFMKNALKNEPLVIFGDGKQTRDFIYVKDVVQ-----ANLLVAEKERANGKIFN 233 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 + A G S + A I ++ + Q RP S D +++ Sbjct: 234 V-ATGKETSILELALKIIDLTS------------SSSQILFAPERPGDIKRSVADINEIR 280 Query: 270 NTHNIRISTWKEGVRNIL 287 + +EG++ L Sbjct: 281 KLGFEPSYSLEEGLKETL 298 >gi|87123123|ref|ZP_01078974.1| hypothetical dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] gi|86168843|gb|EAQ70099.1| hypothetical dTDP-4-dehydrorhamnose reductase [Synechococcus sp. RS9917] Length = 289 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 78/288 (27%), Positives = 123/288 (42%), Gaps = 28/288 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRP-----DIDLLKPKDFASFFLSFSPDVII 55 K LV G G + SL + ++IR+G +IDL+ + A + PDVII Sbjct: 3 KVLVTGATGLLGCSLVPFLQECGHQVIRMGNTRASDLNIDLVSYEQTARALDNTKPDVII 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--IPCIYISTDYVFDGLSRTPID 113 N AA T VD+ E P+ A+ +N + + + G I ISTD V+DG P Sbjct: 63 NLAALTNVDRCETHPQEAYLLNVKAVENLCAWIKTAGQVCHLIQISTDQVYDGPG--PHS 120 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG--SNFLLSMLRLAK-ERR 170 E T N Y SKLAGE + + T + ILRT +V L L A ++ Sbjct: 121 EGELTI-CNFYAMSKLAGE--IIAGTVSSTILRTNFVGRSLCGGRASLTDWLHCALIDQT 177 Query: 171 EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIF 230 ++V D +P + + I G+F++ + G A++ F Sbjct: 178 AVNVFEDVMFSPLAISTLCDCIEHCIVER-------PPGVFNLGSREGMSK----ADFAF 226 Query: 231 WESAERGGPYSKVYRIFTKQYPTK-AHRPAYSCLDCSKLANTHNIRIS 277 +A RG + + R+ +K T A RP C++ + +I++ Sbjct: 227 AFAAARGLETTNLKRVNSKSITTLVARRPTDMCMNSGRFEECMDIKLP 274 >gi|288920546|ref|ZP_06414852.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] gi|288348039|gb|EFC82310.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EUN1f] Length = 361 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 109/296 (36%), Gaps = 43/296 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------------IDLLKPKDFASFF 46 M+ LV+G +G + L V+D ++ R +D+ P+ F Sbjct: 1 MRVLVLGGDGMLGGELVRRLVRDHDVTATVRAHAPSSPSPADRVLCGVDVRHPESLVDVF 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 + PD ++N TA E + A +NA +A+ + G +++STD VF G Sbjct: 61 AATRPDAVVNAVGLTARRVGEQGVQPAIEVNALFPHRLARLCGAAGARLVHVSTDCVFSG 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKL---AGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 E +P++ +G +KL E + + + L TA V + FL + Sbjct: 121 RLGE-YHEDDVPDPVDAHGTTKLLGELTEPGTLTLRTSVLGLETAAVPAGLVEWFLSATG 179 Query: 164 RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA 223 R+ RR + + + + AR + +L L G++H+ ++ P++ Sbjct: 180 RIPGYRRVV-------YSGVTTAEFARFV-----HLALVGHPDLSGVWHLASE--PITKF 225 Query: 224 DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 D + + G ++ + L +L + R W Sbjct: 226 DL---LTMLADRLGRHNLEIVP-SDDEV-------RNRALSARRLWSVTGYRPPAW 270 >gi|42572791|ref|NP_974492.1| methionine adenosyltransferase regulatory beta subunit-related [Arabidopsis thaliana] gi|124301070|gb|ABN04787.1| At4g00560 [Arabidopsis thaliana] gi|332656500|gb|AEE81900.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] Length = 253 Score = 142 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 33/234 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVGRP-----------------DIDLL 37 K L++G G + Q L + ++ +DL Sbjct: 6 KVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAFPVDLK 65 Query: 38 KPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPC 95 S F PDV++N AA + E +P+ A SIN + + ++ Sbjct: 66 SGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLL 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I++STD V+ G+ + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 126 IHLSTDQVYQGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQT 184 Query: 156 SNFLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 + L L + K+ + D+F P + ++ + Sbjct: 185 VSPLPKTLPIQWIDSSLKKGDTVDFFHDEFRCPIYVKDLVNITFKLIDRWVSGR 238 >gi|323703699|ref|ZP_08115340.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531352|gb|EGB21250.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 104/321 (32%), Gaps = 59/321 (18%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP--------DIDLLKPKDFASF 45 M+ LV G G I ++ + E++ + R ++D+ Sbjct: 1 MQILVCGGAGYIGSHAVRELYRAGYEVLVLDNLVKGHREAIGDIPLVEVDINDKPSLEQV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +++ AAY+ V ++ EP + N G + + S G I+ ST V+ Sbjct: 61 FQKQKIDAVMHFAAYSLVGESVVEPAKYYHNNVLGTLNLMEVMLSYGVKRIIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E PT P N YG +KLA E + +Y NYV LR + + Sbjct: 121 GEPVELPITEEHPTRPTNPYGATKLAVEGMLHWFGQAYGLNYVSLRYFNAAGADVAGDIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + R EI + + TP +A A + +I Sbjct: 181 EDHQPETHLIPLVLQTALGVRPEIKIFGTDYPTPDGTCIRDYIHVTDLANAHLLALEKII 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ I+++ G + + E G KV RP Sbjct: 241 NEGGSA---IYNLGNGSGFS-----VREVIQVAQEVTGKLIKVMEAE--------RRPGD 284 Query: 261 -SCL--DCSKLANTHNIRIST 278 + L K+ + Sbjct: 285 PAVLVASSEKIKKELGWQPRY 305 >gi|239827438|ref|YP_002950062.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] gi|239807731|gb|ACS24796.1| UDP-glucose 4-epimerase [Geobacillus sp. WCH70] Length = 328 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 101/315 (32%), Gaps = 55/315 (17%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ E +I V P+ D+ F Sbjct: 2 ILVCGGAGYIGSHAVYRLIEKGEKVIVVDNLQTGHREAVHPEATFYQGDIRDRAFLRDVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +I+ AA + V ++ EP + N G + + + G+ ++ ST V+ Sbjct: 62 RKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNEFGVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------SI 153 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTLPTNTYGETKLAMEKMMKWVDRAYGIRYISLRYFNVAGAYGTIIGED 181 Query: 154 FGSNFLLSMLRL---AKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLR 208 L L L +R EI + D + TP T + + I + Sbjct: 182 HNPETHLIPLILKVPLGQREEIHIFGDDYDTPDGTCIRDYIHVL-DLVDAHILAVEKLRS 240 Query: 209 G----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL 263 G ++++ G + + + + G + I + A RP + L Sbjct: 241 GAESTVYNLGNGSGFT-----VKEVIEAARKVTG-----HPIPARVM---ARRPGDPAKL 287 Query: 264 --DCSKLANTHNIRI 276 K Sbjct: 288 VASSEKAKRELGWEP 302 >gi|51473527|ref|YP_067284.1| dTDP-4-keto-L-rhamnose reductase. [Rickettsia typhi str. Wilmington] gi|51459839|gb|AAU03802.1| dTDP-4-keto-L-rhamnose reductase [Rickettsia typhi str. Wilmington] Length = 284 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 113/305 (37%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ QD ++ R ++D+ Sbjct: 1 MKILILGVTGMLGNSMFRFLTQDSKFDVCATARNNAATLYFSKDLTNKLITNVDVANHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 +PDV+IN ++P IN+ +A IG I+ISTD Sbjct: 61 LVEVLNKINPDVVINCIGLVKQLADVNDPLKVLPINSLLPHRLANLCGLIGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G R +E + ++YG+SK GE + + LRT+ + SN L Sbjct: 121 CVFSG-KRGNYNESDFPDCDDLYGRSKFLGEVDY----PHAITLRTSIIGHELSSNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + ++ AR I +T L G++H+ ++ P++ Sbjct: 176 NWFLSTEG-CVKGFAKAIYSGFPTVEFARIIRDFVL-----PNTELHGLYHVASN--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 D + + + ++ I + + R LD ++ + + W+E Sbjct: 228 KLDLLKLVAEIYNK------EIEIIPSDE--LIVER----SLDSTRFNSITGYKPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|323703743|ref|ZP_08115382.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] gi|323531267|gb|EGB21167.1| UDP-glucose 4-epimerase [Desulfotomaculum nigrificans DSM 574] Length = 329 Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 54/323 (16%), Positives = 105/323 (32%), Gaps = 58/323 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEII-----------RVGRPDI---DLLKPKDFASF 45 M LV G G I + + E++ +G D+L +D Sbjct: 1 MHILVCGGAGYIGSHVVRQLQRSGYEVLVLDNLANGHLSAIGDTPFVWGDILDKRDLQLV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +++ AA++ V ++ +P + N G + +A I+ ST V+ Sbjct: 61 FHQNRIDAVMHFAAFSIVGESVQQPSTYYRNNVAGTLNLLEAMQEHRVNKLIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E T P N YG +KLA EE + ++ Y + + Y Sbjct: 121 GEPKEIPITEDHQTKPTNPYGATKLAVEEMLKWFSQAYGLKYVSLRYFNAAGADDSGDMG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + L + E+ + + TP +A A I +L+ Sbjct: 181 EDHNPETHLIPLVLKTALGVLPEVKIFGTDYPTPDGTCIRDYIHVNDLANAHILALQSLL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ ++++ G + + + G +V T++ A Sbjct: 241 SGGKSA---VYNLGNGNGFS-----VREVIDTAKKVTGKSIRVVE-TTRRIGDPA----- 286 Query: 261 SCL--DCSKLANTHNIRISTWKE 281 L K+ + +++ Sbjct: 287 -VLVASAEKIKRELGWQ-PQFRD 307 >gi|309799686|ref|ZP_07693905.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus infantis SK1302] gi|308116715|gb|EFO54172.1| dTDP-4-keto-L-rhamnose reductase [Streptococcus infantis SK1302] Length = 157 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 129 LAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI 188 E V +N+ I+RTA + + NF+ +M LAK + ++VV DQ G PT + Sbjct: 5 RDNEFYVIKLVSNFYIIRTACFFGNYVKNFVFTMQNLAKTHKTLTVVNDQHGRPTWTRTL 64 Query: 189 ARAIIQIAHNLIENSDTSLRGIFHMTADGGP-VSWADFAEYIFWESAERGGPYSKVYRIF 247 A + + N E G +H++ D +W DFA I ++ +V + Sbjct: 65 AEFMTYLTENRKE------FGYYHLSNDATEDTTWYDFAVEILKDT------DVEVKPVD 112 Query: 248 TKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 + Q+P KA RP S + +K T I TW++ ++ Sbjct: 113 SSQFPAKAKRPLNSTMSLAKAKAT-GFVIPTWRDALKEFFKQ 153 >gi|289578903|ref|YP_003477530.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] gi|289528616|gb|ADD02968.1| UDP-glucose 4-epimerase [Thermoanaerobacter italicus Ab9] Length = 329 Score = 141 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 109/329 (33%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I ++++ + E++ V + + DL Sbjct: 1 MAILVCGGAGYIGSHTVAALLNRKEEVVVVDNLVKGHKKSVLGGKLYIGDLRDEAFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA++ V ++ +EP + N G ++ KA ++ ST V+ Sbjct: 61 FKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMKKHNVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI E TNP + YG++KLA E+ + Y I A Y Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALRYFNVAGAIETGEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI-------AHNLIE 201 S + + +R +I + D + PT R I + L + Sbjct: 181 EDHSPETHLVPIILQVALGKRDKIRIYGDDY--PTKDGTCIRDYIHVMDLADAHILALDK 238 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY- 260 + I+++ G + + + + G + I + RP Sbjct: 239 LRKDNESAIYNLGNGEGFS-----VKEVIEVARKVTG-----HPIPAE---VTHRRPGDP 285 Query: 261 SCL--DCSKLANTHNIRISTWKEGVRNIL 287 + L K+ + I+ Sbjct: 286 AVLVASSEKITKELGWTPKY--TSLEEII 312 >gi|147918713|ref|YP_687564.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] gi|110622960|emb|CAJ38238.1| dTDP-4-dehydrorhamnose reductase [uncultured methanogenic archaeon RC-I] Length = 289 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 100/279 (35%), Gaps = 23/279 (8%) Query: 3 CLVIGNNGQIAQSLSSM---------CVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDV 53 LV G G + L C + I G + K +D P + Sbjct: 2 ILVTGC-GPLGAGLVKAMEDQPAKGACDESNPDIPRGFMTYNFEKEQDIRRIVDVEKPKI 60 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS-RTPI 112 ++ V+ E+ A N A+AA ++G + S+ VFDG Sbjct: 61 LVLTEEIDNVEYCEENRMDAMYYNTRAQRYFAEAAQNVGARLVLRSSAMVFDGRKPGGMY 120 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREI 172 E TNPLN+Y ++K+ E V T +++++R +Y + NF ++ + + Sbjct: 121 TEEDHTNPLNVYAETKVMAETAV-DRTKDFLVVRLGELYGAYFDNFASHLVESLSMGQNV 179 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 + D + +P AI ++ N + G +H+ +S +F + I Sbjct: 180 ELATDMYFSPIYLDDAIAAIKELTLN-------GMTGFYHVAGPE-RLSHYEFGKKI--- 228 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 + G ++ I P + L +KL Sbjct: 229 ARAFGFSEDRLVPITMADLKLTVLVPRDTSLSSAKLNAL 267 >gi|15892379|ref|NP_360093.1| putative dTDP-4-dehydrorhamnose reductase. [Rickettsia conorii str. Malish 7] gi|15619528|gb|AAL02994.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia conorii str. Malish 7] Length = 284 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 104/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLNSDKKFDIFATARNNSARSYFSKDLSDKLITNVDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SKL GE + + LRT+ + N L Sbjct: 121 CVFSGKK-GHYKESDFSDCYDLYGRSKLLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + AE + I + + LD ++ W+E Sbjct: 228 KLEL----LKLVAEIYNKDIDI--ISSDELVV------DRSLDSTRFNEVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|147679101|ref|YP_001213316.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] gi|146275198|dbj|BAF60947.1| nucleoside-diphosphate-sugar epimerases [Pelotomaculum thermopropionicum SI] Length = 314 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 107/318 (33%), Gaps = 51/318 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GR-----PDIDLLK----PKDFASF 45 MK LV G G I + + ++ V GR P ++ + ++F Sbjct: 1 MKILVTGGAGFIGSHIVDLLAGSGHVVSVADDLSTGRFENINPAVNFYRVSVASEEFGEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 PD +++ AA V + +P N +G+ + +A G+ +Y S+ V+ Sbjct: 61 VARERPDAVVHQAAQVDVQHSLRDPLADAETNIQGSINLLEACRRFGVGKVVYASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS---- 156 P+DE P P + YG SKLA E Y+ Y +LR A VY Sbjct: 121 GNPLSLPVDEEHPLVPRSPYGASKLAAEHYFRVYSEVYGVRYTVLRYANVYGPRQDAAGE 180 Query: 157 -NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + + + S+ D Q +A A + H G+ Sbjct: 181 GGVVAIFIDRLLKGEPPSIFGDGEQTRDFVFVRDVALANVAALH--------GGDGMVLN 232 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLAN 270 G S D F E + G + RP +S L ++ Sbjct: 233 VGTGRATSVNDL----FREIKKITGSPLEALYCP--------PRPGDITHSYLANGRIRR 280 Query: 271 THNIRIS-TWKEGVRNIL 287 S + ++G+R + Sbjct: 281 VLGWNPSCSLEDGLRETV 298 >gi|307102810|gb|EFN51077.1| hypothetical protein CHLNCDRAFT_141448 [Chlorella variabilis] Length = 332 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 63/320 (19%), Positives = 110/320 (34%), Gaps = 49/320 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVGR----PD----------IDLLKPKDFASFFL- 47 L+ G G Q + P ++L K + + Sbjct: 4 ILITGGTGYFGQFCVEFFAASGCQVGYTHWSSGPQRHCGKVLPFKVNLAKGEGLEACLQG 63 Query: 48 -----SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-----CIY 97 + +IN AA + E + A ++N +A A I+ Sbjct: 64 LTRGGALRLVAVINAAAISQPAACERDEAAAAAVNVP-THLLAALAWHRQQHGAEPLLIH 122 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN 157 +STD V+DG E P P+N YG++KLA E VA+ N+ ILR++ ++ Sbjct: 123 MSTDQVYDGSKAR-WREGDPPRPVNAYGRTKLAAERAVAAGWPNHAILRSSIIFGPEPPV 181 Query: 158 FLLSMLRL------AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + L L + + D++ +P I R + + E Sbjct: 182 PVGRPLFLQFIDGALAAGKPTTFFNDEWRSPIRVRDILRVCQTLINRQDELQHR------ 235 Query: 212 HMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 + GGP +S A + +A G + + P A PA +D S+L Sbjct: 236 -LFNMGGPDRLSRA---DMAAAVAAACGYDPALILAAPAASVPRPAPSPADISMDSSRLE 291 Query: 270 NTHNIRISTWKEGVRNILVN 289 ++ ++ +R+IL Sbjct: 292 AA----MTPFEAAIRHILGE 307 >gi|281416898|ref|ZP_06247918.1| UDP-glucose 4-epimerase [Clostridium thermocellum JW20] gi|281408300|gb|EFB38558.1| UDP-glucose 4-epimerase [Clostridium thermocellum JW20] gi|316941054|gb|ADU75088.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 1313] Length = 329 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/320 (18%), Positives = 101/320 (31%), Gaps = 59/320 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I ++ + + E+I V R + DL + Sbjct: 1 MAVLVTGGAGYIGSHTVAELVEKKEEVIVVDNLEKGHRDAVAGAKLIVGDLRDKEFVKKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 FL + +I+ AAY V ++ P ++ N + A + ++ ST + Sbjct: 61 FLENDIEAVIHFAAYIEVGESVQNPLKYYNNNVIATLNLLTAMEEAKVDKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E T P N YG++KLA E+ + Y I A Y Sbjct: 121 GEPENIPILETDRTLPTNPYGETKLAVEKALKWCDRAYGIKYIALRYFNASGAHESGEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 S L + +R I + + + TP +A A L Sbjct: 181 EDHSPESHLIPLVIQAALGKRESIKIFGNDYNTPDGTCIRDYIHVSDLANAHYLALQRLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 E +++ ++++ G + + + G KV RP Sbjct: 241 EGKESA---VYNLGNGKGFS-----VKEVIDVVRKVTGRPIKVEDAP--------RRPGD 284 Query: 261 -SCL--DCSKLANTHNIRIS 277 + L K+ N + Sbjct: 285 PAVLVASSEKIKKELNWQPR 304 >gi|134094377|ref|YP_001099452.1| putative dTDP-4-dehydrorhamnose reductase [Herminiimonas arsenicoxydans] gi|133738280|emb|CAL61325.1| putative dTDP-4-dehydrorhamnose reductase [Herminiimonas arsenicoxydans] Length = 284 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 106/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR-----------------PDIDLLKPKD 41 MK LV+G +G + ++ + + D ++ R P D+ Sbjct: 1 MKILVLGASGMLGSAVMRVLSEKKDWQLFGTVRSANAGRFFSPQIAECLLPGCDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F P V+IN D+P +A IN+ +A + G I+ISTD Sbjct: 61 LVKVFDRVKPTVVINCIGLVKQLADADDPLLALPINSLLPHRLAALCNLSGARLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G +E ++ ++YGKSK GE + + LRT+ + + L Sbjct: 121 CVFKGDK-GAYEEKDISDATDLYGKSKFLGEVSL----PQTLTLRTSIIGHELQNAHGLV 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L ++ R C+ + + A+ Q +++ L G++H+ A P+S Sbjct: 176 EWFLEQKDR-----CNGYKRSIFSGLPTVALAQFIRDVVI-PRADLSGLYHVAAK--PIS 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 D I + + + L KL W+ Sbjct: 228 KFDLLALIADVYGKEINILADESVVI------------NRSLSAEKLRQDTGYEAPDWRS 275 Query: 282 GVRNI 286 ++ + Sbjct: 276 LIQLM 280 >gi|23016840|ref|ZP_00056592.1| COG1091: dTDP-4-dehydrorhamnose reductase [Magnetospirillum magnetotacticum MS-1] Length = 292 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 104/297 (35%), Gaps = 19/297 (6%) Query: 2 KCLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPDIDLLKPKDFASFFLS-FSP----DVII 55 K L++G + + + L + + + P +I Sbjct: 3 KLLILGASSSVGRHLWTRLGPDQAIGTYRSHELAGGRRFDSVTQSIAQVIRPGESSHAVI 62 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A D +P+++ +N + + +GI I+ ST++VFDG+ E Sbjct: 63 -LLADPQPDSCVKDPQVSHRLNVVAMTRLVEDLWGLGITPIFASTEFVFDGVK-GDYVET 120 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERR---EI 172 P+ +YG+ K E+ + + + ILR A VY + L +A+ + Sbjct: 121 DEARPILLYGRQKKEVEDFLLASGKPHAILRFAKVYGTEPGDGTLFSAWIAQALGGATAM 180 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWE 232 DQ +P + AI+++A L GI+H++ + + + E Sbjct: 181 RCAADQVFSPVHVGDVGEAILRVAER-------DLGGIYHLSGNQ-RFNRLELLEMTLAA 232 Query: 233 SAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVN 289 RG P V + RP + KL + + ++ + +L Sbjct: 233 LVRRGYPRIAVEPCSIDDFNLPERRPKDVSMRAEKLIAATGMTMMNPEDAIDVLLRK 289 >gi|329926761|ref|ZP_08281169.1| UDP-glucose 4-epimerase [Paenibacillus sp. HGF5] gi|328938961|gb|EGG35329.1| UDP-glucose 4-epimerase [Paenibacillus sp. HGF5] Length = 329 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 111/332 (33%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDI--------------DLLKPKDFASF 45 M LV G G I ++ + Q +++ + + DL Sbjct: 1 MAILVTGGAGYIGSHTVAELLEQGEDVVVIDSLETGHREALLGGKLYVGDLRDKALLKQL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA + V ++ +P + N G + +A + G ++ ST + Sbjct: 61 FSENDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVRKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLL 160 + PI+E T P N+YG++KL E ++ + YV LR S + Sbjct: 121 GEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFNAAGSHASGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 R K+R ISV D + TP T + +A+ + + Sbjct: 181 EDHRPESHLIPLVLQTALKQRASISVFGDDYATPDGTCVRDYIH-VSDLANAHLRAVEYL 239 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV----YRIFTKQYP--TKAHR--- 257 RG +++ +F G +V R+ P +A R Sbjct: 240 RRG---ESSN------------VFNLGNGLGFSVKEVIETSKRVTGADIPVVMEARRAGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K S + + I+ Sbjct: 285 PA--VLVASSDKARTVLGWTPS--RTTLEEII 312 >gi|253999527|ref|YP_003051590.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] gi|253986206|gb|ACT51063.1| UDP-glucose 4-epimerase [Methylovorus sp. SIP3-4] Length = 327 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 96/281 (34%), Gaps = 44/281 (15%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RP--------DIDLLKPKDFASF 45 MK LV+G G I + + + ++I R DL Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGHDVITFDNLSSGYRDAVVGGTFVQADLADKAALEEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F+ +PD +++ A+Y V ++ P+ + N + A G I+ ST VF Sbjct: 61 FVKHAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKHGVNYFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PIDE NPLN YG+SKL E+ + Y Y I Y L Sbjct: 121 GEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSVCLRYFNAAGADPEGQLG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIA----HNLIEN 202 ++ R I+V + TP T I+ + L + Sbjct: 181 ERHEPETHLIPLVLQAISGRRDNITVFGRDYDTPDGTCIRDYIH-IVDLCSAHSLALRKL 239 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 +T++ +++ G + + + + G KV Sbjct: 240 METNISRRYNLGNGAGFS-----VQEVIAAAQKVTGKPIKV 275 >gi|15807714|ref|NP_285368.1| dTDP-4-rhamnose reductase-like protein [Deinococcus radiodurans R1] gi|6460559|gb|AAF12265.1|AE001862_91 dTDP-4-rhamnose reductase-related protein [Deinococcus radiodurans R1] Length = 247 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 27/227 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 K L+ G +G++ L S+ EI+ +++L + PD+I++ AAYT Sbjct: 8 KMLLTGGSGRLGTELRSVIP---EIVAPSSAEMNLTAAAQVLAVVQRERPDIIVHAAAYT 64 Query: 62 AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNP- 120 V AE + E ++ N G +A AA+++G ++ISTDYVF G E P Sbjct: 65 NVGGAEKDREACWNANVVGTRNVAAAANAVGAKLVHISTDYVFSGEEGG-YHESDTPGPV 123 Query: 121 LNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFG 180 +N Y +KL EE + ++ILRT++ F S + ++ Sbjct: 124 VNYYSLTKLVAEEAARAAQ-KHLILRTSFRPREFQYPVAFSDVYTGQD------------ 170 Query: 181 TPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE 227 IA I + +E D + H+ + S + A+ Sbjct: 171 ---YVDIIAPEIALAVKHALEIDDE----VLHIVTE--RKSVYELAK 208 >gi|320104167|ref|YP_004179758.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] gi|319751449|gb|ADV63209.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644] Length = 300 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 114/295 (38%), Gaps = 37/295 (12%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRV-GRPD--------------IDLLKPKD--F 42 M+ L+ G G +L S+ + E++ GR IDL P Sbjct: 1 MRILLTGAAGWFGAFALESLIERGHEVVAWSGRTQGERRFQDRSIVLEPIDLGHPDQERL 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 P+ I++ AA + D A +P+ A +N + + I+ STD Sbjct: 61 VRRLDQVDPEAILHAAAIASADAAFRDPDQAQRVNVQATETLGLWCALRRRRLIFTSTDL 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN---FL 159 VF G P E P P YG++KL E ++A + +R + +Y + S+ F Sbjct: 121 VFGGSG-PPRRETDPAQPSLTYGRTKLEAERRLAQVNPEALSVRLSLMYGLTRSDRLSFF 179 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 +L + R ++ D++ TP A +AR +++ S T G+ H+ Sbjct: 180 DQVLADLAQGRPRALFIDEYRTPAHAPTVARLLVEWLE-----SPTFPSGLVHV-GGPDR 233 Query: 220 VSWADFAEYIFWESAERGGPYSKVYR---IFTKQYPTKAHRPAYSCLDCSKLANT 271 +S D + +A G V I T+ + RPA LD ++L Sbjct: 234 LSRFDL---VRQAAACLGLDPQLVQPSRMIDTR-FNEP--RPADVALDTTRLHAL 282 >gi|308070305|ref|YP_003871910.1| UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] gi|305859584|gb|ADM71372.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Paenibacillus polymyxa E681] Length = 329 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 117/327 (35%), Gaps = 55/327 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 M LV G G I ++ + E++ + + DL + + Sbjct: 1 MAILVTGGAGYIGSHTVAELLDLGEEVVVLDNLQTGHKAALLGGKLYEGDLRDKELLSKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F S D +I+ AA + V ++ P + N G ++ +A G ++ ST + Sbjct: 61 FSENSIDAVIHFAANSLVGESMQNPGKYYDNNVFGTLSLLEAMKDAGVRRIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 + PI+E T P N+YG++KL E ++ + I + Y S + Sbjct: 121 GEPEKVPIEEGDRTEPTNVYGETKLMMERMMSWFDKVLGIKYVSLRYFNAAGAHESGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 R K+R I+V + + TP +A A ++ + L Sbjct: 181 EDHRPESHLIPLVLQTALKQRPHIAVFGEDYATPDGTCVRDYIHVSDLADAHVRAVNYLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 E +D++ +F++ G + + + + G + T+ P +A PA Sbjct: 241 EGNDSN---VFNLGNGQGFS-----VKEVIETARKVTGLE---IPVVTE--PRRAGDPAI 287 Query: 261 SCLDCSKLANTHNIRISTWKEGVRNIL 287 K + + + + +I+ Sbjct: 288 LVASSDKARSVLGWSPA--RTQLEDII 312 >gi|332971740|gb|EGK10688.1| UDP-glucose 4-epimerase [Desmospora sp. 8437] Length = 328 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 113/319 (35%), Gaps = 53/319 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 MK LV G G I + ++ + + V RPD+ D+ + Sbjct: 25 MKVLVTGGAGFIGSHIVDQLLEKGHQAVVVDNLSTGEEEYLRPDLPFYRMDIQD-EGIDR 83 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 PD +I+ AA + V ++ ++P N G + ++ G IY S+ + Sbjct: 84 VIGEEQPDAVIHQAAQSQVTRSIEDPLGDARTNILGTIRLLESCRRHGVAKIIYASSAAI 143 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFL 159 + PIDE P +PL+ YG SK EE + +Y + + I R A VY I Sbjct: 144 YGNPQYLPIDEQHPLSPLSPYGISKGTPEEYIRAYHSLHGLSFTIFRYANVYGIRQVPHG 203 Query: 160 LSML------RLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL ++ I +Q +ARA +A + +T G Sbjct: 204 EGAVISIFIDRLLRDLPLTIHGDGEQTRDYIYVEDVARA--NVAALARGDGETLNLGT-- 259 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 G S D + G +V +RP YS + ++ Sbjct: 260 ----GVNTSLNDL----VKTMEKISGRKLEVNYGP--------NRPGDIKYSYFNIDRVK 303 Query: 270 NTHNI-RISTWKEGVRNIL 287 + N I+ + G+ L Sbjct: 304 SVLNWDPITDLETGLTRTL 322 >gi|261405466|ref|YP_003241707.1| UDP-glucose 4-epimerase [Paenibacillus sp. Y412MC10] gi|261281929|gb|ACX63900.1| UDP-glucose 4-epimerase [Paenibacillus sp. Y412MC10] Length = 329 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 111/332 (33%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDI--------------DLLKPKDFASF 45 M LV G G I ++ + Q +++ + + DL Sbjct: 1 MAILVTGGAGYIGSHTVAELLEQGEDVVVIDSLETGHREALLGGKLYVGDLRDKALLKQL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA + V ++ +P + N G + +A + G ++ ST + Sbjct: 61 FSDNDIDAVIHFAANSLVGESMKDPVKYYDNNVYGTLCLLEAMNEAGVRKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLL 160 + PI+E T P N+YG++KL E ++ + YV LR S + Sbjct: 121 GEPEKVPIEETDRTQPTNVYGETKLMMERMMSWFDTVLGVKYVSLRYFNAAGSHASGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 R K+R ISV D + TP T + +A+ + + Sbjct: 181 EDHRPESHLIPLVLQTALKQRASISVFGDDYATPDGTCVRDYIH-VSDLANAHLRAVEYL 239 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV----YRIFTKQYP--TKAHR--- 257 RG +++ +F G +V R+ P +A R Sbjct: 240 RRG---ESSN------------VFNLGNGLGFSVKEVIETSKRVTGADIPVVMEARRAGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K S + + I+ Sbjct: 285 PA--VLVASSDKARTVLGWTPS--RTTLEEII 312 >gi|253702102|ref|YP_003023291.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] gi|251776952|gb|ACT19533.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. M21] Length = 292 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 105/311 (33%), Gaps = 55/311 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD------------------IDLLKPK 40 MK LV+G G + +L + + D + R +D Sbjct: 1 MKVLVLGATGMLGHTLMTRLSERGDFTVHGTARSREGLDRWFAPQVVERISVGVDADNFD 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 PDV+IN +P I+ INA +A A + G I+IST Sbjct: 61 SILRVLGEVRPDVVINCVGIIKQLPVAKDPVISIGINALFPHRLALACKAAGARLIHIST 120 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VF G R E ++ ++YG+SK GE + + LRT+ + L Sbjct: 121 DCVFRGD-RGGYTEDDQSDAEDLYGRSKFLGELA----DPHCITLRTSIIGHELKGGLGL 175 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L+++ ++ T ++ R + + + L G++ + + P+ Sbjct: 176 IDWFLSQQG-PVNGFTRAIYTGFPTAEMVRILAEFVI-----PNRELHGLYQVASS--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS-----CLDCSKLANTHNIR 275 S D + + Y + I P S L+ ++ A Sbjct: 228 SKYDLLKLV-------AARYDRATPI----------EPQDSFFCDRSLNGARFAAATGYT 270 Query: 276 ISTWKEGVRNI 286 TW E V + Sbjct: 271 APTWPEMVDTM 281 >gi|303241599|ref|ZP_07328098.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] gi|302590819|gb|EFL60568.1| UDP-glucose 4-epimerase [Acetivibrio cellulolyticus CD2] Length = 329 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 104/319 (32%), Gaps = 57/319 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD--------------IDLLKPKDFASF 45 M LV G G I ++ + ++ E+I V + DL + + Sbjct: 1 MAVLVTGGAGYIGSHTVAELLERNEEVIIVDNLEKGHKPAVLGGKLIVGDLRDKEFIKNV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 FL + +I+ AAY V ++ +P ++ N + A G ++ ST + Sbjct: 61 FLQNDIEAVIHFAAYIEVGESVTDPLKYYNNNVAVTLNLLTAMKEAGVKKVVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KL+ E+ + +Y +VILR S + Sbjct: 121 GEPENIPILETDRTFPTNPYGETKLSVEKALKWSDGAYGIKHVILRYFNACGAHISGNIG 180 Query: 161 SML------------RLAKERREISVVCDQFGTP--TSALQIARAI-----IQIAHNLIE 201 +R I + + + TP T +A + Sbjct: 181 EDHSPESHLIPLIIQAAMGKRDSIKMFGNDYNTPDGTCVRDYIHVSDLAQAHYLALQKLR 240 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY- 260 N D S I+++ G + + + G I P RP Sbjct: 241 NEDKSD--IYNLGNGKGFS-----VKEVVDVVRKVTGKS-----ITAVDAP---RRPGDP 285 Query: 261 SCL--DCSKLANTHNIRIS 277 + L K+ N + Sbjct: 286 AILVASSEKIKKELNWKPR 304 >gi|226354957|ref|YP_002784697.1| UDP-glucose 4-epimerase [Deinococcus deserti VCD115] gi|226316947|gb|ACO44943.1| putative UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Deinococcus deserti VCD115] Length = 330 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 112/321 (34%), Gaps = 59/321 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI---------DLLKPKDFAS 44 MK LV+G G I + E++ + R + DLL + + Sbjct: 1 MKLLVVGGAGYIGSHTVRQLRRSGHEVVVLDNLSSGHREALPEDVTLVQQDLLDAEGVKA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYV 103 + PD +I+ AA V ++ P + N G+ + +A ++ IP ++ ST V Sbjct: 61 TLQAHEPDAVIHFAALIEVGESMRAPARYYRNNVVGSLNLLQAIVETRKIPLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFL 159 + PI E +P P ++YG++KL E + ++ + VILR V + Sbjct: 121 YGTTDAVPIPENAPMQPESVYGETKLMTERMIHAFHTAHGLPYVILRYFNVCGAAPEGDI 180 Query: 160 ------------LSMLRLAKERREISVVCDQFGTP--------TSALQIARA---IIQIA 196 L+ L +R ++ + D + TP +A A ++ Sbjct: 181 GEAHANKTHLIELAALTALGQREKMMIFGDDYPTPDGTCIRDYVHVQDLADAHVLAVEAL 240 Query: 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 H+ + T G+ H + + G + + P +A Sbjct: 241 HSGKTQAATYNVGLGHGFSV----------REVLDAVDAVTG-----KPLTRELAPRRAG 285 Query: 257 RPAYSCLDCSKLANTHNIRIS 277 P D +++ + Sbjct: 286 DPPRLVADATRIVKDLGFKPR 306 >gi|297545125|ref|YP_003677427.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842900|gb|ADH61416.1| UDP-glucose 4-epimerase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 329 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 109/329 (33%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I ++++ + E++ V + + DL Sbjct: 1 MAILVCGGAGYIGSHTVAALLNRKEEVVVVDNLVKGHKKSVLGGKLYIGDLRDEAFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA++ V ++ +EP + N G ++ KA ++ ST V+ Sbjct: 61 FKENEIEAVIDFAAFSLVGESVEEPFKYYENNVCGTLSLLKAMKKHNVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI E TNP + YG++KLA E+ + Y I A Y Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALRYFNVAGAIETGEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI-------AHNLIE 201 S + + +R +I + D + PT R I + L + Sbjct: 181 EDHSPETHLIPIILQVALGKRDKIRIYGDDY--PTKDGTCIRDYIHVMDLADAHILALDK 238 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY- 260 + I+++ G + + + + G + I + RP Sbjct: 239 LRKDNESAIYNLGNGEGFS-----VKEVIEVARKVTG-----HPIPAE---VTHRRPGDP 285 Query: 261 SCL--DCSKLANTHNIRISTWKEGVRNIL 287 + L K+ + I+ Sbjct: 286 AVLVASSEKITKELGWTPKY--TSLEEII 312 >gi|307265779|ref|ZP_07547330.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919174|gb|EFN49397.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter wiegelii Rt8.B1] Length = 311 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 110/321 (34%), Gaps = 57/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 MK LV G G I + + +++ V+ + G+ D+ D Sbjct: 1 MKVLVAGGAGFIGSHIGDLLIENGYEIVIVDNLSTGKEKFINKKAIFYKKDITD-DDLYE 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F PD +I+ AA V K+ D +N G I + G IY S+ V Sbjct: 60 IFRKEKPDYVIHQAAQIDVQKSIDNSVFDAKVNVLGTVNILECCRKSGVKKIIYASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSN-- 157 + PIDE NP++ YG SK E Y Y ILR A VY I Sbjct: 120 YGNPEYLPIDEGHKINPISSYGISKHTAEHYFEVYSQLYDLKYTILRYANVYGIRQDPKG 179 Query: 158 -----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + L ER I +Q +A+A + + + Sbjct: 180 EGGVISIFTDKMLKGERPVIFGDGNQTRDFVYVKDVAKANLLALER-------GDNEVVN 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA-----YSCLDCSK 267 ++ + P S + + + + + I+T+ P +S LD K Sbjct: 233 VSTNK-PTSINELVDMMNKIM------NTSLEPIYTE--------PRKGDIMHSYLDNKK 277 Query: 268 LANTHNIRI-STWKEGVRNIL 287 + + + ++G+R + Sbjct: 278 ALDVLGWKPEYSLEDGLRETI 298 >gi|295695529|ref|YP_003588767.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] gi|295411131|gb|ADG05623.1| NAD-dependent epimerase/dehydratase [Bacillus tusciae DSM 2912] Length = 321 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 107/320 (33%), Gaps = 61/320 (19%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEI-----IRVGRPD---------IDLLKPKDFASFF 46 + +V G G I + +C E+ + GR + I + + A F Sbjct: 3 RVMVTGGAGFIGSHVVDRLCEGGYEVAVVDDLSTGRKEQVHPSAVLYIQSVDSESVAHVF 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 +F P+++I+ AA + V ++ +P IN G + G IY S+ V+ Sbjct: 63 EAFRPEIVIHLAAQSNVPRSIQDPLSDTRINVLGTVNVLNQCRDYGVRKVIYASSAAVYG 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN---- 157 IDE P P++ YG SK E V +Y +Y ILR A VY Sbjct: 123 HPQYLAIDEEHPVRPVSFYGISKYTPELYVRTYGELYGLDYTILRFANVYGPRQDPTGEG 182 Query: 158 -FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQI-------AHNLIENSDTSL 207 + + + + D Q +A A + N+ TS+ Sbjct: 183 GVVSIFVDKLLRGEPVIINGDGEQTRDFIYVEDVAAANVAALTLGSGEVLNIGTGCPTSI 242 Query: 208 RGIFH-MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 +++ +++ G A I E+ R +SCL + Sbjct: 243 NELWNTLSSLTGTA-----ARAIHRENRARDI--------------------RHSCLANA 277 Query: 267 KLANTHNIRIS-TWKEGVRN 285 K ++G+ Sbjct: 278 KARRLLEWEPRFALRDGLER 297 >gi|303288449|ref|XP_003063513.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455345|gb|EEH52649.1| predicted protein [Micromonas pusilla CCMP1545] Length = 549 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 68/319 (21%), Positives = 120/319 (37%), Gaps = 42/319 (13%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---------IDLL----KPKDFASFFLS 48 + LV+G +G + ++ +I + + +D+ Sbjct: 213 RALVVGASGNVGGAIEEKYGA-ANVIGTYKNEARTEDGYVYLDIEAVAEDETLAEEIMTM 271 Query: 49 FSPDVIINPAAYTAVDKAEDEPE--IAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P+V+ A + VD E+E E ++NA G +A AA +G +Y STD VF G Sbjct: 272 CRPEVVFICAGFNWVDGCENEAEGLRPRNMNAVGPRNLAVAAKKVGAKVVYFSTDAVFIG 331 Query: 107 LSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTN-NYVILRTAWVYSIFG--SNFLLSM 162 E P N +G++KL GE+ V + +++RTA V+ NF+ M Sbjct: 332 NETGKVYAEADEFLPQNKFGETKLLGEQLVTAVCPERTLVIRTAGVFGPERVGKNFVYRM 391 Query: 163 LRLAKERREISVVCDQFGTPTS-----ALQIARAIIQIAHNLIENSDTSLRGIFHMTADG 217 + +++V D+F + A +A ++ ++ D+ G FH+ + Sbjct: 392 CEAINDADDMAVPTDRFCSHVYNRDLGASHLAPVPVRPPASVKGLVDSDAAGTFHVVGEE 451 Query: 218 GPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT-----------KAHRPAYSCLDCS 266 S +FA+ + + G + I T A RP L Sbjct: 452 SF-SRFNFAQRV---AVTLGFKDTATRVIKRTDLKTMHDQTFEARGFAAERPKNLALAAD 507 Query: 267 KLANTHNIRIS--TWKEGV 283 KL T R+ +E + Sbjct: 508 KLKETLPERMRPKPLREAL 526 >gi|51893853|ref|YP_076544.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] gi|51857542|dbj|BAD41700.1| UDP-glucose 4-epimerase [Symbiobacterium thermophilum IAM 14863] Length = 321 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 45/307 (14%) Query: 1 MK-CLVIGNNGQIAQSLS-SMCVQDVEIIRVG---------------RPDIDLLKPKDFA 43 M+ L+ G G + + + + ++ V +ID+L P+ F Sbjct: 5 MRTVLITGGAGFVGSHVVERFLAEGLRVVVVDNLTTGVREHVPPGAEFHNIDILTPE-FT 63 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S PD I++ AA +V + +P + +N G + +AA +P ++ S+ Sbjct: 64 SLVGKVKPDTIVHLAAQVSVAVSVRDPVLDADVNVGGTLRVLEAAREHQVPNFVFSSSAA 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS-- 156 V+ S P+ E +P +PL+ YG +K+A E + +Y + V++R + V+ Sbjct: 124 VYGIPSSLPVTEDAPFSPLSPYGIAKVAAEGYIRAYCFLHGLKAVVMRYSNVFGPRQKAA 183 Query: 157 ---NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + + + D Q +A A ++ L + S TS + Sbjct: 184 GDGGVVANFVEAILRGHPPVFFGDGGQTRDFIYVKDVADATLKAIDYL-DKSGTSEYLVV 242 Query: 212 HMTA--DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++++ + + + ++ E + I +SCLD K Sbjct: 243 NISSGVETSLRTLYTLLCELVKQAPEPILTPPREGDI------------RHSCLDNRKAR 290 Query: 270 NTHNIRI 276 Sbjct: 291 EYLGWLP 297 >gi|319653274|ref|ZP_08007376.1| LPS biosynthesis like reductase [Bacillus sp. 2_A_57_CT2] gi|317395195|gb|EFV75931.1| LPS biosynthesis like reductase [Bacillus sp. 2_A_57_CT2] Length = 275 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 26/256 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPD-------IDLLKPKDFASFFLSFSP 51 MK LV+G G + + +I R +D+ P Sbjct: 1 MKVLVLGGKGMAGHMIVDYLQRQPQYNVIYTSRNKEDEDGIYLDITDSLKLEDVINKQKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVIIN + AE ++AF +N+ + K A+ I+ISTD VF G Sbjct: 61 DVIINCIGILN-EFAEKNQKLAFQVNSLLPHQLVKFAERYNGKVIHISTDCVFLGTKGN- 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + ++Y +SK GE ++ ++ +RT+ + + + L K++ Sbjct: 119 YSENDIPDGTSVYAESKQLGEI----ISDTHLTIRTSIIGPELKGSGIGLFLWFMKQKGN 174 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA---EY 228 I + + + L++A+AI + I G++H++ D +S + + Sbjct: 175 IKGYKEVYWNGVTTLELAKAIDWMIKQNIT-------GLYHLSCDE-KISKYNLLMLIKE 226 Query: 229 IFWESAERGGPYSKVY 244 IF + P S++ Sbjct: 227 IFNKRDVVIQPDSEIK 242 >gi|253581525|ref|ZP_04858750.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium varium ATCC 27725] gi|251836595|gb|EES65130.1| dTDP-4-dehydrorhamnose reductase [Fusobacterium varium ATCC 27725] Length = 293 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 24/299 (8%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----PD------IDLLKPKDFASFFLSFSP 51 K ++G G + L + + +I+ + + + +DLLK + F P Sbjct: 7 KICILGTEGMLGMELVNNFIYKYKIVGIDKIITKNEKIQFYCLDLLKFEQLEKIFQIERP 66 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 DVIIN AA +D E E+A ++ + + I+ IYISTD +FDG Sbjct: 67 DVIINVAAIVNLDICERNFELAKKLHWDLSRFISDYCQKTECKYIYISTDSIFDGKIGN- 125 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E NP+N Y K+K GE++ + +I + YS ++ L K + Sbjct: 126 YRECDSPNPINNYAKTKYLGEQEALKTPESIIIRTNIYGYSSNQNSLLKWGYDSLKNGIK 185 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFW 231 I + P S Q++ A+ + +GI ++ ++ +S +F I Sbjct: 186 IKGFTNVIFNPVSIKQLSDAVDILLKK-------EFKGIINIGSNL-NLSKYEFLMII-- 235 Query: 232 ESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + +V + + RP + L+ K+ ++G+ +IL + Sbjct: 236 --EKFLQLEQRVEKSELNDNSSFLKRPKITTLNTEKMREILGKE-YKCEDGIYDILKEV 291 >gi|125972710|ref|YP_001036620.1| UDP-galactose 4-epimerase [Clostridium thermocellum ATCC 27405] gi|256004869|ref|ZP_05429843.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 2360] gi|125712935|gb|ABN51427.1| UDP-galactose 4-epimerase [Clostridium thermocellum ATCC 27405] gi|255991179|gb|EEU01287.1| UDP-glucose 4-epimerase [Clostridium thermocellum DSM 2360] Length = 354 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 58/318 (18%), Positives = 100/318 (31%), Gaps = 59/318 (18%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASFFL 47 LV G G I ++ + + E+I V R + DL + FL Sbjct: 28 VLVTGGAGYIGSHTVAELVEKKEEVIVVDNLEKGHRDAVAGAKLIVGDLRDKEFVKKVFL 87 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDG 106 + +I+ AAY V ++ P ++ N + A + ++ ST + Sbjct: 88 ENDIEAVIHFAAYIEVGESVQNPLKYYNNNVIATLNLLTAMEEAKVDKIVFSSTAATYGE 147 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------------- 151 PI E T P N YG++KLA E+ + Y I A Y Sbjct: 148 PENIPILETDRTLPTNPYGETKLAVEKALKWCDRAYGIKYIALRYFNASGAHESGEIGED 207 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 S L + +R I + + + TP +A A L E Sbjct: 208 HSPESHLIPLVIQAALGKRESIKIFGNDYNTPDGTCIRDYIHVSDLANAHYLALQRLREG 267 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 +++ ++++ G + + + G KV RP + Sbjct: 268 KESA---VYNLGNGKGFS-----VKEVIDVVRKVTGRPIKVEDAP--------RRPGDPA 311 Query: 262 CL--DCSKLANTHNIRIS 277 L K+ N + Sbjct: 312 VLVASSEKIKKELNWQPR 329 >gi|322703758|gb|EFY95362.1| NAD dependent epimerase/dehydratase [Metarhizium anisopliae ARSEF 23] Length = 235 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 26/214 (12%) Query: 4 LVIGNNGQIAQSLSSMCVQ----DVEIIRVGRPD-IDLL-------KPKDFASFFLSFSP 51 LV G G + + +++ Q +V+ R D +D+L + + P Sbjct: 10 LVTGATGLLGREITAAFRQSPKWNVKGTGYSRADGVDILKVNLENEDLNELNTVLDETQP 69 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG-LSRT 110 VI++ AA D+ + +P+ A S+N + +A+ A S I IYISTDYVF G Sbjct: 70 HVIVHSAAQRFPDRVDKDPDGARSLNIAASRRLAQVALSRDILLIYISTDYVFPGIPGDA 129 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNN------YVILRTAWVYSIFGSN------- 157 P + + P N+YG++K GE + ++LR +Y + Sbjct: 130 PYEADATPKPTNLYGQTKFDGERAILEEAAKVGKPGSAIVLRVPVLYGHAETPAESAVNV 189 Query: 158 FLLSMLRLAKERREISVVCDQFGTPTSALQIARA 191 + S+ + E I + PT+ I R Sbjct: 190 LMDSVWKAQTEGANIKMDHWAVRYPTNTEDIGRH 223 >gi|170288108|ref|YP_001738346.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|33413324|emb|CAD67949.1| putative dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] gi|170175611|gb|ACB08663.1| dTDP-glucose 4,6-dehydratase [Thermotoga sp. RQ2] Length = 342 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 113/329 (34%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRPDI---------------------DL 36 M LV G G I + ++ D +I+ + + D+ Sbjct: 1 MTILVTGGAGFIGSNFIHYMMEKYPDYKIVCIDKLTYAGNLRNLETVLDKKNFRFIKGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + F PDV+IN AA + VD++ + P+I N G + A+ + Sbjct: 61 CDRELVYRIFEEEKPDVVINFAAESHVDRSIESPDIFLKTNILGTQVLLDASRKYNVKRF 120 Query: 97 Y-ISTDYVFD----GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 + +STD V+ S E SP P + Y SK + + V +Y Y I R Sbjct: 121 HQVSTDEVYGDLPLDRSDLKFTESSPLRPSSPYSASKASADLLVLAYHRTYGVPVTISRC 180 Query: 148 AWVYSIFG--SNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS 203 + Y + + M+ A R + V D AI I H E Sbjct: 181 SNNYGPYQFPEKLIPLMIINALNDRPLPVYGDGRNVRDWIHVKDHCEAIDIIIHRGKEGE 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC- 262 I+++ + + D I E G P S + + RP + Sbjct: 241 ------IYNIGGENERANI-DVVRMILRE---LGKPESLIRFVKD--------RPGHDRR 282 Query: 263 --LDCSKLANTHNIRIS-TWKEGVRNILV 288 LD S++ +++EG+++ + Sbjct: 283 YALDISRMKKEFGWSPKISFEEGLKSTIK 311 >gi|15898580|ref|NP_343185.1| dTDP-4-dehydrorhamnose reductase (rfbD-2) [Sulfolobus solfataricus P2] gi|13815029|gb|AAK41975.1| dTDP-4-dehydrorhamnose reductase (rfbD-2) [Sulfolobus solfataricus P2] Length = 207 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 19/216 (8%) Query: 60 YTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T VDK E E + A+ IN++ I +A + I+ISTDYVFDG E + N Sbjct: 1 MTDVDKCEIEKDKAYKINSQAVKHIVRAGRVVDSYVIHISTDYVFDGNKGN-YKEDNIPN 59 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P+N YG SKL GE +SY + +I+RT+ V+ F + + + KE + + + Sbjct: 60 PINYYGLSKLLGEIFASSY-DESLIIRTSGVF--RNKGFPIYVYKTLKEGKTVLAFK-GY 115 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGP 239 +P SA ++A AI ++ D GI H+ G +S + A I E G Sbjct: 116 YSPISARKLALAIDELL-------DLRKTGIIHVA--GERISRYELAIKI-KEKFNLPGE 165 Query: 240 YSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 +V I + A RP S LD SK I Sbjct: 166 VKEVDEIKS----WIAKRPYDSSLDISKARKLLTID 197 >gi|293572517|ref|ZP_06683496.1| dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] gi|291607434|gb|EFF36777.1| dTDP-4-keto-L-rhamnose reductase [Enterococcus faecium E980] Length = 111 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Query: 4 LVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTA 62 L+ G NGQ+ L + + ++ + D+D+ + ++ PDVI + AAYTA Sbjct: 3 LLTGGNGQLGTELRHLLDEKNLPYVSTDAKDLDITDAEKTMAYITELKPDVIFHCAAYTA 62 Query: 63 VDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 VDKAEDE E+ IN +G +A AA ++ +YISTDYVFDG ++ Sbjct: 63 VDKAEDEAKELDEKINVDGTRNVALAAKAVNAQFVYISTDYVFDGKTK 110 >gi|153954172|ref|YP_001394937.1| hypothetical protein CKL_1547 [Clostridium kluyveri DSM 555] gi|219854781|ref|YP_002471903.1| hypothetical protein CKR_1438 [Clostridium kluyveri NBRC 12016] gi|146347053|gb|EDK33589.1| GalE [Clostridium kluyveri DSM 555] gi|219568505|dbj|BAH06489.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 139 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 106/313 (33%), Gaps = 51/313 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 M LV G G I +++ + + EI+ + DL Sbjct: 1 MSILVCGGAGYIGSHMAAELLERGKEIVVLDNFEKGHKSAVLGGKVYQGDLRDENAVDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ +EP F N G + K+ G+ I + ST + Sbjct: 61 FEENNIESVIDFAAYSLVGESVEEPLKYFENNVVGTLNLLKSMRKYGVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E T P N YG+SKL E+ + Y I A Y S + Sbjct: 121 GEPKNIPIFEDDSTYPTNPYGESKLTVEKLLKWSDRAYGIKYAALRYFNAAGAHISGLIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS--- 203 K+R +I + D + T T + +L+ + Sbjct: 181 EDHNPETHLIPIILQVALKKRDKIFIFGDDYSTEDGTCIRDYVHVMDLANAHLLALNKII 240 Query: 204 DTSLRGIFHMTADGG-------PVSWADFAEYIFWESA-ERGGPYSKVYRIFT---KQYP 252 + GI+++ G VS + I E A R G + ++ Sbjct: 241 EDGKSGIYNLGNGRGFSVKEVIEVSRKVTGQKIKAEIAPRREGDPETLIASSKKAEEELN 300 Query: 253 TKAHRPAYSCLDC 265 K P Y+ L+ Sbjct: 301 WK---PKYNSLET 310 >gi|27597153|dbj|BAC55147.1| UDP-glucose 4-epimerase EpsS [Methylobacillus sp. 12S] Length = 327 Score = 139 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 58/281 (20%), Positives = 96/281 (34%), Gaps = 44/281 (15%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RP--------DIDLLKPKDFASF 45 MK LV+G G I + + + ++I R DL Sbjct: 1 MKVLVVGGAGYIGSHMVKMLLGEGHDVITFDNLSSGYRDAVVGGTFVQADLADKAALDEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F+ +PD +++ A+Y V ++ P+ + N + A G I+ ST VF Sbjct: 61 FVKHTPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKHGVNYFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PIDE NPLN YG+SKL E+ + Y Y I Y L Sbjct: 121 GEPEYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSVCLRYFNAAGADPEGQLG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIA----HNLIEN 202 ++ R I+V + TP T I+ + L + Sbjct: 181 ERHEPETHLIPLVLQAISGRRDNITVFGRDYDTPDGTCIRDYIH-IVDLCSAHSLALRKL 239 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 +T++ +++ G + + + + G KV Sbjct: 240 METNISRRYNLGNGAGFS-----VQEVIAAAQKVTGKPIKV 275 >gi|302389143|ref|YP_003824964.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] gi|302199771|gb|ADL07341.1| UDP-galactose 4-epimerase [Thermosediminibacter oceani DSM 16646] Length = 323 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 113/317 (35%), Gaps = 57/317 (17%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEI-----IRVGRPDI---------DLLKPKDFASFF 46 K V G G I + + + E+ + GR D D+L + Sbjct: 3 KVFVTGGAGYIGSHVVKLLTKKGYEVMVFDNLSTGRRDAVLAGELVEGDILDHEALERAM 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 F PD +++ AA V ++ +P + + N GA + KA G I+ ST V+ Sbjct: 63 DEFRPDAVMHFAAKIVVPESVQKPLLYYENNTCGALNLLKAMRRCGVNKLIFSSTAAVYG 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGS----- 156 +R PI E P NP+N YG+SK A E + A+ YV LR V Sbjct: 123 EPARMPITEDFPLNPVNPYGRSKAAVETVLKDISAAEDFRYVSLRYFNVAGADPEGKIGE 182 Query: 157 ------NFLLSMLRLA-KERREISVVCDQFGTPTSALQIAR---AIIQIAHNLIENSDTS 206 + + +R A +R ++ V + PT R ++ +A I + Sbjct: 183 MKEDATHLITMCVRTACGKRDKLYVYGTDY--PTHDGTCVRDYIHVMDLADAHILALEYL 240 Query: 207 LRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS- 261 L G +F+ G + E+ + G +V +Y A RP Sbjct: 241 LSGGRSEVFNCGYGRGYS-----VREVVDEAKKVTGVNFQV------EY--TARRPGDPP 287 Query: 262 --CLDCSKLANTHNIRI 276 D K+ + Sbjct: 288 ELVADSRKIREKLGWKP 304 >gi|163758302|ref|ZP_02165390.1| carbohydrate oxidoreductase, putative [Hoeflea phototrophica DFL-43] gi|162284591|gb|EDQ34874.1| carbohydrate oxidoreductase, putative [Hoeflea phototrophica DFL-43] Length = 310 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 105/308 (34%), Gaps = 47/308 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD------------------IDLLKPKDF 42 M+ LV+G +G + L ++ R D ID+ Sbjct: 28 MRILVLGGDGMLGHQLLKQLSPRHQVAVTLRQDKSSYDSYGLFTEDNSFFGIDVRSIDRV 87 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + F PD +IN + + ++ INA +A G +++STD Sbjct: 88 SEVMAQFQPDAVINCVGIIKQRPSAKQSILSLEINALLPHRLAVLCRVAGARLVHMSTDC 147 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF G E ++ ++YG+SK GE + LRT+ + L Sbjct: 148 VFSGRKGN-YLESDVSDAEDLYGRSKFLGEVD----DEGCITLRTSIIGHELSRKSSLLE 202 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 LA+ R + + + + +++AR I + N T G+F ++++ P+ Sbjct: 203 WVLAQ-RGTVKGFQNAIFSGFTTIEMARIIETVLTNR-----TEAHGMFQVSSE--PIDK 254 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + + P KV K R LD ++ + +W Sbjct: 255 H----ALLLLIKQHLHPSIKVVPDTA----LKIDR----SLDSTRFRDCFGYTPPSW--- 299 Query: 283 VRNILVNI 290 ++ + Sbjct: 300 -PEMIAEL 306 >gi|229586599|ref|YP_002845100.1| dTDP-4-dehydrorhamnose reductase [Rickettsia africae ESF-5] gi|228021649|gb|ACP53357.1| dTDP-4-dehydrorhamnose reductase [Rickettsia africae ESF-5] Length = 284 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 104/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKKFDIFATARNNSARSYFSKDLSDKLITNVDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFSDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + LRG++H+ + P++ Sbjct: 176 NWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELRGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + AE + I + + LD ++ W+E Sbjct: 228 KLEL----LKLVAEIYNKNIDI--ISSDELVV------DRSLDSTRFNEVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|145590601|ref|YP_001152603.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] gi|145282369|gb|ABP49951.1| NAD-dependent epimerase/dehydratase [Pyrobaculum arsenaticum DSM 13514] Length = 299 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 64/309 (20%), Positives = 120/309 (38%), Gaps = 43/309 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD----IDLLKPKDFASFFLSFS----P 51 MK +V G G I +++ + +++ V + + L+ P Sbjct: 1 MKIVVTGGAGFIGSHVAAHLKSRGFDVVAVDSLERASGLGRLRAAGVPLVVADLRRDELP 60 Query: 52 --DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 D +++ AAY +V+++ ++P NA + K A +G +Y+S+ V+ Sbjct: 61 RGDAVVHAAAYISVEESWEKPYEYMWNNAAVTAKVGKEALRMGAYLVYLSSAAVYGNPVY 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF-------GSNFLLSM 162 TPIDE PT P + YG SKLAGEE +A + + A +++++ + + Sbjct: 121 TPIDEEHPTRPTSPYGLSKLAGEEALALLQSAGLKYAVARLFNVYGPGQTGPYAGVITKF 180 Query: 163 LRLAKER--REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 + A+ I +Q L +AR + + + G+F++ G V Sbjct: 181 IERARAGLPPVIFGSGEQTRDFIHVLDVARFVETLVEKGAQ-------GVFNV-GTGRAV 232 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLANTHNIRIS 277 S + A + + G I+ RP A+S + K Sbjct: 233 SIKELAHAVMKLAGIGG------EPIYAS------PRPGDIAHSVANIKKARGLGWEPKI 280 Query: 278 TWKEGVRNI 286 T +EG+ + Sbjct: 281 TLEEGLAQL 289 >gi|119182893|ref|XP_001242546.1| hypothetical protein CIMG_06442 [Coccidioides immitis RS] Length = 332 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 83/337 (24%), Positives = 128/337 (37%), Gaps = 62/337 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGR-------PDI---DLLKPKDFASFFLSFSP 51 K LV G +G + + + + +DV VG+ PDI DL P + S P Sbjct: 4 KALVTGASGLLGRQVLNAFKKDVNWEAVGQGFTRAAPPDIVKADLTNPSEIESLLDEVKP 63 Query: 52 DVIINP--------------AA-----YTAVD-KAEDEPEIAFSINAEGAGAIAKAADSI 91 V+++ A ++++ + P F I A+AKA Sbjct: 64 QVVVHCESSLFIPMVLFVSEAGRNSSMISSIETRCNQAPPTDFQI---TTKALAKATLQR 120 Query: 92 GIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRT 147 I IYISTDYVF G P + S T P NIYG++KL GE V T V+LR Sbjct: 121 SILLIYISTDYVFPGRPGEAPYETSSQTEPPNIYGQTKLDGEIAVIETTQGSGKGVVLRV 180 Query: 148 AWVYSIFGS------NFLLSMLRLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLI 200 +Y + N L+ + A++ ++ + PT+ + R IA + Sbjct: 181 PVLYGSADTNSESAVNVLIDAVWKAQDADAKVKMDDWGQRYPTNTEDVGRVCHDIAVKYL 240 Query: 201 --ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK---A 255 + S I +++ V+ + E + G P S + RI KQ T Sbjct: 241 GEQERAASFPTILQFSSED-KVTKYEMCE---RFAEILGLPLSGMERI--KQGGTPGNGV 294 Query: 256 HRPAYSCLDCSKLANTHNIRIST------WKEGVRNI 286 RP + L L I + T W+ +R Sbjct: 295 QRPFDTHLSTKALKE-LGIPVDTQDFVSWWRRELRAY 330 >gi|310779467|ref|YP_003967800.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309748790|gb|ADO83452.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 329 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 110/319 (34%), Gaps = 54/319 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV G G I +++ + + E++ + R + +L K Sbjct: 1 MTILVCGGAGYIGSHAVARLVEKGEEVVVLDNLYTGHRDAVPEGVKLCIGNLADEKFMDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AAY+ V ++ ++P + N G+ + K G ++ ST Sbjct: 61 VFQENKIDAVMHFAAYSLVGESVEKPLKYYENNVYGSLCLLKTMKKFGVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + PI E T P N YG+SKLA E+ + +Y N+++LR V S + Sbjct: 121 YGEPENIPILETDKTEPTNPYGESKLAVEKMLKWCEKAYGINHIVLRYFNVAGAHESGRI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 +R +I + + + T + + A I L Sbjct: 181 GEDHSPETHLIPLVLQVALGKREKIFMYGEDYDTHDGTCIRDYIHVMDLVDAHILAIEKL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 N +S I+++ G + + S + G + I + P +A PA Sbjct: 241 KNNGKSS---IYNLGNGNGFT-----VKEVIETSRKVTG-----HPIPAEVAPRRAGDPA 287 Query: 260 YSCLDCSKLANTHNIRIST 278 K + Sbjct: 288 KLVASSEKAMKELGWKPEH 306 >gi|17547871|ref|NP_521273.1| hypothetical protein RSc3152 [Ralstonia solanacearum GMI1000] gi|17430177|emb|CAD16940.1| probable nad-dependent epimerase/dehydratase;dtdp-4-dehydrorhamnose reductase; oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 276 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 94/249 (37%), Gaps = 33/249 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------IDLLKPKDFASFFLSFSPD 52 M L+ G G + LS +++R R D +D+ + PD Sbjct: 1 MNVLITGARGYLGALLSVALSGSHDVVRTSRGDISNSLFQYLDVTDADCVKRVVAATVPD 60 Query: 53 VIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPI 112 VII+ AA + E PE AF +NAEG + +AA+ +G ++IST Sbjct: 61 VIIHAAAMANLSVCEANPEAAFLVNAEGTLNVVQAANEVGARVLFIST------------ 108 Query: 113 DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE---R 169 + +NP +YG+SK A EE V + I++ + + + + E Sbjct: 109 --LAASNPSIVYGRSKSAAEEHVKHVRMGHEIVQLSMTFGLSPNRASRRPFNKMLESFQT 166 Query: 170 REISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 + + + + PT + + Q+ E + +T D + D A Sbjct: 167 GKPRIYDNAWLFQPTCTEHVIAIVRQLLCRPFEGRRLA------VTVDK-RCTMYDIAND 219 Query: 229 IFWESAERG 237 + + +G Sbjct: 220 LLGPALVKG 228 >gi|310780550|ref|YP_003968882.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] gi|309749873|gb|ADO84534.1| UDP-galactose 4-epimerase [Ilyobacter polytropus DSM 2926] Length = 323 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 105/317 (33%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI----------DLLKPKDFAS 44 M+ LV G G I ++ + E+I G ++ DL + + + Sbjct: 1 MRVLVTGGAGYIGSHAVVELLDGGYEVIILDNLETGHIELVDSRAKFYKADLREKESLRN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 F DV++N AAY V ++ EP + N G + + + I S+ Sbjct: 61 VFKKEKIDVVMNFAAYIKVGESVTEPNKYYENNTGGVLNLLEIMKEFNVKNIVFSSTAAV 120 Query: 105 DGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNF 158 G + E + P+N YG SK EE + +Y NYVI R V Sbjct: 121 YGEVSGDDLVSESFDSQPINPYGMSKFMAEEIIKDSASAYNMNYVIFRYFNVAGAHEKYH 180 Query: 159 LLSM-----------LRLAK-ERREISVVCDQFGT--PTSALQIARA--IIQIAHNLIEN 202 + + L AK ER ++ V D + T T + + I Sbjct: 181 IGQIGEGMTSLIPVVLEAAKGERDKVEVFGDTYSTKDGTGVRDFIHVTDLARAHVMAINK 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-- 260 G+F++ G S + I + G ++ + ++ RP Sbjct: 241 LKKEESGLFNLGNGNGF-SVFE----ILDAARRVTGK--EIPAVISE------KRPGDPA 287 Query: 261 SCLDCS-KLANTHNIRI 276 + CS K Sbjct: 288 CVVACSEKANEDLGWEP 304 >gi|302872024|ref|YP_003840660.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302574883|gb|ADL42674.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 305 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 64/307 (20%), Positives = 107/307 (34%), Gaps = 53/307 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIERGYDVCIVDNLLSGNAHNINPKAKFYKLDIRD--NLEQ 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + + I+ S+ V Sbjct: 59 VFEKNKIEYCIHQAAQVSVAKSMEDVWLDCSINVLGTVNLLEYCVKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNF- 158 + PIDE P P + YG SKL EE V + +N YVI R + VY F Sbjct: 119 YGEPKYIPIDENHPLRPESFYGLSKLTSEEYVRMFAHNFNFEYVIFRYSNVYGPRQDPFG 178 Query: 159 ----LLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + +++ + D Q +A A ++S+ G F+ Sbjct: 179 EGGVVSIFCKRMQNNKDVVIFGDGTQTRDFIYVEDVAEANCIAL-------ESSVSGTFN 231 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 ++ VS + E I G K ++ RP A+SCL + L Sbjct: 232 LS-TAKNVSVNELFEII------SGLTGYKRVPVYQS------KRPGDIAHSCLSNNLLK 278 Query: 270 NTHNIRI 276 N Sbjct: 279 NVFGFSP 285 >gi|196230014|ref|ZP_03128877.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] gi|196225611|gb|EDY20118.1| UDP-glucose 4-epimerase [Chthoniobacter flavus Ellin428] Length = 323 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 107/312 (34%), Gaps = 50/312 (16%) Query: 1 MKCLVIGNNGQIAQ-SLSSMCVQDVEIIRVG------------RPDI---DLLKPKDFAS 44 MK V G G I + + ++ R ++ DL K D Sbjct: 1 MKIFVTGGAGYIGSICVEQLLEAGHQVTVFDNLTEGHRKAVDSRAELIIGDLQKECDIHD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 PD +++ AA V ++ + P F N G + A ++G ++ ST Sbjct: 61 AMEHARPDAVMHFAANALVGESMENPSKYFRNNVYGGLNLLDAMVAVGVKKFVFSSTCAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 F R PIDE P P+N YG+SKL E+ + Y + + A Y Sbjct: 121 FGPPDRLPIDETLPQRPINPYGESKLMFEKILRWYDEIHGLKFVALRYFNAAGATERFGE 180 Query: 152 -SIFGSNFLLSMLRLA-KERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSL 207 ++ + ++L++A +R + + + TP T I+ +A + T Sbjct: 181 DHRIETHLIPNVLKVALGQRENVQIFGTDYETPDGTCIRDYIH-IVDLAQAHMLALGTKE 239 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL--D 264 +++ GG S I + G V KA RP + L Sbjct: 240 SAFYNL-GTGGGTS----VREIIATCEKVTGKKIPVVE--------KARRPGDPARLIAG 286 Query: 265 CSKLANTHNIRI 276 K+ + Sbjct: 287 SDKVQRELGWKP 298 >gi|332157986|ref|YP_004423265.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2] gi|331033449|gb|AEC51261.1| UDP-glucose 4-epimerase [Pyrococcus sp. NA2] Length = 306 Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 106/316 (33%), Gaps = 51/316 (16%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEIIRVG---------------RPDIDLLKPKDF 42 M+ ++ G G I L+ +D +++ + + D+ + Sbjct: 1 MRNKLVVITGGAGFIGSHLAEALAEDNDVVVIDNLYSGKLENIPENVKFVEADVRDYEKI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V+++ +P +N G + +A I+ S+ Sbjct: 61 ADIIREA--DYVFHEAAQISVEESIRDPVFTEEVNVIGTINVLRALAEGEGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 V+ PI E S P++ YG +KL GE Y Y V+LR VY S+ Sbjct: 119 VYGDPIELPIKEDSELRPISPYGITKLTGEHYCRVYYELYGVPIVVLRYFNVYGPRQSSA 178 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + A + + D Q + A + +A N + Sbjct: 179 YAGVISIFMERAIRGEPLIIYGDGKQTRDFIFVKDVVDANLLVAKKERANGEVFN----- 233 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 A G D A + S+ S++ YP RP S D K+ Sbjct: 234 -VATGRETMIIDLALKVIELSS----SPSQII-----FYP---PRPGDIKRSVADIGKIR 280 Query: 270 NTHNIRISTWKEGVRN 285 + +EG++ Sbjct: 281 KLGFKPKYSLEEGLKE 296 >gi|91205525|ref|YP_537880.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii RML369-C] gi|91069069|gb|ABE04791.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii RML369-C] Length = 284 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 109/305 (35%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ +D+++ R P++D+ Sbjct: 1 MKILILGATGMLGNSMVRFLSTDKDLDVYATSRSSSAHSYFSKDLANKIVPNVDVENYDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 P+++IN ++P A IN+ +A + +G I+ISTD Sbjct: 61 LVEVLNKIKPNIVINCIGLVKQLADANDPLKALPINSLLPHRLAGLCELVGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YG+SK GE + + LRT+ + N L+ Sbjct: 121 CVFSGKKGN-YKESDFPDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELSGNRSLT 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSSEG-SVKGFEKAIYSGFPTVELARIIKNFVL-----PNKKLHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + I + K+ I + + LD + WKE Sbjct: 228 KLELLKLIAEIYNK------KIDIIPSDELV------IDRSLDATHFNEITGYNPPEWKE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|256752410|ref|ZP_05493269.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] gi|256748679|gb|EEU61724.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacter ethanolicus CCSD1] Length = 316 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 119/323 (36%), Gaps = 61/323 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII-----RVGRPDI----------DLLKPKDFAS 44 MK L+ G G I +++ + +++ E++ G+ + D+ D Sbjct: 1 MKVLITGGAGFIGSNIADLLIENGYEVVIVDNLSTGKHEFINKKAVFYNKDITD-NDLYE 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F PD +I+ AA + K+ EP +N G + + + S IY S+ V Sbjct: 60 VFEKEKPDYVIHQAAQIDIQKSIKEPVFDAKVNILGTVNLLECSKSYKVKKIIYASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + IDE +P++ YG SK E Y Y ILR A VY I Sbjct: 120 YGDPEYLAIDEKHKVDPISYYGISKHTPEHYFEVYRQLYGLKYTILRYANVYGIRQDPKG 179 Query: 158 -------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 F+ +L+ ER I +Q +A+A + +E D I Sbjct: 180 EGGVISIFVDKILK--DERPIIFGDGNQTRDFVYVKDVAKANL----LALEKGDNE---I 230 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA-----YSCLDC 265 +++ + P S + I + G + + I+ + P +S LD Sbjct: 231 VNISTNK-PTSINEL---IDLMNKIMG---TSLKPIYAE--------PRKGDIVHSYLDN 275 Query: 266 SKLANTHNIRI-STWKEGVRNIL 287 K + + + +EG+R + Sbjct: 276 KKALDVLGWKPEYSLEEGLRETI 298 >gi|238763334|ref|ZP_04624298.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC 33638] gi|238698433|gb|EEP91186.1| hypothetical protein ykris0001_2900 [Yersinia kristensenii ATCC 33638] Length = 293 Score = 138 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 109/311 (35%), Gaps = 51/311 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRP-----------------DIDLLKPKD 41 M L++G G + SL + + + +I R ++D Sbjct: 1 MNVLILGATGMLGYSLFANLNEYKQLNVIGTARSMAGKEIYFNKLQENLLLNVDATDIDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 + PDV+IN + + A IN+ +A D I+ STD Sbjct: 61 IDNAIKLAKPDVVINCIGLIKQHEIAKQYVPAIKINSLLPHQLAALCDKYEAKYIHFSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VFDG + +E N +IYGKSK GE ++ LRT+ + S L Sbjct: 121 CVFDGKTGL-YNELDLPNSTDIYGKSKYLGE----VNYGRHLTLRTSIIGHELSSAVSLI 175 Query: 162 MLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD-GG 218 L K++ E++ + PTS I ++ I D SL G++H++ D Sbjct: 176 DWFL-KQQNEVNGFSKAIFSGLPTSY------IAKLLAEKI-LVDNSLTGLYHLSVDPID 227 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 S I+ S + V LD KL + N T Sbjct: 228 KFSLISLVSEIYGHSVKINKSEQLVI---------------DRSLDSKKLRDAINFNPPT 272 Query: 279 WKEGVRNILVN 289 W+E + + N Sbjct: 273 WRE-LIEFMHN 282 >gi|311693524|gb|ADP96397.1| dTDP-4-dehydrorhamnose reductase-like protein [marine bacterium HP15] Length = 277 Score = 138 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 105/276 (38%), Gaps = 15/276 (5%) Query: 16 LSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFS 75 L + + + + D ++ + D+I+N + AE++PE Sbjct: 2 LERLRATHLHVSPLLVSDPSNADLDALENWIPEDT-DLIVNALWMADPEVAENDPEGVHM 60 Query: 76 INAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV 135 A+A+ A G+ + +S+ YVFDG ++ +P P+N G + E+ + Sbjct: 61 AAFSLPVAMAEFARDRGMALLQLSSCYVFDGRKQSGYITSNPGQPVNELGNWQWECEQAL 120 Query: 136 ASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 + ++ILRT W + F+ + +S+ G P S +AR I + Sbjct: 121 RTLLPRHIILRTGW----SLARFIRKVQASTAAGEILSLPGRCRGQPVSVRDLARVIEAV 176 Query: 196 AHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TK 254 L + + G + ++ + I A G + + + P Sbjct: 177 VLQL--DCGAEVWGTYQYAG-AEEINLYELGLAI----AGLPGIPEGIRVV--DEVPEWG 227 Query: 255 AHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 P + L C+K+ NT I+ W+ G+ + L + Sbjct: 228 HLEPVNTTLICTKIRNTFGIKQMPWRSGLVDELTML 263 >gi|218670903|ref|ZP_03520574.1| dTDP-4-dehydrorhamnose reductase protein [Rhizobium etli GR56] Length = 121 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESA 234 V DQ G PTSAL IA A++ IA ++ ++D SLRG FH+T G SWADFAE IF Sbjct: 2 VADQTGCPTSALDIADAVLAIATRVVADADPSLRGTFHLTG-SGEASWADFAEEIFAALL 60 Query: 235 ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 + GG V RI T YPT A RPA S L+ KLA T+ IR+ WK+ + ++ ++ Sbjct: 61 KSGGRNVGVERIPTTDYPTPAKRPANSRLNGDKLARTYGIRLPEWKQSMTIVMQDL 116 >gi|325295553|ref|YP_004282067.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066001|gb|ADY74008.1| UDP-glucose 4-epimerase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 327 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 106/320 (33%), Gaps = 61/320 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG-----RPDI---------DLLKPKDFASF 45 MK LV G G I + + +++ V + DL Sbjct: 1 MKILVTGGAGYIGSHVVKALGEKGYKVLVVDNLSKGHKEAVLYGKLVVADLEDKNTLDVI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F F PD +++ AA+ V ++ EP + N + + G I+ ST V+ Sbjct: 61 FKEFRPDAVMHFAAFIEVAQSLREPLKYYKNNTVNTINLLEVMLKNGVNKFIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------S 152 + PI E P P+N YG+SK E+ + + +Y + + Y Sbjct: 121 GNPEKVPIPEIEPIKPINPYGQSKAFVEKVLQDFDKSYGLKYVSLRYFNAAGADPEGRIG 180 Query: 153 IFGS---NFLLSMLRLAK-ERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + + +L+ AK E+ I + + TP +A A I L+ Sbjct: 181 ESHDPETHLIPLILKTAKGEKESIKIFGTDYPTPDGTCIRDYIHVDDLAEAHILALEYLL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADF-AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + + G F + + + G KV T+ RP Sbjct: 241 NGGSSEV-----FNCGYG----HGFSVREVIDTARKVTGIDFKVEE--TE------RRPG 283 Query: 260 Y-SCL--DCSKLANTHNIRI 276 + L D SKL + + Sbjct: 284 DPAILVADSSKLRKVLDWKP 303 >gi|121997562|ref|YP_001002349.1| UDP-glucose 4-epimerase [Halorhodospira halophila SL1] gi|121588967|gb|ABM61547.1| UDP-galactose 4-epimerase [Halorhodospira halophila SL1] Length = 329 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 68/330 (20%), Positives = 112/330 (33%), Gaps = 57/330 (17%) Query: 1 MKCLVIGNNGQIAQSL-SSMCVQDVEIIRVG---------RPDI-----DLLKPKDFASF 45 M LV G G I + + E++ + P+ DL ++ Sbjct: 1 MTILVTGGAGYIGSHMVRRLLADGYEVVALDNLSTGHRWAVPEECLEVGDLQDRDALSTL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +++ AA + V ++E+ P N G + +A +G I+ S+ V+ Sbjct: 61 FQRYRFSAVVHFAASSLVGESEERPLEYHENNVGGTLNLLRACLELGTTRLIFSSSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLL 160 S +PI E P+N YG SK+ E +A + +V LR L Sbjct: 121 GAPSESPIPESVAPAPINPYGVSKMVCERMLADVSVGTSLRFVSLRYFNAAGADPKGRLG 180 Query: 161 SML--------RLAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 RL + ++ D + PT R I + +L+E +L Sbjct: 181 ECHEPETHLIPRLLQVVSGRSAGFTLYGDDY--PTPDGTCIRDYIHV-EDLVEAHVIALA 237 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK--QYPTKA----HRPAY-S 261 H+ A G + F RG +V + +P RP S Sbjct: 238 ---HLEAGGESRT--------FNCGYGRGYSVREVIEVARAVTGHPLPVDVGPRRPGDPS 286 Query: 262 CL--DCSKLANTHNIRISTWKEGVRNILVN 289 L D S L T R E + I+ + Sbjct: 287 QLVADGSALRETLGWRPRY--ESLETIVRD 314 >gi|304316399|ref|YP_003851544.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777901|gb|ADL68460.1| NAD-dependent epimerase/dehydratase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 319 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 57/322 (17%), Positives = 109/322 (33%), Gaps = 59/322 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEII-----RVGRPD----------IDLLKPKDFAS 44 M LV G G I ++ + + + ++I G+ + +D+ D Sbjct: 1 MNILVTGGAGFIGSNIVDLLIDNGYDVIVVDNMSTGKKENINKKARFYNVDITD-NDLYK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +I+ AA + ++ ++P +N G + + +Y S+ V Sbjct: 60 VFEDEKIDYVIHHAAQIDIQRSINDPVFDAKVNIIGTINLLECCRKFDVKKIVYASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + +DE NP++ YG SK E + Y Y ILR A VY I Sbjct: 120 YGDPEYLGVDEKHRVNPISYYGISKHTPEHYIKVYNELYGLKYTILRYANVYGIRQDPKG 179 Query: 158 -----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + L+ + I +Q +A+A + +EN D I + Sbjct: 180 EGGVISIFIDKMLSGKNPVIFGDGNQTRDFIYVKDVAKANL----LALENGDNE---IIN 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGP-YSKVYRIFTKQYPTKAHRPA-----YSCLDCS 266 ++ + A I + + I+ + P +S LD Sbjct: 233 ISTNK--------ATTINELVNIMNKIMNASLKPIYAE--------PRKGDIVHSYLDNK 276 Query: 267 KLANTHNIRIST-WKEGVRNIL 287 K + + ++G++ + Sbjct: 277 KAKDVLGWKPDYELEDGLKETV 298 >gi|157964413|ref|YP_001499237.1| dTDP-4-dehydrorhamnose reductase [Rickettsia massiliae MTU5] gi|157844189|gb|ABV84690.1| dTDP-4-dehydrorhamnose reductase [Rickettsia massiliae MTU5] Length = 288 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 53/305 (17%), Positives = 105/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ + +I R ++D+ Sbjct: 5 MKILILGVTGMLGNSIFRFLSSNKKFDIFATARNNSARSYFSKDLSDKLITNVDVEHHDS 64 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 PD++IN ++P A IN+ +A + I+ISTD Sbjct: 65 LVEVLNQTKPDIVINCIGIVKQLADSNDPLKALPINSLLPHRLANLCKLVNSRLIHISTD 124 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SK GE + + LRT+ + N L Sbjct: 125 CVFSGTKGN-YKESDFSDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 179 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 180 NWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 231 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + + + ++ I + + LD ++ W+E Sbjct: 232 KLELLKLVAEIYNK------EIDIIPSDELV------INRSLDSTRFNEVTGYTPPEWRE 279 Query: 282 GVRNI 286 V+ + Sbjct: 280 LVKRM 284 >gi|330834786|ref|YP_004409514.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] gi|329566925|gb|AEB95030.1| NAD-dependent epimerase/dehydratase protein [Metallosphaera cuprina Ar-4] Length = 309 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 115/305 (37%), Gaps = 42/305 (13%) Query: 3 CLVIGNNGQIAQSLSSMC--------------VQDVEIIRVGRPDIDLLKPKDFASFFLS 48 LV G G I + + +++++ + D+ + Sbjct: 2 ILVTGGAGFIGSAFVRVVDNPVVYDALTYSGRLENLQGVPHTFIKGDIRDKEKLEKAIKD 61 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +S DVI+N AA + VD++ +P AF +N EG + I +++STD V+ + Sbjct: 62 YSIDVIVNFAAESHVDRSISDPG-AFLVNVEGVVNLLNICRKYKIKLVHVSTDEVYGEME 120 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 + +E SP NP + Y SK +G+ V +Y + +I+R + Y L Sbjct: 121 DS--NEDSPLNPSSPYAASKASGDLFIKAYVRTYGVDAIIIRPSNNYGPRQHPEKLIPKT 178 Query: 165 LAKE--RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 + + EI + D G+ ++I +L++N + I+++ + + Sbjct: 179 IIRTLLGLEIPIYGD--GSQVRDWIYVEDTVKIIKDLMKNGKSGE--IYNIPGNTHITN- 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 + + KV + RP + L K ++ +EG Sbjct: 234 ----LELVKLIGKIMSKEVKVRFVKD--------RPGHDRLYSMKSK--LKYEVTPLEEG 279 Query: 283 VRNIL 287 +R + Sbjct: 280 LRKTV 284 >gi|256376132|ref|YP_003099792.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] gi|255920435|gb|ACU35946.1| dTDP-4-dehydrorhamnose reductase [Actinosynnema mirum DSM 43827] Length = 302 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 35/287 (12%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRP-------------DIDLLKPKDFASFF 46 M+ LVIG +G + +++ + V+ + R ++D+ + Sbjct: 9 MRVLVIG-SGYLGGAVAGRLRAGGVDAVVCSRRRPGAASAGGAPWRELDVRDGRACRELV 67 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 +P+ ++ + + E PE+A +A GA IA A + G + ISTD VFDG Sbjct: 68 AELAPEGVVVVHGPSDITWCEANPELAREAHAGGARNIADAVE--GRHVVLISTDNVFDG 125 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS----IFGSNFLLSM 162 + E P +P N YG +KLA E + + LR + V+ NF + Sbjct: 126 TRASS-GESDPVSPANAYGAAKLAAERTFLE-RGSALALRVSLVHGWDPDGLRPNFATTC 183 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 +R ++ RE+ V D + TP ++ ++ + G+ H+ +S Sbjct: 184 VRALRDGRELDVPEDHWNTPVHVDDVSAWVVALM-------GARRTGVLHL-GGPDRLSR 235 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++A I + +G + + A RP +CL + A Sbjct: 236 LEWARRI---ADAQGLDAGLLRPVRRAD-SAYACRPENACLHSERAA 278 >gi|320335331|ref|YP_004172042.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] gi|319756620|gb|ADV68377.1| UDP-glucose 4-epimerase [Deinococcus maricopensis DSM 21211] Length = 329 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 89/251 (35%), Gaps = 41/251 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + + + +DLL Sbjct: 1 MNLLVTGGAGYIGSHTVRALQRAGYTVTVLDNLSSGHAEALPDGATLAQVDLLDYSAVKD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYV 103 PD I++ AA V ++ EP + N G+ + +A A+++ P ++ ST V Sbjct: 61 TLARVRPDAIVHFAALIEVGESMKEPARYYRNNVTGSLNLLQANAETVKAPIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + TPI E +P P ++YG++KL E + ++ ++ LR V + Sbjct: 121 YGDAQSTPIPEDAPKAPTSVYGETKLMTEHMLNAFDRAHGIRHIKLRYFNVCGAQPGGQI 180 Query: 160 LSM------------LRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L +R ++ + + + TP +A A + L Sbjct: 181 GEDHPNKTHLIELALLTALGQREKMMIFGEDYPTPDGTCIRDYIHVADLADAHVLAVKAL 240 Query: 200 IENSDTSLRGI 210 ++ + ++ + Sbjct: 241 LDGAPSNAYNV 251 >gi|257052080|ref|YP_003129913.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690843|gb|ACV11180.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 306 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 108/315 (34%), Gaps = 47/315 (14%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFASFFL 47 L+ G G I L+ V+ ++I + R ++ D+ A Sbjct: 11 VLITGGAGFIGSHLADALVEHNDVIVLDNLSTGKRENVPDGATFVEGDVRDADVVADVSD 70 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D+I + AA +V+++ DEP + +N +G + +AA + ++ S+ ++ Sbjct: 71 GV--DLIFHKAAVVSVERSIDEPAFSHEVNFDGTLTLLEAARRVDARVVFASSAAIYGDP 128 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF-----GSNF 158 PI E P +P + YG K A ++ + +Y + Y V LR Y S Sbjct: 129 DTLPITESDPVDPQSPYGIDKCAADQYLRAYHDLYGLETVALRYFNAYGPRQTASDYSGV 188 Query: 159 LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGG 218 + A+ I+V D T + NL+ + T G + GG Sbjct: 189 ISIFGEQARAGEPITVNGDG----TQTRDFVHVSDVVTANLLAAT-TEHVGTAYNIGTGG 243 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLANTHNIR 275 S AE I A G V+ RP S D + Sbjct: 244 ETSIRSLAETI---QATVGTDSPIVH---------GDPRPGDIQRSRADITTARERLGYE 291 Query: 276 IS-TWKEGVRNILVN 289 S + G+ + Sbjct: 292 PSVPLETGLATLFDQ 306 >gi|284164514|ref|YP_003402793.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] gi|284014169|gb|ADB60120.1| NAD-dependent epimerase/dehydratase [Haloterrigena turkmenica DSM 5511] Length = 322 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 51/308 (16%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIR--------------VGRPDIDLLKPKDFASF 45 V G G I + + +++ V +D+ + Sbjct: 9 IAVTGGAGFIGSRVIDRLQAEHPEWDVVALDNQYRGQVSSVGDVDIQHVDIRDRRALEET 68 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 DV+++ AA + VD + ++A+ +N +G +A G ++ + Sbjct: 69 LEGA--DVVLHLAALSGVDDCDSNRDLAYEVNVQGTNNVAWFCRQTGAGLVFPFSMASIG 126 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRT---AWVYSIF-------- 154 PI P +P+N YG++K+ GE V + + +Y Sbjct: 127 DPQSFPITVDHPRDPMNWYGRTKVLGERAVETLAEGAFPAHMYMKSNLYGEHEVDGTTVS 186 Query: 155 GSNFLLSMLRLAKERREISVVC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI-- 210 + + A ++V Q +ARA ++ L+ + G+ Sbjct: 187 KPTVINFFVNRALSEETLTVYEPGTQSRNFVHVKDVARAYVRSTERLLTQLEQGETGVEK 246 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI------------FTKQYPTKAHR- 257 + + +D +S AE + + E+ G V + F + T R Sbjct: 247 YEIASDED-LSVMATAEVVQQTAVEKHGFEPDVKLVENPRGNETLVENFAVDFTTATQRL 305 Query: 258 ---PAYSC 262 P +S Sbjct: 306 GWEPTHSV 313 >gi|89098346|ref|ZP_01171230.1| putative LPS biosynthesis related reductase [Bacillus sp. NRRL B-14911] gi|89086895|gb|EAR66012.1| putative LPS biosynthesis related reductase [Bacillus sp. NRRL B-14911] Length = 275 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 100/253 (39%), Gaps = 26/253 (10%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-------IDLLKPKDFASFFLSFSP 51 MK L++G G + + + D ++ R +D P Sbjct: 1 MKILILGGRGMAGHMMVAYLRENTDYQVFFTTRDRADREGIYLDAADSPMLEKVIDQHRP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+IIN AE P++AF +N IA+ A+ G I+ISTD VF G + Sbjct: 61 DIIINCIGLLNGQAAE-NPKLAFQLNGLLPHQIARFAERYGGRLIHISTDCVFSGGIGS- 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + +IY +SK GE + ++ +RT+ + + + L K++ Sbjct: 119 YKEEDTPDGTSIYAQSKQLGEI----VDSRHLTVRTSIIGPELKDDGIGLFLWFMKQQGR 174 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA---EY 228 I+ + + L++A+A+ + +T L G+ H+ + +S D + Sbjct: 175 INGYTEALWNGVTTLELAKAVRGMI-------ETELSGLCHLGGER-KISKHDLLVLFKA 226 Query: 229 IFWESAERGGPYS 241 IF + P S Sbjct: 227 IFNKDGVDIVPDS 239 >gi|218897455|ref|YP_002445866.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] gi|228905448|ref|ZP_04069402.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 4222] gi|228968976|ref|ZP_04129920.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|218541889|gb|ACK94283.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842] gi|228790720|gb|EEM38377.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis serovar sotto str. T04001] gi|228854180|gb|EEM98884.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 4222] Length = 307 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 26/247 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGR---------PDIDLLKPKDFASFFLSFS 50 MK VIG +G I + ++ + + E++ + +ID+L + Sbjct: 1 MKIGVIGGSGFIGKHVTKELLARGYEVVIFDKFKPSIDVPFKEIDILDIATLRENLIDV- 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLSR 109 D +I+ AA VD E +N EG I + + G ++ S+ V+ Sbjct: 60 -DGVIHLAALVGVDNCRLNEEDVVRVNFEGTKNIVQVCNENGIEKLLFSSSSEVYGDGVS 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSMLR 164 P E P + YGK+KL E+ + Y +N + +R ++++GS + L+ Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYASNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178 Query: 165 LAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 A +I++ D Q + I I EN G + P+S Sbjct: 179 QAHSGEDITIYGDGQQIRCFSYISDIVNGTILAFEYEGENFADFNIG------NNKPISM 232 Query: 223 ADFAEYI 229 + A I Sbjct: 233 EELAIKI 239 >gi|163782189|ref|ZP_02177188.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] gi|159882721|gb|EDP76226.1| UDP-glucose-4-epimerase [Hydrogenivirga sp. 128-5-R1-1] Length = 332 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 107/326 (32%), Gaps = 72/326 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGR----PDI----------DLLKPKDFASF 45 M+ LV G G I + + + E++ D DL Sbjct: 8 MRVLVTGGAGYIGSHMVKLLGERGYEVLTYDNLSTGHDWAVLYGRLVVGDLAYKDKLREV 67 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F F PD +++ AAY V ++ EP + N + + + G I+ S+ V+ Sbjct: 68 FGEFKPDAVMHFAAYIVVPESVREPLKYYRNNVVNTINLLEVMEEFGVDKFIFSSSAAVY 127 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSI------ 153 + P+ E +P NP+N YG++K E + +N YV LR V Sbjct: 128 GIPEKIPVSEGAPLNPINPYGETKATVERILRDLSNSGKDFRYVSLRYFNVAGADPEGKI 187 Query: 154 -----FGSNFLLSMLRLAK-ERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 ++ ++ ++ AK E + + + TP + +A A I L Sbjct: 188 GFAYPNPTHLIIRAVKTAKGEFERLEIYGTDYPTPDGTCIRDYIHVVDLADAHIVALEYL 247 Query: 200 IENSDTS--LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-TKAH 256 +E + G H + V V R+ + + +A Sbjct: 248 LEGGQSDVFNCGYGHGYSVKEVV--------------------ETVKRVTGRDFKVVEAP 287 Query: 257 R----PAYSCL--DCSKLANTHNIRI 276 R P L D K+ Sbjct: 288 RREGDPP--VLVADSKKIRERLGWEP 311 >gi|222479501|ref|YP_002565738.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222452403|gb|ACM56668.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 345 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 95/285 (33%), Gaps = 38/285 (13%) Query: 3 CLVIGNNGQIAQSLS---SMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 V G G I + D EI+ + +D+ Sbjct: 27 IAVTGAAGYIGSRVIVEFQEAHPDWEIVAIDNQYRGQVDSVGEVEIQHVDIRNRDRLEDA 86 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 DV+ + AA + VD E+ ++A+ +N G +A G + + V Sbjct: 87 LAGA--DVVCHLAAISGVDDCEENADLAYEVNVTGTNNVAWFCRKTGAALAFPFSMAVLG 144 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL------ 159 PI P +PLN YG++KL GE + ++ + +++G + + Sbjct: 145 DPQSFPITADQPRDPLNWYGRTKLLGERAIETFADGAFPAHLFLKSNLYGEHVVDGTTVS 204 Query: 160 -------LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG--I 210 LA E + Q +AR ++ A L+E + G Sbjct: 205 KPTVINFFVNRALAGETLTVYEPGTQARNFVHVKDVARVYVRSAERLLEQLASGETGTET 264 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 F + ++ +S + AE + + E V + + P A Sbjct: 265 FEIASEED-MSVMEVAEIVREVAHEEREIDVDVELV---ENPRSA 305 >gi|146304598|ref|YP_001191914.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] gi|145702848|gb|ABP95990.1| dTDP-glucose 4,6-dehydratase [Metallosphaera sedula DSM 5348] Length = 325 Score = 137 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 106/308 (34%), Gaps = 45/308 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG-----------RP------DIDLLKPKDFAS 44 K LV G G I + M +++ V R ++D+ P+ Sbjct: 4 KVLVTGGYGFIGSNFVRMIANQADVVVVDNFSVGSNRANLRDVPVKTVELDIRDPRML-D 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 PD I N AA + VD++ +P S N G + + A + I I TD + Sbjct: 63 LIRDERPDFIFNFAAESHVDRSIVDPLSFVSTNVLGTANLLEGARRYDVTFIQIGTDEEY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSK----LAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 + E P NP + Y SK L +Y + + R+A Y + L Sbjct: 123 GEIYSGSFRETDPLNPSSPYSASKAGATLLAMAYARTYHLDVRVTRSANNYGPYQYPEKL 182 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 + + + V +GT + + ++ ++ GI++++A Sbjct: 183 IPKTVIRALHNLPVPV--YGTGKNVRDWIY-VQDNCEAILTVAEKGKPGIYNVSAGEEKT 239 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSCLDCSKLANTHNIRI 276 + + E G + + + RP YS D +KL R Sbjct: 240 N-----LEVVTTILEILGKPNLIKFVED--------RPGHDFRYSV-DSTKLRE-LGWRP 284 Query: 277 ST-WKEGV 283 T ++EG+ Sbjct: 285 RTSFREGI 292 >gi|288818873|ref|YP_003433221.1| UDP-glucose-4-epimerase [Hydrogenobacter thermophilus TK-6] gi|288788273|dbj|BAI70020.1| UDP-glucose-4-epimerase [Hydrogenobacter thermophilus TK-6] gi|308752460|gb|ADO45943.1| UDP-glucose 4-epimerase [Hydrogenobacter thermophilus TK-6] Length = 324 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 86/240 (35%), Gaps = 33/240 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK L+ G G I + + + + + G + DLL + Sbjct: 1 MKVLITGGAGYIGSHVVKLLGEAGHHLLIYDNLSTGSQEAVLYGKLVVGDLLDERKIKEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L F PDV+++ AA +V ++ EP +S N G + A + I+ ST V+ Sbjct: 61 ILDFKPDVVMHFAAKVSVPESVKEPLSYYSNNFCGTMNLLSAMMEAKVRYLIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVAS-----YTNNYVILRTAWVYSIFGSNFL 159 P+ E P P+N YG SKL E + Y+ ++ILR V L Sbjct: 121 GVPPSIPVKEEDPAFPINPYGWSKLMAERCIMDVASSGYSLGFIILRYFNVAGADPEGKL 180 Query: 160 LSMLRLAK---------ERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLR 208 + A + E+ + +GT PT R I + + D Sbjct: 181 GQRGKKATHLIHRALKVAKGEL-PYLEVYGTDYPTYDGTCIRDYIHVTDLARAHLDAMYY 239 >gi|302038314|ref|YP_003798636.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] gi|300606378|emb|CBK42711.1| dTDP-glucose 4,6-dehydratase [Candidatus Nitrospira defluvii] Length = 342 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 105/319 (32%), Gaps = 47/319 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG----------------RPD-----IDLL 37 M+ LV G G I L +Q ++ + P D+ Sbjct: 1 MRILVTGGAGFIGSHLVRRLIQSGRHSVVNLDALKYSGNLENLADLAGHPQYAFVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 K + + + IIN AA T VD++ +P + G G + + A G + Sbjct: 61 DQKAVHATLQTHRIEGIINCAAETHVDRSILDPGAFARTDVVGTGILLEEARQAGVQRFL 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 +STD V+ + + E P + Y SK G+ V SY Y V+ R + Y Sbjct: 121 QVSTDEVYGSVEQGSSTEGDRLEPRSPYSASKAGGDLLVLSYWTTYRFPVVVTRGSNTYG 180 Query: 153 I--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLR 208 + F+ A + + + D S A I + Sbjct: 181 PNQYPEKFIPLFATNAIDGEPLPLYGDGRQCRDWLSVYDHAAGIQHVFEQ-------GEP 233 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 G + G AE I A G S + + + P R YS DC +L Sbjct: 234 GTVYNVGGGNERENITVAEQIV---ATLGKSRSLIRFV--EDRPGHDRR--YSI-DCRRL 285 Query: 269 ANTHNIRISTWKEGVRNIL 287 +++EG++ + Sbjct: 286 RALGWSPQVSFEEGLKQTV 304 >gi|3047109|gb|AAC13620.1| F6N23.17 gene product [Arabidopsis thaliana] gi|7267395|emb|CAB80865.1| putative dTDP-6-deoxy-L-mannose-dehydrogenase [Arabidopsis thaliana] Length = 267 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 47/248 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVGRP-----------------DIDLL 37 K L++G G + Q L + ++ +DL Sbjct: 6 KVLIVGGTGYLGQHLLQAFAGNYGGECELYDVAFTHHSSPLPARLLDAFPHSPAFPVDLK 65 Query: 38 KPKDFASFFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPC 95 S F PDV++N AA + E +P+ A SIN + + ++ Sbjct: 66 SGLGLNSISQDFRQPDVVVNCAALSVPRACEQDPDSAMSINVPTSLVNWLSSFETNKTLL 125 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 I++STD V+ G+ + E T +N+YGKSK+A E + ++ ILR++ ++ Sbjct: 126 IHLSTDQVYQGVK-SFYKEEDETVAVNVYGKSKVAAELLIKDKCQSFAILRSSIIFGPQT 184 Query: 156 SNFL--------------------LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI 195 + L L + K+ + D+F P + ++ Sbjct: 185 VSPLPKTLPIQVLLNTISQRYIYTLEFIDSLKKGDTVDFFHDEFRCPIYVKDLVNITFKL 244 Query: 196 AHNLIENS 203 + Sbjct: 245 IDRWVSGR 252 >gi|224043150|ref|XP_002196929.1| PREDICTED: similar to TDP-glucose 4,6-dehydratase [Taeniopygia guttata] Length = 354 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 112/328 (34%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V++ II + + D D+ Sbjct: 13 RVLVTGGAGFIASHVIVSLVKNYPNYLIINLDKLDYCASLKNLETVSGKENYKFIQGDIC 72 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 +P F + D++ + AA T VD + +N G + AA + Sbjct: 73 EPDFIKQLFETEKIDIVFHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEKFV 132 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 133 YVSTDEVYGGSTDEEFDESSPKRPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVYG 192 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L ++ R+ I Q A + A + + Sbjct: 193 PHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPGE----- 247 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSK------VYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A A+ + + V T YP Sbjct: 248 -IYNIGTNF-EMSIAQLAKELIHLIKKTSSESEMERWMDYVKDRPTNDLRYP-------- 297 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 + K+ + R WKEG+ + Sbjct: 298 --MSSEKM-HNLGWRPKVPWKEGITKTI 322 >gi|222055228|ref|YP_002537590.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] gi|221564517|gb|ACM20489.1| dTDP-4-dehydrorhamnose reductase [Geobacter sp. FRC-32] Length = 281 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 111/308 (36%), Gaps = 50/308 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI------------------DLLKPKDF 42 M+ L++G +G + L E+ R D+ D+ + Sbjct: 1 MRILILGGDGMLGHQLLKHLQPRHEVKVTLRQDLGTYSSLGMFTSENAYDGVDVRSLERL 60 Query: 43 ASFFLSFSPDVIINPAAYT--AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 F P+ IIN D E P + INA +A IG I++ST Sbjct: 61 VEVLSDFRPEAIINAVGIVKQRPDAKESIPSL--EINALLPHRLAVLCKGIGARLIHLST 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VF G + E ++ ++YGK+K GE + N + LRT+ + + L Sbjct: 119 DCVFSGKKGS-YLESDLSDAEDLYGKTKFLGE----VHDTNCLTLRTSIIGHELSRHKSL 173 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 LA+ + + T + ++++R I ++ + + G++ ++++ P+ Sbjct: 174 LDWFLAQTG-AVKGFTNAIYTGFTTIEMSRIIEKMLLDF-----PNASGVYQVSSE--PI 225 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + + E+ G ++ T LD ++ N +W Sbjct: 226 NKYEL----LLLFREKLGHNIELIADSTFCCDR--------SLDSARFRREFNYTPPSWP 273 Query: 281 ---EGVRN 285 EG+ Sbjct: 274 AMIEGLNR 281 >gi|323140857|ref|ZP_08075770.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] gi|322414595|gb|EFY05401.1| UDP-glucose 4-epimerase [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 60/318 (18%), Positives = 109/318 (34%), Gaps = 52/318 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 M LV G G I + + + G + D+ + Sbjct: 1 MNILVTGGAGYIGSHVVEELQKSGFTPIVYDNFSTGHEAAVPDEVQLVEGDIHDVRFAKH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +I+ AA + V ++ +P + N EG+ + +A G ++ ST V Sbjct: 61 IMEQFKIDAVIHFAASSLVGESMTDPAKYYFNNVEGSLHLLEAMRGAGVDRMVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E S P N+YG++KLA E +A Y + Y + A Y Sbjct: 121 YGEPEAVPITEDSRLAPTNVYGRTKLAIEGMLADYDHAYDMRYVALRYFNAAGASPTRDI 180 Query: 152 ---SIFGSNFLLSMLRLAKE-RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S+ + +L+ A+ R+++S+ + PT+ R I + + Sbjct: 181 GEDHSPESHLIPLILKTAQGVRKQVSIFGTDY--PTADGTCVRDYIHVCDLAKAHVLA-- 236 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-----TKAHRPAYSC 262 + H+ + GG + + + KV + +P +A PA Sbjct: 237 --LKHLLS-GGSSRVYNLGSENGFSVRQMIDSAKKVTGV---DFPVVEEERRAGDPA--V 288 Query: 263 L--DCSKLANTHNIRIST 278 L +K+ Sbjct: 289 LIASSAKIREELGWEPQH 306 >gi|228912108|ref|ZP_04075826.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 200] gi|228847535|gb|EEM92471.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis IBL 200] Length = 307 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 26/247 (10%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGR---------PDIDLLKPKDFASFFLSFS 50 MK VIG +G I + ++ + + E++ + +ID+L + Sbjct: 1 MKIGVIGGSGFIGKHVTKELLARGYEVVIFDKFKPSIDVPFKEIDILDIATLRENLIDV- 59 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLSR 109 D +I+ AA VD E +N EG I + G ++ S+ V+ Sbjct: 60 -DGVIHLAALVGVDNCRLNEEDVVRVNFEGTKNIVQVCTENGIEKLLFSSSSEVYGDGVS 118 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSMLR 164 P E P + YGK+KL E+ + Y +N + +R ++++GS + L+ Sbjct: 119 VPFKENDIKIPKSAYGKAKLMSEDYLKEYVSNSLKIRVVRYFNVYGSQQNDNFVISKFLK 178 Query: 165 LAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 A ++I++ D Q + I I EN G + P+S Sbjct: 179 QAHSGKDITIYGDGQQIRCFSYISDIVNGTILAFEYEGENFADFNIG------NNKPISM 232 Query: 223 ADFAEYI 229 + A I Sbjct: 233 EELAIKI 239 >gi|313902633|ref|ZP_07836032.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] gi|313467071|gb|EFR62586.1| NAD-dependent epimerase/dehydratase [Thermaerobacter subterraneus DSM 13965] Length = 298 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 96/266 (36%), Gaps = 34/266 (12%) Query: 26 IIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIA 85 I V +D+ + + A+ F F P+ +I+ AA +V+++ + P+ +N G + Sbjct: 26 IAGVTVERLDITQAGEVAAVFRDFRPEAVIHLAAQVSVERSLERPDQDVDVNVYGTLNLV 85 Query: 86 KAADSIG-IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---- 140 + A + G ++ S+ V+ R P+DE P PL++YG+SKLA E + Y Sbjct: 86 REAVAAGTRRVVFASSAAVYGDPQRLPVDEDHPLKPLSVYGRSKLAAEWLIQQYAQGTGL 145 Query: 141 NYVILRTAWVYSIFGSNFLLSML------RLAKERREISVVCDQFGTPTSALQIARAIIQ 194 VILR VY ++ L+ I Q +ARA + Sbjct: 146 EAVILRLGNVYGPGQRPETGPVVARFFLDALSGRGPVIHGDGQQTRDFVYVGDVARAFVL 205 Query: 195 IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK 254 G+ A G + + A+ I A G P + Sbjct: 206 AL--------AGPAGVVANIAGGRATAIGELAQRIGRLVA--GSPAPRYGP--------- 246 Query: 255 AHRP---AYSCLDCSKLANTHNIRIS 277 RP +S L + Sbjct: 247 -PRPGDIRHSVLSSDRARRLLGWTPR 271 >gi|251795043|ref|YP_003009774.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] gi|247542669|gb|ACS99687.1| UDP-glucose 4-epimerase [Paenibacillus sp. JDR-2] Length = 331 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 113/327 (34%), Gaps = 55/327 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I +++++ + EI+ V R + DL + + Sbjct: 4 MAVLVTGGAGYIGSHAVAALAERGEEIVVVDNLQQGHREAVVGGKLYVGDLRDAEFMDTV 63 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA + V ++ P + N G + + ++ ST + Sbjct: 64 FKENKIDAVIHFAANSLVGESMTNPAKYYHNNVYGTLCLLEKMIEHDVKKIVFSSTAATY 123 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PIDEF T P N YG++KLA E+ + + + + + Y S + Sbjct: 124 GEPENVPIDEFDRTLPTNTYGETKLAMEKMMKWFDVAHGLKYVSLRYFNAAGAHASGKIG 183 Query: 161 SML------------RLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 +R ISV D + TP +A A + L Sbjct: 184 EDHSPETHLIPIVLQAALGQRPHISVFGDDYATPDGTCIRDYIHVSDLADAHVLAVDKLR 243 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 + S+++ I+++ G + + + + ++ + P +A PA Sbjct: 244 QGSESA---IYNLGNGQGFS-----VKEVIEIARKV--TEREIKAVI---EPRRAGDPAT 290 Query: 261 SCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ S + + +I+ Sbjct: 291 LVASSARARKELGWNPS--RANLEDII 315 >gi|300811801|ref|ZP_07092272.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497217|gb|EFK32268.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 357 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 38/256 (14%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 MK LV+G G I ++ + +++ + +DLL A Sbjct: 29 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDPKAKFYQVDLLDKDAVAD 88 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 89 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 148 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ + I A Y Sbjct: 149 YGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGIKSIALRYFNVAGASLDGSI 208 Query: 152 --SIFGSNFLLSMLRLA--KERREISVVCDQFGT--PTSALQIARAIIQI---AHNLIEN 202 L+ + A + ++ D + T T+ + I L Sbjct: 209 GEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVRDYVHVVDLIDAHVLALKHL 268 Query: 203 SDTSLRGIFHMTADGG 218 +T+ +F++ G Sbjct: 269 METNQSDVFNLGTATG 284 >gi|158316959|ref|YP_001509467.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] gi|158112364|gb|ABW14561.1| dTDP-4-dehydrorhamnose reductase [Frankia sp. EAN1pec] Length = 345 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 108/295 (36%), Gaps = 41/295 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD--------------IDLLKPKDFASFF 46 M+ LV+G +G + L V+D ++ R +D+ + F Sbjct: 1 MRVLVLGGDGMLGGELVRRLVRDHDVTATVRATAPSCPPPADRVLSGVDVRRRDTMVDAF 60 Query: 47 LSFSPDVIINPAAYTAVDK-AEDEPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 + PD ++N A + V + AE E+ A +NA +A+ + G +++STD VF Sbjct: 61 AAVRPDAVVN--AVSLVGRRAEGRAELSAIEVNALFPHRLARLCQAAGARLVHVSTDCVF 118 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 G E +P++++G +KL GE + LRT+ V + Sbjct: 119 SGRL-GDYHEEDVPDPVDVHGMTKLLGE----VTEPGTLTLRTSVVGLEAVPAASGLVEG 173 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + EI + + + AR + +L+ L GI+H+ ++ P+S D Sbjct: 174 FLAAKGEIPASRRVVHSALTTAEFARFV-----HLVLVGHPDLTGIWHLASE--PISRFD 226 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + G K+ + L +L + W Sbjct: 227 L---LTMLADRLGRRDVKIVPSDGEA--------RNRALSARRLWSETGYLPPGW 270 >gi|253574886|ref|ZP_04852226.1| UDP-glucose 4-epimerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251845932|gb|EES73940.1| UDP-glucose 4-epimerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 328 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 106/319 (33%), Gaps = 57/319 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I ++++ Q E++ + R + DL A Sbjct: 1 MAILVTGGAGYIGSHTVAALLEQGREVVVIDNLQTGHREALLGGKLYEGDLRDKALLAKL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA + V ++ +P F N G + A D ++ ST + Sbjct: 61 FAENEIEAVIHFAANSLVGESMKDPVKYFDNNVYGTLCLLDAMDQANVRKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 + PI+E PT P N+YG++KL E +A + I + Y S + Sbjct: 121 GEPEKVPIEESDPTRPTNVYGETKLTMERMMAWFDQVLGIKYVSLRYFNAAGAHESGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 R +R I V D + T +A A ++ +L+ Sbjct: 181 EDHRPESHLIPLIIQAALGQRPSIQVFGDDYNTADGTCVRDYIHVSDLADAHLRAVDHLL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ +F++ G + + + G V I P +A PA Sbjct: 241 GGGESD---VFNLGNGQGFS-----VKEVIETVKQVTGRDFPV-AIS----PRRAGDPA- 286 Query: 261 SCL--DCSKLANTHNIRIS 277 L K + Sbjct: 287 -VLIASSDKARRVLGWNPT 304 >gi|34580617|ref|ZP_00142097.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia sibirica 246] gi|28262002|gb|EAA25506.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia sibirica 246] Length = 284 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 103/305 (33%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ ++ +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKNFDIFATARNNSARSYFSKDLSDKLITNVDVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKVLPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFSDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + AE + I + + LD ++ W+E Sbjct: 228 KLEL----LKLVAEIYNKDIDI--ISSDELVV------DRSLDSTRFNEVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|84872457|gb|ABC67268.1| VldD [Streptomyces hygroscopicus subsp. limoneus] Length = 294 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 37/281 (13%) Query: 2 KCLVIGNN---GQIAQSLSSMCVQDV----------EIIRVGRPDIDLLKPKDFASFFLS 48 + L++G+ G IA L+ + + V E V +D+ A+ + Sbjct: 4 RILILGSGYLAGHIAARLTRLGAETVLSSRRAPVLPESRGVRWKQVDVTSGPQVAALMDA 63 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD ++ + + E PE A++ + GA IA A D G P + +STD VF G Sbjct: 64 VEPDAVVAVHGPSDITWCESHPEEAYATHHGGARNIAAALD--GRPVLLVSTDNVFSGED 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLR 164 + E + T P+N YG++KLA E ++ T++ ++LR + VY NFL S++R Sbjct: 122 ES-YGESAQTFPVNAYGRAKLAAERELLD-TSSALVLRVSLVYGWEDRGPRPNFLTSVVR 179 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + ++ + D + TP +A + + G H+ + D Sbjct: 180 SLMRKEQLRIPDDHWNTPVHVEDVAAWATTLM-------SSGRTGTLHL-GGPRRIGRVD 231 Query: 225 FAEYIFWESAERGGPYSKVYRIFT--KQYPTKAHRPAYSCL 263 +A +I + + G + Y A RP +CL Sbjct: 232 WARHI---AEQLGVDPMLIVPTPRIGTAY---ACRPRNACL 266 >gi|76262890|gb|ABA41505.1| dTDP-4-dehydrorhamnose reductase [Streptomyces hygroscopicus subsp. jinggangensis] Length = 324 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 37/281 (13%) Query: 2 KCLVIGNN---GQIAQSLSSMCVQDV----------EIIRVGRPDIDLLKPKDFASFFLS 48 + L++G+ G IA L+ + + V E V +D+ A+ + Sbjct: 34 RILILGSGYLAGHIAARLTRLGAETVLSSRRAPVLPESRGVRWKQVDVTSGPQVAALMDA 93 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 PD ++ + + E PE A++ + GA IA A D G P + +STD VF G Sbjct: 94 VEPDAVVAVHGPSDITWCESHPEEAYATHHGGARNIAAALD--GRPVLLVSTDNVFSGED 151 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGS----NFLLSMLR 164 + E + T P+N YG++KLA E ++ T++ ++LR + VY NFL S++R Sbjct: 152 ES-YGESAQTFPVNAYGRAKLAAERELLD-TSSALVLRVSLVYGWEDRGPRPNFLTSVVR 209 Query: 165 LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + ++ + D + TP +A + + G H+ + D Sbjct: 210 SLMRKEQLRIPDDHWNTPVHVEDVAAWATTLM-------SSGRTGTLHL-GGPRRIGRVD 261 Query: 225 FAEYIFWESAERGGPYSKVYRIFT--KQYPTKAHRPAYSCL 263 +A +I + + G + Y A RP +CL Sbjct: 262 WARHI---AEQLGVDPMLIVPTPRIGTAY---ACRPRNACL 296 >gi|119944553|ref|YP_942233.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] gi|119863157|gb|ABM02634.1| dTDP-4-dehydrorhamnose reductase [Psychromonas ingrahamii 37] Length = 295 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 113/308 (36%), Gaps = 50/308 (16%) Query: 1 MKCLVIGNNGQIAQSL-SSMC-VQDVEIIRVGRP-----------------DIDLLKPKD 41 MK L+IG G + SL ++C V +++ R +D+ Sbjct: 1 MKVLIIGATGMLGYSLFQNLCDVAHLDVYGTVRSIKGKEPFFSDCEERLFKGVDVSDLAA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 + PDV+IN + A +IN+ +A DS I+ STD Sbjct: 61 VEAVIKEIKPDVVINCIGLIKQHSISKQHVDAVAINSLLPHQLASLCDSHSCKLIHFSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 +FDG E + L++YG+SK GE ++ ++ LRT+ + S L Sbjct: 121 CIFDGKK-GFYTEEDTPDALDLYGRSKCLGEVD----SSPHLTLRTSIIGHELDSAVSLV 175 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIEN--SDTSLRGIFHMTADGG 218 L++E F G PT IA LIE + L G++ ++ D Sbjct: 176 DWFLSQENSTKGFSKAIFSGLPTCV---------IARLLIEKILPASDLSGLYQLSVD-- 224 Query: 219 PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 P+ + K+ I +K+ L+ KL + ++ I + Sbjct: 225 PIDKFTL------LNLVADIYNKKIEIIESKELK------IDRSLNSKKLRDALSLEIPS 272 Query: 279 WKEGVRNI 286 WK + + Sbjct: 273 WKSLISEM 280 >gi|289522627|ref|ZP_06439481.1| dTDP-glucose 4,6-dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504463|gb|EFD25627.1| dTDP-glucose 4,6-dehydratase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 351 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 105/334 (31%), Gaps = 60/334 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGR---------------------PDIDL 36 MK LV G G I + V + I + + D+ Sbjct: 1 MKILVTGGAGFIGSNFLRTYVPKYPNHSFINLDKLTYAANLYNLKDISDAKNYFFVQADI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD-----SI 91 + + F F PD++++ AA + VD++ P N G + +A Sbjct: 61 ADFESVKAVFDRFEPDIVVHFAAESHVDRSILGPAEFIKTNIVGTFNLLEACRFYWKDKE 120 Query: 92 GIPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYV----ILR 146 ++STD V+ L T E S +P + Y SK + + V +Y Y + Sbjct: 121 DKLFHHVSTDEVYGSLGDTGYFTEESRYDPSSPYSASKASSDHLVRAYHRTYGLPVKVTN 180 Query: 147 TAWVYSIFG--SNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHNLIEN 202 Y + + + A E + I + AI + Sbjct: 181 CTNNYGPYQFPEKLIPLTILNALEGKPIPIYGKGQNVRDWLYVKDHCEAIWAVMQKGRIG 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK----AHRP 258 ++++ + + D + I AE +++ + A RP Sbjct: 241 E------TYNISGNEEKRNI-DVVKEICQILAEELDRLP-------EEFKSLITFVADRP 286 Query: 259 AYS---CLDCSKLANTHNIRIS-TWKEGVRNILV 288 + LD SK+ + T+ G+R + Sbjct: 287 GHDLRYALDSSKIRCELGWKPKETFNTGLRKTVK 320 >gi|147920194|ref|YP_686040.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110621436|emb|CAJ36714.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 309 Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 101/306 (33%), Gaps = 50/306 (16%) Query: 2 KCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RPDI--------DLLKPKDFASFF 46 + LV G GQ+ ++ + E++ + R I D+ Sbjct: 5 RYLVTGGLGQVGSYITESLLTSGAEVVILDDLSSNGRDSIPGSRLVKGDIRDRALVKDLV 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 D I++ AA V ++ ++P N G + AA + +Y S+ V+ Sbjct: 65 KDV--DAIVHCAAQIFVARSVEDPSFDADNNIFGTINLLDAARNANIRRFVYFSSAAVYG 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA-WVYSIF---------G 155 R P+DE P NP++ YG SKL+GE+ ++ Y + TA ++I+ Sbjct: 123 DPLRLPVDEEHPQNPMSPYGVSKLSGEKYALAFQKIYGVHTTAIRPFNIYSPRQDPSNPY 182 Query: 156 SNFLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 S + + A + + + D T S + + ++ + G H Sbjct: 183 SGVISKFIDRASQGQPPIIFGDGTATRDFVSVHDVVQMVMLMLEKEAAVGKVFNCGTGHS 242 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLAN 270 T G A I A RP YS D S+ Sbjct: 243 TTIG------QLARTIISLYGNEKLEPELH-----------AERPGDIKYSYADISRARE 285 Query: 271 THNIRI 276 + Sbjct: 286 LLGYKP 291 >gi|104774538|ref|YP_619518.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514658|ref|YP_813564.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423619|emb|CAI98565.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093973|gb|ABJ59126.1| UDP-galactose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126370|gb|ADY85700.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 329 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 38/256 (14%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 MK LV+G G I ++ + +++ + +DLL A Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDPKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ + I A Y Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGIKSIALRYFNVAGASLDGSI 180 Query: 152 --SIFGSNFLLSMLRLA--KERREISVVCDQFGT--PTSALQIARAIIQI---AHNLIEN 202 L+ + A + ++ D + T T+ + I L Sbjct: 181 GEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVRDYVHVVDLIDAHVLALKHL 240 Query: 203 SDTSLRGIFHMTADGG 218 +T+ +F++ G Sbjct: 241 METNQSDVFNLGTATG 256 >gi|302038999|ref|YP_003799321.1| putative uDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] gi|300607063|emb|CBK43396.1| putative UDP-glucose 4-epimerase [Candidatus Nitrospira defluvii] Length = 307 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 110/321 (34%), Gaps = 56/321 (17%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG------RPD---------IDLLKPKDFAS 44 MK LV G G I + + + +++ V R + +D+ PK Sbjct: 1 MKVLVTGGAGFIGSHVVDRLLQEGHDVVVVDNLVTGKRKNVPKAAQFYKLDIENPK-LER 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD--Y 102 F + P ++ + AA V ++ ++P +N G + + A G + S+ Sbjct: 60 IFRNERPSIVFHLAAQMNVRRSVEDPMFDAQVNVLGTLNVLEQASKHGARKVIFSSSGGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGSN- 157 ++ P E T PL+ YG SKL GE + Y I LR A VY Sbjct: 120 IYGEQLAFPAPETHITQPLSPYGISKLCGEHYLGYYHRLSGIQVVSLRYANVYGPRQDPE 179 Query: 158 --------FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 F+ MLR E+ ++ Q + + + + G Sbjct: 180 GEAGVVAIFIQKMLR--GEQAVVNGNGRQTRDFVFVED-------VVESNLMAMGPEVEG 230 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--PAYSCLDCSK 267 ++++ G S D + + + K+ A R A S +D +K Sbjct: 231 VYNV-GTGIETSVNDLFKIVVDLTKVEF-----------KEVHGPAKRGEQARSVIDSTK 278 Query: 268 LANTHNIRIS-TWKEGVRNIL 287 L +EG+R + Sbjct: 279 LHRDLGWEPKVDLREGLRRTV 299 >gi|325685523|gb|EGD27615.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 329 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 93/256 (36%), Gaps = 38/256 (14%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 M+ LV+G G I ++ + +++ + +DLL A Sbjct: 1 MRILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDQKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ + I A Y Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEKIMHWADKANGIKSIALRYFNVAGASLDGSI 180 Query: 152 --SIFGSNFLLSMLRLA--KERREISVVCDQFGT--PTSALQIARAIIQI---AHNLIEN 202 L+ + A + ++ D + T T+ + I L Sbjct: 181 GEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVRDYVHVVDLIDAHVLALKHL 240 Query: 203 SDTSLRGIFHMTADGG 218 +T+ +F++ G Sbjct: 241 METNQSDVFNLGTATG 256 >gi|239947535|ref|ZP_04699288.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921811|gb|EER21835.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia endosymbiont of Ixodes scapularis] Length = 284 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 104/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKKFDIFATARNNSARSYFSKDLSDKLITNVDVENHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P IN+ +A I+ISTD Sbjct: 61 LVEVFNKAKPDIVINCIGLVKQLADANDPLKTLPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFPDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E ++ + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSAEG-QVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + + + ++ I + + LD ++ W+E Sbjct: 228 KLELLKLVAEIYNK------EIDIIPSDELV------IDRSLDATRFNEVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 FVKRM 280 >gi|157827241|ref|YP_001496305.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii OSU 85-389] gi|157802545|gb|ABV79268.1| dTDP-4-dehydrorhamnose reductase [Rickettsia bellii OSU 85-389] Length = 284 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 108/305 (35%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ +D+++ R P++D+ Sbjct: 1 MKILILGATGMLGNSMVRFLSTDKDLDVYATSRSSSAHSYFSKDLANKIVPNVDVENYDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 P+++IN ++P A IN+ +A + +G I+ISTD Sbjct: 61 LVEVLNKIKPNIVINCIGLVKQLADANDPLKALPINSLLPHRLAGLCELVGSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YG+SK GE + + LRT+ + N + Sbjct: 121 CVFSGKKGN-YKESDFPDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELSGNRSFT 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NRFLSSEG-SVKGFEKAIYSGFPTVELARIIKNFVL-----PNKKLHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + I + K+ I + + LD + WKE Sbjct: 228 KLELLKLIAEIYNK------KIDIIPSDELV------IDRSLDATHFNEITGYNPPEWKE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|15606348|ref|NP_213727.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] gi|2983546|gb|AAC07120.1| UDP-glucose-4-epimerase [Aquifex aeolicus VF5] Length = 327 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 93/324 (28%), Gaps = 70/324 (21%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG--------------RPDIDLLKPKDFASFF 46 K LV G G I + + E++ DL + F Sbjct: 3 KVLVTGGAGYIGSHVVKALGEKGYEVLIYDNLSTGNEWAVLYGKLVKADLADKETLRRVF 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 F PD +++ AAY V ++ EP + N + + G ++ S+ V+ Sbjct: 63 EEFKPDAVMHFAAYIVVPESVKEPLKYYRNNVVNTINLLEVMQEFGVNKFVFSSSAAVYG 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSIFGSNFLL 160 P+ E +P NP+N YG++K E + N NYV LR V + Sbjct: 123 IPESIPVKEDAPLNPINPYGETKATVERILRDLKNSGKDFNYVSLRYFNVAGADPEGKIG 182 Query: 161 SML------------RLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 A E + + + TP +A A I L Sbjct: 183 FAYPNPTHLIIRAVKTAAGEFDRLEIYGTDYPTPDGTCIRDYIHVTDLAEAHILALEYLF 242 Query: 201 ENSDTSL--------RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 + + + + V+ DF + G P + V Sbjct: 243 SGGKSEVLNCGYGHGYSVLEVVNAVKKVTGVDF--KVVEAPRREGDPPALVA-------- 292 Query: 253 TKAHRPAYSCLDCSKLANTHNIRI 276 D K+ N Sbjct: 293 -----------DNKKIKRVLNWEP 305 >gi|227551782|ref|ZP_03981831.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] gi|227179087|gb|EEI60059.1| UDP-glucose 4-epimerase [Enterococcus faecium TX1330] Length = 377 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 108/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 108 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 109 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 168 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 169 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 228 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 229 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 288 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ ++ G + + + E G I + P +A P S Sbjct: 289 KEGNESNFFNLGSNKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 336 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 337 LVASSEKAREILGWKP 352 >gi|218884406|ref|YP_002428788.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis 1221n] gi|218766022|gb|ACL11421.1| UDP-glucose 4-epimerase (galE-2) [Desulfurococcus kamchatkensis 1221n] Length = 307 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 60/320 (18%), Positives = 110/320 (34%), Gaps = 53/320 (16%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPD-------------IDLLKPKDFASFF 46 M+ LV G G I + L + + + I V R D+ + Sbjct: 1 MRILVTGGGGFIGRFLVSDLVKKGYDAIVVDRGPSPFVEHQRIKYYVGDVTNVIQINNIM 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 PDV+I+ AA A D E EP A +N E + + + + G +++S+ V+ Sbjct: 61 AKHKPDVVIHLAALLA-DTCEIEPLQATKVNIEATQNLIELSITHGIKRFVFMSSASVYH 119 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSI-------- 153 + P+ E P++ YG +K AGE + Y +I LR V+ Sbjct: 120 PDTPEPVREEDAGKPVSYYGVTKYAGELIGSWYYRKGLIDFRALRPTVVFGPGRFRGPSA 179 Query: 154 -FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S + L E+ + D+ + +I +A + Sbjct: 180 EYSSMIIERALN--NEKVIVKNPNDKV-NYIYVRDVVSVLILLAEAEKVK--------YR 228 Query: 213 MTADGGPVSWA-DFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 G VS +F E + +V T +Y +D S++ Sbjct: 229 AYNAAGFVSRVIEFVEMVKKYIPTLQY---EVQPHETVRYAA--------VIDDSRIREE 277 Query: 272 HNIRIS-TWKEGVRNILVNI 290 R T+++ + + + + Sbjct: 278 LGWRPQYTYEKAIEDYIETV 297 >gi|220932900|ref|YP_002509808.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] gi|219994210|gb|ACL70813.1| UDP-glucose 4-epimerase [Halothermothrix orenii H 168] Length = 328 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 102/318 (32%), Gaps = 57/318 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I + + ++ + R + DL + S Sbjct: 1 MNILVTGGAGYIGSHVVKSLFEAGYNVVTLDNLEKGHREAVLGGEFIKGDLKDRELLDSI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 + D +I+ AA++ V ++ + P + N + +A + ++ ST V+ Sbjct: 61 MKDYEIDGVIHLAAHSLVGESMENPGKYYKNNVSNGLNLLEAMVDNDVKYLVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E PT P N YG+SKL E+ + Y Y + + Y Sbjct: 121 GEPREVPITEDHPTAPTNTYGESKLFFEKMMKRYDEIYGLKYVSLRYFNAAGADLSGKIG 180 Query: 152 SIFGSNFLLSMLRLAKE---RREISVVCDQFGTPTSALQIARAIIQ---IAHNLIENSDT 205 L + L K R ++ + + + PT R I +A + + Sbjct: 181 EDHDPETHLIPIVLQKALGLRDKLYIFGNDY--PTRDGTCIRDYIHVNDLADAHVLAIEG 238 Query: 206 SLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY- 260 RG I+++ G + + ++ G I + RP Sbjct: 239 LTRGLESRIYNLGNGEGYS-----VKEVIETASRVIG-----KPI---EAGVGDRRPGDP 285 Query: 261 SCL--DCSKLANTHNIRI 276 + L K+ Sbjct: 286 AVLVASSDKIKEELGWDP 303 >gi|157828329|ref|YP_001494571.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933037|ref|YP_001649826.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia rickettsii str. Iowa] gi|157800810|gb|ABV76063.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908124|gb|ABY72420.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia rickettsii str. Iowa] Length = 284 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 103/305 (33%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++++ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKKFDIFATARNNSARSYFSKDLSDKLITNVNVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFSDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + AE + I + + LD ++ W+E Sbjct: 228 KLEL----LKLVAEIYNKDIDI--IASDELVV------DRSLDSTRFNEVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|320450036|ref|YP_004202132.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] gi|320150205|gb|ADW21583.1| UDP-glucose 4-epimerase [Thermus scotoductus SA-01] Length = 310 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 108/324 (33%), Gaps = 63/324 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEI-----IRVGRPD----------IDLLKPKDFAS 44 M+ LV G G I ++ V + VE+ + GR + +DL + Sbjct: 1 MRVLVTGGAGFIGSHIAESLVREGVEVAVLDNLSTGRRENVPKGIYFYKVDLRDKESLER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P + + AA +V + D P + F +N G+ + +A G ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVDNPTLDFEVNLLGSLNLLEAMRKWGAEKMVFASTGGA 120 Query: 104 FDG--LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G +E P P + Y SK + E +++Y NY + + Y Sbjct: 121 IYGEVPEGERAEETWPPKPKSPYAASKASFEHYLSAYGQNYGLKWVSLRYGNVYGPRQDP 180 Query: 162 MLRLA---------KERREISVVCDQFGTP---------TSALQIARAIIQIAHNLIENS 203 + +++ TP + RA +A +E Sbjct: 181 HGEAGVVAIFSERILKGEPVTLYA--RRTPGDEGCVRDYIYVADVVRA-HNLALKGLE-- 235 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY--- 260 GI+++ G + + + AE G + +V RP Sbjct: 236 -----GIYNVGTGEGHTT-----QEVLLAVAEAAGKHPEVNPAP--------PRPGDLER 277 Query: 261 SCLDCSKLANTHNIRISTWKEGVR 284 S L KL ++EG+R Sbjct: 278 SVLSPLKLMAHGWRPEVGFQEGIR 301 >gi|282163443|ref|YP_003355828.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] gi|282155757|dbj|BAI60845.1| putative nucleotide sugar epimerase/dehydratase [Methanocella paludicola SANAE] Length = 321 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 100/313 (31%), Gaps = 52/313 (16%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG---------------RPDI-----DLLKP 39 M L+ G G + L + ++I + + D+ Sbjct: 1 MNILITGGAGFVGSHLCDKYTLNGDKVICLDNFMNGSLTNIRHLIGHRNFKLINGDIRNF 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 DV+ + AA VD++ EP++ + IN G + +AA I+ Sbjct: 61 DLLEKIMRDV--DVVFHLAAQIHVDRSVVEPKLTYDINVIGTQNVLEAARMYDVQKVIHA 118 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 ST V+ P+DE P N + YG SK+A + SY N Y I+R +Y Sbjct: 119 STSEVYGSTQYAPMDEDHPLNAPHPYGASKIAADRLCFSYINTYGMNICIMRPFNLYGPR 178 Query: 155 GSNFLLSMLRLAKERREISV-------VCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 + +R ++ +Q T I A I H+ Sbjct: 179 QKDTGYGGAISIFTKRVLNNMPPIIFGDGEQTRDYTYVEDIVEAYDLILHHEGRMGQPMN 238 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL--DC 265 G G + D A I + G ++ + + P + R L D Sbjct: 239 FGT------GNEIKILDLARLIIKMCGKEG----QIKPVCVEPRPGEVVR-----LIADI 283 Query: 266 SKLANTHNIRIST 278 S+ + + Sbjct: 284 SRAKSVLGWKPHY 296 >gi|313124421|ref|YP_004034680.1| udp-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280984|gb|ADQ61703.1| UDP-glucose 4-epimerase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 329 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 93/256 (36%), Gaps = 38/256 (14%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 MK LV+G G I ++ + +++ + +DLL A Sbjct: 1 MKILVVGGAGYIGSHAVRRLVADGNDVVVLDSLFTGHKEAIDQKAKFYQVDLLDKDAVAD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 VLKKEKIEAVMHFAAYSLVGESVKKPLKYYKNNVSGMISLLEAMEETGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ + I A Y Sbjct: 121 YGIPEKLPITEETPLNPINPYGETKMMMEKIMYWADKANGIKSIALRYFNVAGASLDGSI 180 Query: 152 --SIFGSNFLLSMLRLA--KERREISVVCDQFGT--PTSALQIARAIIQI---AHNLIEN 202 L+ + A + ++ D + T T+ + I L Sbjct: 181 GEDHHPETHLIPNIMKAALAGGGDFTIFGDDYDTKDGTNVRDYVHVVDLIDAHVLALKHL 240 Query: 203 SDTSLRGIFHMTADGG 218 +T+ +F++ G Sbjct: 241 METNQSDVFNLGTATG 256 >gi|238651060|ref|YP_002916917.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia peacockii str. Rustic] gi|238625158|gb|ACR47864.1| UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase [Rickettsia peacockii str. Rustic] Length = 284 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 104/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ D +I R ++++ Sbjct: 1 MKILILGVTGMLGNSIFRFLSSDKKFDIFATARNNSARSYFSKDLSDKLITNVNVENHDA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFNQTKPDIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFSDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E + + +++AR I + L G++H+ + P++ Sbjct: 176 NWFLSAE-DSVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + + + + + I + + LD ++ W+E Sbjct: 228 KLELLKLVSEIYNK------DIDIISSDELVV------DRSLDSTRFNAVTGYTPPEWRE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|86609640|ref|YP_478402.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558182|gb|ABD03139.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 334 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 102/296 (34%), Gaps = 51/296 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI--------------IRVGRPDI-DLLKPKDFASF 45 M+ LV G G I + +R G +I DL + Sbjct: 1 MRLLVTGGAGYIGSHTCKALAASGHLPITYDNLVYGHPWAVRWGPLEIGDLADRQRLDQV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 + P+ +I+ AAY V ++ +P + N G+ ++ +A GIP I + ST + Sbjct: 61 IQHYRPEGVIHFAAYAYVGESVKDPGKYYRNNVAGSLSLLEAMRDHGIPYIVFSSTCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI E P P+N YG+SKL E+ + + + I + Y Sbjct: 121 GVPERIPIPESHPQRPINPYGQSKLMVEQILQDFQVAHGIRSISLRYFNAAGADPDGEIG 180 Query: 152 SIFGSNFLLSMLRL---AKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIENSDT 205 L L L +R I+V D + TP T + AH L + Sbjct: 181 EAHDPETHLIPLVLEVAGGQRLHITVFGDDYDTPDGTCIRDYIHVTDLAQAHVLAIEALA 240 Query: 206 SLRGI---FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP 258 S R I +++ G + + +A G V A RP Sbjct: 241 SGRPIQPAYNLGNGRGFS-----VKEVIATAAAVTGKRIPVQ--------MGARRP 283 >gi|157825583|ref|YP_001493303.1| dTDP-4-dehydrorhamnose reductase [Rickettsia akari str. Hartford] gi|157799541|gb|ABV74795.1| dTDP-4-dehydrorhamnose reductase [Rickettsia akari str. Hartford] Length = 284 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 104/305 (34%), Gaps = 44/305 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ ++ ++ R ++D+ Sbjct: 1 MKILILGVTGMLGNSIFRFLSREKKFDVYATARNNSARFYFSKDLSNQLITNVDVENHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 F PD++IN ++P A IN+ +A I+ISTD Sbjct: 61 LVEVFYKVKPDIVINCIGIVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHISTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YG+SK GE + + LRT+ + N L Sbjct: 121 CVFSGKKGN-YKESDFPDCDDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSLI 175 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+ E +I + +++AR I+ + L G++H+ + P++ Sbjct: 176 DWFLSAEG-QIKGFEKAIYSGFPTVELARIIMDFVL-----PNKELHGLYHVASK--PIN 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + AE + I + + +D ++ W E Sbjct: 228 KLEL----LRLVAEIYNKAIDI--IPSDELV------IDRSMDGTRFNEVTGYNPPQWSE 275 Query: 282 GVRNI 286 V+ + Sbjct: 276 LVKRM 280 >gi|332204384|gb|EGJ18449.1| rmlD substrate binding domain protein [Streptococcus pneumoniae GA47901] Length = 102 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYT 61 L+ G NGQ+ L + + + E + V ++D+ + F P ++ + AAYT Sbjct: 2 ILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITNEEMVEKVFEEVKPTLVYHCAAYT 61 Query: 62 AVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 AVD AEDE E+ F+IN G +AKA++ G +YISTD Sbjct: 62 AVDAAEDEGKELDFAINVMGTKNVAKASEKHGATLVYISTD 102 >gi|50730649|ref|XP_416988.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Gallus gallus] Length = 357 Score = 135 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 113/328 (34%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V++ II + + D D+ Sbjct: 16 RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 75 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 +P F + D++++ AA T VD + +N G + AA + Sbjct: 76 EPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVEKFV 135 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 136 YVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVYG 195 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L ++ R+ I Q A + A + + Sbjct: 196 PHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPGE----- 250 Query: 209 GIFHMTADGGPVSWADFAEYIFWESA------ERGGPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP Sbjct: 251 -IYNIGTNF-EMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYP-------- 300 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 + K+ + R WKEG++ + Sbjct: 301 --MSSEKM-HNLGWRPKVPWKEGIKKTI 325 >gi|212550155|gb|ACJ26806.1| dTDP-4-dehydrorhamnose reductase (L-QuiNAc synthase) [Salmonella enterica subsp. diarizonae] Length = 289 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 112/306 (36%), Gaps = 49/306 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKDF 42 K L++G NG + SL E+I R ++D K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGGYEVIGTTRNIVVAEQLEQKLNVKIIDNVDATDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S P++++N A ++ IN+ +A+ + I+ STD Sbjct: 64 ESVVEEHKPNIVLNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHNAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G E ++ +++YGKSK GE + ++ LRT+ + GSN L Sbjct: 124 IFKGTKGN-YVEDDESDAIDLYGKSKFLGEVGY----DGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L+++ ++ + + PT + ++ H + ++ S G+FH++ D P+ Sbjct: 179 WFLSQKN-SVTGFTNAIFSGLPTCY------MAEVIHKYVLPNNLS--GLFHLSVD--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S D + G + T + + R S L N +W Sbjct: 228 SKYDL----LNIIKKVYGKNIDIKP--TDDF--RIDRSLNSTL----FRNKTIFAPESWT 275 Query: 281 EGVRNI 286 + + + Sbjct: 276 KLIEKM 281 >gi|317121557|ref|YP_004101560.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] gi|315591537|gb|ADU50833.1| NAD-dependent epimerase/dehydratase [Thermaerobacter marianensis DSM 12885] Length = 322 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 110/326 (33%), Gaps = 62/326 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------------QDVEIIRVG--------------RPD 33 M+ LV G G I + + EI+ + Sbjct: 1 MRVLVTGAAGFIGSHVVERLLKTGNGNTPGMEGLPSCEIVAIDDFSAGQVRKIGDLAVER 60 Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIG 92 +D+ + A+ F F P+ +I+ AA +V+++ + P+ +N G + A + Sbjct: 61 LDVTEAAAVAAVFRDFGPEAVIHLAAQVSVERSLERPDRDVEVNVYGTLNVLRAAVAAGA 120 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTA 148 ++ S+ V+ R P+DE P PL++YG+SKL E + Y VILR Sbjct: 121 RRVVFASSAAVYGNPQRLPVDEEHPLEPLSVYGRSKLTAEWLIQQYARGTGLEAVILRLG 180 Query: 149 WVYSIFGSNFLLSML------RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIEN 202 VY ++ L E I Q +ARA +A Sbjct: 181 NVYGPGQRPETGPVVARFFVDALRGEGPLIHGDGRQTRDFVYVTDVARA-FALALVGPAG 239 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---A 259 ++ G G + AD AE I G P + RP Sbjct: 240 VVANISG-------GTATAIADLAERIHQL--VEGAPAPRYGP----------PRPGDIR 280 Query: 260 YSCLDCSKLANTHNIRIS-TWKEGVR 284 +S LD + + EG++ Sbjct: 281 HSVLDNRRARELMGWAPRVSLDEGLK 306 >gi|120555291|ref|YP_959642.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] gi|120325140|gb|ABM19455.1| dTDP-4-dehydrorhamnose reductase [Marinobacter aquaeolei VT8] Length = 290 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 113/297 (38%), Gaps = 26/297 (8%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFA-SFFLSFSPD---VIIN 56 M LV+ + G + + L + + + + P + ++ P+ +IIN Sbjct: 1 MHVLVVHDYGPLGKVLLERLRETH----LRISPLLVSDPANVDLHALDNWIPEDTALIIN 56 Query: 57 PAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFS 116 +KAE E A+A+ A + + +S+ YVFDG + + Sbjct: 57 ALWLADPEKAEKNREATHEAAFSLPLALAEHARERNMALLQLSSCYVFDGRKQGAYIASN 116 Query: 117 PTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVC 176 P P+N G+ + E+ + + ++ILRT W + F+ + R + +S+ Sbjct: 117 PGQPVNELGRWQWECEQALRTQLPRHIILRTGW----SLARFIGKVQRSTAQGG-LSLPG 171 Query: 177 DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER 236 G P + +AR I+ +A + + + G + ++ + I A Sbjct: 172 RCQGQPVAVKDLARVIVAVALQI--DCGAEVWGTYQYAG-AEEINLYELGLAI----AGM 224 Query: 237 GGPYSKVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN---ILVN 289 G + + + P P + + C+K+ NT I+ W+ + +L Sbjct: 225 PGIPEGIKVV--DEVPDWGHIEPVNTTMVCTKIRNTFGIKQMPWRTWLSEEVAMLKE 279 >gi|314937479|ref|ZP_07844812.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|314942138|ref|ZP_07848992.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|314947522|ref|ZP_07850937.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] gi|314951509|ref|ZP_07854558.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|314992599|ref|ZP_07858017.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|314995466|ref|ZP_07860566.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313590300|gb|EFR69145.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a01] gi|313592891|gb|EFR71736.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133B] gi|313596349|gb|EFR75194.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133A] gi|313599061|gb|EFR77906.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133C] gi|313643120|gb|EFS07700.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0133a04] gi|313646072|gb|EFS10652.1| UDP-glucose 4-epimerase [Enterococcus faecium TX0082] Length = 377 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 106/316 (33%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 49 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 108 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 109 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 168 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +P NP N YG+SKL E+ + +Y YV LR V + Sbjct: 169 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 228 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 229 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 288 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ + G + + + E G I + P +A P S Sbjct: 289 KEGNESNFFNLGSSKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 336 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 337 LVASSEKAREILGWKP 352 >gi|282848992|ref|ZP_06258381.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294793485|ref|ZP_06758622.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] gi|282581267|gb|EFB86661.1| NAD-binding protein [Veillonella parvula ATCC 17745] gi|294455055|gb|EFG23427.1| UDP-glucose 4-epimerase [Veillonella sp. 3_1_44] Length = 307 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 107/321 (33%), Gaps = 56/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RP---------DIDLLKPKDFAS 44 M V G G I L ++ +++ + R ++D+ PK S Sbjct: 1 MNICVTGGAGFIGSHLVDRLIELGHDVLVIDNLSTGMRSFVHEDAQFIEMDVRDPK-LLS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P ++ + AA T V + + P +N G + A + + S+ V Sbjct: 60 VFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACRKVNVEQFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L+ P+ E P + YG +KL E + Y N V R A VY + Sbjct: 120 YGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + ++V D Q + A N+ + GI++ Sbjct: 180 EGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDA------NIKAMGNGQCTGIYN 233 Query: 213 MTADGGP-----VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++ + G ++ I ++ I +S L K Sbjct: 234 ISTNKGTSVNELITRF---RTISGTDFMVYYEDERIGDI------------KHSRLSNVK 278 Query: 268 LANTHNIRI-STWKEGVRNIL 287 +T ++G++ L Sbjct: 279 AERDFGFTATTTLEDGLQKTL 299 >gi|114769690|ref|ZP_01447300.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] gi|114549395|gb|EAU52277.1| UDP-glucose 4-epimerase [alpha proteobacterium HTCC2255] Length = 337 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 87/244 (35%), Gaps = 44/244 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG----------------------RPDIDLL 37 M+ LV G G I + E+ + + D+ Sbjct: 1 MRVLVTGGAGYIGSHTCVELLKAGHEVFVIDNLSNGHETSLERVRLITNCELQFTNADIR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 F +F PD +I+ A AV ++ P + + +N G+ ++ A G + Sbjct: 61 DANALDKIFNTFKPDSVIHFAGLKAVGESVANPLMYYDVNVGGSVSLLTAMSKAGCNKIV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-----TNNYVILRTAWVY 151 + S+ V+ P DE PTNP+N YG++KL E + + VILR Sbjct: 121 FSSSATVYGKPQYLPYDEEHPTNPVNPYGRTKLIIENIINDWTEVDTNRKGVILRYFNPV 180 Query: 152 SIFGSNFLLS---------MLRLAK----ERREISVVCDQFGTPTSALQIARAIIQIAHN 198 S + M +A+ R +++ +++ TS AR I + Sbjct: 181 GAHESGQIGEEPIGIPNNLMPYIAQVAGGRREHLNIFGNEYD--TSDGTGARDYIHVVDL 238 Query: 199 LIEN 202 + + Sbjct: 239 ALAH 242 >gi|167463396|ref|ZP_02328485.1| UDP-glucose 4-epimerase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381224|ref|ZP_08055227.1| hypothetical protein PL1_0136 [Paenibacillus larvae subsp. larvae B-3650] gi|321154800|gb|EFX47071.1| hypothetical protein PL1_0136 [Paenibacillus larvae subsp. larvae B-3650] Length = 329 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 111/327 (33%), Gaps = 55/327 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 M LV G G I ++++ E++ V R + DL Sbjct: 1 MAVLVTGGAGYIGSHTVAALLEGGQEVVIVDNLQQGHRKAVLGGRLYEGDLRDAVFMDLV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA + V ++ + P + N G + + + ++ ST + Sbjct: 61 FRENEIEAVIHFAANSLVGESMNHPIKYYHNNVYGTLCLLEKMNEYNVKRIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI E T P N YG++KLA E+ + + Y I + Y Sbjct: 121 GEPERVPIQETDRTVPTNTYGETKLAMEKMMHWFDIAYGIRYVSLRYFNAAGAHISGKIG 180 Query: 152 SIFGSNFLLSMLRL---AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 L L L +R IS+ + + TP +A A + L+ Sbjct: 181 EDHSPETHLIPLILQVPLGQREHISIFGEDYPTPDGTCIRDYIHVSDLADAHVLAVQKLL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++S I+++ G + + + + G + I P +A PA Sbjct: 241 TGGESS---IYNLGNGQGFS-----VKEVIDIARKVTG-----HAIPAVVEPRRAGDPAI 287 Query: 261 SCLDCSKLANTHNIRISTWKEGVRNIL 287 ++ + + ++ + I+ Sbjct: 288 LVASSDRIKEELGWKPT--RDSLEAII 312 >gi|315646705|ref|ZP_07899821.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] gi|315277911|gb|EFU41234.1| NAD-dependent epimerase/dehydratase [Paenibacillus vortex V453] Length = 305 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 57/319 (17%), Positives = 105/319 (32%), Gaps = 57/319 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVG----------RPDIDLLKPKDFA-----S 44 MK +V G G I L + V Q E+ + + +L D + Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQGYEVHVIDNLTTGDPGRLHSEA-ILHVADVNSQQTTA 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + PDV+ + AA V ++ EP + N G I +A G ++ ST V Sbjct: 60 YISVLKPDVVFHLAAQADVQRSIKEPPLDADANIMGTINILEACRKAGVRKIVFASTSGV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + L + + E P +P++ Y +SK+ GE+ + Y Y ILR VY + Sbjct: 120 YGDLEKPQLTEDDPVSPISFYAQSKITGEQYIRLYHQFFGLKYTILRFGNVYGPGQTAKG 179 Query: 157 --NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ + + D Q + A + H + + H Sbjct: 180 EGGVVAVFGNRLRQGIPLQIYGDGEQTRDFIYVKDVVEANLASIHQ-------GDQHVLH 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-----SCLDCSK 267 ++ G I G +++ A SCL+ + Sbjct: 233 VSTGSGRT--------INTLVDVIG----RLHPDPIDVNYMPAK---NGDILHSCLNNDR 277 Query: 268 LANTHNI-RISTWKEGVRN 285 + + ++G+ Sbjct: 278 TRELLAWNPLYSLEQGIAE 296 >gi|312110507|ref|YP_003988823.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] gi|311215608|gb|ADP74212.1| UDP-glucose 4-epimerase [Geobacillus sp. Y4.1MC1] Length = 328 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 103/317 (32%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ E +I V P+ D+ F Sbjct: 2 ILVCGGAGYIGSHAVYRLIEKGEKVIVVDNLQTGHREAVHPEAVFYQGDIRDRAFLRDVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +I+ AA + V ++ EP + N G + + + G+ ++ ST V+ Sbjct: 62 RKHEIDTVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNEFGVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------SI 153 + PI E PT P N YG++KLA E+ + Y I + Y Sbjct: 122 EPKQIPIVETDPTMPTNTYGETKLAMEKMMKWVDRAYGIRYISLRYFNVAGAYGTLIGED 181 Query: 154 FGSNFLLSMLRL---AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 L L L +R I + D + T L + A I L Sbjct: 182 HDPETHLIPLILKVPLGQREAIHIFGDDYDTHDGTCIRDYIHVLDLVDAHILAVEKLRSG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 ++++ ++++ G + + + + G + I + +A RP + Sbjct: 242 AESN---VYNLGNGNGFT-----VKEVIEAARKVTG-----HPIPAR---VRARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 KLVASAEKAKRELGWEP 302 >gi|293570640|ref|ZP_06681691.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] gi|291609311|gb|EFF38582.1| UDP-glucose 4-epimerase [Enterococcus faecium E980] Length = 329 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 108/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ ++ G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSNKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREILGWKP 304 >gi|326913956|ref|XP_003203297.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Meleagris gallopavo] Length = 357 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 114/328 (34%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V++ II + + D D+ Sbjct: 16 RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFIQGDIC 75 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 KP F + D++++ AA T VD + +N G + AA + Sbjct: 76 KPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEAKVEKFV 135 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G + DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 136 YVSTDEVYGGSTDQEFDESSPKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVYG 195 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L ++ R+ I Q A + A + + Sbjct: 196 PHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKPGE----- 250 Query: 209 GIFHMTADGGPVSWADFAEYIFWESA------ERGGPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP Sbjct: 251 -IYNIGTNF-EMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYP-------- 300 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 ++ K+ + R WKEG++ + Sbjct: 301 --MNSEKM-HNLGWRPKVPWKEGIKKTI 325 >gi|293375313|ref|ZP_06621595.1| UDP-glucose 4-epimerase [Turicibacter sanguinis PC909] gi|325842511|ref|ZP_08167682.1| UDP-glucose 4-epimerase [Turicibacter sp. HGF1] gi|292646069|gb|EFF64097.1| UDP-glucose 4-epimerase [Turicibacter sanguinis PC909] gi|325489555|gb|EGC91919.1| UDP-glucose 4-epimerase [Turicibacter sp. HGF1] Length = 326 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 119/329 (36%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 MK LV G G I ++ ++ Q +++ V P+ + + Sbjct: 1 MKVLVTGGAGYIGSHAVYALIEQGHDVVVVDNLVTGHRGDVHPEATFYHGSIADYRFMTE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +I+ AAY+ V ++ P + N G + KA + G+ ++ ST Sbjct: 61 VLRKELVDGVIHFAAYSLVGESMTNPFKYYDNNMSGTNVLLKAMEDCGVKNIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + PI E PTNP N+YG++KLA E + Y NYV LR V S Sbjct: 121 YGEAQNIPILETDPTNPTNVYGETKLAMERMINWYHKAHDTNYVSLRYFNVAGAHESGLI 180 Query: 157 --------NFLLSMLRLAKERRE-ISVVCDQFGT--------PTSALQIARAIIQIAHNL 199 + + +L++A RRE I+V D + T +A A I L Sbjct: 181 GEKHDPETHLIPIILQVASGRREAINVFGDDYETADGTCIRDYIHVCDLAEAHILAMQYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + +++ I ++ G F+ E+A + I P +A PA Sbjct: 241 VNGGEST---ICNLGNGEG------FSVLEMIEAARE----VTNHPIPAIISPRRAGDPA 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 K V++++ Sbjct: 288 KLIASSQKAKEILGWMPKH--PAVKDMIA 314 >gi|295398886|ref|ZP_06808868.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] gi|294978352|gb|EFG53948.1| UDP-glucose 4-epimerase [Geobacillus thermoglucosidasius C56-YS93] Length = 328 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 110/317 (34%), Gaps = 59/317 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE-IIRVG----------RPDI-----DLLKPKDFASFF 46 LV G G I ++ E +I V P+ D+ F Sbjct: 2 ILVCGGAGYIGSHAVHRLIEKGEQVIVVDNLQTGHREAVHPEAIFYQGDIRDRAFLRDVF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 D +I+ AA + V ++ EP + N G + + + + ++ ST V+ Sbjct: 62 RKHEIDAVIHFAANSLVGESMQEPLKYYDNNVYGTQVLLEVMNESSVKQIVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIF------- 154 + PI E PT P N YG++KLA E+ + +Y Y+ LR V + Sbjct: 122 EPKQIPIVETDPTMPTNTYGETKLAVEKMMKWVEQAYGIRYISLRYFNVAGAYGTLIGED 181 Query: 155 ---GSNFLLSMLRL-AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 ++ + +L++ +R EI + D + T L + A I L Sbjct: 182 HDPETHLIPLILKVPLGQRDEIHIFGDDYDTHDGTCIRDYIHVLDLVDAHILAVEKLRSG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 ++++ ++++ G + + + + G + I + A RP + Sbjct: 242 AESN---VYNLGNGNGFT-----VKEVIEAARKVTG-----HPIPARVM---ARRPGDPA 285 Query: 262 CL--DCSKLANTHNIRI 276 L K Sbjct: 286 KLVASAEKAKRELGWEP 302 >gi|307265739|ref|ZP_07547291.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919253|gb|EFN49475.1| UDP-glucose 4-epimerase [Thermoanaerobacter wiegelii Rt8.B1] Length = 329 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 112/329 (34%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIR-----VGRPD---------IDLLKPKDFASF 45 M LV G G I + ++ + E++ G + DL Sbjct: 1 MAILVCGGAGYIGSHTVVALLRRKEEVVIIDNLITGHKESVLGGKLYIGDLKDEVFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + +I+ AA++ V ++ EP + N G ++ KA + ++ ST V+ Sbjct: 61 FTENEIEAVIDFAAFSLVGESVSEPFKYYENNVCGTLSLLKAMKKHNVGKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI E TNP + YG++KLA E+ + Y I A Y Sbjct: 121 GEPERIPIKEEDKTNPTSPYGETKLAVEKMLKWADVAYGIKYVALRYFNVAGAIETGEIG 180 Query: 152 --SIFGSNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-------AHNLIE 201 ++ + +L++A +R +I + D + PT R I + L + Sbjct: 181 EDHSTETHLIPIILQVALGKREKIMIYGDDY--PTKDGTCIRDYIHVMDLADAHIRALDK 238 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY- 260 + I+++ G + + + + G + I + RP Sbjct: 239 LRKDNESAIYNLGNGEGFS-----VKEVIEVARKVTG-----HPIPAE---VTGRRPGDP 285 Query: 261 SCL--DCSKLANTHNIRISTWKEGVRNIL 287 + L K+ + I+ Sbjct: 286 AVLVASSEKITKELGWTPKY--TSLEEII 312 >gi|291393148|ref|XP_002713048.1| PREDICTED: TDP-glucose 4,6-dehydratase [Oryctolagus cuniculus] Length = 355 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 109/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F + D++++ AA T VD + +N G + AA G I Sbjct: 79 DSHFVKRLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEAGVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYQFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R W+EG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWEEGIKKTI 328 >gi|86144027|ref|ZP_01062365.1| dTDP-D-glucose 4,6-dehydratase [Leeuwenhoekiella blandensis MED217] gi|85829487|gb|EAQ47951.1| dTDP-D-glucose 4,6-dehydratase [Leeuwenhoekiella blandensis MED217] Length = 348 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 67/334 (20%), Positives = 115/334 (34%), Gaps = 61/334 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVG----------RPDI-----------DL 36 MK L+ G G I + V + EI + DI D+ Sbjct: 1 MKILITGGAGFIGSHVVRRFVLNYPNYEIYNLDALTYAGNLENIADIENQANYHFVKGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI----- 91 F D +++ AA + VD++ +P N G + A +I Sbjct: 61 TDAAFIDQLFQEQQFDGVVHLAAESHVDRSIKDPLAFVKTNVLGTMNLLNATKAIWEHNY 120 Query: 92 -GIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVIL 145 G ++STD V+ L E + +P + Y SK + + V +Y YVI Sbjct: 121 AGKRFYHVSTDEVYGALGAEGLFTETTAYDPNSPYSASKASSDHFVRAYGETYGLPYVIT 180 Query: 146 RTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTPT----SALQIARAIIQIAHNL 199 + Y F + + + + V D G T + ARAI + + Sbjct: 181 NCSNNYGPNHFPEKLIPLFINNIINNKPLPVYGD--GNYTRDWLYVIDHARAI-DLVFHK 237 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RP 258 E ++T G F+ + D + + + + G ++Q T RP Sbjct: 238 GELAETYNIGGFNEWKNI------DLVKLLCEQMDLKLGREEG----TSEQLITFVKDRP 287 Query: 259 ----AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D SK+ S T++EG++ + Sbjct: 288 GHDLRYAI-DASKINKELGWEPSVTFEEGLKQTI 320 >gi|238019556|ref|ZP_04599982.1| hypothetical protein VEIDISOL_01425 [Veillonella dispar ATCC 17748] gi|237864255|gb|EEP65545.1| hypothetical protein VEIDISOL_01425 [Veillonella dispar ATCC 17748] Length = 319 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 111/327 (33%), Gaps = 68/327 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RP---------DIDLLKPKDFAS 44 M V G G I L ++ ++ + R ++D+ PK S Sbjct: 13 MNICVTGGAGFIGSHLVDRLIELGHNVLVIDNLSTGMRSFVHESAQFIEMDVRDPKLV-S 71 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P ++ + AA T V + + P +N G + A + + S+ V Sbjct: 72 IFEEFKPSIVFHEAAQTMVQSSMENPGYDCDVNLLGLINVLDACRKVKVEQFLMPSSAAV 131 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L+ P+ E P + YG +KL E + Y N V R A VY + Sbjct: 132 YGDLAVLPLTEELSGMPSSFYGLTKLTAEGYLRIYREAFGLNTVCFRYANVYGPRQGDGG 191 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + ++V D Q + A N+ + + GI++ Sbjct: 192 EGGVISIFNRLIVEGKPLTVYGDGEQTRDFIYVEDVVEA------NIKAMGNNNCTGIYN 245 Query: 213 MTADGG-----------PVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 ++ + G +S ADF + +E+ G +S Sbjct: 246 VSTNTGTSVNELITRFRTISGADF--MVHYEAERIGDI-------------------KHS 284 Query: 262 CLDCSKLANTHNIRI-STWKEGVRNIL 287 L +K +T +G++ L Sbjct: 285 RLSNAKAERDFGFVASTTLDDGLQKTL 311 >gi|256848123|ref|ZP_05553567.1| UDP-glucose 4-epimerase [Lactobacillus coleohominis 101-4-CHN] gi|256715183|gb|EEU30160.1| UDP-glucose 4-epimerase [Lactobacillus coleohominis 101-4-CHN] Length = 331 Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 100/316 (31%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRPDI----------DLLKPKDFAS 44 M LV G G I + V++ E ++ G D+ Sbjct: 1 MAILVCGGAGYIGSHMVKRLVENGEDVVVADNLSTGHKKAIDPQAKFYQGDIRDRAFLDR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 FL+ +++ AA++ V ++ EP F N G + +A GI I + ST Sbjct: 61 IFLNEDIKAVVHFAAFSIVPESMSEPLKYFDNNTGGMITLLEAMRDFGIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P+N YG SKL E +A Y I A Y Sbjct: 121 YGIPEHMPIKETDSQKPINPYGLSKLMMEHMMAWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + M +R E+S+ D + TP T+ + +++ Sbjct: 181 GEDHGPETHLVPIIMQVAQGKRPELSIFGDDYNTPDGTNVRDYVHVMDLADAHILALKYL 240 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK--AHRP--AYS 261 + G F+ E+A + K+ P K A RP S Sbjct: 241 EDNNQSNAFNLGSST---GFSNKQMLEAARE---------VTGKEIPAKIAARRPGDPDS 288 Query: 262 CL-DCSKLANTHNIRI 276 + K + + Sbjct: 289 LIAASDKARSVLGWKP 304 >gi|326792042|ref|YP_004309863.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] gi|326542806|gb|ADZ84665.1| UDP-glucose 4-epimerase [Clostridium lentocellum DSM 5427] Length = 330 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 112/316 (35%), Gaps = 62/316 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVGRPD---------------IDLLKPKDFAS 44 MK LV+G G I ++ +++I + + +D+ Sbjct: 1 MKILVVGGAGYIGSHAVKQLTENQIDVIVIDSLETGHIESVPSNVPFYQVDIRNKSAVKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 D +I+ AA + V ++ P ++ N G ++ +A G+ I + ST Sbjct: 61 ILEKEKVDGVIHFAANSLVGESMSNPLKYYNNNVGGTESLLEALVETGVKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYS------- 152 + ++ PI E T P N YG++KLA E+ + ++ NYV LR V Sbjct: 121 YGEIATMPITEDMTTCPTNTYGETKLAIEKMLKWTHGAHNLNYVCLRYFNVAGADFSGTI 180 Query: 153 --IFGSNFLLSMLRL---AKERREISVVCDQFGTPTSALQIARAIIQI-------AHNLI 200 + L L L +R I+V + PT R I + L Sbjct: 181 GEAHTTETHLIPLILQVPLGQRSHITVFGQDY--PTEDGTCIRDYIHVTDLVNAHILALK 238 Query: 201 ENSDTSLRGIFHMTADGGPVSWADF---AEYI------FWESAERGGPYSKVYRIFTKQY 251 + IF++ ++ G S + A + R G + + I + + Sbjct: 239 YLMNGGESNIFNLGSNSGY-SVLEMIEAARKVTGHPIPMQIGERRVGDPALL--IASSE- 294 Query: 252 PTKAHR-----PAYSC 262 KA R P Y+ Sbjct: 295 --KAKRVLGWEPQYTA 308 >gi|315426139|dbj|BAJ47784.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 306 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 63/319 (19%), Positives = 111/319 (34%), Gaps = 55/319 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-------PDI-----DLLKPKDFA 43 LV G G I L +++ V+ GR PD+ D+ Sbjct: 5 NVLVTGGAGFIGGVLVKRLLENGVHVRVVDDFSTGRWENLPNSPDLKVFVHDVAVKHGLP 64 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 FF D +++ AA +V E + AF +N G + + G+ I ++ Sbjct: 65 DFFDKV--DAVVHLAAIPSVPMCERNVQRAFEVNVIGLENVLETCVEKGVGKIVFTSSAA 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTA-WVYSIFGSNFLLSM 162 G + ++E + T P ++YG +KL GE + S+ + + A +++++G + Sbjct: 123 VYGDAEGMLNEDAETRPFSVYGWTKLLGEAILRSFGEKHGVEAVALRIFNVYGRKSMSGF 182 Query: 163 LRL-------AKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 L + A E + + + D Q IA AI+ ++N + G Sbjct: 183 LGVVDQFIADAAEGKPLHIHGDGGQVRDFIHVDDIANAILLALEKTLKNFEVINIGT--- 239 Query: 214 TADGGPVSWADFAEYIFWESA----ERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 G P S + AE + ++V I YS D SK Sbjct: 240 ---GQPTSIKNLAEKVLTAFGHSVSAIVYEPARVGDI------------RYSVADISKAR 284 Query: 270 NTHNIRISTWKEGVRNILV 288 +T + L Sbjct: 285 QLLGFSPTT---SLDTYLA 300 >gi|223041543|ref|ZP_03611744.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor 202] gi|223017638|gb|EEF16048.1| dTDP-glucose 4,6-dehydratase [Actinobacillus minor 202] Length = 351 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 111/337 (32%), Gaps = 62/337 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGR---------------------PDIDLLK 38 K LV G G I +L + + + +I V + +D+ Sbjct: 3 KLLVTGGAGFIGSALIRYIISNTQDSVINVDKLTYAGNLESLEAVENNPRYAFEQVDICD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG------ 92 F + PD +++ AA + VD++ D N G + + A Sbjct: 63 KVALERVFNQYQPDAVMHLAAESHVDRSIDNAATFIETNIVGTYTLLEVARGYWNGLSEE 122 Query: 93 ----IPCIYISTDYVFDG--LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 ++ISTD V+ S++P E SP P + Y SK + + V ++ Y Sbjct: 123 RKSTFRFVHISTDEVYGDLEESQSPFREDSPYLPSSPYSASKASSDHLVRAWLRTYGLPT 182 Query: 143 VILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHN 198 ++ + Y F + M+ A E + + + + Q RA+ QI Sbjct: 183 IVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPIYGNGKQIRDWIFVEDHVRALYQILSK 242 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK---- 254 S S+ G + + + I +Y Sbjct: 243 GSIGSSYSIGGTNEKANID-----------VVRDICSLLEDLAPNKPIGVARYEDLIVYV 291 Query: 255 AHRPAYS---CLDCSKLANTHNIRI-STWKEGVRNIL 287 A RP + LD SK+ + T++ G+R + Sbjct: 292 ADRPGHDNRYALDTSKIRKELGWKPLETFETGLRKTV 328 >gi|15679777|ref|NP_276895.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] gi|2622920|gb|AAB86255.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter thermautotrophicus str. Delta H] Length = 336 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 60/317 (18%), Positives = 108/317 (34%), Gaps = 46/317 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI-------------D----------LLK 38 K LV G G I + +Q+ + + D + Sbjct: 3 KILVTGGAGFIGSNFIRYMLQEHPYHIINLDALTYCGNLENLRGVEDEPRYTFVRGSITD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIY 97 K D +IN AA + VD++ ++PEI N G + +A+ G I Sbjct: 63 RKLVDGIIKDV--DAVINFAAESHVDRSIEDPEIFIRTNILGTQTLLEASRKHGVERFIQ 120 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 ISTD V+ + E +P P + Y SK + + V +Y Y I R + Y Sbjct: 121 ISTDEVYGSAEKGYFTEETPLAPNSPYSASKASADLMVRAYHRTYGLPVNITRCSNNYGP 180 Query: 154 F--GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + + M+ A E + + V D + + + + ++ Sbjct: 181 YQFPEKLIPLMITNALENKPLPVYGDGM----NVRDWIHVLDHCRAVDLVLHRGRVGEVY 236 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 ++ + + I G + R F + P R Y+ D SK+ N Sbjct: 237 NIGGNSERRN-----IEIVELIVRELGKDESLIR-FVEDRPGHDRR--YAI-DASKIRNE 287 Query: 272 HNIRI-STWKEGVRNIL 287 + +++EG+R + Sbjct: 288 LGWKPLYSFEEGIRETI 304 >gi|283779730|ref|YP_003370485.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068] gi|283438183|gb|ADB16625.1| dTDP-4-dehydrorhamnose reductase [Pirellula staleyi DSM 6068] Length = 346 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 99/301 (32%), Gaps = 42/301 (13%) Query: 3 CLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPD-----------IDLLKPKDFASFFL 47 L+ G G L ++ V R D DL + F Sbjct: 12 LLLTGVAGVAGYNAFSYLRRRY--GDRVVAVRRTDNWPLALPGIVPCDLDDFEQVQRLFE 69 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + ++N + E +P +A +N + +A +++S D VF G+ Sbjct: 70 KYQFAAVLNCEGTCKLKSCELDPSMARRVNITSVENLLRAMRGTSTRLVHLSIDLVFSGV 129 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA- 166 I E + +P+ IYG + E+ + + + ILR + + + ++ + Sbjct: 130 GPGNIREDATPDPVTIYGSTMAEAEQLILTDKSEATILRISLPMGVSFNGHAGAIDWIQS 189 Query: 167 --KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 K+ R ++ D+ TPT + + ++ L G++H +S + Sbjct: 190 RFKKHRPATLYFDELRTPTYTDCLNPLLEEVLAR-------ELPGLYH-AGGTRRLSLYE 241 Query: 225 FAEYI-----FWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI-ST 278 A+ + + G + I R +D SKL + Sbjct: 242 IAQIVNRVGGYAPEHLMGCMRLEAGPIP--------PRAGDVTMDSSKLTAALGHQPFDP 293 Query: 279 W 279 W Sbjct: 294 W 294 >gi|257887057|ref|ZP_05666710.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257895622|ref|ZP_05675275.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|293377767|ref|ZP_06623956.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] gi|257823111|gb|EEV50043.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,141,733] gi|257832187|gb|EEV58608.1| UDP-glucose 4-epimerase [Enterococcus faecium Com12] gi|292643767|gb|EFF61888.1| UDP-glucose 4-epimerase [Enterococcus faecium PC4.1] Length = 329 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 108/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITENTPTNPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ ++ G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSNKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREILGWKP 304 >gi|86607290|ref|YP_476053.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] gi|86555832|gb|ABD00790.1| UDP-glucose 4-epimerase [Synechococcus sp. JA-3-3Ab] Length = 336 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 108/331 (32%), Gaps = 60/331 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI--------------IRVGRPDI-DLLKPKDFASF 45 M+ LV G G I + +R G +I D+ + Sbjct: 1 MRLLVTGGAGYIGSHTCKALAAHGHLPIAYDNLVYGHPWAVRWGPLEIGDIADRQRLDQV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 + P+ +I+ AAY V ++ +P + N G+ + +A GIP ++ ST + Sbjct: 61 IRQYRPEGVIHFAAYAYVGESVKDPGKYYRNNVAGSLTLLEAMRDHGIPYLVFSSTCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 + PI E P P+N YG+SKL E+ + + + I + Y Sbjct: 121 GVPEQIPIPETHPQRPINPYGQSKLVVEQMLRDFQTAHGIRFISLRYFNAAGADPDGEIG 180 Query: 152 SIFGSNFLLSMLRL---AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 L L L A +R I+V D + T +A+A + L Sbjct: 181 EAHDPETHLIPLVLEVAAGQRPHITVFGDDYDTLDGTCIRDYIHVADLAQAHVLALEALA 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 +++ G + + +A G V A RP Sbjct: 241 SGQPVQAA--YNLGNGQGFS-----VQEVIATAAAVTGRQIPVQ--------VGARRPGD 285 Query: 261 -SCL--DCSKLANTHNIRISTWKEGVRNILV 288 CL D + + N + + IL Sbjct: 286 PPCLVGDATAIQRDLNWQPRY--ADLAEILQ 314 >gi|332686111|ref|YP_004455885.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] gi|332370120|dbj|BAK21076.1| UDP-glucose 4-epimerase [Melissococcus plutonius ATCC 35311] Length = 329 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 115/319 (36%), Gaps = 58/319 (18%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + E+I + R + D+ + S Sbjct: 1 MSILVLGGAGYIGSHAVDQLITKGYEVIVIDNLQTGHREAVNDQAIFYQGDIRDKEFLKS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + + II+ AA + V ++ ++P + F+ N G + + G ++ ST Sbjct: 61 VFKKENIEGIIHFAANSLVGESVEKPLMYFNNNVYGMQILLEVMQEFGVKKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + TPI E +PTNP N YG+SKL E+ + +Y ++V LR V + + Sbjct: 121 YGEPKETPIKETTPTNPTNPYGESKLMMEKMMKWCDGAYGMHFVALRYFNVAGAKKNASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDT 205 + R +++ + + T T IA +++ Sbjct: 181 GEDHHPETHLIPIVLQVASGTRDVLNIYGNDYPTIDGTCVRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK--AHRPAY 260 G +F++ ++ G + I + E + K+ P K A R Sbjct: 241 ENGGKSDVFNLGSNTGYS-----VKEILEAARE----------VTKKEIPAKIVARRSGD 285 Query: 261 -SCL--DCSKLANTHNIRI 276 S L K + Sbjct: 286 PSTLVASSEKAKQILGWQP 304 >gi|289163579|ref|YP_003453717.1| dTDP-4-dehydrorhamnose reductase [Legionella longbeachae NSW150] gi|288856752|emb|CBJ10563.1| putative dTDP-4-dehydrorhamnose reductase [Legionella longbeachae NSW150] Length = 292 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 105/299 (35%), Gaps = 44/299 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGRP-----------------DIDLLKPK 40 MK LV+G G + ++ Q D E+ R D D+L Sbjct: 1 MKILVLGITGMLGSAVFHTFNQQQNDFEVWGTLRSREGLNYFPNGVHPYLISDTDVLNLD 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 P+V+IN + +P A +NA +A+ G I+IST Sbjct: 61 ALCKVLEQVRPNVVINCVGLIKQLSSAKDPLSALPVNAMLPHQLARLCQLAGARLIHIST 120 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VF G E ++ ++YGKSK GE + ++N + LRT+ + F S L Sbjct: 121 DCVFSGKK-GFYTENDNSDAEDLYGKSKFIGE---ITESSNAITLRTSIIGHEFNSKSAL 176 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L++E + + + ++AR + L G++H+ A P+ Sbjct: 177 VEWFLSQEL-SVKGYVNAIFSGLPTFELARVMRDYVI-----PKPELSGLYHVAAT--PI 228 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + I + + I ++ R L+ + N W Sbjct: 229 NKYELLSLIAEVYKK------NINIIADEEL-----R-IDRSLNGERFKNATGYVAPDW 275 >gi|168183156|ref|ZP_02617820.1| UDP-glucose 4-epimerase [Clostridium botulinum Bf] gi|237796215|ref|YP_002863767.1| UDP-glucose 4-epimerase [Clostridium botulinum Ba4 str. 657] gi|182673724|gb|EDT85685.1| UDP-glucose 4-epimerase [Clostridium botulinum Bf] gi|229262749|gb|ACQ53782.1| UDP-glucose 4-epimerase [Clostridium botulinum Ba4 str. 657] Length = 326 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 115/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAILVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVYGTLSLLETMKEHNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 R+ R +I + D + T + + A I L Sbjct: 181 EAHRVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCIRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ ++ +++ G + + + G + I ++ A R Sbjct: 241 RDNTSA---TYNLGNGEGFS-----VKEVIDICRKVTG-----HAIPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ K + +I+ Sbjct: 285 PA--ILIASSEKIIKELGWNPK--KASLESII 312 >gi|222056005|ref|YP_002538367.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] gi|221565294|gb|ACM21266.1| NAD-dependent epimerase/dehydratase [Geobacter sp. FRC-32] Length = 328 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 95/261 (36%), Gaps = 43/261 (16%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEII--------------------------RVGRP- 32 M+ L+ G G I L+ + + +II GR Sbjct: 1 MRILITGGAGFIGSHLAERLFLCGHDIIIVDNFNDFYSPAVKRRNFTETAGNAAACGRRL 60 Query: 33 ---DIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 + D+ + + F PD +I+ AA V + D P + +N G + +AA Sbjct: 61 LLCEGDIRDEEFIRAIFTQELPDAVIHLAAAAGVRPSIDNPLLYEEVNVRGTMNLLEAAK 120 Query: 90 SIGIPC-IYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVI--- 144 +IG+ ++ S+ V+ + P E P NP++ Y +K AGE +Y + Y I Sbjct: 121 AIGVRLFLFASSSSVYGNNPKVPFAEADPVDNPISPYAATKKAGELICHTYHHLYDINIA 180 Query: 145 -LRTAWVYSIFGSNFL--LSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNL 199 LR VY L +RL ++ + I D + T I I + + Sbjct: 181 CLRFFTVYGPRQRPDLAISKFVRLIEQGKPIPFYGDGSTSRDYTYIGDIVAGIEKALQWV 240 Query: 200 IENSDTSLRGIFHMTADGGPV 220 N+ IF++ Sbjct: 241 --NTGEKRYDIFNLGGSSPVA 259 >gi|212550138|gb|ACJ26790.1| dTDP-4-dehydrorhamnose reductase (L-QuiNAc synthase) [Salmonella enterica subsp. salamae] Length = 289 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 112/306 (36%), Gaps = 49/306 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKDF 42 K L++G NG + SL E++ R ++D K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGGYEVLGTTRNIVVAEQLEQKLNVKIIDNVDATDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 S P++++N A ++ IN+ +A+ + I+ STD Sbjct: 64 ESVVEEHKPNIVLNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHNAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G E ++ +++YGKSK GE + ++ LRT+ + GSN L Sbjct: 124 IFKGTKGN-YVEDDESDAIDLYGKSKFLGEVGY----DGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L+++ ++ + + PT + ++ H + ++ S G+FH++ D P+ Sbjct: 179 WFLSQKN-SVTGFTNAIFSGLPTCY------MAEVIHKYVLPNNLS--GLFHLSVD--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S D + G + T + + R S L N +W Sbjct: 228 SKYDL----LNIIKKVYGKNIDIKP--TDDF--RIDRSLNSTL----FRNKTIFAPESWT 275 Query: 281 EGVRNI 286 + + + Sbjct: 276 KLIEKM 281 >gi|225851526|ref|YP_002731760.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] gi|225646301|gb|ACO04487.1| UDP-glucose 4-epimerase [Persephonella marina EX-H1] Length = 324 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 101/297 (34%), Gaps = 51/297 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVG-----RPD---------IDLLKPKDFASF 45 MK L+ G G I + + + EI+ + + IDL Sbjct: 1 MKVLITGGAGYIGSHIVKVLGEKKYEILVIDNLSKGHKEAVIYGDLVVIDLKNKTALEDI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F F PD +++ AA V ++ +P + N + + G I+ ST V+ Sbjct: 61 FKRFKPDAVMHFAASIEVGESVKKPLKYYQNNTANTLNLLETMLEYGVNKFIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------S 152 + PI E P NP+N YG+SK E+ + + + + Y Sbjct: 121 GTPVKVPIPEDHPINPINPYGQSKSFIEKVLQDLDRSSGLKYISLRYFNAAGADPEGRIG 180 Query: 153 IFGS---NFLLSMLRLAK-ERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + + +L+ AK ER I + + TP +A A + L+ Sbjct: 181 ESHDPETHLIPLILKTAKGERESIKIFGTDYPTPDGTCIRDYIHVDDLADAHLLALEYLL 240 Query: 201 ENSDTS--LRGIFHMTADGGPVSWADFAEYI------FWESAERGGPYSKVYRIFTK 249 ++ G H + ++ A+ + E+ R G + TK Sbjct: 241 NGGESEVFNCGYGHGYSVREVIN---TAKKVTDIDFKVEEADRRPGDPPVLVADSTK 294 >gi|312793329|ref|YP_004026252.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180469|gb|ADQ40639.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 305 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 108/308 (35%), Gaps = 55/308 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIERGYDVCIVDNLLSGNVCNINPKAKFYQLDIRD--NLEK 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + I+ S+ V Sbjct: 59 VFEENKIEYCIHQAAQVSVAKSMEDAYLDCSINVLGTVNLLDYCAKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNF- 158 + PIDE P P + YG SKL EE + + +N Y+I R + VY F Sbjct: 119 YGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRYSNVYGPRQDPFG 178 Query: 159 ----LLSMLRLAKERREISVVCD--QFGTPTSALQIARA-IIQIAHNLIENSDTSLRGIF 211 + + + + + D Q +A A + + +TS+ G F Sbjct: 179 EGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEANCVAL--------ETSVSGTF 230 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 +++ G VS + I S G S VY+ RP A+SCL + L Sbjct: 231 NLS-TGKNVSVNEL-FEIL--SGLTGYKKSPVYQP---------KRPGDIAHSCLSNNLL 277 Query: 269 ANTHNIRI 276 + Sbjct: 278 KSVLGFSP 285 >gi|159042009|ref|YP_001541261.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920844|gb|ABW02271.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 311 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 115/320 (35%), Gaps = 44/320 (13%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEI-----IRVGRPD-------------IDLLKPKD 41 MK L+ G G I L + + ++ + GR + DL +D Sbjct: 1 MKALITGGAGFIGSHLVDKLLARGYQVKVIDNLSTGRIENITHVLNKIQFTKTDLKNIED 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 DVI + AA V + PE+ F+ N + +A + + ++ S+ Sbjct: 61 TLKALKDT--DVIFHFAANPEVRVSTVSPEVHFNENVVATFNLLEAMRRMDVREIVFASS 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGS 156 V+ P+ E +PT P+++YG SK A E + +Y+ VILR A V + Sbjct: 119 SSVYGEPEEIPVSEDAPTRPVSVYGASKAACENLIHAYSRLYGMKAVILRYANVVGLRLR 178 Query: 157 NFLLSML--RLAKE--RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ L +L K+ R E+ Q + A LI + T G +H Sbjct: 179 HGVIYDLIMKLRKDPTRLEVLGDGTQVRSYIHVDDAVEAT------LIAHERTG--GGYH 230 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVY-RI-FTKQYPTKAHRPAYSCLDCSKLAN 270 + W E + + E G ++ I +P R L +L Sbjct: 231 VFNVASE-DWITVDEVVNIITEELGAKPEIIHKPILHGVGWPGDVKR---IALRIDRLRE 286 Query: 271 THNIRISTWKEGVRNILVNI 290 KE VR + + Sbjct: 287 LGFKPRMNSKEAVRVTVKAL 306 >gi|187778646|ref|ZP_02995119.1| hypothetical protein CLOSPO_02241 [Clostridium sporogenes ATCC 15579] gi|187772271|gb|EDU36073.1| hypothetical protein CLOSPO_02241 [Clostridium sporogenes ATCC 15579] Length = 326 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 115/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAVLVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F+ D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FVQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEHNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTGPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 ++ R +I + D + T + + A I L Sbjct: 181 EAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ ++ +++ G + + + G I ++ A R Sbjct: 241 RDNTSA---TYNLGNGEGFS-----VKEVIEICRKVTGHI-----IPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ + K + I+ Sbjct: 285 PA--ILIASSEKIIKELGWKPK--KASLERII 312 >gi|322436339|ref|YP_004218551.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] gi|321164066|gb|ADW69771.1| UDP-glucose 4-epimerase [Acidobacterium sp. MP5ACTX9] Length = 322 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 95/314 (30%), Gaps = 51/314 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGR---------------PDIDLLKPKDFAS 44 MK LV G G I ++S + ++ E+ + DL Sbjct: 1 MKILVTGGAGYIGGTVSRLLLERGHEVTVFDSLCHSRRSAIAEGVTFVEGDLADSALLEK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 + D +++ AA ++ +PE+ F N G + +A + G ++ ST Sbjct: 61 TLNAGKFDGVLHFAALIEAGESMKQPEVYFRNNTAGTLTLLEAMLATGHNKLVFSSTAAC 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-----------S 152 + +TPI E + P N YG+SKL E + +++ + A Y Sbjct: 121 YGEPEKTPITEEARLAPTNAYGESKLLSEHMMRWMHHSHGLRYAALRYFNVAGAIPGYGE 180 Query: 153 IFGSNFLLSMLRL---AKERREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENSDT 205 L L L R I + + TP T + + + Sbjct: 181 NHEPESHLIPLVLDVALGRRASIKIFGQDYPTPDGTCVRDYVHVQDLADAHLLALAALED 240 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL- 263 I+++ + G + G V RP + L Sbjct: 241 KAPLIYNLGSGTGFT-----VLEVIESVRRVTGKEIPVELCP--------RRPGDPAVLV 287 Query: 264 -DCSKLANTHNIRI 276 K+ + Sbjct: 288 ASSEKIQQELGWKP 301 >gi|312877249|ref|ZP_07737217.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] gi|311795963|gb|EFR12324.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor lactoaceticus 6A] Length = 305 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 108/308 (35%), Gaps = 55/308 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIERGYDVCIVDNLLSGNVCNINPKAKFYQLDIRD--NLEK 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + I+ S+ V Sbjct: 59 VFEENKIEYCIHQAAQVSVAKSMEDAYLDCSINVLGTVNLLDYCAKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNF- 158 + PIDE P P + YG SKL EE + + +N Y+I R + VY F Sbjct: 119 YGEPEYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRCSNVYGPRQDPFG 178 Query: 159 ----LLSMLRLAKERREISVVCD--QFGTPTSALQIARA-IIQIAHNLIENSDTSLRGIF 211 + + + + + D Q +A A + + +TS+ G F Sbjct: 179 EGGVVSIFCERMQSSKNVIIFGDGTQTRDFIYVEDVAEANCVAL--------ETSVSGTF 230 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 +++ G VS + I S G S VY+ RP A+SCL + L Sbjct: 231 NLS-TGKNVSVNEL-FEIL--SGLTGYKKSPVYQP---------KRPGDIAHSCLSNNLL 277 Query: 269 ANTHNIRI 276 + Sbjct: 278 KSVLGFSP 285 >gi|193213768|ref|YP_001994967.1| UDP-glucose 4-epimerase [Chloroherpeton thalassium ATCC 35110] gi|193087245|gb|ACF12520.1| UDP-glucose 4-epimerase [Chloroherpeton thalassium ATCC 35110] Length = 329 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 94/319 (29%), Gaps = 59/319 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRPDI---------DLLKPKDFASF 45 M L+ G G I Q + + G + DL K Sbjct: 1 MTVLITGGAGYIGSHAVRRLKQAGYKTLVLDNLVYGHSEFVEADELIIGDLENTKLLNQV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F +++ AAY V ++ P + N + A + I+ ST + Sbjct: 61 FSKHKIQAVMHFAAYAYVGESVQNPAKYYRNNVASTLNLLDAMLAYKVKKFIFSSTCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SIF 154 PI E P P+N YG+SKL E+ + Y + Y + Y I Sbjct: 121 GEPDEIPITETHPQRPINPYGQSKLMVEKILDDYDHAYDLRSVRLRYFNAAGADPDGGIG 180 Query: 155 GSNFLLSML------RLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 + + L + R IS+ + TP T +A + Sbjct: 181 EDHDPETHLIPLVLDAALERRAHISMFGTDYDTPDGTCVRDYIHVT-DLAEAHVLGLK-- 237 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR----IFTKQYPTK-AHR---- 257 +GG DF F G +V I K+ P K A R Sbjct: 238 ------YLENGGKT---DF----FNLGNGNGFSVKEVIETARKITGKEIPAKIAPRRPGD 284 Query: 258 PAYSCLDCSKLANTHNIRI 276 PA K+ + + Sbjct: 285 PASLVGSSEKIKSALGWKP 303 >gi|315427552|dbj|BAJ49152.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 318 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 98/303 (32%), Gaps = 28/303 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVI 54 MK L+ G+ G + + L + ++ +D+ F + + Sbjct: 14 MKVLITGSEGFVGRHLREYLGGRGYVVVGADISSGADIRMDVTDFDSVLKTFEQNRFEAV 73 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRTPID 113 ++ AA + + +P F +N G+ + +AA + S+ + + P+ Sbjct: 74 VHLAAVADIPLSMRDPHRCFKVNVYGSLNVLEAARRIGVRRVVVFSSANYYGAPVKLPVT 133 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV----YSIFGSNFLLSMLR----L 165 E +P NP Y SK+A E SY N+ + T + + + L Sbjct: 134 EDTPPNPRTPYDYSKVALENVAWSYHRNHGVPITVLRPWKAFGEYEPGEKMVPRFVKACL 193 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 A E + P + A+ + G G +S + Sbjct: 194 ASEPIPLFNGGADVTDPYHVDNLCHAVELGLIKDEAVGEAFNVGT------GNALSVREL 247 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS-TWKEGVR 284 AE I + + R + P K S K+A + ++G++ Sbjct: 248 AEKIKQLTNSSSKLETLPPRTPAEATPMK------SIPSIKKIATKLGYTPQVSLEQGLK 301 Query: 285 NIL 287 ++ Sbjct: 302 RVI 304 >gi|257898211|ref|ZP_05677864.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] gi|257836123|gb|EEV61197.1| UDP-glucose 4-epimerase [Enterococcus faecium Com15] Length = 329 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 108/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PT+P N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITENTPTDPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ ++ G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSNKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREILGWKP 304 >gi|308070546|ref|YP_003872151.1| UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] gi|305859825|gb|ADM71613.1| Putative UDP-glucose 4-epimerase [Paenibacillus polymyxa E681] Length = 311 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 110/319 (34%), Gaps = 57/319 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG-RPDIDLL--KPKDF-----------ASF 45 MK LV G G I L + + + ++ P+ + Sbjct: 1 MKALVTGGAGFIGSQLVRALADSGIRVHVLDNLTTGNITNVDPRAVMHIADIRSSEARTL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 + SPD++ + AA V ++ P+ +N G + +A G I+ ST V+ Sbjct: 61 LIRESPDIVFHLAAQADVQQSIHRPDEDADVNVLGTIHLLQACHEAGVSKFIFASTSGVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS---- 156 L + I E P P++ YG SKL E + + NY ILR VY + Sbjct: 121 GELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTILRYGNVYGPGQAAKGE 180 Query: 157 -NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + + K+ + + D Q + RA + H + + H+ Sbjct: 181 GGVVALFMERLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAIH-------AADQRTVHV 233 Query: 214 TADGGPVSWADFAEYIFWESAERGGPY-SKVYRIFTKQYPTKAHRPAYSCLDCS------ 266 + G + I + + + S V +++ P +A +SCL + Sbjct: 234 S--TGRTT------SINRLAYDLLKLHGSSVRPVYS---PARAGDIHHSCLSNAVARHWL 282 Query: 267 KLANTHNIRISTWKEGVRN 285 + + I G+R Sbjct: 283 RWEPLYGIS-----AGLRE 296 >gi|170761307|ref|YP_001788095.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] gi|169408296|gb|ACA56707.1| UDP-glucose 4-epimerase [Clostridium botulinum A3 str. Loch Maree] Length = 326 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 95/258 (36%), Gaps = 43/258 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAVLVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVYGTLSLLETMKEHNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLRWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 R+ R +I + D + T + + A I L Sbjct: 181 EAHRVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGG 218 ++ ++ +++ G Sbjct: 241 RDNTSA---TYNLGNGEG 255 >gi|220925352|ref|YP_002500654.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] gi|219949959|gb|ACL60351.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] Length = 349 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 110/338 (32%), Gaps = 67/338 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 M+ LV G G I +L VQ +++ + + D+ Sbjct: 1 MRILVTGGCGFIGSALVLHLVQERGHDVLTLDALTYAANPLSLQPLRDDPRHRFAEADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 P+ + F F P +++ AA + VD++ P N G + +AA + Sbjct: 61 DPERVNALFEEFQPQAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHSTRLSD 120 Query: 96 --------IYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +++STD V+ E S +P + Y SK A + ++ Y Sbjct: 121 GAKQAFRFLHVSTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 ++ + Y F + M+ A E + + V D AR ++ + Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKPLPVYGDGQNERDWIHVEDHARGLVAVLEG 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFA-----EYIFWESAERGGPYSKVYRIFTKQYPT 253 + + GG ++ IF GP+ ++ T Sbjct: 241 GRIGE------TYLL---GGRAVRSNLEVVKTLCAIFDRLRPEAGPHERLITFVTD---- 287 Query: 254 KAHRPAYSC---LDCSKLANTHNIRI-STWKEGVRNIL 287 RP + +D K R ++++ + + + Sbjct: 288 ---RPGHDRRYAIDPGKAERELGWRPTRSFEQALEDTV 322 >gi|78183669|ref|YP_376103.1| dTDP-4-dehydrorhamnose reductase-like [Synechococcus sp. CC9902] gi|78167963|gb|ABB25060.1| dTDP-4-dehydrorhamnose reductase-like [Synechococcus sp. CC9902] Length = 288 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 61/290 (21%), Positives = 108/290 (37%), Gaps = 33/290 (11%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD-----IDLLKP-KDFASFFLSFSPDVII 55 LVIG+ G + S + + + ++ + R IDLL + + +I Sbjct: 2 ILVIGSTGMLGSSYVRHLSLNNIPYHTISRNIGSSYCIDLLHSFAEIEKLIIDNKYSAVI 61 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 N AA ++D E P +A +N++ +A + +G ++ISTD+ F G E Sbjct: 62 NCAAIVSLDYCERFPSLAMRVNSDLVLCLASICEKVGSILMHISTDHFFSGDGNYLHPED 121 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-SIFGSNFLLSMLRLAKERREISV 174 P N Y SK GE + N V+ Y + S F+ +L I + Sbjct: 122 HPIVINNNYAYSKHLGELNALKFPNTIVLRTNVTGYRNGSSSTFIEWLLFSLMNNEPIIL 181 Query: 175 VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYI----- 229 D F TS + HN + + RG+ +++++ +S +F + Sbjct: 182 FDDFF---TSTIDAD----CFVHNSLLLLECEFRGLLNLSSNQ-CISKYEFGLELSNFLN 233 Query: 230 FWESAERGGPYSKVYRIFTKQYPTKAHRPAYS-CLDCSKLANTHNIRIST 278 + G K+ R + S LDCS + + + Sbjct: 234 LDFTNVSIGSVVKLLP-----------RRSNSLGLDCSFIESILKKNMPD 272 >gi|161527676|ref|YP_001581502.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338977|gb|ABX12064.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 308 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 33/264 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------------GRPDI---DLLKPKD 41 MK LV G G I + L + E+I + + DL Sbjct: 1 MKILVTGGAGFIGRHLIKKINKKHELIIFENFSNSDEKNISYLLNDKTKLVKGDLTDFSL 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYIST 100 S + D++I+ AA + ++ + P+ IN EG+ + +A + I S+ Sbjct: 61 INSSLSNV--DLVIHLAAKIDILQSIEHPDQTHKINVEGSLNLLRACVKNNVKNFIAASS 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGS 156 V+ + P+ EF+ NP++ YG K+A E + ++ N Y I LR VY + S Sbjct: 119 AAVYGNPKQIPVTEFTIPNPVSPYGADKIALEFYLRAFCNAYGINGIALRFFNVYGLGQS 178 Query: 157 N----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 N + L + + + + D T ++ I N +++ Sbjct: 179 NAYAGVITKFLNQIHQTKPLRIFGDGKN--TRDFIHIDDLVMGIEQSISNISGKRGSVYN 236 Query: 213 MTADGGPVSWADFAEYIFWESAER 236 + A G VS + A+ + S ++ Sbjct: 237 L-ASGKSVSVKELAKLMLEISDKK 259 >gi|209515363|ref|ZP_03264229.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] gi|209504083|gb|EEA04073.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160] Length = 329 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 100/314 (31%), Gaps = 55/314 (17%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRP------------------DIDLLKPKDF 42 K LV G +G + + ++ + ++ DL + Sbjct: 3 KILVTGASGWLGTEIVKALLARGDAVVGTDIAISPGTAASVARQPKFTAVAADLCEWPQV 62 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTD 101 PD +I+ AA V + D P A +N EG+ + +A G +++ST+ Sbjct: 63 LRLMEQHRPDAVIHAAAIVGVIQCADIPIKANRVNVEGSLNLFEAMRLTGVKRVVHVSTE 122 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS- 156 + + IDE NP ++YG +KLA E YT + + +RT WVY Sbjct: 123 ETYGDFNAPLIDEEHAQNPTSVYGATKLAVEHYGRIYTREHGLECLNVRTCWVYGPHLPR 182 Query: 157 -NFLLSMLRLAKERREISVVC------DQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + + A + DQ ++ + + D+ Sbjct: 183 LRVPRTYVEAALRGEVLHDPDGADFAVDQ----VYVDDTVAGLLLVLDKPVHRYDS---- 234 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-----PTKAHRPAYSCLD 264 +++ P AD A + R P +++ Y A LD Sbjct: 235 -YNIATGTAPT-IADIAAAV-----NRAIPGARISVGSRGPYRHGGKVLSAK---KGALD 284 Query: 265 CSKLANTHNIRIST 278 S+ Sbjct: 285 ISRARAELGYEPRY 298 >gi|226357047|ref|YP_002786787.1| dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] gi|226319037|gb|ACO47033.1| putative dTDP-4-dehydrorhamnose reductase [Deinococcus deserti VCD115] Length = 250 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 36/248 (14%) Query: 25 EIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAI 84 I+ ++D+ P+VI++ AAYT V AE++ E + +N EG + Sbjct: 25 NIVAPSSRELDVTNSAQVLEMVWCKRPEVIVHAAAYTNVGGAEEDRETCWRVNVEGTRHM 84 Query: 85 AKAADSIGIPCIYISTDYVFDGLSRTPIDEFS-PTNPLNIYGKSKLAGEEKVASYTNNYV 143 A+AA+ +G + ISTDYVF G ++ E P P+N Y +KL EE + ++ Sbjct: 85 AQAANEVGAKLVQISTDYVFSG-AQGDYRETDIPGPPVNYYALTKLVAEEAARTA-GQHL 142 Query: 144 ILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 I+RT++ F S + ++ IA + + + +E Sbjct: 143 IVRTSFRPREFQYPVAFSDVYTGQD---------------YVDIIAPLVAEAVLHALEIP 187 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 D+ + H+ + S D A A R G + V PA L Sbjct: 188 DS----VLHIVTE--RKSVFDLARR--RNPAVREGRRADVT----------VPLPADVSL 229 Query: 264 DCSKLANT 271 + + Sbjct: 230 NTDRWQAL 237 >gi|300855349|ref|YP_003780333.1| UDP-glucose 4-epimerase [Clostridium ljungdahlii DSM 13528] gi|300435464|gb|ADK15231.1| UDP-glucose 4-epimerase [Clostridium ljungdahlii DSM 13528] Length = 328 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 104/313 (33%), Gaps = 51/313 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG--------------RPDIDLLKPKDFASF 45 M LV G G I + + +++ E+I + + DL Sbjct: 1 MAILVCGGAGYIGSHMIAELLENKKEVIVLDNFEKGHRSAILGGKVYEGDLRDDNILDRV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-IYISTDYVF 104 F + +I+ AAY+ V ++ DEP F N G + KA + ++ ST + Sbjct: 61 FEENQIEAVIDFAAYSLVGESVDEPLKYFDNNVGGTLNLLKAMRKHNVKYVVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E + T P N YG+SKL E+ + Y I A Y + + Sbjct: 121 GEPKSIPILENAVTYPTNPYGESKLTVEKILKWSDRAYGIKYAALRYFNAAGAHVNGTIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS--- 203 R K+R +I + D + T T +L+ + Sbjct: 181 EDHRPETHLIPIILQVALKKRDKIFIFGDDYNTEDGTCVRDYVHVTDLANAHLLALNKIM 240 Query: 204 DTSLRGIFHMTADGG-------PVSWADFAEYIFWESAERGGPYSKVYRIFT----KQYP 252 + I+++ G VS E I E A R V + + Sbjct: 241 KENESKIYNLGNGKGFSVKEVIEVSRKVTGEKIEAEIAPRRQGDPAVLVASSKKAQDELG 300 Query: 253 TKAHRPAYSCLDC 265 K P Y+ L+ Sbjct: 301 WK---PKYNSLEN 310 >gi|307153797|ref|YP_003889181.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] gi|306984025|gb|ADN15906.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7822] Length = 342 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 112/332 (33%), Gaps = 62/332 (18%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RPDI------------DLLKPKDFAS 44 LV G G I ++ ++ +I + D+ D+ Sbjct: 8 ILVTGGAGYIGSHAVQALQKAGYSVIILDNLVYGHRDLVEKVLQVELIQGDISDRALLDD 67 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYV 103 F +S +++ AAY V ++ P + + N G + +A + ++ ST Sbjct: 68 LFKRYSIAAVMHFAAYIFVGESVTNPAMYYRNNVVGTLTLLEAMVAANVKKIVFSSTCAT 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + P+ E P NP+N YG +KL E+ +A + + Y + + Y Sbjct: 128 YGVPQFMPLTEDHPQNPINPYGHTKLMVEKILADFDHAYGLKSVCFRYFNAAGADPSGQL 187 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L +L +R ISV + TP + +A A + L Sbjct: 188 GEDHQPETHLIPLILLAALGQRESISVFGTDYPTPDGTCIRDYIHVVDLADAHVLGLEYL 247 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 +E +++ F++ G + + + G KV +A P Sbjct: 248 LEGGESNA---FNLGNGNGFS-----VKEVIETARVVTGKPIKVVECE-----RRAGDPP 294 Query: 260 YSCL--DCSKLANTHNIRISTWKEGVRNILVN 289 L +K + ++ ++NI+ + Sbjct: 295 --VLVGSSAKAKTVLGWKPQYYE--LKNIIAH 322 >gi|41033611|emb|CAF18472.1| dTDP-D-glucose-4,6-dehydratase [Thermoproteus tenax] Length = 320 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 73/313 (23%), Positives = 118/313 (37%), Gaps = 44/313 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPD-----------IDLLKPKDFA 43 M+ VIG G + + E++ GR + D+ + Sbjct: 1 MRVAVIGGAGFMGSNFVRHMAGRGEVLVYDKLTYAGRLENLRGVEVEFVRGDVANFELLF 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F PDV++N AA T VD++ ++P + N G ++ +AA +G ++ISTD V Sbjct: 61 YVLSRFRPDVVVNFAAETHVDRSINDPAPFLTTNVWGVHSVLEAARKLGFLYVHISTDEV 120 Query: 104 FDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 + L+ DE P P + Y SK AG+ V +Y Y I+R Y F Sbjct: 121 YGDLASGGEADESWPMRPSSPYSASKAAGDLLVQAYGRTYGVRFRIVRPCNNYGPFQHPE 180 Query: 158 --FLLSMLRLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 +++RL R I Q RA+ + ++ GI+++ Sbjct: 181 KLIPRTIVRLLLGRPATIYGDGRQVRDWLYVGDFVRALEVVIERGVDG------GIYNVC 234 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 A G P S + E I ++ GG V + A R C KL Sbjct: 235 A-GQPASVREVVERI---ASALGGSVKYVRGRPGEDM-RYAMR-------CDKLRGLGWR 282 Query: 275 RISTWKEGVRNIL 287 + +EG+R + Sbjct: 283 PEVSLEEGLRRTV 295 >gi|332652994|ref|ZP_08418739.1| UDP-glucose 4-epimerase [Ruminococcaceae bacterium D16] gi|332518140|gb|EGJ47743.1| UDP-glucose 4-epimerase [Ruminococcaceae bacterium D16] Length = 330 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 56/317 (17%), Positives = 106/317 (33%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I + + +++ R +D+ Sbjct: 1 MAILVLGGAGYIGSHTVYELIDAGRDVVVADNLLTGFRAAVHPKARFYQLDIRDRSALDE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ +P + N G + +A + G ++ ST Sbjct: 61 LFTKEKIEGVIHFAASSQVGESMSDPLKYYDNNLHGTMVLLQAMVAHGVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + R PI E T+P N YG++KLA E + + + + A Y Sbjct: 121 YGEPERVPILETDRTDPTNCYGETKLAMEHMMRWVSRAHGLKYVALRYFNACGAHPSGAI 180 Query: 152 -SIFGSNFLLSMLRLA---KERREISVVCDQFGT--------PTSALQIARAIIQIAHNL 199 L L L +R +IS+ D + T +A+A I +L Sbjct: 181 GEAHNPETHLIPLILQVPNGQREKISIFGDDYPTKDGTCIRDYIHVSDLAQAHILALDHL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 ++ ++ +F++ G + + + G + I + P +A PA Sbjct: 241 LQGGESD---VFNLGNGVGFT-----VKEVIDVARAVTG-----HPIPAETCPRRAGDPA 287 Query: 260 YSCLDCSKLANTHNIRI 276 K + Sbjct: 288 QLIASSKKAVEQLGWKP 304 >gi|226950191|ref|YP_002805282.1| UDP-glucose 4-epimerase [Clostridium botulinum A2 str. Kyoto] gi|226841716|gb|ACO84382.1| UDP-glucose 4-epimerase [Clostridium botulinum A2 str. Kyoto] Length = 326 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 114/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAILVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 ++ R +I + D + T + + A I L Sbjct: 181 EAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ + +++ G + + + G + I ++ A R Sbjct: 241 RDNTSD---TYNLGNGEGFS-----VKEVIDICRKVTG-----HAIPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ K + +I+ Sbjct: 285 PA--ILIASSEKIIKELGWNPK--KASLESII 312 >gi|153939052|ref|YP_001392057.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. Langeland] gi|170755731|ref|YP_001782385.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] gi|152934948|gb|ABS40446.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. Langeland] gi|169120943|gb|ACA44779.1| UDP-glucose 4-epimerase [Clostridium botulinum B1 str. Okra] gi|295320069|gb|ADG00447.1| UDP-glucose 4-epimerase [Clostridium botulinum F str. 230613] gi|322807090|emb|CBZ04664.1| UDP-glucose 4-epimerase [Clostridium botulinum H04402 065] Length = 326 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 114/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAILVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 ++ R +I + D + T + + A I L Sbjct: 181 EAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ + +++ G + + + G + I ++ A R Sbjct: 241 RDNTSD---TYNLGNGEGFS-----VKEVIDICRKVTG-----HAIPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ K + +I+ Sbjct: 285 PA--ILIASSEKIIKELGWNPK--KASLESII 312 >gi|168180814|ref|ZP_02615478.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] gi|182668202|gb|EDT80181.1| UDP-glucose 4-epimerase [Clostridium botulinum NCTC 2916] Length = 326 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 113/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAILVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 ++ R +I + D + T + + A I L Sbjct: 181 EAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ + +++ G + + + G I ++ A R Sbjct: 241 RDNTSD---TYNLGNGEGFS-----VKEVIDICRKVTG-----NAIPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ K + +I+ Sbjct: 285 PA--ILIASSEKIIKELGWNPK--KASLESII 312 >gi|116493213|ref|YP_804948.1| UDP-galactose 4-epimerase [Pediococcus pentosaceus ATCC 25745] gi|116103363|gb|ABJ68506.1| UDP-galactose 4-epimerase [Pediococcus pentosaceus ATCC 25745] Length = 330 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 103/299 (34%), Gaps = 57/299 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV+G G I + V+ + +++ V + D+ Sbjct: 1 MSILVVGGAGYIGSHMVKRLVEQNRDVVVVDNLSTGHRGAVDKGVKFYEGDIRDHAFLKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +++ AA++ V ++ ++P F N G A+ + I+ ST Sbjct: 61 VFDQEAIDTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMRDHDVKRIIFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + ++PI+E P+N YG+SKL E+ + Y I A Y + + Sbjct: 121 YGVPEKSPIEETDRQAPINPYGESKLMMEKIIKWADQAYGIKFVALRYFNVAGAYPDGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R ++ + D + TP T+ + +A I D Sbjct: 181 GEDHGPETHLTPIILQVALGKRDQLQIFGDDYHTPDGTNVRDYVHVL-DLADAHILAIDY 239 Query: 206 SLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTK--AHRP 258 G +F++ + G F+ E+A + P K A RP Sbjct: 240 LKAGNDSDVFNLGSSTG------FSVKEMVEAAREA---------TGEAIPAKIAARRP 283 >gi|238855447|ref|ZP_04645757.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|260665167|ref|ZP_05866016.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|282933045|ref|ZP_06338435.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|313472733|ref|ZP_07813221.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|238831937|gb|EEQ24264.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 269-3] gi|239529295|gb|EEQ68296.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 1153] gi|260560904|gb|EEX26879.1| UDP-glucose 4-epimerase [Lactobacillus jensenii SJ-7A-US] gi|281302803|gb|EFA95015.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M+ LV G G I + ++D +++ + R + D+L + Sbjct: 1 MRVLVTGGAGYIGSHTVNALLEDGNDVVVLDNLYTGHRQAVNKKAKFYHGDVLDTSLVTN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + D +I+ AAY V ++ EP + N G ++ KA + G+ ++ S+ Sbjct: 61 ILMDEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVKNLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E +PTNP+N YG++KL E+ + I A Y Sbjct: 121 YGIPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDKADGIKSIALRYFNVAGASLDASI 180 Query: 152 --SIFGSNFLLSMLRLAKERRE--ISVVCDQFGTP--TSALQIARAI 192 L+ + LA + ++ + + TP T+ + Sbjct: 181 GEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDYVHVV 227 >gi|42744598|gb|AAH66615.1| Tgds protein [Danio rerio] Length = 347 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 108/328 (32%), Gaps = 60/328 (18%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDI---------------------DLLK 38 LV G G I L II V D+ Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIY 97 P F + DV+ + AA T V+ + P +N +G + +A+ ++ IY Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 ISTD V+ P DE SP P N Y +SK A E V SY + VI R++ VY Sbjct: 129 ISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSNVYGP 188 Query: 154 --FGSNFLLSMLRLAKERR--EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + L L ++++ I Q + A + + I Sbjct: 189 RQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILGE------ 242 Query: 210 IFHMTADGGPVSWADFAEY--------IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 I+++ G + A + ES + + + + +Y P S Sbjct: 243 IYNI-GTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRY------PMNS 295 Query: 262 CLDCSKLANTHNIRIS-TWKEGVRNILV 288 KL R W EG+R + Sbjct: 296 V----KLHR-LGWRPKVAWTEGIRRTVQ 318 >gi|52082327|ref|YP_081118.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787718|ref|YP_093547.1| hypothetical protein BLi04041 [Bacillus licheniformis ATCC 14580] gi|319648201|ref|ZP_08002418.1| GalE protein [Bacillus sp. BT1B_CT2] gi|52005538|gb|AAU25480.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52350220|gb|AAU42854.1| GalE [Bacillus licheniformis ATCC 14580] gi|317389836|gb|EFV70646.1| GalE protein [Bacillus sp. BT1B_CT2] Length = 329 Score = 133 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 110/319 (34%), Gaps = 58/319 (18%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI----------DLLKPKDFAS 44 M LV G G I +++ + ++ +++ + G + DL Sbjct: 1 MAILVCGGAGYIGSHAVAELLSRNEDVVIIDNLQTGHEEAALKGASFYNGDLRDEAFLRK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + +++ AA + V ++ +P + N GA + K + ++ ST Sbjct: 61 VFQENDIEAVMHFAADSLVGESVTDPLKYYDNNVYGAVCLLKVMKEFDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PT+P N YG++KLA E+ + +Y +V+LR V + Sbjct: 121 YGEPDRVPIMETDPTDPTNPYGETKLAIEKMLKWSEKAYGIRHVVLRYFNVAGAHVDGLI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + +R +I + D + TP + + A I L Sbjct: 181 GEDHQPETHLIPIILQVALGKRDKIMIFGDDYPTPDGTCIRDYIHVMDLVDAHILAVERL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 +++ ++++ G + + + + G I + +A PA Sbjct: 241 RNGGESA---VYNLGNGTGFS-----VKEVVETARKVTG-----CPIPAEVAERRAGDPA 287 Query: 260 YSCL--DCSKLANTHNIRI 276 L K + Sbjct: 288 --QLIASSEKAVKELGWQP 304 >gi|254483408|ref|ZP_05096637.1| RmlD substrate binding domain superfamily protein [marine gamma proteobacterium HTCC2148] gi|214036282|gb|EEB76960.1| RmlD substrate binding domain superfamily protein [marine gamma proteobacterium HTCC2148] Length = 287 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 53/290 (18%), Positives = 116/290 (40%), Gaps = 18/290 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ LVIG++ + ++L + + +++ + R + DV+++ Sbjct: 1 MRVLVIGSDSPLGRALVELLEDLSRHDLVCLTRSASRWKSERQAKKAVRRAQADVVVD-- 58 Query: 59 AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPT 118 V+ D + ++ + +AKA G ++IS+ VF G +E Sbjct: 59 --IRVEAVADGGQDVVDLDLKRCQWVAKACQRDGACYMFISSSRVFSGDLDRRYNEGDLP 116 Query: 119 NPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQ 178 + + G E+ V Y + Y+ILR V++ G+N + +L + + + Sbjct: 117 DNSSDTGLLLADAEQVVRKYCDRYLILRLGPVFASDGANLVTRVLGELVSGENLVLDNNL 176 Query: 179 FGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGG 238 G P ++ AR I + ++ L G +H + + +FAE + +++ Sbjct: 177 RGCPVASGDGARVISALLDQ--QSVGAELWGTYHYCSTE-TATHYEFAEAVLAAASQFSD 233 Query: 239 PYS---KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 + ++ + P+ L+CSK+ NT I+ W+ + + Sbjct: 234 VSTGAVELMPLDPDA-PS-----LNRSLECSKIRNTFAIKQQPWRNAIAD 277 >gi|302540523|ref|ZP_07292865.1| putative polysaccharide biosynthesis protein [Streptomyces hygroscopicus ATCC 53653] gi|302458141|gb|EFL21234.1| putative polysaccharide biosynthesis protein [Streptomyces himastatinicus ATCC 53653] Length = 275 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 100/297 (33%), Gaps = 36/297 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCV------------QDVEIIRVGRPDIDLLKPKDFASFFLS 48 M L+IG +G + L + V +DL P+ + Sbjct: 1 MTVLIIGGSGFLGAELVRQAAAAGHTTAATFATRPGSTPGVAWHALDLRDPERIEAVVAE 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 P +++N +++ AEG +A AA G +++S+D VF G + Sbjct: 61 VGPLLVVNA----------TSSASDWAVTAEGPVHLAMAAAKSGCRLVHVSSDAVFSG-A 109 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K A E V V+ RT+ + S + + LA Sbjct: 110 RVHYDESCLPDPVTPYGAAKAAAETGVRLVHPEAVVARTSLIIGDRRSVHVRLVHDLAAG 169 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R ++ D P +A A++++A H A VS + Sbjct: 170 TRSGALFTDDIRCPVHVADLAAALLELAACDASG--------MHHLAGADAVSRHELGTL 221 Query: 229 IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRN 285 I + G S++ + LD T + + ++ + Sbjct: 222 I---ARRDGLDASRLPAGLRAESALPGA--LDIRLDSGATQRTLHTTLRGARQFLAR 273 >gi|269797719|ref|YP_003311619.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] gi|269094348|gb|ACZ24339.1| NAD-dependent epimerase/dehydratase [Veillonella parvula DSM 2008] Length = 307 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 107/321 (33%), Gaps = 56/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RP---------DIDLLKPKDFAS 44 M V G G I L ++ +++ + R ++D+ PK S Sbjct: 1 MNICVTGGAGFIGSHLVDRLIELGHDVLVIDDLSTGMRSFVHEDARFIEMDVRDPK-LLS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P ++ + AA T V + + P +N G + A + + S+ V Sbjct: 60 VFEEFKPAIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACRKVKVEQFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L+ P+ E P + YG +KL E + Y N V R A VY + Sbjct: 120 YGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + ++V D Q + A I+ N GI++ Sbjct: 180 EGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAMEN------GQCTGIYN 233 Query: 213 MTADGGP-----VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++ + G ++ I ++ I +S L K Sbjct: 234 VSTNKGTSVNELITRF---RAISGTDFMVYYENERIGDI------------KHSRLSNVK 278 Query: 268 LANTHN-IRISTWKEGVRNIL 287 I +T + G++ L Sbjct: 279 AERDFGFIATTTLEAGLQKTL 299 >gi|148380737|ref|YP_001255278.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|153933242|ref|YP_001385021.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 19397] gi|153935807|ref|YP_001388491.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. Hall] gi|148290221|emb|CAL84340.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 3502] gi|152929286|gb|ABS34786.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. ATCC 19397] gi|152931721|gb|ABS37220.1| UDP-glucose 4-epimerase [Clostridium botulinum A str. Hall] Length = 326 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 59/332 (17%), Positives = 115/332 (34%), Gaps = 65/332 (19%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPDI---------DLLKPKDFASF 45 M LV G G I +++++ ++ E++ G DL + Sbjct: 1 MAILVCGGAGYIGSHAVAALIEKNEEVVIVDNLVTGHEQAICGGKFYKGDLRDKEFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F D +I+ AA++ V ++ +EP ++ N G ++ + ++ ST + Sbjct: 61 FNQNKIDAVIHFAAFSLVGESMEEPFKYYNNNVCGTLSLLETMKEYNVQKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFLL 160 PI E T P N YG++KLA E+ + +Y YV+LR V S + Sbjct: 121 GEPENIPILEEDLTEPTNAYGETKLAVEKMLKWAEMAYNIKYVVLRYFNVAGAHESGNIG 180 Query: 161 SMLRL------------AKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 ++ R +I + D + T + + A I L Sbjct: 181 EAHKVESHLIPIILQVALGRREKIMIYGDDYNTKDGSCVRDYIHVMDLVEAHILALEKLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 ++ ++ +++ G + + + G + I ++ A R Sbjct: 241 RDNTSA---TYNLGNGEGFS-----VKEVIDICRKVTG-----HAIPSE---IAARRSGD 284 Query: 258 PAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ K + +I+ Sbjct: 285 PA--ILIASSEKIIKELGWNPK--KASLESII 312 >gi|325571101|ref|ZP_08146673.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] gi|325156186|gb|EGC68372.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus ATCC 12755] Length = 343 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 M LV+G G I ++ ++ + G D+ S Sbjct: 12 MAILVLGGAGYIGSHAVDQLIEQGKQVVVIDNLLTGHRQAIHPAATFYEGDIRDKAFLQS 71 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + D +I+ AA + V ++ ++P F+ N G + + + ++ ST Sbjct: 72 VFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKEHQVKHIVFSSTAAT 131 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 132 YGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKYVALRYFNVAGAKSDASI 191 Query: 160 LSML------------RLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIE---N 202 +R+E+++ + + TP T IA +L+ Sbjct: 192 GEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTPDGTCVRDYVHVEDLIAAHLLALEYL 251 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + +F++ ++ G E E +K I + P +A P S Sbjct: 252 QKGNESNVFNLGSNHGYS---------VKEMVEAARNVTK-KEIPARVAPRRAGDP--ST 299 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 300 LVASSEKARKVLGWKP 315 >gi|39997345|ref|NP_953296.1| carbohydrate oxidoreductase [Geobacter sulfurreducens PCA] gi|39984236|gb|AAR35623.1| carbohydrate oxidoreductase, putative [Geobacter sulfurreducens PCA] gi|307634989|gb|ADI85004.2| carbohydrate oxidoreductase, putative [Geobacter sulfurreducens KN400] Length = 304 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 116/305 (38%), Gaps = 45/305 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRP------------------DIDLLKPKD 41 L++G +G + +L ++ ++ R ID Sbjct: 6 NVLIVGASGMLGHTLFGRLFENDKLDTHATVRSVSELSRWFTDDHLLKIHGGIDADNFDS 65 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 + PDV+IN A ++P + + NA +A A + G ++ISTD Sbjct: 66 VLAVLAQIKPDVVINCVGVIKQLPAAEDPVVCIATNALFPHRLAVACKAAGARLVHISTD 125 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G + E ++ ++YG+SK GE +++ V LRT+ + + L Sbjct: 126 CVFSG-EKGDYRETDRSDATDLYGRSKFLGE----VTSDHCVTLRTSIIGHELKGGYGLV 180 Query: 162 MLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 L+++ + + T ++IAR I + D +L+G++ + ++ P+S Sbjct: 181 EWFLSRKG-PVKGFTNAIYTGFPTIEIARIIEKYII-----CDMNLKGLYQVASE--PIS 232 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 + E I +A+ G K+ I + Y L+ K N W E Sbjct: 233 KYELLELI---AAQYGK---KIEIIPFGDFH------CYRSLNSDKFRNATGYSAPAWPE 280 Query: 282 GVRNI 286 + + Sbjct: 281 LIAEM 285 >gi|298247134|ref|ZP_06970939.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297549793|gb|EFH83659.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 327 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 84/238 (35%), Gaps = 30/238 (12%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI--------DLLKPKDFASF 45 MK LV G G I + + + +++ + R I + Sbjct: 1 MKVLVTGGTGYIGSHTVRELTARGYDVVVIDTLERSSRQTIGSLPFYQGSITDDAFLERV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY-VF 104 F P +I+ AAY A ++ EPE F N G+ ++ + + I S+ VF Sbjct: 61 FAQEKPGAVIHFAAYKAPGESMLEPEKYFRTNVGGSISLLETMARHQVRFIVFSSSCSVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 ++ P+ E +P +P ++YG++KL GE + + I A Y N + Sbjct: 121 GTPTQLPVTENAPFSPESVYGETKLMGETLLRWFEKTRGIRYAALRYFNASGASLDNVIG 180 Query: 161 SMLRLAKERREI--------SVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLR 208 + + + FGT PT+ R I + I + Sbjct: 181 EDWDRTQNLIPLVMKAALGVTPSIKVFGTDYPTADGTAVRDYIHVVDLAIAHVKALEY 238 >gi|134082868|emb|CAK42698.1| unnamed protein product [Aspergillus niger] Length = 362 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 102/329 (31%), Gaps = 60/329 (18%) Query: 1 MK----CLVIGNNGQIA----QSLSSMCVQDVEIIRVGRPDI------------------ 34 MK LV G G I + L + ++ D Sbjct: 19 MKNVKTILVTGGAGFIGGWFVRHLLQVYGTKYTVLCFDILDYCASKRNFQPVEHLPNFHF 78 Query: 35 ---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI 91 DL + F F D +++ AA + VD++ P N G + +AA Sbjct: 79 FPGDLCDRDRVTALFQQFKVDAVVHFAANSHVDQSLVNPLSFTRSNVTGTHVLLEAARQA 138 Query: 92 GI--PCIYISTDYVFDGL---SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 G I+ISTD V+ G E NP N Y SK A E SY ++ Sbjct: 139 GTVIRFIHISTDEVYGGNMPGQDYAFTEEDQLNPTNPYSASKAAAEMIANSYRYSFHMPI 198 Query: 143 VILRTAWVYSIFGSNFLLSMLRLAK----ERREISVVCDQFGTPTSALQIARAIIQIAHN 198 +I R V+ L + +R + + A I H Sbjct: 199 IITRCNNVFGPCQYPEKLIPKFAMQMLRSQRMTLHGQGEAVRGFVYVSDAMSAFDIILHR 258 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHR 257 + + +++++ + D A+ I +QY T A R Sbjct: 259 GLVSE------TYNISSKE-QIKVVDVAKRIIQWFHAVQSDTC-------EQYLETVADR 304 Query: 258 PAYSCL---DCSKLANTHNIRISTWKEGV 283 P + + SKL ++ EG+ Sbjct: 305 PFNDRMYWTNDSKLRQLGWTEKVSFDEGL 333 >gi|294791627|ref|ZP_06756775.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] gi|294456857|gb|EFG25219.1| UDP-glucose 4-epimerase [Veillonella sp. 6_1_27] Length = 307 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 107/321 (33%), Gaps = 56/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RP---------DIDLLKPKDFAS 44 M V G G I L ++ +++ + R ++D+ PK S Sbjct: 1 MNICVTGGAGFIGSHLVDRLIELGHDVLVIDDLSTGMRSFVHEDARFIEMDVRDPK-LLS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P ++ + AA T V + + P +N G + A + + S+ V Sbjct: 60 VFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACRKVKVEQFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L+ P+ E P + YG +KL E + Y N V R A VY + Sbjct: 120 YGDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + ++V D Q + A I+ N GI++ Sbjct: 180 EGGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAMEN------GQCTGIYN 233 Query: 213 MTADGGP-----VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++ + G ++ I ++ I +S L K Sbjct: 234 VSTNMGTSVNELITRF---RAISGTDFMVYYENERIGDI------------KHSRLSNVK 278 Query: 268 LANTHN-IRISTWKEGVRNIL 287 I +T + G++ L Sbjct: 279 AERDFGFIATTTLEAGLQKTL 299 >gi|257867696|ref|ZP_05647349.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257874023|ref|ZP_05653676.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257876602|ref|ZP_05656255.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] gi|257801779|gb|EEV30682.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC30] gi|257808187|gb|EEV37009.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC10] gi|257810768|gb|EEV39588.1| UDP-glucose 4-epimerase [Enterococcus casseliflavus EC20] Length = 332 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 113/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RP-----DIDLLKPKDFAS 44 M LV+G G I ++ + Q +++ V P + D+ S Sbjct: 1 MAILVLGGAGYIGSHAVDQLIEQGKQVVVVDNLLTGHRQAIHPAATFYEGDIRDKAFLQS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + D +I+ AA + V ++ ++P F+ N G + + + ++ ST Sbjct: 61 VFEKETIDGVIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKEHQVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPDHSPITEETPTNPKNPYGESKLIMEKMMRWCDEAYGMKYVALRYFNVAGAKSDASI 180 Query: 160 LSML------------RLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIE---N 202 +R+E+++ + + TP T IA +L+ Sbjct: 181 GEDHDPETHLVPIILQAALGQRKEVAIFGEDYDTPDGTCVRDYVHVEDLIAAHLLALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + +F++ ++ G E E +K I + P +A P S Sbjct: 241 QKGNESNVFNLGSNHGYS---------VKEMVEAARNVTK-KEIPARVAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKARKVLGWKP 304 >gi|317485065|ref|ZP_07943947.1| UDP-glucose 4-epimerase [Bilophila wadsworthia 3_1_6] gi|316923600|gb|EFV44804.1| UDP-glucose 4-epimerase [Bilophila wadsworthia 3_1_6] Length = 334 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 89/269 (33%), Gaps = 45/269 (16%) Query: 2 KCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI----------DLLK 38 K LV G G + L + Q E + V +I D Sbjct: 3 KILVTGGTGYLGTHMLVELVKQGYEPLCVDNLHNSNPSVLLAVKEICGKEIPFIKADAGD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI 98 + F + D +I+ A + AV ++ P + + N + A I + G ++ Sbjct: 63 IAAMRALFAEYQIDAVIHFAGHKAVGESVAHPLMYYRNNYDSALTILEMCLKHGSALVFS 122 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV-----ILRTAWVYSI 153 S+ V+ P+ E P + +N YG++KL EE + + ILR Sbjct: 123 SSATVYGVPHFLPLTEDHPLSAVNPYGRTKLYIEETIRDVALAHPEFNVSILRYFNPVGA 182 Query: 154 FGSNFLLS-------------MLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 S + A R+E+ V D + TP T I+ + Sbjct: 183 HESGLIGENPNGIPNNLMPFVCQTAAGIRKELQVFGDDYDTPDGTGVRDYIHVTDLISGH 242 Query: 199 L--IENSDTSLRGIFHMTADGGPVSWADF 225 + ++ +T I H G S + Sbjct: 243 IAALKKLETKPGCIIHNLGTGNGTSVLEM 271 >gi|257884317|ref|ZP_05663970.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|293567428|ref|ZP_06678775.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|294620737|ref|ZP_06699944.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] gi|257820155|gb|EEV47303.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,501] gi|291589825|gb|EFF21626.1| UDP-glucose 4-epimerase [Enterococcus faecium E1071] gi|291599717|gb|EFF30727.1| UDP-glucose 4-epimerase [Enterococcus faecium U0317] Length = 329 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 106/316 (33%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +P NP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ + G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSSKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREVLGWKP 304 >gi|326201707|ref|ZP_08191578.1| UDP-glucose 4-epimerase [Clostridium papyrosolvens DSM 2782] gi|325988307|gb|EGD49132.1| UDP-glucose 4-epimerase [Clostridium papyrosolvens DSM 2782] Length = 328 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 105/319 (32%), Gaps = 59/319 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD--------------IDLLKPKDFASF 45 M LV G G I ++ + E++ + + DL + Sbjct: 1 MAVLVTGGAGYIGSHTVAELLDAKEEVVVLDNLEKGHREAVLGGKFIQADLRNIDEIRKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AAY V ++ P ++ N + + A G ++ ST + Sbjct: 61 FRENDIEAVIHFAAYIEVGESVTNPLKYYNNNVIASLNLLTAMQEAGVNKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIF------ 154 PI E T P+N YG++KL E+ + + Y I Y Sbjct: 121 GIPEEIPIKERDKTAPINPYGETKLTVEKILKWADDAYGIKYAVLRYFNACGAHISGKIG 180 Query: 155 -----GSNFLLSMLRLAK-ERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 S+ + +L++A+ +R EI + + + T +A+A + NL Sbjct: 181 EAHSPESHLIPIILQVAQGKREEIKLFGNDYNTKDGTCVRDYIHVSDLAQAHVLALKNLR 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 + ++++ F++ G + + + G I P RP Sbjct: 241 KGAESN---TFNLGNGTGFSN-----REVVEVARAVTGKN-----IKAADAP---RRPGD 284 Query: 261 S---CLDCSKLANTHNIRI 276 K N + Sbjct: 285 PDILVASAEKAMNILGWKP 303 >gi|78043771|ref|YP_359826.1| dTDP-glucose 4,6-dehydratase [Carboxydothermus hydrogenoformans Z-2901] gi|77995886|gb|ABB14785.1| dTDP-glucose 4,6-dehydratase [Carboxydothermus hydrogenoformans Z-2901] Length = 309 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 44/304 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR----------PDI---------DLLKPKD 41 MK LV G G I + D E+I V + ++ D+ Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYDHELIIVDKLTYAGDLRRIEEVRDRIKFYKADVADKTA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIST 100 F P+ +++ AA + VD++ +P N +G + A+ G ++IST Sbjct: 61 IEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFVHIST 120 Query: 101 DYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI-- 153 D V+ E SP P + Y SK A + +Y Y ++ R Y Sbjct: 121 DEVYGELGKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPCNNYGPWQ 180 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI--ARAIIQIAHNLIENSDTSLRGIF 211 + + +++ A I V +G + + I+ + L++ + Sbjct: 181 YPEKLIPVVIKKALNNEPIPV----YGQGLNVREWLYVDDCIEAVYLLLQKGKPGEA--Y 234 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 ++ G + + I + + V + YS L+ K+ Sbjct: 235 NI-GSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDF-------RYS-LNSKKIKMN 285 Query: 272 HNIR 275 + + Sbjct: 286 YAWK 289 >gi|303229691|ref|ZP_07316479.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515816|gb|EFL57770.1| RmlD substrate binding domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 305 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 99/307 (32%), Gaps = 53/307 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------------GRPDIDLLKPKDFAS 44 M+ V G G I L + + V ++D+ S Sbjct: 1 MRVCVTGGAGFIGSHLVDRLIALGHTVLVIDNLTTGVREFVNPKATFIEMDVRDAN-IES 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P V+ + AA T V + + P++ +N G + +AA + S+ V Sbjct: 60 IFADFKPQVVFHEAAQTMVPASMENPKMDCDVNLMGLINMLEAARKHNVSHFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN-- 157 + L P+ E P + YG +KL E + Y + V R A VY + Sbjct: 120 YGDLDTLPLTEDMSGKPTSFYGLTKLTAEGYLRIYEQAFGLKTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + +++ D Q + A N+ + L GI++ Sbjct: 180 EGGVISIFNRLINEDKPLTIFGDGEQTRDFVYVADVVEA------NIKAMNHPDLTGIYN 233 Query: 213 MTADGGPVSWAD----FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 ++ + S + FA I + +V I +S L K Sbjct: 234 ISTNTS-TSVNELVGYFAS-ISGKEIVTNYEAERVGDI------------RHSRLCNKKA 279 Query: 269 ANTHNIR 275 Sbjct: 280 KKDFGFE 286 >gi|255523231|ref|ZP_05390202.1| UDP-glucose 4-epimerase [Clostridium carboxidivorans P7] gi|296186194|ref|ZP_06854599.1| UDP-glucose 4-epimerase [Clostridium carboxidivorans P7] gi|255513099|gb|EET89368.1| UDP-glucose 4-epimerase [Clostridium carboxidivorans P7] gi|296049462|gb|EFG88891.1| UDP-glucose 4-epimerase [Clostridium carboxidivorans P7] Length = 328 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 98/295 (33%), Gaps = 47/295 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRPD---------IDLLKPKDFASF 45 M LV G G I + + +++ + ++ G D DL + Sbjct: 1 MNILVCGGAGYIGSHMVAYLLENGHDVVILDNLQTGHKDSLLGGKLYIGDLKDNEILDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F D +I+ AA + V ++ + P F N + +A + I I + ST + Sbjct: 61 FTENKIDAVIDFAANSLVGESVENPLKYFDNNIGSTINLLEAMNRHNIKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E T P N YG+SKLA E+ + Y I TA Y + + Sbjct: 121 GEPENIPILEQDKTFPTNPYGESKLAVEKILKWCDKAYGIKYTALRYFNACGAHINGNIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 +R +I + D + T T + +L+ Sbjct: 181 EDHEPESHLIPIILQAALGKREKIMIFGDDYNTEDGTCVRDYVHVSDLASAHLLALKRLK 240 Query: 207 LRG---IFHMTADGG--PVSWADFAEYI------FWESAERGGPYSKVYRIFTKQ 250 G I+++ G D A + +A R G + + I + + Sbjct: 241 NGGESKIYNLGNGKGFSVKEVVDVARKVTGINIKAEIAARRAGDPATL--IASSE 293 >gi|315425554|dbj|BAJ47215.1| UDP-glucose 4-epimerase [Candidatus Caldiarchaeum subterraneum] Length = 318 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 28/303 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD-----IDLLKPKDFASFFLSFSPDVI 54 MK L+ G+ G + + L + ++ +D+ F + + Sbjct: 14 MKVLITGSEGFVGRHLREYLGGRGFVVVGADISSGADIRMDVTDFDSVLKTFEQNRFEAV 73 Query: 55 INPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFDGLSRTPID 113 ++ AA + + +P F +N G+ + +AA + S+ + + P+ Sbjct: 74 VHLAAVADIPLSMRDPHRCFKVNVYGSLNVLEAARRMGVRRVVVFSSANYYGAPVKLPVT 133 Query: 114 EFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV----YSIFGSNFLLSMLR----L 165 E +P NP Y SK+A E SY N+ + T + + + L Sbjct: 134 EDTPPNPRTPYDYSKVALENVAWSYHRNHGVPLTVLRPWKAFGEYEPGEKMVPRFVKACL 193 Query: 166 AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADF 225 A E + P + A+ + G G +S + Sbjct: 194 ASEPIPLFNGGADVTDPYHVDNLCHAVELGLIKDEAVGEAFNVGT------GNALSVREL 247 Query: 226 AEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIS-TWKEGVR 284 AE I + S R + P K S K+A + ++G++ Sbjct: 248 AEKIKQLTNSSSKLESLPPRTPAEATPMK------SIPSIKKIATKLGYTPQVSLEQGLK 301 Query: 285 NIL 287 ++ Sbjct: 302 RVI 304 >gi|83950201|ref|ZP_00958934.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM] gi|83838100|gb|EAP77396.1| dTDP-glucose 4,6-dehydratase [Roseovarius nubinhibens ISM] Length = 349 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 66/329 (20%), Positives = 113/329 (34%), Gaps = 52/329 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 M+ LV G G I ++ Q E+I + +D+ Sbjct: 1 MRILVTGGAGFIGSAVVRRAVAQGHEVINLDALTYAACLDNVAEVAQSPNYRFEHVDIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 F P+ +++ AA + VD++ D P N G + +AA Sbjct: 61 RAALERVFRDHKPEAVMHLAAESHVDRSIDGPAEFVETNVTGTCNMLEAARGHWERQGRP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 G +ISTD VF L E +P +P + Y SK A + V ++ Y V+ Sbjct: 121 EGFRFHHISTDEVFGSLGDEGLFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPIVMT 180 Query: 146 RTAWVYSIFG--SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENS 203 + Y + + ++ A E REI V +G + + A L++ Sbjct: 181 NCSNNYGPYHFPEKLVPVVIINALEGREIPV----YGAGANVRDWLY-VEDHAEALLQVV 235 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----A 259 G + G D +I +R + + +Q A RP Sbjct: 236 QKGAVGRSYNIGGEGERRNIDLVRHICAVLDDRRPKDTS----YAEQITFVADRPGHDHR 291 Query: 260 YSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D ++ + R S T +EG+ + Sbjct: 292 YAI-DARRIRDELGWRPSVTVEEGIARTV 319 >gi|69246798|ref|ZP_00604127.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257878551|ref|ZP_05658204.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257883186|ref|ZP_05662839.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257889251|ref|ZP_05668904.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257894691|ref|ZP_05674344.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|258615922|ref|ZP_05713692.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|260560137|ref|ZP_05832315.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|261208165|ref|ZP_05922839.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289566214|ref|ZP_06446647.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|293559382|ref|ZP_06675923.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] gi|294614216|ref|ZP_06694135.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|294618872|ref|ZP_06698384.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|68195089|gb|EAN09550.1| UDP-glucose 4-epimerase [Enterococcus faecium DO] gi|257812779|gb|EEV41537.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,230,933] gi|257818844|gb|EEV46172.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,502] gi|257825611|gb|EEV52237.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,410] gi|257831070|gb|EEV57677.1| UDP-glucose 4-epimerase [Enterococcus faecium 1,231,408] gi|260073972|gb|EEW62296.1| UDP-glucose 4-epimerase [Enterococcus faecium C68] gi|260077599|gb|EEW65316.1| UDP-glucose 4-epimerase [Enterococcus faecium TC 6] gi|289161992|gb|EFD09859.1| UDP-glucose 4-epimerase [Enterococcus faecium D344SRF] gi|291592875|gb|EFF24465.1| UDP-glucose 4-epimerase [Enterococcus faecium E1636] gi|291594872|gb|EFF26237.1| UDP-glucose 4-epimerase [Enterococcus faecium E1679] gi|291606667|gb|EFF36060.1| UDP-glucose 4-epimerase [Enterococcus faecium E1162] Length = 329 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 106/316 (33%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ + S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +P NP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ + G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSSKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREILGWKP 304 >gi|303327683|ref|ZP_07358123.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] gi|302862044|gb|EFL84978.1| UDP-glucose 4-epimerase [Desulfovibrio sp. 3_1_syn3] Length = 269 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 88/244 (36%), Gaps = 36/244 (14%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ + E + + + D+ P+ Sbjct: 1 MAILVCGGAGYIGSHNVRALLARGEEAVVIDNFLTGHRRAVPAGVRLHEGDIRDPEALDR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AA + V ++ ++P F+ N G + +A G ++ ST V Sbjct: 61 VFSENRIDAVLHFAASSLVGESMEKPLAYFNNNVHGMQMLLEAMRRHGVDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + R PI+E PT P N YG+SKL E + ++ V+LR V + Sbjct: 121 YGEPRRVPIEESDPTRPANPYGESKLMMENIMRWVGLAHGMRSVVLRYFNVAGALPGGAI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 R R I+V + + TP T + +A + D Sbjct: 181 GEDHRPESHLIPLILQVPLGLREHITVFGEDYPTPDGTCIRDYLDVM-DLADAHMRALDY 239 Query: 206 SLRG 209 RG Sbjct: 240 LRRG 243 >gi|157415663|ref|YP_001482919.1| hypothetical protein C8J_1344 [Campylobacter jejuni subsp. jejuni 81116] gi|157386627|gb|ABV52942.1| hypothetical protein C8J_1344 [Campylobacter jejuni subsp. jejuni 81116] Length = 324 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 105/315 (33%), Gaps = 53/315 (16%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + + I + R DLL Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNNYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLT 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 NVFKQEKIDAVVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASKDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHRPAYSC 262 G ++ G S + I + G + Y P +A PA Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEVVSGKKCPIN------YAPRRAGDPA--R 287 Query: 263 L--DCSKLANTHNIR 275 L D K + Sbjct: 288 LYADNKKAKEILSWE 302 >gi|289548767|ref|YP_003473755.1| UDP-glucose 4-epimerase [Thermocrinis albus DSM 14484] gi|289182384|gb|ADC89628.1| UDP-glucose 4-epimerase [Thermocrinis albus DSM 14484] Length = 327 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 96/250 (38%), Gaps = 40/250 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD---------IDLLKPKDFASF 45 MK LV G G I + + + V+ + G+ + +DLL Sbjct: 1 MKVLVTGGAGYIGSHMVKLLGEKGYQVLVVDNLSTGKREAVLYGRLVVLDLLLYAPLEEL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 L F PD++++ AA V ++ +P + N + + +A G+ I+ S+ V+ Sbjct: 61 MLDFRPDIVMHFAAKILVHESVRKPLEYYENNLQATWNLLRAMKRAGVKYMIFSSSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSI------- 153 S P+ E PT P+N YG SKL GE V + + ILR V Sbjct: 121 GTPSSLPVKESDPTVPINPYGWSKLMGERMVEDFARAEGLKFGILRYFNVAGADPELKLG 180 Query: 154 ----FGSNFLLSMLRLAKERRE-ISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 ++ + +++AK + V + TP + A +++ L+ Sbjct: 181 PVKQNPTHLIARAVKVAKGDIPYLEVYGTDYPTPDGTCVRDYIHVTDLCNAHLRVLEYLL 240 Query: 201 ENSDTSLRGI 210 E + + + Sbjct: 241 EGGQSDVFNV 250 >gi|297205241|ref|ZP_06922637.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] gi|297149819|gb|EFH30116.1| UDP-glucose 4-epimerase [Lactobacillus jensenii JV-V16] Length = 336 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 87/227 (38%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M+ LV G G I + ++D +++ + R + D+L + Sbjct: 8 MRVLVTGGAGYIGSHTVNALLEDGNDVVVLDNLYTGHRQAVNKKAKFYHGDVLDTNLVTN 67 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 ++ D +I+ AAY V ++ EP + N G ++ KA + G+ ++ S+ Sbjct: 68 ILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVKNLVFSSSAAT 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E +PTNP+N YG++KL E+ + I A Y Sbjct: 128 YGVPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDQADGIKSIALRYFNVAGASLDASI 187 Query: 152 --SIFGSNFLLSMLRLAKERRE--ISVVCDQFGTP--TSALQIARAI 192 L+ + LA + ++ + + TP T+ + Sbjct: 188 GEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDYVHVV 234 >gi|325107112|ref|YP_004268180.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] gi|324967380|gb|ADY58158.1| UDP-glucose 4-epimerase [Planctomyces brasiliensis DSM 5305] Length = 322 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 83/239 (34%), Gaps = 29/239 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRPD----------IDLLKPKDFAS 44 MK LV G G I + + + GR + +D+ + Sbjct: 1 MKVLVTGGAGFIGSHIVDALQAAGHTAVVLDNLSTGRKENLPDEVTLHEVDICQRDAVRK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 PD + + AA +V ++ EP +N G + +AA G ++ S+ V Sbjct: 61 VLEQERPDAVCHQAAQMSVGRSVQEPSFDAEVNILGFLNVLEAAAETGVKRIVFASSGGV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNF- 158 G P E P NP++ YG SK AGE + +T + V LR + VY + Sbjct: 121 LYGDVTEPQPETYPANPISPYGISKWAGERYLRFFTAEHGLETVALRYSNVYGPRQNPHG 180 Query: 159 ------LLSMLRLAKERREISVVCDQFGTPTSALQIARA-IIQIAHNLIENSDTSLRGI 210 + LA E I+ +ARA + + L E G Sbjct: 181 EAGVVAIFCQRMLAGEATRINGDGKYIRDYVYVTDVARANFLALTQTLPEQHIAFNVGT 239 >gi|85858248|ref|YP_460450.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] gi|85721339|gb|ABC76282.1| UDP-glucose 4-epimerase [Syntrophus aciditrophicus SB] Length = 331 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 64/327 (19%), Positives = 107/327 (32%), Gaps = 70/327 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--------------IIRVGRPDI-DLLKPKDFASF 45 M+ LV G G I + + + GR ++ +L + Sbjct: 1 MRILVTGGAGYIGSHVVKALGEQGHDLLIYDNLSTGHDWAVLYGRLEVGELADTRRLDEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 +F P+ +++ AA V+++ EP + N + + A + + IY ST V+ Sbjct: 61 LQAFRPEAVLHFAASIQVEESVREPLRYYRNNVANSLNLLDAMERHDVRNLIYSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSIFGSNFL 159 R P+DE P NP+N YG SK+ E + + Y+ LR V N + Sbjct: 121 GIPERMPVDESLPLNPINPYGASKVMMETVLRDIADARENFRYIALRYFNVAGADAGNRI 180 Query: 160 LSMLRLA------------KERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 A + ++SV + TP +A A I+ + L Sbjct: 181 GQAYADATHLITRALKTANGQYPKLSVFGTDYPTPDGTCIRDYIHVDDLADAHIRALNYL 240 Query: 200 IENSDTS--LRGIFHMTADGGPVSWADFAEYI------FWESAERGGPYSKVYRIFTKQY 251 +E T G H + V D A+ + E+ R G ++ Sbjct: 241 VETGKTEIMNCGYGHGFSVREVV---DVAKKVTRIDFPVEETERRAGDPPELIA------ 291 Query: 252 PTKAHRPAYSCLDCSKLANTHNIRIST 278 D SKL Sbjct: 292 ------------DSSKLRRLTGWLPRH 306 >gi|323137045|ref|ZP_08072125.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] gi|322397806|gb|EFY00328.1| NAD-dependent epimerase/dehydratase [Methylocystis sp. ATCC 49242] Length = 288 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 112/311 (36%), Gaps = 53/311 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFASF 45 M+ LV+G G + L D E+I R +D+L A Sbjct: 1 MRVLVLGATGMLGHKLVETLSPDFEVIATRRRGAVEPTTAKGVRMVEGVDVLDRSAIAGL 60 Query: 46 FLSFSPDVIINPAAYT-----AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 + PD ++N AV+ +E +IN+ +A+ G I+ ST Sbjct: 61 IAAQRPDAVLNAVGVVKQITDAVNTSEI-----IAINSMLPNLLAEVCSVAGCRLIHFST 115 Query: 101 DYVFDGLSRT-----PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG 155 D VF G + E P + ++YG SKL GE + T + LRT+ + Sbjct: 116 DCVFTGARDSIRGADGYREQDPPDARDLYGLSKLLGESR----TPGCLTLRTSIIGPELR 171 Query: 156 SNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 + L LA+ + T + +A + I SL G++H+ Sbjct: 172 GRYGLLEWFLAQGDATVLGFSKALFTGLPTVILAEIVATILTKH-----ASLEGLYHVAV 226 Query: 216 DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIR 275 P+S + +F ++ +R + +K Y LD ++LAN Sbjct: 227 T--PISKYEL-LNLFGDAYDRSTSIIE----DSKLY-------CDRRLDGAQLANAIGWS 272 Query: 276 ISTWKEGVRNI 286 W E VR + Sbjct: 273 APAWPELVRRM 283 >gi|220924210|ref|YP_002499512.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] gi|219948817|gb|ACL59209.1| dTDP-glucose 4,6-dehydratase [Methylobacterium nodulans ORS 2060] Length = 349 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 109/338 (32%), Gaps = 67/338 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 M+ LV G G I +L VQ +++ + + D+ Sbjct: 1 MRILVTGGCGFIGSALVLHLVQERGHDVLTLDALTYAANPLSLQPLRDDPRHRFAEADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC-- 95 + + F F P +++ AA + VD++ P N G + +AA + Sbjct: 61 DSERVNALFEEFQPQAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHSTRLSD 120 Query: 96 --------IYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 ++ISTD V+ E S +P + Y SK A + ++ Y Sbjct: 121 GAKQAFRFLHISTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 ++ + Y F + M+ A E + + V D AR ++ + Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKPLPVYGDGQNERDWIHVEDHARGLVAVLEG 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFA-----EYIFWESAERGGPYSKVYRIFTKQYPT 253 + + GG ++ IF GP+ ++ T Sbjct: 241 GRIGE------TYLL---GGRAVRSNLEVVKTLCAIFDRLRPEAGPHERLITFVTD---- 287 Query: 254 KAHRPAYSC---LDCSKLANTHNIRI-STWKEGVRNIL 287 RP + +D K R ++++ + + + Sbjct: 288 ---RPGHDRRYAIDPGKAERELGWRPTRSFEQALEDTV 322 >gi|77862423|gb|ABB04490.1| QnlA [Escherichia coli] Length = 295 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 105/300 (35%), Gaps = 50/300 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRP-----------------DIDLLKPKDF 42 +++G G + SL + +++ +I R +ID Sbjct: 4 NVMILGVTGMLGYSLFTNLKDYKNLNVIGTARNLLGKEQYFKTQKQNLVLNIDATDIDSI 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + S PDV+IN + + A INA +A+ + I STD Sbjct: 64 DNVINSVDPDVVINCIGLIKQHEISKQHVEAIKINALLPHQLAEVCNKYNAKLIQFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VFDG E N ++YGKSK GE ++ LRT+ + S+ L Sbjct: 124 VFDGKKGL-YRESDTPNSTDLYGKSKCLGE----VNYGKHLTLRTSIIGHELNSSVSLID 178 Query: 163 LRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD-GGP 219 L++ E++ + PT I ++ I +D SL+GI+H++A+ Sbjct: 179 WFLSQST-EVNGYSKAIFSGLPTCY------IAKLLAEKIIAND-SLKGIYHLSANPIDK 230 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + I+ +S + + LD ++L +W Sbjct: 231 YTLISLVSEIYGKSIKINKSEKLII---------------DRSLDSTRLREAIGFIPPSW 275 >gi|67458930|ref|YP_246554.1| dTDP-4-dehydrorhamnose reductase [Rickettsia felis URRWXCal2] gi|67004463|gb|AAY61389.1| dTDP-4-dehydrorhamnose reductase [Rickettsia felis URRWXCal2] Length = 285 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 104/306 (33%), Gaps = 45/306 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-----------------PDIDLLKPKD 41 MK L++G G + S+ QD ++ R ++D+ Sbjct: 1 MKILILGVTGMLGNSMFRFLSQDSKFDVCATARNNFARSYFSKDLSDKLITNVDVENHDS 60 Query: 42 -FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 F P+++IN ++P A IN+ +A I+IST Sbjct: 61 LVEVFINKTKPEIVINCIGLVKQLADANDPLKALPINSLLPHRLANLCKLANSRLIHIST 120 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VF G E + ++YG+SK GE + + LRT+ + N L Sbjct: 121 DCVFSGKKGN-YKESDFPDCYDLYGRSKFLGEVDY----PHAITLRTSIIGHELAGNRSL 175 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L+ E ++ + +++AR I + L G++H+ + P+ Sbjct: 176 INWFLSAEG-QVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELHGLYHVASK--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + + + + K+ I + + +D ++ W Sbjct: 228 NKLELLKLV------AAIYDKKIDIIPSDELV------IDRSMDSTRFNEATGYNPPEWP 275 Query: 281 EGVRNI 286 E V+ + Sbjct: 276 ELVKRM 281 >gi|222081305|ref|YP_002540668.1| UDP-glucose 4-epimerase [Agrobacterium radiobacter K84] gi|221725984|gb|ACM29073.1| UDP-glucose 4-epimerase [Agrobacterium radiobacter K84] Length = 328 Score = 132 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 102/294 (34%), Gaps = 48/294 (16%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD---------IDLLKPKDFAS 44 M+ LV+G G I + + + + + G + D+L + Sbjct: 3 MRNILVVGGAGFIGSHTAKLLRKQGYEPIVYDNLSTGHEESVRWGPLEKGDILDTQRLVE 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 +SPD +I+ AA V ++ ++P ++ N G ++ +A G I+ S+ + Sbjct: 63 VLTKYSPDAVIHFAASAYVGESVEDPAKYYANNVNGTHSLLEACRRSGTDKLIFSSSCAI 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---SIFGSNFLL 160 + PI E P+N YG++KL E +A Y+ Y + A Y S L Sbjct: 123 YGIPDHLPIREHQIPQPINPYGRTKLIAEHMLADYSAAYGLHYAALRYFNASGADPEQEL 182 Query: 161 SMLR-----------LAKER--REISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 LA + V D + TP T + +A I + Sbjct: 183 GEWHDPETHLIPRALLAASGSIDFLQVYGDDYDTPDGTCIRDYIHVM-DLARAHILAVEY 241 Query: 206 SLRGIFHMTADGGP---VSWADFAEYIFWES---------AERGGPYSKVYRIF 247 +RG ++ + G S + I S A R G +Y Sbjct: 242 LMRGGANLAVNLGTGHGTSIKEILTAIRRISRCPVPVEMRARRAGDPPALYAAS 295 >gi|157803929|ref|YP_001492478.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia canadensis str. McKiel] gi|157785192|gb|ABV73693.1| putative dTDP-4-dehydrorhamnose reductase [Rickettsia canadensis str. McKiel] Length = 284 Score = 132 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 110/307 (35%), Gaps = 48/307 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRP-------DIDLLKP----------KD 41 MK L++G G + S+ + ++ R DL Sbjct: 1 MKILILGVTGMLGNSIFRFLSCDKQFDVYGTVRDNSARSYFSQDLSDKLITNVVVENHDS 60 Query: 42 FASFFLSFSPDVIINPAAYTA--VDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 F F PD++IN VD +P A IN+ +A D +G I+IS Sbjct: 61 FVKAFNKIKPDIVINCIGLVKQLVDV--GDPLKALPINSLLPHRLAGLCDLVGSRLIHIS 118 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFL 159 TD VF G E + ++YG+SKL GE N + LRT+ + N Sbjct: 119 TDCVFSGKKGN-YKESDFPDCYDLYGRSKLLGEVDY----PNAITLRTSIIGHELAGNRS 173 Query: 160 LSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP 219 L+ L+ E + + +++AR I + LRG++H+ + P Sbjct: 174 LTNWFLSAEG-SVKGFEKAIYSGFPTVELARIIRDFVL-----PNKELRGLYHVASK--P 225 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 ++ + + + ++ I + + LD ++ W Sbjct: 226 INKLGLLKLVAEIYNK------EIDIIPSDELV------IDRSLDATRFNEVTGYTPPNW 273 Query: 280 KEGVRNI 286 +E V+N+ Sbjct: 274 RELVKNM 280 >gi|300909179|ref|ZP_07126640.1| UDP-glucose 4-epimerase [Lactobacillus reuteri SD2112] gi|300893044|gb|EFK86403.1| UDP-glucose 4-epimerase [Lactobacillus reuteri SD2112] Length = 338 Score = 132 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 61/314 (19%), Positives = 98/314 (31%), Gaps = 48/314 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRPDI----------DLLKPKDFAS 44 M LV G G I + +++ E ++ G D D+ + Sbjct: 8 MSILVAGGAGYIGSHMVKDLIENGEDVVVADNLSTGHRDAINPKAKFYEGDIRDRQFLDK 67 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ +P F N G + +A I I + ST Sbjct: 68 IFDNEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAAT 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG SKL EE +A Y I A Y Sbjct: 128 YGVPEHMPIKETDPQNPINPYGLSKLMMEEMMAWADKAYGIKFVALRYFNVAGAAPDGTI 187 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + +R E+S+ D + TP T+ + +++ Sbjct: 188 GEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTPDGTNVRDYVHVMDLADAHILAIKYL 247 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--AYS-C 262 + G F+ E+A I K P RP S Sbjct: 248 KEGNKSNAFNLGSST---GFSNKQMLEAAREVTG----KPIPAKMAP---RRPGDPDSLV 297 Query: 263 LDCSKLANTHNIRI 276 K N Sbjct: 298 AASDKARNVLGWSP 311 >gi|170743902|ref|YP_001772557.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] gi|168198176|gb|ACA20123.1| dTDP-glucose 4,6-dehydratase [Methylobacterium sp. 4-46] Length = 350 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 113/333 (33%), Gaps = 57/333 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVG--------------RPD-------IDLL 37 M+ LV G G I +L V+D E++ + R + D+ Sbjct: 1 MRILVTGGCGFIGSALVLHLVRDLGHEVLTLDALTYAANPISLLPLRDEPRHRLVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 +P+ A+ F F P+ +++ AA + VD++ P N G + +AA + Sbjct: 61 EPERVAALFAEFRPEAVMHLAAESHVDRSITGPAAFIRTNVVGTQVMLEAARAHHAGLPA 120 Query: 93 -----IPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +++STD V+ E S +P + Y SK A + ++ Y Sbjct: 121 DGQARFRFLHVSTDEVYGSLPPGGFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 ++ + Y F + M+ A E + + V D AR ++ + Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKALPVYGDGQNERDWIHVEDHARGLVAVLER 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP 258 L G A +S IF GP+ ++ T RP Sbjct: 241 GRIGETYLLGGR----AVRSNLSVVRTLCAIFDRLRPEAGPHERLISFVTD-------RP 289 Query: 259 AYSC---LDCSKLANTHNIRI-STWKEGVRNIL 287 + +D SK R ++ + + + Sbjct: 290 GHDRRYAIDPSKAEAELGWRPTRSFDQALEETV 322 >gi|94986341|ref|YP_605705.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] gi|94556622|gb|ABF46536.1| UDP-glucose 4-epimerase [Deinococcus geothermalis DSM 11300] Length = 334 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 112/321 (34%), Gaps = 57/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGR----------PDI-----DLLKPKDFAS 44 MK +V+G G I Q E++ P++ DLL + Sbjct: 1 MKLMVVGGAGYIGSHTVRQLRQAGYEVVVFDNLSSGHAAALPPEVPLVRGDLLDLEAVKG 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIPCIYISTDYV 103 + PD +I+ AA V ++ P + N G+ + +A + +P ++ ST V Sbjct: 61 ALEAHKPDAVIHFAALIEVGESMRAPGRYYRNNVVGSLNLLQAIVKTRKVPLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNFL 159 + PI E +P +P ++YG++KL E + ++ + +ILR V + Sbjct: 121 YGTTDAVPIPEDAPLHPESVYGETKLMTERMIHAFHVAHGLPYIILRYFNVCGAAPDGQI 180 Query: 160 ------------LSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L+ L +R ++ + + TP L +A A + L Sbjct: 181 GEAHPHKTHLIELACLTALGQREQMMIFGADYPTPDGTCIRDYIHVLDLADAHVLAVQAL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR-- 257 + + +++ G S + + AE G P K I A R Sbjct: 241 AQGQRDAA--TYNVGLGYGF-SVLQVLDAVDAVIAEDGLPPLK-REI--------APRRP 288 Query: 258 --PAYSCLDCSKLANTHNIRI 276 P D ++ + Sbjct: 289 GDPPRLVADARRIVEELGFKP 309 >gi|258645455|ref|ZP_05732924.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260402806|gb|EEW96353.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 306 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 104/316 (32%), Gaps = 46/316 (14%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 MK L+ G G I LS ++ EI + +D+ + Sbjct: 1 MKILITGGAGFIGSHLSDALLAAGHEITIIDDLSSGTKDFLPKEAEFLKMDIRD-EKLTD 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D+I + AA T V + D P + IN G + +AA I+ S+ V Sbjct: 60 IFKERHFDIIYHEAAQTMVPASIDNPYLDADINISGMLRVLEAARKTDVQKIIFSSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFG---- 155 + P+ E P + YG +K E+ +A Y +Y +LR + VY Sbjct: 120 YGDNPALPLTENLIPAPSSFYGLTKWMTEKYLALYHKIYELSYTVLRYSNVYGPRQGADG 179 Query: 156 -SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + E + I++ D Q S + A + H + I + Sbjct: 180 EGGVIYIFAKSLAENKPITIFGDGRQTRDFISVHDVISANLAALHQ-------ADGEIIN 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 ++ + +S D A +A + T SCL K Sbjct: 233 VSTET-ELSLNDLASK-MIAAAGCSEDLLRYGPPRTGDIYR-------SCLSNQKAKTLL 283 Query: 273 NIRI-STWKEGVRNIL 287 + K+G+ + Sbjct: 284 HWTPSRNIKDGLTETI 299 >gi|119384853|ref|YP_915909.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] gi|119374620|gb|ABL70213.1| dTDP-glucose 4,6-dehydratase [Paracoccus denitrificans PD1222] Length = 345 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 83/248 (33%), Gaps = 39/248 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + + ++ + D+ Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGHRVVNLDSLTYAANLENVASVSGSPLYAFEQADIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 PD I++ AA + VD++ D P N G + +AA + Sbjct: 61 RAALDRILAEHRPDAIMHLAAESHVDRSIDGPGAFIETNVTGTYNLLEAARAWWTAQGRP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 G +ISTD VF L T E +P +P + Y SK A + V ++ Y V+ Sbjct: 121 EGFRFHHISTDEVFGSLGETGQFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPVVLT 180 Query: 146 RTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIE 201 + Y F + ++ A R I V D A A++ + Sbjct: 181 NCSNNYGPFHFPEKLVPVVILNALHGRPIPVYGDGGNVRDWLYVEDHADALLLVLEKGRI 240 Query: 202 NSDTSLRG 209 ++ G Sbjct: 241 GRSYNIGG 248 >gi|312869708|ref|ZP_07729855.1| UDP-glucose 4-epimerase [Lactobacillus oris PB013-T2-3] gi|311094757|gb|EFQ53054.1| UDP-glucose 4-epimerase [Lactobacillus oris PB013-T2-3] Length = 331 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 66/319 (20%), Positives = 103/319 (32%), Gaps = 58/319 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRPDI----------DLLKPKDFAS 44 M LV G G I + V+ E ++ G D D+ K Sbjct: 1 MAILVAGGAGYIGSHMVKNLVEHGEDVVVADNLSTGHRDAINPQAKFYEGDIRDRKFLDQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ +P F N G + +A GI I + ST Sbjct: 61 IFENEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHGIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P P+N YG SKL EE +A Y I A Y Sbjct: 121 YGVPEHMPIKETDPQKPINPYGLSKLMMEEMMAWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI-----IQIAHNLI 200 + + +R E+S+ D + TP T+ + +A + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTPDGTNVRDYVHVMDLTDAHILAIKYL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP-- 258 E + S F++ + G F+ E+A I K P RP Sbjct: 241 EAGNKSNA--FNLGSSTG------FSNKQMLEAAREVTG----KPIPAKMAP---RRPGD 285 Query: 259 AYS-CLDCSKLANTHNIRI 276 S K + Sbjct: 286 PDSLVAASDKAREVLGWKP 304 >gi|307544986|ref|YP_003897465.1| dTDP-glucose 4,6-dehydratase [Halomonas elongata DSM 2581] gi|307217010|emb|CBV42280.1| dTDP-glucose 4,6-dehydratase [Halomonas elongata DSM 2581] Length = 353 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 115/340 (33%), Gaps = 67/340 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 MK LV G G I ++ + D E++ V + D+ Sbjct: 1 MKFLVTGGAGFIGSAVVRELINETDHEVVNVDKLTYAGNLESLDSVSNNIRYNFVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD-------- 89 F PDV+++ AA + VD++ D P N G + +AA Sbjct: 61 DAPAINKLFEKHQPDVVMHLAAESHVDRSIDGPAEFVQTNVVGTTVLLEAARNYWKELKK 120 Query: 90 -----SIGIPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY 142 + G ++STD V+ L T E +P P + Y SK + V S+ + Sbjct: 121 SDPEKARGFRFHHVSTDEVYGDLDETKALFTEDTPYAPSSPYSASKAGSDHLVRSWYRTF 180 Query: 143 ----VILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQ 194 ++ + Y + + M+ A + + V D Q ARA+++ Sbjct: 181 GMPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGDGKQVRDWLYVEDHARALVK 240 Query: 195 IAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYR--IFTKQYP 252 +A E +T G + + V + P +YR I + Sbjct: 241 VAVEG-EVGETYNIGGHNEKTNLEVV-------ETLCSLLQELVPNDNLYRDLIT---FV 289 Query: 253 TKAHRP----AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 T RP Y+ D K+ T++ G+R + Sbjct: 290 T--DRPGHDLRYAI-DAGKIERELGWTPRETFETGLRKTV 326 >gi|114650309|ref|XP_522697.2| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Pan troglodytes] Length = 350 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVHAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|256851634|ref|ZP_05557022.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260661649|ref|ZP_05862561.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|282933283|ref|ZP_06338669.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] gi|256615592|gb|EEU20781.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 27-2-CHN] gi|260547706|gb|EEX23684.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 115-3-CHN] gi|281302579|gb|EFA94795.1| UDP-glucose 4-epimerase [Lactobacillus jensenii 208-1] Length = 329 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 87/227 (38%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M+ LV G G I + ++D +++ + R + D+L + Sbjct: 1 MRVLVTGGAGYIGSHTVNALLEDGNDVVVLDNLYTGHRQAVNKKAKFYHGDVLDTNLVTN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 ++ D +I+ AAY V ++ EP + N G ++ KA + G+ ++ S+ Sbjct: 61 ILMNEKIDAVIHFAAYLLVGESVQEPLKYYHNNVSGMISLLKAMKTAGVKNLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E +PTNP+N YG++KL E+ + I A Y Sbjct: 121 YGVPKDLPIKETAPTNPINPYGETKLMMEKIMRWTDQADGIKSIALRYFNVAGASLDASI 180 Query: 152 --SIFGSNFLLSMLRLAKERRE--ISVVCDQFGTP--TSALQIARAI 192 L+ + LA + ++ + + TP T+ + Sbjct: 181 GEDHAPETHLVPNILLAAKNGTGNFTIFGNDYNTPDGTNVRDYVHVV 227 >gi|313892801|ref|ZP_07826382.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442732|gb|EFR61143.1| NAD dependent epimerase/dehydratase family protein [Veillonella sp. oral taxon 158 str. F0412] Length = 307 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 107/321 (33%), Gaps = 56/321 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M V G G I L ++ ++ + ++D+ PK S Sbjct: 1 MNICVTGGAGFIGSHLVDRLIELGHNVLVIDNLSTGMHSFVHEAAQFIEMDVRDPKLV-S 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P ++ + AA T V + + P +N G + A + + S+ V Sbjct: 60 IFEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLLGLINVLDACRQVKVEQVLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L+ P+ E P + YG +KL E + Y N V R A VY + Sbjct: 120 YGDLAVLPLIEELSGMPSSFYGLTKLTAEGYLRIYRETFGLNTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + ++V D Q + A N+ ++ GI++ Sbjct: 180 EGGVISVFNRLIVEGQPLTVYGDGEQTRDFIYVDDVVDA------NIKAMGNSQCTGIYN 233 Query: 213 MTADGGP-----VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 ++ + G ++ I +V I +S L +K Sbjct: 234 VSTNKGTSVNELITRF---RAISGADFMVHYEAERVGDI------------KHSRLSNAK 278 Query: 268 LANTHNIRI-STWKEGVRNIL 287 +T ++G++ L Sbjct: 279 AERDFGFVATTTLEDGLQKTL 299 >gi|89094082|ref|ZP_01167025.1| dTDP-D-glucose 4;6-dehydratase [Oceanospirillum sp. MED92] gi|89081557|gb|EAR60786.1| dTDP-D-glucose 4;6-dehydratase [Oceanospirillum sp. MED92] Length = 350 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 84/254 (33%), Gaps = 43/254 (16%) Query: 1 MKCLVIGNNGQIAQSLSS--MCVQDVEIIRVG---------------------RPDIDLL 37 MK LV G G I +L + D EI+ V +D+ Sbjct: 1 MKLLVTGGAGFIGSALVRYILNATDDEIVNVDCLTYAGNLDSLPCASEFDRYAFEQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------ 91 + F PD +++ AA + VD++ + P N G + + Sbjct: 61 DHQSLTKVFAKHQPDAVMHLAAESHVDRSIEGPAQFIQTNIVGTFNLLDVSRRYYENLSE 120 Query: 92 ----GIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +ISTD V+ E +P P + Y SK + + V ++ Y Sbjct: 121 EKRSIFRFHHISTDEVYGDLDEGGFFTEETPYAPSSPYSASKASSDHLVRAWGRTYNLPV 180 Query: 143 VILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHN 198 VI + Y + + M+ A +E+ + D Q A+A+ + Sbjct: 181 VITNCSNNYGPYHFPEKLIPHMILNALSGKELPIYGDGQQIRDWLYVEDHAKALYTVVTQ 240 Query: 199 LIENSDTSLRGIFH 212 +T G ++ Sbjct: 241 G-GLGETYNIGGYN 253 >gi|126178155|ref|YP_001046120.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] gi|125860949|gb|ABN56138.1| NAD-dependent epimerase/dehydratase [Methanoculleus marisnigri JR1] Length = 333 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 110/322 (34%), Gaps = 58/322 (18%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGR------PDI-------------------D 35 + LV G G I + + E++ + P+I D Sbjct: 24 RILVTGGAGFIGSHIIERLLDDGHEVVCLDNFDPYYDPEIKKSNIQPFLENKNFTLEVGD 83 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IP 94 + D + + AA V + ++P +NA G + +A+ G Sbjct: 84 IRNRDTLTRLLEGT--DYVFHEAAQAGVRISVEDPIKPHEVNATGTLNLLEASRDSGVKK 141 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 I S+ V+ + P DE P P++ YG SKLA EE ++ Y V LR V Sbjct: 142 IINASSSSVYGTVEYLPFDEDHPRRPVSPYGVSKLAAEEYCRVFSELYGLKSVSLRYFTV 201 Query: 151 YSIFGSNFLLSML--RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 Y L + R A I++ D GT T + I++ ++ + Sbjct: 202 YGPRMRPDLAISIFTRKALANEPITIFGD--GTKTRDFTNIKDIVRANLIAMQKGE---- 255 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFT---KQYPTKAHRPAYSCLDC 265 G +++ G VS AE I + G S++ T T A D Sbjct: 256 GAYNI-GGGHRVSIQTLAETIIETT----GSSSEIRYADTVKGDAEHTFA--------DT 302 Query: 266 SKLANTHNIRIS-TWKEGVRNI 286 K R + +EG+R Sbjct: 303 KKAERNLGWRPQVSLEEGLRRY 324 >gi|218885249|ref|YP_002434570.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756203|gb|ACL07102.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 340 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 57/327 (17%), Positives = 101/327 (30%), Gaps = 55/327 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMC---VQDVEIIRVGR------------------------PD 33 M+ LV G G I + + DV ++ + + Sbjct: 1 MRLLVTGGCGFIGTNFVRLVIDRRPDVTVVNLDKLTYAGNPLNLADVEKTHGGTRYFFEH 60 Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 D+ D ++N AA T VD++ D+P N G + AA G Sbjct: 61 ADIADADAVRRILAQHRIDAVVNFAAETHVDRSIDDPAPFVVTNVLGTQTLLTAAREAGV 120 Query: 93 IPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 +++STD V+ L E +P P + Y SK AG+ ++ Y VI R Sbjct: 121 TRFVHVSTDEVYGTLGPEGRFTESTPLAPNSPYSASKAAGDLMARAWFETYGYPVVITRC 180 Query: 148 AWVYSIF--GSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDT 205 + Y + + M+ A + V D + L+ Sbjct: 181 SNNYGPYQFPEKLIPLMIGRAGRDETLPVYGDGM----NVRDWIHVDDHCRGVLLALEKG 236 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC--- 262 +++ GG + + + G P S + + RP + Sbjct: 237 RPGAVYNF---GGAAERPNI-KVVRAILRLVGKPESLIRHVTD--------RPGHDRRYA 284 Query: 263 LDCSKLANTHNIRI-STWKEGVRNILV 288 +D S A ++ G+ + Sbjct: 285 MDFSLAAQELGYTPEYDFERGLAETVA 311 >gi|146306900|ref|YP_001187365.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] gi|145575101|gb|ABP84633.1| dTDP-4-dehydrorhamnose reductase [Pseudomonas mendocina ymp] Length = 285 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 111/306 (36%), Gaps = 45/306 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--RPD-----------------IDLLKPKD 41 M+ LV+G G + ++ + D G R +D+L Sbjct: 1 MRVLVLGVTGMLGNAVFRVFSADAAYQAWGTLRSASALHHFPQDSHARLLCGVDVLDQDT 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV+IN ++P A INA +A+ + G I++STD Sbjct: 61 LTSVMARVKPDVVINCVGLIKQLADANDPLTALPINAMLPHRLARLCELAGARLIHVSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E ++ ++YGKSK GE N + LRT+ + GS L Sbjct: 121 CVFSGRK-GMYVEGDLSDAEDLYGKSKYIGE---LHEWPNAITLRTSIIGHELGSCHALV 176 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L+++ + F G PT +++AR + T L G++ + A+ P+ Sbjct: 177 DWFLSQQNGVLGFARAVFSGLPT--VELARVMKDFVI-----PHTELAGLYQVAAE--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + D A + G ++ + LD S+ N W Sbjct: 228 TKLDL----LRLLAAQYGKQIEINPDSSVVIDR--------SLDGSRFRNATGYVAPAWP 275 Query: 281 EGVRNI 286 E VR + Sbjct: 276 ELVRVM 281 >gi|312142515|ref|YP_003993961.1| UDP-glucose 4-epimerase [Halanaerobium sp. 'sapolanicus'] gi|311903166|gb|ADQ13607.1| UDP-glucose 4-epimerase [Halanaerobium sp. 'sapolanicus'] Length = 327 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 109/334 (32%), Gaps = 69/334 (20%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG-----RPDI---------DLLKPKDFASF 45 MK L+ G G I L + + + + + D+ + Sbjct: 1 MKILLTGGAGYIGSHVLKRLLDAGHDTVTIDNLKKGHKEAVLGGEFIEGDIGNKELLHRV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA + V ++ +P + N A + + ++ ST V+ Sbjct: 61 FAEHKIEGVIHLAADSLVGESMKDPGKYYHNNVAKALNLLEVMVEHDVNYLVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 PI E PTNP N+YG+SKL E+ + Y + + + Y + + Sbjct: 121 GEPESIPIAEDHPTNPENVYGESKLFFEKILKRYDQIHGLKYISLRYFNAAGADPEAKIG 180 Query: 165 LAKE----------------RREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 A + R +I + D + T +A A + L Sbjct: 181 EAHDPETHLIPIVLETALGIRDKIYIFGDDYPTKDGSCIRDYIHVNDLADAHVLAVEALA 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-----PTKA 255 E ++ I+++ G E I + V ++ K + +A Sbjct: 241 EGKNSD---IYNLGCGDG----YSVKEVI-----------AAVKKVTQKDFEVELSDRRA 282 Query: 256 HRPAYSCL--DCSKLANTHNIRISTWKEGVRNIL 287 PA L K+ N N + + + I+ Sbjct: 283 GDPA--VLIASSDKIKNDLNWQPQY--QSLEKII 312 >gi|71906901|ref|YP_284488.1| NAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] gi|71846522|gb|AAZ46018.1| dTDP-4-dehydrorhamnose reductase [Dechloromonas aromatica RCB] Length = 284 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 110/306 (35%), Gaps = 46/306 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-----------------IDLLKPKD 41 MK LVIG +G + ++ + + + E+ R ID+ Sbjct: 1 MKALVIGVSGMLGNAMVRVLAEAKEWEVHGTLRSPSAKRFFAPQIAARLHDGIDVDHEDA 60 Query: 42 FASFFLSFSPDVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 F P +++N + V+ A D+P A INA +A+ ++IST Sbjct: 61 LVEIFDKVRPQLVLNCVGHVKQVETA-DQPLHAIPINALLPHRLARLCGLTQSRLVHIST 119 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VF G SR E + L++YG++KL GE + + LRT+ + S+ L Sbjct: 120 DCVFTG-SRGAYRESDFPDALDLYGRTKLLGEVDY----PHALTLRTSIIGHELQSSHGL 174 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 LA+ C + + + + ++I L G++H+ A P+ Sbjct: 175 IEWFLAQYG-----SCQGYTRAIFSGLPTVVLAAVVRDVIAQR-PDLHGVYHLAAK--PI 226 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + D A+ G + Q LD S+ W Sbjct: 227 AKYDL----LRLVAQVYGKQIDIIPDDQVQIDR--------SLDGSRFRAATGYVAPEWP 274 Query: 281 EGVRNI 286 E V+ + Sbjct: 275 ELVKTM 280 >gi|323703005|ref|ZP_08114661.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] gi|323532018|gb|EGB21901.1| NAD-dependent epimerase/dehydratase [Desulfotomaculum nigrificans DSM 574] Length = 306 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 107/323 (33%), Gaps = 57/323 (17%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 M+ LV G G I + ++ E++ V +D+ P A Sbjct: 1 MRVLVTGGAGFIGSHIVDALLKAGHEVLVVDNLSSGKKENLPPEVPFYQMDITDP-GIAG 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F + P +I+ AA AV + +P +N G + +AA + + ++ S+ V Sbjct: 60 IFEAARPQAVIHQAAQVAVPVSLRDPIFDARVNIIGTLNLLEAARRVKVGKMVFASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 + + P+DE PL+ YG SK E + +Y Y + TA Y+ + Sbjct: 120 YGNPNYLPVDEDHDLRPLSGYGISKHTVERYLEAYQELYGLSWTALRYANVYGPRQDAQG 179 Query: 164 R-----------LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 L +R +I +Q +A + I + Sbjct: 180 EGGVVAVFIDKLLHNQRPQIFGDGEQTRDFVYVKD-------VAAANVAALSAGDNQILN 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKLA 269 ++ ++ + G S + +Y RP +S LD SK Sbjct: 233 ISTGKAST-----VNELYSLLKQTIG--SALEP----EY--APPRPGDIVHSYLDNSKAV 279 Query: 270 NTHNIRI-----STWKEGVRNIL 287 N + KE V + L Sbjct: 280 ARLNWQPQYELARGLKETVEHYL 302 >gi|32474159|ref|NP_867153.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] gi|32444696|emb|CAD74698.1| UDP-glucose 4-epimerase [Rhodopirellula baltica SH 1] Length = 405 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 100/281 (35%), Gaps = 44/281 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 MK V+G G I +++ + E++ + DL S Sbjct: 34 MKVFVVGGAGYIGSHAVALLLDAGHEVVVFDNLSRGHAKSVPEGLLVEGDLNDQAKLTSL 93 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 S D +++ AA+ V ++ +P I + N ++ +A + ++ ST + Sbjct: 94 LKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMRAADVKKIVFSSTTATY 153 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------S 152 PI E +P NP+N YG SKL E+ +A Y + Y A Y Sbjct: 154 GQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYAALRYFNAAGARPDGTIG 213 Query: 153 IFG---SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-----AHNLIENS 203 S+ + +L++A +R IS+ D + PT R I + AH + Sbjct: 214 EHHDPESHLIPIVLQVALGQRESISIFGDDY--PTPDGTCIRDYIHVDDLGDAHLRALDR 271 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWES-AERGGPYSKV 243 GI G S I A G P +V Sbjct: 272 LKPGEGIQVNLGTGRGTS----VREIVDACRAVTGHPIPEV 308 >gi|315930948|gb|EFV09923.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 327] Length = 324 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 102/312 (32%), Gaps = 47/312 (15%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + + I + R DLL Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNNYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLT 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 NVFKQEKIDAVVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASNGGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G ++ G S + I + G + + A Y+ Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEVVSGKKCPINYTPRRD-GDPAR--LYA-- 290 Query: 264 DCSKLANTHNIR 275 D K + Sbjct: 291 DNKKAKEILSWE 302 >gi|119502956|ref|ZP_01625041.1| putative dTDP-L-rhamnose synthase [marine gamma proteobacterium HTCC2080] gi|119461302|gb|EAW42392.1| putative dTDP-L-rhamnose synthase [marine gamma proteobacterium HTCC2080] Length = 291 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 124/296 (41%), Gaps = 23/296 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L++G++ I SL + Q E+I+V + + + PD+I++ Sbjct: 1 MRILLLGSDTAIGHSLRAFIPPLQRHELIQVPLEATRWTRQRPAKKLLKTSEPDLILDAR 60 Query: 59 AYTAVDKAED-EPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSP 117 + +D+ + EP E + + AA +G + +S+ VF G + P E Sbjct: 61 LVSLIDRVDALEPAD-----IERSQWLGSAAAKLGCHYLLLSSSRVFSGELKRPYRESDK 115 Query: 118 TNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCD 177 + + G + E ++ ++ +LR WV+S G + + +L ++ + ++ + Sbjct: 116 ADAQDELGAILVEAETQLRELVDSIFVLRLGWVFSGRGPSAMNRILDSLRDGKILTASDN 175 Query: 178 QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADFAEYIFWESAE 235 + P + ++AR + + RG+FH ++G G S+A+ A + A Sbjct: 176 RRDCPVHSAEVARVAAGVIDQI--GVGAPGRGLFHYGSEGDTGYFSFAEAAVACASQFAR 233 Query: 236 RGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE----GVRNIL 287 +++ T PT A L+C+ + + I+ W++ VR + Sbjct: 234 FADAREQLHEDTT--LPT-----ANRSLECTAIRHQFGIQQRPWRDFVERAVRRYI 282 >gi|307721409|ref|YP_003892549.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] gi|306979502|gb|ADN09537.1| dTDP-4-dehydrorhamnose reductase [Sulfurimonas autotrophica DSM 16294] Length = 291 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 90/225 (40%), Gaps = 22/225 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD--------IDLLKPKDFASFFLSFSP 51 K LV+G+ G I + + D E+ + +D+ +F + S P Sbjct: 4 KVLVLGSTGLIGHQIYNYLKLNSDYELFNMSYRKKLQDDTILVDVRDENNFLNIIKSLKP 63 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D I+N ++ A + PE A INA +A+ A + I+ISTD VF G + P Sbjct: 64 DYIVNCIGI-LINGANENPENAIFINAYMPHRLARLAGELDAKLIHISTDCVFSGNKKEP 122 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + + Y K+K GE + ++ LRT+ V + ++ Sbjct: 123 YVESDEKDGKDTYAKTKGLGEI----IDDKHLTLRTSVVGPELKEDGEELFHWFMNQKGT 178 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 I+ + + +++A + + + G++H+T + Sbjct: 179 INGFTKAIWSGVTT-------LELAKAVKWAVENDITGLYHITNN 216 >gi|227529528|ref|ZP_03959577.1| UDP-galactose 4-epimerase [Lactobacillus vaginalis ATCC 49540] gi|227350613|gb|EEJ40904.1| UDP-galactose 4-epimerase [Lactobacillus vaginalis ATCC 49540] Length = 331 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 65/319 (20%), Positives = 105/319 (32%), Gaps = 58/319 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EII-----RVGRPDI----------DLLKPKDFAS 44 M LV G G I + V+ E++ G D D+ K Sbjct: 1 MAILVAGGAGYIGSHMVKDLVEHGQEVVVADNLSTGHRDAINPKAKFYEGDIRDRKFLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + + +++ AA++ V ++ +P F N G + +A I I + ST Sbjct: 61 IFDNEDIEAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMRDHNIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG SKL E+ + Y I A Y Sbjct: 121 YGVPEHMPIKETDPQNPINPYGLSKLMMEKMMHWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI-----IQIAHNLI 200 + + +R+E+S+ D + TP T+ + +A + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRKELSIFGDDYNTPDGTNVRDYVHVMDLADAHILAIKYL 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP-- 258 E + S F++ + G + + I + E G I K P RP Sbjct: 241 EAGNESNA--FNLGSSTGFSN-----KQILEAAREVTG-----EPIPAKIAP---RRPGD 285 Query: 259 AYS-CLDCSKLANTHNIRI 276 S K N Sbjct: 286 PDSLVAASDKARNVLGWDP 304 >gi|227545148|ref|ZP_03975197.1| UDP-galactose 4-epimerase [Lactobacillus reuteri CF48-3A] gi|227184880|gb|EEI64951.1| UDP-galactose 4-epimerase [Lactobacillus reuteri CF48-3A] Length = 331 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 80/227 (35%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRPDI----------DLLKPKDFAS 44 M LV G G I + +++ E ++ G D D+ + Sbjct: 1 MSILVAGGAGYIGSHMVKDLIENGEDVVVADNLSTGHRDAINPKAKFYEGDIRDRQFLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ +P F N G + +A I I + ST Sbjct: 61 IFDNEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG SKL EE +A Y I A Y Sbjct: 121 YGVPEHMPIKETDPQNPINPYGLSKLMMEEMMAWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+S+ D + TP T+ + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTPDGTNVRDYVHVM 227 >gi|171184952|ref|YP_001793871.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] gi|170934164|gb|ACB39425.1| dTDP-glucose 4,6-dehydratase [Thermoproteus neutrophilus V24Sta] Length = 320 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 117/313 (37%), Gaps = 44/313 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPD-----------IDLLKPKDFA 43 M+ +VIG G + + E++ GR + D+ + Sbjct: 1 MRVVVIGGAGFMGSNFVRHVAGRGEVLVYDKLTYAGRLENLRGVEVEFVRGDVANFELLF 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYV 103 F PDV++N AA T VD++ ++P + N G ++ +AA +G ++ISTD V Sbjct: 61 YVLSRFRPDVVVNFAAETHVDRSINDPAPFLTTNVWGVYSVLEAARRLGFLYVHISTDEV 120 Query: 104 FDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN- 157 + DE P P + Y SK AG+ V +Y Y I+R Y F Sbjct: 121 YGDLAGGGEADESWPMRPSSPYSASKAAGDLLVQAYGRTYGVRFRIVRPCNNYGPFQHPE 180 Query: 158 --FLLSMLRLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 +++RL R I Q RA+ + ++ GI+++ Sbjct: 181 KLIPRTIVRLLLGRPATIYGDGRQVRDWLYVGDFVRALEVVIERGVDG------GIYNVC 234 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 A G P S + E I ++ GG V + A R C +L Sbjct: 235 A-GQPASVREVVERI---ASALGGSVKYVRGRPGEDM-RYAMR-------CDRLRGLGWR 282 Query: 275 RISTWKEGVRNIL 287 + +EG+R + Sbjct: 283 PEVSLEEGLRRTV 295 >gi|313896794|ref|ZP_07830342.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974711|gb|EFR40178.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 137 str. F0430] Length = 329 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 108/317 (34%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV G G I ++ + + E++ V P D+ Sbjct: 1 MAILVCGGAGYIGSHAVHQLIARGEEVVIVDNLQTGHRGALHPQATFCKGDIRDAAALDR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S + +I+ AA + V ++ ++P + F+ N G + +A G ++ ST V Sbjct: 61 IFTERSIEAVIHFAANSLVGESMEQPLLYFNNNVYGMQVLLEAMVRHGVDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E TNP N YG++KL E+ + + YV LR + Sbjct: 121 YGEPKRVPIREDDETNPTNAYGETKLTMEKMMKWVSRASGVRYVSLRYFNAAGALPDGSI 180 Query: 160 LSMLRL------------AKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + R I+V D + TP T ++ +A + D Sbjct: 181 GEDHKTETHLIPLILQVPTGRRDHITVYGDDYLTPDGTCLRDYIH-VVDLADAHMRALDY 239 Query: 206 SLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 RG IF++ + G F+ +AE+ + I ++ A Sbjct: 240 LRRGGESDIFNLGSGSG------FSVKEMIAAAEKATGKAIAVEIGARRAGDPAQ----- 288 Query: 262 CL--DCSKLANTHNIRI 276 L K + Sbjct: 289 -LIASSEKARTVLGWQP 304 >gi|290968979|ref|ZP_06560514.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] gi|290780935|gb|EFD93528.1| NAD-binding protein [Megasphaera genomosp. type_1 str. 28L] Length = 309 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 95/308 (30%), Gaps = 48/308 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M L+ G G I + +I GR + D+ + + Sbjct: 1 MNILITGGAGFIGSHIGDALIAAGHRVIVVDNLSTGRKENIPPQAVFYEADIRDREYMEN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPCIYISTDYV 103 F + + + AA T V + P +N G I + I+ S+ V Sbjct: 61 IFSQEHIEAVYHEAAQTMVPYSLAHPWEDAELNVMGLVGILELCRRHTVRKFIFSSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFG---- 155 + +R P+ E T PL+ YG +K E + Y + YVILR A VY Sbjct: 121 YGDNTRVPLKETEATTPLSFYGLTKCTAEAYIRMYHDIFQVPYVILRYANVYGERQGGNG 180 Query: 156 -SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + +EI+V D Q +ARA N+ G ++ Sbjct: 181 EGGVVFVFSQALAQGKEITVFGDGEQTRDFVYVKDVARA------NVCALQANGTEGTYN 234 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVY--RIFTKQYPTKAHRPAYSCLDCSKLAN 270 + + + G + V+ + S L +K Sbjct: 235 IGTNIETT-----VNALKEMLVYIAGTPTHVHYEPARSGDIYR-------SVLANTKAVQ 282 Query: 271 THNIRIST 278 +T Sbjct: 283 ELGWEPTT 290 >gi|329922326|ref|ZP_08278003.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] gi|328942189|gb|EGG38460.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus sp. HGF5] Length = 392 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 101/304 (33%), Gaps = 46/304 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVG----------RPDIDLLKPKDFA-----S 44 MK +V G G I L + V Q E+ + + +L D + Sbjct: 80 MKMVVTGGAGFIGSHLVNGLVNQGYEVHVIDNLTTGDPGRLHSEA-ILHVADVNSQQTTA 138 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + PDV+ + AA V ++ EP + N G I A G ++ ST V Sbjct: 139 YISVLKPDVVFHLAAQADVQRSIQEPRLDADANVMGTINILDACRKAGVRKIVFASTSGV 198 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + L R+ + E P NP++ Y SK+AGE+ + Y Y ILR VY + Sbjct: 199 YGDLERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQYTILRYGNVYGPGQTAKG 258 Query: 157 --NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + + + D Q + A + + ++ G H Sbjct: 259 EGGVVAVFGERLYQGKPLPIYGDGLQTRDFIYVKDVVDANLASILHGDQSVLHVSTGTDH 318 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + D + + + +K+ I +SCL+ + Sbjct: 319 SVN-----TLVDLISRLHPDRIDVDYLPAKIGDI------------RHSCLNNERTRERL 361 Query: 273 NIRI 276 Sbjct: 362 RWSP 365 >gi|312880524|ref|ZP_07740324.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260] gi|310783815|gb|EFQ24213.1| dTDP-4-dehydrorhamnose reductase [Aminomonas paucivorans DSM 12260] Length = 301 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 60/312 (19%), Positives = 108/312 (34%), Gaps = 51/312 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR------------------PDIDLLKPKD 41 + L++G G + + + +E+ R P +D Sbjct: 5 RVLILGGTGMVGHKMFQVLSSRPHLEVYATARDLHGLEGWFDDEALTRIRPHVDAADFDT 64 Query: 42 FASFFLSFSPDVIINPAAYT-AVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 S PDV++N + AE +P A ++NA+ I+ + I I T Sbjct: 65 VIRALASVQPDVVVNCIGLIKQLPLAE-DPLTAITVNAQLPHRISLICRAAKARMIQIGT 123 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLL 160 D VFDG R E P++ ++YG++K GE + + LRT+ + L Sbjct: 124 DCVFDGT-RGGYREDDPSDAKDLYGRTKYLGE----VTYPHCITLRTSIIGHELKGRLSL 178 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 LA+ + + + + ++AR + L G++H++ D P+ Sbjct: 179 VEWFLAQ-KAPVRGYTRALYSGLTTPELARVVADYVL-----PHPELNGLYHLSVD--PI 230 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S D A G + + + LD ++ T TW Sbjct: 231 SKYDL----LRLLATHYGVSTPIEP-----FDRVVI---DRSLDSTRFRETTGYFPPTWP 278 Query: 281 ---EGV-RNILV 288 E + R+ L Sbjct: 279 ELVEALHRDYLA 290 >gi|89068414|ref|ZP_01155817.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] gi|89046068|gb|EAR52127.1| dTDP-glucose 4,6-dehydratase [Oceanicola granulosus HTCC2516] Length = 352 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 112/334 (33%), Gaps = 57/334 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + V + +++ + D+ Sbjct: 1 MKILVTGGAGFIGSAVVRLSVSRGHQVVNLDALTYAACLASLASVADSPLYAFEQADIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 F +PD +++ AA + VD++ D P N G + +AA + Sbjct: 61 RAALDQVFAKHAPDAVMHLAAESHVDRSIDGPGDFVETNITGTYNMLEAARAWWVQAGRP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 G ++STD VF L P E +P +P + Y SK A + V ++ Y V Sbjct: 121 EGFRFHHVSTDEVFGSLPADPEMKFTEETPYDPRSPYSASKAASDHLVRAWHETYELPVV 180 Query: 144 ILRTAWVYSIFG---SNFLLSMLRLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNL 199 + + Y + + +L + I D A A++ + Sbjct: 181 LTNCSNNYGPYHFPEKLVPVVILNALAGKELPIYGRGDNIRDWLYVEDHADALLTVLERG 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 +++ + + E + A K + Q A RP Sbjct: 241 ALGRS------YNIGGENERTNL----ELVHTLCAILNELRPKASGSYADQIAFVADRPG 290 Query: 259 ---AYSCLDCSKLANTHNIRIS-TWKEGVRNILV 288 Y+ + S++ + R S T +EG+R + Sbjct: 291 HDGRYAI-EPSRIRDELGWRPSVTLEEGLRRTVQ 323 >gi|315230849|ref|YP_004071285.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] gi|315183877|gb|ADT84062.1| UDP-glucose 4-epimerase [Thermococcus barophilus MP] Length = 308 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 106/314 (33%), Gaps = 49/314 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG---------RPD------IDLLKPKDFASFFL 47 +V G G I ++ +D E++ + P+ D+ + A Sbjct: 7 IVVTGGAGFIGSHIAEELSEDNEVVVIDNLYSGKVENVPENVKFIQADIRDYESIAEIIS 66 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D + + AA +V ++ ++P + IN G I KA I+ S+ V+ Sbjct: 67 QA--DYVFHEAALVSVVESVEKPILTEEINVLGTLNILKALSEGHGKLIFASSAAVYGDN 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF-----GSNF 158 P+ E PL+ YG +K++GE + Y V LR V+ + Sbjct: 125 QNLPLKEDEKPKPLSPYGVTKVSGEYYCRVFYELYGVPTVTLRYFNVFGERQGYNQYAGV 184 Query: 159 LLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + A + + + D Q + +A I +A N + A Sbjct: 185 ISIFINRALKNEPLIIFGDGKQTRDFIYVKDVVKANILVAEKEKANGEVFN------VAR 238 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLANTHN 273 G + + A I + S + + RP +S D SK+ Sbjct: 239 GERTTILELAMKIIDAT----NSSSSII------FDKP--RPGDIKHSQADISKIKKLGF 286 Query: 274 IRISTWKEGVRNIL 287 + KEG+ + Sbjct: 287 KPDYSLKEGLLRTI 300 >gi|152997505|ref|YP_001342340.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] gi|150838429|gb|ABR72405.1| dTDP-4-dehydrorhamnose reductase [Marinomonas sp. MWYL1] Length = 292 Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 119/300 (39%), Gaps = 34/300 (11%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPD---IDLLKPKDFASFFLSFSPDVIINPA 58 + L++G+ ++ SL + E + + +D+ + + + DVII+ Sbjct: 12 RILLLGSGTEVGSSLLLLSEGKNEFEWLCPEESLLLDVGRRAELDAM----QFDVIID-- 65 Query: 59 AYTAVDKAEDEPEIAFSI-NAEG--AGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 A + + +++ N G + ++ I IS+ VF G P E Sbjct: 66 ALS----------LRYALQNDYGKFQSTLRYLSEQANTTLIMISSARVFSGNKDVPYAET 115 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + Y K+ + E V S N ++LRT W++S G +F+ L L ++ ++ Sbjct: 116 DVPDSSEPYAKALIEAESIVLSNPEN-IVLRTGWLFSGKGDDFVCRTLGLIQDGVNLAYK 174 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 D G+PT + R ++ I + +GI+H +SW E I S++ Sbjct: 175 DDLIGSPTPVSDLVRVVLSIVSQGYYGAQ--NKGIYHYCC-AEEISWIRLVEAILATSSQ 231 Query: 236 RGGPY-SKVYRIFTKQYP----TKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 +V I +P T A L C K+ N I+ W+ +R+++ + Sbjct: 232 FDPKAQVEVEAIG-DSFPEVQETSAM--QRQSLSCRKIFNHFGIKQRPWRSKLRSLVKEL 288 >gi|110666554|gb|ABG81793.1| QnlA [Escherichia coli] gi|110666571|gb|ABG81809.1| QnlA [Escherichia coli] Length = 289 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 118/306 (38%), Gaps = 49/306 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGR-----------------PDIDLLKPKDF 42 K L++G NG + SL D E++ R ++D++ K Sbjct: 4 KILIVGANGMLGSSLLRYFSSIGDYEVLGTTRSMVVAKQLEQKHNVKIIDNVDVIDFKRL 63 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 + + P+++ N A ++ IN+ +A+ + I+ STD Sbjct: 64 ETVVVEHKPNIVFNCVGIIKQLDAAKNNILSIEINSLLPHKLAQLCSAHSAKLIHFSTDC 123 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 +F G E ++ +++YGKSK GE + N ++ LRT+ + GSN L Sbjct: 124 IFKGTKGN-YVEDDESDAIDLYGKSKFLGEVEY----NGHLTLRTSIIGHELGSNHSLVD 178 Query: 163 LRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L++ ++ + + + PT + ++ H + ++ + G+FH++ + P+ Sbjct: 179 WFLSQ-KKSVKGFTNAIFSGLPTCY------MAEVIHKYVLPNNLA--GLFHLSVE--PI 227 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S D G + + T ++ K R S L N N +W Sbjct: 228 SKYDL----LNIIKIVYGVSTDIEP--TNEF--KIDRSLNSTL----FRNKTNFVPESWD 275 Query: 281 EGVRNI 286 + + + Sbjct: 276 KLIEKM 281 >gi|257468983|ref|ZP_05633077.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|317063231|ref|ZP_07927716.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] gi|313688907|gb|EFS25742.1| UDP-glucose 4-epimerase [Fusobacterium ulcerans ATCC 49185] Length = 329 Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 67/318 (21%), Positives = 103/318 (32%), Gaps = 56/318 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE------IIRVGRPDI----------DLLKPKDFAS 44 M LV G G I ++ + E ++ G D DL + Sbjct: 1 MAILVCGGAGYIGSHVTRALIDSGEEVIVLDNLQTGHVDAVHEKAKLVLGDLRDDEFMER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +I+ AA++ V ++ +EP F N G + KA ++ ST Sbjct: 61 VFKDNKIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKAMKKYNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFG---- 155 + PI E T P N YG+SKLA E+ + Y I TA Y Sbjct: 121 YGEPENIPILESDATFPTNPYGESKLAVEKMLKWCDKAYGIKYTALRYFNVAGAHPTGEI 180 Query: 156 -------SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 S+ + +L++A +R I + D + PT+ R I + + Sbjct: 181 GEDHSPESHLIPIILQVALGKREHIGIYGDDY--PTADGTCIRDYIHVMDLADAHILALK 238 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV---------YRIFTKQYPTKAHRP 258 R +GG IF G +V + I P +A P Sbjct: 239 R-----LNNGGE-------SEIFNLGNGEGFSVKEVIEVARKVTKHPIPAIVSPRRAGDP 286 Query: 259 AYSCLDCSKLANTHNIRI 276 A K + Sbjct: 287 AKLVASSDKAMKELKWKP 304 >gi|325967604|ref|YP_004243796.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] gi|323706807|gb|ADY00294.1| dTDP-glucose 4,6-dehydratase [Vulcanisaeta moutnovskia 768-28] Length = 326 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 60/322 (18%), Positives = 109/322 (33%), Gaps = 59/322 (18%) Query: 2 KCLVIGNNGQIAQSLSSM----------------------CVQDVEIIRVGRPDIDLLKP 39 + LV G G I + +DVE+I+ D+ Sbjct: 5 RILVTGGAGFIGSNFVRFSRYLGNDITVYDAFTYAGRYENLPRDVEVIK-----GDITDY 59 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 P++I+N AA T VD++ PE N G I K G I+IS Sbjct: 60 DRLKDVVQRIHPEIIVNFAAETHVDRSIVNPEPFIRTNVYGVYTILKIVKEFGTRLIHIS 119 Query: 100 TDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 TD V+ + P DE + P N Y +K AG+ + ++ Y +I+R + Y + Sbjct: 120 TDEVYGDMEGKEPADENTVLRPSNPYAATKAAGDALIMAFHRTYGVDAIIIRPSNNYGPY 179 Query: 155 GSNFLLSMLRLAKERREISVVCDQFGTP----TSALQIARAIIQIAHNLIENSDTSLRGI 210 L + + +I VV G+ RA++ I + ++ G Sbjct: 180 QYPEKLIPRTVIRALNDIPVVVHGDGSQRRDWLYVEDTCRAVLTIIEKGVSGEIYNVPG- 238 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSCLDCS 266 + + + ++ + R + RP Y + Sbjct: 239 ---FNEKSIL-------QVVEDALRVLNKPKALIRFVSD-------RPGQDRRY-IMKGD 280 Query: 267 KLANTHNIRISTWKEGVRNILV 288 K+ + + W++G++ + Sbjct: 281 KILSLGWRPLVIWEDGLKKTIK 302 >gi|159042020|ref|YP_001541272.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] gi|157920855|gb|ABW02282.1| NAD-dependent epimerase/dehydratase [Caldivirga maquilingensis IC-167] Length = 301 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 107/322 (33%), Gaps = 54/322 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD-------------------IDLLKPK 40 M+ + G G I + + + VE++ + + D+ Sbjct: 1 MRVPITGGAGFIGHNTAIYLRERGVEVVVLDSLERSTEYAVRRLRDAGVSIIRGDVGDSS 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIST 100 DV+I+ AAY V ++ P N G +A G P ++IS+ Sbjct: 61 TVGPLVGDS--DVVIHAAAYIDVHESMQRPADYVRNNVVGTTVVAHECLRHGKPMVFISS 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFGSN 157 V+ R PI E P P++ YG SK+ EE V + +VILR VY ++ Sbjct: 119 AAVYGNPVRLPIPEDHPLRPISPYGLSKVLSEEVVRFFGGLGLRFVILRPFNVYGPGQNS 178 Query: 158 FLLSMLRLAKER------REISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 ++ ER I +Q L +AR I ++ G Sbjct: 179 AYAGVIMRFIERVKRGLPPVIYGDGNQARDFIHVLDVARVIERVITG-------DYWGET 231 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 G P D A + G P + RP S D SK Sbjct: 232 FNVGTGVPTRIIDLARLVMGLFGMDGEPL----------FDKP--RPGDIRDSYADISKA 279 Query: 269 ANTHNIRIS-TWKEGVRNILVN 289 + S + ++G+R ++ Sbjct: 280 RSILGFTPSISLEDGLRGLMYE 301 >gi|332216591|ref|XP_003257436.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Nomascus leucogenys] Length = 350 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|308175139|ref|YP_003921844.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens DSM 7] gi|307608003|emb|CBI44374.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens DSM 7] gi|328555109|gb|AEB25601.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens TA208] gi|328913463|gb|AEB65059.1| NAD-dependent epimerase/dehydratase family protein [Bacillus amyloliquefaciens LL3] Length = 309 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 88/249 (35%), Gaps = 29/249 (11%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV----------QDVEIIRVGRPDIDLLKPKDFASFFLSF 49 MK +IG G I L+++ Q D+L Sbjct: 1 MKNIAIIGGAGFIGSELAALLQTKGYHTIIADQKKPAFDTEYRHTDILDRTSLRESLRGA 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLS 108 D +++ AA VD E +N EG +A+ +G ++ S+ VF Sbjct: 61 --DAVVHLAAMVGVDSCRSNEEDVIRVNFEGTKNVAEVCGELGISTLLFSSSSEVFGDSP 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSML 163 P E S P + YGK+KL EE + ++ + +R ++++G + Sbjct: 119 DFPYTETSRKLPKSAYGKAKLQSEEYLREQASDKLHIRVVRYFNVYGPKQREDFVINKFF 178 Query: 164 RLAKERREISVVCD--QFGTPTSALQIARAI-IQIAHNLIENSDTSLRGIFHMTADGGPV 220 LA+ E+ + D Q + I + + H D ++ + P+ Sbjct: 179 SLAENGSELPLYGDGGQIRCFSYISDIVNGTYLALVHEGAVFEDFNI-------GNDQPI 231 Query: 221 SWADFAEYI 229 + + AE + Sbjct: 232 TIKELAEKV 240 >gi|297694274|ref|XP_002824410.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Pongo abelii] Length = 350 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|197106764|ref|YP_002132141.1| dTDP-glucose 4,6-dehydratase [Phenylobacterium zucineum HLK1] gi|196480184|gb|ACG79712.1| dTDP-glucose 4,6-dehydratase [Phenylobacterium zucineum HLK1] Length = 354 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 107/342 (31%), Gaps = 76/342 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGR---------------------PDIDLLK 38 MK L+ G G I ++ V + E++ + D+ Sbjct: 1 MKILITGGAGFIGSAVVRRAVREGHEVVNLDVLAYSANLENVESVASHPAYAFEQADICD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPC--- 95 + F PD +++ AA + VD++ + P N G + +AA + Sbjct: 61 KARVEAIFAQHQPDAVMHLAAESHVDRSVEGPLDFVRANVMGTAVMLEAARAYWSRLEGA 120 Query: 96 -------IYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 ++STD VF E +P +P + Y SK + + V ++ Y V Sbjct: 121 RKDAFRFHHVSTDEVFGALGEDGEFTEETPYDPTSPYSASKASADHLVRAWGRTYGLPVV 180 Query: 144 ILRTAWVYSIF--GSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAII------ 193 I + Y + + +++ A E + I V D Q A A++ Sbjct: 181 ITNCSNNYGPYQFPEKLIPTVITRALEGKSIPVYGDGRQVRDWLHVDDHAEALLLALTKG 240 Query: 194 QIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT 253 ++ D R I D I E KV T Sbjct: 241 ELGETYCIGGDADHRNI-------------DVVRMICAE-------LDKVAPANTPHADK 280 Query: 254 KA---HRPAYS---CLDCSKLANTHNIRISTWKEGVRNILVN 289 A RPA+ +D SK+ + S + L Sbjct: 281 IAFVTDRPAHDFRYAIDASKIERELGWKPS---IALDRGLAE 319 >gi|109121066|ref|XP_001083495.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Macaca mulatta] gi|90083092|dbj|BAE90628.1| unnamed protein product [Macaca fascicularis] Length = 350 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|330718532|ref|ZP_08313132.1| UDP-galactose 4-epimerase [Leuconostoc fallax KCTC 3537] Length = 329 Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 63/339 (18%), Positives = 109/339 (32%), Gaps = 76/339 (22%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVG----------RPD-----IDLLKPKDFAS 44 M LV+G G I + ++D E++ V PD +D+ Sbjct: 1 MAVLVLGGAGYIGSHMVKRLIEDEREVVVVDNLVTGHRQAVHPDAKFYEVDVRDKAALNQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ P F N G + + + + ++ ST Sbjct: 61 VFDQENIEAVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKAHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P P+N YG+SKL E+ +A I A Y Sbjct: 121 YGNPVNIPIKETDPQQPINPYGESKLMMEKIMAWADQADGIKWVALRYFNVAGAAEDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + + +R I + D + TP L +A A I L Sbjct: 181 GEDHAPETHLVPIILQAGLGQRDYIEMFGDDYNTPDGFNVRDYVHVLDLADAHILALDYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG---GPYSKVYRIFTKQYPTKAH 256 E D++ + G + F+ E+A + SK+ Sbjct: 241 KEGGDSNQF-------NLGSAT--GFSVKEMVEAARKATGVDIPSKIGP----------R 281 Query: 257 RP-------AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 RP A S K + V +I+ Sbjct: 282 RPGDPDILVANS----DKARRVLGWAPKY--DNVEDIIK 314 >gi|218191852|gb|EEC74279.1| hypothetical protein OsI_09525 [Oryza sativa Indica Group] Length = 290 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 21/226 (9%) Query: 74 FSINAEGAGAIAKAADSIGI---PCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLA 130 + N ++ S G I++STD V++G+ + E T P+N+YGKSK+A Sbjct: 1 MATNV--PSSLVTWLLSFGNDNTLLIHLSTDQVYEGVK-SFYKEDDETLPVNMYGKSKVA 57 Query: 131 GEEKVASYTNNYVILRTAWVYS------IFGSNFLLSMLRLAKERREISVVCDQFGTPTS 184 E+ + +NY ILR++ +Y + S + M + + +++ D+F P Sbjct: 58 AEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDSVLSQGQQVQFFNDEFRCPVY 117 Query: 185 ALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSK 242 + ++ + + + + + + GGP VS AE + + RG +S Sbjct: 118 VKDMVDVVLSLTKSWLADGKA----VQVLLNVGGPDRVSRLQMAESV---ADVRGYSHSI 170 Query: 243 VYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 + + P +D +KL I+ ++++GVR L Sbjct: 171 IKSVSASSVDRGVASPPDISMDITKLTQMLGIKPISFQDGVRATLA 216 >gi|118586628|ref|ZP_01544068.1| UDP-glucose 4-epimerase [Oenococcus oeni ATCC BAA-1163] gi|118432943|gb|EAV39669.1| UDP-glucose 4-epimerase [Oenococcus oeni ATCC BAA-1163] Length = 334 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV G G I + + + V R + D+ Sbjct: 3 MNVLVTGGAGYIGSHTVDRLLAHGDRVSVVDNLWTGHRQAVPDQAKFYEADVRDKTALKK 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AA T V ++ +P F N G ++ +A ++ S+ Sbjct: 63 IFDENDFDAVVHFAALTQVGESMKKPLFYFDNNTFGVISLLEAMRDHNVKKIVFSSSAAT 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P+N YG +KL E+ +A Y I A Y Sbjct: 123 YGVPKHNPITEDEIQKPINPYGLTKLQMEQIMAWSDQAYGIKGVALRYFNVAGAKADGSI 182 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + ++ ++ ++ + D + TP T+ + Sbjct: 183 GEDHNPETHMIPNILMVAQGKKDKMVIFGDDYNTPDGTNVRDYVHVV 229 >gi|284049269|ref|YP_003399608.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] gi|283953490|gb|ADB48293.1| UDP-glucose 4-epimerase [Acidaminococcus fermentans DSM 20731] Length = 329 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 54/328 (16%), Positives = 100/328 (30%), Gaps = 72/328 (21%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 M LV G G I + + + G D D+ Sbjct: 1 MNVLVTGGAGYIGSHVVEELTANGYTPIVYDNFSTGHVDAVSDKVQLIEGDIHDFNFLKH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + D +++ AA + V ++ P + N G + A G ++ ST V Sbjct: 61 ILGEYEIDGVLHFAASSQVGESMVNPGKYYYNNVAGTLGLLDAMREAGVEQLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SI 153 + R PI E P P N+YG++KL E+ + Y++ Y + A Y +I Sbjct: 121 YGEPDRVPITEDMPLQPTNVYGRTKLMIEKMMEDYSHAYGLRYVALRYFNAAGASLLGNI 180 Query: 154 FGSNFLLSML------RLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 ++ + L +R +S+ + TP +A A + +L Sbjct: 181 GENHRPETHLIPLIIQAALGQRESVSIFGTDYPTPDGTCLRDYIHVKDLASAHVLAMDHL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYI---------FWESAERGGPYSKVYRIFTKQ 250 +++ + G S + + + E A R G +K+ Sbjct: 241 RNGGG---CRTYNLGTENGF-SVREIIDAVKTVTGRNFTVKEEARRAGDPAKLIA----- 291 Query: 251 YPTKAHRPAYSCLDCSKLANTHNIRIST 278 K+ + Sbjct: 292 -------------SSEKIKKELHWEPRH 306 >gi|257420168|ref|ZP_05597162.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|257161996|gb|EEU91956.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + I + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEILDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|116491385|ref|YP_810929.1| UDP-galactose 4-epimerase [Oenococcus oeni PSU-1] gi|290890951|ref|ZP_06554015.1| hypothetical protein AWRIB429_1405 [Oenococcus oeni AWRIB429] gi|116092110|gb|ABJ57264.1| UDP-galactose 4-epimerase [Oenococcus oeni PSU-1] gi|290479350|gb|EFD88010.1| hypothetical protein AWRIB429_1405 [Oenococcus oeni AWRIB429] Length = 332 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV G G I + + + V R + D+ Sbjct: 1 MNVLVTGGAGYIGSHTVDRLLAHGDRVSVVDNLWTGHRQAVPDQAKFYEADVRDKTALKK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AA T V ++ +P F N G ++ +A ++ S+ Sbjct: 61 IFDENDFDAVVHFAALTQVGESMKKPLFYFDNNTFGVISLLEAMRDHNVKKIVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P+N YG +KL E+ +A Y I A Y Sbjct: 121 YGVPKHNPITEDEIQKPINPYGLTKLQMEQIMAWSDQAYGIKGVALRYFNVAGAKADGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + ++ ++ ++ + D + TP T+ + Sbjct: 181 GEDHNPETHMIPNILMVAQGKKDKMVIFGDDYNTPDGTNVRDYVHVV 227 >gi|194016409|ref|ZP_03055023.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] gi|194011882|gb|EDW21450.1| UDP-glucose 4-epimerase [Bacillus pumilus ATCC 7061] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 40/257 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I +++++ + ++ V + DL Sbjct: 1 MTILVCGGAGYIGSHAVAALLAKGERVVVVDNLQTGHKEAVLEGAVLEEGDLRDHAFLRQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + +++ AA + V ++ +P ++ N GA A+ + + + ++ ST Sbjct: 61 VFKRHQIEAVMHFAADSLVGESVTDPLKYYNNNVGGATALLQVMNEFDVKHIVFSSTAAA 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PIDE TNP N YG++KLA E+ + +Y YV+LR V + Sbjct: 121 YGEPMRVPIDETDETNPTNPYGETKLAIEKMLKWSEQAYGIEYVVLRYFNVAGAHTEGLV 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + +R +I + D + T T + + I D Sbjct: 181 GEDHQPETHLVPIILQVALGKRDQIMIYGDDYETEDGTCIRDYIHVM-DLVEAHILAVDR 239 Query: 206 SLRG----IFHMTADGG 218 G +++ G Sbjct: 240 LRAGKGSATYNLGNGTG 256 >gi|114046905|ref|YP_737455.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] gi|113888347|gb|ABI42398.1| dTDP-glucose 4,6-dehydratase [Shewanella sp. MR-7] Length = 339 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 115/340 (33%), Gaps = 63/340 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--------IIRVGRPDI---------------DLL 37 M+ LV G +G I +L + +Q + PD D+ Sbjct: 1 MRILVTGGSGFIGSALVRLLIQATNCHVLNIDKLTYASHPDALIGISNHPRYQFVKADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 F F P+++++ AA T VD++ + P N G + +AA Sbjct: 61 DGARLDILFEQFKPNIVMHLAAETHVDRSIEGPAAFIQNNILGTFTLLEAARRYWTQLDS 120 Query: 93 -----IPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 ++STD VF L+ T E S +P + Y SK + + V ++ Y Sbjct: 121 LQKLQFRFHHVSTDEVFGSLADTGLFSETSAYDPSSPYSASKASTDHLVRAWHRTYGLPI 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHN 198 VI + Y + + M+ A + + + + Q +A+ +A Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVNHALQGKSLPIYGNGQQVRDWLYVDDHVKALYLVATR 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFA--EYIFWESAERGGPYSKVYRIFTKQYPTK-- 254 +++ GG + A + I E + + + + Sbjct: 241 GQLGQ------TYNI---GGCCERTNLAVVQQICLLLEELVPTHPQSLAMKGDGFAALIE 291 Query: 255 --AHRP----AYSCLDCSKLANTHNI-RISTWKEGVRNIL 287 RP Y+ D SK+ + + +++ G+R + Sbjct: 292 HVVDRPGHDIRYAI-DSSKIQHELGWQPLESFESGLRRAV 330 >gi|146296609|ref|YP_001180380.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410185|gb|ABP67189.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 305 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 49/294 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ + ++ V +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIEKNYDVCVVDNLSAGNLKNINPKAKFYKLDIRD--NLED 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++P + S+N G + IY S+ V Sbjct: 59 IFKENKIEYCIHQAAQVSVTKSMEDPILDCSVNILGTLNLLSFCAKYEIKKFIYASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNF- 158 + PIDE P NP++ YG SKL E+ + S+ YVI R + VY F Sbjct: 119 YGEPQYLPIDESHPKNPMSFYGISKLTAEKYIERFAQSHGFEYVIFRYSNVYGPRQDPFG 178 Query: 159 ----LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 + + +++++ D G T + + + ++N ++G F+++ Sbjct: 179 EGGVISIFCERMQNNKDVTIFGD--GNQTRDFIFVEDVAEANYLALQNP---IKGTFNLS 233 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDC 265 + VS + F + G ++T+ RP +S LD Sbjct: 234 TNT-RVSINEL----FGIISGLTGYQKS--AVYTQ------KRPGDIQHSTLDN 274 >gi|160902525|ref|YP_001568106.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] gi|160360169|gb|ABX31783.1| UDP-glucose 4-epimerase [Petrotoga mobilis SJ95] Length = 328 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 88/255 (34%), Gaps = 37/255 (14%) Query: 3 CLVIGNNGQIAQSLSSMCV-QDVEIIRVG--------------RPDIDLLKPKDFASFFL 47 LV G G I L Q+ E++ + DL KD F Sbjct: 2 ILVTGGAGYIGSHLVKRLQDQNKEVVVFDNFEKGHRWAVKDVQVVEGDLRNEKDIDYAFE 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVFDG 106 ++ D + + AA++ V ++ EP F+ N G + K I + ST V+ Sbjct: 62 NYKIDEVYHFAAFSLVGESMTEPNKYFNNNICGTLNLLKNMQKHKCRYIVFSSTAAVYGE 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSM 162 + PI E P NP NIYG+SKL E+ + Y+ +I A Y + + Sbjct: 122 PEKVPITENQPKNPTNIYGQSKLMIEDILNWYSKLDIIRYVALRYFNAAGAYYDGSIGEA 181 Query: 163 LR------------LAKERREISVVCDQFGT--PTSALQIARAIIQI---AHNLIENSDT 205 +R ++ V + + T T+ + I + + Sbjct: 182 HEPETHLIPLVLETALGKRDQLYVYGNDYPTKDGTAVRDYIHVMDLIDAHILAMKWMKEN 241 Query: 206 SLRGIFHMTADGGPV 220 +F++ G Sbjct: 242 EKSDVFNLGNGQGFT 256 >gi|220925443|ref|YP_002500745.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] gi|219950050|gb|ACL60442.1| NAD-dependent epimerase/dehydratase [Methylobacterium nodulans ORS 2060] Length = 340 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/303 (20%), Positives = 105/303 (34%), Gaps = 39/303 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI----------IRVGRPDI--------DLLKPKDF 42 M+ +VIG NG + + LS + + E+ +R ++ D+ P + Sbjct: 1 MRIMVIGGNGFVGRPLSRLLSAEHEVCVLDTLRYGGLRFTGEELSRLKVVLGDITDPDEV 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A+ +F P+ II+ AA + + E +P +A +N G + A G ++ S+ Sbjct: 61 AAAVAAFRPEAIIHLAAIHYIPECEQDPGLAVRVNVAGTVNLLSACP-PGCRFVFASSGA 119 Query: 103 VFDGLSRTPIDEF-SPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSN 157 V+ +R P E S P +IYG +KL GE V V++R V +N Sbjct: 120 VYKADTR-PHTEDGSAVEPSDIYGFTKLHGEHYVRYMAGLRGFPAVVVRLFNVIGPGETN 178 Query: 158 FLLSMLRLAKERREISVVCDQFGTP----TSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 L +A+ + S + TP AR +A L ++ Sbjct: 179 PHLMPEIVAQLKAGYSRIALGNLTPKRDYVHVEDAARGF--MAAALAGEVARGACVTVNL 236 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 S + + S S RI P A D ++ Sbjct: 237 -GTSCAYSVDEIVRKLRQISGLDFAVASDPARIRAVDRPVLAA-------DIGRIRTLFG 288 Query: 274 IRI 276 Sbjct: 289 WEP 291 >gi|41054187|ref|NP_956111.1| dTDP-D-glucose 4,6-dehydratase [Danio rerio] gi|29436945|gb|AAH49462.1| TDP-glucose 4,6-dehydratase [Danio rerio] Length = 274 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 56/231 (24%), Positives = 81/231 (35%), Gaps = 33/231 (14%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDI---------------------DLLK 38 LV G G I L II V D+ Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIY 97 P F + DV+ + AA T V+ + P +N +G + +AA ++ IY Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRAALEASVQRFIY 128 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 ISTD V+ P DE SP P N Y +SK A E V SY + VI R++ VY Sbjct: 129 ISTDEVYGDSVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSSNVYGP 188 Query: 154 --FGSNFLLSMLRLAKERR--EISVVCDQFGTPTSALQIARAIIQIAHNLI 200 + L L ++++ I Q + A + + I Sbjct: 189 RQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGI 239 >gi|149730447|ref|XP_001491790.1| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Equus caballus] Length = 414 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 78 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 137 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 138 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 197 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 198 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 257 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 258 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 312 Query: 209 GIFHMTADGGPVSWADFAEYIFWESA------ERGGPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 313 -IYNIGTNF-EMSVLQLAKELIQLIKETSSESEMENWVDYVNDRPTNDMRYPMK------ 364 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 365 ----SEKIHG-LGWRPKVPWKEGIKKTI 387 >gi|325002124|ref|ZP_08123236.1| NAD-dependent epimerase/dehydratase [Pseudonocardia sp. P1] Length = 315 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 108/311 (34%), Gaps = 46/311 (14%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 M+ LV G G I +L + + E++ V ++D+ FA Sbjct: 1 MRALVTGGAGFIGSTLVDTLLARGDEVLVVDDLSSGKRENLAPGVALTELDIRDTDGFAK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD--Y 102 F+P+ + + AA V + +P S+N G ++ +AA G + + + Sbjct: 61 CAAEFAPEAVYHLAAQIDVRTSMADPVHDASVNVLGTLSVLQAARDTGARGVVVCSTGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEK----VASYTNNYVILRTAWVYSIFGSN- 157 ++ + P E P P + YG SKLA E V ++ ++LR A VY Sbjct: 121 IYGDGAPLPTTEDEPAEPESPYGMSKLAAERYTRFFVRAHGLPALVLRFANVYGPRQHPA 180 Query: 158 ----FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + A+ R +V D Q +ARA A L +F Sbjct: 181 GGAGVVSLFCDRARSGRRPTVFGDGGQTRDFLFVGDVARAATASADRLAAGELAGE--VF 238 Query: 212 HMTADGGPVSWADFAEYIFWESA-ERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSK 267 ++ G + + A I + + G + RP SCLD S+ Sbjct: 239 NV-GTGTESTVTELAATIGRIAGIDEGAFTPEHEP----------ARPGELRRSCLDPSR 287 Query: 268 LANTHNIRIST 278 + T Sbjct: 288 GIAALGLPAPT 298 >gi|259502704|ref|ZP_05745606.1| UDP-glucose 4-epimerase [Lactobacillus antri DSM 16041] gi|259169349|gb|EEW53844.1| UDP-glucose 4-epimerase [Lactobacillus antri DSM 16041] Length = 331 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 97/314 (30%), Gaps = 48/314 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRP----------DIDLLKPKDFAS 44 M LV G G I + V+ E ++ G + D+ + Sbjct: 1 MAILVAGGAGYIGSHMVKNLVEHGEDVVVADNLSTGHRAAINPQAKFYEGDIRDREFLDQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ +P F N G + +A GI I + ST Sbjct: 61 IFENEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHGIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P P+N YG SKL EE +A Y I A Y Sbjct: 121 YGVPEHMPIKETDPQKPINPYGLSKLMMEEMMAWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + +R E+S+ D + TP T+ + +++ Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTPDGTNVRDYVHVMDLTDAHILAIKYL 240 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--AYS-C 262 + G F+ E+A I K P RP S Sbjct: 241 EAGNQSNAFNLGSST---GFSNKQMLEAAREVTG----KPIPAKMAP---RRPGDPDSLV 290 Query: 263 LDCSKLANTHNIRI 276 K + Sbjct: 291 AASDKAREVLGWKP 304 >gi|147677416|ref|YP_001211631.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] gi|146273513|dbj|BAF59262.1| dTDP-D-glucose 4,6-dehydratase [Pelotomaculum thermopropionicum SI] Length = 323 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 105/314 (33%), Gaps = 59/314 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMC--------------------VQDVEIIRVGRPDI---DLL 37 MK LV G G I + ++++E + V R D+ Sbjct: 1 MKLLVTGGAGFIGSNFIHFIHRKHWDWQIVNLDKLTYAGNLKNLEGLDVDRHRFVRGDIA 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 P PD I+N AA + VD++ P N +G + +AA G I Sbjct: 61 DPDVVNE-LAGERPDAIVNFAAESHVDRSISNPSPFIDSNVKGVQVLLEAARRFGIKKFI 119 Query: 97 YISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 +STD V+ L +E SP P + Y SK A + +Y Y ++ R + + Sbjct: 120 QVSTDEVYGSLGPDGAFNENSPLAPNSPYSASKAAADLLCRAYYKTYHLPVIVTRCSNNF 179 Query: 152 SI--FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQI---ARAIIQIAHNLIENSDTS 206 + F+ ++ A R + V D + A + ++ Sbjct: 180 GPRQYPEKFIPVVITCALANRPVPVYGDGL----NVRDWLYVADHCRALEAVILAGRAGE 235 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSC 262 + I G ++ + A I G P S + + A RP Y+ Sbjct: 236 VYNI----GGGRELTNLELAGEILRL---LGKPASLIRFV--------ADRPGHDRRYAV 280 Query: 263 LDCSKLANTHNIRI 276 D SK+ R Sbjct: 281 -DSSKIRRELGWRP 293 >gi|270291175|ref|ZP_06197398.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] gi|270280571|gb|EFA26406.1| UDP-glucose 4-epimerase [Pediococcus acidilactici 7_4] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I + Q E++ V R + D+ Sbjct: 1 MSILVVGGAGYIGSHMVKRLIEQGQEVVVVDNLSTGHRKAVDKKARFYEGDIRNHVFLKG 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +++ AA++ V ++ ++P F N G A+ + I+ ST Sbjct: 61 VFDRENIDTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMRDHDVKRIIFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + ++PI+E P+N YG+SKL E+ + Y I A Y + + Sbjct: 121 YGVPEKSPIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFVALRYFNVAGAYPDGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI 192 A +R ++ + D + TP T+ + Sbjct: 181 GEDHGPETHLTPIILQVAAGQRDQLKIFGDDYNTPDGTNVRDYVHVL 227 >gi|168333305|ref|ZP_02691589.1| UDP-glucose 4-epimerase [Epulopiscium sp. 'N.t. morphotype B'] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 111/314 (35%), Gaps = 48/314 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 MK LV+G G I ++ ++ + ++ V +D+ Sbjct: 1 MKILVVGGAGYIGSHAVRNLLREGFDVAVVDSLQTGFRASVPEGVPFYQVDIRDTAALEE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F D +++ AA + V ++ ++P +S N GA ++ A G+ I + ST Sbjct: 61 VFEKEQVDGVMHFAANSLVGESMEKPLKYYSNNVGGAESLLSAMIKFGVKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYS------- 152 + + PI E +PT P N YG++KLA E+ + ++ NYV LR V Sbjct: 121 YGDVKIMPITEETPTAPTNTYGETKLAIEKMLKWTSVAHDLNYVCLRYFNVAGADAEGGI 180 Query: 153 --IFGSNFLLSMLRLA---KERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDT 205 L + L +R I++ D + T T IA +++ Sbjct: 181 GEAHNPETHLIPIILQVPRNQREYITIFGDDYDTADGTCVRDYIYITDLIAAHILAMKYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G IF++ + G E I G P VY +A PA Sbjct: 241 MAGGENNIFNLGSSTG----YSVNEMIEAAREVTGHPIPLVYG------ERRAGDPASLI 290 Query: 263 LDCSKLANTHNIRI 276 +K Sbjct: 291 ASSAKAKEILGWEP 304 >gi|206900269|ref|YP_002251066.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] gi|206739372|gb|ACI18430.1| UDP-glucose 4-epimerase [Dictyoglomus thermophilum H-6-12] Length = 329 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 100/315 (31%), Gaps = 55/315 (17%) Query: 3 CLVIGNNGQIAQSLS-SMCVQDVEIIRVG--------------RPDIDLLKPKDFASFFL 47 LV G G I + + + +++ + ++DL + F Sbjct: 4 ILVTGGAGYIGSHVVKELLKKGYKVVVLDNLQKGHKKAVLTPYFENVDLKEKNLLKGVFE 63 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + D I++ AA + V ++ EP + N G + + I I+ ST V+ Sbjct: 64 KYEIDAIMHFAALSTVGESMREPFKYYENNILGGLNLLELMKDHNIKYFIFSSTAAVYGE 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSM 162 PI E P NP N+YG SKL EE + Y Y I + Y L Sbjct: 124 PQVIPIPEDHPKNPTNVYGSSKLMFEEILNWYDRIYGIKYVSLRYFNAAGADPEGELGED 183 Query: 163 LR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLR 208 R +R + + + TP T ++ +A I + Sbjct: 184 HRPETHLIPIVLKTALGQREYVEIYGTDYPTPDGTCIRDYIH-VVDLAEAHILALEALFD 242 Query: 209 G----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL 263 G IF++ + G + + + G V RP + L Sbjct: 243 GMSSEIFNLGNERGYS-----VREVISIAEKVVGQKIPVKE--------GQRRPGDPAVL 289 Query: 264 --DCSKLANTHNIRI 276 +K+ + Sbjct: 290 IASSNKIKKNLKWKP 304 >gi|209965823|ref|YP_002298738.1| UDP-glucose 4-epimerase [Rhodospirillum centenum SW] gi|209959289|gb|ACI99925.1| UDP-glucose 4-epimerase [Rhodospirillum centenum SW] Length = 330 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 105/316 (33%), Gaps = 50/316 (15%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI--------DLLKPKDFAS 44 M+ LV G G + + + R + DL Sbjct: 1 MRTVLVTGGAGYVGSHTCKLLAASGYRPVVYDNLSRGQRAAVRWGPLVVGDLTDRARLDE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + P +I+ AA T V ++ ++P + +N G+ + +AA G ++ ST V Sbjct: 61 AFAEWRPSAVIHFAALTYVGESVEKPALYHHVNVGGSRTLVEAATDAGVDRLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + RTPI E P P+N YG++KL EE +A+ + A Y Sbjct: 121 YGTPQRTPIAEDHPLRPINPYGETKLRVEEMLAAAEAASGLRSVALRYFNAAGADPEGET 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENS 203 L++ + ERRE V + TP T+ + Q +E+ Sbjct: 181 GEDHEPETHAIPLAIQAVLGERREFRVFGRDYPTPDGTAVRDYVHVMDLAQAHLLALEHL 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 + G G S A+ + + + + P +A P L Sbjct: 241 ERGGAGTQVNLGTGSGTSVAELLDAVARAAGR---------PVPAATAPRRAGDPP--VL 289 Query: 264 --DCSKLANTHNIRIS 277 D + + R Sbjct: 290 VADGRRAHDLLGWRPR 305 >gi|170722089|ref|YP_001749777.1| UDP-glucose 4-epimerase [Pseudomonas putida W619] gi|169760092|gb|ACA73408.1| UDP-glucose 4-epimerase [Pseudomonas putida W619] Length = 320 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 52/327 (15%), Positives = 101/327 (30%), Gaps = 56/327 (17%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG---------RPDIDLLKPKDFASFFLSFS 50 MK LV+G +G I + + +++ ++D+ + F Sbjct: 1 MKYLVVGGSGYIGSHMVKHLLAAGHDVVVADTVATGPDIEWVELDIADAHALDALFDDCH 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLSR 109 D + + A++ V ++ +P + N + A GI ++ ST V+ Sbjct: 61 FDAVFHFASFIQVAESVTDPCKYYQNNVAATLNLLDAMVRAGIRHLVFSSTAAVYGDPQY 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSMLR- 164 PI+E P P+N YG+SK E+ + + Y + Y L Sbjct: 121 IPINEQHPKAPINPYGRSKWMVEQILQDFDRAYGLRSVCLRYFNAAGADPEGSLGECHEP 180 Query: 165 -----------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIENSDT 205 + R I+V + TP +A A L+ + Sbjct: 181 ETHLIPLILQAASGRREAITVFGHDYDTPDGSCIRDYVHVADLASAHALAVDYLMAGGAS 240 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PAYSC 262 + F++ G + + + G V A R PA Sbjct: 241 TA---FNLGNGLGFS-----VQEVIDTARVVTGQPINVIE--------AARRDGDPARLV 284 Query: 263 LDCSKLANTHNIRISTWKEGVRNILVN 289 D ++ + + + I+ + Sbjct: 285 ADAARARGVLGWQPRF--DSLEQIVRH 309 >gi|54025750|ref|YP_119992.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] gi|54017258|dbj|BAD58628.1| putative UDP-galactose 4-epimerase [Nocardia farcinica IFM 10152] Length = 326 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 113/329 (34%), Gaps = 59/329 (17%) Query: 1 MKCLVIGNNGQIAQ--SLSSMCVQDVEIIRVGRPDIDLL----------------KPKDF 42 MK LV G G + +L + Q E++ V DL + Sbjct: 1 MKLLVTGGAGYVGGVCALV-LLEQGHEVVVVD----DLTTGNADGVPAGARFVEGDVAEV 55 Query: 43 A-SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYIST 100 A + + + D +++ AA + V ++ + PE + N + +A G ++ ST Sbjct: 56 APALLRAETFDGVLHFAAQSLVGESVERPEKYWHGNVVKTLELLEAMRHTGTGRLVFSST 115 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------S 152 V+ + PI E +PT P N YG +KLA + + SY + + T+ Y Sbjct: 116 AAVYGEPEQVPITEDAPTRPTNPYGATKLAIDHAITSYAIAHGLAATSLRYFNVAGAYGG 175 Query: 153 IFGSNFLLSMLR------LAKERREISVVCDQFGTP--TSALQ--IARAIIQIAHNLIEN 202 + + + + L R ISV + TP T+ R + + + Sbjct: 176 LGENRVVETHLIPLVLQVALGHRESISVYGTDWPTPDGTAIRDYIHIRDLADAHLLALTS 235 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 ++ I+++ + G + G I + P +A PA Sbjct: 236 AEPGSHRIYNLGSGTGFS-----VREVISACERVTGL-----PIAAQDAPRRAGDPA--V 283 Query: 263 L--DCSKLANTHNIRISTWKEGVRNILVN 289 L + R + I+ + Sbjct: 284 LIASSERAVAELGWRPQH--TALDEIVAD 310 >gi|327400445|ref|YP_004341284.1| dTDP-glucose 4,6-dehydratase [Archaeoglobus veneficus SNP6] gi|327315953|gb|AEA46569.1| dTDP-glucose 4,6-dehydratase [Archaeoglobus veneficus SNP6] Length = 335 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 62/322 (19%), Positives = 108/322 (33%), Gaps = 52/322 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGR----------PDI-----------DL 36 MK LV G G I + + DVE+I V D+ D+ Sbjct: 3 MKLLVTGGLGFIGSNFIRYILSNYSDVEVINVDALKYGSNPNNLKDVENDDRYTFVKGDI 62 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--P 94 ++ + I+N AA T VD++ P N G I +A Sbjct: 63 SDYDLISNLIKNVY--AIVNFAAETHVDRSISNPYSFLQSNVVGVFTILEAMRKCNPNAK 120 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 ++ISTD V+ + + E P + Y SK A + V SY Y +I R Sbjct: 121 LVHISTDEVYGDILQGSFKEDDTLRPSSPYSASKAAADMFVLSYARTYGLHAMITRCTNN 180 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 Y + F ++ R +++ +GT + + I Sbjct: 181 YGAY--QFPEKLIPKTIIRAAMNMKIPIYGTGKNVRDWIYVLDHCEAINTVMQKGKKGEI 238 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSCLDCS 266 +++++ + E + + G + + RP YS LD S Sbjct: 239 YNISSGEEKTNL----EVVTRILSIMGKDEDLIEFVED--------RPGHDIRYS-LDSS 285 Query: 267 KLANTHNIRIST-WKEGVRNIL 287 K+ N + ++EG++ + Sbjct: 286 KIRNELGWKPKHSFEEGIKETV 307 >gi|218288132|ref|ZP_03492431.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218241491|gb|EED08664.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 103/323 (31%), Gaps = 52/323 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV------EIIRVGRP------------------DIDL 36 MK L+ G G I + Q + + D+ Sbjct: 1 MKLLITGGAGFIGSNFVRYMRQTHPEDAVVNVDALTYAGNLSNLKDIDEGEHYTFVKADI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPC 95 DVI+N AA + VD++ +P N G + AA G Sbjct: 61 TDVAAMDDIVAE-GFDVIVNFAAESHVDRSILDPGAFVRTNVMGTQVLLDAARRHGVKKF 119 Query: 96 IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 I +STD V+ G P E +P P + Y SK + V +Y Y I R + Sbjct: 120 IQVSTDEVYGTLGPDDAPFTETTPLRPNSPYSASKAGADLLVRAYHETYGMHVNITRCSN 179 Query: 150 VYSIF--GSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDT 205 Y + + M+ A E + + V D Q I + + Sbjct: 180 NYGPYQFPEKLIPLMIANALEDKPLPVYGDGLQIRDWLHVWDHCAGIDHVIRHGRSGE-- 237 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 ++++ + + + + G P + + + + P R Y+ D Sbjct: 238 ----VYNIGGNNERTNL----DIVLTILRYLGKPEALIRHV--EDRPGHDRR--YAI-DA 284 Query: 266 SKLANTHNIRIST-WKEGVRNIL 287 +K+ + +++G+R + Sbjct: 285 TKIRTELGWQPKYAFEDGIRETI 307 >gi|220930598|ref|YP_002507507.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] gi|220000926|gb|ACL77527.1| UDP-glucose 4-epimerase [Clostridium cellulolyticum H10] Length = 328 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 78/225 (34%), Gaps = 34/225 (15%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPD--------------IDLLKPKDFASF 45 M LV G G I ++ + E+I + + DL + Sbjct: 1 MAVLVTGGAGYIGSHTVAELLDAKEEVIVLDNLEKGHREAVLGGKFIQADLRNIDEIRKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 + +I+ AAY V ++ P ++ N + + A G ++ ST + Sbjct: 61 LKENDIEAVIHFAAYIEVGESVINPLKYYNNNVIASLNLLTAMQEAGVNKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIF------ 154 + PI E T P+N YG++KL E+ + + Y I Y Sbjct: 121 GIPEQIPIKESDRTAPINPYGETKLTVEKMLKWADDAYGIKYAVLRYFNACGAHISGKIG 180 Query: 155 -----GSNFLLSMLRLAK-ERREISVVCDQFGT--PTSALQIARA 191 S+ + +L++A+ +R EI + + T T Sbjct: 181 EAHSPESHLIPIILQVAQGKRDEIKIFGSDYNTKDGTCVRDYIHV 225 >gi|104781549|ref|YP_608047.1| UDP-glucose 4-epimerase [Pseudomonas entomophila L48] gi|95110536|emb|CAK15244.1| UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase) [Pseudomonas entomophila L48] Length = 320 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 100/325 (30%), Gaps = 52/325 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEII----RVGRP-----DIDLLKPKDFASFFLSFS 50 M LV+G G I + + + +++ RP +D+ + + Sbjct: 1 MNFLVVGGAGYIGSHMVKHLLWANHQVVVADTAPTRPGIHWVQLDIANVHALDTLLAEYR 60 Query: 51 PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLSR 109 D + + A+Y V ++ +P + N + +A G ++ ST V+ Sbjct: 61 FDAVFHFASYIQVGESVADPGKYYQNNVAATLTLLQAMVRAGIDKLVFSSTAAVYGDPVA 120 Query: 110 TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSML-- 163 TPIDE P P+N YG+SK E+ +A + Y + Y L Sbjct: 121 TPIDEEHPKAPINPYGRSKWMVEQLLADFDRAYGLRSVCLRYFNAAGADPEGQLGECHDP 180 Query: 164 ----------RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 A R I+V + TP R + +A ++ + Sbjct: 181 ETHLIPLILQAAAGRRPAITVYGRDYDTP--DGTCIRDYVHVADLASAHALAVDYLV--- 235 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKV---------YRIFTKQYPTKAHRPAYSCLD 264 GG A F +G +V I P + P D Sbjct: 236 --AGG-------ASTAFNLGNGQGFSVQQVIDAARHVTGRPIDISDAPRRPGDPPRLVAD 286 Query: 265 CSKLANTHNIRISTWKEGVRNILVN 289 K + + I+ + Sbjct: 287 AGKARQVLGWTPQF--DSLEQIVAH 309 >gi|116327931|ref|YP_797651.1| sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330813|ref|YP_800531.1| sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|4234786|gb|AAD12954.1| unknown [Leptospira borgpetersenii] gi|116120675|gb|ABJ78718.1| Sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124502|gb|ABJ75773.1| Sugar oxidoreductase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 298 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 119/315 (37%), Gaps = 50/315 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE------------IIRVGRPD-------IDLLKPKDF 42 K LV+G +G + ++ + ++ E + + + +D+L + Sbjct: 6 KILVLGVSGMLGNAVFRVLSENAEFEVQGTIRSIEYLRFFTKAESERITSNMDVLNEDEL 65 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F + PD+++N K +P IN+ ++ IG I ISTD Sbjct: 66 LRLFSNIKPDIVVNCVGIIKQQKLSKDPITVLPINSLLPHRLSNLCKLIGARLILISTDC 125 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF+G E + ++YG+SK GE + S+ +RT+ + SN+ L Sbjct: 126 VFNGQKGN-YTETDTPDAEDLYGRSKEIGEIREESHV---FTVRTSIIGHELNSNYSLVD 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L++ E+ F + + +IA I + + L G++H+++D P+S Sbjct: 182 WFLSQNG-EVKGYKKAFFSGLPSCEIAEIIKTVII-----PNPKLYGLYHVSSD--PISK 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 D E G +K+ +++ LD +K + + WK Sbjct: 234 FDL----LSLVGEVYGKNNKILE--SEEVIV------DRSLDSTKFRKETSYKPLPWKSL 281 Query: 283 V-------RNILVNI 290 + L NI Sbjct: 282 IFLMKKYKEQYLDNI 296 >gi|7657641|ref|NP_055120.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|30173226|sp|O95455|TGDS_HUMAN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|5737699|gb|AAD50061.1|AF048686_1 dTDP-glucose 4,6-dehydratase like protein [Homo sapiens] gi|4128133|emb|CAA06840.1| dTDP-D-glucose 4,6-dehydratase [Homo sapiens] gi|21708081|gb|AAH33675.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|47118017|gb|AAT11156.1| growth-inhibiting protein 21 [Homo sapiens] gi|55957296|emb|CAI12084.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|55959285|emb|CAI12411.1| TDP-glucose 4,6-dehydratase [Homo sapiens] gi|119629345|gb|EAX08940.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|119629346|gb|EAX08941.1| TDP-glucose 4,6-dehydratase, isoform CRA_a [Homo sapiens] gi|189053809|dbj|BAG36061.1| unnamed protein product [Homo sapiens] gi|325464213|gb|ADZ15877.1| TDP-glucose 4,6-dehydratase [synthetic construct] Length = 350 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|296188834|ref|XP_002742523.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase [Callithrix jacchus] Length = 350 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMVVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERG------GPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVIQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKILG-LGWRPKVPWKEGIKKTI 328 >gi|21225473|ref|NP_631252.1| polysaccharide biosynthesis protein [Streptomyces coelicolor A3(2)] gi|9716233|emb|CAC01594.1| putative polysaccharide biosynthesis protein [Streptomyces coelicolor A3(2)] Length = 271 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 94/255 (36%), Gaps = 34/255 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRV-----------GRPDIDLLKPKDFASFFLS 48 M LV+G +G + L + ++DL S Sbjct: 1 MTVLVVGGSGFLGTELVRQASAAGHRVAATFATRPCDGPEATWHEVDLRDGARVEEVVAS 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLS 108 +P V+IN ++ +A +++ AEG+ +A A +++S+D VF G S Sbjct: 61 LAPCVVINASSGSA----------DWAVTAEGSVRLAMTAVKYDCRLVHVSSDAVFSG-S 109 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKE 168 R DE +P+ YG +K A E + VI RT+ + S + + LA Sbjct: 110 RVHYDESCLPDPVTPYGAAKAAAETGIRLLAPAAVIARTSLIIGGIQSEHVRLVHDLATG 169 Query: 169 RREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY 228 R ++ D P +A A L+E + T G+ H+ VS Sbjct: 170 SRTGALFTDDVRCPVHVEDLAAA-------LLELAFTGACGVHHLAGKD-AVSRHGLGVL 221 Query: 229 IFWESAERGGPYSKV 243 I + G S++ Sbjct: 222 I---AQRDGLDASRL 233 >gi|86151999|ref|ZP_01070212.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] gi|56783475|emb|CAI38728.1| putative sugar epimerase [Campylobacter jejuni] gi|85841107|gb|EAQ58356.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] Length = 324 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 104/312 (33%), Gaps = 47/312 (15%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + D I + R DLL A Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNDYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLA 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 SVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRYISLRYFNAAGASKDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G ++ G S + I + G + ++ A Y+ Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEVVSGKKCPINYAPRRE-GDPAR--LYA-- 290 Query: 264 DCSKLANTHNIR 275 D K + Sbjct: 291 DNKKAKEILSWE 302 >gi|254463608|ref|ZP_05077023.1| UDP-glucose 4-epimerase [Rhodobacterales bacterium HTCC2083] gi|206676042|gb|EDZ40530.1| UDP-glucose 4-epimerase [Rhodobacteraceae bacterium HTCC2083] Length = 332 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 90/249 (36%), Gaps = 44/249 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG-------------------RPDI---DLL 37 M+ V G G I + + +++ + RP I D+ Sbjct: 1 MRIAVTGGAGYIGSHTCTLLLAAGHDVLIIDNFNNSKSDVLDRIEKVAGVRPRINQTDIT 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 + ++ F + PD +++ A AV +A + P + +N G+ ++ +A +++G + Sbjct: 61 QADALSAVFSDYRPDAVLHFAGLKAVGEAVENPLEYYRVNVGGSVSLFQAMENVGCNKIV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVY 151 + S+ V+ + PI E P P N YG+SK E+ + + V LR + Sbjct: 121 FSSSATVYGDPDQVPIVENHPLRPTNPYGQSKRYVEKILEDWGQANSNLAAVNLRYFNPF 180 Query: 152 SIFGSNFLLSMLR-------------LAKERREISVVCDQFGTP--TSALQIARAIIQIA 196 + L + + E+ V D + TP T + A Sbjct: 181 GAHPTALLGENPQGIPNNLMPYVAQVATGQAAELLVFGDDYDTPDGTGVRDYIHVMDLAA 240 Query: 197 HNLIENSDT 205 +L T Sbjct: 241 AHLKALDLT 249 >gi|304385459|ref|ZP_07367804.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] gi|304328666|gb|EFL95887.1| UDP-glucose 4-epimerase [Pediococcus acidilactici DSM 20284] Length = 335 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I + Q E++ V R + D+ Sbjct: 6 MSILVVGGAGYIGSHMVKRLIEQGQEVVVVDNLSTGHRKAVDEKARFYEGDIRNHVFLKG 65 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +++ AA++ V ++ ++P F N G A+ + I+ ST Sbjct: 66 VFDRENIDTVVHFAAFSIVPESMEKPLKYFDNNTAGMVALLEEMRDHDVKRIIFSSTAAT 125 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + ++PI+E P+N YG+SKL E+ + Y I A Y + + Sbjct: 126 YGVPEKSPIEENDRQAPINPYGESKLMMEKIIRWADQAYGIKFVALRYFNVAGAYPDGSI 185 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI 192 A +R ++ + D + TP T+ + Sbjct: 186 GEDHGPETHLTPIILQVSAGQRDQLKIFGDDYNTPDGTNVRDYVHVL 232 >gi|221632263|ref|YP_002521484.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] gi|221157013|gb|ACM06140.1| dTDP-glucose 4,6-dehydratase [Thermomicrobium roseum DSM 5159] Length = 344 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 103/323 (31%), Gaps = 57/323 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGRP---------------------DIDLLK 38 + L+ G G I + + ++ + + + D+ Sbjct: 8 RILITGGAGFIGSHFVRLALAAGIPSVVVLDKLTYAGSLLNLEEVLDDPRVRFLEGDIAD 67 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIY 97 P A D ++N AA T VD++ EP N G + + A +G+ ++ Sbjct: 68 PAAVAEAMAGC--DAVVNFAAETHVDRSLLEPAAFIRTNVWGTMVLLEQALRLGVGRFLH 125 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 +STD V+ + + E P P N Y SK A E V +Y +Y ++ R Y Sbjct: 126 VSTDEVYGEVLSGSVSEDEPLRPRNPYAASKAAAEHFVFAYWTSYGLPVLVTRGCNTYGP 185 Query: 154 FGSN--FLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLRG 209 + F+ + R I + D RAI + ++ Sbjct: 186 YQHPEKFIPLAITNLLTGRPIPLYGDGLHERDWLYVEDHCRAIWTVLVRGEPGQAYNIGA 245 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSCLDC 265 H A + G S + + A RP Y+ D Sbjct: 246 GQHRPNIA-------VARALVRL---LGADPSAIVHV--------ADRPGHDRRYAV-DW 286 Query: 266 SKLANTHNIRISTWKEGVRNILV 288 S+L + +++G+ + Sbjct: 287 SRLRALGWRPMVDFEDGLARTVA 309 >gi|121533464|ref|ZP_01665292.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] gi|121308023|gb|EAX48937.1| UDP-glucose 4-epimerase [Thermosinus carboxydivorans Nor1] Length = 331 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 102/316 (32%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDI---------DLLKPKDFAS 44 MK LV G G I V+ + V R + DL Sbjct: 1 MKLLVTGGAGYIGSHTVHELVRAGHTVTVFDNLSKGHRAAVPAGVPLIVGDLRDQDLLTK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 + +++ AA + V ++ +P + N A+ A G+ ++ ST V Sbjct: 61 TLREHQIEGVVHFAADSLVGESMQQPAKYYHNNVVATLALLDAMREGGVGKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E PT P N+YG++KL E +A + Y + + Y Sbjct: 121 YGEPAEWPITEDMPTRPTNVYGRTKLVIEGMLADFAMAYGLRFVSLRYFNAAGALEGGAI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + L + +R + + + TP T +++ + Sbjct: 181 GEDHTPETHLVPLILKTALGQRPAVEIYGTDYPTPDGTCIRDYIHVTDLAVAHVLASEHL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + G I+++ ++ G + + G V Q P +A PA Sbjct: 241 AAGGESKIYNLGSETGFS-----VREVIERAKAITGVDFPVR-----QAPRRAGDPA--V 288 Query: 263 L--DCSKLANTHNIRI 276 L +++ + Sbjct: 289 LVASSARIRRELGWQP 304 >gi|297539427|ref|YP_003675196.1| UDP-glucose 4-epimerase [Methylotenera sp. 301] gi|297258774|gb|ADI30619.1| UDP-glucose 4-epimerase [Methylotenera sp. 301] Length = 321 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 101/313 (32%), Gaps = 47/313 (15%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RP--------DIDLLKPKDFASF 45 MK LV+G G I + + + +++ R + DL Sbjct: 1 MKILVVGGAGYIGSHMVKMLLDEGHKVVTFDNLSSGFRDAVLGGDFVEGDLANTAMLDDV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + P+ +++ A+Y V ++ P + N + I+ ST VF Sbjct: 61 FTKYKPEAVMHFASYIQVGESVQHPAKYYFNNFTNTLNLLNTMVKHQVNSFIFSSTAAVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------SIFGS 156 PIDE P PLN YG+SKL E+ +A Y + Y + Y Sbjct: 121 GEPEYVPIDEAHPKAPLNPYGRSKLMVEQILADYEHAYGLKSVCLRYFNAAGADPGALLG 180 Query: 157 NFLLSMLRL--------AKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 L + R ISV + TP T + + +L+ + Sbjct: 181 ERHEPETHLIPLVLQAISGRRSHISVFGRDYDTPDGTCIRDYIHIVDLCSAHLLALTQLV 240 Query: 207 LRGI---FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G+ F++ G + + + + G V P +A PA Sbjct: 241 KDGVSQRFNLGNGAGFS-----VQEVISVAEQVTGKKVNVI-----DAPRRAGDPARLVA 290 Query: 264 DCSKLANTHNIRI 276 D + NT Sbjct: 291 DATLAKNTLGWSP 303 >gi|114319325|ref|YP_741008.1| UDP-galactose 4-epimerase [Alkalilimnicola ehrlichii MLHE-1] gi|114225719|gb|ABI55518.1| UDP-galactose 4-epimerase [Alkalilimnicola ehrlichii MLHE-1] Length = 331 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 108/323 (33%), Gaps = 63/323 (19%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEII-----------RVGRPDI---DLLKPKDFASF 45 M+ LV G G I + + E + VG + DL A Sbjct: 1 MRVLVTGGAGYIGSHVVRQLLAAGHEPVVYDNLSTGFAWAVGEAPLVRADLADTAQLAET 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 + D +++ AA+T V ++ +P + N + +A G ++ ST V+ Sbjct: 61 LARHAFDAVLHFAAHTVVPESLSDPLRYYGNNTRNTWQLLQACHEAGVKRFVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFL- 159 P+ E +P P+N YG SK+ E + YV LR V S L Sbjct: 121 GMPETMPVAEDAPLAPINPYGASKMMSERMLMDLGAASDLRYVCLRYFNVAGAEPSGRLG 180 Query: 160 ------LSMLRLAKE-----RREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 ++++A E R ++V + TP +ARA IQ +L+ Sbjct: 181 QATPQATHLIKVACEAAVGRRDGVTVFGTDYATPDGTCVRDFIHVEDLARAHIQALSHLV 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP-----TKA 255 + D+ + + G + V R+ +P +A Sbjct: 241 DGGDSQ---VLNCGYGRGY--------SVLEVLEA-------VKRLSGADFPVTLGTRRA 282 Query: 256 HRPAYSCLDCSKLANTHNIRIST 278 PA D ++ T + Sbjct: 283 GDPAQVVADNRRILRTLDWSPRY 305 >gi|304314128|ref|YP_003849275.1| dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] gi|302587587|gb|ADL57962.1| predicted dTDP-glucose 4,6-dehydratase [Methanothermobacter marburgensis str. Marburg] Length = 336 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 62/320 (19%), Positives = 114/320 (35%), Gaps = 50/320 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV--EIIRVGR------------PDID---------LLK 38 + LV G G I + +++ EII + + D + Sbjct: 3 RILVTGGAGFIGSNFIRYMLENHSYEIINLDALTYCGNLENLAGVEDDPRYIFVKGSITD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIY 97 + DV++N AA + VD++ ++P I N G + +A+ G I Sbjct: 63 KELVNDLIAES--DVVVNFAAESHVDRSIEDPGIFIRTNVMGTQTLLEASRRQGVERFIQ 120 Query: 98 ISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 ISTD V+ E +P P + Y SK + + +Y Y I R + Y Sbjct: 121 ISTDEVYGSTEEGYFTEETPLAPNSPYSASKASADLIARAYNRTYGLPVNITRCSNNYGP 180 Query: 154 F--GSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLRG 209 + + M+ A E + + V D RAI + H Sbjct: 181 YQFPEKLIPLMITNALEDKPLPVYGDGMNVRDWIHVRDHCRAIDLVLHGGRAGE------ 234 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++++ ++ + + E I E G S + + + P R Y+ D SK+ Sbjct: 235 VYNIGSNSERRNI-EIVELILRE---LGKDESLIRFV--EDRPGHDRR--YAI-DASKIR 285 Query: 270 NTHNIRI-STWKEGVRNILV 288 + + +++EG+R + Sbjct: 286 SELGWKPCYSFEEGIRETIK 305 >gi|300313503|ref|YP_003777595.1| dTDP-4-dehydrorhamnose reductase [Herbaspirillum seropedicae SmR1] gi|300076288|gb|ADJ65687.1| dTDP-4-dehydrorhamnose reductase protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 108/293 (36%), Gaps = 41/293 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-----------IDLLKPKDFASFFL 47 MK LV+G +G I +++ + Q E+ + R IDL F Sbjct: 1 MKVLVLGASGMIGRTMFHVLSQRPGWEVCAIVRAKTFEVGAPVVTGIDLSNQDHMERLFA 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEI-AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 PDV++N A T E I A ++NA +A+ D I++STD VF G Sbjct: 61 QRRPDVVVNCAGLTK-HLPEGNAHIPALTMNALLPHRLAQLCDIADARLIHVSTDCVFSG 119 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA 166 + E + ++YG++K GE N + LRT+ + G+ F L LA Sbjct: 120 DAGN-YKEQDTPDATDVYGRTKALGE----VTAGNALTLRTSTIGHEHGTQFGLLEWFLA 174 Query: 167 KERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFA 226 + + + ++ AR + I D+SL+G++H+ A P+ Sbjct: 175 QT--QCKGFRHAIFSGLPTVEFARVVRDIVI-----PDSSLKGLYHVGAS--PIDKLSLL 225 Query: 227 EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + I +++ L+ K A R W Sbjct: 226 QTIARVYKRDIAITVD------EEFR------IDRSLNADKFAAATGYRAPAW 266 >gi|254295499|ref|YP_003061521.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] gi|254044030|gb|ACT60824.1| dTDP-glucose 4,6-dehydratase [Hirschia baltica ATCC 49814] Length = 347 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 116/336 (34%), Gaps = 63/336 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLL 37 MK LV G G I ++ ++D V ++ + + +D+ Sbjct: 1 MKILVTGGAGFIGSAVCRHLIKDKGVSVVNLDKLTYAANLESLKEIQDNPNYAFEQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 + + S D I++ AA + VD++ D P N G ++ +AA Sbjct: 61 DREAVLAVLKKHSVDAIMHLAAESHVDRSIDGPSAFMETNIIGTYSMLEAARHYWKDTLN 120 Query: 93 ----IPCIYISTDYVFDGL--SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +ISTD VF L + E +P P + Y SK + + V ++ Y Sbjct: 121 SSDKFRFHHISTDEVFGDLPFDDSLFTETTPYAPSSPYSASKASSDHLVRAWERTYGLPV 180 Query: 143 VILRTAWVYSIFGSNFLLSMLRL----AKERREISVV--CDQFGTPTSALQIARAIIQIA 196 V+ + Y F +F ++ L A E + + V D A A+ + Sbjct: 181 VMTNCSNNYGPF--HFPEKLIPLVTLNALEGKTLPVYGKGDNVRDWLYVEDHAVALATVL 238 Query: 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 ++ G T G S D I E P ++ T Sbjct: 239 EKGKLGESYNIGGNCERTNLGVVESICD----ILDERGRIDKPRRELIEFVTD------- 287 Query: 257 RP----AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 RP Y+ D SK+ N S T++EG+ + Sbjct: 288 RPGHDMRYAI-DASKIKNDLGWEPSVTFEEGLTKTI 322 >gi|311266444|ref|XP_003131096.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Sus scrofa] Length = 390 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 110/331 (33%), Gaps = 60/331 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D I+ + + D D+ Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESA------ERGGPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNILVNI 290 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTTTRL 331 >gi|315124875|ref|YP_004066879.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018597|gb|ADT66690.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 324 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 104/312 (33%), Gaps = 47/312 (15%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + D I + R DLL A Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNDYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLA 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 SVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASKDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G ++ G S + I + G + ++ A Y+ Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEVVSGKKCPINYAPRRE-GDPAR--LYA-- 290 Query: 264 DCSKLANTHNIR 275 D K + Sbjct: 291 DNKKAKEILSWE 302 >gi|258591068|emb|CBE67363.1| UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (Galactowaldenase) [NC10 bacterium 'Dutch sediment'] Length = 306 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 116/321 (36%), Gaps = 52/321 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPD----------IDLLKPKDFAS 44 MK LV G G I + ++ + V G+ + +D+ + Sbjct: 1 MKVLVTGGAGFIGSHVVDALAKEGHDVAVVDDLSKGKREQVHPSARFYQVDIRNRQVLEE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPCIYIST-DY 102 F + P+V+ + AA + ++ EP S+N G+ + + A + ++IS+ Sbjct: 61 VFRAERPEVVNHHAAQGNLRRSMTEPSFDASVNIVGSLNLFELALACTVRKFVFISSGGA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN---NYVILRTAWVYSIFGSN-- 157 V+ R P+DE PT P++ YG SK E+ + + +Y ILR A VY Sbjct: 121 VYGEPQRLPVDERHPTCPMSAYGLSKYTVEQYLRLFDGSGLDYTILRYANVYGPRQDPTG 180 Query: 158 -----FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + S LA ER I FG T +A NL+ + G + Sbjct: 181 EAGVVAIFSRQMLAGERPTI------FGDGTKTRDYVYVGDVVAANLLAMTGKGASGRSY 234 Query: 213 MTADGGPVS-WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKL 268 G VS W IF G + + I RP CLD S Sbjct: 235 NIGLGREVSDWQ-----IFELVRSAVG--ATLEPI------LATKRPGEIDRICLDASLA 281 Query: 269 ANTHNIRIS-TWKEGVRNILV 288 + + +EG+ + Sbjct: 282 KTELGWEPAMSLEEGMARTVA 302 >gi|283852851|ref|ZP_06370113.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] gi|283571761|gb|EFC19759.1| UDP-glucose 4-epimerase [Desulfovibrio sp. FW1012B] Length = 337 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 82/248 (33%), Gaps = 42/248 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------------DLLKPKDFASF 45 LV G G I V ++ D+L Sbjct: 4 NILVTGGAGYIGSHTCKALKAAG-FTPVTYDNMVYGHDWAVKWGPLVRGDILSRGSLDEV 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + P +++ AA+ V ++ +PE + N G+ ++ A G ++ ST + Sbjct: 63 FAEYKPAAVLHFAAFAYVGESVTDPEKYYRNNVAGSLSLLSAMRKSGCKHIVFSSTCATY 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R P+ E PT P++ YG +KL E+ + + Y I TA Y Sbjct: 123 GAPERVPLTEDHPTRPMSPYGTTKLMIEQMLKDFEAAYGIGYTALRYFNAAGADPEGLIG 182 Query: 152 SIFGSNFLLSMLRLAK---ERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 L L +A R ++ + + TP +A A I L+ Sbjct: 183 EDHDPETHLIPLVIAAGLGRRPQVEIFGTDYPTPDGTAVRDYIHVTDLAEAHILAVQKLL 242 Query: 201 ENSDTSLR 208 + ++ Sbjct: 243 DGGPSATY 250 >gi|150388144|ref|YP_001318193.1| UDP-glucose 4-epimerase [Alkaliphilus metalliredigens QYMF] gi|149948006|gb|ABR46534.1| UDP-glucose 4-epimerase [Alkaliphilus metalliredigens QYMF] Length = 329 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 107/329 (32%), Gaps = 58/329 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV G G I + ++ + VE+I + R + DL K A Sbjct: 1 MAVLVCGGAGYIGSHTVLALLKEKVEVIVLDNLSKGHREALPSEVKLYQGDLRDEKLLAG 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F+ D +I+ AA + V ++ + P + N G+ ++ KA G ++ ST V Sbjct: 61 IFIDNEIDGVIHFAADSLVGESVEAPLKYYENNVYGSLSLLKAMAKHGVKKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E S T P N YG++KLA E + + I Y Sbjct: 121 YGEPREVPIVEESLTLPTNPYGETKLAVERMLKWAQEAHGIEFVVLRYFNAAGAEEEGTI 180 Query: 152 -SIFGSNFLLSMLRL---AKERREISVVCDQFGTPTSALQIARAIIQIAH-------NLI 200 L L L +R +I + + + PT R I + L Sbjct: 181 GEDHSPESHLIPLVLEVALGKREKIYIFGEDY--PTEDGTCVRDYIHVMDLADAHLLALK 238 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 G +++ G + + + G I + P +A PA Sbjct: 239 RLQRGEGSGTYNLGNGKGFS-----VQEVIETARRITG-----KPIPAEMAPRRAGDPA- 287 Query: 261 SCL--DCSKLANTHNIRISTWKEGVRNIL 287 L K + + I+ Sbjct: 288 -VLIASSDKARKELGWTSQY--DSLEKII 313 >gi|222529140|ref|YP_002573022.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] gi|222455987|gb|ACM60249.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor bescii DSM 6725] Length = 305 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 104/309 (33%), Gaps = 57/309 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MTVLVTGGAGFIGSHIVDKLIERGYDVCVVDNLLSGNVCNINPKSKFYQLDIRD--NLEK 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + I+ S+ V Sbjct: 59 VFEENKIEYCIHQAAQVSVAKSMEDSYLDCSINILGTVNLLDYCVKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + PIDE P P + YG SKL EE + + Y+I R + VY Sbjct: 119 YGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYIIFRYSNVYGPRQDPC- 177 Query: 160 LSMLRLAKERREISVVCDQ---------FGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 E +S+ C++ +G T + +A ++S+ G Sbjct: 178 -------GEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIY-VEDVAEANCIALESSVSGT 229 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSK 267 F+++ G +S +F + G ++ RP A+SCL + Sbjct: 230 FNLS-TGKNIS----VNELFEILSGLTGYKKS--PVYQS------KRPGDIAHSCLSNNL 276 Query: 268 LANTHNIRI 276 L N Sbjct: 277 LKNVFGFSP 285 >gi|320160985|ref|YP_004174209.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] gi|319994838|dbj|BAJ63609.1| putative UDP-glucose 4-epimerase [Anaerolinea thermophila UNI-1] Length = 308 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 89/249 (35%), Gaps = 37/249 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEII-----RVGRPD----------IDLLKPKDFAS 44 MK LV G G I + ++ +++ GR +D+ P+ Sbjct: 1 MKILVTGGAGFIGSHVVDQFIEAGHDVVVVDNLSTGREKNLNPKARFYRVDIRDPE-LRK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTD-Y 102 F P+V+ + AA V ++ +P +N G+ + + G IYIS+ Sbjct: 60 VFEIEKPEVVDHHAAQMNVRRSVADPLYDADVNVRGSVHLLELCREYGVRKIIYISSGGA 119 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNF 158 V+ P DE P PL YG +K A E + +Y +Y + R VY Sbjct: 120 VYGEPVYLPCDEEHPVRPLCPYGLTKYAFELYLYIYQQNYGIDYTVFRYPNVYGPRQDPL 179 Query: 159 -------LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + + L E I DQ ARA NL+ S R ++ Sbjct: 180 GEAGVIAIFTGQMLRGEPVTIYGTGDQVRDYVHVYDCARA------NLLALESGSGR-VY 232 Query: 212 HMTADGGPV 220 ++ + G Sbjct: 233 NLGSGKGTT 241 >gi|170290459|ref|YP_001737275.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174539|gb|ACB07592.1| dTDP-glucose 4,6-dehydratase [Candidatus Korarchaeum cryptofilum OPF8] Length = 331 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 79/323 (24%), Positives = 124/323 (38%), Gaps = 52/323 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR----------PDI-----------DLL 37 MK L+ G G + +L + D EI+ + D+ D+ Sbjct: 1 MKLLITGGAGFMGSNLVRFIAETTDFEIMVYDKLSYSGRIENIEDLIERKRIRFVRGDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 + S F PD I+N AA T VD++ +EP N G I + IP + Sbjct: 61 DEEMLTSVIEEFRPDAIVNLAAETHVDRSINEPSPFIQTNIFGVYTILEVMRRRDIPLLL 120 Query: 97 YISTDYVFDGLSRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWV 150 ++STD V+ LS I DE S NP + Y SK AG+ + +Y+ Y I R Sbjct: 121 HLSTDEVYGDLSELGIEADESSNLNPSSPYSGSKAAGDLLIKAYSRTYGLKYKIARPCNN 180 Query: 151 YSIFGSN---FLLSMLRLAKERR-EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTS 206 Y + +++RL + + I Q AL ARA++ I + N Sbjct: 181 YGPYQHPEKLIPRTIIRLLQGKPATIYGDGSQERDWIHALDNARALLTILTEGLSNE--- 237 Query: 207 LRGIFHMTADGGPVSWADFA--EYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 I+++ ++A I + G + I+ K P + R Y + Sbjct: 238 ---IYNIC-------RHNYASVRTIVELITKIMGKDPRRDIIYVKGRPGEDLR--Y-AMK 284 Query: 265 CSKLANTHNIRISTWKEGVRNIL 287 C KL N I + G+R+ L Sbjct: 285 CDKLLNLGWRPIYDLETGLRDTL 307 >gi|293553960|ref|ZP_06674564.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] gi|291601886|gb|EFF32134.1| UDP-glucose 4-epimerase [Enterococcus faecium E1039] Length = 329 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 105/316 (33%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I VQ ++ V PD D+ S Sbjct: 1 MTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKVFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + + ++ ST Sbjct: 61 VFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + +PI E +P NP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+ ++V D + TP T + I L Sbjct: 181 GEDHTPETHLVPIILKVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + + F++ + G + + + E G I + P +A P S Sbjct: 241 KEGNESNFFNLGSSKGYS-----VKEMLEAAREVTG-----KEIPAEIAPRRAGDP--SR 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LVASSEKAREILGWKP 304 >gi|258517372|ref|YP_003193594.1| UDP-glucose 4-epimerase [Desulfotomaculum acetoxidans DSM 771] gi|257781077|gb|ACV64971.1| UDP-glucose 4-epimerase [Desulfotomaculum acetoxidans DSM 771] Length = 324 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 98/323 (30%), Gaps = 63/323 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVG--------------RPDIDLLKPKDFASF 45 M LV G G I + + E++ + D+ + Sbjct: 1 MNILVCGGAGYIGSHVVRQLQKKGYEVLVLDNLINGHLSAVDGVPFVKADITDKQALQEV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F S D +++ AA++ V ++ +P + + N G + +A I+ ST V+ Sbjct: 61 FSRNSIDAVMHFAAFSIVGESMSKPGLYYRNNVLGTLNLLEAMRENKVSKLIFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E T P N YG +KLA EE + + + Y + + Y Sbjct: 121 GEPEEIPICEEHRTKPTNPYGATKLAVEEMLNWFNHAYGLNYVSLRYFNAAGADESGDIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + L + EI + + TP +A A L Sbjct: 181 EDHNPETHLIPLVLKTALGVLPEIKIFGTDYPTPDGTCLRDYIHVNDLADA---HIMGLQ 237 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 S IF++ G + I + + G + + T R Sbjct: 238 SLSGGGQSTIFNLGNGNGFS-----VKEIIETARKVTGKP--IQAVETD------RRTGD 284 Query: 258 PAYSCL--DCSKLANTHNIRIST 278 PA L K+ + Sbjct: 285 PA--VLVASSEKIKQELGWQPRY 305 >gi|155372043|ref|NP_001094629.1| dTDP-D-glucose 4,6-dehydratase [Bos taurus] gi|182701397|sp|A6QLW2|TGDS_BOVIN RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|151553768|gb|AAI48107.1| TGDS protein [Bos taurus] gi|296481682|gb|DAA23797.1| TDP-glucose 4,6-dehydratase [Bos taurus] Length = 355 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 112/322 (34%), Gaps = 48/322 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRI-FTKQYPTKAHR-PAYSCLDCS 266 I+++ + +S A+ + E + + PT R P S Sbjct: 254 -IYNIGTNF-EMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKS----E 307 Query: 267 KLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 308 KIHG-LGWRPKVPWKEGIKKTI 328 >gi|84515101|ref|ZP_01002464.1| UDP-glucose 4-epimerase [Loktanella vestfoldensis SKA53] gi|84511260|gb|EAQ07714.1| UDP-glucose 4-epimerase [Loktanella vestfoldensis SKA53] Length = 338 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 100/305 (32%), Gaps = 63/305 (20%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGR-----PDI-----------------DLL 37 M+ LV G G I L + Q E+ + P++ D+ Sbjct: 1 MRVLVTGGAGYIGSHTLIELMAQGHEVCVLDNYTNATPEVLTRVRSLSNGTMMDVRGDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCI 96 F P +++ A AV +++ +P + +N G A+ A D G I Sbjct: 61 DAATLDRVMQDFVPQAVVHFAGLKAVGESQQKPLAYYDVNVGGTLALLHAMDRAGCRRII 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASY-----TNNYVILRTAWVY 151 + S+ V+ P DE PT P ++YG++KL E+ + + + V+LR Sbjct: 121 FSSSATVYGEPDYLPYDEAHPTRPTSVYGRTKLMAEQVLRDWAAADPARSAVLLRYFNPV 180 Query: 152 SIFGSNFLLSMLRLAKE-------------RREISVVCDQFGTP--------TSALQIAR 190 GS + + R ++V D + TP + +AR Sbjct: 181 GAHGSARIGEDPKDIPNNLMPYIAQVAVGLRPALTVFGDDYDTPDGTGLRDYIHVVDLAR 240 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 A + I G S D F + + I T Q Sbjct: 241 AHVAAIDYAARTPGARPFNI----GTGQSYSVIDMVRA-FERACGQ--------PIPTVQ 287 Query: 251 YPTKA 255 P +A Sbjct: 288 APRRA 292 >gi|261406329|ref|YP_003242570.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] gi|261282792|gb|ACX64763.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. Y412MC10] Length = 305 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 97/308 (31%), Gaps = 54/308 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVG----------RPDI-----DLLKPKDFAS 44 MK +V G G I L + V Q E+ + + D+ + + Sbjct: 1 MKMVVTGGAGFIGSHLVNGLVNQGYEVHVIDNLTTGEPGRLHSEAILHVADV-NSQQTTA 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + PDV+ + AA V ++ EP + N G I A G ++ ST V Sbjct: 60 YISVLKPDVVFHLAAQADVQRSIQEPRLDADANVMGTLNILDACRKAGVRKIVFASTAGV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + L R+ + E P NP++ Y SK+AGE+ + Y Y ILR VY + Sbjct: 120 YGDLERSQLTEDDPVNPVSFYALSKVAGEQYIRLYHRFFGLQYTILRYGNVYGPGQTAKG 179 Query: 157 --NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + + D Q + A + + ++ G H Sbjct: 180 EGGVVAVFGERLYQGAPLPIYGDGLQTRDFIYVKDVVDANLASILHGDQSVLHVSTGTDH 239 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH----RPAYSCLDCSKL 268 I + V Y A R +SCL+ + Sbjct: 240 SVN------------TIVDLISRLHPDRIDV------DY-LPAKIGDIR--HSCLNNERT 278 Query: 269 ANTHNIRI 276 Sbjct: 279 RERLRWSP 286 >gi|299783469|gb|ADJ41467.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum CECT 5716] Length = 310 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 108/314 (34%), Gaps = 55/314 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVG----------RPDI-----------DL 36 M LV G G I + ++ + D+ D+ Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + + DV++N AA + VD++ ++P S N G + A + + Sbjct: 61 RDAATVSEVLXTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAXVRLV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 +STD V+ + DE +P P + Y +K + + + + + VI R+A Y Sbjct: 121 QVSTDEVYGSIXAGRXDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYG 180 Query: 153 I--FGSNFLLSMLRLAKERREISV--VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + ++ A+++R +++ D + +AI + +Z Sbjct: 181 PNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRKGVZGE----- 235 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLD 264 ++++ E + A G P S+V + A R Y+ D Sbjct: 236 -VYNIGGFERRT----VLEVVAXLQALLGFPXSQVVHV--------AERLGHDHRYAV-D 281 Query: 265 CSKLANTHNIRIST 278 +KL R ST Sbjct: 282 DTKLRRALGWRPST 295 >gi|294505715|ref|YP_003569775.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294352121|gb|ADE72444.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 274 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 24/254 (9%) Query: 1 MKCLVIGNNGQIAQSLSSM--CVQDVEIIRVGRPD-------IDLLKPKDFASFFLSFSP 51 MK L++G G ++ + ++ R +D+ K + P Sbjct: 1 MKLLILGGKGMAGHVITRYFMLNSNYDVSYTSRDPKDENGIYLDITNFKRLEETVDAIKP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+IIN + A + P AF IN+ +AK + I+ISTD VF G Sbjct: 61 DIIINCIGVLN-EHASNNPMRAFQINSLLPHQLAKLIERYQGKLIHISTDCVFLGSK-GD 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 E + ++Y +SK GE N ++ +RT+ + + + L K+ Sbjct: 119 YTENDSPDGTSVYAQSKQLGEI----VDNKHLTIRTSIIGPELKEDGIGLFLWFMKQEGI 174 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADG--GPVSWADFAEYI 229 I F + L++A+A+ + N ++ G++H+ + ++ + + + Sbjct: 175 IKGYKKVFWNGVTTLELAKAVEFLIEN-------NVTGLYHLHSKQKLSKLTLLELFKEV 227 Query: 230 FWESAERGGPYSKV 243 F + + P +V Sbjct: 228 FEKDDIKIIPDEEV 241 >gi|91975227|ref|YP_567886.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] gi|91681683|gb|ABE37985.1| dTDP-4-dehydrorhamnose reductase [Rhodopseudomonas palustris BisB5] Length = 290 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 105/304 (34%), Gaps = 44/304 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCV--QDVEIIRVGRPD-----------------IDLLKPKDF 42 + LV+G G + ++ + E R +D+ Sbjct: 8 RVLVLGATGMLGNAVFRFFSGSDEFEAFATARSSTLLDRFAEAVRSKLILGVDVENMDVM 67 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A F + PDV+IN + +P ++ IN+ ++ G I+ISTD Sbjct: 68 ARVFANHRPDVVINCIGVVKQLSSAKDPLVSIPINSMLPHRLSALCALSGARLIHISTDC 127 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF+G R E + ++YG++K GE + + LRT+ + L Sbjct: 128 VFNG-ERGAYREDDIPDANDLYGRTKFLGEVDA----PHAITLRTSIIGRELAGAHSLVD 182 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L++ I + ++AR I L G++H+++D P+ Sbjct: 183 WFLSQSG-PIKGFRRAVFSGLPTCELARVIRDFVL-----PARELHGLYHVSSD--PIDK 234 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEG 282 A R G +K+ ++ L+ + + R +W + Sbjct: 235 YTL----LSLIAARYGSNTKIDP--DDEFS------IDRSLNSDRFTSATGYRSPSWPDL 282 Query: 283 VRNI 286 V ++ Sbjct: 283 VASM 286 >gi|147921179|ref|YP_685010.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] gi|110620406|emb|CAJ35684.1| putative UDP-glucose 4-epimerase [uncultured methanogenic archaeon RC-I] Length = 306 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 95/269 (35%), Gaps = 37/269 (13%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDI------------DLLKPKDFASFFLS 48 + LV G G I + L ++ + E+ + D+ KP Sbjct: 7 RVLVTGAKGFIGRYLVDALLNEGAEVTALSTDGAGPEKEGLRWAGGDITKPVSIEGLCKE 66 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGL 107 D++ + AA + VD + P F NA G + + A G +Y+S+ +V+ Sbjct: 67 V--DIVYHLAAISNVDASIRNPIRTFETNAMGTANVLEEARKAGVKKFVYVSSAHVYGVP 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFLLSM- 162 PIDE P P Y SK+A E V +Y N+ Y ILR ++ L Sbjct: 125 QYLPIDEKHPVVPREAYAASKIAAENIVQAYGNSYGIEYAILRPFNIFGPGQDPSFLIPG 184 Query: 163 -LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 ++ A E I V + PT +++ E GIF++ G Sbjct: 185 VIKQALENGVIKVGNTE---PTRDFLYIEDAVRVMLLAGEKG----TGIFNI-GSGQQTK 236 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQ 250 D + I E I + Q Sbjct: 237 ILDIVQRIRDEIDPA-------IPIVSDQ 258 >gi|320529981|ref|ZP_08031057.1| UDP-glucose 4-epimerase [Selenomonas artemidis F0399] gi|320137778|gb|EFW29684.1| UDP-glucose 4-epimerase [Selenomonas artemidis F0399] Length = 331 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 108/317 (34%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV G G I ++ + + E++ V P D+ Sbjct: 3 MAILVCGGAGYIGSHAVHQLIARGEEVVIVDNLQTGHRGALHPQATFCEGDIRDAAALDR 62 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + +A G ++ ST V Sbjct: 63 IFTERSIEAVLHFAANSLVGESMEQPLLYFNNNVYGMQVLLEAMVRHGVDKIVFSSTAAV 122 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E TNP N YG++KL E+ + + YV LR + Sbjct: 123 YGEPKRVPIREDDETNPTNAYGETKLTMEKMMKWVSRASGVRYVSLRYFNAAGALPDGSI 182 Query: 160 LSMLRL------------AKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + R I+V D + TP T ++ +A + D Sbjct: 183 GEDHKTETHLIPLILQVPTGRRDHITVYGDDYPTPDGTCLRDYIH-VVDLADAHMRALDY 241 Query: 206 SLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 RG IF++ + G F+ +AE+ + I ++ A Sbjct: 242 LRRGGESDIFNLGSGSG------FSVKEMIAAAEKATGKAIAVEIGARRAGDPAQ----- 290 Query: 262 CL--DCSKLANTHNIRI 276 L K + Sbjct: 291 -LIASSEKARTVLGWQP 306 >gi|163758304|ref|ZP_02165392.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] gi|162284593|gb|EDQ34876.1| UDP-glucose 4-epimerase [Hoeflea phototrophica DFL-43] Length = 326 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 57/323 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR-----------------PDIDLLKPKDF 42 MK LV G G I +L + +++ + + D+ K Sbjct: 18 MKALVTGGAGFIGSNLCRLLRSHGHDVVVIDSLLSGYRRNLDFDPDITFMEADIRDAKAV 77 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTD 101 + DV+ + AA ++ D+P + IN G + +AA G+ + S+ Sbjct: 78 EAAVDGC--DVVFHLAAAVGNKRSIDDPRLDADINVMGTVTLMEAARKAGVGRVVVSSSA 135 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVI----LRTAWVYSIFGS- 156 +F L + PI E P +P + YG SKL E+ SY+ Y I LR VY I Sbjct: 136 GIFGELKKLPISEDHPIDPDSPYGASKLFKEKFSLSYSKLYDIGVVALRYFNVYGINQRF 195 Query: 157 ----NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 N + I+V D Q + +A+A N + G Sbjct: 196 DAYGNVIPIFAYKMLRGEPITVFGDGEQTRDFVNVQDVAQA------NYQAGLAEGVSGA 249 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIF-TKQYPTKAHRP---AYSCLDCS 266 F++ + + +V I T +Y RP S D S Sbjct: 250 FNLGSGTRIT------------INKLIEMMQEVSGIKATVEYGPP--RPGDVRDSLADIS 295 Query: 267 KLANTHNIRIS-TWKEGVRNILV 288 + S ++ G+R+ + Sbjct: 296 AARASLGFSPSADFEAGLRDYMA 318 >gi|30173340|sp|Q8VDR7|TGDS_MOUSE RecName: Full=dTDP-D-glucose 4,6-dehydratase gi|18204038|gb|AAH21419.1| TDP-glucose 4,6-dehydratase [Mus musculus] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 50/323 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D I+ + + D D+ Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F D++++ AA T VD + +N G + AA G I Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPERVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS---CLDC 265 I+++ + +S A+ + E + Y + RP + Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESETESWV---DYVS--DRPHNDMRYPMKS 306 Query: 266 SKLANTHNIRIS-TWKEGVRNIL 287 K+ ++ + W+EG++ + Sbjct: 307 EKI-HSLGWKPKVPWEEGIKKTV 328 >gi|312622609|ref|YP_004024222.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] gi|312203076|gb|ADQ46403.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor kronotskyensis 2002] Length = 305 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 105/309 (33%), Gaps = 57/309 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MAILVTGGAGFIGSHIVDKLIERGYDVCVVDNLLSGNVCNINPKSKFYQLDIRD--NLEK 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + I+ S+ V Sbjct: 59 VFEENKIEYCIHQAAQVSVAKSMEDSYLDCSINILGTVNLLDYCVKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + PIDE P P + YG SKL EE + + Y+I R + VY F Sbjct: 119 YGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHKFHFEYIIFRYSNVYGPRQDPF- 177 Query: 160 LSMLRLAKERREISVVCDQ---------FGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 E +S+ C++ +G T + +A ++S+ G Sbjct: 178 -------GEGGVVSIFCERMLGSKDVIIYGDGTQTRDFIY-VEDVAEANCIALESSVSGT 229 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSK 267 F+++ G +S +F + G ++ RP A+SCL + Sbjct: 230 FNLS-TGKNIS----VNELFEILSGLTGYKKS--PVYQS------KRPGDIAHSCLSNNL 276 Query: 268 LANTHNIRI 276 L + Sbjct: 277 LKSVLGFSP 285 >gi|83955937|ref|ZP_00964448.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] gi|83839701|gb|EAP78879.1| dTDP-glucose 4,6-dehydratase [Sulfitobacter sp. NAS-14.1] Length = 345 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 111/331 (33%), Gaps = 56/331 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + Q ++ + D+ Sbjct: 1 MKLLVTGGAGFIGSAVVRLAIAQGHSVVNLDALTYAACLENVASVADSPLYVFEQADICD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 + F + PD +++ AA + VD++ D P N G + +AA + Sbjct: 61 REALDRIFTTHQPDAVMHLAAESHVDRSIDGPGAFIQTNVTGTYTLLEAARAYWQGAGKP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 G +ISTD V+ L T E +P +P + Y SK A + V ++ Y V+ Sbjct: 121 DGFRFHHISTDEVYGSLGPTGQFTEDTPYDPRSPYSASKAASDHLVRAWGETYGLPIVLT 180 Query: 146 RTAWVYSIFG--SNFLLSMLRLAKERREISVVCDQFGTPTS--ALQIARAIIQIAHNLIE 201 + Y + + ++ A I V D A A++ + Sbjct: 181 NCSNNYGPYHFPEKLVPVVILKALAGEPIPVYGDGANVRDWLFVEDHADALLTVLTKGKL 240 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--- 258 ++ G VS + + I + + + T A RP Sbjct: 241 GRSYNIGG-------ENEVSNLEMVKMICALLDDLHPEGAPHADLIT----FVADRPGHD 289 Query: 259 -AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D +++ R S T +EG+ + Sbjct: 290 QRYAI-DPTRIRTELGWRPSVTVEEGLARTV 319 >gi|298247870|ref|ZP_06971675.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] gi|297550529|gb|EFH84395.1| UDP-glucose 4-epimerase [Ktedonobacter racemifer DSM 44963] Length = 325 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 107/326 (32%), Gaps = 52/326 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 MK LV G G I ++ V+ E+ + + +LL + Sbjct: 1 MKFLVTGGAGYIGSVMTKQLVEAGHEVTVLDNFTKGHHQAVLPQVKLVEGELLNAQRLKE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AA + V ++ +PE + N G + A G ++ ST V Sbjct: 61 VFKD-GFDGVLHFAALSLVGESVTQPERYYRNNVVGTLNLLDAMREAGVKRLVFSSTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + TPI E + P N YG SKLA ++ + A++ V LR V G Sbjct: 120 YGAPEETPILETAQPRPTNPYGGSKLAVDQMIGFEAAAHGLAAVSLRYFNVAGASGELGE 179 Query: 160 LSMLR----------LAKERREISVVCDQFGTP--TSALQ--IARAIIQIAHNLIENSDT 205 + A R + + + TP T+ + + + ++ Sbjct: 180 VHNPETHLIPLVLQAAAGSRESVQIYGTDYPTPDGTAIRDYIHVEDLARAHILALTHAQP 239 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL-- 263 I+++ G + + + G I + +A P L Sbjct: 240 GKHEIYNLGNGKGFS-----VREVIETARQVTG-----KPIKAIETDRRAGDPP--VLVA 287 Query: 264 DCSKLANTHNIRISTWKEGVRNILVN 289 K + K + +++ + Sbjct: 288 SSEKAQRDLGWKPQ--KPELASMIAD 311 >gi|257052193|ref|YP_003130026.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] gi|256690956|gb|ACV11293.1| NAD-dependent epimerase/dehydratase [Halorhabdus utahensis DSM 12940] Length = 332 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 94/270 (34%), Gaps = 35/270 (12%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVG--------------RPDIDLLKPKDFASF 45 V G G I + + E+ + +D+ K A Sbjct: 15 IAVTGAAGFIGSRVLDRLQAAHPEWELTAIDNFYLGKVREVGDVTIEHVDVRKRDRLADA 74 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 D++++ AA + VD D ++A+ N G +A G ++ + V Sbjct: 75 LDGS--DIVMHLAAVSGVDDCGDNADLAYETNVVGTHNVAWFCRQTGAALVFPFSMAVLG 132 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-------- 157 PI P +P+N YG++K+ GE+ + +Y + +++GS+ Sbjct: 133 DPQSFPITVEQPRDPMNWYGRTKVLGEQAIQTYADGAFPAHLFLKSNLYGSHEVGDRVVS 192 Query: 158 ---FLLSMLRLAKERREISVVC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI-- 210 + L + ++V Q +ARA ++ A L E G+ Sbjct: 193 KGTVINFFLGRLFDGETLTVYEPGTQARNYIHVKDVARAYVRSAERLEEQLAAGETGVER 252 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPY 240 + + +D P S AE I + E G Sbjct: 253 YEIASDEDP-SVMTVAEQIQEIAGEYGLDA 281 >gi|218290279|ref|ZP_03494425.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] gi|218239634|gb|EED06826.1| dTDP-glucose 4,6-dehydratase [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 107/323 (33%), Gaps = 52/323 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPDI-----------------------DL 36 MK L+ G G I + Q E + V + D+ Sbjct: 1 MKLLITGGAGFIGSNFVRYMRQMHPEDVIVNVDALTYAGNLSNLKDIDEREHYTFVKADI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPC 95 + DVI+N AA + VD++ +P N G + AA G Sbjct: 61 TDASAMDTIVAG-GFDVIVNFAAESHVDRSIMDPGAFVRTNVMGTQVLLDAARRHGVKKF 119 Query: 96 IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 + +STD V+ G P E +P +P + Y SK + V +Y Y I R + Sbjct: 120 VQVSTDEVYGTLGPDDAPFTETTPLHPNSPYSASKAGADLLVRAYHETYGMHVNITRCSN 179 Query: 150 VYSIF--GSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDT 205 Y + + M+ A E + + V D Q I + + Sbjct: 180 NYGPYQFPEKLIPLMITNALEDKPLPVYGDGLQIRDWLHVWDHCAGIDLVIRHGRSGE-- 237 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 ++++ + + D I G P + + + + P R Y+ D Sbjct: 238 ----VYNIGGNNERTN-LDIVRTILR---YLGKPETLIRHV--EDRPGHDRR--YAI-DA 284 Query: 266 SKLANTHNIRIST-WKEGVRNIL 287 +K+ + +++G+R + Sbjct: 285 TKIRTELGWQPKYAFEDGIRETI 307 >gi|148668237|gb|EDL00567.1| TDP-glucose 4,6-dehydratase, isoform CRA_d [Mus musculus] Length = 357 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 50/323 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D I+ + + D D+ Sbjct: 21 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 80 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F D++++ AA T VD + +N G + AA G I Sbjct: 81 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 140 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 141 YVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 200 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 201 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE----- 255 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS---CLDC 265 I+++ + +S A+ + E + Y + RP + Sbjct: 256 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESETESWV---DYVS--DRPHNDMRYPMKS 308 Query: 266 SKLANTHNIRIS-TWKEGVRNIL 287 K+ ++ + W+EG++ + Sbjct: 309 EKI-HSLGWKPKVPWEEGIKKTV 330 >gi|126649888|ref|ZP_01722124.1| Nucleoside-diphosphate-sugar epimerase and GAF domain fusion protein [Bacillus sp. B14905] gi|126593607|gb|EAZ87552.1| Nucleoside-diphosphate-sugar epimerase and GAF domain fusion protein [Bacillus sp. B14905] Length = 308 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 50/320 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-PDID------LLKPKD--FASF 45 M LV G G I ++ ++ ++ + G ++D LL +D Sbjct: 1 MNVLVTGGYGFIGSAVGRRFFEEGASVYIIDNLSTGHLRNVDFEHKSYLLNVEDEVCEHL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F DV+I+ AA T+V ++ EP N G + + + ++ S+ V+ Sbjct: 61 FKETHFDVVIHCAAQTSVQQSLQEPVKDILTNIVGLSQMLFLSSKYKVKHFVFASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN--- 157 P++E P+++YG +K GE + +Y +I R A V+ Sbjct: 121 GNSHYPPLEETDVCEPISMYGLNKSIGETYCEKWQKDYRLPILIYRFANVFGPRQQMQGE 180 Query: 158 --FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + SML+ + E + ++ D Q IA AI H ++ GI+++ Sbjct: 181 AAVIPSMLKSSMEGKPFTIYGDGEQTRDFIYVDDIADAIYAGVHARLQ-------GIYNV 233 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--AYSCLDCSKLANT 271 + + S + P QY A +S L+ KLAN Sbjct: 234 STNEAW-SLHQ----VILLLQHLNHPLEI-------QY-APAREGDIEHSFLNNDKLANA 280 Query: 272 HNIRIS-TWKEGVRNILVNI 290 R ++ EG+ L + Sbjct: 281 IGWRPKISFAEGIERTLNAL 300 >gi|225579052|ref|NP_083854.3| dTDP-D-glucose 4,6-dehydratase [Mus musculus] gi|74178557|dbj|BAE32527.1| unnamed protein product [Mus musculus] Length = 355 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 50/323 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D I+ + + D D+ Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F D++++ AA T VD + +N G + AA G I Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS---CLDC 265 I+++ + +S A+ + E + Y + RP + Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESETESWV---DYVS--DRPHNDMRYPMKS 306 Query: 266 SKLANTHNIRIS-TWKEGVRNIL 287 K+ ++ + W+EG++ + Sbjct: 307 EKI-HSLGWKPKVPWEEGIKKTV 328 >gi|225707656|gb|ACO09674.1| dTDP-D-glucose 4,6-dehydratase [Osmerus mordax] Length = 341 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 107/331 (32%), Gaps = 65/331 (19%) Query: 2 KCLVIGNNGQIAQSLSSMCV---QDVEIIRVGRPDI---------------------DLL 37 LV G +G I V D +I + D D+ Sbjct: 6 NILVTGGSGFIGSHFVCSLVNRHPDWRVINLDNMDYCASARSLERFEERDNYTFIKGDIC 65 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 P+ F + + D++ + AA T V+ + P +N EG + K A D+ + Sbjct: 66 NPRLVNHIFATENIDIVFHLAAKTHVESSFVCPSTYHRVNVEGTRVLLKGAFDAKVAKFV 125 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 YISTD V+ +E SP P N Y +K A E V SY Y ++ R+ VY Sbjct: 126 YISTDEVYGQSLDKAFEETSPRRPTNPYSNTKAAAECLVLSYWEKYRFPVIVTRSNNVYG 185 Query: 153 I--FGSNFLLSMLRLAKERR--EISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 F + + L + + I Q + A+ I I Sbjct: 186 PRQFTEKVIPRFVSLLQNDKKCTIQGTRPQSRHFLFVEDVVEALFTILEKGIVGE----- 240 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT----KAHRPA----- 259 I+++ + DF I + E V + A RP Sbjct: 241 -IYNIGS--------DFEISIIQLAREL---TKMVRNVPDSDLGDWLEFVAERPQVDLRY 288 Query: 260 --YSCLDCSKLANTHNIRISTWKEGVRNILV 288 S KL + +W EG+R + Sbjct: 289 PINS----DKLRHLGWAPAVSWAEGIRTTVK 315 >gi|15807195|ref|NP_295924.1| UDP-glucose 4-epimerase [Deinococcus radiodurans R1] gi|6460005|gb|AAF11751.1|AE002053_6 UDP-glucose 4-epimerase [Deinococcus radiodurans R1] Length = 394 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 54/320 (16%), Positives = 106/320 (33%), Gaps = 59/320 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEI-----IRVGRPDI----------DLLKPKDFAS 44 MK LV+G G I + + E+ + G + DLL + Sbjct: 1 MKLLVVGGAGYIGSHTVRQLRAAGHEVAVFDNLSSGHAEALPGEVELIRGDLLDAASIRA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK-AADSIGIPCIYISTDYV 103 + PD II+ AA V ++ P + N G + + ++ +P ++ ST V Sbjct: 61 ALEAQKPDAIIHFAALIEVGESMRAPGRYYRNNVVGTLNLLQSIVETRKVPLVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E + P ++YG++K E+ + ++ + + T Y + Sbjct: 121 YGTTDAVPIPEDAAMQPESVYGETKRMSEQMIHAFHVAHGLPYTVLRYFNVCGAAPGGDI 180 Query: 160 ------------LSMLRLAKERREISVVCDQFGTP--------TSALQIARA---IIQIA 196 L+ L +R ++ + D + TP +A A ++ Sbjct: 181 GEAHPNKTHLIELACLTALGQREKMMIFGDDYPTPDGTCIRDYVHVQDLADAHVLAVEAL 240 Query: 197 HNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH 256 H ++ T G+ H + + G + + P +A Sbjct: 241 HAGKTDAATYNVGLGHGFSV----------REVLDAVDAVVG-----TPLQRELAPRRAG 285 Query: 257 RPAYSCLDCSKLANTHNIRI 276 P D S++ + Sbjct: 286 DPPRLVADASRIVDQLGFAP 305 >gi|18309268|ref|NP_561202.1| UDP-glucose 4-epimerase [Clostridium perfringens str. 13] gi|168207452|ref|ZP_02633457.1| UDP-glucose 4-epimerase [Clostridium perfringens E str. JGS1987] gi|18143944|dbj|BAB79992.1| UDP-glucose 4-epimerase [Clostridium perfringens str. 13] gi|170661186|gb|EDT13869.1| UDP-glucose 4-epimerase [Clostridium perfringens E str. JGS1987] Length = 328 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 104/315 (33%), Gaps = 51/315 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG-----RPDI---------DLLKPKDFASF 45 M LV G G I + + +++ E++ + D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E P N YG+SKL E+ + Y I TA Y + + Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRYFNAAGAHVNGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTS 206 +R +I + D + T T + + + Sbjct: 181 EDHSPETHLIPLILQVALGKRDKIMMFGDDYDTKDGTCVRDYIHVSDLASAHSLALERLM 240 Query: 207 LRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G I+++ G + + + + G + I + P +A PA L Sbjct: 241 NGGESRIYNLGNGTGFT-----VKEVVEVARKVTG-----HPIPAEVAPRRAGDPA--IL 288 Query: 264 --DCSKLANTHNIRI 276 K N + Sbjct: 289 IASSDKAIEELNWKP 303 >gi|240103010|ref|YP_002959319.1| UDP-glucose 4-epimerase, putative (galE) [Thermococcus gammatolerans EJ3] gi|239910564|gb|ACS33455.1| UDP-glucose 4-epimerase, putative (galE) [Thermococcus gammatolerans EJ3] Length = 310 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 105/319 (32%), Gaps = 52/319 (16%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDF 42 M+ ++ G G I ++ V+D E+I GR + D+ Sbjct: 1 MRNRLVVITGGAGFIGSHIAWELVKDNEVIVIDNLYTGRAENVPPGAKLVKADIRDYDAI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V ++ +P +N G I +A I+ S+ Sbjct: 61 AELIS--HADYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNILRALLEGHGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS-- 156 V+ P+ E PL+ YG +K EE + Y Y V LR V+ S Sbjct: 119 VYGDNPNLPLKETERPRPLSPYGVTKATAEEYLRVYHELYGLPVVALRYFNVFGPRQSAN 178 Query: 157 ---NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + ++ A + + D Q + +A + +A + N Sbjct: 179 QYAGVISIFIKRALAGEPLVIFGDGKQTRDFIYVKDVVKANLLVAESRRANGRVFN---- 234 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 A G S + A I ++ + K RP +S D ++ Sbjct: 235 --VATGRQTSILELAMKI-----------VEITGTTSSIIFDK-PRPGDIRHSLADIGEI 280 Query: 269 ANTHNIRISTWKEGVRNIL 287 + +EG++ + Sbjct: 281 RKLGFEPEFSLEEGLKRTV 299 >gi|260662864|ref|ZP_05863758.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] gi|260552945|gb|EEX25944.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum 28-3-CHN] Length = 310 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 106/314 (33%), Gaps = 55/314 (17%) Query: 1 MKCLVIGNNGQIAQSLSSM---------------------CVQDVEIIRVGRPDI---DL 36 M LV G G I ++ R D+ Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHDPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + + DV++N AA + VD++ ++P S N G + A + + Sbjct: 61 RDAATVSEVLATHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAQVRLV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 +STD V+ + +DE +P P + Y +K + + + + + VI R+A Y Sbjct: 121 QVSTDEVYGSIVAGRVDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYG 180 Query: 153 I--FGSNFLLSMLRLAKERREISV--VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + ++ A+++R +++ D + +AI + +E Sbjct: 181 PNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRKGVEGE----- 235 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLD 264 ++++ E + A G P S+V + A R Y+ D Sbjct: 236 -VYNIGGFERRT----VLEVVASLQALLGFPDSQVVHV--------AERLGHDHRYAV-D 281 Query: 265 CSKLANTHNIRIST 278 +KL + ST Sbjct: 282 DTKLRRALGWQPST 295 >gi|315026928|gb|EFT38860.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2137] Length = 310 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|12847753|dbj|BAB27693.1| unnamed protein product [Mus musculus] gi|148668236|gb|EDL00566.1| TDP-glucose 4,6-dehydratase, isoform CRA_c [Mus musculus] Length = 343 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 110/321 (34%), Gaps = 50/321 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D I+ + + D D+ Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F D++++ AA T VD + +N G + AA G I Sbjct: 79 DSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS---CLDC 265 I+++ + +S A+ + E + Y + RP + Sbjct: 254 -IYNIGTNF-EMSVVQLAKELIQLIKETNSESETESWV---DYVS--DRPHNDMRYPMKS 306 Query: 266 SKLANTHNIRIS-TWKEGVRN 285 K+ ++ + W+EG++ Sbjct: 307 EKI-HSLGWKPKVPWEEGIKK 326 >gi|206889234|ref|YP_002248313.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741172|gb|ACI20229.1| UDP-glucose 4-epimerase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 328 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 101/319 (31%), Gaps = 69/319 (21%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI--------DLLKPKDFASFF 46 K LV G G I + + +++ R + DL + F Sbjct: 6 KILVTGGAGYIGSHVVKALGERGYQVLTYDNLSYGCRDSVLYGDLVVADLADKEKLRRVF 65 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFD 105 F PD +I+ AA V ++ EP + N + +A G+ ++ S+ V+ Sbjct: 66 EEFKPDAVIHFAASIVVPESVREPIKYYRNNFCNTLNLIEACIEQGVKNFLFSSSAAVYG 125 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLS 161 ++P+DE + P+N YG++K E +A + YV LR V S L Sbjct: 126 IPEKSPVDETASLAPINPYGRTKAMVEHLLADLSQAEDFRYVSLRYFNVAGADISGRLGQ 185 Query: 162 ML------------RLAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLIE 201 +R + + + T +A A + LI+ Sbjct: 186 RRPDATHLITLAVKTALGKRPFLEIYGTDYPTRDGTCIRDYIHVDDLAEAHLLALEYLIQ 245 Query: 202 NSDTS--LRGIFHMTADGGP------VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPT 253 N + G H + VS DF + + G P V Sbjct: 246 NGKSDIFNCGYGHGYSVREVVDATKRVSGVDF--KVIETTRREGDPPELVA--------- 294 Query: 254 KAHRPAYSCLDCSKLANTH 272 D K+ NT Sbjct: 295 ----------DNRKIKNTL 303 >gi|301308244|ref|ZP_07214198.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 20_3] gi|300833714|gb|EFK64330.1| capsular polysaccharide biosynthesis protein I [Bacteroides sp. 20_3] Length = 355 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 107/341 (31%), Gaps = 68/341 (19%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV-------------------------EIIRVGRP----D 33 LV G G I +L +D+ EI + R Sbjct: 13 VLVTGAAGFIGSNLVKRLFKDIKNIKVIGIDSITDYYDVNIKYERLKEIEALNRDWEFVH 72 Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 + F V++N AA V + P+ N G + +A Sbjct: 73 ASISDKVAVEKIFTDNKIAVVVNLAAQAGVRYSITNPDAYIESNLIGFYNLLEACRHHEV 132 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAW-- 149 +Y S+ V+ + P NP+++Y +K + E +Y+ Y I T Sbjct: 133 EHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTGLRF 192 Query: 150 --VYSIFGSNFLLSMLR--LAKERREISVVCDQFGTP----TSALQIARAIIQIAHNLIE 201 VY G + ++ + I + +G T I +++I + E Sbjct: 193 FTVYGPAGRPDMAYFGFTNKLRDGKTIQIFN--YGNCKRDFTYVDDIVEGVVRIMQHAPE 250 Query: 202 NSDTSL------RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKA 255 + ++++ + + DF I E R KV + Y +A Sbjct: 251 KQNGEDGLPIPAYKVYNIGNNSPE-NLLDF-VSILQEELIRA----KVLP---QNYDFEA 301 Query: 256 H------RPAY-SCL--DCSKLANTHNIRI-STWKEGVRNI 286 H RP S D + L + ++ ++G+R Sbjct: 302 HKELVPMRPGDVSVTYADTTPLEQDFGFKPSTSLRDGLRAF 342 >gi|302880026|ref|YP_003848590.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] gi|302582815|gb|ADL56826.1| dTDP-4-dehydrorhamnose reductase [Gallionella capsiferriformans ES-2] Length = 284 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 110/306 (35%), Gaps = 46/306 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-----------------IDLLKPKD 41 MK LV+G++G I ++ + + D ++ R + +D+ + Sbjct: 1 MKILVVGSSGMIGSTVLRVLSENNDSDVFGSIRDENCKRFFSESIAARLVAGVDVEQTDH 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 PDV++N A T D+P ++ IN +A +G I++STD Sbjct: 61 LVKLLDQIRPDVVVNCAGLTKHKPEADDPLVSIPINTLMPHRLAGLCKLVGARLIHVSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YGKSK GE + + V LRT+ + S + L Sbjct: 121 CVFSGAKGR-YVEDDFADARDVYGKSKALGEL----HYPHTVTLRTSTIGHELQSQYGLL 175 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 LA+E R F G PT A+ I + +L G++H+ A P+ Sbjct: 176 DWFLAQEGRCKGYSRAIFSGLPTVV--FAQIIRDFVI-----PNLALSGLYHIAAK--PI 226 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 + D I A++ I LD + W Sbjct: 227 NKLDLLGLIADVYAKQIDIIPDDKLI------------LDRSLDAQRFQLATGYIAPEWP 274 Query: 281 EGVRNI 286 E + + Sbjct: 275 ELINTM 280 >gi|315143284|gb|EFT87300.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX2141] Length = 310 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + +I V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVIVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|302873798|ref|YP_003842431.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|307689961|ref|ZP_07632407.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] gi|302576655|gb|ADL50667.1| NAD-dependent epimerase/dehydratase [Clostridium cellulovorans 743B] Length = 317 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 100/323 (30%), Gaps = 60/323 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI---------DLLKPKDFAS 44 MK L+ G G IA ++ V+ D +++ +I D+ + Sbjct: 1 MKILITGGAGFIASHIADRLVELDYDVVIFDNLSSGKVENINPKCKFYKGDITNYEAMKL 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F P+V+I+ AA V + P IN G + + IY S+ V Sbjct: 61 VFDIERPEVVIHHAAQIDVQTSLKNPAFDAQINIIGTINVLECCRETKVRKIIYPSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + P+DE P P++ YG SK + +Y+ Y I R A VY N Sbjct: 121 YGNPKYLPVDENHPVEPISFYGISKHTPCHYIKAYSELYNIKYTIFRYANVYGPRQDNHG 180 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + + D Q +A A + D I Sbjct: 181 EGGVVSIFANRLLRKETCYIYGDGKQTRDFIYVKDVANANVLAL-------DRGDNEIID 233 Query: 213 MTADGGPV--SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 ++++ + I S ++ I +S L K + Sbjct: 234 ISSNKPVTINQLHKVMKEISKCSVAVEYKEARNGDI------------LHSYLSNEKASG 281 Query: 271 THNIRISTWKE------GVRNIL 287 WK+ G++ L Sbjct: 282 CLG-----WKDKHDIKSGLKETL 299 >gi|261409577|ref|YP_003245818.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] gi|261286040|gb|ACX68011.1| dTDP-glucose 4,6-dehydratase [Paenibacillus sp. Y412MC10] Length = 341 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 111/326 (34%), Gaps = 56/326 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGR---------------------PDIDL 36 MK LV G G I + +Q EI+ + + D+ Sbjct: 1 MKLLVTGGAGFIGSNFVIYMLQQYPKYEIVNMDALTYAGNLENLKSVENNANYTFINADI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPC 95 + F +V++N AA + VD++ EPE+ + N G + AA Sbjct: 61 ANKEAVEQIFEQHQIEVVVNFAAESHVDRSILEPEVFVNTNVLGTQVLLDAAKKHNVTKF 120 Query: 96 IYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 + +STD V+ L T E +P P + Y SK G+ V +Y + I R + Sbjct: 121 VQVSTDEVYGSLGETGLFTEETPLAPNSPYSASKAGGDLLVRAYHETFGLPVNITRCSNN 180 Query: 151 YSI--FGSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTS 206 Y F + M+ A + V D AI + H + Sbjct: 181 YGPLQFPEKLIPLMISRALNDEALPVYGDGLNIRDWLYVEDHCSAIDLVIHKGVSGE--- 237 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC---L 263 ++++ + + + I E G P S + + RP + + Sbjct: 238 ---VYNIGGNNERTNVH-IVQKILQE---LGKPESLISYVDD--------RPGHDRRYGI 282 Query: 264 DCSKLANTHNIRIST-WKEGVRNILV 288 D +K+ N + ++ G++ + Sbjct: 283 DPTKIMNELGWKPKHNFETGIKETIQ 308 >gi|301766530|ref|XP_002918693.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Ailuropoda melanoleuca] Length = 356 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 72/328 (21%), Positives = 109/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 19 RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 F + D++++ AA T VD + +N G + AA G I Sbjct: 79 NSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEAGVEKFI 138 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 139 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVYG 198 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 199 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 253 Query: 209 GIFHMTADGGPVSWADFAEYIFWESA------ERGGPYSKVYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 254 -IYNIGTNF-EMSVLQLAKELIQLIKETSSESEMENWVDYVNDRPTNDMRYPMK------ 305 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 306 ----SEKIHG-LGWRPKVPWKEGIKKTI 328 >gi|319650316|ref|ZP_08004460.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] gi|317397995|gb|EFV78689.1| hypothetical protein HMPREF1013_01065 [Bacillus sp. 2_A_57_CT2] Length = 324 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 114/315 (36%), Gaps = 44/315 (13%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------PDIDLLKPKDFAS 44 MK L+ G G I ++ +D E++ + ID+ + Sbjct: 18 MKVLLTGGAGFIGSHIAEELIKEDYEVVILDSLVTGQEHNIPAGARFYHIDIC--GNLDP 75 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 FL+ PD +I+ AA +V + P++ N G + A I+ ST + Sbjct: 76 IFLAEKPDYVIHQAAQVSVSNSLIHPKLDGESNIIGTINLLNACVRHQTKKFIFASTAAL 135 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + + IDE P +P++ YG SKL E + +++ +Y ILR + VY + Sbjct: 136 YGNPNYLSIDEEHPVSPISFYGLSKLNAESYIKLFSDLYGLSYTILRYSNVYGMRQDTKG 195 Query: 158 ---FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 + + A + +++ D F + +A I +++ Sbjct: 196 EAGVVAIFIERAITGQSMNIYGDGFQ----TRDFV-FVKDVAKANAAAILYGDNEIINIS 250 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNI 274 + S D + + S+V I+ ++ R +SCL K Sbjct: 251 NNT-QTSIKDIVNELNYLVE------SEVMPIYHEE-REGDIR--HSCLSNKKALKLLKW 300 Query: 275 RIS-TWKEGVRNILV 288 T+ +G+R + Sbjct: 301 EPRYTFIDGLRETVA 315 >gi|315156972|gb|EFU00989.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0043] Length = 310 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + +I V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVIVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|168210399|ref|ZP_02636024.1| UDP-glucose 4-epimerase [Clostridium perfringens B str. ATCC 3626] gi|168216625|ref|ZP_02642250.1| UDP-glucose 4-epimerase [Clostridium perfringens NCTC 8239] gi|170711514|gb|EDT23696.1| UDP-glucose 4-epimerase [Clostridium perfringens B str. ATCC 3626] gi|182381377|gb|EDT78856.1| UDP-glucose 4-epimerase [Clostridium perfringens NCTC 8239] Length = 328 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 104/315 (33%), Gaps = 51/315 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG-----RPDI---------DLLKPKDFASF 45 M LV G G I + + +++ E++ + D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E P N YG+SKL E+ + Y I TA Y + + Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRYFNAAGAHVNGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTS 206 +R +I + D + T T + + + Sbjct: 181 EDHAPETHLIPLILQVALGKRDKIMMFGDDYDTKDGTCVRDYIHVSDLASAHSLALERLM 240 Query: 207 LRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G I+++ G + + + + G + I + P +A PA L Sbjct: 241 NGGESRIYNLGNGTGFT-----VKEVVEVARKVTG-----HPIPAEVAPRRAGDPA--IL 288 Query: 264 --DCSKLANTHNIRI 276 K N + Sbjct: 289 IASSDKAIEELNWKP 303 >gi|222481362|ref|YP_002567598.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] gi|222454738|gb|ACM59001.1| NAD-dependent epimerase/dehydratase [Halorubrum lacusprofundi ATCC 49239] Length = 315 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 60/298 (20%), Positives = 92/298 (30%), Gaps = 40/298 (13%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-----RVGRPDI----------DLLKPKDFASFFL 47 LV G G I L ++ GR D+ + A Sbjct: 19 VLVTGGAGFIGSHLVDALAPVADVHVLDDCSTGRQTAVHGDATLTVGDITDHETLADAVA 78 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 D + + AA ++V A +P A +N + A G ++ S+ V+ Sbjct: 79 GT--DYVFHLAAISSVPGAMADPPRALDVNVSATADLLDLATDAGARVVFASSAAVYGDP 136 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS-NFLLSM 162 S PI E +P YG SKLAG+ V Y + + V LR VY + + S Sbjct: 137 SSVPIGETDAKDPREPYGVSKLAGDHLVRGYADWKDLDTVALRLFNVYGPGQTGGVVPSF 196 Query: 163 LRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 L + + V D Q + RA++ A + G Sbjct: 197 LEQVQRGEPLVVHGDGTQTRDFVHVDDVVRAMVAAARTDATGESFN-------VGTGDVT 249 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 S + A + + V + P A P S D +K T Sbjct: 250 SIHELATVVRDAA------PVTVDVVHDD--PRPADVPE-SQADTTKARRDLEFEART 298 >gi|110800926|ref|YP_694742.1| UDP-glucose 4-epimerase [Clostridium perfringens ATCC 13124] gi|110675573|gb|ABG84560.1| UDP-glucose 4-epimerase [Clostridium perfringens ATCC 13124] Length = 328 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 104/315 (33%), Gaps = 51/315 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG-----RPDI---------DLLKPKDFASF 45 M LV G G I + + +++ E++ + D DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHEDAILSGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E P N YG+SKL E+ + Y I TA Y + + Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRYFNAAGAHVNGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTS 206 +R +I + D + T T + + + Sbjct: 181 EDHAPETHLIPLILQVALGKRDKIMMFGDDYDTKDGTCVRDYIHVSDLASAHSLALERLM 240 Query: 207 LRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G I+++ G + + + + G + I + P +A PA L Sbjct: 241 NGGESRIYNLGNGTGFT-----VKEVVEVARKVTG-----HPIPAEVAPRRAGDPA--IL 288 Query: 264 --DCSKLANTHNIRI 276 K N + Sbjct: 289 IASSDKAIEELNWKP 303 >gi|91773971|ref|YP_566663.1| NAD-dependent epimerase/dehydratase [Methanococcoides burtonii DSM 6242] gi|91712986|gb|ABE52913.1| NAD-dependent sugar epimerase [Methanococcoides burtonii DSM 6242] Length = 299 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 59/321 (18%), Positives = 101/321 (31%), Gaps = 57/321 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFASFF 46 + L+ G GQ+ L ++ E+ + R D+ D+ D + Sbjct: 3 RILITGGAGQVGSYLVDRFHEENEVTILDNYSSPTRKDVPEGVSVIKADIRD--DISEHM 60 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 + DVII+ AA +V ++ +EP N G + + A +Y S+ + Sbjct: 61 SNT--DVIIHTAAQISVVRSMNEPFFDAQNNIMGTLNLLEEARHANIERFVYFSSAATYG 118 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN---- 157 + PI E P PL+ YG SKLAGE+ Y Y +R +YS Sbjct: 119 NPLKVPIGETHPQEPLSPYGASKLAGEKYCIMYNKAYGLPTTCIRPFNIYSPRQDPSNPY 178 Query: 158 --FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + + ++ D Q I + + ++ Sbjct: 179 SGVISKFIDKVSGGASPTIFGDGEQTRDFIYVRDIVDLVDLMISKRTAIGESFN------ 232 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP-----AYSCLDCSKL 268 A G + + AE I + Y P +S D SK Sbjct: 233 AATGRSTTINELAEIIIDLFGKELK----------ADY----KDPLEGDIKHSVADISKA 278 Query: 269 ANTHNIRISTWKEGVRNILVN 289 + ++G+ L Sbjct: 279 EKLGFVPKVDLRKGLETFLEK 299 >gi|255659098|ref|ZP_05404507.1| UDP-glucose 4-epimerase [Mitsuokella multacida DSM 20544] gi|260848542|gb|EEX68549.1| UDP-glucose 4-epimerase [Mitsuokella multacida DSM 20544] Length = 329 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 106/325 (32%), Gaps = 66/325 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDI----------DLLKPKDFAS 44 M LV G G I V+ E + + G D D+ Sbjct: 1 MSILVCGGAGYIGSHAVHQLVEKGEDVVIVDNLQTGHRDALNPKAKFYEGDIRDAAILDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYV 103 F + +I+ AA + V ++ +P F+ N G + ++ + ++ ST V Sbjct: 61 IFTENDIEAVIHFAANSLVGESVQKPLKYFNNNVYGMQVLLESMVRNHVDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + R PI E PT P N YG+SK E+ + + I + Y Sbjct: 121 YGEPKRVPIMEDDPTEPTNPYGESKRTMEKMMKWVSRADGIRYVSLRYFNAAGALDDGSI 180 Query: 152 -SIFGSNFLLSMLRL---AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L L L +R I+V D + TP + +A A + L Sbjct: 181 GEDHNPETHLIPLILQVPLGKRDHITVFGDDYPTPDGTCLRDYIHVIDLADAHVLALEYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERG-GPYSKVYRIFTKQYPTKAHR- 257 + +++ IF++ G F+ E+A++ G KV A R Sbjct: 241 RKGGESN---IFNLGNGKG------FSVKEMIEAAKKATGKDIKVE--------MGARRA 283 Query: 258 --PAYSCL--DCSKLANTHNIRIST 278 PA L K + Sbjct: 284 GDPA--QLIASSEKARKLLGWKPRY 306 >gi|169826853|ref|YP_001697011.1| putative UDP-glucose 4-epimerase [Lysinibacillus sphaericus C3-41] gi|168991341|gb|ACA38881.1| Putative UDP-glucose 4-epimerase [Lysinibacillus sphaericus C3-41] Length = 308 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 119/320 (37%), Gaps = 50/320 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGR-PDID------LLKPKD--FASF 45 M LV G G I ++ ++ ++ + G ++D LL +D Sbjct: 1 MNVLVTGGYGFIGSAVGRRFFEEGASVYIIDNLSTGHLRNVDFEHKSYLLNVEDEVCEHL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F DV+I+ AA T+V ++ EP N G + + + ++ S+ V+ Sbjct: 61 FKETHFDVVIHCAAQTSVQQSLQEPVKDILTNIVGLSQMLFLSSKYKVKHFVFASSAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN--- 157 P++E P+++YG +K GE + +Y +I R A V+ Sbjct: 121 GNSHYPPLEETDVCEPISMYGLNKSIGETYCEKWQKDYRLPILIYRFANVFGPRQQMQGE 180 Query: 158 --FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + SML+ + E R ++ D Q IA AI H+ ++ GI+++ Sbjct: 181 AAVIPSMLKSSMEGRPFTIYGDGEQTRDFIYVDDIADAIYAGVHSRLQ-------GIYNV 233 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--AYSCLDCSKLANT 271 + + S + P QY A +S L+ KLAN Sbjct: 234 STNEAW-SLHQ----VILLLQHLNHPLEI-------QY-APAREGDIEHSFLNNDKLANA 280 Query: 272 HNIRIS-TWKEGVRNILVNI 290 R ++ EG+ L + Sbjct: 281 IGWRPKISFAEGIERTLNAL 300 >gi|15894708|ref|NP_348057.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|15024370|gb|AAK79397.1|AE007654_6 UDP-glucose 4-epimerase [Clostridium acetobutylicum ATCC 824] gi|325508846|gb|ADZ20482.1| UDP-glucose 4-epimerase [Clostridium acetobutylicum EA 2018] Length = 327 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 87/255 (34%), Gaps = 37/255 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD---------IDLLKPKDFASF 45 M LV G G I +++ +++ V+ + G + DL Sbjct: 1 MNVLVCGGAGYIGSHMAAYLLENGHNVVIVDNLTTGHKESILNNKLYVGDLRDEDFLNKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F D +I+ AA + V ++ P F N + + +A + + I + ST + Sbjct: 61 FDENKIDAVIDFAANSLVGESVANPLKYFDNNIQSVVKLLEAMKNHDVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E T P N YG+SKLA E+ + N Y I TA Y S + Sbjct: 121 GEPDNIPILEGDKTFPTNPYGESKLAVEKILKWCDNAYGIKYTALRYFNACGAHISGNIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTS 206 +R +I + D + T T + +L+ Sbjct: 181 EDHNPETHLIPLILQVALGKRDKIMIYGDDYDTEDGTCVRDYVHVSDLASAHLLALERLK 240 Query: 207 LRG---IFHMTADGG 218 G I+++ G Sbjct: 241 NGGKSAIYNLGNGKG 255 >gi|307103361|gb|EFN51622.1| hypothetical protein CHLNCDRAFT_140037 [Chlorella variabilis] Length = 311 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 63/308 (20%), Positives = 109/308 (35%), Gaps = 42/308 (13%) Query: 3 CLVIGNNGQIAQSLSS-MCVQDVEIIRVGRP-------------DIDLLKPKDFASFFLS 48 LV G +G + Q + + ++ R +DL + + Sbjct: 6 VLVTGASGYLGQFVVEWYAGKGWKVGCTYRTGEAPKFGSGVQVFRVDLGSGEGLHEGCDA 65 Query: 49 FSP-DVIINPAAYTAVDKAEDEPEIA-FSINAEGAGAIAKAADSIGIPCIYISTDYVFDG 106 P +IN AA A E E E A ++N ++ISTD+V+DG Sbjct: 66 LGPLAAVINCAAQAAPAACEGEGEAAARAVNVPQP------------VLVHISTDHVYDG 113 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYS------IFGSNFLL 160 + E + P+N YG++K GE +VA +VILR + ++ I FL Sbjct: 114 -GSSFYREDAELRPVNTYGRTKADGEAEVALRWRRHVILRPSIIFGPPPPNPIRRGQFLQ 172 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGP- 219 + ++ + D++ TPT + A + GGP Sbjct: 173 FVDSCLAAQKPSTFFTDEWRTPTYVKDLVAACAAAVDACDALPAAPPHAR--VFNVGGPA 230 Query: 220 -VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRIST 278 ++ D A + + RG + PA +D S + +R++ Sbjct: 231 RINRLDMALAV---AEVRGHDPALALPGSAAAVARTCATPADISMDTSAVEAVLGVRMTP 287 Query: 279 WKEGVRNI 286 + E +R I Sbjct: 288 FTEALRQI 295 >gi|253574439|ref|ZP_04851780.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846144|gb|EES74151.1| nucleoside-diphosphate-sugar epimerase [Paenibacillus sp. oral taxon 786 str. D14] Length = 329 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 107/309 (34%), Gaps = 52/309 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI------DLLKPKDFAS 44 MK LV G G I + + + + +++ V + ++ D++ + Sbjct: 1 MKVLVTGGAGFIGRHTVKRLVEEGEQVVVVDTGLPGNLRKKDELVTYYATDIM-SDELEL 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F PD +I+ AA T+V ++ P N G + + G ++ S+ V Sbjct: 60 IFAEERPDAVIHLAAQTSVRRSLQNPTADAETNILGTIQLLEQCIRFGVRRIVFASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV----ILRTAWVYSIF----- 154 + PI E PL+ YG SK E + S++ Y ILR A VY + Sbjct: 120 YGNPDHLPIKESQRPEPLSFYGVSKRVSEMYIQSFSERYGLEYSILRYANVYGVREQRTG 179 Query: 155 GSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 L + + + V D Q IA A +Q + I + Sbjct: 180 EDGVLTAFVERLIAGLPLEVYGDGSQTRDFVYVKDIAEANVQALRC-------AGSQIIN 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY---SCLDCSKLA 269 +++ G +S + A + E + R V Q+ A P S LD K+ Sbjct: 233 VSSGRG-ISILE-ALGVLSEISGR-----HVQP----QF-RPAQ-PGDIDQSVLDNGKVR 279 Query: 270 NTHNIRIST 278 Sbjct: 280 EILWWEPRY 288 >gi|167461788|ref|ZP_02326877.1| putative reductase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 276 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 25/256 (9%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGRPDID----LLKPKD---FASFFLSFSP 51 MK L++G +G + + + R D +D + P Sbjct: 1 MKVLIMGGDGMAGHLMVRYFREKTPHSVFYTSRNQKDPGSLYTDARDLVLVRHVVEAVHP 60 Query: 52 DVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTP 111 D+++N D AE +P A+ +N + + + +G + ISTD VF G Sbjct: 61 DILVNCIGILN-DSAERDPAQAYHVNGRLPHLLKQVVNQVGGKLVQISTDCVFSGKQGG- 118 Query: 112 IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERRE 171 +E+ + +Y +SK GE K ++ +RT+ V N + + + E Sbjct: 119 HEEWERPDGFTVYSRSKAMGEVK----DAPHLTIRTSIVGPEIRQNGIGLLNWFLNQSGE 174 Query: 172 ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEY--- 228 + + + + L++A+ + + DTSL GI H+TA VS + + Sbjct: 175 VKGYTEAYWNGVTTLELAKFVHHVME------DTSLNGIVHLTAPE-QVSKYELLQLFRN 227 Query: 229 IFWESAERGGPYSKVY 244 IF + P SKV Sbjct: 228 IFEKKDVELIPDSKVK 243 >gi|310817082|ref|YP_003965046.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] gi|308755817|gb|ADO43746.1| dTDP-glucose 4,6-dehydratase [Ketogulonicigenium vulgare Y25] Length = 349 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 84/250 (33%), Gaps = 41/250 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK L+ G G I ++ ++ + D+ Sbjct: 1 MKILITGGAGFIGSAVVRQAVAAGHHVVNLDALTYAACLDNVASVADSPLYAFEQADIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 + F +PD +++ AA + VD++ D P N G + +AA + Sbjct: 61 AAALEAVFARHAPDAVMHLAAESHVDRSIDGPGAFVETNVMGTYTLLQAARAYWEGRGKP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 G +ISTD VF L P E +P +P + Y SK A + V ++ Y V Sbjct: 121 EGFRFHHISTDEVFGSLPHDPAVKFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPVV 180 Query: 144 ILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNL 199 + + Y F + ++ A + + + D A A++ + Sbjct: 181 LTNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGSNIRDWLYVEDHATALLTVLEKG 240 Query: 200 IENSDTSLRG 209 ++ G Sbjct: 241 KLGRSYNIGG 250 >gi|115377423|ref|ZP_01464627.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1] gi|310820399|ref|YP_003952757.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] gi|115365580|gb|EAU64611.1| sugar dehydratase/epimerase [Stigmatella aurantiaca DW4/3-1] gi|309393471|gb|ADO70930.1| DTDP-4-dehydrorhamnose reductase [Stigmatella aurantiaca DW4/3-1] Length = 302 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 110/291 (37%), Gaps = 36/291 (12%) Query: 1 MK-CLVIGNNGQIAQSL-SSMCVQDVEIIRVGRPD-----------IDLLKPKDFASFFL 47 M+ L+IG +G I + L ++ ++ R +D +P A Sbjct: 1 MRQVLIIG-SGFIGRRLGQALREAGHSVVLSSRHPPEGPWAGDWRGLDASRPGAIAEAVG 59 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + ++ + + E PE A + +A A + + A ++ + ISTD VFDG Sbjct: 60 ATGAHAVVLVHGPSDITGCESAPEAAMATHAGIATHLCQEAPTV--RKVLISTDNVFDGQ 117 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFG-------SNFLL 160 DE +P N YG++KLA E + + +I+RT+ VY NF + Sbjct: 118 DTG-YDESRAPSPANAYGRAKLAAERVLLAADPGALIVRTSLVYGYEPRGPGRGWRNFFM 176 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 + + + + D + TP A + ++ G+ H+ V Sbjct: 177 VVADTVRSGQTVQAPVDHWNTPILVDDAAAVLTRLI-------PGGPSGVLHLAGPD-RV 228 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANT 271 S ++ I + G + V + + RPA +CL +L + Sbjct: 229 SRFEWGRLI---AQSLGQDPNLVRPVARAA-GRYSCRPANACLRSLRLHHL 275 >gi|120602752|ref|YP_967152.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris DP4] gi|120562981|gb|ABM28725.1| UDP-galactose 4-epimerase [Desulfovibrio vulgaris DP4] Length = 331 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 34/224 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI------IRVGRPD---------IDLLKPKDFASFF 46 LV G G I + V+ + + G + DLL + F Sbjct: 9 NVLVCGGAGYIGSHMVRALVEHGYVPIIFDNLSTGHAESVGDVDLVRGDLLDRQALRRLF 68 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 S D +++ +A + V ++ +P I F N G + +A G ++ S+ VF Sbjct: 69 AEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVGTINLLEAMREAGVSRLVFSSSAAVFG 128 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-------------- 151 I E P P+N YG+SKL E+ + Y N Y + + Y Sbjct: 129 NPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYANAYGMRSVSLRYFNAAGADEAGDIGE 188 Query: 152 -SIFGSNFLLSMLRLA-KERREISVVCDQFGTP--TSALQIARA 191 ++ + ++LR A E+ + D + TP T Sbjct: 189 SHKPETHLIPNVLRAALGTGPELKIFGDDYDTPDGTCVRDYIHV 232 >gi|330837996|ref|YP_004412576.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] gi|329745760|gb|AEB99116.1| UDP-glucose 4-epimerase [Selenomonas sputigena ATCC 35185] Length = 310 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 31/227 (13%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I L + + ++ + ++D+L +D Sbjct: 1 MNILVTGGAGFIGSHLVRHLLAKGEKVTALDNLSTGLAENLPPEAKLVEMDILD-EDLPK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + + D I++ AA T VD + P + N G + +AA + I+ ST Sbjct: 60 VVAAGAFDAIVHLAAQTMVDTSIKNPLLDTRENLMGTVQVLEAARAANVKRVIFASTAAA 119 Query: 104 FDGLSR--TPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSN 157 + + P+ E PT P++ YG SKL+ E+ + Y YV+LR A VY + Sbjct: 120 YGDVKEDDLPVREAQPTEPMSFYGLSKLSVEKYLEMYRKIYGMEYVVLRFANVYGERQGD 179 Query: 158 -----FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAH 197 + + E R+I++ D Q A IA I+ Sbjct: 180 GGEGGVISIFAKAVAEGRDITIYGDGEQTRDFVYAGDIAEGILAALR 226 >gi|46579771|ref|YP_010579.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|46449186|gb|AAS95838.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris str. Hildenborough] gi|311233562|gb|ADP86416.1| UDP-glucose 4-epimerase [Desulfovibrio vulgaris RCH1] Length = 331 Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 81/224 (36%), Gaps = 34/224 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEI------IRVGRPD---------IDLLKPKDFASFF 46 LV G G I + V+ + + G + DLL + F Sbjct: 9 NVLVCGGAGYIGSHMVRALVEHGYVPIIFDNLSTGHAESVGDVDLVRGDLLDRQALRRLF 68 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 S D +++ +A + V ++ +P I F N G + +A G ++ S+ VF Sbjct: 69 AEHSFDAVMHFSAKSLVGESMTDPGIYFVNNVVGTINLLEAMREAGVSRLVFSSSAAVFG 128 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-------------- 151 I E P P+N YG+SKL E+ + Y N Y + + Y Sbjct: 129 NPLTARIAEDHPRQPVNPYGRSKLMIEQALRDYANAYGMRSVSLRYFNAAGADEAGDIGE 188 Query: 152 -SIFGSNFLLSMLRLA-KERREISVVCDQFGTP--TSALQIARA 191 ++ + ++LR A E+ + D + TP T Sbjct: 189 SHKPETHLIPNVLRAALGTGPELKIFGDDYDTPDGTCVRDYIHV 232 >gi|328471286|gb|EGF42186.1| UDP-glucose 4-epimerase [Listeria monocytogenes 220] Length = 330 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 109/316 (34%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M +V+G G I ++ + + E++ R G + D+ +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F D +I+ AA + V ++ + P + + N G + + + G+ ++ S+ Sbjct: 61 VFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PTNP + YG++KL E+ + +Y YV LR V + Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALRYFNVAGAKADGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 181 GEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIKALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ + G F+ E+A I + P +A P Sbjct: 241 KNGGESNIFNLGSSNG------FSVKEMLEAAR----TVTGKEIPAEVVPRRAGDPGTLI 290 Query: 263 LDCSKLANTHNIRIST 278 K + Sbjct: 291 ASSDKAREILGWEPTY 306 >gi|315167711|gb|EFU11728.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1341] Length = 310 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|257387487|ref|YP_003177260.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] gi|257169794|gb|ACV47553.1| NAD-dependent epimerase/dehydratase [Halomicrobium mukohataei DSM 12286] Length = 328 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 85/249 (34%), Gaps = 42/249 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVG---------------------------RP 32 MK LV G G I ++ V +++ + R Sbjct: 1 MKILVTGGAGFIGGHIAERFVVDGHDVVALDNLDPFYDVDIKRHTIERCREHASSGDGRY 60 Query: 33 DI---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD 89 ++ D+ + D + + AA V ++ + P +N +G + AA Sbjct: 61 ELVEGDVRDADLVSELVADA--DYVYHQAAQAGVRQSVENPRKYDEVNVDGTLNLLDAAR 118 Query: 90 SIG-IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VI 144 G + S+ V+ P DE PT P++ YG SKLA E V +Y+ Y V Sbjct: 119 ETGIERFVMASSSSVYGKPRYLPYDEEHPTTPVSPYGASKLAAERYVCAYSEVYDLSAVA 178 Query: 145 LRTAWVYSIFGSNFLLSMLRLAK--ERREISVVCD--QFGTPTSALQIARAIIQIAHNLI 200 LR VY + +++ + R V D Q T + A + + Sbjct: 179 LRYFTVYGPRMRPNMAISNFVSRCLDGRSPVVYGDGSQTRDFTFVEDVVEANVALLDTDA 238 Query: 201 ENSDTSLRG 209 + + G Sbjct: 239 ADGEAINVG 247 >gi|254171998|ref|ZP_04878674.1| UDP-glucose 4-epimerase [Thermococcus sp. AM4] gi|214033894|gb|EEB74720.1| UDP-glucose 4-epimerase [Thermococcus sp. AM4] Length = 310 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 104/319 (32%), Gaps = 52/319 (16%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDF 42 M+ +V G G I ++ V+D ++I G+P+ D+ Sbjct: 1 MRNKLIVVTGGAGFIGSHIAWELVKDNDVIVIDNLYTGKPENVPPGAKLVKADIRDYSAI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V ++ +P +N G I +A I+ S+ Sbjct: 61 AELISQA--DYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNIIRALLEGHGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS-- 156 V+ P+ E PL+ YG +K EE + Y Y V LR V+ S Sbjct: 119 VYGDNPNLPLKETERPRPLSPYGVTKATAEEYLRVYHELYGLPVVALRYFNVFGPRQSFN 178 Query: 157 ---NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + + A + + D Q + RA + +A + N Sbjct: 179 QYAGVISIFINRALAGEPLVIFGDGKQTRDFIYVKDVVRANLLVAESRKANGRVFN---- 234 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 A G S + A I + T RP +S D S++ Sbjct: 235 --VATGRQTSILELAMKIIEITG------------TTSSIIFDKPRPGDIRHSLADISEI 280 Query: 269 ANTHNIRISTWKEGVRNIL 287 + +EG++ + Sbjct: 281 RKLGFEPEFSLEEGLKKTV 299 >gi|113374879|gb|ABI34796.1| UDP-glucose 4'-epimerase [Thermus aquaticus] Length = 311 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 106/325 (32%), Gaps = 65/325 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--------------EIIRVGRP--DIDLLKPKDFAS 44 M+ LV G G I ++ +++ E + G P +DL + Sbjct: 1 MRVLVTGGAGFIGSHIAEALLREGLEVAVLDNLSTGKRENVPPGVPFYQVDLRDGEGVER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P + + AA +V + ++P + F++N G + +A G ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACRRHGVEKLVFASTGGA 120 Query: 104 FDG--LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G +E P P + Y SK A E +++Y NY + + Y Sbjct: 121 IYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLKWVSLRYGNVYGPRQDP 180 Query: 162 MLRLA---------KERREISVVCDQFGTP---------TSALQIARAIIQIAHNLIENS 203 + +++ TP +A A +A +E Sbjct: 181 HGEAGVVAIFAERVLKGEPVTLYA--RRTPGDEGCVRDYVYVGDVAEA-HTLALLSLE-- 235 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY--- 260 G++++ G + + AE +V RP Sbjct: 236 -----GVYNVGTGEGHTT-----LEVLKAVAEAALKTPEVVHAP--------PRPGDLER 277 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVR 284 S L KL H R ++EG+R Sbjct: 278 SVLSPLKLM-AHGWRPRVGFREGIR 301 >gi|218296609|ref|ZP_03497327.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] gi|218242922|gb|EED09455.1| NAD-dependent epimerase/dehydratase [Thermus aquaticus Y51MC23] Length = 310 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 106/325 (32%), Gaps = 65/325 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--------------EIIRVGRP--DIDLLKPKDFAS 44 M+ L+ G G I ++ +++ E + G P +DL + Sbjct: 1 MRVLITGGAGFIGSHIAEALLREGLEVAVLDNLSTGKRENVPPGVPFYQVDLRDGEGVER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P + + AA +V + ++P + F++N G + +A G ++ ST Sbjct: 61 VFREFRPTHVSHQAAQASVKVSVEDPLLDFAVNLVGGMNLLEACRRHGVEKLVFASTGGA 120 Query: 104 FDG--LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 G +E P P + Y SK A E +++Y NY + + Y Sbjct: 121 IYGEVPEGEAAEETWPPRPKSPYAASKAAFEGYLSAYGQNYGLRWVSLRYGNVYGPRQDP 180 Query: 162 MLRLA---------KERREISVVCDQFGTP---------TSALQIARAIIQIAHNLIENS 203 + +++ TP +A A +A +E Sbjct: 181 HGEAGVVAIFAERVLKGEPVTLYA--RRTPGDEGCVRDYVYVGDVAEA-HTLALLSLE-- 235 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY--- 260 G++++ G + + AE +V RP Sbjct: 236 -----GVYNVGTGEGHTT-----LEVLKAVAEAALKTPEVVHAP--------PRPGDLER 277 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVR 284 S L KL H R ++EG+R Sbjct: 278 SVLSPLKLM-AHGWRPRVGFREGIR 301 >gi|124485719|ref|YP_001030335.1| hypothetical protein Mlab_0897 [Methanocorpusculum labreanum Z] gi|124363260|gb|ABN07068.1| NAD-dependent epimerase/dehydratase [Methanocorpusculum labreanum Z] Length = 337 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 92/251 (36%), Gaps = 37/251 (14%) Query: 3 CLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------------RPDI-----DL 36 L+ G G I LS + Q +++I PD DL Sbjct: 6 ILITGAAGFIGFHLSKKLLEQGIQVIGYDNINSYYDVNLKYARLAILKDYPDFIFVKGDL 65 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIPC 95 + + F + PD+++N AA V + D P++ N G I +A Sbjct: 66 ADKSEVENVFTKYKPDIVVNLAAQAGVRYSIDNPQVYIDSNIIGFFNILEACRHHPAEHL 125 Query: 96 IYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAW----V 150 IY S+ V+ +TP + + P+++Y +K + E +Y++ Y I T V Sbjct: 126 IYASSSSVYGNQEKTPFSTDDDVSRPISLYAATKKSNELMAYTYSHLYGIPTTGLRFFTV 185 Query: 151 YSIFGSNFLLSMLR----LAKERREISVVCDQFGTPTSALQIARAIIQIA-HNLIENSDT 205 Y +G + LA E +I D + T I + I + H + + Sbjct: 186 YGPYGRPDMAYFSFTRKILAGETIQIFNNGDMYRDFTYIDDIVQGIENMLEHPPAADENG 245 Query: 206 SLRGIFHMTAD 216 ++++ + Sbjct: 246 DRYKLYNIGNN 256 >gi|126736253|ref|ZP_01751996.1| UDP-glucose 4-epimerase [Roseobacter sp. CCS2] gi|126714419|gb|EBA11287.1| UDP-glucose 4-epimerase [Roseobacter sp. CCS2] Length = 338 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 104/304 (34%), Gaps = 63/304 (20%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGR-----PDI-----------------DLL 37 M+ LV G G I L + Q E+ + P++ D+ Sbjct: 1 MRVLVTGGAGYIGSHTLLELMAQGHEVCVLDNYSNATPEVLTRVRSLSNGVLHDYVGDVR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 F P+ +++ A AV ++ +P + +N G + +A G I Sbjct: 61 DSDKLDEVMQDFQPEAVVHFAGLKAVGESTQKPLHYYDVNVAGTLTLLRAMGRAGCHRIV 120 Query: 98 ISTDY-VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY-----VILRTAWVY 151 S+ V+ P DE PTNP+++YG+SKL E+ + +T Y V+LR Sbjct: 121 FSSSATVYGEPVYLPYDEAHPTNPMSVYGRSKLIAEQVLTDWTAAYPDTTAVLLRYFNPV 180 Query: 152 SIFGSNFLLSMLR-------------LAKERREISVVCDQFGTP--------TSALQIAR 190 S + + +R + V D + TP + +AR Sbjct: 181 GAHPSADIGEDPKDIPNNLMPFIAQVAVGKRDALQVFGDDYDTPDGTGLRDYIHVVDLAR 240 Query: 191 AIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQ 250 A + + + + I G S D F ++ + I TKQ Sbjct: 241 AHVAAINYAQDATGARPFNI----GTGQSYSVRDM-VAAFERASGQ--------PIATKQ 287 Query: 251 YPTK 254 P + Sbjct: 288 APRR 291 >gi|126337543|ref|XP_001377580.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 432 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 72/323 (22%), Positives = 116/323 (35%), Gaps = 50/323 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA L V+D II + + D D+ Sbjct: 100 RVLVTGGAGFIASHLIVSLVEDYPDYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 159 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 +P F + + D++++ AA T VD + +N G + AA ++ I Sbjct: 160 EPHFIKLLFETENIDIVLHFAAQTHVDLSFVHALEFTYVNVYGTHVLVSAAYEARVEKFI 219 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 220 YVSTDEVYGGSLDEEFDESSPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYG 279 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 280 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYAADVVEAFLTVLKKGKPGE----- 334 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS---CLDC 265 I+++ + +S A A+ + E + Y RP+ + Sbjct: 335 -IYNIGTNF-EMSIAQLAKELIQLIKETNSESEMENWV---DYVD--DRPSNDMRYPMKS 387 Query: 266 SKLANTHNIRIS-TWKEGVRNIL 287 K+ R +WKEG++ + Sbjct: 388 EKMHG-LGWRPKVSWKEGIKKTI 409 >gi|255010925|ref|ZP_05283051.1| putative UDP-glucuronic acid epimerase [Bacteroides fragilis 3_1_12] gi|313148731|ref|ZP_07810924.1| nucleoside-diphosphate-sugar epimerase [Bacteroides fragilis 3_1_12] gi|313137498|gb|EFR54858.1| nucleoside-diphosphate-sugar epimerase [Bacteroides fragilis 3_1_12] Length = 336 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/344 (17%), Positives = 110/344 (31%), Gaps = 76/344 (22%) Query: 1 MKCLVIGNNGQIAQ-SLSSMCVQDVEIIRVGRPD-------------------------- 33 MK LV G G I ++ ++ Q E++ + + Sbjct: 1 MKVLVTGAAGFIGSYTVKALIAQGCEVVGLDIINSYYDVQLKYDRLADTGIAKDSIEDGI 60 Query: 34 --------------IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAE 79 IDL F S DV++N AA V + + P N Sbjct: 61 LLPSSKYPSYRFIKIDLTDRDGLNHLFESEHFDVVVNLAAQAGVRYSIENPYAYIESNVV 120 Query: 80 GAGAIAKAADSIG-IPCIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVAS 137 G + + +Y S+ ++ + P E + P+++Y +K + E + Sbjct: 121 GFLNLLECCRHYPVNHLVYASSSSIYGLNDKVPYAETDKADTPVSLYAATKKSNELMAHA 180 Query: 138 YTNNYVI----LRTAWVYSIFGSNFLLSML--RLAKERREISVVC--DQFGTPTSALQIA 189 Y+ Y I +R VY +G + L + I V T I Sbjct: 181 YSKLYGIPTTGVRFFTVYGPWGRPDMAPCLFMKAILNGDPIKVFNNGQMRRDFTYIDDII 240 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE------RGGPYSKV 243 +++I + ++D I+++ + PV DF I + + G V Sbjct: 241 AGLMKIIAH--PSADPIPFYIYNI-GNSAPVELMDFISVIEKTAGKTAVKQMMGMQPGDV 297 Query: 244 YRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 + D S+L N + ++ +EG+R Sbjct: 298 VCTYA---------------DTSRLENDFGYKPSTSIEEGIRKF 326 >gi|154687523|ref|YP_001422684.1| hypothetical protein RBAM_031220 [Bacillus amyloliquefaciens FZB42] gi|154353374|gb|ABS75453.1| hypothetical protein RBAM_031220 [Bacillus amyloliquefaciens FZB42] Length = 309 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 83/248 (33%), Gaps = 27/248 (10%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDV----------EIIRVGRPDIDLLKPKDFASFFLSF 49 MK +IG G I L+++ D+L Sbjct: 1 MKHIAIIGGAGFIGSELAALLQDKGYHTIIADQKEPAFDTEYRQTDILDRTSLRESLRGA 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLS 108 D +++ AA VD E +N EG + + +G ++ S+ VF Sbjct: 61 --DAVVHLAAMVGVDSCRSNEEDVIRVNFEGTKNVTEVCGELGISTLLFSSSSEVFGDSP 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSML 163 P E S P + YGK+KL EE + ++ + +R ++++G + Sbjct: 119 DFPYTETSRKLPKSAYGKAKLQSEEYLREQASDELHIRVVRYFNVYGPKQREDFVINKFF 178 Query: 164 RLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 LA+ E+ + D Q + I + + G + P++ Sbjct: 179 SLAENGSELPLYGDGGQIRCFSYISDIVTGTYLALTHEGAVFEDFNIG------NDQPIT 232 Query: 222 WADFAEYI 229 + AE + Sbjct: 233 IKELAEKV 240 >gi|331701742|ref|YP_004398701.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] gi|329129085|gb|AEB73638.1| UDP-glucose 4-epimerase [Lactobacillus buchneri NRRL B-30929] Length = 334 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 109/317 (34%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 M LV+G G I +++ V+ + G + D+ Sbjct: 1 MAILVLGGAGYIGSHTVDRLIENGYDVAVVDNLVTGHKAAINPKARFYEGDVRDKDFMNQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA++ V ++ ++P F N G ++ + ++ ++ ST Sbjct: 61 VFDKEEIEGVIHFAAFSVVPESMEKPLKYFDNNTGGMISLLEVMNAHNVKKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SI 153 + + PI E P P N YG+SKLA E+ + Y I A Y SI Sbjct: 121 YGEPKQIPIKETDPQVPTNPYGESKLAMEKIMHWSDVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 154 FGSNFLLSML------RLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + L A ER E+++ D + TP T+ + +A I Sbjct: 181 GEDHHPETHLVPIILQVAAGERDELTIFGDDYDTPDGTNVRDYVHVL-DLADAHILALKY 239 Query: 206 SLRGI----FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 G F++ + G F+ ++A I K P +A P S Sbjct: 240 LQAGHDSDAFNLGSSTG------FSNKQMLDAAR----DVTGKPIPAKMGPRRAGDP--S 287 Query: 262 CL--DCSKLANTHNIRI 276 L K + Sbjct: 288 TLIAASDKARKILGWKP 304 >gi|212224061|ref|YP_002307297.1| UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] gi|212009018|gb|ACJ16400.1| UDP-glucose 4-epimerase [Thermococcus onnurineus NA1] Length = 308 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/321 (17%), Positives = 106/321 (33%), Gaps = 56/321 (17%) Query: 1 MK---CLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDF 42 M+ +V G G I ++ +D E+I + R ++ D+ + Sbjct: 1 MRNKLVVVTGGAGFIGSHIAWELSKDNEVIVIDNLHTGKRENVPPAAKFVRADIRDYESI 60 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 A D + + AA +V ++ +P +N G I +A I+ S+ Sbjct: 61 AELIS--HADYVFHEAAQVSVVESVRDPIFTEEVNVIGTLNILRALMEGHGKLIFASSAA 118 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------SI 153 V+ P+ E PL+ YG +KL E+ + + Y I + Y + Sbjct: 119 VYGNNPNLPLKETETPRPLSPYGVTKLTAEQYLRVFNELYGIPAVSLRYFNVFGPRQSAN 178 Query: 154 FGSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 + + + A + + + D Q + RA I +A + N Sbjct: 179 QYAGVISIFINRALKNEPLVIFGDGKQTRDFIYVKDVVRANILVAESRKANGRVFN---- 234 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 A G + + A I + + K RP +S D S++ Sbjct: 235 --VATGRQTTILELAMKIIE-----------ITNATSSILFDK-PRPGDIRHSQADISEI 280 Query: 269 ANTHNIRISTW--KEGVRNIL 287 W ++G++ + Sbjct: 281 RKLGFE--PEWTLEDGLKKTV 299 >gi|313201556|ref|YP_004040214.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] gi|312440872|gb|ADQ84978.1| UDP-glucose 4-epimerase [Methylovorus sp. MP688] Length = 324 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 94/278 (33%), Gaps = 44/278 (15%) Query: 4 LVIGNNGQIAQSLSS-MCVQDVEIIRVG------RP--------DIDLLKPKDFASFFLS 48 +V+G G I + + + ++I R DL F+ Sbjct: 1 MVVGGAGYIGSHMVKMLLGEGHDVITFDNLSSGYRDAVVGGTFVQADLADKAALDEVFVK 60 Query: 49 FSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGL 107 +PD +++ A+Y V ++ P+ + N + A G I+ ST VF Sbjct: 61 HAPDAVMHFASYIQVGESVRHPDKYYLNNFTNTMNLLDAMVKNGVNYFIFSSTAAVFGEP 120 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSML 163 PIDE NPLN YG+SKL E+ + Y Y I Y L Sbjct: 121 EYVPIDEAHAKNPLNPYGRSKLMVEQALGDYERAYGIKSVCLRYFNAAGADPEGQLGERH 180 Query: 164 R------------LAKERREISVVCDQFGTP--TSALQIARAIIQIA----HNLIENSDT 205 ++ R I+V + TP T I+ + L + +T Sbjct: 181 EPETHLIPLVLQAISGRRDNITVFGRDYDTPDGTCIRDYIH-IVDLCSAHSLALRKLMET 239 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 ++ +++ G + + + + G KV Sbjct: 240 NISRRYNLGNGAGFS-----VQEVIAAAQKVTGKPIKV 272 >gi|317483484|ref|ZP_07942471.1| NAD dependent epimerase/dehydratase [Bifidobacterium sp. 12_1_47BFAA] gi|316915065|gb|EFV36500.1| NAD dependent epimerase/dehydratase [Bifidobacterium sp. 12_1_47BFAA] Length = 354 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 102/338 (30%), Gaps = 63/338 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDI--------------------- 34 LV G G I +L+ + +E I V D+ Sbjct: 12 VLVTGAAGFIGSNLAKQLLDSIEGIHVIGFDNVNDYYDVRLKEYRLNQLSHYEGFTFIKA 71 Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 DL F + P V++N AA V + P+ N G I +A Sbjct: 72 DLADKDAVNDVFEQYRPTVVVNLAAQAGVRYSITHPDAYIQSNLIGFYNILEACRHHPVD 131 Query: 94 PCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAW--- 149 +Y S+ V+ + P NP+++Y +K + E +Y+ Y I T Sbjct: 132 HLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSDELLAHAYSKLYDIPSTGLRFF 191 Query: 150 -VYSIFGSNFLLSMLR--LAKERREISVVC--DQFGTPTSALQIARAIIQIAHNLI---- 200 VY G + + I + + T I I+++ Sbjct: 192 TVYGPAGRPDMAYFGFTNKLRAGETIKIFNYGNCRRDFTYVDDIVEGILRVMQGAPSKQT 251 Query: 201 --ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS--------KVYRIFTKQ 250 + ++++ +G P + +F + E + ++ + Sbjct: 252 GEDGLPVPPYAVYNI-GNGHPENLLEFVTILQEELLRAKVLPADYDFESHKELVPMQPGD 310 Query: 251 YP-TKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 P T A D + L + + EG+R Sbjct: 311 VPVTYA--------DTAALERDFGYKPSTPLCEGLRRF 340 >gi|78357225|ref|YP_388674.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219630|gb|ABB38979.1| dTDP-glucose 4,6-dehydratase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 340 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 104/328 (31%), Gaps = 56/328 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGR------------------------PD 33 M+ LV G G I + + I+ + + Sbjct: 1 MRLLVTGGCGFIGTNFIRYQLNVHPQTTIVNLDKLTYAGNPQNLTDIQQAHGGTRYFFEK 60 Query: 34 IDLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 D+ + +SPD ++N AA + VD++ +P + N G + +AA + G Sbjct: 61 ADIADAAAVQAVIEKYSPDAVLNFAAESHVDRSISDPAPFVTTNVLGTQVLMQAARTAGI 120 Query: 93 IPCIYISTDYVFDG--LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR 146 ++ISTD V+ P E +P P + Y SK + V ++ Y +I R Sbjct: 121 KRFVHISTDEVYGSLLPHEAPFTESNPLLPNSPYSASKAGADLMVRAFVETYGFPAIITR 180 Query: 147 TAWVYSIFGSNFLLSMLRLAK--ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 + Y + L L L K E + V D T+ + Sbjct: 181 CSNNYGPYQFPEKLIPLMLGKAWENAPLPVYGDG----TNVRDWIHVEDHCRGIDLALRK 236 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC-- 262 +++ + + D I + + S V RP + Sbjct: 237 GRDGAVYNFGGNAERTN-LDVVRAILRLTGKPESLISFVKD-----------RPGHDRRY 284 Query: 263 -LDCSKLANTHNIRI-STWKEGVRNILV 288 +D + + ++ G+ + L Sbjct: 285 AMDFTLAGDELGYAPVHDFETGLADTLA 312 >gi|119513274|ref|ZP_01632315.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] gi|119462062|gb|EAW43058.1| UDP-glucose 4-epimerase [Nodularia spumigena CCY9414] Length = 326 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 87/243 (35%), Gaps = 40/243 (16%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEII-----RVGRPDI---------DLLKPKDFASFFL 47 LV G G I + + +I+ G P DL + F Sbjct: 1 VLVTGGAGYIGSHVVRKLGEAGYDIVVYDNCSTGSPQAVLYGELIVGDLKDSTTLSQVFS 60 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 +++ AA V ++ P ++ N + + +G+ I+ ST V+ Sbjct: 61 QHEFTAVLHFAASLNVPESVSRPLDYYANNTCNTLNLLRCCHKMGVKQIIFSSTAAVYGQ 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLSM 162 + P+ E++PT P+N YG+SKLA E + Y YVILR V L M Sbjct: 121 PEKIPVTEYTPTQPINPYGRSKLACEWLIRDYAQASDLRYVILRYFNVAGAEPGGRLGQM 180 Query: 163 LR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIEN 202 LR + R E+ + F TP +A A + L + Sbjct: 181 LRDASHLIRVSCDAALQRRTEVKIFGTDFPTPDGTAIRDYIHVEDLAAAHLDALTYLEQG 240 Query: 203 SDT 205 +++ Sbjct: 241 NES 243 >gi|220910181|ref|YP_002485492.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] gi|219866792|gb|ACL47131.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7425] Length = 329 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 89/259 (34%), Gaps = 46/259 (17%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RPDI------------DLLKPKDFAS 44 LV G G I ++ S+ +I + ++ D+ Sbjct: 5 ILVTGGAGYIGSHAVLSLKQAGYSVIVLDNLVYGHRELVEDVLQVKLIGGDINDRALLDQ 64 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +++ AAY V ++ P + N G + +A + G ++ ST Sbjct: 65 IFAQHQIEAVMHFAAYAYVGESVTNPAKYYRNNVAGTLTLLEAMVAAGVSKLVFSSTCAT 124 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P NP+N YG SKL E + + + Y + + Y Sbjct: 125 YGVPQQLPIPETHPQNPINPYGMSKLMVEAMLTDFDHAYGLRSVRFRYFNAAGADPSGRL 184 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + L +L +R ISV + TP +A A +Q L Sbjct: 185 GEDHNPETHLIPLVLLTALGKRESISVFGQDYDTPDGTCIRDYIHVTDLAEAHVQGLAYL 244 Query: 200 IENSDTSLRGIFHMTADGG 218 +E T +F++ G Sbjct: 245 LEGGATE---VFNLGNGNG 260 >gi|42519635|ref|NP_965565.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227889421|ref|ZP_04007226.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|268320008|ref|YP_003293664.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|41583924|gb|AAS09531.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii NCC 533] gi|227849899|gb|EEJ59985.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii ATCC 33200] gi|262398383|emb|CAX67397.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii FI9785] gi|329667889|gb|AEB93837.1| UDP-glucose 4-epimerase [Lactobacillus johnsonii DPC 6026] Length = 330 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 115/329 (34%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 M+ LVIG G I ++ + + +++ + R +D + + Sbjct: 1 MRVLVIGGAGYIGSHAVRKLIEEGNDVVVLDSLYTGHRKAVDKRAKFYQGDIEDTNLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 + D +++ AAY+ V ++ +P + N G ++ +A + + ++ S+ Sbjct: 61 ILRDENIDAVMHFAAYSLVGESVKKPLKYYDNNVSGMISLLQAMEDAKVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ + I A Y Sbjct: 121 YGIPEKLPITEDTPLNPINPYGETKMMMEKIMHWADKANGIKSIALRYFNVAGASSDGSI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A ++ D + T T+ + I L Sbjct: 181 GEDHGPETHLIPNILKSAIAGDGNFTIFGDDYNTKDGTNVRDYVQVEDLIDAHILALKHV 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 DT+ +F++ G + I + + G Y A R P Sbjct: 241 MDTNKSDVFNLGTAQGYSN-----LEILEAAKKVTGIDIP--------YTIGARRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D SK + E V +++ Sbjct: 288 SLVADSSKARKVLGWKPKH--EDVDDVIA 314 >gi|119478099|ref|ZP_01618178.1| dTDP-4-rhamnose reductase-related protein [marine gamma proteobacterium HTCC2143] gi|119448805|gb|EAW30048.1| dTDP-4-rhamnose reductase-related protein [marine gamma proteobacterium HTCC2143] Length = 290 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 111/294 (37%), Gaps = 21/294 (7%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPAAY 60 MK +I GQI +L + + +I P + D+++N A Sbjct: 1 MKVQIIALKGQIRDALEAQLAIRGHYVAAPGNEISATPPANGWQISEDV--DIVVN--AL 56 Query: 61 TAVDKAEDE-PEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEFSPTN 119 T + P+ A+ + ++A+A + +P I +ST VFDG S E Sbjct: 57 TL--ECLQHRPDEAYL---DSMVSLARACEGAHVPMIQLSTGQVFDGGSSRRFKETDMVV 111 Query: 120 PLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVVCDQF 179 P + G EE + ++++ILR ++S N L ++ ++ IS+ Sbjct: 112 PASQIGAMLSRMEELLRGSCSHHIILRIGPLFSSADGNLLTELMTQFRQGDPISLSSLDN 171 Query: 180 GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAE---YIFWESAER 236 P +AR I + L ++ G +H + S FAE + + AE Sbjct: 172 SCPMHTKDLARVISAMIDQLSCGCES--WGTYHYCSSDPASS-HQFAETALAVVSQYAES 228 Query: 237 GGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILVNI 290 G + + + T RP L K+ NT I+ W+ V + I Sbjct: 229 GPRPLMLEP--SDERNTDWSRP---ILSSEKILNTFGIKQLPWRAFVVPTIKKI 277 >gi|312898930|ref|ZP_07758318.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359] gi|310620092|gb|EFQ03664.1| NAD-binding domain 4 [Megasphaera micronuciformis F0359] Length = 310 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 83/242 (34%), Gaps = 34/242 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEII-----RVGRPD----------IDLLKPKDFAS 44 MK LV G G I + M V + E++ G + D+ Sbjct: 1 MKILVTGGAGFIGSHIVDMLVDRGDEVVVIDNLSTGVKENVNDKARLLCFDIRDRDRLLQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 D + + AA T V +++ P N G ++ + A G ++ S+ V Sbjct: 61 VCEEEKFDAVFHEAAQTQVPYSQEHPYEDSDENVMGLLSVLEGARKTGVKKVVFSSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFG---- 155 + P+ E P P + YG SK+ E + Y YV+LR A VY Sbjct: 121 YGDNDNLPLKEDEPLTPTSFYGLSKVISERYLEMYYKVFGLPYVVLRYANVYGERQGVHG 180 Query: 156 -SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++++ D Q +A A N+ D GI++ Sbjct: 181 EGGVVFVFAHALTHGEDLTIYGDGEQTRDFVYVKDVA------AANVAALQDEVKPGIYN 234 Query: 213 MT 214 ++ Sbjct: 235 IS 236 >gi|184155877|ref|YP_001844217.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] gi|183227221|dbj|BAG27737.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum IFO 3956] Length = 310 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 109/314 (34%), Gaps = 55/314 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVG----------RPDI-----------DL 36 M LV G G I + ++ + D+ D+ Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + + DV++N AA + VD++ ++P S N G + A + + Sbjct: 61 RDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRARVRLV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 +STD V+ ++ DE +P P + Y +K + + + + + VI R+A Y Sbjct: 121 QVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYG 180 Query: 153 I--FGSNFLLSMLRLAKERREISV--VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + ++ A+++R +++ D + +AI + +E Sbjct: 181 PNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRKGVEGE----- 235 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLD 264 ++++ E + A G P S+V + A R Y+ D Sbjct: 236 -VYNIGGFERRT----VLEVVASLQALLGFPDSQVVHV--------AERLGHDHRYAV-D 281 Query: 265 CSKLANTHNIRIST 278 +KL R ST Sbjct: 282 DTKLRRALGWRPST 295 >gi|154685647|ref|YP_001420808.1| GalE1 [Bacillus amyloliquefaciens FZB42] gi|154351498|gb|ABS73577.1| GalE1 [Bacillus amyloliquefaciens FZB42] Length = 330 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 101/317 (31%), Gaps = 54/317 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDI---------------DLLKPKDFAS 44 M LV+G G I ++ + + + I V D+ S Sbjct: 1 MAILVLGGAGYIGSHAVDQLLNKGFKTIAVDHLQTGHRKAVHEKAVFYHGDIRDKPFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + +++ AA + V ++ +P F+ N G + G+ ++ S+ V Sbjct: 61 VFAKENVTGVLHFAAQSLVGESMKDPLSYFNNNVYGTQITLEVMQEFGVKHIVFSSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SI 153 + + PI E P P + YG+SKL E+ + I + Y SI Sbjct: 121 YGEPEKVPITEDMPEKPESAYGESKLMAEKMLKWCETACGIKYVSLRYFNVAGAKTDGSI 180 Query: 154 FGSNFLLSML------RLAKERREISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 + + L +R E+ + + T T I L Sbjct: 181 GEDHHPETHLIPILLQTALGQREEVLIFGTDYDTKDGTCIRDYVHVSDLIDAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 + GIF++ + G S ++ AE + + KV A RP S Sbjct: 241 QNGGDSGIFNLGSSSGF-SVSEMAEA----ARQVTERDIKVRA--------AARRPGDPS 287 Query: 262 CL--DCSKLANTHNIRI 276 L K N Sbjct: 288 TLIASSDKARNILGWNP 304 >gi|16801682|ref|NP_471950.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] gi|16415157|emb|CAC97847.1| UDP-glucose 4-epimerase [Listeria innocua Clip11262] Length = 328 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 56/316 (17%), Positives = 109/316 (34%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M +V+G G I ++ + + E++ R G + D+ ++ Sbjct: 2 MSIVVLGGAGYIGSHAVDELINRGYEVVVVDNLRTGHKESIHKKAKFYEGDIRDKAFLST 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S D +I+ AA + V ++ + P + N G + + + G+ ++ S+ Sbjct: 62 VFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVMEQFGVKHIVFSSSAAT 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PT+P + YG++KL E+ + +Y +V LR V + Sbjct: 122 YGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGMKFVALRYFNVAGAKADGSI 181 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 182 GEDHKPETHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYL 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 IF++ + G F+ E+A I + P +A P Sbjct: 242 KKGGESNIFNLGSSNG------FSVKEMLEAARIVTG----KEIPAEVVPRRAGDPGTLV 291 Query: 263 LDCSKLANTHNIRIST 278 K + + Sbjct: 292 ASSDKAREILGWQPTY 307 >gi|46908649|ref|YP_015038.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47092763|ref|ZP_00230548.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|226225025|ref|YP_002759132.1| UDP-glucose 4-epimerase [Listeria monocytogenes Clip81459] gi|254932282|ref|ZP_05265641.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|46881921|gb|AAT05215.1| UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. F2365] gi|47018851|gb|EAL09599.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. 4b H7858] gi|225877487|emb|CAS06201.1| Putative UDP-glucose 4-epimerase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583839|gb|EFF95871.1| UDP-glucose 4-epimerase [Listeria monocytogenes HPB2262] gi|328465213|gb|EGF36476.1| UDP-glucose 4-epimerase [Listeria monocytogenes 1816] gi|332312907|gb|EGJ26002.1| UDP-glucose 4-epimerase [Listeria monocytogenes str. Scott A] Length = 327 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 109/316 (34%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M +V+G G I ++ + + E++ R G + D+ +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F D +I+ AA + V ++ + P + + N G + + + G+ ++ S+ Sbjct: 61 VFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PTNP + YG++KL E+ + +Y YV LR V + Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALRYFNVAGAKADGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 181 GEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIKALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ + G F+ E+A I + P +A P Sbjct: 241 KNGGESNIFNLGSSNG------FSVKEMLEAAR----TVTGKEIPAEVVPRRAGDPGTLI 290 Query: 263 LDCSKLANTHNIRIST 278 K + Sbjct: 291 ASSDKAREILGWEPTY 306 >gi|310643727|ref|YP_003948485.1| nad dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] gi|309248677|gb|ADO58244.1| NAD dependent epimerase/dehydratase family protein [Paenibacillus polymyxa SC2] Length = 309 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 60/311 (19%), Positives = 104/311 (33%), Gaps = 62/311 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------------RPDI---DLLKPKDFAS 44 MK LV G G I L + + + R + D+ + + Sbjct: 1 MKALVTGGAGFIGSQLVRALADSGIRVHVLDNLTTGNAANVDPRAVMHIADIRSSEA-RT 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + SPD++ + AA V + P+ +N G + +A G I+ ST V Sbjct: 60 LLIRESPDIVFHLAAQADVQHSIHHPDEDADVNVLGTIHLLQACREAGVSKIIFASTSGV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + L + I E P P++ YG SKL E + + NY ILR VY + Sbjct: 120 YGELQKQCIQEDDPVEPISGYGLSKLTAESYIRLFYRLYGLNYTILRYGNVYGPGQAAKG 179 Query: 157 --NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + K+ + + D Q + RA + H + + H Sbjct: 180 EGGVVAIFMDRLKKGSPLLIHGDGTQTRDFVYVKDVVRANMAAIH-------AADQRTVH 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPY-SKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 ++ G + I + + + S V +++ A R +SCL + Sbjct: 233 VS--TGRTT------SINRLAYDLLKLHGSSVRPVYS-----PA-RTGDIHHSCLSNA-- 276 Query: 269 ANTHNIRISTW 279 W Sbjct: 277 ------VARHW 281 >gi|307748304|gb|ADN91574.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni M1] Length = 324 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 64/315 (20%), Positives = 105/315 (33%), Gaps = 53/315 (16%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + + I + R DLL Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNNYNCIVMDNLIYGHKQAIDKRAKFIHADLLDIFSLT 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 + F D +++ AA+ V ++ PE + N G + A + ++ ST Sbjct: 61 NVFKQEKIDALVHFAAFAYVGESVVNPEKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHSQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASEDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQY-PTKAHRPAYSC 262 G ++ G S + I + G + Y P +A PA Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEVVSGKKCPIN------YAPRRAGDPA--R 287 Query: 263 L--DCSKLANTHNIR 275 L D K + Sbjct: 288 LYADNKKAKEILSWE 302 >gi|161527633|ref|YP_001581459.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] gi|160338934|gb|ABX12021.1| NAD-dependent epimerase/dehydratase [Nitrosopumilus maritimus SCM1] Length = 295 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 19/210 (9%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGRPD-----------IDLLKPKDFASFFLSF 49 K LV G +G + + S D + + + + + D+ K F +F Sbjct: 6 KILVTGASGMLGNKIISELSNSDYQSLGISKKNTHTINNTIIKKCDITNYKQLKKIFDAF 65 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSR 109 P++II+ A+ T + E+ PE F +N G I G I+ S+ V+ G S+ Sbjct: 66 KPNIIIHTASITGNIECEENPEKTFLVNCLGTFNILNLMKKNGAKIIFCSSREVY-GNSK 124 Query: 110 TPIDEFSPTNPLNIYGKSKLAGE----EKVASYTNNYVILRTAWVYS-IFGSNFLLSMLR 164 + E P+N+ G +K+ E + +Y YVILR Y + + M++ Sbjct: 125 KKVTEKDLEFPINLNGITKITSENLIKKFHQTYNVQYVILRFTNFYGDLNSKRGISLMIK 184 Query: 165 LAKERREISVV-CDQFGTPTSALQIARAII 193 A + +++++ Q +AI+ Sbjct: 185 NAIKNKQVTIYGGKQILNLLHIDDAVKAIL 214 >gi|153007280|ref|YP_001381605.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] gi|152030853|gb|ABS28621.1| dTDP-glucose 4,6-dehydratase [Anaeromyxobacter sp. Fw109-5] Length = 336 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 51/318 (16%), Positives = 108/318 (33%), Gaps = 48/318 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCV---QDVEIIRVGR----------PDID-----------L 36 M LV G +G I +L + + ++ + ++D + Sbjct: 1 MNVLVTGGSGFIGANLVRLLLVERPGWRVVNLDALTYAGNAENLAELDGHARYRFVRGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPC 95 + A + D +++ AA + VD++ P + N G + +AA +G Sbjct: 61 CNGELVADVLETERIDAVLHLAAESHVDRSILSPPVFIETNVRGTQVLLEAARELGVRRF 120 Query: 96 IYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 +++STD V+ L + E +P +P + Y SK + + +Y + V+ R + Sbjct: 121 VHVSTDEVYGSLGPSGLFTEETPLDPSSPYSASKASSDLLALAYARTFELPVVVTRCSNN 180 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 Y + L L +A R++ + +G L + Sbjct: 181 YGPYQFPEKLIPLAIANALRDLPLPV--YGDGLHVRDWIHVEDHCRGLLAALEKGESGQV 238 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC---LDCSK 267 +++ A + + + G P S + + A RP + +D +K Sbjct: 239 YNLGASSE---RHNL-DVVKQVLRLVGKPESLIQHV--------ADRPGHDRRYAIDSTK 286 Query: 268 LANTHNIRIST-WKEGVR 284 ++E + Sbjct: 287 ARTVLGWAPRHRFEEALA 304 >gi|254555754|ref|YP_003062171.1| UDP-glucose 4-epimerase [Lactobacillus plantarum JDM1] gi|254044681|gb|ACT61474.1| UDP-glucose 4-epimerase [Lactobacillus plantarum JDM1] Length = 331 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I + V+ +++ V R + DL Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEHGTDVVVVDNLVTGHRAAVNSAAKFYQGDLRDADFLNH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ +P F N G + + + + ++ ST Sbjct: 61 VFDTEDIEAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLETMQAHNVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P+N YG SKL E+ + Y I A Y Sbjct: 121 YGTPKQIPIKETDPQLPINPYGASKLMMEQIMHWADVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+ + D + TP T+ I Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELKIFGDDYNTPDGTNVRDYVHVI 227 >gi|149197652|ref|ZP_01874702.1| dTDP-D-glucose 4;6-dehydratase [Lentisphaera araneosa HTCC2155] gi|149139222|gb|EDM27625.1| dTDP-D-glucose 4;6-dehydratase [Lentisphaera araneosa HTCC2155] Length = 373 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 86/264 (32%), Gaps = 55/264 (20%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLL 37 MK +V G G I ++ +++ E++ + + +D+ Sbjct: 1 MKIIVTGGAGFIGSAVIRNLIENTNDEVLNLDKLTYAGNLESLTSVENSERYHFAQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 + F +F PD+I++ AA + VD++ D P N G + + A Sbjct: 61 DREAVEKVFEAFQPDIIMHLAAESHVDRSIDGPGEFMQTNIIGTYTLLEVARKYWEALPS 120 Query: 93 -----------------IPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEE 133 +ISTD V+ L E +P P + Y SK + + Sbjct: 121 RKVTGDRDQVSESTKKAFRFHHISTDEVYGDLEGPEDLFREDTPYAPSSPYSASKASSDH 180 Query: 134 KVASYTNNY----VILRTAWVYSIFG---SNFLLSMLRLAKERR-EISVVCDQFGTPTSA 185 V ++ Y VI + Y + L L ++ + Q Sbjct: 181 LVRAWNRTYGLPVVITNCSNNYGPYHFPEKLIPLVTLNALAQKDLPVYGDGKQIRDWLYV 240 Query: 186 LQIARAIIQIAHNLIENSDTSLRG 209 ARA+ +A ++ G Sbjct: 241 DDHARALCLVAKKGSNGETYNIGG 264 >gi|284047879|ref|YP_003398218.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] gi|283952100|gb|ADB46903.1| NAD-dependent epimerase/dehydratase [Acidaminococcus fermentans DSM 20731] Length = 332 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 106/316 (33%), Gaps = 51/316 (16%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEIIRVG----------------RPDI---------D 35 K L+ G G I L+ + V++ + R ++ D Sbjct: 9 KILITGAAGFIGYHLAKRLLSLGVQVAGLDNMNAYYDVQLKKDRLARLELYPAFSFTQGD 68 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-P 94 L + F F PD+++N AA V + D P N G I +A Sbjct: 69 LADGETVNRIFEEFRPDIVVNLAAQAGVRYSIDHPREYIDSNIIGFFNILEACRHYQPEH 128 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW---- 149 ++ S+ V+ +TP + P+++Y +K + E +Y + Y I T Sbjct: 129 LLFASSSSVYGNQKKTPFATTDNVDHPISLYAATKKSDELMAYTYCHLYGIPSTGLRFFT 188 Query: 150 VYSIFGSNFLLSMLR--LAKERREISVVC--DQFGTPTSALQIARAI-IQIAHNLIENSD 204 VY FG + + I++ D + T I I + N + Sbjct: 189 VYGPFGRPDMAYFKFTNKIMKGEPITIFNQGDMYRDFTYVDDIVTGIQNMLCCPPKPNGE 248 Query: 205 TSLRGIFHMTADGGP--VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 I+++ + +++ + E ++AE+ + Y T A Sbjct: 249 GDRYKIYNIGNNHPEKLMTFIETLEKALGKTAEKEYMPMQ----PGDVYQTYA------- 297 Query: 263 LDCSKLANTHNIRIST 278 D S+L R ST Sbjct: 298 -DVSELEKDFGFRPST 312 >gi|57640939|ref|YP_183417.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] gi|57159263|dbj|BAD85193.1| UDP-glucose 4-epimerase [Thermococcus kodakarensis KOD1] Length = 308 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 104/316 (32%), Gaps = 53/316 (16%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFASFFL 47 +V G G I ++ ++D +++ G+ + D+ + A Sbjct: 7 VVVTGGAGFIGSHIAWELIKDNDVVIIDNLYTGKEENVPPGAKLVKADIRDYEAIAELIS 66 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL 107 + D + + AA +V ++ +P +N G I KA I+ S+ V+ Sbjct: 67 NA--DYVFHEAAQVSVVESIRDPVFTEEVNVLGTLNIIKALLEGHGKLIFASSAAVYGDN 124 Query: 108 SRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN-----F 158 P+ E PL+ YG +K EE + + Y V LR V+ S Sbjct: 125 PNLPLKETERPRPLSPYGVTKATAEEYLRVFHELYGLPVVSLRYFNVFGPRQSTNQYAGV 184 Query: 159 LLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + A + + + D Q + +A + +A + N A Sbjct: 185 ISIFINRALKGEPLVIFGDGKQTRDFIYVKDVVKANLLVAESRKANGRVFN------VAT 238 Query: 217 GGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLANTHN 273 G + + A I + T RP +S D S++ Sbjct: 239 GRETTILELAMKIIEITG------------TTSSVVFDKPRPGDIRHSRADISEIRKLGF 286 Query: 274 IRISTW--KEGVRNIL 287 W +EG++ + Sbjct: 287 E--PEWSLEEGLKKTV 300 >gi|319789559|ref|YP_004151192.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] gi|317114061|gb|ADU96551.1| dTDP-glucose 4,6-dehydratase [Thermovibrio ammonificans HB-1] Length = 331 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 108/316 (34%), Gaps = 41/316 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------------EIIRVGRPD-------IDLLKPK 40 MK LV G G I V+ ++ R+ + +DL Sbjct: 1 MKLLVTGGAGFIGSEFVRQAVERGYDVCVLDALTYAGDLERLHSVEGRYRFYRVDLTDRS 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIS 99 + PDV+++ AA + VD++ EP + + N G + AA G + IS Sbjct: 61 RVFNVLKEEKPDVVVHFAAESHVDRSIVEPTVFVTTNVLGTQNLLDAAVEAGVEKFVNIS 120 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI-- 153 TD V+ +++ E SP NP + Y SK A + +Y + V +R + Y Sbjct: 121 TDEVYGEIAQGRFTEESPLNPSSPYSASKAAADMLGRAYHRTFGLPVVTVRPSNNYGPWQ 180 Query: 154 FGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + + ++ A I V D G+ + +E + ++++ Sbjct: 181 YPEKLIPVVVLKALLNEPIPVYGD--GSNVREWLFVSDCARAVFAAVEKGEPGR--VYNV 236 Query: 214 TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 + + + + I + + V Y Y LD + Sbjct: 237 GSSQEKRNI-EVVKAILSILGKPESLITFVKDRPGHDY-------RY-ALDWERARRELG 287 Query: 274 IRIS-TWKEGVRNILV 288 + ++EG+ + Sbjct: 288 WEPAVKFEEGIERTVK 303 >gi|5814303|gb|AAD52171.1|AF144879_10 unknown [Leptospira interrogans] Length = 298 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 43/298 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE------------IIRVGRPD-------IDLLKPKDF 42 K LV+G +G + ++ + E + + + +D+L + Sbjct: 6 KILVLGVSGMLGNAVFRVLSDSAEFEVQGTIRSIEYLRFFTKAESERITSNMDVLNEDEL 65 Query: 43 ASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDY 102 F + PD+++N K +P IN+ ++ +G I ISTD Sbjct: 66 LRLFSNIKPDIVVNCVGIIKQQKLAKDPITVLPINSLLPHRLSNLCKLVGARLILISTDC 125 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSM 162 VF+G E + ++YG+SK GE V + +RT+ + SN+ L Sbjct: 126 VFNGQKGN-YTETDMPDAEDLYGRSKEIGE--VRD-EPHVFTVRTSIIGHELNSNYSLVD 181 Query: 163 LRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L++ E+ F + + +IA I + + L G++H+++D P+S Sbjct: 182 WFLSQNG-EVRGYKKAFFSGLPSYEIAEIIKTVII-----PNPKLYGLYHISSD--PISK 233 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 D E G +K+ +++ LD +K + + WK Sbjct: 234 FDL----LSLVGEVYGKNNKILE--SEEVIV------DRSLDSTKFRKETSYKPLPWK 279 >gi|227825049|ref|ZP_03989881.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] gi|226905548|gb|EEH91466.1| NAD-dependent epimerase/dehydratase [Acidaminococcus sp. D21] Length = 307 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 107/322 (33%), Gaps = 58/322 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG---------------RPDIDLLKPKDFAS 44 K LV G G I + C + + + + +D+ K Sbjct: 3 KILVTGGAGFIGSHILEKCSEVPGLSVTVLDNLSSGFKEYVPLSMNLVQMDVRD-KALID 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F L D +I+ AA T V + + P + IN +G + + G I+ S+ V Sbjct: 62 FLLQEKFDTVIHLAAQTLVPFSMEYPLVDADINIKGLINLLEGCRKSGVKRIIFSSSAAV 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYT----NNYVILRTAWVYSIFGSN-- 157 + P+ E P + YG SK+ E + Y + +ILR A VY Sbjct: 122 YGDNQHLPLTEKEIPAPTSFYGLSKVTAESYIRLYCLLYGMHGIILRFANVYGERQGETG 181 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQ-IAHNLIENSDTSLRGIF 211 + RL E + ++V D Q IA +++ +++ + + Sbjct: 182 EGGVISIFARLLHEHKPLTVFGDGQQTRDFIYVGDIAETMVRSLSYEGLATLN------- 234 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA----YSCLDCSK 267 + G VS + + G I + QY R S L Sbjct: 235 --VSTGCKVSL----NALLSVMEKLTGQ------IPSVQYG---PRRKGDIRDSVLSHEA 279 Query: 268 LANTHN-IRISTWKEGVRNILV 288 L + ++ ++G+ L Sbjct: 280 LQKELGPMTFTSLQDGLSRTLA 301 >gi|296111518|ref|YP_003621900.1| UDP-glucose 4-epimerase [Leuconostoc kimchii IMSNU 11154] gi|295833050|gb|ADG40931.1| UDP-glucose 4-epimerase [Leuconostoc kimchii IMSNU 11154] Length = 330 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 115/333 (34%), Gaps = 64/333 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G + +D+ + Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVEAGRDVVVVDALFTGHREAVNPAAKFYEVDIRDKAALSE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ P F N G + + + ++ ST Sbjct: 61 VFEKEAIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKVHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG+SKL E+ +A + + A Y Sbjct: 121 YGNPINIPIKETDPQNPINPYGESKLMMEKIMAWSDQSDGVKWVALRYFNVAGAAEDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + + +R I + D + TP L +A A I+ L Sbjct: 181 GEDHTPETHLVPIILQAGLGQREYIEMFGDDYQTPDGFNVRDYVHVLDLADAHIRALKYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 + D++ + G + F+ E+A + I +K P +A P Sbjct: 241 ADGHDSNQF-------NLGSAT--GFSVKEMVEAAREATGVN----IPSKIGPRRAGDPD 287 Query: 259 ---AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 A S K + + + V++I+ Sbjct: 288 ILIANS----DKARDVLGWQPKY--DNVQDIIK 314 >gi|303231086|ref|ZP_07317826.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302514217|gb|EFL56219.1| RmlD substrate binding domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 305 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 100/306 (32%), Gaps = 51/306 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RP---------DIDLLKPKDFAS 44 M+ V G G I L + ++ + R ++D+ S Sbjct: 1 MRVCVTGGAGFIGSHLVDRLIALGHTVLVIDNLSTGVREFVNPEARFVEMDVRDSN-IDS 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F F P V+ + AA T V + + P++ +N G + +AA + S+ V Sbjct: 60 IFADFKPQVVFHEAAQTMVPASMENPKMDCDVNLMGLINMLEAARKHEVEHFLMPSSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN-- 157 + L P+ E P + YG +KL E + Y + V R A VY + Sbjct: 120 YGDLDTLPLTEAMSGKPTSFYGLTKLTAEGYLRIYEQAFGLKTVCFRYANVYGPRQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + RL E + +++ D Q + A N+ + L GI++ Sbjct: 180 EGGVISIFNRLVNEDKPLTIFGDGEQTRDFVYVADVVEA------NIKAMNHPDLTGIYN 233 Query: 213 MTADGGPVSWADFAEY---IFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLA 269 ++ + S + Y I + +V I +S L K Sbjct: 234 ISTNTS-TSVNELVAYFTSISGKQIATNYEAERVGDI------------RHSRLCNEKAK 280 Query: 270 NTHNIR 275 Sbjct: 281 KDFGFE 286 >gi|319426938|gb|ADV55012.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] gi|319426992|gb|ADV55066.1| dTDP-glucose 4,6-dehydratase [Shewanella putrefaciens 200] Length = 337 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 107/338 (31%), Gaps = 59/338 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--------IIRVGRPD---------------IDLL 37 M+ L+ G G I +L M ++ E + P+ D+ Sbjct: 1 MRILITGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADSERYHFVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAAD-------- 89 F PD++++ AA + VD++ D P N G + +A Sbjct: 61 DRARLDQVLQQFQPDLVMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120 Query: 90 --SIGIPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +ISTD V+ L + E S +P + Y SK + + V ++ Y Sbjct: 121 AQQRRFRLHHISTDEVYGSLGKAGLFSETSAYDPSSPYSASKASADHLVRAWHRTYGLPI 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHN 198 VI + Y + + M+ A + + V Q +A+ +A Sbjct: 181 VITNCSNNYGPFQYPEKLIPLMVNNALLGKPLPVYGNGQQVRDWLYVDDHVKALFLVATE 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIF-----WESAERGGPYSKVYRIFTKQYPT 253 ++ G T D E + + G + + Sbjct: 241 GQLGETYNIGGSNEYTNLAVVQRICDLLEELVPTHPQSLTMSGMGFRDLIQHV------- 293 Query: 254 KAHRPAYSC---LDCSKLANTHNI-RISTWKEGVRNIL 287 A RP + +D SK+ + ++ G+R + Sbjct: 294 -ADRPGHDVRYAIDASKIQRELGWQPLESFDSGLRKTV 330 >gi|320157615|ref|YP_004189994.1| putative dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] gi|87578245|gb|ABD38627.1| dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] gi|319932927|gb|ADV87791.1| probable dTDP-4-dehydrorhamnose reductase [Vibrio vulnificus MO6-24/O] Length = 290 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 104/315 (33%), Gaps = 56/315 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRP-----------------DIDLLKPKD 41 MK L++G G + SL + + + + R +ID+ Sbjct: 1 MKLLILGATGMLGYSLFANLSEQEKITVFGTVRSLKGKENFFDSYKDQIISNIDVYDIHS 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTD 101 S PDV+IN + A INA +A D ++ STD Sbjct: 61 LESAISQVKPDVVINCIGLIKQHSISKQHIDAVKINALLPHELANLCDRFNARLVHFSTD 120 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLS 161 VF G E + ++YGKSK GE N++ LRT+ + S+ L Sbjct: 121 CVFTGEKGL-YTEDDLPDARDLYGKSKCLGE----VSYGNHLTLRTSIIGHELNSSVSLV 175 Query: 162 MLRLAKERREISVVCDQF-GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD-GGP 219 L+++ F G PT I ++ I ++ L G++H++ D Sbjct: 176 DWFLSQQGSTKGFSKAVFSGLPTCY------IAKLLAETI-LPNSELNGLYHLSVDPIDK 228 Query: 220 VSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTW 279 + + ++ + E V LD ++ + + W Sbjct: 229 YTLLNLVAKVYEKEIEINESAELVI---------------DRSLDSTRFRAATHFQPPVW 273 Query: 280 --------KEGVRNI 286 ++ VR Sbjct: 274 ADLIEYMHRDFVRRY 288 >gi|146312297|ref|YP_001177371.1| dTDP-glucose 4,6-dehydratase [Enterobacter sp. 638] gi|145319173|gb|ABP61320.1| dTDP-glucose 4,6-dehydratase [Enterobacter sp. 638] Length = 360 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 111/343 (32%), Gaps = 66/343 (19%) Query: 1 MKCLVIGNNGQIAQSLSSM--------------------CVQDVEIIRVGRP---DIDLL 37 MK LV G G I +L EI + R D+ Sbjct: 1 MKILVTGGAGFIGSALIRYIINETTDSVINVDKLTYAGNLQSLGEIDKSDRYTFVQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------ 91 + F + PD +++ AA + VD++ P N G + +AA Sbjct: 61 DAQTLERIFDTHQPDSVMHLAAESHVDRSISGPAAFIETNIVGTYVLLEAARKYWLGLQA 120 Query: 92 ----GIPCIYISTDYVFDGLSRTPIDEFS----------PTNPLNIYGKSKLAGEEKVAS 137 +ISTD V+ L E P + Y SK + + V + Sbjct: 121 EKKENFRFHHISTDEVYGDLPHPDECEDDASLPLFTEKTAYAPSSPYSASKASSDHLVRA 180 Query: 138 YTNNY----VILRTAWVYSIFG--SNFLLSMLRLAKERREISVV--CDQFGTPTSALQIA 189 + Y ++ + Y + + ++ A + + + + DQ A Sbjct: 181 WHRTYHLPVIVTNCSNNYGPYHFPEKLIPLVILNALQGKPLPIYGKGDQIRDWLYVEDHA 240 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 RA+ + +N + +T G ++ + V I E + PY K+ I Sbjct: 241 RALYAVVNNG-KVGETYNIGGYNEKKNIEVV---QTICQILDEIKPQATPYDKL--IT-- 292 Query: 250 QYPTKAHRPAYSC---LDCSKLANTHNIRI-STWKEGVRNILV 288 A RP + +D K+ + T++ G++ + Sbjct: 293 ---FVADRPGHDRRYAIDAGKITRELGWKPEETFESGIKKTVT 332 >gi|256618651|ref|ZP_05475497.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|257089481|ref|ZP_05583842.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] gi|256598178|gb|EEU17354.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256998293|gb|EEU84813.1| UDP-glucose 4-epimerase [Enterococcus faecalis CH188] Length = 329 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RP----------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V P + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHPSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|224127570|ref|XP_002320107.1| predicted protein [Populus trichocarpa] gi|222860880|gb|EEE98422.1| predicted protein [Populus trichocarpa] Length = 196 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 26/177 (14%) Query: 2 KCLVIGNNGQIAQSL----------------------SSMCVQDVEIIRVGRP-DIDLLK 38 + LV+G G + Q + S++ ++ I +DL Sbjct: 5 RVLVVGGTGYLGQHVLLSLSRIKDSAPYDLAFTYHSNSNLLEPLLDAIPHSHAFHVDLTT 64 Query: 39 PKDFASFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAG-AIAKAADSIGIPCI 96 F S F P V++N AA + E +P+ A SIN + + + I Sbjct: 65 GDGFQSIASKFGQPHVVVNCAALSVPRVCEKDPDAAMSINVPCSLVNWLSSFEERDTLLI 124 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSI 153 ++STD V++G+ + E T P+N+YGKSK+A E+ ++ NY ILR++ ++ Sbjct: 125 HLSTDQVYEGVK-SFYKEEDETVPVNVYGKSKVAAEQFISKTWPNYAILRSSIIFGP 180 >gi|321312938|ref|YP_004205225.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5] gi|320019212|gb|ADV94198.1| hypothetical protein BSn5_07860 [Bacillus subtilis BSn5] Length = 309 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 27/248 (10%) Query: 1 MK-CLVIGNNGQIAQSLSSMC-VQDVEIIRVG--RPDI-------DLLKPKDFASFFLSF 49 MK ++G G I L+ + + I +PD ++L + Sbjct: 1 MKHIAILGGAGFIGSELAGLLQKKGYHTIIADQKKPDFQAEFRQTNILDRQSLRESLKGA 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDGLS 108 D +++ AA VD E +N EG + + +GI ++ S+ VF Sbjct: 61 --DAVVHLAAMVGVDSCRSNEEDVIKVNFEGTKNVTEVCKELGIKTLLFSSSSEVFGDSP 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSML 163 P E S P + YGK+KL EE + + + +R ++++G + Sbjct: 119 DYPYTESSQKLPKSAYGKAKLKSEEYLKEQASASLHVRVVRYFNVYGPKQRQDFVINKFF 178 Query: 164 RLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVS 221 LA+ E+ + D Q + I L + S I + P+S Sbjct: 179 SLAEAGAELPLYGDGGQIRCFSYISDIVNGTY--LALLHKGSAYEDFNI----GNDLPIS 232 Query: 222 WADFAEYI 229 AE I Sbjct: 233 IKGLAEKI 240 >gi|260576535|ref|ZP_05844524.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] gi|259021258|gb|EEW24565.1| dTDP-glucose 4,6-dehydratase [Rhodobacter sp. SW2] Length = 346 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 114/331 (34%), Gaps = 56/331 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + + +I + D+ Sbjct: 1 MKILVTGGAGFIGSAVVRLAVARGHAVINLDALTYAACLDNVASVAGSNLYSFEQADIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------- 91 + F PD +++ AA + VD++ D P S N G + +AA + Sbjct: 61 RAALDAVFARHRPDAVMHLAAESHVDRSIDGPGDFISTNITGTYTLLEAARAFWTAAGRP 120 Query: 92 -GIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 G +ISTD VF L T E +P P + Y SK A + V +++ Y V+ Sbjct: 121 AGFRFHHISTDEVFGTLGPTGQFTEDTPYAPNSPYAASKAASDHLVRAWSETYGLPVVLT 180 Query: 146 RTAWVYSIFGSNFLLSML----RLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE 201 + Y F L + LA + + + A A++ + Sbjct: 181 NCSNNYGPFHFPEKLIPVVILNALAGKPIPVYGRGENVRDWLFVEDHADALLCVLERGAL 240 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--- 258 ++ G + + + E G P+ ++ R T RP Sbjct: 241 GRSYNIGG----ENEARNIDLVRMICSLLDEMHPAGAPHDRLIRFVTD-------RPGHD 289 Query: 259 -AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D S++ N R S T ++G+R + Sbjct: 290 ARYAI-DPSRIRNELGWRPSVTLEQGLRRTV 319 >gi|325954256|ref|YP_004237916.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] gi|323436874|gb|ADX67338.1| dTDP-glucose 4,6-dehydratase [Weeksella virosa DSM 16922] Length = 348 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 60/330 (18%), Positives = 115/330 (34%), Gaps = 57/330 (17%) Query: 3 CLVIGNNGQIAQSLSSMCVQ---DVEIIRVGR---------------------PDIDLLK 38 + G G I + +Q + I+ + +D++ Sbjct: 4 IFITGGAGFIGSHVVREFLQKHPNYTIVNIDALTYAGNLENLKDVEHHPNYRFEKVDIVD 63 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------G 92 K + F + PD +I+ AA + VD++ P N G + AA + G Sbjct: 64 AKAVNALFERYQPDGVIHLAAESHVDRSISNPIDFVMTNVIGTVNLLNAAKATWQNDYSG 123 Query: 93 IPCIYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 ++STD V+ L T E + +P + Y SK + + V +Y + Y VI Sbjct: 124 KRFHHVSTDEVYGTLGETGYFTEETSYDPHSPYSASKASSDHFVRAYHDTYGLPIVITNC 183 Query: 148 AWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS 203 + Y F + + ++ + + D T + A+AI + H Sbjct: 184 SNNYGPNHFPEKLIPLCIHNILNKKPLPIYGDGKYTRDWLYVIDHAKAIDLVFHEGKTGK 243 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RP---- 258 ++ G T D + + + E+ G +++ T RP Sbjct: 244 AYNIGGFNEWTNI-------DLVKELCRQMDEKLGREKG----ESEKLITFVKDRPGHDL 292 Query: 259 AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D +K+ + S T++EG+ + Sbjct: 293 RYAI-DATKINKELGWKPSVTFEEGLSATI 321 >gi|149052292|gb|EDM04109.1| rCG33311, isoform CRA_a [Rattus norvegicus] Length = 144 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----RP---DIDLLKPKDFASFFLSFSPDV 53 + L+ G G + +++ Q + + G RP ++LL + F P V Sbjct: 19 RVLITGATGLLGRAVYKEFQQSNWHAVGCGFRRARPKFEQVNLLDSEAVHHLIHDFQPHV 78 Query: 54 IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPID 113 I++ AA D E +P+ A +N +G +AK A +IG IYIS+DYVFDG P Sbjct: 79 IVHCAAERRPDVVESQPDAASQLNVGASGNLAKEAAAIGAFLIYISSDYVFDGT-NPPYT 137 Query: 114 EFSPTN 119 E N Sbjct: 138 EEDIPN 143 >gi|256763403|ref|ZP_05503983.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|256684654|gb|EEU24349.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] Length = 330 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + +I V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVIVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|121533488|ref|ZP_01665316.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] gi|121308047|gb|EAX48961.1| NAD-dependent epimerase/dehydratase [Thermosinus carboxydivorans Nor1] Length = 307 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 109/319 (34%), Gaps = 56/319 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEI-----IRVGRPD----------IDLLKPKDFAS 44 MK LV G G I + + + ++ + GR + +D+ P Sbjct: 1 MKILVTGGAGFIGSHTVDKLIHEGCQVTVVDDLSTGRRENVNAQATFIEMDVCSP-VLFE 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYI-STDYV 103 F + D +++ AA T+V + D+P+ +N G + + G+ + + S+ V Sbjct: 60 LFANVKFDGVVHLAAQTSVPVSMDKPDFDCRVNVLGTVNVLEVCRRFGVRRVVLASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSN-- 157 + P+ E + P ++YG SKL E ++ YT + V+LR A VY + Sbjct: 120 YGDGVAVPVREDAKMAPASVYGLSKLTAETYLSMYTRLFGLEGVVLRYANVYGERQGDGG 179 Query: 158 ---FLLSMLRLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++V D + T A +A A N + + G+F+ Sbjct: 180 EGGVVSIFTSRMARGEALTVYGDGYQTRDFVYAGDVANA------NWLALITPDVNGVFN 233 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-----SCLDCSK 267 + S D + G + P + S LD Sbjct: 234 V-GTASETSVNDL----IQLLTDVAGRTVDIQYCT----------PRHGDIYRSALDNRL 278 Query: 268 LANTHNIRIS-TWKEGVRN 285 + +EG+ Sbjct: 279 AREKLCWQPQIPLREGLAR 297 >gi|327534703|gb|AEA93537.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 329 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRAAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|325971635|ref|YP_004247826.1| UDP-glucuronate 4-epimerase [Spirochaeta sp. Buddy] gi|324026873|gb|ADY13632.1| UDP-glucuronate 4-epimerase [Spirochaeta sp. Buddy] Length = 334 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 83/249 (33%), Gaps = 36/249 (14%) Query: 4 LVIGNNGQIAQSL-SSMCVQDVEIIRVG----------RPD--------------IDLLK 38 LV G G I L + Q +I + + DL Sbjct: 15 LVTGAAGFIGFHLTQRLLSQGCSVIGFDNLNDYYEVSLKEERLRLLACDNFYFYKADLAD 74 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIY 97 K F + D +IN AA V + D P N G I +A + +Y Sbjct: 75 KKALDDIFEQHAIDYVINLAAQAGVRYSIDNPYAYLQSNLVGFLNILEACRHHTVKHLVY 134 Query: 98 ISTDYVFDGLSRTPIDEFSPTN-PLNIYGKSKLAGEEKVASYTNNYVILRTAW----VYS 152 S+ V+ S+ P + P+++Y +K + E +YT+ Y I T VY Sbjct: 135 ASSSSVYGLNSKIPYSTTDQVDHPVSLYAATKKSNELMAHAYTHLYQIPSTGLRFFTVYG 194 Query: 153 IFGSNFLLSMLRL----AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIE-NSDTSL 207 +G + + ++ D + T I AI +I N E N Sbjct: 195 PYGRPDMAYFSFAKRIMEGKGIKVYNNGDMWRDFTYVDDIIAAIERIIPNPPEPNEAKDR 254 Query: 208 RGIFHMTAD 216 I+++ + Sbjct: 255 YKIYNIGNN 263 >gi|257869587|ref|ZP_05649240.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] gi|257803751|gb|EEV32573.1| UDP-glucose 4-epimerase [Enterococcus gallinarum EG2] Length = 329 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 106/316 (33%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I ++ + + + + V P+ D+ S Sbjct: 1 MAILVLGGAGYIGSHAVDQLITKGYQAVVVDNLLTGHRQAIHPEAVFYEGDIRDKAFLQS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA + V ++ ++P F+ N G + + ++ ST Sbjct: 61 VFEKETIDGLIHFAASSLVGESVEKPLKYFNNNVYGMQVLLEVMKDNNVDHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + ++PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPEQSPITEETPTNPKNPYGESKLMMEKMMRWCDEAYGMKYVALRYFNVAGAKSDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 +R+E+++ D + TP T L Sbjct: 181 GEDHDPETHLVPLILQVALGQRQELAIFGDDYDTPDGTCIRDYVHVEDLCNAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + +F++ ++ G E + ++ I K P +A P Sbjct: 241 KKGNPSNVFNLGSNNGYS---------VKEMLDAARTVTQ-KDIPAKVAPRRAGDPGTLV 290 Query: 263 LDCSKLANTHNIRIST 278 K S Sbjct: 291 ASSDKAKAVLGWEPSY 306 >gi|315147015|gb|EFT91031.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4244] Length = 319 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|312127797|ref|YP_003992671.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] gi|311777816|gb|ADQ07302.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor hydrothermalis 108] Length = 305 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 103/307 (33%), Gaps = 53/307 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFAS 44 M LV G G I + ++ ++ V +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIEKGYDVCIVDNLLSGNVCNINPKAKFYQLDIRD--NLEK 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ + + SIN G + I S+ V Sbjct: 59 VFEENKIEYCIHQAAQVSVAKSMKDAYLDCSINVLGTVNLLDYCVKYKVKKFILASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNF- 158 + PIDE P P + YG SKL EE + + +N Y+I R + VY F Sbjct: 119 YGEPKYIPIDENHPLRPESFYGLSKLTSEEYIKMFAHNFNFEYIIFRYSNVYGPRQDPFG 178 Query: 159 ----LLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + +++ + D Q +A A ++S+ G F+ Sbjct: 179 EGGVVSIFCERMQGSKDVIIFGDGTQTRDFIYVEDVAEANCIAL-------ESSVSGTFN 231 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 ++ G VS +F + G ++ RP A+SCL + L Sbjct: 232 LS-TGKNVS----VNELFEILSGLTGYKRS--PVYQS------KRPGDIAHSCLSNNLLK 278 Query: 270 NTHNIRI 276 + Sbjct: 279 SVLGFSP 285 >gi|77862409|gb|ABB04477.1| UDP-2-acetamido-2,6-dideoxy-L-lyxo-4-hexulose reductase [Yersinia kristensenii] Length = 290 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 106/308 (34%), Gaps = 51/308 (16%) Query: 4 LVIGNNGQIAQSLSSMCVQ--DVEIIRVGRPD-----------------IDLLKPKDFAS 44 +++G G + SL + + + +I R +D + Sbjct: 1 MILGATGMLGYSLFANLNEYKQLNVIGTARSTAGKEIYFNKLQENLLLNVDATDIDSIDN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 PDV+IN + + A IN+ +A D I+ STD VF Sbjct: 61 AIKLAKPDVVINCIGLIKQHEIAKQYVPAIKINSLLPHQLAALCDKYEARYIHFSTDCVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG + +E N +IYGKSK GE ++ LRT+ + S L Sbjct: 121 DGKTGL-YNELDLPNSTDIYGKSKYLGE----VNYGRHLTLRTSIIGHELSSAVSLIDWF 175 Query: 165 LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD-GGPVS 221 L K++ E++ + PTS I ++ I D SL G++H++ D S Sbjct: 176 L-KQQNEVNGFSKAIFSGLPTSY------IAKLLAEKI-LVDNSLTGLYHLSVDPIDKFS 227 Query: 222 WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWKE 281 I+ S + V LD KL + N W+E Sbjct: 228 LISLVSEIYGHSVKINKSEQLVI---------------DRSLDSKKLRDAINFNPPKWRE 272 Query: 282 GVRNILVN 289 + + N Sbjct: 273 -LIEFMHN 279 >gi|126178137|ref|YP_001046102.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] gi|125860931|gb|ABN56120.1| dTDP-glucose 4,6-dehydratase [Methanoculleus marisnigri JR1] Length = 320 Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 60/323 (18%), Positives = 108/323 (33%), Gaps = 52/323 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---------IIRVGRPD---------------IDL 36 M+ LV G G I + +++ I G P+ D+ Sbjct: 1 MRILVTGGLGFIGSNFIRQMLEEHPGDSIVNLDKITYAGNPENLKDIAGDPRYTFVRGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PC 95 P S F D +++ AA + VD++ ++ + N G + +AA S G+ Sbjct: 61 CDPGVVGSVFREHPIDAVVHFAAESHVDRSIEDASVFVRTNVLGTHVLLEAALSHGVGRF 120 Query: 96 IYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVY 151 I++STD V+ + E NP + Y SK A + SY + ++ R + Sbjct: 121 IHVSTDEVYGSIKSGSFRETDNLNPSSPYSASKAASDLLARSYYITHNLPVIVTRCTNNF 180 Query: 152 SIFGSNFLLSMLRL--AKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + L L E +++ V +GT + Sbjct: 181 GPYQYPEKLIPLFATNLLEGKKVPV----YGTGKNVRDWIHVADHCRAVDFVLRHGEPGE 236 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK---QYPTKAHRPAYSCLDCS 266 ++++ D S + E I G S V + + + YS LD S Sbjct: 237 VYNIGGDN-EKSNLEITEGILR---AVGKDESMVEYVPDRLGHDW-------RYS-LDSS 284 Query: 267 KLANTHNIRIS-TWKEGVRNILV 288 KL + ++ +R + Sbjct: 285 KLRAM-GWKPEFDFETALRATVQ 306 >gi|312900800|ref|ZP_07760095.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] gi|311292085|gb|EFQ70641.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0470] Length = 320 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|254478401|ref|ZP_05091779.1| UDP-glucose 4-epimerase [Carboxydibrachium pacificum DSM 12653] gi|214035659|gb|EEB76355.1| UDP-glucose 4-epimerase [Carboxydibrachium pacificum DSM 12653] Length = 329 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 109/328 (33%), Gaps = 55/328 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD---------IDLLKPKDFASF 45 M LV G G I ++ ++ ++ E++ G + DL Sbjct: 1 MAILVCGGAGYIGSHAVYALLKRNEEVVVVDNLATGHSESVLGGKLYIGDLRDEDFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + + +++ AA + V ++ + P + N G ++ KA G ++ ST V+ Sbjct: 61 FSENNIEAVMHFAASSLVGESVENPFKYYENNVCGTLSLLKAMKKHGVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI+E T P N YG++KLA E+ + Y I A Y Sbjct: 121 GEPERIPIEEEDRTEPTNPYGETKLAIEKMLKWADAAYGIKYVALRYFNVAGALETGEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQF----GTPTSALQIARAIIQI-AHNLIENS 203 S + + +R ++ + D + GTP ++ L + Sbjct: 181 EDHSPETHLIPIILQVALGKRDKVMIYGDDYPTKDGTPIRDYIHVMDLVDAHILALEKLR 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SC 262 + ++++ G + + + + G + I + RP + Sbjct: 241 KENKSEVYNLGNGEGFT-----VKEVIEVARKVTG-----HPIPAE---VTGRRPGDPAV 287 Query: 263 L--DCSKLANTHNIRISTWKEGVRNILV 288 L K R + I+ Sbjct: 288 LVASSEKAMKDLGWRPKY--ASLEEIIK 313 >gi|307286875|ref|ZP_07566957.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] gi|306502090|gb|EFM71376.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0109] Length = 310 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 112/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + ++ ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKEYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 IFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|29375648|ref|NP_814802.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257418903|ref|ZP_05595897.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] gi|29343109|gb|AAO80872.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|257160731|gb|EEU90691.1| UDP-glucose 4-epimerase [Enterococcus faecalis T11] Length = 329 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|307278669|ref|ZP_07559738.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] gi|306504653|gb|EFM73854.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0860] Length = 320 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIA---RAIIQIAHNLIEN 202 +R E+S+ D + TP T I L Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + S +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGSESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|195953909|ref|YP_002122199.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933521|gb|ACG58221.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 336 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 108/325 (33%), Gaps = 52/325 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVGR-------------------------PDI 34 MK LV G G I V+ EI+ V + Sbjct: 1 MKLLVTGGAGFIGSEFVREGVRIGYEIVVVDKLTYAGDLERLKGVENNTSLSRFITFYKA 60 Query: 35 DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-I 93 D+ + F + P V+++ AA + VD++ + N EG + A IG Sbjct: 61 DITNKEFIEHIFKTEKPKVVVHFAAESHVDRSILDASPFIKTNVEGTQVLLDVAKDIGVD 120 Query: 94 PCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTA 148 I I+TD V+ L + E SP P + Y SK A + +Y Y + +R + Sbjct: 121 KFINIATDEVYGELGQEGTFKEDSPLVPNSPYSSSKAAADMLGRAYYKTYKLPVITVRPS 180 Query: 149 WVYSIFGSNFLLSMLRLAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSD 204 Y + L + + K E+ + A AI +I Sbjct: 181 NNYGPWQYPEKLIPVVILKALNNEKIPVYGTGQNVREWLYVSDCAEAIFEIMEKGKIGE- 239 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 I+++ ++ + D + I + V + YS LD Sbjct: 240 -----IYNVGSNQERRNI-DVVKTILKLLHKNEDLIEFVKDRPGHDF-------RYS-LD 285 Query: 265 CSKLANTHNIRI-STWKEGVRNILV 288 +K+ N +T++EG+ + Sbjct: 286 TTKIKNELGWEAKTTFEEGIEKTVK 310 >gi|256852723|ref|ZP_05558093.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|256711182|gb|EEU26220.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] Length = 329 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|167412347|gb|ABZ79809.1| putative sugar epimerase [Campylobacter jejuni] Length = 212 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 18/169 (10%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + + I + R DLL Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNNYNCIVIDNLIYGHKQAIDKRAKFIHADLLDTFSLT 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 SVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRY 169 >gi|256762081|ref|ZP_05502661.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300860063|ref|ZP_07106151.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256683332|gb|EEU23027.1| UDP-glucose 4-epimerase [Enterococcus faecalis T3] gi|300850881|gb|EFK78630.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 329 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|257087746|ref|ZP_05582107.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256995776|gb|EEU83078.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|323481704|gb|ADX81143.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] gi|327535995|gb|AEA94829.1| UDP-glucose 4-epimerase [Enterococcus faecalis OG1RF] Length = 330 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|315151697|gb|EFT95713.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0012] Length = 320 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 112/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVVLGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|73989418|ref|XP_542640.2| PREDICTED: similar to dTDP-D-glucose 4,6-dehydratase [Canis familiaris] Length = 514 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 71/328 (21%), Positives = 110/328 (33%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+D II + + D D+ Sbjct: 178 RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 237 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 F + D++++ AA T VD + +N G + AA ++ I Sbjct: 238 NSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 297 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 298 YVSTDEVYGGSLDKEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSSNVYG 357 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + Sbjct: 358 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGE----- 412 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSK------VYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V T YP K Sbjct: 413 -IYNIGTNF-EMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMK------ 464 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 465 ----SEKIQG-LGWRPKVPWKEGIKKTI 487 >gi|29377255|ref|NP_816409.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] gi|29344721|gb|AAO82479.1| UDP-glucose 4-epimerase [Enterococcus faecalis V583] Length = 330 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + +I V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVIVVDNLLTGYRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|312134989|ref|YP_004002327.1| nad-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] gi|311775040|gb|ADQ04527.1| NAD-dependent epimerase/dehydratase [Caldicellulosiruptor owensensis OL] Length = 305 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 113/321 (35%), Gaps = 58/321 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG-------RP--------DIDLLKPKDFAS 44 M LV G G I + ++ ++ + R +D+ + Sbjct: 1 MAVLVTGGAGFIGSHIVDKLIERGYDVCIIDNLISGNVRNINPKAKFYKLDIRN--NLEE 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + I+ AA +V K+ ++ + SIN G + + I+ S+ V Sbjct: 59 VFEKNEIEYCIHQAAQVSVAKSMEDVYLDCSINVLGTVNLLEYCVKYKVKKFIFASSAAV 118 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN----YVILRTAWVYSIFGSNFL 159 + PIDE P P + YG SKL EE + + +N YVI R + VY F Sbjct: 119 YGEPKYIPIDENHPLRPESFYGLSKLTSEEYIRMFAHNFNFGYVIFRYSNVYGPRQDPF- 177 Query: 160 LSMLRLAKERREISVVCDQ---------FGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 E +S+ CD+ FG T + +A ++ + G Sbjct: 178 -------GEGGVVSIFCDRMQNNKDVIIFGDGTQTRDFIY-VEDVAEANCIALESFVSGT 229 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSK 267 F+++ G VS +F + G K ++ RP +SCL + Sbjct: 230 FNLS-TGKNVS----VNELFEILSSLTGY--KNNPVY-----QP-KRPGDIVHSCLANNL 276 Query: 268 LANTHNIRIS-TWKEGVRNIL 287 L + EG++ + Sbjct: 277 LKMEFGYVPQYSLLEGLKRTV 297 >gi|33637043|gb|AAQ23681.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus] Length = 337 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 109/326 (33%), Gaps = 56/326 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI------------------------DL 36 M LV G G I + ++ +V D+ D+ Sbjct: 1 MNLLVTGGAGFIGSNFVRYMLEKYPNYKVVNYDLLTYAGNLENLKDVENHPNYTFVKGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADS-IGIPC 95 + + DVI+N AA + VD++ +P+I N G A+ A + Sbjct: 61 NNRELVDYLVKTHEIDVIVNFAAESHVDRSITDPDIFVKTNVLGTQALLDVAKANHIKKY 120 Query: 96 IYISTDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 + ISTD V+ L T E +P P + Y SK G+ V +Y Y I R + Sbjct: 121 VQISTDEVYGTLGETGYFTEETPLAPNSPYSASKAGGDLLVRAYHETYGLNVNITRCSNN 180 Query: 151 YSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTS 206 Y + + M+ A E +E+ + D AI + H + Sbjct: 181 YGPYHFPEKLIPLMITNALEGKELPIYGDGQNIRDWLHVKDHCAAIDLVIHKGRPGEVYN 240 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC---L 263 + G T + E + + G + + A RP + + Sbjct: 241 IGGHNERTNN----------EIVHLIVEKLGVSKDLIKYV--------ADRPGHDRRYAI 282 Query: 264 DCSKLANTHNIRIS-TWKEGVRNILV 288 D +K+ + T+++G+ + Sbjct: 283 DPTKIMTELGWKPQYTFEKGIAETIQ 308 >gi|237741020|ref|ZP_04571501.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] gi|229431064|gb|EEO41276.1| UDP-glucose 4-epimerase [Fusobacterium sp. 4_1_13] Length = 329 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 110/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------RPDI-DLLKPKDFAS 44 M LV G G I + + ++ +++ V ++ DL + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDEKAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y + S + Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 ++R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALEQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 D IF++ G + + + + G + I + P +A PA Sbjct: 241 RDGGDSQIFNLGNGEGFS-----VKEVIEVTRKVTG-----HPIPAEVSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K N + Sbjct: 289 LIASSKKAINVLKWKP 304 >gi|157694215|ref|YP_001488677.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] gi|157682973|gb|ABV64117.1| UDP-glucose 4-epimerase [Bacillus pumilus SAFR-032] Length = 330 Score = 128 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 40/257 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RPDI----------DLLKPKDFAS 44 M LV G G I +++++ + ++ V + DL Sbjct: 1 MTILVCGGAGYIGSHAVAALLAKGERVVVVDNLQTGHKEAVLEGAVLEKGDLRDHAFLRQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA + V ++ +P + N GA A+ + + + ++ ST Sbjct: 61 VFKTHQIEAVMHFAADSLVGESVTDPLKYYDNNVGGATALLQVMNEFDVKHIVFSSTAAA 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E TNP N YG++KLA E+ + +Y YV+LR V + Sbjct: 121 YGEPKRVPIVETDETNPTNPYGETKLAIEKMLKWSEEAYGIEYVVLRYFNVAGAHTEGLV 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + +R +I + D + T T + + I D Sbjct: 181 GEDHQPETHLIPIILQVALGKRDQIMIYGDDYETEDGTCIRDYIHVM-DLVEAHILAVDR 239 Query: 206 SLRG----IFHMTADGG 218 G +++ G Sbjct: 240 LRAGKGSATYNLGNGTG 256 >gi|329577490|gb|EGG58932.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX1467] Length = 320 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 110/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKRIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|229008630|ref|ZP_04166042.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] gi|228752635|gb|EEM02251.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock1-4] Length = 304 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 111/320 (34%), Gaps = 55/320 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 MK LV G G I + +++ V+ + G D+ P Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDPN-IDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PIDE NP++ YG SKL E + Y Y ILR + VY + Sbjct: 120 YGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVYGARQNPD- 178 Query: 160 LSMLRLAKERREISVVCDQFG---TPTSALQIAR-----AIIQIAHNLIENSDTSLRGIF 211 E IS+ D+ +P + + +AH + I Sbjct: 179 -------GEAGVISIFMDRLFKNDSPIVYGDGNQTRDFIFVKDVAHANFLAFRNADNQIC 231 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKL 268 +++++ +S + + I RI+ ++ RP +S L K Sbjct: 232 NISSNQ-QISVNELLDTICNLMKIED------KRIYKEE------RPGDVIHSYLSNDKA 278 Query: 269 ANTHNIRIS-TWKEGVRNIL 287 N + +G+R + Sbjct: 279 RKYLNWHPKFSLLQGLRETI 298 >gi|256616718|ref|ZP_05473564.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] gi|256596245|gb|EEU15421.1| UDP-glucose 4-epimerase [Enterococcus faecalis ATCC 4200] Length = 330 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + +I V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVIVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYEMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|237737956|ref|ZP_04568437.1| UDP-glucose 4-epimerase [Fusobacterium mortiferum ATCC 9817] gi|229419836|gb|EEO34883.1| UDP-glucose 4-epimerase [Fusobacterium mortiferum ATCC 9817] Length = 329 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 71/325 (21%), Positives = 110/325 (33%), Gaps = 64/325 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI----------DLLKPKDFAS 44 M LV G G I ++ + E + V G D DL + Sbjct: 1 MAVLVCGGAGYIGSHVTRALIDSGEEVVVLDNLITGHVDAVHEKAKLVLGDLRDEEFLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + +I+ AA++ V ++ EP F N G + KA + ++ ST Sbjct: 61 VFTDNKIEGVIDFAAFSLVGESMTEPLKYFENNFYGTLCLLKAMRKHNVKNIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ + Y I TA Y + + Sbjct: 121 YGEPENIPILETDRTFPTNPYGESKLAVEKMMKWCDVAYGIKFTALRYFNVAGAHPTGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 +R I + D + TP + +A A I L Sbjct: 181 GEDHNPESHLIPIILQVALGKRESIGIYGDDYPTPDGTCIRDYIHVMDLADAHILALKRL 240 Query: 200 IENSDTSLRGIFHMTADGG-------PVSWADFAEYI-FWESAERGGPYSKVYRIFTKQY 251 +++ IF++ G V+ I S R G +K+ + T + Sbjct: 241 YNGGESA---IFNLGNGEGFSVKEVIEVTRKVTGHPIPAVVSPRRAGDPAKL--VATSE- 294 Query: 252 PTKAHR-----PAYSCLDCSKLANT 271 KA R P Y+ L K+ T Sbjct: 295 --KAMRELNWKPKYNSL--EKIIET 315 >gi|254557939|ref|YP_003064356.1| UDP-glucose 4-epimerase [Lactobacillus plantarum JDM1] gi|254046866|gb|ACT63659.1| UDP-glucose 4-epimerase [Lactobacillus plantarum JDM1] Length = 334 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 111/329 (33%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ + Sbjct: 1 MAVLVLGGAGYIGSHAVDRLVAKGYDVAVVDNLVTGHRAAVNEHARFYEGDVRDTAFMNT 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + + +I+ AA++ V ++ +P F N G + + ++ ST Sbjct: 61 VFDQENIEGVIHFAAFSVVPESMKDPLKYFDNNTAGMVKLLEVMAKHDVKKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P N YG+SKLA E+ + Y I A Y Sbjct: 121 YGEPKQVPIKESDPQVPTNPYGESKLAMEKIMHWSDVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + + A ER ++ + D + TP T+ ++ +A I + Sbjct: 181 GEDHAPETHLVPIILQVAAGERDQLQIFGDDYPTPDGTNVRDYVH-VVDLADAHILALEY 239 Query: 206 SLRGI----FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +G F++ + G F+ ++A I P +A P S Sbjct: 240 LKQGHDSDAFNLGSSTG------FSNKQMLDAAREVTG----KPIPAVMAPRRAGDP--S 287 Query: 262 CL--DCSKLANTHNIRISTWKEGVRNILV 288 L K + V+ I+ Sbjct: 288 TLVAASDKARTVLGWTPQY--DDVKEIIK 314 >gi|227878985|ref|ZP_03996885.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256849690|ref|ZP_05555121.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|262046739|ref|ZP_06019700.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] gi|227861423|gb|EEJ69042.1| UDP-glucose 4-epimerase [Lactobacillus crispatus JV-V01] gi|256713179|gb|EEU28169.1| UDP-galactose 4-epimerase [Lactobacillus crispatus MV-1A-US] gi|260573188|gb|EEX29747.1| UDP-glucose 4-epimerase [Lactobacillus crispatus MV-3A-US] Length = 330 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 118/329 (35%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LV+G G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P +P+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLDPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGAASDGTI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A + ++ CD + T T+ + I L Sbjct: 181 GEDHAPETHLIPNILKSAISGDGKFTIFCDDYDTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 +T+ +F++ G + I + + G Y R P Sbjct: 241 METNKSDVFNLGTAQGYSN-----LEILNAAKKVTGIDIP--------YTMGPRRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 288 SLVADSTKARTILGWKPKH--ESVDDVIA 314 >gi|184154772|ref|YP_001843112.1| UDP-glucose 4-epimerase [Lactobacillus fermentum IFO 3956] gi|227514045|ref|ZP_03944094.1| UDP-glucose 4-epimerase [Lactobacillus fermentum ATCC 14931] gi|260663199|ref|ZP_05864091.1| UDP-glucose 4-epimerase [Lactobacillus fermentum 28-3-CHN] gi|183226116|dbj|BAG26632.1| UDP-glucose 4-epimerase [Lactobacillus fermentum IFO 3956] gi|227087594|gb|EEI22906.1| UDP-glucose 4-epimerase [Lactobacillus fermentum ATCC 14931] gi|260552391|gb|EEX25442.1| UDP-glucose 4-epimerase [Lactobacillus fermentum 28-3-CHN] gi|299782864|gb|ADJ40862.1| UDP-glucose 4-epimerase [Lactobacillus fermentum CECT 5716] Length = 331 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 59/314 (18%), Positives = 96/314 (30%), Gaps = 48/314 (15%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 M LV G G I + + E++ R +D + Sbjct: 1 MAILVAGGAGYIGSHMVKDLLANGEEVVVADNLSTGHRKAVDPRAKFYIGDIRDRAFLDQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F++ +++ AA++ V ++ EP F N G + +A + I + ST Sbjct: 61 IFINEDIKAVVHFAAFSIVPESMSEPLKYFDNNTGGMITLLEAMRDFKVKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P P+N YG SKL E +A + Y + A Y Sbjct: 121 YGVPEHMPIKETDPQKPINPYGLSKLMMEHMMAWADSAYGVKFVALRYFNVAGAAPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + M +R E+S+ D + TP T+ + +L+ Sbjct: 181 GEDHGPETHLVPIIMQVAQGKRAELSIFGDDYNTPDGTNVRDYVHVMDLADAHLLALKYL 240 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP--AYS-C 262 + G F+ E+A I K P RP S Sbjct: 241 FAGNESNAFNLGSST---GFSNKQMLEAAREVTG----KPIPAKMAP---RRPGDPDSLV 290 Query: 263 LDCSKLANTHNIRI 276 K N + Sbjct: 291 AASDKARNVLGWKP 304 >gi|327537503|gb|EGF24225.1| UDP-glucose 4-epimerase [Rhodopirellula baltica WH47] Length = 328 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 100/281 (35%), Gaps = 44/281 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 MK V+G G I +++ + +++ + DL S Sbjct: 1 MKVFVVGGAGYIGSHAVALLLDAGHDVVVFDNLSRGHAKSVPEGLLVEGDLNDQAKLTSL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 S D +++ AA+ V ++ +P I + N ++ +A + ++ ST + Sbjct: 61 LKEHSIDAVMHFAAFAEVGESVRDPAIYYQNNVVATLSLLEAMRAADVKKIVFSSTTATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------S 152 PI E +P NP+N YG SKL E+ +A Y + Y A Y Sbjct: 121 GQPDTVPIPETTPQNPINPYGFSKLVIEKALADYAHAYGFAYAALRYFNAAGARPDGTIG 180 Query: 153 IFG---SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-----AHNLIENS 203 S+ + +L++A +R IS+ D + PT R I + AH + Sbjct: 181 EHHDPESHLIPIVLQVALGQRESISIFGDDY--PTPDGTCIRDYIHVDDLGDAHLRALDR 238 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWES-AERGGPYSKV 243 GI G S I A G P +V Sbjct: 239 LKPGEGIQVNLGTGRGTS----VREIVDACRAVTGHPIPEV 275 >gi|312908463|ref|ZP_07767418.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|310625567|gb|EFQ08850.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 512] gi|315029006|gb|EFT40938.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4000] Length = 319 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|294497805|ref|YP_003561505.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] gi|294347742|gb|ADE68071.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium QM B1551] Length = 326 Score = 128 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 106/324 (32%), Gaps = 51/324 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFASFFL 47 LVIG G I L V+ E++ + R ID L KD S F Sbjct: 2 ILVIGGAGYIGSHLVKELVKTNEVVVLDNLSTGHRWAIDEKAVFVEGNLGNEKDLESVFT 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDG 106 + D +++ AA + V ++ +P + N + + I+ ST + Sbjct: 62 NHKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQTMMKHNVKKFIFSSTAATYGI 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLLSM 162 S I E + TNP+N YG+SKL E+ +A +Y YV+LR + + + Sbjct: 122 PSVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVLRYFNAAGAYETAEIGEC 181 Query: 163 L------------RLAKERREISVVCDQFGTP--TSALQIARAI----IQIAHNLIENSD 204 L ER ISV + T T I+ Sbjct: 182 HDPETHLIPIILQHLLGERENISVFGSDYDTEDGTCIRDYIHVTDLANAHISALQALLDG 241 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 T +++ G + + + G + V + +A PA Sbjct: 242 TKKTATYNLGNGLGYS-----VKEVIETCEKVTGKKANV--VMAD---RRAGDPARLVAS 291 Query: 265 CSKLANTHNIRISTWKEGVRNILV 288 K+ + + + I+ Sbjct: 292 SDKIHAELGWKA---QISLEKIIA 312 >gi|313622441|gb|EFR92891.1| UDP-glucose 4-epimerase [Listeria innocua FSL J1-023] Length = 328 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGR---------------PDIDLLKPKDFAS 44 M +V+G G I ++ + + E++ V + D+ + Sbjct: 2 MSVVVLGGAGYIGSHAVDELINRGYEVVVVDSLGTGHQESIHKKAKFYEGDIRDKAFLNT 61 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S D +I+ AA + V ++ + P + N G + + + G+ ++ S+ Sbjct: 62 VFEKESIDSVIHFAASSLVGESMEVPLEYLNNNVYGTQVLLEVMEQFGVKHIVFSSSAAT 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PT+P + YG++KL E+ + +Y +V LR V + Sbjct: 122 YGEPERVPITEDMPTSPESTYGETKLIMEKMMKWCDKAYGMKFVALRYFNVAGAKADGSI 181 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 182 GEDHKPETHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYL 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 IF++ + G F+ E+A I + P +A P Sbjct: 242 KKGGESNIFNLGSSNG------FSVKEMLEAAR----SVTGKAIPAEVVPRRAGDPGTLI 291 Query: 263 LDCSKLANTHNIRIST 278 K + + Sbjct: 292 ASSDKAREILGWQPTY 307 >gi|307268523|ref|ZP_07549897.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] gi|306515154|gb|EFM83695.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX4248] Length = 320 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|323480311|gb|ADX79750.1| UDP-glucose 4-epimerase [Enterococcus faecalis 62] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQAAFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLNAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|169344045|ref|ZP_02865033.1| UDP-glucose 4-epimerase [Clostridium perfringens C str. JGS1495] gi|169297780|gb|EDS79877.1| UDP-glucose 4-epimerase [Clostridium perfringens C str. JGS1495] Length = 328 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 106/318 (33%), Gaps = 57/318 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVGRPD--------------IDLLKPKDFASF 45 M LV G G I + + +++ E++ + + DL K Sbjct: 1 MAILVCGGAGYIGSHMVAELIENNKEVVILDNFEKGHENAILGGKLYKGDLRDRKILDKI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYVF 104 F + + +I+ AAY+ V ++ EP F+ N G ++ +A + I + ST + Sbjct: 61 FTENNIEAVIDFAAYSLVGESMTEPLKYFNNNVSGTISLLEAMRDHNVKYIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLL 160 PI E P N YG+SKL E+ + Y I TA Y + + Sbjct: 121 GEPENIPILETDKNLPTNAYGESKLLVEKILKWCDTAYGIKYTALRYFNAAGAHVNGKIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 +R +I + D + T +A A L+ Sbjct: 181 EDHAPETHLIPLILQVALGKRDKIMMFGDDYDTKDGTCVRDYIHVSDLASAHSLALERLM 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ I+++ G + + + + G + I + P +A PA Sbjct: 241 NGGESR---IYNLGNGTGFT-----VKEVVEVARKVTG-----HPIPAEVAPRRAGDPA- 286 Query: 261 SCL--DCSKLANTHNIRI 276 L K N + Sbjct: 287 -ILIASSDKAIEELNWKP 303 >gi|257415685|ref|ZP_05592679.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257157513|gb|EEU87473.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 112/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I + P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPARIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|28394168|dbj|BAC57041.1| dTDP-glucose-4,6-dehydratase [Micromonospora griseorubida] Length = 342 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/329 (17%), Positives = 106/329 (32%), Gaps = 63/329 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-------QDVEIIRVG----------------RPDI--- 34 M+ LV G G I + + I + PD+ Sbjct: 1 MRVLVTGGAGFIGSHFVRQLLAGAYQRWHGAQTIVLDKLTYAGNLANLAPVAHHPDLTFT 60 Query: 35 --DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG 92 D+ + + D++++ AA + VD++ + N +G + AA G Sbjct: 61 QGDVCDRELVENLMRGV--DLVVHFAAESHVDRSIAAADAFVRTNVQGTHTLLDAAVRAG 118 Query: 93 -IPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 +++STD V+ + E P P + Y SK + ++ + + R Sbjct: 119 VERFVHVSTDEVYGSIEEGSWTEEQPLAPNSPYAASKAGSDLLALAFHRTHGLPVCVTRC 178 Query: 148 AWVYSIFGSNFLLSMLR--LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENS 203 + Y + L L + + + D I +A + Sbjct: 179 SNNYGPYQYPEKLIPLFTTNLLDGLPVPLYGDGRNQRDWLHVDDHCHGIDLVATGGVPGE 238 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----A 259 ++H+ G +S AD ++ G V R+ A RP Sbjct: 239 ------VYHI-GGGTELSNADLTAHLLDLC---GADELSVRRV--------ADRPGHDLR 280 Query: 260 YSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 YS LD SK++ ++ EG+ + + Sbjct: 281 YS-LDISKISRELGYTPRVSFAEGLADTV 308 >gi|256854076|ref|ZP_05559441.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300860730|ref|ZP_07106817.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] gi|256711019|gb|EEU26062.1| UDP-glucose 4-epimerase [Enterococcus faecalis T8] gi|300849769|gb|EFK77519.1| UDP-glucose 4-epimerase [Enterococcus faecalis TUSoD Ef11] Length = 330 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|317479986|ref|ZP_07939101.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] gi|316903931|gb|EFV25770.1| NAD dependent epimerase/dehydratase [Bacteroides sp. 4_1_36] Length = 348 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 108/347 (31%), Gaps = 70/347 (20%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVGRPDI------------------------- 34 M LV G G I +L + + ++ + VG ++ Sbjct: 1 MNVLVTGAAGFIGSNLCMRLLEEQLDTLVVGLDNLNTYYDVNIKQWRLEQLTKFGNRFVF 60 Query: 35 ---DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA--- 88 ++ F + P +++N AA V + P N G I +A Sbjct: 61 VKGNIADKALVDKLFDEYQPQIVVNLAAQAGVRYSITNPGAYIESNLIGFYNILEACRHS 120 Query: 89 ----DSIGIPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYV 143 +Y S+ V+ + P NP+++Y +K + E +Y+ Y Sbjct: 121 YDEGREGVKHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYD 180 Query: 144 ILRTAWVY-------SIFGSNFLLSMLRLAK-ERREISVVCDQFGTPTSALQIARAIIQI 195 I T + + +L K E+ +I + T I ++++ Sbjct: 181 IPSTGLRFFTVYGPAGRPDMAYFGFTDKLLKGEKIKIFNYGNCKRDFTYVDDIVEGVMRV 240 Query: 196 AHNLIENSDTS------LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS-------- 241 E ++++ + + DF + + E G + Sbjct: 241 MAKAPERRMGEDGLPIPPYKVYNIGNNHPE-NLLDFVQILQEELIRAGVLPADYDFEAHK 299 Query: 242 KVYRIFTKQYP-TKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 ++ + P T A D + L + ++ +EG+RN Sbjct: 300 ELVPMQPGDVPVTYA--------DTTALGRDFGFKPNTSLREGLRNF 338 >gi|170017858|ref|YP_001728777.1| UDP-glucose 4-epimerase [Leuconostoc citreum KM20] gi|169804715|gb|ACA83333.1| UDP-glucose 4-epimerase [Leuconostoc citreum KM20] Length = 330 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 62/333 (18%), Positives = 112/333 (33%), Gaps = 64/333 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ ++ Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVEAGREVVVVDALFTGHRDAVNPAAKFYQVDIRDKAALSA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ P F N G + + + + ++ ST Sbjct: 61 VFEQENIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKAHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E P NP+N YG+SKL E+ +A + A Y + Sbjct: 121 YGNPVNIPIKETDPQNPINPYGESKLMMEKIMAWSDQADGVKWVALRYFNVAGAAEDGTI 180 Query: 160 LSMLRL------------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + +R I + D + TP L +A A I+ L Sbjct: 181 GEDHKPETHLVPIILQAGLGQRDYIEMFGDDYKTPDGFNVRDYVHVLDLADAHIRALKYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 + D++ + G + F+ E+A I K P +A P Sbjct: 241 ADGHDSNQF-------NLGSAT--GFSVKEMVEAAREATGVD----IPAKIGPRRAGDPD 287 Query: 259 ---AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 A S K + + V++I+ Sbjct: 288 ILIANS----DKARDVLGWAPKY--DNVQDIIK 314 >gi|257463741|ref|ZP_05628130.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] gi|317061285|ref|ZP_07925770.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] gi|313686961|gb|EFS23796.1| UDP-glucose 4-epimerase [Fusobacterium sp. D12] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 101/321 (31%), Gaps = 61/321 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE------------IIRVG-RPDI---DLLKPKDFAS 44 M LV G G I + + E + V R ++ DL Sbjct: 1 MAVLVCGGAGYIGSHVVRALLDQGENVVVIDNLVTGHVDAVDERAELLLGDLRDEAFLHH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S D +I+ AA++ V ++ +EP F N G + KA ++ ST Sbjct: 61 AFERHSIDGVIDFAAFSLVGESVEEPLKYFDNNVYGTLCLLKAMQKYKVNNIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + PI E T P N YG+SKL E+ + +Y Y +LR V S + Sbjct: 121 YGEPENIPILETDTTFPTNPYGESKLCVEKMLKWCDKAYGMKYTVLRYFNVAGAHESGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 A ER +I + D + PT R I + + Sbjct: 181 GEAHTTETHLIPIVLQVAAGEREKIGIYGDDY--PTQDGTCIRDYIHVMDLADAHILA-- 236 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV---------YRIFTKQYPTKAHRP 258 + GG + IF G +V + I + P +A P Sbjct: 237 ---LNRLRRGGEST-------IFNLGNGEGFSVKEVIDVCRKVTGHPIPAEVSPRRAGDP 286 Query: 259 AYSCLDCSKLANTHNIRISTW 279 A K + W Sbjct: 287 AKLVASSEKAIHEL-----HW 302 >gi|241895195|ref|ZP_04782491.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] gi|241871501|gb|EER75252.1| UDP-galactose 4-epimerase [Weissella paramesenteroides ATCC 33313] Length = 330 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 113/328 (34%), Gaps = 56/328 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I + + + D +++ V R ++D+ + Sbjct: 1 MSVLVLGGAGYIGSHMVATLLADHRDVVVVDNLLTGHRASVPEGVPFYEVDIRDKAALSE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA + V ++ ++P F N G + + + ++ ST Sbjct: 61 VFEKENIEQVVHFAASSIVPESVEKPLKYFDNNVYGMINLLEVMLDFDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SI 153 + PI E +P NP+N YG+SKL E + Y + A Y SI Sbjct: 121 YGVAKENPIKETTPQNPINPYGESKLQMEHIMKWADQAYGLKWVALRYFNVAGAKADGSI 180 Query: 154 FGSNFLLSML------RLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + L +R +I + D + TP + +A A + L Sbjct: 181 GEDHPTETHLVPIILQTALGQREKIMMFGDDYNTPDGFNVRDYVHVMDLADAHVLALDYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + ++++ + G + F+ E+A I + P +A P Sbjct: 241 AKGNESNQF-------NLGSAN--GFSVKQMVEAAREATG----QPIPAEIGPRRAGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNIL 287 K + V+ I+ Sbjct: 288 SLVASSDKAREILGWTPKY--DDVKEII 313 >gi|114326766|ref|YP_743923.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] gi|114314940|gb|ABI61000.1| dTDP-glucose 4,6-dehydratase [Granulibacter bethesdensis CGDNIH1] Length = 349 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 65/337 (19%), Positives = 113/337 (33%), Gaps = 63/337 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVG------------------RPDI---DLL 37 M+ LV G G I ++ ++D ++ V R + D+ Sbjct: 1 MRILVTGGCGFIGSAVIRHLIRDTAHSVVNVDKMTYAASEDALEEALTDPRHTLVKADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------ 91 A F + PD +++ AA + VD++ D P N G + +AA Sbjct: 61 DATAIAQVFATHRPDAVMHLAAESHVDRSIDGPAQFVQTNVVGTLVMLEAAREHWSAHRP 120 Query: 92 --GIPCIYISTDYVFDGLSRT--PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 G +ISTD VF L P E + +P + Y SK + V ++ + Y Sbjct: 121 EGGGRFHHISTDEVFGALENGDPPFTETTSYDPRSPYSASKAGSDHLVRAWHHTYGMPTF 180 Query: 144 ILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNL 199 + T Y F + + A E +E+ V D A A+++ Sbjct: 181 VSNTTNNYGPWQFPEKLIPLVTLNALEGKELPVYGDGSNQRDWLYVDDHAEALVRTLER- 239 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAER----GGPYSKVYRIFTKQYPTKA 255 G + P S + I E GG ++ R T Sbjct: 240 -----GEPGGTY-AIGARQPRSNLEVVRTICSVLDELVPDAGGKRERLIRFVTD------ 287 Query: 256 HRPAYSC---LDCSKLANTHNIRIST-WKEGVRNILV 288 RP + +D S+ + + +++G+R + Sbjct: 288 -RPGHDFRYEIDPSRAEAALDWKAPHDFEKGIRRTVQ 323 >gi|257416950|ref|ZP_05593944.1| UDP-glucose 4-epimerase [Enterococcus faecalis AR01/DG] gi|257158778|gb|EEU88738.1| UDP-glucose 4-epimerase [Enterococcus faecalis ARO1/DG] Length = 330 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRAAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|294505718|ref|YP_003569778.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] gi|294352124|gb|ADE72447.1| NAD dependent epimerase/dehydratase [Bacillus megaterium QM B1551] Length = 305 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 106/314 (33%), Gaps = 57/314 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEIIRVGR------------PDI---DLLKPKDFAS 44 MK +V G G I L + + E+ + + D+ + Sbjct: 1 MKAIVTGGAGFIGSHLVEELIIKGFEVHIIDSMISGKQENIHPLATLHVEDICSKQA-RQ 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 L P+++ + AA V + ++P+ +N +G I +A I+ ST V Sbjct: 60 IILQEKPNIVFHLAAQADVSTSINDPQYDADVNVKGTINILEACRDASVDKIIFASTSAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L + I E PT P++ YG SKL E + ++ +Y ILR VY + Sbjct: 120 YGELQKDLITEMDPTAPISYYGLSKLTAESYIRLFSRLYGLSYTILRYGNVYGPRQTPKG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + L + +++ D Q I I D + I H Sbjct: 180 EGGVVAVFLDRLDKGTMLNIHGDGEQTRDFIYVKD-------IVQANIAAIDKGHQEIIH 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 + S + E + G SK+ T+ RP +SCLD K Sbjct: 233 -ASTTQRTS----VNRLLKELEKIHG--SKINISHTE------GRPGDIKHSCLDSKKAH 279 Query: 270 NTHNIRISTWKEGV 283 W+ V Sbjct: 280 KLL-----EWRSQV 288 >gi|117164650|emb|CAJ88196.1| putative dTDP-glucose 4,6-dehydratase [Streptomyces ambofaciens ATCC 23877] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 110/325 (33%), Gaps = 55/325 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-------EIIRVG-------RPDI------------ 34 M+ +V G G I V E++ + R ++ Sbjct: 1 MRIVVTGGAGFIGSHFVRQAVTGAYTGGTAPEVVVLDKLTYAGNRANLAPAEDYPGLTFV 60 Query: 35 --DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSI 91 D+ P A D++++ AA + VD++ E N G + A+ + Sbjct: 61 RGDICDPALVADVL--TGCDLVVHFAAESHVDRSISGSEEFIRTNVLGTQVLLDASLRAE 118 Query: 92 GIPCIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 +++STD V+ + E P P + Y SK + + V ++ + + R Sbjct: 119 VQKFVHVSTDEVYGSIDEGSWSEDRPLEPNSPYSASKASSDLLVRAFHRTHGLPVCVTRC 178 Query: 148 AWVYSIFGSNFLLSMLRLAK--ERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENS 203 + Y + + + L + + + R++ + D RAI +A Sbjct: 179 SNNYGPYQNPEKMIPLFVTQLLDGRKVPLYGDGGHVRDWLHVDDHCRAIALVAEKGEAGE 238 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 ++++ + D E + G +S V + R YS Sbjct: 239 ------VYNIGGGTELANR-DLTERLLRMV---GADWSMVENV--ADRKGHDRR--YSV- 283 Query: 264 DCSKLANTHNIRIS-TWKEGVRNIL 287 D +K++ R +++EG+ + Sbjct: 284 DIAKISTELGYRPRVSFEEGLAETV 308 >gi|307290707|ref|ZP_07570612.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] gi|306498236|gb|EFM67748.1| UDP-glucose 4-epimerase [Enterococcus faecalis TX0411] Length = 310 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLCS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|260432001|ref|ZP_05785972.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] gi|260415829|gb|EEX09088.1| UDP-glucose 4-epimerase [Silicibacter lacuscaerulensis ITI-1157] Length = 327 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 101/308 (32%), Gaps = 47/308 (15%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVEIIRVGRPDI----------------DLLKPKDFASF 45 LV G G I Q + V ++ DLL Sbjct: 3 NILVTGGAGYIGSHACKALAQAG-YVPVTYDNLVTGWQDAVKFGPFEQGDLLDRARLDQV 61 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + P +++ AA + V +A EP + N G+ + +AA + G ++ ST + Sbjct: 62 FAKYQPAAVMHFAALSQVGEAMSEPGRYWRNNVTGSLNLIEAAVAAGCLDFVFSSTCATY 121 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLL 160 +DE +P +PLN YG SK A E+ + ++ N+VI R V + Sbjct: 122 GDHDNVVLDENTPQHPLNAYGASKRAIEDILRDFEQAHGLNHVIFRYFNVAGADPDGDVG 181 Query: 161 SMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQI---AHNLIENS 203 R + +R ++V + TP T + L Sbjct: 182 EFHRPETHLVPLLLDAIDGKRDALTVFGTDYDTPDGTCIRDYVHVCDLVDAHVLGLRWLE 241 Query: 204 DTSLRGIFHMTADGGPVSWADFAE-------YI-FWESAERGGPYSKVYRIFTKQYPTKA 255 +F++ G A+ + F R G +K+ T+ Sbjct: 242 QGKGSRVFNLGTGTGFSVKEVIAQSHSVTNREVPFNVGPRRAGDCTKLVSGSTRAEAELG 301 Query: 256 HRPAYSCL 263 RP S L Sbjct: 302 WRPKRSRL 309 >gi|148543576|ref|YP_001270946.1| UDP-galactose 4-epimerase [Lactobacillus reuteri DSM 20016] gi|184152983|ref|YP_001841324.1| UDP-glucose 4-epimerase [Lactobacillus reuteri JCM 1112] gi|194468123|ref|ZP_03074109.1| UDP-glucose 4-epimerase [Lactobacillus reuteri 100-23] gi|227363464|ref|ZP_03847586.1| UDP-galactose 4-epimerase [Lactobacillus reuteri MM2-3] gi|325681926|ref|ZP_08161444.1| UDP-glucose 4-epimerase [Lactobacillus reuteri MM4-1A] gi|148530610|gb|ABQ82609.1| UDP-galactose 4-epimerase [Lactobacillus reuteri DSM 20016] gi|183224327|dbj|BAG24844.1| UDP-glucose 4-epimerase [Lactobacillus reuteri JCM 1112] gi|194452976|gb|EDX41874.1| UDP-glucose 4-epimerase [Lactobacillus reuteri 100-23] gi|227071478|gb|EEI09779.1| UDP-galactose 4-epimerase [Lactobacillus reuteri MM2-3] gi|324978570|gb|EGC15519.1| UDP-glucose 4-epimerase [Lactobacillus reuteri MM4-1A] Length = 331 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 78/227 (34%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIR----VGRPDI----------DLLKPKDFAS 44 M LV G G I + +++ E ++ G D D+ + Sbjct: 1 MSILVAGGAGYIGSHMVKDLIENGEDVVVADNLSTGHRDAINPKAKFYEGDIRDRQFLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTDYV 103 F + +++ AA++ V ++ +P F N G + +A I I + ST Sbjct: 61 IFDNEDITAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLEAMHDHDIKYIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P P+N YG SKL EE + Y I A Y Sbjct: 121 YGVPEHMPIKETDPQKPINPYGLSKLMMEEMMDWADKAYGIKFVALRYFNVAGAAPDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+S+ D + TP T+ + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELSIFGDDYNTPDGTNVRDYVHVM 227 >gi|227892776|ref|ZP_04010581.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] gi|227865417|gb|EEJ72838.1| UDP-glucose 4-epimerase [Lactobacillus ultunensis DSM 16047] Length = 330 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 57/329 (17%), Positives = 115/329 (34%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LVIG G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVIGGAGYIGSHAVRELVREGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ KA + G ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVSGMISLLKAMNDAGTKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLNPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGASSDGKI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A + ++ D + T T+ + I L Sbjct: 181 GEDHAPETHLIPNILKSALSGDGKFTIFGDDYNTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 T+ +F++ G + I + + G Y R P Sbjct: 241 MKTNKSDVFNLGTAHGYSN-----LEILESAKKVTGIDIP--------YTMGPRRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 288 SLVADSTKARTVLGWKPKH--ENVDDVIA 314 >gi|300769776|ref|ZP_07079658.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492684|gb|EFK27870.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 342 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I + V+ +++ V R + DL Sbjct: 12 MSILVLGGAGYIGSHMVDRLVEHGTDVVVVDNLVTGHRAAVNSAAKFYQGDLRDADFLNH 71 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ +P F N G + + + + ++ ST Sbjct: 72 VFDTEDIEAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLETMQAHDVKQIVFSSTAAT 131 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P+N YG SKL E+ + Y I A Y Sbjct: 132 YGTPKQIPIKETDPQLPINPYGASKLMMEQIMHWADVAYGIKFVALRYFNVAGAKPDGSI 191 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+ + D + TP T+ + Sbjct: 192 GEDHGPETHLVPIILQVAQGKRDELKIFGDDYNTPDGTNVRDYVHVV 238 >gi|20808331|ref|NP_623502.1| UDP-glucose 4-epimerase [Thermoanaerobacter tengcongensis MB4] gi|20516937|gb|AAM25106.1| UDP-glucose 4-epimerase [Thermoanaerobacter tengcongensis MB4] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 108/328 (32%), Gaps = 55/328 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD---------IDLLKPKDFASF 45 M LV G G I ++ ++ ++ E++ G + DL Sbjct: 1 MAILVCGGAGYIGSHAVYALLKRNEEVVVVDNLATGHSESVLGGKLYIGDLRDEDFLDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +++ AA + V ++ + P + N G ++ KA G ++ ST V+ Sbjct: 61 FSENDIEAVMHFAASSLVGESVENPFKYYENNVCGTLSLLKAMKKHGVKKIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 R PI+E T P N YG++KLA E+ + Y I A Y Sbjct: 121 GEPERIPIEEEDRTEPTNPYGETKLAIEKMLKWADAAYGIKYVALRYFNVAGALETGEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQF----GTPTSALQIARAIIQI-AHNLIENS 203 S + + +R ++ + D + GTP ++ L + Sbjct: 181 EDHSPETHLIPIILQVALGKRDKVMIYGDDYPTKDGTPIRDYIHVMDLVDAHILALEKLR 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SC 262 + ++++ G + + + + G + I + RP + Sbjct: 241 KENKSEVYNLGNGEGFT-----VKEVIEVARKVTG-----HPIPAE---VTGRRPGDPAV 287 Query: 263 L--DCSKLANTHNIRISTWKEGVRNILV 288 L K R + I+ Sbjct: 288 LVASSEKAMKDLGWRPKY--ASLEEIIK 313 >gi|304437349|ref|ZP_07397308.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369605|gb|EFM23271.1| UDP-glucose 4-epimerase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 44/259 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII----------------RVGRPDIDLLKPKDFAS 44 M LV G G I V+ E + + D+ Sbjct: 1 MAILVCGGAGYIGSHAVHALVEKGEQVVIVDNLQTGHRGALNPAATFYEGDIRDAAVLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + +A G ++ ST V Sbjct: 61 IFTENKIEAVIHFAANSLVGESVEKPLLYFNNNVYGMQVLLEAMVRHGIDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E T+P N YG++KL E+ + + YV LR + Sbjct: 121 YGEPKRVPIHEDDETHPTNPYGETKLTMEKMMKWVSRANGVRYVSLRYFNAAGALPDGSI 180 Query: 160 LSMLRL------------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 +R I+V + + TP + +A A ++ L Sbjct: 181 GEDHATETHLIPLILQVPLGKRDHITVFGEDYPTPDGTCLRDYIHVIDLADAHVRALDYL 240 Query: 200 IENSDTSLRGIFHMTADGG 218 + +++ IF++ G Sbjct: 241 RQGGESN---IFNLGNGQG 256 >gi|206563875|ref|YP_002234638.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] gi|198039915|emb|CAR55892.1| putative UDP-glucose 4-epimerase [Burkholderia cenocepacia J2315] Length = 329 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 102/322 (31%), Gaps = 63/322 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASF 45 MK LV G G I + + + G D D+L + Sbjct: 1 MKVLVTGGAGYIGSHTCKALAEAGHEPVAYDNLSTGHRDAVRWGPLVAADILDRDALSRA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 + PDV+I+ AA V ++ PE +++N G + A + G+ + S+ + Sbjct: 61 LAAHRPDVVIHFAALAYVGESVLAPERYYTVNVTGTCTLLSAMRAAGVGRIVMSSSCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E +P P+N YG +K A E A + Y + A Y Sbjct: 121 GIPEALPISERTPQRPINPYGFTKYAMERMAADFERAYGLKWIALRYFNAAGADPDGAIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLI 200 + L++ + V+ + TP +A A ++ + L Sbjct: 181 ECHAPETHALPLAIRAALRTGDAFRVMGTDYPTPDGSAIRDYVHVSDLADAHLKASAYLC 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP-- 258 + + T +G V +A R R+ T A RP Sbjct: 241 GGGPSVALNL--GTGNGTSV-----------LAALRAVEAVTGRRVPT---VLAARRPGD 284 Query: 259 ---AYSCLDCSKLANTHNIRIS 277 Y+ D + A R Sbjct: 285 PPALYA--DATMAARVLGWRPR 304 >gi|308179728|ref|YP_003923856.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045219|gb|ADN97762.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 331 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I + V+ +++ V R + DL Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEHGTDVVVVDNLVTGHRAAVNSAAKFYQGDLRDADFLNH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ +P F N G + + + + ++ ST Sbjct: 61 VFDTEDIEAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLETMQAHNVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P+N YG SKL E+ + Y I A Y Sbjct: 121 YGTPKQIPIKETDPQLPINPYGASKLMMEQIMHWADVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+ + D + TP T+ + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELKIFGDDYNTPDGTNVRDYVHVV 227 >gi|325284119|ref|YP_004256660.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] gi|324315928|gb|ADY27043.1| UDP-glucose 4-epimerase [Deinococcus proteolyticus MRP] Length = 331 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 42/248 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEI-----IRVGRP----------DIDLLKPKDFAS 44 M LV G G I + ++ E+ + G DLL P Sbjct: 1 MTILVTGGAGYIGSHTVRALLKAGYEVAVFDNLSSGHAAALPHGVRLFQADLLNPDAVMQ 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI--PCIYISTDY 102 + II+ AA V ++ EP + N G+ + + + G P ++ ST Sbjct: 61 ALAETQAEAIIHFAARIEVGESMREPLGYYRNNVLGSLNLLQEIQNTGRRIPLVFSSTAA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGSNF 158 V+ PI E +P P ++YG++KL E+ + + + +LR V Sbjct: 121 VYGTTDAVPIPEDAPLRPESVYGETKLMTEQMIRAAHAAHGQPYTVLRYFNVCGASPEGD 180 Query: 159 L------------LSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHN 198 + L+ + +R ++ V D + TP +A A + Sbjct: 181 IGEAHASQTHLIELACMTALGKRAKMMVFGDDYPTPDGTCLRDYIHVQDLAGAHVLALKA 240 Query: 199 LIENSDTS 206 L++ + Sbjct: 241 LLDGRHGA 248 >gi|322382715|ref|ZP_08056567.1| UDP-glucose epimerase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153324|gb|EFX45760.1| UDP-glucose epimerase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 331 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 103/313 (32%), Gaps = 57/313 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPD-----IDLLKPKDFAS 44 MK V G G I L V+ E+ + P +D+ + + Sbjct: 26 MKVAVTGGAGFIGSHLVDELVESGHEVHVIDNLSSGYREYVHPKAYFHLLDIR-EESCRA 84 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + P + + AA V + P + +N G + K G ++ ST V Sbjct: 85 WIHKEKPALFYHLAAQADVQLSLLHPYVDGDVNITGTVKLLKTCAESGVQKFVFASTSGV 144 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L + + E P P++ YG SK E + + + ILR VY + Sbjct: 145 YGELQKERVTETDPVQPISFYGLSKCTAESYIRLFYMLFGLPFTILRFGNVYGPRQTPKG 204 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ KE ++V D Q + A L ++ + I+H Sbjct: 205 EGGVVALFVKRMKEGLPLTVYGDGEQTRDFIYVNDVVTA-------LTASASKGNQEIYH 257 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 ++ G S D + +KV+ + A RP +SCL K Sbjct: 258 VS-TGTHTSVNDLVRH-----------LAKVHSQPVEILSRPA-RPGDIRHSCLSALKAE 304 Query: 270 NTHNIRISTWKEG 282 WK G Sbjct: 305 KEL-----EWKAG 312 >gi|169831835|ref|YP_001717817.1| dTDP-glucose 4,6-dehydratase [Candidatus Desulforudis audaxviator MP104C] gi|169638679|gb|ACA60185.1| dTDP-glucose 4,6-dehydratase [Candidatus Desulforudis audaxviator MP104C] Length = 342 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 106/323 (32%), Gaps = 57/323 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ---DVEIIRVGR----------PDI-----------DL 36 M+ LV G G I + ++ D + + + ++ D+ Sbjct: 1 MRLLVTGGAGFIGANFIRFVLREYPDWHVTNLDKLTYAGNLENLREVEDNPRYTFVRGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-C 95 + A F D ++N AA + VD++ + N G + +AA G+ Sbjct: 61 ADREAVAGLFAGGGFDAVVNFAAESHVDRSILDAGPFIETNVRGTQVLLEAARRYGVRVF 120 Query: 96 IYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAW 149 + +STD V+ G P E P P + Y SK A + +Y Y V+ R + Sbjct: 121 LQVSTDEVYGSLGPDDPPFTEEHPVKPNSPYSASKAAADLLCRAYHETYGLPVVVNRCSN 180 Query: 150 VYSIFGSNFLLSMLRLAK--ERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 Y + L L +A E + + V D R I + Sbjct: 181 NYGPYQFPEKLIPLMIANVLENKPLPVYGDGLNVRDWIHVEDHCRGIAAALRRGRPGA-- 238 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC--- 262 +++ + D I P S + + A RP + Sbjct: 239 ----VYNFGGRAERTN-LDVVRTILRILDR---PESLIRFV--------ADRPGHDRRYA 282 Query: 263 LDCSKLANTHNIRIS-TWKEGVR 284 +D ++ + R T+++G+ Sbjct: 283 MDIARAERELDWRPRWTFEDGLE 305 >gi|167461791|ref|ZP_02326880.1| nucleoside-diphosphate-sugar epimerases [Paenibacillus larvae subsp. larvae BRL-230010] Length = 306 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 103/313 (32%), Gaps = 57/313 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG----------RPD-----IDLLKPKDFAS 44 MK V G G I L V+ E+ + P +D+ + + Sbjct: 1 MKVAVTGGAGFIGSHLVDELVESGHEVHVIDNLSSGYREYVHPKAYFHLLDIR-EESCRA 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + P + + AA V + P + +N G + K G ++ ST V Sbjct: 60 WIHKEKPALFYHLAAQADVQLSLLHPYVDGDVNITGTVKLLKTCAESGVQKFVFASTSGV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN-- 157 + L + + E P P++ YG SK E + + + ILR VY + Sbjct: 120 YGELQKERVTETDPVQPISFYGLSKCTAESYIRLFYMLFGLPFTILRFGNVYGPRQTPKG 179 Query: 158 ---FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + ++ KE ++V D Q + A L ++ + I+H Sbjct: 180 EGGVVALFVKRMKEGLPLTVYGDGEQTRDFIYVNDVVTA-------LTASASKGNQEIYH 232 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLA 269 ++ G S D + +KV+ + A RP +SCL K Sbjct: 233 VS-TGTHTSVNDLVRH-----------LAKVHSQPVEILSRPA-RPGDIRHSCLSALKAE 279 Query: 270 NTHNIRISTWKEG 282 WK G Sbjct: 280 KEL-----EWKAG 287 >gi|238927347|ref|ZP_04659107.1| UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] gi|238884629|gb|EEQ48267.1| UDP-glucose 4-epimerase [Selenomonas flueggei ATCC 43531] Length = 329 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 90/259 (34%), Gaps = 44/259 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII----------------RVGRPDIDLLKPKDFAS 44 M LV G G I V+ E + + D+ Sbjct: 1 MAILVCGGAGYIGSHAVHALVEKGEQVVIVDNLQTGHRGALNPAATFYEGDIRDAAVLDK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ ++P + F+ N G + +A G ++ ST V Sbjct: 61 IFTENKIEAVIHFAANSLVGESVEKPLLYFNNNVYGMQVLLEAMVRHGIDKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E T+P N YG++KL E+ + + YV LR + Sbjct: 121 YGEPKRVPIHEDDETHPTNPYGETKLTMEKMMKWVSRANGVRYVSLRYFNAAGALPDGSI 180 Query: 160 LSMLRL------------AKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 +R I+V + + TP + +A A ++ L Sbjct: 181 GEDHATETHLIPLILQVPLGKRDHITVFGEDYPTPDGTCLRDYIHVVDLADAHVRALDYL 240 Query: 200 IENSDTSLRGIFHMTADGG 218 + +++ IF++ G Sbjct: 241 RQGGESN---IFNLGNGQG 256 >gi|167754562|ref|ZP_02426689.1| hypothetical protein CLORAM_00064 [Clostridium ramosum DSM 1402] gi|237733800|ref|ZP_04564281.1| UDP-glucose 4-epimerase [Mollicutes bacterium D7] gi|167705394|gb|EDS19973.1| hypothetical protein CLORAM_00064 [Clostridium ramosum DSM 1402] gi|229383138|gb|EEO33229.1| UDP-glucose 4-epimerase [Coprobacillus sp. D7] Length = 324 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 107/321 (33%), Gaps = 62/321 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 M LV+G G I +++ V+ ++ G ++ DL + Sbjct: 1 MSILVLGGAGYIGSHTVYQLIENGKEVVIVDNLQTGFKELIHPKAKFYQGDLRDKTFLNN 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F D +I+ AA + V + EP + N G + + + + ++ ST Sbjct: 61 VFEQEKIDGVIHFAANSLVGVSMKEPLEYYDNNVYGMIVLLEVMKNHSVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + R PI+E T P N YG++KLA E+ + +Y ++V LR + + Sbjct: 121 YGEPKRIPIEEDDETYPTNPYGETKLAMEKLMKWCSSAYGMSFVALRYFNACGAHPNGKI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNL 199 + R I V D + T + +A A I+ + L Sbjct: 181 GELHNPETHLIPLILQVPLGIRESIYVFGDDYDTKDGTCIRDYIHVMDLADAHIKALNYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR-- 257 + ++ IF++ G I + + V TKA R Sbjct: 241 KAGNPSN---IFNLGNGEGYS-----VLEIINAAKKVTNLPIAV---------TKAARRA 283 Query: 258 --PAYSCLDCSKLANTHNIRI 276 PA + +K Sbjct: 284 GDPAKLVANNTKAKEILGWEP 304 >gi|194306032|dbj|BAG55466.1| UDP-glucose 4-epimerase [uncultured bacterium] Length = 336 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 91/266 (34%), Gaps = 49/266 (18%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG----------------------RPDIDLL 37 M LV G G I + + + + + DLL Sbjct: 1 MHILVTGGAGYIGSHTVLELLNAGYAVTIIDNLSNSKIQSVERVNALTGKEAAFYEADLL 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIY 97 P+ F + S D +I+ AA AV ++ ++P + + N G + +A G+ I Sbjct: 61 DPEALDKVFEANSFDAVIHFAALKAVGESVEKPLLYYRNNVAGTLNLVEAMQKHGVKNIV 120 Query: 98 ISTDY-VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEE-----KVASYTNNYVILRTAWVY 151 S+ V+ PI E +P + N YG++KL E+ VA N ++LR Sbjct: 121 FSSSCTVYGNPETVPIREDAPRSAYNPYGRTKLMMEDILSDVYVADNEWNVILLRYFNPI 180 Query: 152 SIFGSNFLLSMLR-------------LAKERREISVVCDQFGTP--TSALQIARAIIQIA 196 S + +R + V + + TP T ++ +A Sbjct: 181 GAHPSGQIGEDPNGIPNNLVPYIAQVAVGKRPFLRVWGNDYDTPDGTGVRDYIH-VVDLA 239 Query: 197 HNLIEN----SDTSLRGIFHMTADGG 218 + +D G +++ G Sbjct: 240 RGHLAALDKLADKPGVGAYNLGTGRG 265 >gi|34762698|ref|ZP_00143689.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887655|gb|EAA24733.1| UDP-glucose 4-epimerase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 323 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------RPDI-DLLKPKDFAS 44 M LV G G I + + ++ +++ V ++ DL + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDEKAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y + S + Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 +R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 D IF++ G + + + + G + I + P +A PA Sbjct: 241 RDGGDSQIFNLGNGEGFS-----VKEVIEVTRKVTG-----HPIPAEVSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K + + Sbjct: 289 LIASSKKAIDVLKWKP 304 >gi|307596597|ref|YP_003902914.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] gi|307551798|gb|ADN51863.1| NAD-dependent epimerase/dehydratase [Vulcanisaeta distributa DSM 14429] Length = 293 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 93/292 (31%), Gaps = 34/292 (11%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--RPD-----IDLLKPKDFASFFLSFSPD 52 MK LV G++G + +++ + M + + + + + ID+ + D D Sbjct: 1 MKILVTGSSGFLGRNIVNCMRSKGHDARGLDIVKAETTDYIIDITRRDDVIG-LSKEGFD 59 Query: 53 VIINPAAYTAVDKAEDEPEI--AFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRT 110 I++ AAY ++ +N G + + A + + ST V+ ++ Sbjct: 60 AIVHLAAYPNP-RSFTNAGALKGLDVNVVGTINMLELARILNARFLLYSTSNVYGKPTKL 118 Query: 111 PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWV----YSIFGSNFLLSMLRLA 166 P+ E P P YG SK+A E SY + + T + Y + + + A Sbjct: 119 PVTEDDPLRPFEGYGWSKVAAEAVSMSYHVVHKVPVTIFRLWKPYGPHDNGVVGIFITRA 178 Query: 167 KERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWAD 224 + ++ V T + A G+ G S D Sbjct: 179 LKNEDLVVNNGGVDTTDFLYVEDLCDATELALRKDDAVGQAFNIGL------GVETSILD 232 Query: 225 FAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRI 276 A I V ++ P S D SK + Sbjct: 233 LARIIVKLVGS--NSKINVQPRTSE--------PFRSYPDVSKAMRILGFKP 274 >gi|228994844|ref|ZP_04154641.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228764891|gb|EEM13648.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 304 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 105/308 (34%), Gaps = 54/308 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 MK LV G G I + +++ V+ + G D+ P Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDPN-IDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PIDE NP++ YG SKL E + Y Y ILR + VY + Sbjct: 120 YGNPQYLPIDENHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVYGARQNTD- 178 Query: 160 LSMLRLAKERREISVVCDQFG---TPTSALQIAR-----AIIQIAHNLIENSDTSLRGIF 211 E IS+ D+ +P + + +AH + I Sbjct: 179 -------GEAGVISIFMDRLFKNDSPIIYGDGNQTRDFIFVKDVAHANFLAFRNADNQIC 231 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKL 268 +++++ +S + + I RI+ ++ RP +S L K Sbjct: 232 NISSNQ-QISVNELLDTICNLMKIEN------KRIYKEE------RPGDVIHSYLSNDKA 278 Query: 269 ANTHNIRI 276 N Sbjct: 279 RKYLNWHP 286 >gi|258645828|ref|ZP_05733297.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] gi|260403198|gb|EEW96745.1| UDP-glucose 4-epimerase [Dialister invisus DSM 15470] Length = 337 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 102/285 (35%), Gaps = 50/285 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEI-------IRVGRPD----------IDLLKPKDFA 43 M LV G G I ++ E + G + D+ A Sbjct: 1 MNILVTGGAGYIGSHTVRALMKSEEFTPFVFDNLSTGHRESVPEEVAFIEGDIHDIAFVA 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 + D +I+ AA + V ++ EP +S N EG + G ++ ST Sbjct: 61 ETMKRYEIDGVIHFAASSLVAESMVEPGKYYSNNVEGTLHLLLGMRKAGVDKIVFSSTAA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 V+ +TPI+E P NP N+YG++KL E+ + +T Y + A Y Sbjct: 121 VYGEPEKTPIEEDFPHNPTNVYGRTKLVIEDMMRDFTAAYGLSYVALRYFNAAGAAEGGM 180 Query: 152 ----SIFGSNFLLSMLRLAKE-RREISVVCDQFGTP--------TSALQIARAIIQIAHN 198 S+ + +L+ A+ R IS+ + TP L +A A + Sbjct: 181 IGEDHQPESHLIPLILKTAQGVRDHISIYGTDYPTPDGTCLRDYIHVLDLADAHVLAMKY 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKV 243 L + +F++ ++ G I + + G KV Sbjct: 241 LAGGGVSD---VFNLGSENGFS-----VREIIEVAKKVTGVDFKV 277 >gi|326486494|gb|ADZ76320.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni] Length = 324 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 102/312 (32%), Gaps = 47/312 (15%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + + I + R DLL Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNNYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLT 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F D +++ AA+ V ++ P + N G + I ++ ST Sbjct: 61 SVFKQEKIDALVHFAAFAYVGESVVNPAKYYQNNVVGTINLLNVMLENNIKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASKDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I+V + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINVFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G ++ G S + I + G + ++ A Y+ Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEIVSGKKCLINYAPRRE-GDPAR--LYA-- 290 Query: 264 DCSKLANTHNIR 275 D K + Sbjct: 291 DNKKAKEILSWE 302 >gi|329893629|ref|ZP_08269763.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] gi|328923556|gb|EGG30868.1| dTDP-4-dehydrorhamnose reductase [gamma proteobacterium IMCC3088] Length = 293 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 20/286 (6%) Query: 1 MKCLVIGNNGQIAQSLSSMC--VQDVEIIRVGRPDIDLLKPKDFASFFLSFSPDVIINPA 58 M+ L++G + + +L + Q + D + SP+ +I+ Sbjct: 1 MRVLILGGDTPLGMALLRILDQQQRHRYEAITVSDSRFKSERVAKKTIKRLSPECLIDLR 60 Query: 59 --AYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGL-SRTPIDEF 115 A ++ + +I + KA I ++ S+ +VF G P E Sbjct: 61 LDALLETRESISDGDI------QRTRWFGKACLRNDIVYLFQSSAWVFSGTVEDAPWTES 114 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLAKERREISVV 175 + + G+ + A E+ V T+N +ILR + YS G L+ ML+ I++ Sbjct: 115 DQPDEESNLGRVRRAAEQAVKDMTSNSIILRLSPTYSAQGEGVLVKMLQRFGRGERIALS 174 Query: 176 CDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAE 235 Q+ P SA AR I I + S ++ RG+FH ++ S+ +F E +F +++ Sbjct: 175 DSQYFNPISADDGARVIAAILDQV--GSGSNNRGVFHYGSNE-RASYYEFGEAVFAAASQ 231 Query: 236 RGGPYS-KVYRIFTKQYPTKAHRPAYSCLDCSKLANTHNIRISTWK 280 S V R P L ++ ++ + ++W+ Sbjct: 232 FANIDSGGVARSSDASQPQG-----DWTLSTQRIFDSFGVHSTSWR 272 >gi|149375104|ref|ZP_01892876.1| UDP-glucose 4-epimerase [Marinobacter algicola DG893] gi|149360468|gb|EDM48920.1| UDP-glucose 4-epimerase [Marinobacter algicola DG893] Length = 327 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 101/318 (31%), Gaps = 57/318 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ-DVEII-----------RVGRPDI---DLLKPKDFASF 45 MK LV G G I + + +I+ V ++ DL + A Sbjct: 1 MKVLVTGGAGYIGSHVVRQLGEAGHDIVVFDNLSTGYRWAVTCGELVIGDLADEQAIADL 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + +++ AA V ++ + P + N + KA + +P ++ ST V+ Sbjct: 61 FSQHRFEAVLHFAANIVVPESVENPLKYYRNNTRNTLNLLKAVEEHQVPYMVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLL 160 T + E P P+N YG SK+ E + NYVILR V L Sbjct: 121 GMPEETVLTEDLPLAPINPYGASKMMSERMIMDLAAASSLNYVILRYFNVAGANPDGLLG 180 Query: 161 S------------MLRLAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLI 200 + +R +SV + T +A+A + + Sbjct: 181 QATPEATHLIKVACECVTGKRDGMSVFGTDYDTRDGTCIRDYIHVEDLAKAHVMALEYMA 240 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ + + G + + G V + +A PA Sbjct: 241 GGGESR---VLNCGYGRGFT-----VREVIDVVKRQSGNDFPVQ-----ETGRRAGDPA- 286 Query: 261 SCL--DCSKLANTHNIRI 276 L D S++ + Sbjct: 287 -ALMADNSRIKKVLGWQP 303 >gi|326486453|gb|ADZ76281.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni] Length = 324 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 63/312 (20%), Positives = 103/312 (33%), Gaps = 47/312 (15%) Query: 1 MK-CLVIGNNGQIAQS-LSSMCVQDVEIIRVG------------RPDI---DLLKPKDFA 43 MK LV+G G I L + D I + R DLL A Sbjct: 1 MKNILVVGGAGYIGSHTLKHLLDNDYNCIVMDNLIYGHKQAIDKRAKFIHADLLDTFSLA 60 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDY 102 S F D +++ AA+ V ++ P + N G + A + ++ ST Sbjct: 61 SVFKKEKIDALVHFAAFAYVGESVVNPAKYYQNNIVGTINLLNAMLENNVKDIVFSSTCA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------- 151 + TPIDE P NP+N YG++KL E+ A Y Y + + Y Sbjct: 121 TYGEPQYTPIDEKHPQNPINAYGRTKLMIEQVFADYEKAYGLRHISLRYFNAAGASKDGL 180 Query: 152 ---SIFGSNFLLSMLRLAKERR--EISVVCDQFGTP--TSALQIARA-IIQIAHNLIENS 203 S L+ ++ A + I++ + + T T + +AH L + Sbjct: 181 IGESHEPETHLIPLVLKAIKGEIPAINIFGNDYDTEDGTCIRDYIHVEDLALAHRLALEN 240 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL 263 G ++ G S + I + G + + A Y+ Sbjct: 241 LHKFSGCINLGTGIG-TS----VKEIISAAEIVSGKKCPINYAPRRD-GDPAR--LYA-- 290 Query: 264 DCSKLANTHNIR 275 D K + Sbjct: 291 DNKKAKEILSWE 302 >gi|315038810|ref|YP_004032378.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325957251|ref|YP_004292663.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|312276943|gb|ADQ59583.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1112] gi|325333816|gb|ADZ07724.1| UDP-galactose 4-epimerase [Lactobacillus acidophilus 30SC] gi|327183973|gb|AEA32420.1| UDP-galactose 4-epimerase [Lactobacillus amylovorus GRL 1118] Length = 330 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 120/337 (35%), Gaps = 72/337 (21%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LVIG G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ KA + G ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVAGMISLLKAMNDAGTKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLNPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGASSDGTI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA-------IIQIAHN 198 ++ + ++L+ A + ++ D + T T+ + I+ + H Sbjct: 181 GEDHAPETHLIPNILKSAISGDGKFTIFGDDYNTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 199 L-IENSDTSLRGIFHMTADGGPVSWADFAEYI------FWESAERGGPYSKVYRIFTKQY 251 + I SD G H ++ + + A+ + + RGG + Sbjct: 241 MKINKSDVFNLGTAHGYSNLEIL---ESAKKVTGIDIPYTMGPRRGGDPDSLVA------ 291 Query: 252 PTKAHRPAYSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 292 ------------DSTKARTILGWKPKH--ENVDDVIA 314 >gi|295703182|ref|YP_003596257.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] gi|294800841|gb|ADF37907.1| UDP-glucose 4-epimerase, galE [Bacillus megaterium DSM 319] Length = 326 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 111/326 (34%), Gaps = 55/326 (16%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFASFFL 47 LVIG G I L V+ E++ + R ID L KD S F Sbjct: 2 ILVIGGAGYIGSHLVKELVKTNEVVVLDNLSTGHRWAIDEKAVFVEGNLGNEKDLESVFA 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDG 106 + D +++ AA + V ++ +P + N + + I+ ST + Sbjct: 62 NHKIDAVMHFAANSLVGESVTDPLKYYQNNVAATLTLLQTMMKHNVKKFIFSSTAATYGI 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLLSM 162 S I E + TNP+N YG+SKL E+ +A +Y YV+LR + + + Sbjct: 122 PSVDIITEDTATNPINPYGRSKLMIEQILADFASAYDMEYVVLRYFNAAGAYETAEIGEC 181 Query: 163 L------------RLAKERREISVVCDQFGT--------PTSALQIARAIIQIAHNLIEN 202 L ER ISV + T +A A I L++ Sbjct: 182 HDPETHLVPIILQHLLGERENISVFGSDYDTADGTCIRDYIHVTDLANAHISALQALLDG 241 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 S + +++ G + + + G + V + +A PA Sbjct: 242 SKKTA--TYNLGNGLGYS-----VKEVIETCEKVTGKKANV--VMAD---RRAGDPARLV 289 Query: 263 LDCSKLANTHNIRISTWKEGVRNILV 288 K+ + + + I+ Sbjct: 290 ASSDKIHAELGWKA---QISLEKIIA 312 >gi|293389039|ref|ZP_06633518.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|312910521|ref|ZP_07769364.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] gi|291081615|gb|EFE18578.1| UDP-glucose 4-epimerase [Enterococcus faecalis S613] gi|311289183|gb|EFQ67739.1| UDP-glucose 4-epimerase [Enterococcus faecalis DAPTO 516] Length = 319 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + I+ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAIVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEKPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|302870780|ref|YP_003839416.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] gi|302573639|gb|ADL41430.1| dTDP-glucose 4,6-dehydratase [Caldicellulosiruptor obsidiansis OB47] Length = 316 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 104/309 (33%), Gaps = 54/309 (17%) Query: 3 CLVIGNNGQIAQSLSSM--CVQDVEIIRVGR----------PDI-----------DLLKP 39 LV G G I + ++ +II ++ D++ Sbjct: 4 ILVTGGAGFIGSNFVKYMISKEEYKIINYDALTYAGNLENLKEVENHPYYTFIKGDIVDR 63 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 F ++ D +IN AA + VD++ +P+I N G + + G I I Sbjct: 64 AKVEEVFKNYQIDYVINFAAESHVDRSIKDPDIFVKTNVLGTQVLLDVSRKFGIKKFIQI 123 Query: 99 STDYVFDGLSRTPI-DEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSI 153 STD V+ L E SP P + Y SK + V +Y Y I R + + Sbjct: 124 STDEVYGSLGPEGYFTEESPLAPNSPYSASKAGADMLVRAYFKTYGLPVNITRCSNNFGP 183 Query: 154 FGSN--FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 F+ +++ A + + I + D RAI + Sbjct: 184 HQHPEKFIPTVILNALQDKPIPIYGDGQNIRDWLYVEDHCRAIELVFKKGRIGE------ 237 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC---LDCS 266 ++++ + + D A+ I G P S + + A RP + +D S Sbjct: 238 VYNIGGNNEWKNI-DIAKLILKL---LGKPESLIQFV--------ADRPGHDRRYAIDSS 285 Query: 267 KLANTHNIR 275 K+ + Sbjct: 286 KIQKELGWK 294 >gi|14601230|ref|NP_147763.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] gi|5104852|dbj|BAA80166.1| dTDP-glucose 4,6-dehydratase [Aeropyrum pernix K1] Length = 330 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 117/317 (36%), Gaps = 48/317 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR----------PDI---------DLLKP 39 M+ LV G G I S V D E++ + D+ D+ Sbjct: 1 MRVLVTGGAGFIGSSFVRYIVNTTDWEVLVYDKLTYAGRLENLHDVIDRIGFMRGDIADE 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI--Y 97 + F F PDV++N AA T VD++ +EP N G I +A + + Sbjct: 61 EQFGRVLTEFEPDVVVNFAAETHVDRSINEPAPFMRTNIIGVFTILEAIRKRIDQIVLLH 120 Query: 98 ISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVY 151 +STD V+ L T E P NP + Y SK +G+ + +Y Y I+R Y Sbjct: 121 VSTDEVYGDLWNTGKEATESDPLNPSSPYSASKASGDLLIKAYGRTYGLKYRIVRPCNNY 180 Query: 152 SIFG---SNFLLSMLRLAKERREI-SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSL 207 + +++R+ + + Q ARAI + ++ Sbjct: 181 GPYQHVEKLIPRTIIRILHGKPPVIYGDGSQIRDWLYVEDTARAIHVVLEKGVDGE---- 236 Query: 208 RGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSK 267 I+++ GG S + I E G Y ++ K P + R Y + C K Sbjct: 237 --IYNVC--GGMAS---TVKDIVVNILESMGKPRD-YLVYGKSRPGEDRR--Y-AMKCDK 285 Query: 268 LANTHNIRISTWKEGVR 284 + N T KEG++ Sbjct: 286 IRNLGWAPHVTLKEGLK 302 >gi|300710052|ref|YP_003735866.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] gi|299123735|gb|ADJ14074.1| NAD-dependent epimerase/dehydratase [Halalkalicoccus jeotgali B3] Length = 296 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 91/253 (35%), Gaps = 31/253 (12%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG---------------RPDIDLLKPKDFASF 45 M L+ G G I L V D E+ + + D+ + A Sbjct: 1 MNILITGGAGFIGSHLVDALVADHEVTVLDDFSSGRRSNVHDSATVVEGDVRDEQTIAEA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 DVI + AA +V+++ EPE + ++N + ++ + A C+ S+ V+ Sbjct: 61 AGDV--DVIFHEAASVSVERSVAEPEYSHAVNVDATLSLLETARKRDARCVLASSAAVYG 118 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF-----GS 156 + PI E P P + YG K + ++ Y Y V LR VY S Sbjct: 119 EPASVPIPESEPLAPTSPYGIEKTSIDQYARVYNELYDLPTVALRYFNVYGPRQTAGDYS 178 Query: 157 NFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + L A+ I+V D T + + + +T G + Sbjct: 179 GVISTFLDQARANDPITVHGDG----TQTRDFVH-VEDVVRVNLLAMETDHVGEAYNVGT 233 Query: 217 GGPVSWADFAEYI 229 G V+ A+ A + Sbjct: 234 GDTVTIAELARAV 246 >gi|254387500|ref|ZP_05002739.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294815114|ref|ZP_06773757.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|197701226|gb|EDY47038.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] gi|294327713|gb|EFG09356.1| UDP-glucose 4-epimerase [Streptomyces clavuligerus ATCC 27064] Length = 327 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQ-SLSSMCVQDVEII-----RVGRPD---------IDLLKPKDFASF 45 M+ LV G G + ++ + +++ GR + +D+L + Sbjct: 1 MRVLVTGGAGYVGSFTVRGLAAAGHDVVVADNLSTGRREAVAEHDLRVVDILDTEALRRV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F F PD +I+ AA + + + + + +N G + G+ ++ S+ V+ Sbjct: 61 FQGFRPDAVIHFAALKSSEASLRDITTYYRVNVTGTQNVLGLCAETGVGRFVFSSSCAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 P+DE +P P + YG+SK E +ASY + Y Sbjct: 121 GTPQICPVDESAPVRPESPYGESKYLCERMIASYGRATGMRYANLRY 167 >gi|294494801|ref|YP_003541294.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] gi|292665800|gb|ADE35649.1| NAD-dependent epimerase/dehydratase [Methanohalophilus mahii DSM 5219] Length = 303 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 114/316 (36%), Gaps = 48/316 (15%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFASFFL 47 L+ G GQ+ L+ ++ ++I + R ++ D+ P+ Sbjct: 4 ILITGGLGQVGSYLTDRFCRENKVIVLDNTFSPCRHEVPAGVQLVIGDIQGPEAVRLV-- 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDG 106 DV+I+ AA V+++ ++P N G + +AA IY S+ ++ Sbjct: 62 -GQADVVIHTAAQIDVNRSMEQPMFDCENNILGTLNLLEAARQTNLKRFIYFSSAAIYGE 120 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV----ILRTAWVYSIFGSN----- 157 + P+ E PT PL+ YG SKL GE+ Y + +LR +YS Sbjct: 121 TLQMPVSENHPTQPLSPYGVSKLTGEQYALMYHRAFNLPISVLRPFNIYSPRQDPSNPYS 180 Query: 158 -FLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTAD 216 + + K + + D G T I+ + L+E D ++ +F+ Sbjct: 181 GVITKFIERTKAGQSPVIFGD--GEQTRDFISVHDIVDLVQLLVEKED-AIGKVFN-AGT 236 Query: 217 GGPVS---WADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTHN 273 G S A +++F +++ I +S D S Sbjct: 237 GKQTSVNRLAGIVQHVFDSDLPLEYRQARIGDI------------RHSVADISAAKTLGF 284 Query: 274 IRISTWKEGVRNILVN 289 + + ++G+ + Sbjct: 285 VPKVSLEDGLAEFVKK 300 >gi|167628897|ref|YP_001679396.1| nad-dependent epimerase/dehydratase [Heliobacterium modesticaldum Ice1] gi|167591637|gb|ABZ83385.1| nad-dependent epimerase/dehydratase [Heliobacterium modesticaldum Ice1] Length = 310 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 104/321 (32%), Gaps = 53/321 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVG---------RPD------IDLLKPKDFAS 44 MK LV G G I + C + E++ V P+ +D+ + Sbjct: 1 MKLLVTGGAGFIGSHVVERCIARGDEVLVVDDLSTGKRENIPEKAAFFHLDVAD-DEIKG 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 +P+ II+ AA V + +P N G + +A G I S+ V Sbjct: 60 VIAREAPEAIIHLAAQVDVQVSLRDPLHDARTNILGTLNLLEACRQSGVKRMIVASSAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSML 163 + R P+DE P N YG SK E + Y Y I A ++ N Sbjct: 120 YGDPLRLPVDEEHRLAPANPYGISKHTPEHYLQLYRELYGITGVALRFA----NVYGPRQ 175 Query: 164 RLAKERREISVVCDQFGT---PTSALQIARA---------IIQIAHNLIENSDTSLRGIF 211 A E +++ ++ P + + + L ++ ++ Sbjct: 176 DAAGEGGVVAIFTERLLRGIAPVIYGDGEQTRDFVYVDDVVDAMLLVLEAETEQLRHSVY 235 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKL 268 +++ G S + +F ER G + A RP +S LD +L Sbjct: 236 NVSTGRG-TS----VKALFALIRERVG-------VDLAAQMAPA-RPGDILHSYLDNRRL 282 Query: 269 ANTHNIRISTWKEGVRNILVN 289 + K + L Sbjct: 283 KDAVGWTP---KTALPQGLDQ 300 >gi|312139420|ref|YP_004006756.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] gi|311888759|emb|CBH48071.1| UDP-glucose 4-epimerase [Rhodococcus equi 103S] Length = 331 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 110/319 (34%), Gaps = 55/319 (17%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPDIDLLKPKDF---ASFFL--------- 47 M+ LV G G + ++ + + E++ V D+ A F Sbjct: 1 MRLLVTGGAGYVGSVCTTVLLERGHEVVVVD--DLSTGNADAVPAGAEFIEGDIAAVAGS 58 Query: 48 -------SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIS 99 + D +++ AA + V ++ + PE + N A+ +A G ++ S Sbjct: 59 VLGSGNSTPRFDGVLHFAAQSLVGESVERPEQYWQGNVVTTLALLEAMRLSGTPRLVFSS 118 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-------- 151 T + RTPI E +PT P N YG +KLA + + SY N + + T+ Y Sbjct: 119 TAATYGEPERTPITEDAPTRPTNPYGATKLAIDHAITSYANAHSLAATSLRYFNVAGAYK 178 Query: 152 SIFGSNFLLSMLR------LAKERREISVVCDQFGT--PTSALQIARA--IIQIAHNLIE 201 + + + L +R +ISV + T T+ + +E Sbjct: 179 GAGENRVVETHLIPLVLQVALGQREKISVFGTDWPTKDGTAVRDYIHVLDLADAHLLALE 238 Query: 202 NSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +S I+++ + G + G I + P +A PA Sbjct: 239 SSVPGHHRIYNLGSGAGFT-----VREVISACERVTGL-----PIAAEDAPRRAGDPA-- 286 Query: 262 CL--DCSKLANTHNIRIST 278 L + + R + Sbjct: 287 VLIASSDRAVDELGWRPAH 305 >gi|327267849|ref|XP_003218711.1| PREDICTED: dTDP-D-glucose 4,6-dehydratase-like [Anolis carolinensis] Length = 352 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 67/326 (20%), Positives = 109/326 (33%), Gaps = 56/326 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V+ II + + D D+ Sbjct: 16 RVLVTGGAGFIASHVVVSLVEKYPNYMIINLDKLDYCAHLKNLETVSEKHNYKFVQGDIC 75 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 + F + D++++ AA T VD + +N G + AA ++ I Sbjct: 76 ELNFIKELFETEKIDIVLHFAAQTHVDASFLHSLEFNYVNIYGTYILVGAAYEAKVEKFI 135 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK E V SY Y +I R++ VY Sbjct: 136 YVSTDEVYGGSCDQEFDELSPKKPTNPYASSKAIAECFVQSYWEKYKFPVIITRSSNVYG 195 Query: 153 IFG--SNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + L ++ R+ I Q A A A + I Sbjct: 196 PHQFPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYASDAADAFLTILKKGQPGE----- 250 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSK------VYRIFTKQYPTKAHRPAYSC 262 I+++ + +S A+ + G V T Sbjct: 251 -IYNIGTNS-EISITQLAKELIHLIKNTGSDAETEYWIDYVEDRPTNDLGYP-------- 300 Query: 263 LDCSKLANTHNIRIS-TWKEGVRNIL 287 ++ K+ + R WKEG++ + Sbjct: 301 MNSGKMYD-LGWRPKVPWKEGIKKTI 325 >gi|325336324|gb|ADZ12598.1| dTDP-D-glucose 4,6-dehydratase [Riemerella anatipestifer RA-GD] Length = 361 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 118/346 (34%), Gaps = 73/346 (21%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVE---IIRVGR---------------------PDID 35 MK ++ G G I + V+++ II + D Sbjct: 2 MKSIIITGGAGFIGSHVVREFVKNLPNTKIINLDALTYAGNLENLKDIENEPNYTFERAD 61 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--- 92 + K ++ F PD +++ AA + VD++ +P + N G + Sbjct: 62 ITKVEELRKVFEKHQPDAVVHLAAESHVDRSITDPNAFINTNVMGTANLLNLCREFWTLN 121 Query: 93 --------------IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVAS 137 ++STD V+ L T E +P +P + Y SK A + V + Sbjct: 122 PEHTHGNFPDEPRQNLFYHVSTDEVYGALGETGFFTEETPYDPKSPYSASKAASDHLVRA 181 Query: 138 YTNNY----VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTPTS--ALQIA 189 Y N Y ++ + Y F + + + + + D T + A Sbjct: 182 YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA 241 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA--DFAEYIFWESAERGGPYSKVYRIF 247 +AI QI H +++ GG W D + + + + G + Sbjct: 242 KAIFQIFHEAKTGE------TYNI---GGWNEWQNIDLIKELIKQMDAKLGRPEG----Y 288 Query: 248 TKQYPTKAH-RP----AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 +++ T RP Y+ D +KL + S T++EG+ + Sbjct: 289 SEKLITFVKDRPGHDKRYAI-DATKLNKDLGWKPSVTFEEGLAKTI 333 >gi|313206229|ref|YP_004045406.1| dtdp-glucose 4,6-dehydratase [Riemerella anatipestifer DSM 15868] gi|312445545|gb|ADQ81900.1| dTDP-glucose 4,6-dehydratase [Riemerella anatipestifer DSM 15868] gi|315023085|gb|EFT36098.1| dTDP-glucose 4,6-dehydratase [Riemerella anatipestifer RA-YM] Length = 360 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 118/346 (34%), Gaps = 73/346 (21%) Query: 1 MK-CLVIGNNGQIAQSLSSMCVQDVE---IIRVGR---------------------PDID 35 MK ++ G G I + V+++ II + D Sbjct: 1 MKSIIITGGAGFIGSHVVREFVKNLPNTKIINLDALTYAGNLENLKDIENEPNYTFERAD 60 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG--- 92 + K ++ F PD +++ AA + VD++ +P + N G + Sbjct: 61 ITKVEELRKVFEKHQPDAVVHLAAESHVDRSITDPNAFINTNVMGTANLLNLCREFWTLN 120 Query: 93 --------------IPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVAS 137 ++STD V+ L T E +P +P + Y SK A + V + Sbjct: 121 PEHTHGNFPDEPRQNLFYHVSTDEVYGALGETGFFTEETPYDPKSPYSASKAASDHLVRA 180 Query: 138 YTNNY----VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTPTS--ALQIA 189 Y N Y ++ + Y F + + + + + D T + A Sbjct: 181 YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA 240 Query: 190 RAIIQIAHNLIENSDTSLRGIFHMTADGGPVSWA--DFAEYIFWESAERGGPYSKVYRIF 247 +AI QI H +++ GG W D + + + + G + Sbjct: 241 KAIFQIFHEAKTGE------TYNI---GGWNEWQNIDLIKELIKQMDAKLGRPEG----Y 287 Query: 248 TKQYPTKAH-RP----AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 +++ T RP Y+ D +KL + S T++EG+ + Sbjct: 288 SEKLITFVKDRPGHDKRYAI-DATKLNKDLGWKPSVTFEEGLAKTI 332 >gi|251798141|ref|YP_003012872.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] gi|247545767|gb|ACT02786.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2] Length = 302 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 56/311 (18%), Positives = 102/311 (32%), Gaps = 60/311 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV----------------GRPDIDLLKPKDFAS 44 MK LV G G I L+ VQ ++ V ++D+ + Sbjct: 1 MKALVTGGAGFIGSHLTDALVQSGAVVHVIDNLSTGFIHNVHPEAVLHELDINSDEAL-Q 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 PD++ + AA V + +P +N G + A + ++ ST V Sbjct: 60 IIKQVKPDIVFHMAAQVDVQCSVADPAFDSLVNIVGTIRLMMACRQAEVGKLVFSSTSAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS--- 156 + ++ E + T P++ YG SKL GE + + Y ILR + VY + Sbjct: 120 YGDANKERNSEDAVTAPISYYGLSKLTGENYIRLFHKMYGLPYTILRYSNVYGPRQNASG 179 Query: 157 --NFLLSMLRLAKERREI--SVVCDQFGTPTSALQIARAIIQIAHN-------LIENSDT 205 + + K+ + + +Q + +A + H+ + T Sbjct: 180 EGGVVSIFMNKLKQGHPLHVNGSGNQTRDFIYVQDVVQANLAAIHHGDQETVNISTGLRT 239 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDC 265 S+ + HM + I ++ + + I SCLD Sbjct: 240 SINNLIHMV------------KLIHGQNVDIAYGPERPGDIM------------DSCLDN 275 Query: 266 SKLANTHNIRI 276 +K R Sbjct: 276 TKANQLLGWRP 286 >gi|28377576|ref|NP_784468.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] gi|28270408|emb|CAD63311.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] Length = 331 Score = 127 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV-EIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I + V+ +++ V R + DL Sbjct: 1 MSILVLGGAGYIGSHMVDRLVEHGTDVVVVDNLVTGHRAAVNSAAKFYQGDLRDADFLNH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ +P F N G + + + + ++ ST Sbjct: 61 VFDTEDIEAVVHFAAFSIVPESMSKPLKYFDNNTGGMITLLETMQAHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P+N YG SKL E+ + Y I A Y Sbjct: 121 YGTPKQIPIKETDPQLPINPYGASKLMMEQIMHWADVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAI 192 + + +R E+ + D + TP T+ + Sbjct: 181 GEDHGPETHLVPIILQVAQGKRDELKIFGDDYNTPDGTNVRDYVHVV 227 >gi|300172674|ref|YP_003771839.1| UDP-glucose 4-epimerase [Leuconostoc gasicomitatum LMG 18811] gi|299887052|emb|CBL91020.1| UDP-glucose 4-epimerase [Leuconostoc gasicomitatum LMG 18811] Length = 330 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 113/333 (33%), Gaps = 64/333 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ + Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVESGRDVVVVDALFTGHRDAVNPAAKFYQVDIRNKTALSD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA++ V ++ P F N G + + + ++ ST Sbjct: 61 VFDKENIEQVVHFAAFSIVPESVANPLKYFDNNTSGMITLLEVMKDHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG+SKL E+ +A + + A Y Sbjct: 121 YGNPVNIPIKETDPQNPINPYGESKLMMEKIMAWSDKSDGVKWVALRYFNVAGAAEDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + + +R I + D + TP L +A A I+ L Sbjct: 181 GEDHTPETHLVPIILQAGLGQREYIEMFGDDYKTPDGFNVRDYVHVLDLADAHIRALKYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 + +++ + G + F+ E+A I +K P +A P Sbjct: 241 ADGHESNQF-------NLGSAT--GFSVKEMVEAAREATGVD----IPSKIGPRRAGDPD 287 Query: 259 ---AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 A S K + + V++I+ Sbjct: 288 ILIANS----DKARDVLGWAPKY--DNVQDIIK 314 >gi|217967734|ref|YP_002353240.1| UDP-glucose 4-epimerase [Dictyoglomus turgidum DSM 6724] gi|217336833|gb|ACK42626.1| UDP-glucose 4-epimerase [Dictyoglomus turgidum DSM 6724] Length = 329 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 88/254 (34%), Gaps = 39/254 (15%) Query: 3 CLVIGNNGQIAQSLS-SMCVQDVEIIRVG--------------RPDIDLLKPKDFASFFL 47 LV G G I + + ++ +++ + +DL K F Sbjct: 4 ILVTGGAGYIGSHVVKELLRRNYKVVVLDNLHKGHKKAVLTPYFEIVDLKKMDSLREVFE 63 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 + D +++ AA + V ++ EP + N G + + I I+ ST V+ Sbjct: 64 KYDIDAVMHFAALSTVAESMKEPFKYYENNILGGLNLLELMREYNIKYFIFSSTAAVYGE 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFLLSM 162 PI E P NP N+YG SKL EE ++ Y Y + + Y L Sbjct: 124 PQVVPIPEDHPKNPTNVYGSSKLMFEEILSWYDEIYKLRYVSLRYFNAAGADLEGELGED 183 Query: 163 LR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDTSLR 208 R +R I + + TP T ++ +A I + Sbjct: 184 HRPETHLIPIVLKTALGQREYIEIYGTDYPTPDGTCIRDYIH-VVDLAEAHILALEALFD 242 Query: 209 G----IFHMTADGG 218 G +F++ + G Sbjct: 243 GMRSEVFNLGNERG 256 >gi|251792406|ref|YP_003007132.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] gi|247533799|gb|ACS97045.1| dTDP-glucose 4,6-dehydratase [Aggregatibacter aphrophilus NJ8700] Length = 349 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 43/241 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 M+ L+ G G I +L +Q DV ++ V + +D+ Sbjct: 1 MQILITGGAGFIGSALIRYLIQTTDVRVVNVDKLTYAANLASLETISDNPRYIFEQLDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------ 91 A F+ + PD +++ AA + VD++ D P N G ++ +AA Sbjct: 61 DSNALARLFMQYQPDCVVHLAAESHVDRSIDGPSAFIQSNIVGTYSLLEAARHYYYTLSA 120 Query: 92 ----GIPCIYISTDYVFDGLSRTPI--DEFSPTNPLNIYGKSKLAGEEKVASYTNNY--- 142 +++STD V+ + E SP P + Y SK + + V ++ Y Sbjct: 121 EKQAAFRFLHVSTDEVYGDTAGETTLSTETSPYAPSSPYSASKASADHLVRAWHRTYGLP 180 Query: 143 -VILRTAWVYSIFGSNFLLSMLRLAKERR----EISVVCDQFGTPTSALQIARAIIQIAH 197 +I A Y + L L +A I Q RA+ + Sbjct: 181 TMITHCANNYGPYQYKEKLIPLMIANALDGKPLPIYGNGQQIRDWLYVDDHVRALYLVLT 240 Query: 198 N 198 Sbjct: 241 Q 241 >gi|288941681|ref|YP_003443921.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] gi|288897053|gb|ADC62889.1| UDP-glucose 4-epimerase [Allochromatium vinosum DSM 180] Length = 323 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 96/319 (30%), Gaps = 59/319 (18%) Query: 3 CLVIGNNGQIAQS-LSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASFFL 47 LV G G I ++ I + D+ + Sbjct: 4 VLVTGGAGYIGSHTCKALACAGYRPITLDNLVYGHEWAVRWGPLEIGDISDRACLDAVIE 63 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVFDG 106 P+ +I+ AAY V ++ +P + N G + +A IP ++ ST + Sbjct: 64 RHRPEAVIHFAAYAYVGESVRDPGRYYRNNVAGTLTLLEAMRDHAIPHIVFSSTCATYGI 123 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------------- 151 RTPI E P P+N YG SKL E +A + + + A Y Sbjct: 124 PDRTPITEDHPQRPINPYGASKLMVERMLADFEQAHGLGWIALRYFNAAGADPEGEVGED 183 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 L++ A ++ V D + PT R I +A + ++ +R + Sbjct: 184 HDPETHLIPLALQAAAGRGPQLQVFGDDY--PTPDGSCIRDYIHVA----DLAEAHVRSL 237 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---------PAYS 261 H+ A G F +G +V + R P Sbjct: 238 AHLRAGEG--------SGAFNLGTGQGASVLEVIAAAERVTGRPVPRAIGPRRPGDPP-- 287 Query: 262 CL--DCSKLANTHNIRIST 278 L D K Sbjct: 288 VLYADADKARRLLGWEPRY 306 >gi|163814680|ref|ZP_02206069.1| hypothetical protein COPEUT_00831 [Coprococcus eutactus ATCC 27759] gi|158450315|gb|EDP27310.1| hypothetical protein COPEUT_00831 [Coprococcus eutactus ATCC 27759] Length = 338 Score = 127 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 46/256 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEII-----------RVGR-----------PDIDLL 37 MK LV G G I + +++ + R + D+L Sbjct: 1 MKILVTGGAGYIGSHTCVELLNAGYDVVVIDNLYNASEKAIDRIKEITGKDVTFYETDIL 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CI 96 + F PD +I+ A AV ++ +P + N G + + G I Sbjct: 61 DKEAMDKIFAEEKPDCVIHFAGLKAVGESVVKPLEYYQNNITGTLNLCEVMRKNGCKNII 120 Query: 97 YISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWV 150 + S+ V+ + PI E P P N YG +K E+ + N ++LR Sbjct: 121 FSSSATVYGNPAFIPITEECPKGTPTNPYGWTKWMIEQILTDLHTADPEWNVILLRYFNP 180 Query: 151 YSIFGSNFLLSMLR-------------LAKERREISVVCDQFGTP--TSALQIARAI-IQ 194 S + + + + + V D + TP T + + Sbjct: 181 IGAHKSGLIGEDPKGIPNNLLPYVAQVAIGKLQSVGVFGDDYDTPDGTGVRDYIHVVDLA 240 Query: 195 IAHNLIENSDTSLRGI 210 + H N G+ Sbjct: 241 VGHVKAVNKIKENPGV 256 >gi|119490781|ref|ZP_01623113.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] gi|119453765|gb|EAW34923.1| UDP-glucose 4-epimerase [Lyngbya sp. PCC 8106] Length = 397 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 103/313 (32%), Gaps = 56/313 (17%) Query: 6 IGNNGQIAQSLSSMCVQ--DVEIIRVG-----------RPDI---DLLKPKDFASFFLSF 49 G G I + + E++ ++ DL + F Sbjct: 2 TGGAGYIGSHVVKQLGREIGYEVVVYDNLSTGSQTAVLYGELVVGDLEDKQKLDQVFAEH 61 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLS 108 D +++ AA +V ++ P + N + + + G ++ ST V+ Sbjct: 62 QFDAVLHFAASISVPESTANPLAYYGNNTRNTLNLLQCCEKYGVKKLVFSSTAAVYGETV 121 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSNFLLSMLR 164 P+ E +PT P+N YG SKL E+ + Y+ YVILR V + + + Sbjct: 122 ENPVRESTPTAPINPYGYSKLMSEQMIKDYSQASGLKYVILRYFNVAGADLNGRIGQSNK 181 Query: 165 LA------------KERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIENSD 204 A R+ +S+ F TP +A A + L E+ + Sbjct: 182 KASHLIKVAIDAALNRRQSVSIFGTDFPTPDGTGIRDYIHVEDLAAAHLDALRYLQEDHE 241 Query: 205 TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLD 264 + IF+ G + + + E G V I +A P + Sbjct: 242 SQ---IFNCGYGQGYS-----VKEVLAKVKEFSGVNFPVIEIE-----RRAGDPG-CVIA 287 Query: 265 CS-KLANTHNIRI 276 CS K+ + Sbjct: 288 CSDKIRQILGWKP 300 >gi|84684394|ref|ZP_01012295.1| dTDP-glucose 4,6-dehydratase [Maritimibacter alkaliphilus HTCC2654] gi|84667373|gb|EAQ13842.1| dTDP-glucose 4,6-dehydratase [Rhodobacterales bacterium HTCC2654] Length = 346 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 82/248 (33%), Gaps = 39/248 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + + E++ + +D+ Sbjct: 1 MKILVTGGAGFIGSAVVRLAISRGQEVVNLDALTYAACLDNVASVADAPGYAFEQVDIRD 60 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG------ 92 PD I++ AA + VD++ D P N G + +AA S Sbjct: 61 RPALDRVLSDHRPDAIMHLAAESHVDRSIDGPATFIETNVMGTFNLLEAARSYWDGQGRD 120 Query: 93 --IPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VIL 145 +ISTD VF L E SP +P + Y SK + + V ++ Y V+ Sbjct: 121 PAFRFHHISTDEVFGSLGPEGQFTEESPYDPRSPYSASKASSDHLVRAWHETYGLPVVLT 180 Query: 146 RTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIE 201 + Y + + ++ A I + D A A++ + Sbjct: 181 NCSNNYGPYHFPEKLIPIVILKALAGEPIPIYGDGSNVRDWLYVEDHADALLLVLEEGAI 240 Query: 202 NSDTSLRG 209 ++ G Sbjct: 241 GRSYNIGG 248 >gi|78061717|ref|YP_371625.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] gi|77969602|gb|ABB10981.1| UDP-galactose 4-epimerase [Burkholderia sp. 383] Length = 329 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 16/167 (9%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIR-----VGRPDI---------DLLKPKDFASF 45 MK LV G G I ++ E + G D D+L + Sbjct: 1 MKVLVTGGAGYIGSHTCKALAAAGHEPVAYDNLSTGHRDAVRWGPLVTADILDRDALSKA 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 F + PDV+I+ AA V + P+ +++N G + A + G+ + S+ + Sbjct: 61 FAAHRPDVVIHFAALAYVGDSVLAPDRYYTVNVTGTCMLLSAMHAAGVGRIVMSSSCATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 PI E +P P+N YG +K A E A + Y + A Y Sbjct: 121 GIPDGLPISERTPQRPINPYGFTKYAMERMAADFERAYGLKWVALRY 167 >gi|195953942|ref|YP_002122232.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] gi|195933554|gb|ACG58254.1| dTDP-glucose 4,6-dehydratase [Hydrogenobaculum sp. Y04AAS1] Length = 330 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 62/319 (19%), Positives = 108/319 (33%), Gaps = 46/319 (14%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR----------PDI---------DLLKPK 40 MK LV G G I + EI+ V + ++ D+ + Sbjct: 1 MKLLVTGGAGFIGSEFVRKAVKRGYEIVVVDKLTYAGDLERLKEVKENITFYKADITNKE 60 Query: 41 DFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIS 99 F + P V+I+ AA + VD++ + N EG + A IG I I+ Sbjct: 61 FIEHIFKTEKPKVVIHFAAESHVDRSILDASPFIKTNVEGTQVLLDVAKDIGVEKFINIA 120 Query: 100 TDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIF 154 TD V+ L + E SP P + Y SK A + +Y Y + +R + Y + Sbjct: 121 TDEVYGELGQEGTFKEDSPLVPNSPYSSSKAAADMLGRAYYKTYKLPVITVRPSNNYGPW 180 Query: 155 GSNFLLSMLRLAK----ERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI 210 L + + K E+ + A AI +I I Sbjct: 181 QYPEKLIPVVILKALNNEKIPVYGTGQNVREWLYVSDCAEAIFEIMEKGKIGE------I 234 Query: 211 FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLAN 270 +++ ++ + D + I + V + YS L +K+ N Sbjct: 235 YNVGSNQERRNI-DVVKNILKLLHKNEDLIEFVKDRPGHDF-------RYS-LGTTKIKN 285 Query: 271 THNIRI-STWKEGVRNILV 288 +T++EG+ + Sbjct: 286 ELGWEAKTTFEEGIEKTVK 304 >gi|284047225|ref|YP_003397565.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] gi|283951446|gb|ADB54190.1| dTDP-glucose 4,6-dehydratase [Conexibacter woesei DSM 14684] Length = 331 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 111/320 (34%), Gaps = 54/320 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV--EIIRVG-----------RPDID--------LLKP 39 MK LV G G I + + V++ +++ + +D + P Sbjct: 1 MKLLVCGGAGFIGSNFVRIRVKEHGDDVVVLDKLTYAGRRENLHDVLDDIRFVHGAIEDP 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYIS 99 A D ++N AA T VD++ EP+ N +G + +AA + G+ + IS Sbjct: 61 AAVADAIAGV--DAVVNFAAETHVDRSIAEPDAFVVTNGQGTYVLLEAARAAGVRYVQIS 118 Query: 100 TDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFG 155 TD V+ + E SP P + Y +K + V SY + Y VI R + Y + Sbjct: 119 TDEVYGSIEEGSFTEESPLQPSSPYSATKTGADLLVTSYFHTYGLETVICRGSNNYGPYQ 178 Query: 156 SNFLLSMLRLAKE--RREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIF 211 L L + ++ V D Q R I + + ++ Sbjct: 179 YPEKLIPLMVLNALHGDKLPVYGDGMQVRNWLYVTDFGRGIGHVLEHGNPGE------VY 232 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP----AYSCLDCSK 267 ++ + E + A G S + +Y T RP YS L K Sbjct: 233 NVGGPDECPNI----EVVKRIVAATGNDESLI------EYVT--DRPGHDRRYS-LASEK 279 Query: 268 LANTHNIRISTWKEGVRNIL 287 L + EG+ + Sbjct: 280 LRALGWEAQVHFAEGLEQTV 299 >gi|227513959|ref|ZP_03944008.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] gi|227087670|gb|EEI22982.1| dTDP-glucose 4,6-dehydratase [Lactobacillus fermentum ATCC 14931] Length = 310 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 108/314 (34%), Gaps = 55/314 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE---IIRVG----------RPDI-----------DL 36 M LV G G I + ++ + D+ D+ Sbjct: 1 MNILVTGGAGFIGSHFLRYQLSHYPADRVVNLDCLTYAGNLANVADLASNPRYHFIQGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI 96 + + DV++N AA + VD++ ++P S N G + A + + Sbjct: 61 RDAATVSEVLTTHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRARVRLV 120 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 +STD V+ ++ DE +P P + Y +K + + + + + VI R+A Y Sbjct: 121 QVSTDEVYGSIAAGRADEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYG 180 Query: 153 I--FGSNFLLSMLRLAKERREISV--VCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + ++ A+++R +++ D + +AI + + Sbjct: 181 PNQHPEKLVPMIITNARQQRPLTIQGTGDDIRDWLYVVDNCQAIDLVMRKGVAGE----- 235 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYSCLD 264 ++++ E + A G P S+V + A R Y+ D Sbjct: 236 -VYNIGGFERRT----VLEVVASLQALLGFPASQVVHV--------AERLGHDHRYAV-D 281 Query: 265 CSKLANTHNIRIST 278 +KL R ST Sbjct: 282 DTKLRRALGWRPST 295 >gi|292669665|ref|ZP_06603091.1| UDP-glucose 4-epimerase [Selenomonas noxia ATCC 43541] gi|292648462|gb|EFF66434.1| UDP-glucose 4-epimerase [Selenomonas noxia ATCC 43541] Length = 359 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/321 (18%), Positives = 99/321 (30%), Gaps = 60/321 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRP----------DIDLLKPKDFAS 44 M LV G G I V+ E + V G + D+ Sbjct: 31 MAVLVCGGAGYIGSHAVHALVEKGEEVAVIDNLQTGHRGALHPEARFYEGDIRSAAALDR 90 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +++ AA + V ++ ++P + F+ N G + +A ++ ST V Sbjct: 91 IFTENEVDAVVHFAANSLVGESMEKPLLYFNNNVYGMQVLLEAMVRHSVDKIVFSSTAAV 150 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + R PI E T P N YG++KL E+ + + I + Y + + Sbjct: 151 YGEPKRVPIREEDETKPTNAYGETKLTMEKMMKWISRASGIRYVSLRYFNAAGALPNGVI 210 Query: 160 LSMLRLA------------KERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 +R I+V D + TP + +A A ++ L Sbjct: 211 GEDHATETHLIPLILQVPNGKRDHITVYGDDYPTPDGTCLRDYIHVVDLADAHVRALEYL 270 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR-- 257 ++ IF++ + G E I G V A R Sbjct: 271 RSGGESD---IFNLGSGQG----FSVKEMIAAAEKATGRSIKAVI---------GARRAG 314 Query: 258 -PAYSCLDCSKLANTHNIRIS 277 PA K R Sbjct: 315 DPAQLVAASDKARAVLGWRPR 335 >gi|237738924|ref|ZP_04569405.1| UDP-glucose 4-epimerase [Fusobacterium sp. 2_1_31] gi|294781832|ref|ZP_06747164.1| UDP-glucose 4-epimerase [Fusobacterium sp. 1_1_41FAA] gi|229424027|gb|EEO39074.1| UDP-glucose 4-epimerase [Fusobacterium sp. 2_1_31] gi|294481643|gb|EFG29412.1| UDP-glucose 4-epimerase [Fusobacterium sp. 1_1_41FAA] Length = 329 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------RPDI-DLLKPKDFAS 44 M LV G G I + + ++ +++ V ++ DL + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDEKAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLKVMKAHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y + S + Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 +R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + +F++ G + + + + G + I + P +A PA Sbjct: 241 RNGGDSQVFNLGNGEGFS-----VKEVIEVTRKVTG-----HPIPAEVSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K +T Sbjct: 289 LIASSQKALDTLKWVP 304 >gi|89097009|ref|ZP_01169900.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] gi|89088389|gb|EAR67499.1| UDP-glucose 4-epimerase [Bacillus sp. NRRL B-14911] Length = 329 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 112/329 (34%), Gaps = 54/329 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I ++ + Q+ E + V PD D+ + S Sbjct: 1 MSILVLGGAGYIGSHAVYQLIDQNYEAVVVDSLETGHREAVHPDAKFYQGDIRDKEFLRS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S D +++ AA + V ++ + P F+ N G + + + + ++ ST Sbjct: 61 VFEKESIDGVLHFAANSLVGESMENPLKYFNNNVYGTQVLLEVMNEFDVKNIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + PI E NP N YG++KL E+ + A++ YV LR V + + Sbjct: 121 YGEQKTMPITEEMSANPTNAYGETKLTMEKIMKWCEAAHDLKYVSLRYFNVAGARPTGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + +R IS+ D + T T I +L+ Sbjct: 181 GEDHQPETHLIPIILQVALGQREHISIFGDDYDTEDGTCIRDYIHVEDLIGAHLLALQYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G I ++ + G S + E + + +KV + P S Sbjct: 241 QNGGKSEIINLGSGQGF-SVKEMIEAVREVTGHE--IPAKVVPRRSGD-------P--ST 288 Query: 263 L--DCSKLANTHNIRISTWKEGVRNILVN 289 L K + ++ I+ + Sbjct: 289 LIASSEKAKTVLGWNPQ--RTSIKQIIED 315 >gi|92118499|ref|YP_578228.1| UDP-glucose 4-epimerase [Nitrobacter hamburgensis X14] gi|91801393|gb|ABE63768.1| UDP-galactose 4-epimerase [Nitrobacter hamburgensis X14] Length = 349 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 108/316 (34%), Gaps = 58/316 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI---------DLLKPKDFASFFL 47 LV G G I + + G D+ P+ + F Sbjct: 7 VLVTGGAGYIGSHCCKALAEAGYRPVCFDNFSTGHRRFVKWGPMITGDVRDPRQLQAVFQ 66 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 S+ +++ AA ++V ++ +P+ ++ N G A+ A G ++ ST V+ Sbjct: 67 SYDFSAVMHFAASSSVGESVTDPQKYYANNVGGTLALLSAMRGAGSGRLVFSSTGAVYGN 126 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------------- 151 E +P P+N YGKSKL EE ++ Y Y + + Y Sbjct: 127 AG----SESAPRFPVNPYGKSKLMIEEILSDYRQAYDLNSVCFRYFNASGADACGAIGEC 182 Query: 152 -SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENSDTS 206 +M+ L E + + D + TP T+ ++ + Sbjct: 183 RDPETHLIPRAMMALQGEIPDFGIFGDDYDTPDGTAVRDYIHVTDLVSAHVQAVNMLMGG 242 Query: 207 LRGIFHM-TADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL- 263 +RG++++ T G VS + IF E+ G +VY YP RP S L Sbjct: 243 MRGVYNLGTGVGYSVS--EVLSAIFAEA---GSKMPRVY------YP---RRPGDPSVLI 288 Query: 264 -DCSKLANTHNIRIST 278 D S Sbjct: 289 ADSSVARMHLGFNPIH 304 >gi|225679462|gb|EEH17746.1| methionine adenosyltransferase 2 subunit beta [Paracoccidioides brasiliensis Pb03] Length = 344 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 114/342 (33%), Gaps = 62/342 (18%) Query: 3 CLVIGNNGQIA--------------QSLSSMCVQDVEIIRVGRPDI-----DLLKPKDFA 43 L+ G G + +++ + D DL + Sbjct: 5 VLITGATGLLGGQGPNAFERNSLNWKTIGKGFSRAGPGTAASETDAEIIKADLTDESEIV 64 Query: 44 SFFL-------SFSPDVII------------NP--AAYTAVDKAEDEPEIAFSINAEGAG 82 + +P+V++ N AA DK + + + A IN Sbjct: 65 ALLGPTKILIFKITPNVLLPERKSNSSSLMPNLPGAANRFPDKCDLDQDAARKINVAATK 124 Query: 83 AIAKAADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNN 141 ++A+ + I IYISTDYVF G P + + T P NIYG++K GE V T Sbjct: 125 SLARETSARSILLIYISTDYVFPGKPDEAPYEVSAKTEPPNIYGETKRDGEIAVLEETRQ 184 Query: 142 Y---VILRTAWVYSIFGS------NFLLSMLRLAKE-RREISVVCDQFGTPTSALQIARA 191 V+LR +Y N L+ + A++ I + PT + R Sbjct: 185 SALGVVLRVPVLYGPTKQNSESAVNVLVDAVWKAQDVNAGIKMDDWAIRYPTHTADVGRV 244 Query: 192 IIQIAHNLIENSD--TSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTK 249 IA + + + +L I +++ + + + G P + + Sbjct: 245 CHDIAVKYLGDEEDVKALPRILQFSSEDRMTK-YEICQ---KLAEILGLPLPGMIPVKEG 300 Query: 250 QYPTKAHRPAYSCLDCSKLANTH-NIRIST----WKEGVRNI 286 P + RP + L +L + + W+ +R Sbjct: 301 PKPGEVQRPYDTHLSTRELQRIGIGVETQSFIAWWRRELRAF 342 >gi|218441151|ref|YP_002379480.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] gi|218173879|gb|ACK72612.1| UDP-glucose 4-epimerase [Cyanothece sp. PCC 7424] Length = 332 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 56/320 (17%), Positives = 99/320 (30%), Gaps = 62/320 (19%) Query: 3 CLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RPDI------------DLLKPKDFAS 44 LV G G I ++ ++ +I + DI D+ Sbjct: 8 ILVTGGAGYIGSHAVKALQQAGYGVIVLDNLVYGHRDIAEKVLEAELIVGDISDRPFLDD 67 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYV 103 F + +++ AAY V ++ +P + N G + +A + ++ ST Sbjct: 68 LFSRYPIAAVMHFAAYAYVGESVSDPAKYYRNNVMGTLTLLEAMVAANVKRIVFSSTCAT 127 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + P+ E P NP+N YG +KL E+ +A + Y + + Y Sbjct: 128 YGVPQFMPLTEDHPQNPINPYGSTKLMVEKILADFDRAYGLKSVCFRYFNAAGADPEGKL 187 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L +L R IS+ + TP + +A A I L Sbjct: 188 GEDHQPETHLIPLVLLTALGRRDAISIFGTDYPTPDGTCIRDYIHVVDLADAHILGLEYL 247 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 +E +++ IF++ G + + G KV RP Sbjct: 248 LEGEESN---IFNLGNGNGFS-----VREVIETAKTVTGKSIKVLECD--------RRPG 291 Query: 260 Y-SCL--DCSKLANTHNIRI 276 L K + Sbjct: 292 DPPVLVGSSEKAQKILGWQP 311 >gi|227825088|ref|ZP_03989920.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] gi|226905587|gb|EEH91505.1| UDP-glucose 4-epimerase [Acidaminococcus sp. D21] Length = 328 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/330 (17%), Positives = 107/330 (32%), Gaps = 60/330 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPDI----------DLLKPKDFAS 44 M LV G G I + ++ + G + DL Sbjct: 1 MNVLVTGGAGYIGSHVIDDLIKSGYTPIVYDNFSTGHAEAVPETVQLIQGDLHDFTFLKH 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 + D +++ AA + V ++ +P + N G + A G ++ ST V Sbjct: 61 IMGQYEIDAVLHFAASSQVGESMVDPGKYYYNNVAGTLGLLDAMRESGVEYIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P +P N YG++KL E + Y+ Y + A Y Sbjct: 121 YGEPDQVPITEDMPLHPTNSYGRTKLMIENMLRDYSMAYGLHYVALRYFNAAGASLLGNI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + L++ +R IS+ + TP +A A I ++L Sbjct: 181 GEDHNPETHLIPLTIQAALGKRDAISIFGTDYDTPDGTCLRDYIHVKDLASAHILALNHL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 ++ + ++++ G I E G V + +A PA Sbjct: 241 VKGGASR---VYNLGTKTGLS-----VREIINAVKEVTGRDFMVK-----EEKRRAGDPA 287 Query: 260 YSCL--DCSKLANTHNIRISTWKEGVRNIL 287 L K+A + + V+ I+ Sbjct: 288 --RLIASSEKIAKELHWKPEH--SSVKEIV 313 >gi|313117360|ref|YP_004044343.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] gi|312294251|gb|ADQ68682.1| dTDP-glucose 4,6-dehydratase [Halogeometricum borinquense DSM 11551] Length = 307 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 106/319 (33%), Gaps = 49/319 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVG------------------RPDI---DLL 37 M+ LV G G I + ++ D E++ + R + D+ Sbjct: 1 MRILVTGGAGFIGSNFVHYVIEQYDDEVVTLDALTYAGSKENLEGVLDNPRHEFIEGDIR 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCI 96 + D ++N AA + VD++ + + N +G + AA G + Sbjct: 61 DEELVRDLVADV--DTVVNFAAESHVDRSIEGAKPFVETNVQGTQTLLDAAKDSGIERFL 118 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 ISTD V+ + E P NP N Y +K + + S+ + +I RT + Sbjct: 119 QISTDEVYGQILDGKFSEDDPLNPRNPYSATKASADHLAKSFETTHDLPVLITRTCNNFG 178 Query: 153 I--FGSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + ++ A E + + V D A RA+ + + + Sbjct: 179 PRQHPEKLIPKFIKNASEGKSLPVYGDGSNVREWIYAEDNCRALDTVLR------EGEIG 232 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKL 268 I+++ + + + E I V R Y L+ K+ Sbjct: 233 EIYNIGSHAEKTN-LEVTEAILDAVGADKALIEFVEDRAGHD-----QR--Y-ALETEKI 283 Query: 269 ANTHNIRISTWKEGVRNIL 287 + T++EG+ + Sbjct: 284 ESLGWEPAYTFEEGLEETV 302 >gi|153808769|ref|ZP_01961437.1| hypothetical protein BACCAC_03069 [Bacteroides caccae ATCC 43185] gi|149128595|gb|EDM19813.1| hypothetical protein BACCAC_03069 [Bacteroides caccae ATCC 43185] Length = 355 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 54/339 (15%), Positives = 111/339 (32%), Gaps = 64/339 (18%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVE---IIRVGR--------------PDI----------- 34 LV G G I +L + + + +I + ++ Sbjct: 13 VLVTGAAGFIGANLVKRLLAEFDSIKVIGIDSITEYYDVRLKYERLEELSVYGDRFVFIK 72 Query: 35 -DLLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 ++ K + S F ++ P V++N AA V + P+ N G I +A G Sbjct: 73 DNIAKKEIVESAFTNYRPQVVVNLAAQAGVRYSITNPDAYIESNLIGFYNILEACRHYGV 132 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAWV- 150 +Y S+ V+ + P NP+++Y +K + E +Y+ Y I T Sbjct: 133 EHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTGLRF 192 Query: 151 YSIFGSNFLLSMLRLAKERREISVVCDQFGT-------PTSALQIARAIIQIAHNLIENS 203 ++++G M + + + Q T I +++I + E Sbjct: 193 FTVYGPCGRPDMAYFSFTNKLLKGETIQVFNYGNCKRDFTYVDDIVEGVVRIMQHAPEKK 252 Query: 204 DTS------LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS--------KVYRIFTK 249 + ++++ + + DF + E G + K+ + Sbjct: 253 NGDDGLPIPPYKVYNIGNNSPE-NLLDFVTILQDELIRAGVLPNDYDFESHKKLVPMQPG 311 Query: 250 QYP-TKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 P T A D + L + ++ + G+R Sbjct: 312 DVPVTYA--------DTTPLEQDFGFKPSTSLRVGLRKF 342 >gi|323705072|ref|ZP_08116648.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535498|gb|EGB25273.1| UDP-glucose 4-epimerase [Thermoanaerobacterium xylanolyticum LX-11] Length = 329 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 60/328 (18%), Positives = 105/328 (32%), Gaps = 57/328 (17%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG-----RPDI---------DLLKPKDFASF 45 M LV G G I + + + ++I V D+ + Sbjct: 1 MSILVCGGAGYIGSHTAYELFKRGEDVIVVDSLITGHEKAVIGGKLYVGDIRDSEFMDKV 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVF 104 F + +I+ AA++ V ++ +P + N G + K G ++ ST + Sbjct: 61 FEENDIEAVIDFAAFSLVGESVGKPLDYYENNVYGTMCLLKKMVKYGVKKIVFSSTAATY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFLL 160 R PI E T P N YG++KLA E+ + +Y +V+LR V S + Sbjct: 121 GEPERVPIKEDDKTFPTNPYGETKLAVEKMLKWCDNAYGIKHVVLRYFNVAGADESGVIG 180 Query: 161 SMLR------------LAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDT- 205 +R + + D + T T +A I D Sbjct: 181 EDHNPETHLIPLILQVPLGKRDFVEIYGDDYDTKDGTCVRDYIHVT-DLADAHILALDKL 239 Query: 206 ---SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-S 261 S I+++ G + + + + G + I K A RP + Sbjct: 240 RRDSSSAIYNLGNGEGFT-----VKEVVETARKVTG-----HPIPAK---IAARRPGDPA 286 Query: 262 CL--DCSKLANTHNIRISTWKEGVRNIL 287 L K+ N + I+ Sbjct: 287 KLVASSDKIINELGWNPKH--NSLEEII 312 >gi|262193435|ref|YP_003264644.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365] gi|262076782|gb|ACY12751.1| dTDP-4-dehydrorhamnose reductase [Haliangium ochraceum DSM 14365] Length = 281 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 20/223 (8%) Query: 4 LVIGNNGQIAQSLSSMCVQ------DVEIIRVGRP--DIDLLKPKDFASFFLSFSPDVII 55 ++ G + + S + + GRP ++L A+ F PD+++ Sbjct: 1 MLFGASSIVGWSFVRALPEVQAFCNRHTRLPAGRPWGRVNLQDRDRVAALFAREQPDMVL 60 Query: 56 NPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFDGLSRTPIDEF 115 + A V K E+ P+ A +N + + IY+S+D+VF G S P E Sbjct: 61 HCAGVCDVAKCEESPDFAHLVNVLSMDILLDHLPAH-TRVIYLSSDHVFSGDS-GPYTES 118 Query: 116 SPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLRLA---KERREI 172 +P +PL++YG++++ E + + +I+R + L + L + Sbjct: 119 TPPDPLSVYGRTRVQAERILLDRRPDSLIIRGGLWIGPSYNGRLGHLDWLRYRHARGLPM 178 Query: 173 SVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTA 215 +V+ D+ + A ++ +A + + G H++A Sbjct: 179 TVITDEHRSAVWADDAVARVMALA-------EAGVSGTRHLSA 214 >gi|228996406|ref|ZP_04156048.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] gi|228763369|gb|EEM12274.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase [Bacillus mycoides Rock3-17] Length = 304 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/308 (21%), Positives = 106/308 (34%), Gaps = 54/308 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP----------DIDLLKPKDFAS 44 MK LV G G I + +++ V+ + G D+ P Sbjct: 1 MKVLVTGGAGFIGSHIVEFLLENNIDTVVVDNLVTGHKYNIPSKVAFYHFDIRDPN-IDK 59 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F+ PD +I+ AA +V ++ +P S N I +A IY ST V Sbjct: 60 IFMVEKPDFVIHQAAQVSVQESVKQPFYDCSENVMATVNILQACIKYNVKKIIYASTAAV 119 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PIDE NP++ YG SKL E + Y Y ILR + VY + Sbjct: 120 YGNPQYLPIDEKHDLNPVSFYGLSKLTSEAYIQLFAKLYGLKYTILRYSNVYGARQNPD- 178 Query: 160 LSMLRLAKERREISVVCDQFG---TPTSALQIAR-----AIIQIAHNLIENSDTSLRGIF 211 E IS+ D+ +P + + +AH + I Sbjct: 179 -------GEAGVISIFMDRLFKNDSPIIYGDGNQTRDFIFVKDVAHANFLAFRNADNQIC 231 Query: 212 HMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA---YSCLDCSKL 268 +++++ +S + + I RI+ ++ RP +S L K Sbjct: 232 NISSNQ-QISVNELLDTICNLMKIED------KRIYKEE------RPGDVIHSYLSNDKA 278 Query: 269 ANTHNIRI 276 N + Sbjct: 279 KKYLNWQP 286 >gi|91201500|emb|CAJ74560.1| strongly similar to dTDP-D-glucose 4,6-dehydratase [Candidatus Kuenenia stuttgartiensis] Length = 340 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 106/322 (32%), Gaps = 49/322 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRVG--------------RPD-----------ID 35 M L+ G G I V+ ++ + R D D Sbjct: 1 MAILITGGAGFIGSHFVRRMVKHNHVVVLDKLTYAGNLENLRDIREDREFSGYFKFYKGD 60 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI-GIP 94 + + + DVI+N AA T VD++ + +G + +A+ Sbjct: 61 ICNQELVDHIMSTEKIDVIVNFAAETHVDRSILSAGTFIDTDIKGVFVLLEASRRYTIKK 120 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWV 150 I ISTD V+ E NP N Y SK G+ +Y N Y +I R + Sbjct: 121 FIQISTDEVYGTAFHDAFKETDSLNPSNPYAASKAGGDRLAFAYWNTYKLPIIITRASNN 180 Query: 151 YSIFGSN--FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTS 206 Y + F+ + A E ++ + D Q AI I E Sbjct: 181 YGSYQHPEKFIPLFITNAIEGLKLPLYGDGRQERDWIHVEDHCAAIDFIIEKGKEGE--- 237 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 ++++ + D A +I A+ G V R Y LDC+ Sbjct: 238 ---VYNIGGGNEKQNI-DTALFILSVLAKDKGMIESVKDREGHD-----RR--Y-ALDCT 285 Query: 267 KLANTHNIRISTWKEGVRNILV 288 KL + ++EG+R+ + Sbjct: 286 KLKSLGWKPQIDFEEGLRDTIK 307 >gi|304314773|ref|YP_003849920.1| UDP-glucose 4-epimerase [Methanothermobacter marburgensis str. Marburg] gi|302588232|gb|ADL58607.1| UDP-glucose 4-epimerase [Methanothermobacter marburgensis str. Marburg] Length = 323 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 89/252 (35%), Gaps = 36/252 (14%) Query: 3 CLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDI--------DLLKPKDFASFFL 47 L++G G I ++ + E + + R + DL + Sbjct: 2 ILIVGGAGYIGSHVNKFLSERGYETLILDNLTKGHREHVKWGELIEGDLGDRRLLNRILT 61 Query: 48 SFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVFDG 106 + + +++ AA+T V ++ +P + N + + G+ ++ ST V+ Sbjct: 62 EYDVEAVMHFAAFTDVGESVQKPGDYYRNNVVNTMNLLDSMLKNGVGRFVFSSTCAVYGN 121 Query: 107 LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-------------SI 153 S PI E P NP++ YG+SKL EE + Y++ Y + + Y + Sbjct: 122 PSEIPITEEHPLNPISPYGRSKLMVEEILRDYSDAYDLSYVSLRYFNAAGADPEVEIGEL 181 Query: 154 FGSNFLLSMLRLAKE---RREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENSDTS 206 L + L R + + + TP T + +E + Sbjct: 182 HEPETHLIPIVLDAAMGLRDSVRIFGTDYPTPDGTCIRDYIHVMDLADAHWRALEYLEGE 241 Query: 207 LRGIFHMTADGG 218 G+F++ G Sbjct: 242 RSGVFNLGNGNG 253 >gi|257086425|ref|ZP_05580786.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] gi|256994455|gb|EEU81757.1| UDP-glucose 4-epimerase [Enterococcus faecalis D6] Length = 329 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 111/316 (35%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ S Sbjct: 1 MSILVLGGAGYIGSHAVDQLISKGYAVVVVDNLLTGHRSAVHEQATFYEGDIRDKAFLCS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F S + +++ AA + V ++ ++P + F+ N G + G+ ++ ST Sbjct: 61 VFEKESIEGVLHFAANSLVGESVEQPLMYFNNNVHGTQIALEVMQEFGVKHIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGSNFL 159 + PI E +PTNP N YG+SKL E+ + +Y YV LR V + Sbjct: 121 YGEPKAMPITEETPTNPKNPYGESKLMMEKIMKWCDNAYGMKYVALRYFNVAGAKKDASI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 +R E+S+ D + TP T IA +++ Sbjct: 181 GEDHTPETHIVPIILQVALGQRAELSIFGDDYDTPDGTCIRDYVYIEDLIAAHILALEYL 240 Query: 206 SLRG---IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 G +F++ ++ G + + + E G I P +A P S Sbjct: 241 KNGGESDVFNLGSNNGYS-----VKEMLDAAREVTG-----QEIPATIAPRRAGDP--ST 288 Query: 263 L--DCSKLANTHNIRI 276 L K + Sbjct: 289 LIASSEKAKRVLGWQP 304 >gi|52001491|gb|AAU21546.1| GalE [Streptococcus thermophilus] Length = 333 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 39/228 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVG----------RPDI-----DLLKPKDFA 43 M LV+G G I + V+ + ++ V PD DL Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 44 SFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 F +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I + ST Sbjct: 61 KVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSST 119 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------- 151 + PI E +P NP+N YG+SKL E + Y I Y Sbjct: 120 AATYGIPEEIPILETTPQNPINPYGESKLMMETIMRWSDQAYGIKYVPLRYFNVAGAKPD 179 Query: 152 ------SIFGSNFLLSMLRLAKE-RREISVVCDQFGTP--TSALQIAR 190 ++ L +L++A+ R +I + D + TP T+ Sbjct: 180 GSIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVH 227 >gi|225180900|ref|ZP_03734348.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] gi|225168381|gb|EEG77184.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT 1] Length = 306 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 37/256 (14%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG---------------RPDIDLLKPKDFASF 45 K LV G G I + + +Q E++ V ++D+L P Sbjct: 3 KVLVTGGAGFIGSHIVDLLIQKGYEVVVVDNLVTGSKSNVNAHAVFYEVDILHP-QIDEV 61 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYVF 104 +P+VI++ AA V ++ +P ++N G + ++A + IY ST V+ Sbjct: 62 IKKEAPEVILHQAALVFVQQSIKDPLADGTVNTIGTLNLLRSAHLNNVGRFIYASTCAVY 121 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGSN--- 157 E P +P++ YG SK GE V + + +Y ILR A VY Sbjct: 122 GDAQGRVATEDDPVSPISFYGASKYMGEMYVRLFYDLYKLDYTILRYANVYGPRQQPHGE 181 Query: 158 --FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHM 213 + ++ K+ ++ Q +A A + + + G+ Sbjct: 182 GGVIPIFMQNMKKEISPTIFGTGLQSRDFIYVQDVATANLLAIAKGKQQTLNIGTGV--- 238 Query: 214 TADGGPVSWADFAEYI 229 S D ++I Sbjct: 239 -----ATSIYDLHQHI 249 >gi|110668875|ref|YP_658686.1| nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] gi|109626622|emb|CAJ53088.1| nucleoside-diphosphate-sugar epimerase (probable UDP-glucose 4-epimerase) [Haloquadratum walsbyi DSM 16790] Length = 329 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 55/327 (16%), Positives = 106/327 (32%), Gaps = 54/327 (16%) Query: 3 CLVIGNNGQIAQSLSSMCVQDV--------------EIIRVGRPDI---DLLKPKDFASF 45 V G G I + + ++ +G D+ D+ Sbjct: 11 VAVTGAAGYIGSRVVRLLQNAHPEWALTAIDNFYLGDVRGIGETDVVHVDVRNRSALEDA 70 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVFD 105 D++++ AA + VD E ++A+ +N G +A G + + V Sbjct: 71 LTGS--DIVLHLAAVSGVDDCETNADLAYEVNVTGTTNVAWFCRKTGAALAFPFSMAVLG 128 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-------- 157 PI +P+N YG++KL GE V + + +++G + Sbjct: 129 DPESFPISVDDGRDPMNWYGRTKLIGERLVEEFAADTFPAHLFLKSNLYGEHTIDGQRVS 188 Query: 158 ---FLLSMLRLAKERREISVVC--DQFGTPTSALQIARAIIQIAHNLIENSDTSLRGI-- 210 + + + + ++V Q +ARA ++ A L E + GI Sbjct: 189 KGTVINFFVNRVFDEKPLTVYEPGTQSRNYIHVDDVARAYVRSAERLQEQLNRDETGIEK 248 Query: 211 FHMTA--DGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCL----- 263 + + + D G ++ AE + + E V + + P L Sbjct: 249 YEIASKEDPGIMT---VAETVRQSAQEEIDTDVDVTLV---ENPRGGE-----TLVDRFE 297 Query: 264 -DCSKLANTHNIRIST-WKEGVRNILV 288 D SK N + +R +L Sbjct: 298 VDISKAREQLNWEPQHTVESSIRRLLQ 324 >gi|75911804|gb|ABA29494.1| UDP-GlcNAc/Glc 4-epimerase [Campylobacter jejuni subsp. jejuni 81-176] gi|75911827|gb|ABA29512.1| UDP-GlcNAc/Glc 4-epimerase [Campylobacter jejuni] gi|75911837|gb|ABA29520.1| UDP-GlcNAc/Glc 4-epimerase [Campylobacter jejuni] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 105/330 (31%), Gaps = 72/330 (21%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI-----------DLLKP 39 MK L+ G G I L D EI + D+ DL Sbjct: 3 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 62 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + + F D I++ AA V ++ P + N + + G I+ Sbjct: 63 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYINNTVNTTNLIETCMQTGVNKFIFS 122 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSI 153 ST + + E SP P+N YG+SKL EE + + + ILR V Sbjct: 123 STAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGA 182 Query: 154 FGSNFLLSML------------RLAKERREISVVCDQFGT--------PTSALQIARAII 193 L A +R ++ + D + T I+ A + Sbjct: 183 CMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHL 242 Query: 194 QIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 L EN S+ G H + + + + G KV P Sbjct: 243 AALDYLKENESNVFNVGYGHGFSV----------KEVIEAMKKVSGVDFKVELA-----P 287 Query: 253 TKAHRPAYSCL--DCSKLANTHNIRISTWK 280 +A P S L D SK+ N +++W+ Sbjct: 288 RRAGDP--SVLISDASKIRN-----LTSWQ 310 >gi|121613372|ref|YP_001000808.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 81-176] gi|167005721|ref|ZP_02271479.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 81-176] gi|87249214|gb|EAQ72175.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 81-176] Length = 328 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 105/330 (31%), Gaps = 72/330 (21%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI-----------DLLKP 39 MK L+ G G I L D EI + D+ DL Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + + F D I++ AA V ++ P + N + + G I+ Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYINNTVNTTNLIETCMQTGVNKFIFS 120 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSI 153 ST + + E SP P+N YG+SKL EE + + + ILR V Sbjct: 121 STAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGA 180 Query: 154 FGSNFLLSML------------RLAKERREISVVCDQFGT--------PTSALQIARAII 193 L A +R ++ + D + T I+ A + Sbjct: 181 CMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHL 240 Query: 194 QIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 L EN S+ G H + + + + G KV P Sbjct: 241 AALDYLKENESNVFNVGYGHGFSV----------KEVIEAMKKVSGVDFKVELA-----P 285 Query: 253 TKAHRPAYSCL--DCSKLANTHNIRISTWK 280 +A P S L D SK+ N +++W+ Sbjct: 286 RRAGDP--SVLISDASKIRN-----LTSWQ 308 >gi|310827640|ref|YP_003959997.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] gi|308739374|gb|ADO37034.1| UDP-glucose 4-epimerase [Eubacterium limosum KIST612] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 119/317 (37%), Gaps = 62/317 (19%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 MK LV G G I + + + ++ + R + D+ Sbjct: 1 MKVLVCGGAGYIGSHVVRALLDKGYGVVVLDNLSTGHRQSVPEGAALEVGDIRDAACLER 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 FL D +++ A + V ++ ++P + N G + ++ + I I+ ST Sbjct: 61 LFLRHEVDCVMHFCANSLVGESMEKPIEYYDNNVYGTLCLLRSMVNNDIKHFIFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVA----SYTNNYVILRTAWVYSIFGS--- 156 + R PIDE +P +P N YG++KLA E+ + +Y +Y + R S Sbjct: 121 YGEPERLPIDEDTPKHPTNTYGETKLAVEKMLHWMEVAYGLHYKVFRYFNASGAHPSGEI 180 Query: 157 --------NFLLSMLRLAKE-RREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + +L+ A+ R +I V D + TP + IA A I +L Sbjct: 181 GEDHAPETHLIPLILKTAQGIRDKIYVFGDDYDTPDGSCIRDYIHVMDIAEAHILGMEDL 240 Query: 200 IENSDTSLRGIFHMTADGG-----------PVSWADFAEYIFWESAERGGPYSKVYRIFT 248 +++ + ++++ G V+ DF I + R G + I + Sbjct: 241 VKSETSD---VYNLGNGNGFSVLEVIEKVKAVTGKDFEVEI---TDRRAGDPGVL--IAS 292 Query: 249 KQYPTKA--HRPAYSCL 263 + KA P S L Sbjct: 293 SEKAQKALGWSPVNSSL 309 >gi|308187471|ref|YP_003931602.1| dTDP-glucose 4,6 dehydratase [Pantoea vagans C9-1] gi|308057981|gb|ADO10153.1| dTDP-glucose 4,6 dehydratase [Pantoea vagans C9-1] Length = 359 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 89/258 (34%), Gaps = 49/258 (18%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLL 37 MK L+ G G I ++ + + E+I V + ID+ Sbjct: 1 MKILITGGAGFIGSAVVRHVINNTNDEVINVDKLTYAGNLESLKEVSSNPRYTFRQIDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 + A F PD I++ AA + VD++ P N G A+ +AA Sbjct: 61 DGQAIAEALSEFQPDAIMHLAAESHVDRSITGPAEFVQTNVVGTYAMLEAARQYWSALPE 120 Query: 93 -----IPCIYISTDYVFDG-------LSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYT 139 +ISTD V+ P E +P P + Y +K A + V ++ Sbjct: 121 ERKAAFRFHHISTDEVYGDLPHPDEMDGDLPLFTEETPYAPSSPYSSTKAASDHLVRAWG 180 Query: 140 NNY----VILRTAWVYSIFG--SNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARA 191 Y ++ + Y + + ++ A E + + + DQ ARA Sbjct: 181 RTYKLPVIVTNCSNNYGPYHFPEKLIPLIISNALEGKPLPIYGKGDQIRDWLYVEDHARA 240 Query: 192 IIQIAHNLIENSDTSLRG 209 + + N + ++ G Sbjct: 241 LYTVVKNAETGTTYNIGG 258 >gi|293380796|ref|ZP_06626839.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|312978291|ref|ZP_07790034.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] gi|290922639|gb|EFD99598.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 214-1] gi|310894810|gb|EFQ43881.1| UDP-glucose 4-epimerase [Lactobacillus crispatus CTV-05] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 117/329 (35%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LV+G G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P +P+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLDPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGAASDGTI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A + ++ D + T T+ + I L Sbjct: 181 GEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 +T+ +F++ G + I + + G Y R P Sbjct: 241 METNKSDVFNLGTAQGYSN-----LEILNAAKKVTGIDIP--------YTMGPRRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 288 SLVADSTKARTILGWKPKH--ESVDDVIA 314 >gi|126657358|ref|ZP_01728517.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] gi|126621345|gb|EAZ92057.1| UDP-glucose 4-epimerase [Cyanothece sp. CCY0110] Length = 333 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 40/257 (15%) Query: 2 KCLVIGNNGQIA-QSLSSMCVQDVEIIRVG-----RPDI------------DLLKPKDFA 43 K LV G G I ++ ++ ++I + D+ DL Sbjct: 7 KILVTGGAGYIGSHAVLALKKAGYDVIILDNLIYGHQDLVEKILKVELIIGDLGDRSLLK 66 Query: 44 SFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 F +S D +++ AA+ V ++ EP+ + N + +A + ++ ST Sbjct: 67 DIFKQYSIDAVMHFAAFAYVGESIKEPQKYYRNNVANTLTLLEAMKATSINKLVFSSTCA 126 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNF 158 + +PI E P NP+N YG SKL E+ + +Y NYV R Sbjct: 127 TYGVAQFSPITEQHPQNPINPYGASKLMVEQILKDFSKAYDLNYVCFRYFNAAGAHPEGL 186 Query: 159 LLSM------------LRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSD 204 L L +R+ IS+ + TP T + +L+ + Sbjct: 187 LGEDHDPEPHLIPLVLLTALGKRKFISIFGRDYPTPDGTCIRDYIHVLDIAQAHLLGLNY 246 Query: 205 TSLRG---IFHMTADGG 218 G IF++ G Sbjct: 247 LQQGGKSDIFNLGNGNG 263 >gi|86150760|ref|ZP_01068976.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] gi|315124607|ref|YP_004066611.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841930|gb|EAQ59176.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni 260.94] gi|315018329|gb|ADT66422.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 328 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 105/330 (31%), Gaps = 72/330 (21%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI-----------DLLKP 39 MK L+ G G I L D EI + D+ DL Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKTRAFKFFEQDLSDF 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + + F D I++ AA V ++ P + N + + G I+ Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIEICLQTGVNKFIFS 120 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSI 153 ST + + E SP P+N YG+SKL EE + + + ILR V Sbjct: 121 STAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGA 180 Query: 154 FGSNFLLSML------------RLAKERREISVVCDQFGT--------PTSALQIARAII 193 L A +R ++ + D + T I+ A + Sbjct: 181 CMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHL 240 Query: 194 QIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 L EN S+ G H + + + + G KV P Sbjct: 241 AALDYLQENESNVFNVGYGHGFSV----------KEVIEAMKKVSGVDFKVELA-----P 285 Query: 253 TKAHRPAYSCL--DCSKLANTHNIRISTWK 280 +A P S L D SK+ N +++W+ Sbjct: 286 RRAGDP--SVLISDASKIRN-----LTSWQ 308 >gi|302876882|ref|YP_003845515.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|307687567|ref|ZP_07630013.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] gi|302579739|gb|ADL53751.1| UDP-glucose 4-epimerase [Clostridium cellulovorans 743B] Length = 329 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 107/318 (33%), Gaps = 56/318 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE-IIRVG------RPDI---------DLLKPKDFAS 44 M LV G G I ++ E ++ V R + D++ Sbjct: 1 MSVLVCGGAGYIGSHCVYELIERGEDVVVVDNLQTGHRAAVHEKAKFYEGDVIDFDFMNK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F S D +I+ AA + V ++ ++P ++ N GA + +A + ++ ST V Sbjct: 61 VFKENSIDAVIHFAANSLVGESMEKPLKYYNNNVYGAQKLLEAMIANDVKKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + P+ E TNP N YG++KLA E+ + + I A Y Sbjct: 121 YGEPKTVPVVESLDTNPTNTYGETKLAMEKMMKWCDQAHGIKFIALRYFNVAGAHENGLI 180 Query: 152 -SIFGSNFLLSMLRL---AKERREISVVCDQFGTPTSALQIARA---IIQIAHNLIENSD 204 L L L +R I + D + PT+ R I + I + Sbjct: 181 GEAHSPETHLIPLILQVPLGKRESIMIYGDDY--PTADGTCIRDYIYIRDLIEGHILALE 238 Query: 205 TSLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 G +F++ G F+ E+A R + I K P +A PA Sbjct: 239 RLRSGADSDVFNLGNGNG------FSVKEMIEAARRVTG----HPIPAKVSPRRAGDPA- 287 Query: 261 SCL--DCSKLANTHNIRI 276 L K Sbjct: 288 -VLVASSEKAKEILGWTP 304 >gi|308182028|ref|YP_003926156.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] gi|308047519|gb|ADO00063.1| UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 334 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/329 (18%), Positives = 111/329 (33%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ + Sbjct: 1 MAVLVLGGAGYIGSHAVDRLVAKGYDVAVVDNLVTGHRAAVNEHARFYEGDVRDTAFMNT 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + + +I+ AA++ V ++ +P F N G + + ++ ST Sbjct: 61 VFDQENVEGVIHFAAFSVVPESMKDPLKYFDNNTAGMVKLLEVMAKHDVKKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P N YG+SKLA E+ + Y I A Y Sbjct: 121 YGEPKQVPIKESDPQVPTNPYGESKLAMEKIMHWSDVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + + A ER ++ + D + TP T+ ++ +A I + Sbjct: 181 GEDHAPETHLVPIILQVAAGERDQLQIFGDDYPTPDGTNVRDYVH-VVDLADAHILALEY 239 Query: 206 SLRGI----FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +G F++ + G F+ ++A I P +A P S Sbjct: 240 LKQGHDSDAFNLGSSTG------FSNKQMLDAAREVTG----KPIPAVMAPRRAGDP--S 287 Query: 262 CL--DCSKLANTHNIRISTWKEGVRNILV 288 L K + V+ I+ Sbjct: 288 TLVAASDKARTVLGWTPQY--DDVKEIIK 314 >gi|256846664|ref|ZP_05552120.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_36A2] gi|256717884|gb|EEU31441.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_36A2] Length = 329 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG--------------RPDI-DLLKPKDFAS 44 M LV G G I + + ++ +++ V ++ DL + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVVDSLITGHVDAVDEKAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVNKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y + S + Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 +R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 D IF++ G + + + + G Y I + P +A PA Sbjct: 241 RDGGDSQIFNLGNGEGFS-----VKEVIEVTRKVTG-----YPIPAEVSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K + + Sbjct: 289 LIASSKKAIDVLKWKP 304 >gi|190410050|ref|YP_001965574.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti] gi|125631080|gb|ABN47081.1| putative UDP-glucose 4-epimerase protein [Sinorhizobium meliloti SM11] Length = 328 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 16/166 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG------RPDI--------DLLKPKDFASFF 46 + LV G G I + + ++ +E I R + D+L Sbjct: 5 RILVTGGAGYIGSHTAKLLRLEGIEPIVYDNLTTGNRSAVRWGPFVLGDILDGNHLVEVL 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 PD +I+ AA V ++ +P ++ N G ++ A G I+ S+ + Sbjct: 65 EYHRPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRRTGVDKVIFSSSCATYG 124 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E +P +P+N YGK+KL E +A Y + + A Y Sbjct: 125 VPAVLPIHETTPQDPINPYGKTKLMAEHMLADYAAAFKLNYVALRY 170 >gi|294056082|ref|YP_003549740.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] gi|293615415|gb|ADE55570.1| dTDP-glucose 4,6-dehydratase [Coraliomargarita akajimensis DSM 45221] Length = 354 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 44/247 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR---------------------PDIDLL 37 M+ +V G G I +L +Q ++ + IDL Sbjct: 1 MRIIVTGGAGFIGSALIRHLIQKSHHHVLNLDALTYASNTRSLAAVSQSDRYQFAQIDLG 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------A 87 A+ F + PD +I+ AA + VD++ D P+ + N G + + A Sbjct: 61 DRAALANCFQQYQPDTVIHLAAESHVDRSIDSPDQFIATNVSGTLNLLRVAQDYWSTLSA 120 Query: 88 ADSIGIPCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV- 143 A ++STD V+ L+ +P E SP P + Y SK A + + ++T Y Sbjct: 121 AAQDQFRINHVSTDEVYGDLNDSPEAAFSESSPYRPSSPYSASKAAADHLIHAWTRTYGL 180 Query: 144 ---ILRTAWVYSIF--GSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIA 196 I Y + + M+ A + +++ D + A A+ + Sbjct: 181 PSSIAVCCNNYGPYQFPEKLIPHMILRALNGQSLTIYGDGHQSREWLHVNDCAAALTAVL 240 Query: 197 HNLIENS 203 + N Sbjct: 241 ESGKANQ 247 >gi|256843537|ref|ZP_05549025.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] gi|256614957|gb|EEU20158.1| UDP-glucose 4-epimerase [Lactobacillus crispatus 125-2-CHN] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 117/329 (35%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LV+G G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVVGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ +A + G+ ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDAGVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P +P+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLDPINPYGETKMMMEKIMAWADKADGIKCTALRYFNVAGAASDGTI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A + ++ D + T T+ + I L Sbjct: 181 GEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 +T+ +F++ G + I + + G Y R P Sbjct: 241 METNKSDVFNLGTAQGYSN-----LEILNAAKKVTGIDIP--------YTMGPRRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 288 SLVADSTKARTILGWKPKH--ESVDDVIA 314 >gi|83589532|ref|YP_429541.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] gi|83572446|gb|ABC18998.1| UDP-galactose 4-epimerase [Moorella thermoacetica ATCC 39073] Length = 337 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 85/247 (34%), Gaps = 40/247 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRP------DI---DLLKPKDFASFF 46 K LV G G I + + + + G P D+ DLL + Sbjct: 3 KVLVTGGAGYIGSHVVKALGERGYRVLTYDSLVTGHPWAVLYGDLVVGDLLDAAKLEAVI 62 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 F PD +++ AA+ V ++ +P + N +G + G I+ S+ V+ Sbjct: 63 RDFRPDAVMHFAAHIVVPESVAQPLKYYINNVQGTLNLLACMQKSGVNKLIFSSSAAVYG 122 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL-- 159 R P+ E +P +P+N YG SK E + + I + Y + Sbjct: 123 IPERIPVPEEAPLHPINPYGHSKAMVERILQDLSAAGGITYVSLRYFNVAGADRDGRIGE 182 Query: 160 ----------LSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNLIE 201 L+ A +R +SV + TP +A A + L++ Sbjct: 183 GKEDATHLITLATRTAAGKRPYLSVFGTDYPTPDGTCIRDYIHVEDLAAAHVLALEYLLD 242 Query: 202 NSDTSLR 208 + + Sbjct: 243 GGKSEVF 249 >gi|150375822|ref|YP_001312418.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] gi|150030369|gb|ABR62485.1| UDP-glucose 4-epimerase [Sinorhizobium medicae WSM419] Length = 328 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 16/166 (9%) Query: 2 KCLVIGNNGQIAQSLSSMC-VQDVEIIRVG------RPDI--------DLLKPKDFASFF 46 + LV G G I + + ++ +E I R + D+L Sbjct: 5 RILVTGGAGYIGSHTAKLLRLEGIEPIVYDNLTTGNRSAVRWGPFVLGDILDGNHLVEVL 64 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFD 105 PD +I+ AA V ++ +P ++ N G ++ A G I+ S+ + Sbjct: 65 EYHRPDAVIHFAASAYVGESVADPAKYYNNNVRGTLSLLDACRRTGVDKVIFSSSCATYG 124 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + PI E +P +P+N YGK+KL E +A Y + + A Y Sbjct: 125 VPAVLPIHETTPQDPINPYGKTKLMAEHMLADYAAAFKLNYVALRY 170 >gi|86153044|ref|ZP_01071249.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni HB93-13] gi|41058385|gb|AAR99162.1| putative UDP-glucose-4-epimerase [Campylobacter jejuni] gi|85843929|gb|EAQ61139.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 328 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 105/330 (31%), Gaps = 72/330 (21%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI-----------DLLKP 39 MK L+ G G I L D EI + D+ DL Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 60 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + + F D I++ AA V ++ P + N + + G I+ Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYINNTVNTTNLIETCMQTGVNKFIFS 120 Query: 99 STDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN-----NYVILRTAWVYSI 153 ST + + E SP P+N YG+SKL EE + + + ILR V Sbjct: 121 STAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGA 180 Query: 154 FGSNFLLSML------------RLAKERREISVVCDQFGT--------PTSALQIARAII 193 L A +R ++ + D + T I+ A + Sbjct: 181 CMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHL 240 Query: 194 QIAHNLIEN-SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP 252 L EN S+ G H + + + + G KV P Sbjct: 241 AALDYLQENESNVFNVGYGHGFSV----------KEVIEAMKKVSGVDFKVELA-----P 285 Query: 253 TKAHRPAYSCL--DCSKLANTHNIRISTWK 280 +A P S L D SK+ N +++W+ Sbjct: 286 RRAGDP--SVLISDASKIRN-----LTSWQ 308 >gi|326693444|ref|ZP_08230449.1| UDP-glucose 4-epimerase [Leuconostoc argentinum KCTC 3773] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 111/333 (33%), Gaps = 64/333 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD------VEIIRVGRPD----------IDLLKPKDFAS 44 M LV+G G I + V+ V+ + G D +D+ ++ Sbjct: 1 MSVLVLGGAGYIGSHMVKTLVEAGRDVVVVDALFTGHRDAVHPDAKFYQVDIRDKAALSA 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + +++ AA++ V ++ P F N G + + + ++ ST Sbjct: 61 VFDQEDIEQVVHFAAFSIVPESVANPLKYFDNNTSGMVTLLEVMKDHDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E P NP+N YG+SKL E+ +A + A Y Sbjct: 121 YGNPVNIPIKETDPQNPINPYGESKLMMEKIMAWSDQADGVKWVALRYFNVAGAAEDGTI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + +R I + D + TP L +A A ++ L Sbjct: 181 GEDHQPETHLVPIILQAGLGQRDYIEMFGDDYNTPDGFNVRDYVHVLDLADAHMRALQYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 + ++++ + G + F+ E+A I K P +A P Sbjct: 241 ADGNESNQF-------NLGSAT--GFSVKEMVEAAREATGVD----IPAKIGPRRAGDPD 287 Query: 259 ---AYSCLDCSKLANTHNIRISTWKEGVRNILV 288 A S K + + V++I+ Sbjct: 288 ILIANS----DKARDVLGWAPKY--DNVQDIIK 314 >gi|296876271|ref|ZP_06900324.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] gi|296432776|gb|EFH18570.1| UDP-glucose 4-epimerase [Streptococcus parasanguinis ATCC 15912] Length = 359 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 53/227 (23%), Positives = 86/227 (37%), Gaps = 37/227 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVG----------RPDI-----DLLKPKDFA 43 M LV+G G I + V + + ++ V PD DL Sbjct: 28 MAILVLGGAGYIGSHMVDRLVNEGQEKVVVVDSLVTGHRAAVHPDAVFYQGDLADQDFMR 87 Query: 44 SFFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YISTD 101 + F D +I+ AAY+ V ++ +P F N G + + G+ I + ST Sbjct: 88 TVFKEHADIDAVIHFAAYSLVAESMADPLKYFDNNTAGMVKLLEVMHECGVHYIVFSSTA 147 Query: 102 YVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY---------- 151 + PI E +P NP+N YG+SKL E + Y I Y Sbjct: 148 ATYGIPEEIPILETTPQNPINPYGESKLMMETIMRWADQAYGIKYVPLRYFNVAGAKPDG 207 Query: 152 -----SIFGSNFLLSMLRLAK-ERREISVVCDQFGTP--TSALQIAR 190 ++ L +L++A+ +R +IS+ D + TP T+ Sbjct: 208 SIGEDHGPETHLLPIVLQVAQGKREKISIFGDDYQTPDGTNVRDYVH 254 >gi|332637107|ref|ZP_08415970.1| UDP-galactose 4-epimerase [Weissella cibaria KACC 11862] Length = 330 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 113/329 (34%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------RP---------DIDLLKPKDFAS 44 M LV+G G I + + +++ V R ++D+ Sbjct: 1 MAILVLGGAGYIGSHMVDTLLSDGRDVVVVDNLLTGHRAAVPAGVPFYEVDIRDKAALRE 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + + +++ AA + V ++ +P F N G A+ + + ++ ST Sbjct: 61 VFEKENIEQVVHFAASSIVPESMADPLKYFDNNTAGMIALLEVMLEFDVKQIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------SI 153 + PI E +P NP+N YG+SKL E + + Y + A Y SI Sbjct: 121 YGIPEENPIKETTPQNPINPYGESKLQMEHIMKWADDAYGLKWVALRYFNVAGAKADGSI 180 Query: 154 FGSNFLLSML------RLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 + + + L +R +I + D + TP + +A A + L Sbjct: 181 GEDHPVETHLVPIILQTALGQREKIMMFGDDYNTPDGFNVRDYVHVMDLANAHVLALDYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + ++++ + G + F+ E+A I + P +A P Sbjct: 241 AKGNESNQF-------NLGSAN--GFSVKQMVEAAREATG----KEIPAEVGPRRAGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 +K + V+ I+ Sbjct: 288 SLVASSAKAREVLGWAPKY--DDVKEIIK 314 >gi|311069912|ref|YP_003974835.1| hypothetical protein BATR1942_14910 [Bacillus atrophaeus 1942] gi|310870429|gb|ADP33904.1| hypothetical protein BATR1942_14910 [Bacillus atrophaeus 1942] Length = 309 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 93/255 (36%), Gaps = 29/255 (11%) Query: 1 MK-CLVIGNNGQIAQSLSSMCV-QDVEIIRVGRPD---------IDLLKPKDFASFFLSF 49 MK +IG G I L+++ + I V + D+L + Sbjct: 1 MKHIAIIGGAGFIGSELAALLQDKGFHTIIVDQKKPNSDAPFRYADILDQQTLRESLQGA 60 Query: 50 SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYVFDGLS 108 D +++ AA VD E +N EG + + +G ++ S+ VF Sbjct: 61 --DAVVHLAAMVGVDSCRSNGEDVIRVNFEGTKNVTEVCKELGISTLLFSSSSEVFGDSP 118 Query: 109 RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSN-----FLLSML 163 P E S P + YGK+KL EE + + + +R ++++G+ + Sbjct: 119 DFPFTETSQKLPKSAYGKAKLKSEEYLREQASEQLHIRVVRYFNVYGAKQREDFVMNKFF 178 Query: 164 RLAKERREISVVCD--QFGTPTSALQIARAI-IQIAHNLIENSDTSLRGIFHMTADGGPV 220 L + R++ + D Q + I + + H E D ++ + P+ Sbjct: 179 SLTESGRDLPLYGDGGQIRCFSYISDIVNGTYLALVHQGNEFEDFNI-------GNDQPI 231 Query: 221 SWADFAEYIFWESAE 235 + + AE I S Sbjct: 232 TIKELAEKINEISGR 246 >gi|253581957|ref|ZP_04859181.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] gi|251836306|gb|EES64843.1| UDP-glucose 4-epimerase [Fusobacterium varium ATCC 27725] Length = 329 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 103/316 (32%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEII------RVGRPDI----------DLLKPKDFAS 44 M LV G G I ++ + E + + G D DL + Sbjct: 1 MTILVCGGAGYIGSHVTRALIDSGEDVIVLDNLQTGHVDAVHEKAKLVLGDLRDNEFMEK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F D +I+ AA++ V ++ +EP F N G + K ++ ST Sbjct: 61 VFKDNKIDGVIDFAAFSLVGESVEEPLKYFENNFYGTLCLLKTMKKYNVHKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFG---- 155 + PI E T P N YG+SKLA E+ + Y I TA Y Sbjct: 121 YGEPENIPILENDKTFPTNPYGESKLAVEKMLKWCDKAYGIKYTALRYFNVAGAHPTGEI 180 Query: 156 -------SNFLLSMLRLA-KERREISVVCDQFGTPTSALQIARAIIQI-------AHNLI 200 S+ + +L++A +R I + D + PT R I + L Sbjct: 181 GEDHSPESHLIPIILQVALGKREHIGIYGDDY--PTVDGTCIRDYIHVMDLADAHILALK 238 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 ++ IF++ G + + + + + I P +A PA Sbjct: 239 RLNNGEESEIFNLGNGEGFS-----VKEVIEVARKVTK-----HPIPALVSPRRAGDPAK 288 Query: 261 SCLDCSKLANTHNIRI 276 K + Sbjct: 289 LVASSEKAMKELKWKP 304 >gi|300770498|ref|ZP_07080377.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] gi|300762974|gb|EFK59791.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium spiritivorum ATCC 33861] Length = 349 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 62/326 (19%), Positives = 117/326 (35%), Gaps = 57/326 (17%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVG----------------RPD-----IDLLK 38 ++ G G I + V D I+ + R + D+ Sbjct: 5 IIITGGAGFIGSHVVREFVIKYPDYHIVNLDALTYAGNLENLKDVQDRSNYKFVKADITD 64 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSI------G 92 F ++ PD +I+ AA + VD++ +P N G + AA I G Sbjct: 65 ANHIIEIFKNYQPDGVIHLAAESHVDRSISDPTAFVMTNVIGTVNLLNAAKEIWRDNYEG 124 Query: 93 IPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRT 147 ++STD VF L T E + +P + Y SK + + V +Y + Y V+ Sbjct: 125 KRFHHVSTDEVFGALGSTGLFTEDTKYDPHSPYSASKASSDHFVRAYHDTYGLPIVLTNC 184 Query: 148 AWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTPTS--ALQIARAIIQIAHNLIENS 203 + Y F + + + + + D T + A+AI + ++ ++ Sbjct: 185 SNNYGPNHFPEKLIPLCIHNILNNKPLPIYGDGKYTRDWLFVIDHAKAI-DLVYHQGKSG 243 Query: 204 DTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAH-RP---- 258 ++ G F+ + D + + + E+ G + Q T RP Sbjct: 244 ESYNVGGFNEWQNI------DLVKELCKQMDEKLGKPAG----TADQLITYVKDRPGHDL 293 Query: 259 AYSCLDCSKLANTHNIRIS-TWKEGV 283 Y+ D +K+ + S T++EG+ Sbjct: 294 RYAI-DATKINQELGYQPSVTFEEGL 318 >gi|56459650|ref|YP_154931.1| dTDP-D-glucose 4,6-dehydratase [Idiomarina loihiensis L2TR] gi|56178660|gb|AAV81382.1| DTDP-D-glucose 4,6-dehydratase [Idiomarina loihiensis L2TR] Length = 352 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 85/239 (35%), Gaps = 43/239 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLL 37 MK LV G G I ++ +++ +I + + +D+ Sbjct: 1 MKILVTGGAGFIGSAVIRHLIKNTSHIVINIDKLTYAGNVESLLPVSDSENYVFEQVDIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 + ++ PD +++ AA + VD++ + P N G + +A S Sbjct: 61 NAPEVKRVYIEHKPDAVMHLAAESHVDRSIEGPSEFIQTNIVGTYTLLEATRSYWSNLSE 120 Query: 93 -----IPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--- 142 +ISTD V+ G E + P + Y SK + + V ++ Y Sbjct: 121 EMKSTFRFHHISTDEVYGDLGDPTELFTETTAYAPSSPYSASKASSDHLVRAWHRTYGLP 180 Query: 143 -VILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIA 196 +I + Y + + ++ A +E+ V D Q ARA++++ Sbjct: 181 VIITNCSNNYGPYHFPEKLIPHIILNALSGKELPVYGDGKQIRDWLYVEDHARALVKVV 239 >gi|28379797|ref|NP_786689.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] gi|28272638|emb|CAD65567.1| UDP-glucose 4-epimerase [Lactobacillus plantarum WCFS1] Length = 334 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 111/329 (33%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDI---------DLLKPKDFAS 44 M LV+G G I ++ + + ++ V R + D+ + Sbjct: 1 MAVLVLGGAGYIGSHAVDRLVAKGYDVAVVDNLVTGHRAAVNEHARFYEGDVRDTAFMNT 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + + +I+ AA++ V ++ +P F N G + K ++ ST Sbjct: 61 VFDQENVEGVIHFAAFSVVPESMKDPLKYFDNNTAGMVKLLKVMAKHDVKKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E P P N YG+SKLA E+ + Y I A Y Sbjct: 121 YGEPKQVPIKESDPQVPTNPYGESKLAMEKIMHWSDVAYGIKFVALRYFNVAGAKPDGSI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 + + + A ER ++ + D + TP T+ ++ +A I + Sbjct: 181 GEDHAPETHLVPIILQVAAGERDQLQIFGDDYPTPDGTNVRDYVH-VVDLADAHILALEY 239 Query: 206 SLRGI----FHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYS 261 +G F++ + G F+ ++A I P +A P S Sbjct: 240 LKQGHDSDAFNLGSSTG------FSNKQMLDAAREVTG----KPIPAVMAPRRAGDP--S 287 Query: 262 CL--DCSKLANTHNIRISTWKEGVRNILV 288 L K + V+ I+ Sbjct: 288 TLVAASDKARTVLGWTPQY--DDVKEIIK 314 >gi|323341570|ref|ZP_08081806.1| UDP-glucose 4-epimerase [Lactobacillus ruminis ATCC 25644] gi|323091006|gb|EFZ33642.1| UDP-glucose 4-epimerase [Lactobacillus ruminis ATCC 25644] Length = 331 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 112/317 (35%), Gaps = 53/317 (16%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I + + Q +++ V RP+ DL Sbjct: 1 MAVLVLGGAGYIGSHTVDRLVEQGQDVVVVDSLVTGHKAAVRPEAKFYQGDLADKPFMRK 60 Query: 45 FFLSF-SPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 F D +I+ AA++ V ++ +P F N G + + ++ ST Sbjct: 61 VFSENPEIDAVIHFAAFSLVAESMKDPLKYFDNNTAGMVKLLEVMHEFNVNYIVFSSTAA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----------S 152 + + PI E P NP+N YG+SKL E+ + Y + A Y S Sbjct: 121 TYGIPEKMPIKEDDPQNPINPYGESKLMMEKIMRWADQAYGVKFVALRYFNVAGAKPDGS 180 Query: 153 IFGSNFLLSM-----LRLAK-ERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSD 204 I + + L++A+ +R ++ + + + TP T+ +A I D Sbjct: 181 IGEDHHPETHLLPIVLQVAQGKREKLQIFGNDYNTPDGTNVRDYVH-PFDLADAHILAVD 239 Query: 205 TSLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY 260 +G F++ + G + I + + G I + P + P Sbjct: 240 YLRKGNESNAFNLGSSTGFSN-----LEIVEAARDVTG-----KPIPAEMAPRRGGDP-D 288 Query: 261 SCLDCS-KLANTHNIRI 276 S + CS K + Sbjct: 289 SLIACSDKAREVLGWKP 305 >gi|301643908|ref|ZP_07243937.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] gi|301077728|gb|EFK92534.1| dTDP-glucose 4,6-dehydratase [Escherichia coli MS 146-1] Length = 354 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 87/252 (34%), Gaps = 43/252 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVG---------------------RPDIDLL 37 MK LV G G I ++ +++ E+ V D+ Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVVDCLTYAGNLESLEPVAGSERYSFSQTDIT 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 A+ F F PD++++ AA + VD++ D P N G + +AA Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSELGE 120 Query: 93 -----IPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--- 142 +ISTD V+ L T E +P P + Y SK + V ++ Y Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 143 -VILRTAWVYSIFGSNFLLSMLR----LAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 V+ + Y + L L LA + + +Q ARA+ ++A Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 198 NLIENSDTSLRG 209 ++ G Sbjct: 241 EGKSGETYNIGG 252 >gi|153806446|ref|ZP_01959114.1| hypothetical protein BACCAC_00710 [Bacteroides caccae ATCC 43185] gi|149131123|gb|EDM22329.1| hypothetical protein BACCAC_00710 [Bacteroides caccae ATCC 43185] Length = 351 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 55/341 (16%), Positives = 108/341 (31%), Gaps = 68/341 (19%) Query: 3 CLVIGNNGQIAQSLSSMCVQDVEIIRV-------GRPDIDL------------------- 36 LV G G I +L+ + D + I+V D+++ Sbjct: 13 ILVTGAAGFIGSNLAKRLINDYKDIKVIGLDTMTDYYDVNIKKERLRGIEALGGNWSFVE 72 Query: 37 ---LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 + F V++N AA V + P+ N G I +A Sbjct: 73 ESIANKEVIDKIFTKNRISVVVNLAAQAGVRYSITNPDAYIQSNLIGFYNILEACRHHEV 132 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAW-- 149 +Y S+ V+ + P NP+++Y +K + E +Y+ Y I T Sbjct: 133 DHLVYASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTGLRF 192 Query: 150 --VYSIFGSNFLLSMLR--LAKERREISVVCDQFGTP----TSALQIARAIIQIAHNLIE 201 VY G + +E + I + +G T I ++++ + E Sbjct: 193 FTVYGPAGRPDMAYFGFTNKLREGKTIQIFN--YGNCKRDFTYVDDIVEGVLRVMQHAPE 250 Query: 202 NSDTS------LRGIFHMTADGGPVSWADFAEYIFWESAERGGPY--------SKVYRIF 247 ++ ++++ + + DF + E G ++ + Sbjct: 251 KANGEDGLPIPPYKVYNIGNNSPE-NLLDFVTILQEELIRAGVLPFDYDFDAHKELVPMQ 309 Query: 248 TKQYP-TKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 P T A D + L + + + +EG+R Sbjct: 310 PGDVPVTFA--------DTTPLEDDFGYKPNTPLREGLRKF 342 >gi|288963204|ref|YP_003453483.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] gi|288915456|dbj|BAI76939.1| dTDP-glucose 4,6-dehydratase [Azospirillum sp. B510] Length = 355 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/337 (17%), Positives = 108/337 (32%), Gaps = 65/337 (19%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE--IIRVGR---------------------PDIDLLK 38 + LV G G I ++ + + + ++ V + +D+ Sbjct: 3 RILVTGGAGFIGSAVVRQLLAETDAFVVNVDKLTYAANLSSLPGAAGNPRYAFEQVDICD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---------- 88 + F + PD +++ AA + VD++ D P N G + +A Sbjct: 63 AAELRRVFDTHQPDAVMHLAAESHVDRSIDGPGEFIQTNVVGTFRLLEAVRGYWSALPVE 122 Query: 89 DSIGIPCIYISTDYVFDGLS-RTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 +ISTD VF L E + +P + Y SK + + V ++ Y V Sbjct: 123 RKERFRFHHISTDEVFGTLGDDGFFTETTAYSPNSPYSASKASSDHLVRAWHETYGLPVV 182 Query: 144 ILRTAWVYSIFGSNFLLSMLR----LAKERREISVVCDQFGTPTSALQIARAIIQIAHNL 199 + + Y + L L LA E+ + D ARA+ + Sbjct: 183 LTNCSNNYGPYHFPEKLIPLMILKGLAGEKLPVYGKGDNIRDWLYVEDHARALRLVLEKG 242 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYI---FWESAERGGPYSKVYRIFTKQYPTKAH 256 ++ G T + I + G P+ ++ T Sbjct: 243 RIGESYNIGGHNERTN-------LEVVRAICAHLDDMDPAGAPHDRLISFVTD------- 288 Query: 257 RP----AYSCLDCSKLANTHNI-RISTWKEGVRNILV 288 RP Y+ D K+ + T++ G+R + Sbjct: 289 RPGHDKRYAI-DAGKIERELGWTPLETFESGLRKTVA 324 >gi|260162545|dbj|BAI43787.1| dTDP-D-glucose 4,6-dehydratase [Klebsiella pneumoniae] Length = 354 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 87/252 (34%), Gaps = 43/252 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVG---------------------RPDIDLL 37 MK LV G G I ++ +++ E+ + D+ Sbjct: 1 MKILVTGGAGFIGSAVVRHIIENTRDEVRVLDCLTYAGNLESLAPVAGSERYSFSQTDIT 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 A+ F F PD++++ AA + VD++ D P N G + +AA Sbjct: 61 DAAAVAAQFSEFRPDIVMHLAAESHVDRSIDGPAAFIQTNVIGTFTLLEAARHYWSGLGE 120 Query: 93 -----IPCIYISTDYVFDGLSRTP--IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY--- 142 +ISTD V+ L T E +P P + Y SK + V ++ Y Sbjct: 121 AQKQAFRFHHISTDEVYGDLHGTDDLFTEETPYAPSSPYSASKAGSDHLVRAWNRTYGLP 180 Query: 143 -VILRTAWVYSIFGSNFLLSMLR----LAKERREISVVCDQFGTPTSALQIARAIIQIAH 197 V+ + Y + L L LA + + +Q ARA+ ++A Sbjct: 181 VVVTNCSNNYGPYHFPEKLIPLTILNALAGKPLPVYGNGEQIRDWLYVEDHARALYKVAT 240 Query: 198 NLIENSDTSLRG 209 ++ G Sbjct: 241 EGKSGETYNIGG 252 >gi|220924188|ref|YP_002499490.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] gi|219948795|gb|ACL59187.1| dTDP-4-dehydrorhamnose reductase [Methylobacterium nodulans ORS 2060] Length = 283 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 103/305 (33%), Gaps = 46/305 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQ--DVEIIRVGR--------------PDIDLLKPKDFAS 44 M+ LV+G G + ++ S+ E+ R ID+L A Sbjct: 1 MRILVLGARGMLGRACLSILAPSPGFEVHGSVRGAAPHDVPPGAGIIAGIDVLNTDHLAG 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCIYISTDYVF 104 P V+IN A +P A IN +A + G + +STD VF Sbjct: 61 AIRRVRPQVVINAVGVIKQLSAAHDPLEAVPINTLLPHRLADLCELAGARLVTVSTDCVF 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIFGSNFLLSMLR 164 DG E ++YG SK GE + + LRT+ + S L Sbjct: 121 DGKKGQ-YTEADRVTATDLYGLSKHLGEITGRQHV---LTLRTSIIGREHSSANGLLEWF 176 Query: 165 LAKERREISVVCDQF--GTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPVSW 222 L + +S G PT + +I + + L G++H+++D +S Sbjct: 177 L-RSGPVVSGYRHAVFSGFPTVV------LAEIIRDYV-LPRPDLHGLYHVSSDA--ISK 226 Query: 223 ADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA-YSCLDCSKLANTHNIRISTWKE 281 D + I R + + P L+ + + + WK+ Sbjct: 227 FDLLKLIAGVYEIR----KTIEPV---------AEPQIDRSLNSDRFRSETGFAPAAWKD 273 Query: 282 GVRNI 286 + ++ Sbjct: 274 MLVHM 278 >gi|281355249|ref|ZP_06241743.1| UDP-glucose 4-epimerase [Victivallis vadensis ATCC BAA-548] gi|281318129|gb|EFB02149.1| UDP-glucose 4-epimerase [Victivallis vadensis ATCC BAA-548] Length = 324 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 103/305 (33%), Gaps = 52/305 (17%) Query: 2 KCLVIGNNGQIAQSLSSMCVQ-DVEIIRVG------RPDID---------LLKPKDFASF 45 K LV G G I + S + ++ R +D L + S Sbjct: 3 KVLVTGGAGYIGSACSEYLLNLGYDVTIFDGLLTGHREAVDPRAKFILGNLSDREKIKSV 62 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 D I++ AA++ V ++ +P F N +A AA G+ ++ ST F Sbjct: 63 CREGKFDAIMHFAAFSLVGESMKDPSKYFRNNIANGINLADAAVESGVKMFVFSSTAATF 122 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------SIFGS 156 PI EF P+N YG+SKL E+ + Y Y I A Y + Sbjct: 123 GQPESIPIKEFDRQIPINPYGESKLCFEKILKWYHEIYGINYAALRYFNAAGATENFGED 182 Query: 157 NFLLSML------RLAKERREISVVCDQFGT--PTSALQIARAIIQIAHNLIENSDTSLR 208 + + L + +R ++ + D + T T I+ +A Sbjct: 183 HRPETHLIPLILQTVRGKRDKLMLYGDDYDTADGTCVRDYIH-ILDLAQAHELALSAPES 241 Query: 209 GIFHMTADGGPVSWA--DFAEYI------FWESAERGGPYSKVYRIFTKQYPTKAHR--- 257 G +++ G D AE + + + R G +K+ +A R Sbjct: 242 GHYNLGTGNGLSVREIIDAAEDVTGLKVNYEVAPRRPGDPAKLIACS-----ERARRMLK 296 Query: 258 --PAY 260 P Y Sbjct: 297 WEPKY 301 >gi|167648867|ref|YP_001686530.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] gi|167351297|gb|ABZ74032.1| dTDP-glucose 4,6-dehydratase [Caulobacter sp. K31] Length = 349 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 110/330 (33%), Gaps = 51/330 (15%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVGR-----PDIDLLKPKDFASF--------- 45 MK L+ G G I SL ++ + I+L + +D A + Sbjct: 1 MKILITGGAGFIGSSLVRSALGAGHAVVNLDALTYAGNAINLTEVEDAAGYVFEHVDIVD 60 Query: 46 -------FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG------ 92 F PD +++ AA + VD++ D P N G + +AA Sbjct: 61 AAAVDAVFARHRPDAVMHLAAESHVDRSIDGPLAFVRTNVMGTAVLLEAARRHWRGLDPE 120 Query: 93 ----IPCIYISTDYVFD--GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 I++STD V+ G P DE SP +P + Y SK A + ++ Y Sbjct: 121 RAVAFRFIHVSTDEVYGALGPDDPPFDEHSPIDPTSPYASSKAASDLLARAWQRTYALPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHN 198 ++ + Y F + +++ A + I + D Q A A+++I Sbjct: 181 IVTSCSNNYGPRQFPEKLIPTVIHNAVSGQPIPIYGDGRQVRDWLFVEDHAEALLRILEA 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP 258 + + + + + D I + T AH Sbjct: 241 GVPGE------TYLIGGEAEHGN-LDLTRAICAILDRLSPTNRPRAELITHVADRPAHDR 293 Query: 259 AYSCLDCSKLANTHNIRIST-WKEGVRNIL 287 Y+ D KL + R T + G+ + Sbjct: 294 RYAI-DAGKLRDALGWRPRTSLEAGLERTV 322 >gi|268316875|ref|YP_003290594.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] gi|262334409|gb|ACY48206.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252] Length = 310 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/316 (19%), Positives = 110/316 (34%), Gaps = 48/316 (15%) Query: 2 KCLVIGNNGQIAQSLS-SMCVQDVEI-----IRVGRPD----------IDLLKPKDFASF 45 K LV G G I ++ ++ + E+ GR + +D+ + A Sbjct: 3 KVLVTGGAGFIGSHVADALLERGYEVHILDDFSSGREENVPAGAVVHRMDVRD-EAVADL 61 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTD-YV 103 F ++I+ AA V ++ +P+ +N G + +A G I+ ST + Sbjct: 62 FARERFPILIHHAAQMDVRRSVADPKFDADVNIMGLLNLMEAGRQHGLQKVIFASTGGAI 121 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNF- 158 + P DE P PL+ YG +KLA E+ + Y YV LR A VY + Sbjct: 122 YGEPDYVPQDEDHPVRPLSPYGITKLASEKYLYFYEQQYGIPYVALRYANVYGPRQNPHG 181 Query: 159 ------LLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFH 212 + + L ++ I +Q + A + G+F+ Sbjct: 182 EAGVVAIFTQRMLEGKQPVIYGSGEQTRDFVYVGDVVEANLAALAY-------PGSGVFN 234 Query: 213 MTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCSKLANTH 272 + G S F + P +V + + P + R S L + Sbjct: 235 I-GTGIETSVNQL----FRTLRDLINP--EVPEVHGEAKPGEQQR---SVLGYERARREL 284 Query: 273 NIRIS-TWKEGVRNIL 287 + +EG+R + Sbjct: 285 GWEPRVSLQEGLRRTV 300 >gi|254853520|ref|ZP_05242868.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-503] gi|300765024|ref|ZP_07075012.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N1-017] gi|258606893|gb|EEW19501.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL R2-503] gi|300514324|gb|EFK41383.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL N1-017] Length = 327 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 108/316 (34%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M V+G G I ++ + + E++ R G + D+ +S Sbjct: 1 MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F D +I+ AA + V ++ + P + + N G + + + G+ ++ S+ Sbjct: 61 VFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PTNP + YG++KL E+ + +Y YV LR V + Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALRYFNVAGAKADGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 181 GEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIKALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ + G F+ E+A I + P +A P Sbjct: 241 KNGGESNIFNLGSSNG------FSVKEMLEAAR----TVTGKEIPAEVVPRRAGDPGTLI 290 Query: 263 LDCSKLANTHNIRIST 278 K + Sbjct: 291 ASSDKAREILGWEPTY 306 >gi|291542775|emb|CBL15885.1| UDP-galactose 4-epimerase [Ruminococcus bromii L2-63] Length = 330 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/319 (18%), Positives = 105/319 (32%), Gaps = 57/319 (17%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVGRPDI---------------DLLKPKDFAS 44 MK LV+G G I + + E++ + DL + + Sbjct: 1 MKILVLGGAGYIGSHTVYRLIESGNEVVVFDNLETGHIEAVHPKAKFYKGDLRNRSEIDN 60 Query: 45 FFLSFS-PDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDY 102 F D +I+ AA + V ++ P + N G + ++ + G ++ ST Sbjct: 61 VFDKEKGIDAVIHFAANSLVGESMTNPLKYYDNNLNGTKVLLQSMVAHGIDKIVFSSTAA 120 Query: 103 VFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGS-- 156 + RTPI E PTNP N YG++K + E + + + Y S Sbjct: 121 TYGEPERTPILETDPTNPTNCYGETKKSMERMFYWVEKAHGLRYVSLRYFNACGAHISGK 180 Query: 157 ---------NFLLSMLRLAK-ERREISVVCDQFGTPTSALQIARAIIQ---IAHNLIENS 203 + + +L+ A+ R IS+ + PTS R I +A I Sbjct: 181 IGEAHNPETHLIPIILQAAQGTRDHISIFGTDY--PTSDGTCIRDYIHVTDLAQAHILAV 238 Query: 204 DTSLRG----IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + ++G IF++ G + ++ E KV + A Sbjct: 239 EYLMKGGKSDIFNLGNGVGFS-----VREVIEKAKEVTQKDIKVVEESRRS-GDPA---- 288 Query: 260 YSCL--DCSKLANTHNIRI 276 L K + Sbjct: 289 --VLIASSDKAKTVLGWKP 305 >gi|262067188|ref|ZP_06026800.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] gi|291379091|gb|EFE86609.1| UDP-glucose 4-epimerase [Fusobacterium periodonticum ATCC 33693] Length = 329 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 68/316 (21%), Positives = 106/316 (33%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVEIIRV------GRPDI----------DLLKPKDFAS 44 M LV G G I + ++ E + V G D DL + Sbjct: 1 MSILVCGGAGYIGSHVVKYLLEKNEDVVVIDSLITGHVDAVDEKAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVSEPLKYFENNFYGTLCLLKVMKAHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y S + Sbjct: 121 YGEAESMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAHPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 +R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ G + + + + G + I + P +A PA Sbjct: 241 RNGGDSQIFNLGNGEGFS-----VKEVIEVTRKVTG-----HPIPAEVSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K +T Sbjct: 289 LIASSQKALDTLKWVP 304 >gi|161507824|ref|YP_001577788.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260103110|ref|ZP_05753347.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|160348813|gb|ABX27487.1| UDP-galactose 4-epimerase [Lactobacillus helveticus DPC 4571] gi|260083091|gb|EEW67211.1| UDP-glucose 4-epimerase [Lactobacillus helveticus DSM 20075] gi|323466153|gb|ADX69840.1| UDP-glucose 4-epimerase [Lactobacillus helveticus H10] gi|328464842|gb|EGF36149.1| UDP-galactose 4-epimerase [Lactobacillus helveticus MTCC 5463] Length = 330 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/329 (16%), Positives = 115/329 (34%), Gaps = 56/329 (17%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 MK LVIG G I ++ + + +++ + R +D + + Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ +P + N G ++ +A + + ++ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVKYLVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + + PI E +P NP+N YG++K+ E+ +A I TA Y Sbjct: 121 YGIPKKLPITEDTPLNPINPYGETKMMMEKIMAWADKADGIKYTALRYFNVAGASSDGSI 180 Query: 152 ---SIFGSNFLLSMLRLAKERR-EISVVCDQFGT--PTSALQIARA---IIQIAHNLIEN 202 ++ + ++L+ A + ++ D + T T+ + I L Sbjct: 181 GEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNVRDYVQVEDLIDAHILALKHM 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR---PA 259 T+ +F++ G + I + + G Y R P Sbjct: 241 MKTNKSDVFNLGTAHGYSN-----LEILESAKKVTGIDIP--------YTMGPRRGGDPD 287 Query: 260 YSCLDCSKLANTHNIRISTWKEGVRNILV 288 D +K + E V +++ Sbjct: 288 SLVADSTKARTVLGWKPKH--ENVDDVIA 314 >gi|23013428|ref|ZP_00053323.1| COG1088: dTDP-D-glucose 4,6-dehydratase [Magnetospirillum magnetotacticum MS-1] Length = 354 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 110/338 (32%), Gaps = 67/338 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLL 37 M+ LV G G I +L VQD E++ + D+ Sbjct: 1 MRILVTGGCGFIGSALVLHLVQDLGHEVLTLDALTYAANPISLAPLSDNPNHRLEQADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG----- 92 P + + +F PD +++ AA + VD++ +P N G + A + Sbjct: 61 DPARVHALYAAFKPDAVMHLAAESHVDRSITDPGAFVRTNVIGTQVMLDGARTHWESLSD 120 Query: 93 -----IPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 +++STD V+ E S +P + Y SK A + ++ Y Sbjct: 121 QAKARFRFLHVSTDEVYGSLPPEAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 ++ + Y F + M+ A E + + V D AR ++ + Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILAALEGKPLPVYGDGLNERDWIHVEDHARGLVAVLER 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFA-----EYIFWESAERGGPYSKVYRIFTKQYPT 253 + + GG + A F GP+ ++ I Sbjct: 241 GRVGE------TYLL---GGRSVRNNLAVVKGLCAAFDRLRPENGPHERL--IT-----F 284 Query: 254 KAHRPAYSC---LDCSKLANTHNIRIST-WKEGVRNIL 287 A RP + +D SK R + ++E + + Sbjct: 285 VADRPGHDRRYAIDPSKAEAEVGWRPTKVFEEALEETV 322 >gi|291615362|ref|YP_003525519.1| dTDP-glucose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] gi|291585474|gb|ADE13132.1| dTDP-glucose 4,6-dehydratase [Sideroxydans lithotrophicus ES-1] Length = 355 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 115/330 (34%), Gaps = 53/330 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQD--VEIIRVGR---------------------PDIDLLK 38 K LV G G I ++ + D ++ V + +D+ Sbjct: 3 KTLVTGGAGFIGSAVIRQFINDTACSVVNVDKLTYAGNLQSLASVSDNPRYRFEQVDICD 62 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA---------- 88 + A F PD +++ AA + VD++ P N G + +AA Sbjct: 63 AAEVARVFREHQPDAVMHLAAESHVDRSISGPADFIQTNIIGTYTLLEAARGYWNSLDGE 122 Query: 89 DSIGIPCIYISTDYVFDGLSRT-PIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 G +ISTD V+ L T E + P + Y SK + + V ++ + Y V Sbjct: 123 RKAGFRFHHISTDEVYGSLGDTGFFTEETAYEPNSPYSASKASSDHLVRAWHHTYGFPVV 182 Query: 144 ILRTAWVYSIFG--SNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHNL 199 + Y + + ++ A + + + D ARA+ + Sbjct: 183 TTNCSNNYGPYHFPEKLIPLVILNAVNGKPLPIYGKGDNIRDWLYVDDHARALRLVLERG 242 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFA-EYIFWESAERGGPYSKVYRIFTKQYPTKAHRP 258 + +T G ++ + V A E +G P++K+ + P R Sbjct: 243 -KLGETYNIGGWNEKTNLEVV----LAICAALDELRPQGAPHNKLI-TYVADRPGHDKR- 295 Query: 259 AYSCLDCSKLANTHNIRIS-TWKEGVRNIL 287 Y+ D +KLA + T++ G+R + Sbjct: 296 -YAI-DATKLARDLGWKPQETFETGLRKTV 323 >gi|78043738|ref|YP_359403.1| UDP-glucose 4-epimerase [Carboxydothermus hydrogenoformans Z-2901] gi|77995853|gb|ABB14752.1| UDP-glucose 4-epimerase [Carboxydothermus hydrogenoformans Z-2901] Length = 327 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 56/314 (17%), Positives = 102/314 (32%), Gaps = 53/314 (16%) Query: 3 CLVIGNNGQIAQSLSS-MCVQDVEIIRVG------------RPDI---DLLKPKDFASFF 46 LV G G I + +C+++ +++ V R + D F Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKLIVGDFGDENLLLEIF 61 Query: 47 LSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCIYISTDYVFD 105 + +I+ AA + V ++ +PE F N ++ K + ++ ST V+ Sbjct: 62 KKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAAVYG 121 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY-------------- 151 + PI E P P N+YG SKL E+ + Y + + Y Sbjct: 122 EPEKWPITEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAGADPSGDIGE 181 Query: 152 --SIFGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENSDT 205 + L + E+ E++V + TP T + + + + Sbjct: 182 DHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEAHILALNKLNK 241 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY-SCL- 263 G++++ G + I + E G KV Y RP + L Sbjct: 242 DESGVYNLGNQKGFS-----VKEIIKVAEEVTGVKVKVR------YGQ--RRPGDPAVLV 288 Query: 264 -DCSKLANTHNIRI 276 K+ N Sbjct: 289 ASSEKIQKELNFTP 302 >gi|298243406|ref|ZP_06967213.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] gi|297556460|gb|EFH90324.1| NAD-dependent epimerase/dehydratase [Ktedonobacter racemifer DSM 44963] Length = 309 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 61/323 (18%), Positives = 105/323 (32%), Gaps = 55/323 (17%) Query: 1 MKCLVIGNNGQIAQSLS-SMCVQDVEIIRVG---------------RPDI---DLLKPKD 41 M+ LV G G I + E+ V + + D+ + Sbjct: 1 MRILVTGGAGFIGSHIVDHYIAAGHEVAVVDNLWSHGGGNLANLNPQAQLFRADITDEES 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYIST 100 A F + P+ + + AA +V + +P++ +N G +I +G I+ S+ Sbjct: 61 LAHIFDAVKPETVCHQAAQHSVVVSTKDPKLDAHVNVFGLLSILNNCTRVGTRKIIFASS 120 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTN----NYVILRTAWVYSIFGS 156 + P+DE P + YG +K+ E + + Y LR VY Sbjct: 121 GATYGTPMCLPVDEDVMQRPESPYGITKMVAEHYLRYWHEANGLTYTALRYGNVYGPRQD 180 Query: 157 N-----FLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRG 209 + R + + + D Q +ARA +Q + D + Sbjct: 181 PNGEAGVIAIFARRFLTHQPVRIDWDGEQSKDYVYVADVARANVQ----ALTRGDNEVFC 236 Query: 210 IFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAY---SCLDCS 266 I G VS I+ A G ++ R RP S +C Sbjct: 237 I----GTGEAVSVNG----IYKTLAAVTGYEPEIVRAP--------KRPGDLYKSQFNCG 280 Query: 267 KLANTHNIRI-STWKEGVRNILV 288 K + +++EGVR L Sbjct: 281 KAERLLGWKPEVSFEEGVRATLA 303 >gi|217963421|ref|YP_002349099.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290892640|ref|ZP_06555632.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|217332691|gb|ACK38485.1| UDP-glucose 4-epimerase [Listeria monocytogenes HCC23] gi|290557700|gb|EFD91222.1| UDP-glucose 4-epimerase [Listeria monocytogenes FSL J2-071] gi|307572004|emb|CAR85183.1| galE [Listeria monocytogenes L99] Length = 327 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/316 (18%), Positives = 110/316 (34%), Gaps = 48/316 (15%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEII-----RVGRPD----------IDLLKPKDFAS 44 M +V+G G I ++ + + E++ R G + D+ +S Sbjct: 1 MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHKKAKFYEGDIRDKAFLSS 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 F + D +I+ AA + V ++ + P + + N G + + + G+ ++ S+ Sbjct: 61 VFEKETVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLEVMEQFGVKHIVFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + R PI E PTNP + YG++KL E+ + +Y YV LR V + Sbjct: 121 YGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYDMKYVALRYFNVAGAKADGSI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARA---IIQIAHNLIEN 202 + +R ++++ D + TP T + I L Sbjct: 181 GEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIKALEYL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ + G F+ E+A I + P +A P Sbjct: 241 KNGGESNIFNLGSSNG------FSVKEMLEAAR----SVTGKEIPAEVVPRRAGDPGTLI 290 Query: 263 LDCSKLANTHNIRIST 278 K + Sbjct: 291 ASSDKAREILGWEPTY 306 >gi|4240415|gb|AAD13546.1| NDP-hexose 4,6-dehydratase homolog [Streptomyces cyanogenus] Length = 326 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 105/323 (32%), Gaps = 53/323 (16%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDV-------EIIRVG-------RPDI------------D 35 K L+ G G I + D + + R ++ D Sbjct: 3 KILITGGAGFIGSHYVRTLLNDGYEDWKGAHVTVLDKLTYAGNRDNLPEAHPRLTFVQGD 62 Query: 36 LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA-ADSIGIP 94 + + D +++ AA + VD++ + E N G + A + Sbjct: 63 ICDFELLLELLPGH--DAVVHFAAESHVDRSLESAEEFVHTNVTGTQRLLDAVLATRVKR 120 Query: 95 CIYISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYV----ILRTAWV 150 +++STD V+ + E P P + Y SK A + SY + I R + Sbjct: 121 VVHVSTDEVYGSIDEGSWTEEWPLAPNSPYSASKAASDLLARSYWRTHGLDLSITRCSNN 180 Query: 151 YSIFGSNFLLSMLRL--AKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTS 206 Y + L L + E ++ + D RAI + + Sbjct: 181 YGPYQHPEKLIPLFVTNLLEGEQVPLYGDGGNIREWLHVDDHCRAIDLVLNKGRAGE--- 237 Query: 207 LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSCLDCS 266 I+++ + A I A G +SKV + KAH YS LD S Sbjct: 238 ---IYNIGGGNEQTNRAITERLI----ALTGQDWSKVRHVP----DRKAHDLRYS-LDES 285 Query: 267 KLANTHNIRIS-TWKEGVRNILV 288 K+ T+++G+ + + Sbjct: 286 KIREELGYAPRITFEQGLADTVA 308 >gi|170748797|ref|YP_001755057.1| dTDP-glucose 4,6-dehydratase [Methylobacterium radiotolerans JCM 2831] gi|170655319|gb|ACB24374.1| dTDP-glucose 4,6-dehydratase [Methylobacterium radiotolerans JCM 2831] Length = 349 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/339 (16%), Positives = 109/339 (32%), Gaps = 67/339 (19%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD--VEIIRVG------------------RP---DIDLL 37 M+ LV G G I +L V D ++ + R + D+ Sbjct: 1 MRILVTGGCGFIGSALVLHLVNDLGHDVCTLDAMTYAANPVSLAPLADNPRHRLVEADIC 60 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAK----------A 87 + F P+ +++ AA + VD++ +P N G + Sbjct: 61 DRAAVQKAYADFKPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQTMLDGARGHYETLPE 120 Query: 88 ADSIGIPCIYISTDYVFDG-LSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY---- 142 A+ +++STD V+ E S +P + Y SK A + ++ Y Sbjct: 121 AEKRTFRFLHVSTDEVYGSLPPDAFFTEESRYDPRSPYSASKAASDHLARAWHETYGLPV 180 Query: 143 VILRTAWVYSI--FGSNFLLSMLRLAKERREISVVCDQFGTP--TSALQIARAIIQIAHN 198 ++ + Y F + M+ A E +++ V D A+ ++ + Sbjct: 181 LVTNCSNNYGPRHFPEKLIPLMILNALEGKKLPVYGDGLNERDWIHVEDHAKGLVAVLER 240 Query: 199 LIENSDTSLRGIFHMTADGGPVSWADFA-----EYIFWESAERGGPYSKVYRIFTKQYPT 253 + + GG + A F +G P+ ++ Sbjct: 241 GRIGE------TYLL---GGRAVRNNLAVVKALCAAFDRLRPQGAPHEQLIS-------F 284 Query: 254 KAHRPAYSC---LDCSKLANTHNIRIS-TWKEGVRNILV 288 A RP + +DC+K R T+++ + + Sbjct: 285 VADRPGHDRRYAIDCTKAETELGWRPQKTFEQALEETVA 323 >gi|260495347|ref|ZP_05815474.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] gi|260197125|gb|EEW94645.1| UDP-glucose 4-epimerase [Fusobacterium sp. 3_1_33] Length = 329 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 109/316 (34%), Gaps = 52/316 (16%) Query: 1 MKCLVIGNNGQIAQSLSS-MCVQDVEIIRVG------------RPDI---DLLKPKDFAS 44 M LV G G I + + ++ +++ V R + DL + Sbjct: 1 MSILVCGGAGYIGSHIVKYLLEKNEDVVVVDNLITGHVDAVDERAHLELGDLKDEEFLNR 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + D +I+ AA++ V ++ EP F N G + K + ++ ST Sbjct: 61 VFEKYQIDGVIDFAAFSLVGESVGEPLKYFENNFYGTLCLLKVMKNHNVDKIVFSSTAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY----SIFGSNFL 159 + PI E T P N YG+SKLA E+ N Y + TA Y + S + Sbjct: 121 YGEAENMPILETDRTEPTNPYGESKLAVEKMFKWCANAYGLKYTALRYFNVAGAYPSGEI 180 Query: 160 LSMLR------------LAKERREISVVCDQFGTP--TSALQIARAI-IQIAHNLIEN-- 202 +R +IS+ D + TP T + + AH L N Sbjct: 181 GEAHTCETHLIPLILQVALGQREKISIYGDDYPTPDGTCIRDYIHVMDLADAHYLALNRL 240 Query: 203 SDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPAYSC 262 + IF++ G + + + + G + I + P +A PA Sbjct: 241 RNGGDSQIFNLGNGEGFS-----VKEVIEVTRKVTG-----HPIPAELSPRRAGDPA--R 288 Query: 263 L--DCSKLANTHNIRI 276 L K + + Sbjct: 289 LIASSKKAIDELKWKP 304 >gi|157373248|ref|YP_001471848.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] gi|157315622|gb|ABV34720.1| dTDP-glucose 4,6-dehydratase [Shewanella sediminis HAW-EB3] Length = 367 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 110/324 (33%), Gaps = 62/324 (19%) Query: 3 CLVIGNNGQIAQSLSSMCVQD--VEIIRVGR-------PDI--------------DLLKP 39 LV G G I +L + + +I + + + D+ Sbjct: 9 VLVTGGAGFIGSALVRFLINETSHRVINLDKLTYAGNLESLTSIESNERYHFILGDICDR 68 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKA----------AD 89 + PD+I++ AA + VD++ D P+ N G + +A Sbjct: 69 PLVDDILKRYQPDIIMHLAAESHVDRSIDGPDEFIQTNILGTYTLLEASRSYLAELEGCK 128 Query: 90 SIGIPCIYISTDYVFDGLSRTP-IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VI 144 +ISTD V+ L T E SP NP + Y SK A + V ++ + VI Sbjct: 129 QQDFRFHHISTDEVYGDLGETGLFTEQSPYNPSSPYSASKAASDHLVRAWCRTFQLPVVI 188 Query: 145 LRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLI 200 + Y F + ++ A E + + V D Q ARA+ ++A + Sbjct: 189 TNCSNNYGPFQFPEKLIPLVILNALEGKPLPVYGDGKQVRDWLYVDDHARALYKVATDGK 248 Query: 201 ENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYP---TKAH- 256 S T G ++ + ++ ++ + +++ T Sbjct: 249 PGS-TYNIGGYNEKQNIDVIT----------TICDQLNSLIESKPSGIEEFNQLITYVKD 297 Query: 257 RP----AYSCLDCSKLANTHNIRI 276 RP Y+ D +K+ N + Sbjct: 298 RPGHDLRYAI-DATKIKNELGWKP 320 >gi|294675733|ref|YP_003576348.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] gi|294474553|gb|ADE83941.1| dTDP-glucose 4,6-dehydratase [Rhodobacter capsulatus SB 1003] Length = 353 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/339 (16%), Positives = 107/339 (31%), Gaps = 61/339 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMC-VQDVEIIRVGR---------------------PDIDLLK 38 MK LV G G I ++ + + ++ V D+ Sbjct: 5 MKILVTGGAGFIGSAVVRLAIARGHAVVNVDALTYAACLDNVASVAGSPLYAFEQADIRD 64 Query: 39 PKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG------ 92 + PD +++ AA + VD++ D P + N G + +AA Sbjct: 65 GAAILAILDRHQPDAVMHLAAESHVDRSIDGPGVFIETNVMGTYQMLQAARQHWEGRGRP 124 Query: 93 --IPCIYISTDYVFDGLSRTP---IDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----V 143 +ISTD VF L P E +P +P + Y SK + V ++ Y + Sbjct: 125 GTFRFHHISTDEVFGSLPHDPQVKFTEDTPYDPRSPYSASKAGSDHLVRAWHETYGLPVL 184 Query: 144 ILRTAWVYSIFG--SNFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNL 199 + + Y F + ++ A + + + D A A++ + Sbjct: 185 LTNCSNNYGPFHFPEKLIPVIILNALAGKALPIYGDGSNIRDWLYVEDHADALLTVVEKG 244 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP- 258 ++ G T + + + G ++ + RP Sbjct: 245 AVGRSYNIGGENERTNLELVRTLCEILDR--KRPKASGSYADQITFVTD--------RPG 294 Query: 259 ---AYSCLDCSKLANTHNIRIS-TWKEGVRN----ILVN 289 Y+ D +++ R S T +EG+ L N Sbjct: 295 HDARYAI-DPTRIRTELGWRPSVTVEEGLERTVDWYLAN 332 >gi|119718949|ref|YP_919444.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] gi|119524069|gb|ABL77441.1| NAD-dependent epimerase/dehydratase [Thermofilum pendens Hrk 5] Length = 308 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 111/317 (35%), Gaps = 50/317 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCV-QDVEII--------RVGRPDI----------DLLKPKD 41 M + G G I + + + +++ VGR D+ D+ + Sbjct: 1 MNVGITGGAGFIGFNTARYLASRGFQVVVLDDFSRATVGREDLEKVGAEVYEGDVRDAEA 60 Query: 42 FASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGA-IAKAADSIGIPCIYIST 100 F D +I+ AA V ++E+ PE +S+N EG A +A+A+ + ++ S+ Sbjct: 61 LRRFLSGV--DAVIHLAALVDVRESEERPEEYWSVNVEGTRALLAEASRAGVRKVVFASS 118 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVYSIF----GS 156 V+ L E P + YG +K GEE ++ V+ +++++ Sbjct: 119 AAVYGDLGGLTAGEEVDARPKSFYGLTKRVGEELCRFFSGRGVVCVALRIFNVYGEYSRR 178 Query: 157 NFLLSMLRLAKERREISVVCD--QFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMT 214 + R + V D Q +ARA + + Sbjct: 179 GVIYEFARRVLSGLPVKVYGDGNQTRDFVYVGDVARAFEAVIAEWSGGFEVFN------V 232 Query: 215 ADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRP---AYSCLDCSKLANT 271 A G VS + + +R G + A RP SC K A Sbjct: 233 ASGRCVSVNELVRLFEQVTGKRVGVLRE-----------PA-RPEEIRRSCASTEKAARM 280 Query: 272 HNIRI-STWKEGVRNIL 287 R ++ +EGVR ++ Sbjct: 281 LGFRASTSLEEGVRRVV 297 >gi|237719472|ref|ZP_04549953.1| nucleotide sugar epimerase [Bacteroides sp. 2_2_4] gi|229451332|gb|EEO57123.1| nucleotide sugar epimerase [Bacteroides sp. 2_2_4] Length = 355 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 53/342 (15%), Positives = 102/342 (29%), Gaps = 70/342 (20%) Query: 3 CLVIGNNGQIAQSLSSMCV---QDVEIIRVGR-----------------PDID------- 35 LV G G I +L +++ +I + +D Sbjct: 13 VLVTGAAGFIGSNLVMRLFHDFRNIRVIGIDSITDYYDVNIKYERLKEIESLDRDWIFVR 72 Query: 36 --LLKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG- 92 + F V++N AA V + P+ N G I +A Sbjct: 73 ASIADKDAVERIFSENKISVVVNLAAQAGVRYSITNPDAYVQSNLIGFYNILEACRHYEV 132 Query: 93 IPCIYISTDYVFDGLSRTPIDEFSPT-NPLNIYGKSKLAGEEKVASYTNNYVILRTAW-- 149 +Y S+ V+ + P NP+++Y +K + E +Y+ Y I T Sbjct: 133 EHLVYASSSSVYGSNKKVPYSTDDKVDNPVSLYAATKKSNELMAHAYSKLYNIPSTGLRF 192 Query: 150 --VYSIFGSNFLLSMLRLAK--ERREISVVCDQFGTP----TSALQIARAIIQIAHNLIE 201 VY G + K + I + +G T I +++I + E Sbjct: 193 FTVYGPAGRPDMAYFGFTDKLVKGETIKIFN--YGNCKRDFTYVDDIVEGVVRIIQHAPE 250 Query: 202 NSDTS------LRGIFHMTADGGPVSWADFAEYIFWESAERGGPYS---------KVYRI 246 + ++++ + + DF I E ++ + Sbjct: 251 KRNGEDGLPIPPYKVYNIGNNSPE-NLLDF-VTILQEELICANILPQDYDFEAHKELVPM 308 Query: 247 FTKQYP-TKAHRPAYSCLDCSKLANTHNIRI-STWKEGVRNI 286 P T A D + L + ++ ++G+R Sbjct: 309 QPGDVPITYA--------DTTPLEQDFGFKPSTSLRDGLRAF 342 >gi|212703423|ref|ZP_03311551.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] gi|212673168|gb|EEB33651.1| hypothetical protein DESPIG_01467 [Desulfovibrio piger ATCC 29098] Length = 244 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 83/241 (34%), Gaps = 36/241 (14%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVGRPDI---------------DLLKPKDFAS 44 M LV G G I ++ ++ E++ V D+ Sbjct: 1 MAILVCGGAGYIGSHAVHALAAAGQEVVVVDNLQTGHAAAVAGKAAFVQGDIRDAACLDD 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGI-PCIYISTDYV 103 F F D +++ AA + V ++ P F+ N G ++ +A G+ ++ S+ V Sbjct: 61 IFRRFRIDGVMHFAADSQVGESMVNPLKYFNNNVGGMQSLLEAMVRHGVGRIVFSSSAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E +PT P N YG SKL E + + + I + Y Sbjct: 121 YGEPDSVPISEDAPTRPTNPYGHSKLMMEAMMRWVSAAHGIRYVSLRYFNVAGALADGSI 180 Query: 152 -SIFGSNFLLSMLRL---AKERREISVVCDQFGTP--TSALQIARAIIQIAHNLIENSDT 205 L L L +R I++ D + TP T A+ + E Sbjct: 181 GEDHSPESHLIPLVLQVPLGQRPHITIFGDDYATPDGTCIRDYI-AVTDLVDAPCEGPGP 239 Query: 206 S 206 S Sbjct: 240 S 240 >gi|149634948|ref|XP_001512139.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 406 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 112/328 (34%), Gaps = 60/328 (18%) Query: 2 KCLVIGNNGQIAQSLSSMCVQDVE---IIRVGRPDI---------------------DLL 37 + LV G G IA + V++ II + + D D+ Sbjct: 69 RVLVTGGAGFIASHVILSLVENYPNYIIINLDKLDYCASLKNLETISNKQNYKFIKGDIC 128 Query: 38 KPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAA-DSIGIPCI 96 + F + D++++ AA T VD + +N G + AA ++ I Sbjct: 129 EAPFVKHLFETEKIDIVLHFAAQTHVDLSFVRTLEFTYVNVYGTHVLVSAAHEARVEKFI 188 Query: 97 YISTDYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYS 152 Y+STD V+ G DE SP P N Y SK A E V SY Y VI R++ VY Sbjct: 189 YVSTDEVYGGSLDQEFDESSPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYG 248 Query: 153 I--FGSNFLLSMLRLAKERRE--ISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLR 208 + + + L + R+ I Q A + A + + N Sbjct: 249 PHQYPEKVIPKFISLLQHNRKCCIHGSGLQKRNFLYATDVVEAFLTVLKNGKPGE----- 303 Query: 209 GIFHMTADGGPVSWADFAEYIFWESAERGGPYSK------VYRIFTKQ--YPTKAHRPAY 260 I+++ + +S A+ + E V + YP K Sbjct: 304 -IYNIGTNF-EMSIMQLAKELIQLIKETSTESETENWVDFVNDRPSNDMRYPMK------ 355 Query: 261 SCLDCSKLANTHNIRIS-TWKEGVRNIL 287 K+ R WKEG++ + Sbjct: 356 ----SEKMHG-LGWRPKVPWKEGIKKTI 378 >gi|20799640|gb|AAM28584.1|AF503446_7 UDP glucose 4-epimerase [Streptococcus thermophilus LMG 18311] Length = 336 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 39/228 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVG----------RPDI-----DLLKPKDFA 43 M LV+G G I + V+ + ++ V PD DL Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 44 SFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 F +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I + ST Sbjct: 61 KVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMIKLLEVMNECGVKYIVFSST 119 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGS 156 + PI E +P NP+N YG+SKL E + +Y YV LR V Sbjct: 120 AATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGAKPD 179 Query: 157 -----------NFLLSMLRLAKE-RREISVVCDQFGTP--TSALQIAR 190 + L +L++A+ R +I + D + TP T+ Sbjct: 180 GSIGEDHDPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVH 227 >gi|91782062|ref|YP_557268.1| putative epimerase/dehydratase [Burkholderia xenovorans LB400] gi|91686016|gb|ABE29216.1| Putative epimerase/dehydratase [Burkholderia xenovorans LB400] Length = 318 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 32/267 (11%) Query: 3 CLVIGNNGQIAQSLSS-MCVQDVEIIRVGRPD----------IDLL-KPKDFASFF-LSF 49 LV G NG + +L + + + R +D+ D + + + Sbjct: 4 VLVTGANGFVGHALCRALLNAGHTVTGLVRRSGQLESDVNEWVDVSVDFADVDATWPAAL 63 Query: 50 SPDVIINPAAYTAVDKAED-EPEIAFS-INAEGAGAIAKAADSIG-IPCIYIST-DYVFD 105 D +++ AA V + E +P+ AF N +GA +A+AA G +++S+ + + Sbjct: 64 QVDCVVHLAARVHVMREESADPDAAFRATNVDGALRVAQAARRHGVRRFVFVSSVKALAE 123 Query: 106 GLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILRTAWVYSIFGS-NFLL 160 G S P+ E P P + YG+SKLA E+ + SY VI+R VY NFL Sbjct: 124 GDSGRPVCEDDPPMPQDAYGRSKLAAEQALCSYGEESGLDVVIVRPPLVYGPQVRANFLR 183 Query: 161 SMLRLAKERREISVVCDQFGTPTSALQIARAIIQIAHNLIENSDTSLRGIFHMTADGGPV 220 M + K D + +A A++ A + + FH+ P Sbjct: 184 LMDAVWKGMPLPLASIDARRSLIYVGNLADALMHCAVD-----PRAAYQCFHVADAAAPT 238 Query: 221 SWADFAEYIFWESAERGGPYSKVYRIF 247 A+ A + A S++ + Sbjct: 239 -VAELARSL----AGYLQKTSRLLPVP 260 >gi|326798472|ref|YP_004316291.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium sp. 21] gi|326549236|gb|ADZ77621.1| dTDP-glucose 4,6-dehydratase [Sphingobacterium sp. 21] Length = 346 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 79/247 (31%), Gaps = 38/247 (15%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDV---EIIRVGR----------PDI-----------DL 36 M ++ G G I + V + II + + DI D+ Sbjct: 1 MNIIITGGAGFIGSHVVRRFVNNYPQYHIINLDKLTYAGNLANLSDIEDQVNYEFVKGDI 60 Query: 37 LKPKDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG---- 92 F PD +I+ AA + VD++ P N G + AA Sbjct: 61 TDAAFINELFERVKPDAVIHLAAESHVDRSISNPLDFVLTNVVGTVNLLNAARKCWEGDS 120 Query: 93 -IPCIYISTDYVFDGLSR-TPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNY----VILR 146 ++STD V+ L E + +P + Y SK + + V +Y + Y VI Sbjct: 121 SKRFYHVSTDEVYGALGESGMFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLNTVISN 180 Query: 147 TAWVYSIFG--SNFLLSMLRLAKERREISVV--CDQFGTPTSALQIARAIIQIAHNLIEN 202 + Y + + K + + V + ARAI I H Sbjct: 181 CSNNYGSHHFPEKLIPLAIHNIKNNKPVPVYGKGENVRDWLWVEDHARAIDVIFHQAKAG 240 Query: 203 SDTSLRG 209 ++ G Sbjct: 241 DTYNIGG 247 >gi|52082565|ref|YP_081356.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52787960|ref|YP_093789.1| hypothetical protein BLi04283 [Bacillus licheniformis ATCC 14580] gi|319648442|ref|ZP_08002658.1| hypothetical protein HMPREF1012_03697 [Bacillus sp. BT1B_CT2] gi|52005776|gb|AAU25718.1| UDP-glucose 4-epimerase [Bacillus licheniformis ATCC 14580] gi|52350462|gb|AAU43096.1| hypothetical protein BLi04283 [Bacillus licheniformis ATCC 14580] gi|317389521|gb|EFV70332.1| hypothetical protein HMPREF1012_03697 [Bacillus sp. BT1B_CT2] Length = 333 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 58/332 (17%), Positives = 108/332 (32%), Gaps = 60/332 (18%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG----------RPDI-----DLLKPKDFAS 44 M LV+G G I ++ + + ++ V PD D+ + Sbjct: 1 MSVLVLGGAGYIGSHAVYQLIDRGENVVVVDNLETGQRQAVHPDAIFYEGDVRDRDFLRT 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 F + +I+ AA + V ++ +P + N G + +A ++ ST V Sbjct: 61 VFEKERIEEVIHFAASSLVGESMKDPLKYYDNNVSGTQVLLQAMLEHDVKKIVFSSTAAV 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------ 151 + PI E PT P + YG++KL E+ + + I + Y Sbjct: 121 YGEPESLPITEDMPTMPTSTYGETKLIMEKLMKRTEEAHGISFVSLRYFNVAGARETGEI 180 Query: 152 ----SIFGSNFLLSMLRLAKERREISVVCDQFGTP--------TSALQIARAIIQIAHNL 199 L + +R I++ D + TP + A + L Sbjct: 181 GEDHRPETHLVPLILQTALGQRPHITIFGDDYDTPDGTCIRDYVHVEDLIDAHLSALDYL 240 Query: 200 IENSDTSLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHRPA 259 + + IF++ + G F+ ++A + I + +A P Sbjct: 241 RKGGKSD---IFNLGSSEG------FSVKEMIDAARKATGKD----ITAEIGKRRAGDP- 286 Query: 260 YSCL--DCSKLANTHNIRISTWKEGVRNILVN 289 S L K R S + V I+ + Sbjct: 287 -SILIAGSHKAKQVLGWRPS--RTSVAKIIED 315 >gi|295425264|ref|ZP_06817967.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] gi|295065040|gb|EFG55945.1| UDP-glucose 4-epimerase [Lactobacillus amylolyticus DSM 11664] Length = 306 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 17/168 (10%) Query: 1 MKCLVIGNNGQIA-QSLSSMCVQDVEIIRVG------RPDID---------LLKPKDFAS 44 M+ LVIG G I ++ + + +++ + R +D + + Sbjct: 1 MRVLVIGGAGYIGSHAVKKLVAEGDDVVVLDALYTGHRKAVDPKAKFYQGDIEDTFLVSK 60 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYV 103 D +++ AAY+ V ++ P + N G ++ +A + G I+ S+ Sbjct: 61 ILRDEKIDAVMHFAAYSLVPESVKRPLKYYDNNVNGMISLLRAMNDAGTKYLIFSSSAAT 120 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY 151 + + PI E +P +P+N YG++K+ E+ +A I TA Y Sbjct: 121 YGVPKKLPITEDTPLDPINPYGETKMMMEKIMAWADKADGIKYTALRY 168 >gi|309389573|gb|ADO77453.1| UDP-galactose 4-epimerase [Halanaerobium praevalens DSM 2228] Length = 325 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 87/257 (33%), Gaps = 41/257 (15%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG--------------RPDIDLLKPKDFASF 45 MK LV G G I L ++ ++I + + DL K Sbjct: 1 MKILVTGGAGYIGSHVLKALLKAKHQVITLDNLQKGHLKAVTGGEFIEGDLADKKLLNQI 60 Query: 46 FLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIP-CIYISTDYVF 104 F + +I+ AA + V ++ P + N + +A + ++ ST V+ Sbjct: 61 FQKNKIEGVIHLAADSLVGESMQNPAKYYRNNFNNGINLLEAMVKNDVKNIVFSSTAAVY 120 Query: 105 DGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY------------- 151 PI E +PT P N YG+SKL E+ + Y + + + Y Sbjct: 121 GEPKEIPIKEDNPTQPTNTYGESKLFFEKALKRYQQIHDLNFISLRYFNAAGADPEIEIG 180 Query: 152 ---SIFGSNFLLSMLRLAKERREISVVCDQFGTPTSALQIARAIIQI-------AHNLIE 201 S L + K R +I + D + PT R I + L Sbjct: 181 EAHSPETHLIPLVLDTALKIRDKIYIFGDDY--PTRDGSCIRDYIHVNDLASAHLLALKA 238 Query: 202 NSDTSLRGIFHMTADGG 218 ++ I+++ G Sbjct: 239 LANGHKSAIYNLGNGAG 255 >gi|117928883|ref|YP_873434.1| UDP-galactose 4-epimerase [Acidothermus cellulolyticus 11B] gi|117649346|gb|ABK53448.1| UDP-galactose 4-epimerase [Acidothermus cellulolyticus 11B] Length = 329 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 109/328 (33%), Gaps = 59/328 (17%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQD-VEIIRVG------RPDI---------DLLKPKDFAS 44 MK LV G G I ++ + ++D +++ + R + D+ D Sbjct: 1 MKVLVTGGAGYIGSVVTRVLIEDGHDVVVLDDLSTGHRDAVPAGVPFVHADIADAGDV-- 58 Query: 45 FFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYISTDYV 103 D +++ AA + V ++ + PE+ ++ N G + A I+ ST V Sbjct: 59 -LAREPFDGVLHFAAKSLVGESMNRPELYWATNVCGTRHLLDAMRRHSVPRLIFSSTAAV 117 Query: 104 FDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKV----ASYTNNYVILRTAWVYSIFGSNFL 159 + I E +P P + YG SKLA + + +Y V LR V +G Sbjct: 118 YGEGGPDGIGEDTPPRPTSPYGTSKLAVDLMISDECRAYPLGAVSLRYFNVAGAYGPCGE 177 Query: 160 LSMLR----------LAKERREISVVCDQFGTP--TSALQIARA--IIQIAHNLIENSDT 205 A R + + + + TP T + + ++++ Sbjct: 178 RHRTETHLIPITLDVAAGRRPHLEIYGNDWPTPDGTCMRDYIHVLDLARAHVVALQHARP 237 Query: 206 SLRGIFHMTADGGPVSWADFAEYIFWESAERGGPYSKVYRIFTKQYPTKAHR----PAYS 261 I+++ G + G V T A R PA+ Sbjct: 238 GHHAIYNLGNGRGFS-----VREVVAAVERVTGRRVPV---------TVAPRRPGDPAWL 283 Query: 262 CLDCSKLANTHNIRISTWKEGVRNILVN 289 D S+ N + + + I+ + Sbjct: 284 VADDSRARAELNWQP---QADLDTIIAD 308 >gi|120925|sp|P21977|GALE_STRTR RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|153749|gb|AAA26944.1| UDPglucose 4-epimerase [Streptococcus thermophilus] Length = 332 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 38/227 (16%) Query: 1 MKCLVIGNNGQIAQSLSSMCVQDVE--IIRVG----------RPDI-----DLLKPKDFA 43 M LV+G G I + V+ + ++ V PD DL Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 44 SFFLSFSPDV--IINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIGIPCI-YIST 100 F +PDV +I+ AAY+ V ++ ++P F N G + + + G+ I + ST Sbjct: 61 KVFKE-NPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSST 119 Query: 101 DYVFDGLSRTPIDEFSPTNPLNIYGKSKLAGEEKVASYTNNYVILRTAWVY--------- 151 + PI E +P NP+N YG+SKL E + Y I Y Sbjct: 120 AATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGANLM 179 Query: 152 -----SIFGSNFLLSMLRLAKE-RREISVVCDQFGTP--TSALQIAR 190 + ++ L +L++A+ R +I + D + TP T+ Sbjct: 180 VRLVRTRSETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVH 226 >gi|315926552|gb|EFV05933.1| UDP-glucose 4-epimerase [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 330 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 105/330 (31%), Gaps = 72/330 (21%) Query: 1 MKCLVIGNNGQIAQS-LSSMCVQDVEIIRVG---------RPDI-----------DLLKP 39 MK L+ G G I L D EI + D+ DL Sbjct: 3 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKTRAFKFFEQDLSDF 62 Query: 40 KDFASFFLSFSPDVIINPAAYTAVDKAEDEPEIAFSINAEGAGAIAKAADSIG-IPCIYI 98 + + F D I++ AA V ++ P + N + +