HHsearch alignment for GI: 254780922 and conserved domain: PRK00560
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional.
Probab=99.02 E-value=1.3e-09 Score=80.56 Aligned_cols=181 Identities=13% Similarity=0.175 Sum_probs=97.9
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEE-HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 799248887455334438982222478374-799999999978986899997776564311122222222111122233-
Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNKP-MIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQ- 80 (292)
Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gkp-lI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q- 80 (292)
T Consensus 11 ~vILAGGkSsRmG-----~dKall~~~g~~~Lie~~~~~l~~~-~~~i~is~~~~~-~~---~-------~~--~~i~d~ 71 (196)
T PRK00560 11 CVILAGGKSSRMG-----ENKALLPFGSYSSLLEYQYTRLLKL-FKKVYISTKDKK-FE---F-------NA--PFLLEK 71 (196)
T ss_pred EEEECCCCCCCCC-----CCCCCCEECCCCHHHHHHHHHHHHH-CCEEEEECCCHH-HH---C-------CC--CEEECC
T ss_conf 8997378722399-----9862527699555999999998863-676899648136-64---5-------99--888657
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf -3322446852101112335675213214432111100001110000011100122221000122212222100010013
Q gi|254780922|r 81 -LVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQAISIEE 159 (292)
Q Consensus 81 -~~p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i~~i~E 159 (292)
T Consensus 72 ~~~~~GPL~Gi~saL~~~~~~~~~v~~cD~Pfl~~~~i~~L~~--~~~~---------------~~v~~~~~~~~----- 129 (196)
T PRK00560 72 ESDLFSPLFGIHNAFLTLQTPEIFFISVDTPFVSFESIKKLCG--KENF---------------SVTYAKSPTKE----- 129 (196)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH--CCCC---------------CEEEEEECCCC-----
T ss_conf 8898880999999998577786899957888889999999972--2699---------------98999548901-----
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 33332222220245541000224322004675333333343200000132046313541256327845779999999999
Q gi|254780922|r 160 KPNNPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTAVFVRN 239 (292)
Q Consensus 160 KP~~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As~~i~~ 239 (292)
T Consensus 130 ---~P-----L~aly--~~~~l~~l~~~l~--~g~~~l~~~l~~~---~~~~v~~~~~~-~F~NiNTpeD~~~A~~~lk~ 193 (196)
T PRK00560 130 ---HY-----LISLW--HRSLLNALNYALK--TQNYRLSDLVKNS---SSQAVHFEDEE-EFLNLNTLKDYELALQILKS 193 (196)
T ss_pred ---CC-----EEEEE--CHHHHHHHHHHHH--CCCCHHHHHHHHC---CCEEEECCCCC-CCCCCCCHHHHHHHHHHHHH
T ss_conf ---30-----46785--2889999999998--2995199999878---96897459987-42468999999999999872
Q ss_pred H
Q ss_conf 8
Q gi|254780922|r 240 I 240 (292)
Q Consensus 240 ~ 240 (292)
T Consensus 194 ~ 194 (196)
T PRK00560 194 R 194 (196)
T ss_pred C
T ss_conf 3