HHsearch alignment for GI: 254780922 and conserved domain: cd02538
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=100.00 E-value=0 Score=472.23 Aligned_cols=240 Identities=62% Similarity=1.065 Sum_probs=231.2
Q ss_pred CEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 90799248887455334438982222478374799999999978986899997776564311122222222111122233
Q gi|254780922|r 1 MKGIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQ 80 (292)
Q Consensus 1 MkaiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q 80 (292)
T Consensus 1 MkavILAgG~GtRL~PlT~~~PKpLlpi~~kPli~~~l~~l~~~Gi~~i~iv~~~~~~~~~~~~~~~~~~~~~~i~y~~e 80 (240)
T cd02538 1 MKGIILAGGSGTRLYPLTKVVSKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPEDLPLFKELLGDGSDLGIRITYAVQ 80 (240)
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEECCEEEHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 90999888786678732379874327799997189999999985996231002342699999997447637527999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
Q ss_conf 33224468521011123356752132144321111000011100000111001222210001222122221000100133
Q gi|254780922|r 81 LVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQAISIEEK 160 (292)
Q Consensus 81 ~~p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i~~i~EK 160 (292)
T Consensus 81 ~~~~Gt~~al~~a~~~~~~~~~~v~~gD~i~~~~~~~~~l~~~~~~~~~~ti~~~~v~~~~~yGvv~~d~~~~v~~~~EK 160 (240)
T cd02538 81 PKPGGLAQAFIIGEEFIGDDPVCLILGDNIFYGQGLSPILQRAAAQKEGATVFGYEVNDPERYGVVEFDENGRVLSIEEK 160 (240)
T ss_pred ECCCCCCHHHHHHHHHCCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 62686313788888762898734443874010656899999999666884787777236113672311478857898889
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 33322222202455410002243220046753333333432000001320463135412563278457799999999998
Q gi|254780922|r 161 PNNPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTAVFVRNI 240 (292)
Q Consensus 161 P~~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As~~i~~~ 240 (292)
T Consensus 161 P~~~~s~~~~~GiYi~~~~i~~~i~~~~~~~~ge~~i~d~~~~~i~~g~~~~~~~~~~~~W~DiGtpe~~~~An~~i~~~ 240 (240)
T cd02538 161 PKKPKSNYAVTGLYFYDNDVFEIAKQLKPSARGELEITDVNNEYLEKGKLSVELLGRGFAWLDTGTHESLLEASNFVQTI 240 (240)
T ss_pred CCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHC
T ss_conf 99999887999999989899999985899999907588999999985997399968998089799999999999889649