HHsearch alignment for GI: 254780922 and conserved domain: cd02541
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=100.00 E-value=0 Score=397.72 Aligned_cols=232 Identities=26% Similarity=0.480 Sum_probs=198.3
Q ss_pred EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC------------
Q ss_conf 07992488874553344389822224783747999999999789868999977765643111222222------------
Q gi|254780922|r 2 KGIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGE------------ 69 (292)
Q Consensus 2 kaiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~------------ 69 (292)
T Consensus 2 KAvILAgG~GTRL~PlT~~~PKpLlpi~gkPii~~~i~~l~~~Gi~~iii~~~~~~~~-I~~~f~~~~~~~~~l~~~~k~ 80 (267)
T cd02541 2 KAVIPAAGLGTRFLPATKAIPKEMLPIVDKPVIQYIVEEAVAAGIEDIIIVTGRGKRA-IEDHFDRSYELEETLEKKGKT 80 (267)
T ss_pred EEEEECCCCCCCCCHHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEEECCHHH-HHHHHCCCHHHHHHHHHCCCH
T ss_conf 6999898774667842469984364899998699999999986998899991246666-244506658899998526856
Q ss_pred ---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC--CCCCHHHHHCCCHHHHHCCCCC--
Q ss_conf ---------221111222333322446852101112335675213214432111--1000011100000111001222--
Q gi|254780922|r 70 ---------KWGVQFSYIEQLVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGS--DISDIFHKARARRNSATVVGCH-- 136 (292)
Q Consensus 70 ---------~~g~~i~y~~q~~p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~--~l~~~l~~~~~~~~~~ti~~~~-- 136 (292)
T Consensus 81 ~~~~~~~~~~~~~~i~~~~e~~~lGtggai~~a~~~~~~~~flv~~gD~l~~~~~~~l~~li~~~~~~~~~-~~~~~~v~ 159 (267)
T cd02541 81 DLLEEVRIISDLANIHYVRQKEPLGLGHAVLCAKPFIGDEPFAVLLGDDLIDSKEPCLKQLIEAYEKTGAS-VIAVEEVP 159 (267)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCE-EEEEEEEC
T ss_conf 55555422478955999977898876789872101049986799968988853750668999999730872-68999968
Q ss_pred CCCCCCCCCCCCCCCC----CHHHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCE
Q ss_conf 2100012221222210----0010013333--322222202455410002243220046753333333432000001320
Q gi|254780922|r 137 VQNPQRYGVVEVDSSN----QAISIEEKPN--NPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLL 210 (292)
Q Consensus 137 v~~p~~yGvv~~d~~~----~i~~i~EKP~--~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~ 210 (292)
T Consensus 160 ~~~~~~yGvv~~~~~~~~~~~i~~~~EKP~~~~~~s~l~~~GiYi~~~~i~~~i~~~~~~~~~e~~l~d~i~~li~~~~v 239 (267)
T cd02541 160 PEDVSKYGIVKGEKIDGDVFKVKGLVEKPKPEEAPSNLAIVGRYVLTPDIFDILENTKPGKGGEIQLTDAIAKLLEEEPV 239 (267)
T ss_pred CCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCE
T ss_conf 66787364389667787068888764068876798531663449988999878972899999833077999999857996
Q ss_pred EEEECCCCEEEECCCCHHHHHHHHHHH
Q ss_conf 463135412563278457799999999
Q gi|254780922|r 211 AVEFLREGSAWFDAGTPESLLDTAVFV 237 (292)
Q Consensus 211 ~~~~~~~g~~W~D~Gt~e~l~~As~~i 237 (292)
T Consensus 240 -~~~~~~g-~W~DiGtp~~y~~A~~~~ 264 (267)
T cd02541 240 -YAYVFEG-KRYDCGNKLGYLKATVEF 264 (267)
T ss_pred -EEEEECC-EEEECCCHHHHHHHHHHH
T ss_conf -9998598-889579989999999998