HHsearch alignment for GI: 254780922 and conserved domain: TIGR02623

>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase; InterPro: IPR013446 Glucose-1-phosphate cytidylyltransferases, also known as CDP-glucose pyrophosphorylase, are the product of the rfbF gene and produce CDP-D-glucose..
Probab=99.97  E-value=8e-32  Score=219.84  Aligned_cols=217  Identities=24%  Similarity=0.366  Sum_probs=173.7

Q ss_pred             CEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             907992488874553344389822224783747999999999789868999977765643111222222221111222--
Q gi|254780922|r    1 MKGIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYI--   78 (292)
Q Consensus         1 MkaiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~--   78 (292)
T Consensus         1 MKaViLAGGlGTRisEEt~lrPKPM~EiGgkPIlWHI~k~Y~~~Gi~~FiiC~GYkG-y~IKeyF~NY~l~~SDvT~~l~   79 (256)
T TIGR02623         1 MKAVILAGGLGTRISEETHLRPKPMVEIGGKPILWHIMKIYSAHGIKEFIICLGYKG-YVIKEYFANYFLHMSDVTIDLE   79 (256)
T ss_pred             CEEEEEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEECCCC-CEEEEECCCCEEECCEEEEEEC
T ss_conf             937997178644322435358976077679637788999997528330278853433-2201001063231131678751


Q ss_pred             --------CCCCC-----------CCCCCCCCCCCCCCC-CCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCC
Q ss_conf             --------33332-----------244685210111233-5675213214432111100001110000011100122221
Q gi|254780922|r   79 --------EQLVP-----------AGLAQSYILGAEFIG-DSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQ  138 (292)
Q Consensus        79 --------~q~~p-----------~Gta~Ai~~a~~~i~-~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~  138 (292)
T Consensus        80 ~n~~~~H~~~~EPW~VTLvDTG~~t~TGGRl~Rv~~~~~~d~~Fc~TYGDGv-~~~~I~~~~~~H~~~g~~AT~tAv~--  156 (256)
T TIGR02623        80 DNTIEVHEKRAEPWRVTLVDTGESTQTGGRLKRVREYLEDDEAFCLTYGDGV-ADIDIKALIAFHRKHGKKATVTAVQ--  156 (256)
T ss_pred             CCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCC-CCCCHHHHHHHHHHCCCCEEEEEEC--
T ss_conf             5704531213897168888568776678327889998437876898715850-3325899999988629806788607--


Q ss_pred             CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCC
Q ss_conf             00012221222210001001333332222220245541000224322004675333333343200000132046313541
Q gi|254780922|r  139 NPQRYGVVEVDSSNQAISIEEKPNNPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREG  218 (292)
Q Consensus       139 ~p~~yGvv~~d~~~~i~~i~EKP~~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g  218 (292)
T Consensus       157 PPGRfGaL~~~~-~~V~~F~EKP~gd-~g~iNGGFFVL~P~V~d~I~~D~~~----wE-~~~L~~L~~~g~L~a-Y~H~G  228 (256)
T TIGR02623       157 PPGRFGALELEG-ESVTSFQEKPLGD-GGLINGGFFVLNPSVLDLIDGDATV----WE-SEPLETLAQRGELSA-YEHSG  228 (256)
T ss_pred             CCCCEEEEEECC-CCEEEECCCCCCC-CEEEECCEEEECCCEEEEECCCCEE----EC-CHHHHHHHHCCCCEE-EEECC
T ss_conf             888302367725-5111101474889-8168065687483202022488502----01-037899974488137-85177


Q ss_pred             EEEECCCCHHHH
Q ss_conf             256327845779
Q gi|254780922|r  219 SAWFDAGTPESL  230 (292)
Q Consensus       219 ~~W~D~Gt~e~l  230 (292)
T Consensus       229 -FW~PMDTLRDk  239 (256)
T TIGR02623       229 -FWQPMDTLRDK  239 (256)
T ss_pred             -CCCCCHHHHHH
T ss_conf             -56852225667