HHsearch alignment for GI: 254780922 and conserved domain: COG1083
>COG1083 NeuA CMP-N-acetylneuraminic acid synthetase [Cell envelope biogenesis, outer membrane].
Probab=98.61 E-value=3.9e-08 Score=71.20 Aligned_cols=202 Identities=15% Similarity=0.214 Sum_probs=123.2
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7992488874553344389822224783747999999999789-868999977765643111222222221111222333
Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAG-IREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQL 81 (292)
Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~G-i~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~ 81 (292)
T Consensus 6 AiIpAR~gSKgI~------~KNi~~~~gkpLi~~~I~aA~ns~~fd~V-viSsDs-~----~Il~~A~~ygak~~~~Rp~ 73 (228)
T COG1083 6 AIIPARGGSKGIK------NKNIRKFGGKPLIGYTIEAALNSKLFDKV-VISSDS-E----EILEEAKKYGAKVFLKRPK 73 (228)
T ss_pred EEEECCCCCCCCC------CCCHHHHCCCCHHHHHHHHHHCCCCCCEE-EECCCC-H----HHHHHHHHHCCCCCCCCCH
T ss_conf 9976267887687------63357757961589999998658852269-984795-8----9999998727611024874
Q ss_pred CC-CCCC---CCCCCCCCCCCC-CC-CCEEECCC-CCCCCCCCCHHHHHCCCHHHHHCCCCCCCCC-CC-CCCCCCCCCC
Q ss_conf 32-2446---852101112335-67-52132144-3211110000111000001110012222100-01-2221222210
Q gi|254780922|r 82 VP-AGLA---QSYILGAEFIGD-SS-SVLILGDN-VFYGSDISDIFHKARARRNSATVVGCHVQNP-QR-YGVVEVDSSN 152 (292)
Q Consensus 82 ~p-~Gta---~Ai~~a~~~i~~-~~-~~lilgDn-i~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p-~~-yGvv~~d~~~ 152 (292)
T Consensus 74 ~LA~D~ast~~~~lh~le~~~~~~~~~~lLq~TsPLl~~~~ik~A~e~f~~~~~~sl~sa~e~e~~p~k~f----~~~~~ 149 (228)
T COG1083 74 ELASDRASTIDAALHALESFNIDEDTLILLQPTSPLLTSLHIKEAFEKFLNNQYDSLFSAVECEHHPYKAF----SLNNG 149 (228)
T ss_pred HHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH----HHCCC
T ss_conf 54167216789999999874424570688406850001457999999996588763588753223468888----75078
Q ss_pred CHHHCCCCCC-------CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCC
Q ss_conf 0010013333-------322222202455410002243220046753333333432000001320463135412563278
Q gi|254780922|r 153 QAISIEEKPN-------NPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAG 225 (292)
Q Consensus 153 ~i~~i~EKP~-------~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~G 225 (292)
T Consensus 150 ~~~~~~~~~~~~~rrQ~Lpk~Y~~NgaiYi~~~~~l~e~~-----------------~~f~-~~~~~y~m~~~~~-~DID 210 (228)
T COG1083 150 EVKPVNEDPDFETRRQDLPKAYRENGAIYINKKDALLEND-----------------CFFI-PNTILYEMPEDES-IDID 210 (228)
T ss_pred CEEECCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHHHHCC-----------------CEEC-CCCEEEECCCCCC-CCCC
T ss_conf 4410114776554211051656536767975279874157-----------------5415-8966898171200-0566
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 45779999999999
Q gi|254780922|r 226 TPESLLDTAVFVRN 239 (292)
Q Consensus 226 t~e~l~~As~~i~~ 239 (292)
T Consensus 211 ~~~Dl~iae~l~~~ 224 (228)
T COG1083 211 TELDLEIAENLIFL 224 (228)
T ss_pred CHHHHHHHHHHHHH
T ss_conf 08769999998656