HHsearch alignment for GI: 254780922 and conserved domain: TIGR03202
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=99.35 E-value=9.7e-13 Score=100.10 Aligned_cols=184 Identities=17% Similarity=0.230 Sum_probs=107.9
Q ss_pred EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 07992488874553344389822224783747999999999789868999977765643111222-22222111122233
Q gi|254780922|r 2 KGIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLG-SGEKWGVQFSYIEQ 80 (292)
Q Consensus 2 kaiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~-~g~~~g~~i~y~~q 80 (292)
T Consensus 2 ~aiILAAG~S~RmG-----~~KlLl~~~g~~ll~~~~~~~~~~~~~~vvVV~g~~~~~-~~~~~~~~~~~~~~~~v~-n~ 74 (190)
T TIGR03202 2 VAIYLAAGQSRRMG-----ENKLALPLGETTLGSASLKTALSSRLSKVIVVIGEKYAH-LSWLDPYLLADERIMLVC-CR 74 (190)
T ss_pred EEEEECCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHH-HHHHHHHHHCCCCEEEEE-CC
T ss_conf 79997998766899-----884238509911999999999866998199981871888-876678763348749996-89
Q ss_pred CCCCCCCCCCCCCCCCCCC---CCCCEEECCCCCCCC-CCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3322446852101112335---675213214432111-100001110000011100122221000122212222100010
Q gi|254780922|r 81 LVPAGLAQSYILGAEFIGD---SSSVLILGDNVFYGS-DISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQAIS 156 (292)
Q Consensus 81 ~~p~Gta~Ai~~a~~~i~~---~~~~lilgDni~~~~-~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i~~ 156 (292)
T Consensus 75 ~~~~G~~sSi~~Gl~~~~~~~~d~~li~l~D~P~l~~~~i~~L~~~~~~~~~~iv~-------~-~~------------- 133 (190)
T TIGR03202 75 DACEGQAHSLKCGLRKAEAMGADAVVILLADQPFLTADVINALLALAKRRPDDYVA-------A-SF------------- 133 (190)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE-------E-EE-------------
T ss_conf 86546079999999974366889699964897788999999999999858990899-------8-62-------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHH
Q ss_conf 01333332222220245541000224322004675333333343200000132046313541256327845779
Q gi|254780922|r 157 IEEKPNNPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESL 230 (292)
Q Consensus 157 i~EKP~~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l 230 (292)
T Consensus 134 -~g~~G~Pv---------lf~~~~f~~L~~l~----GD~Gar~ll~~~~--~~~~~~~~d~~-~~~DIDTpeDy 190 (190)
T TIGR03202 134 -KGKPRPPI---------LFSKSLFPKLKALK----GDEGARALLRKDK--SGLALPVADAS-AFFDIDTKEDY 190 (190)
T ss_pred -CCCCCCCE---------EECHHHHHHHHHCC----CCHHHHHHHHCCC--CCEEEEECCCC-CCCCCCCHHHC
T ss_conf -89636988---------97799999988378----8745999984177--65699838989-16079884549