HHsearch alignment for GI: 254780922 and conserved domain: cd04184
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=95.16 E-value=0.033 Score=34.05 Aligned_cols=103 Identities=12% Similarity=0.156 Sum_probs=60.7
Q ss_pred EEEECCE--EHHHHHHHHHHHCCCC--EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2247837--4799999999978986--89999777656431112222222211112223333224468521011123356
Q gi|254780922|r 25 MLPIYNK--PMIYYPVSTLMDAGIR--EILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQLVPAGLAQSYILGAEFIGDS 100 (292)
Q Consensus 25 Llpi~gk--plI~~~l~~l~~~Gi~--~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~~p~Gta~Ai~~a~~~i~~~ 100 (292)
T Consensus 6 iip~yN~~~~~l~~~l~Si~~Qt~~~~EiIvvDd~StD~~~~~~~~~~~~~~~~i~~~~~~~n~G~~~a~N~gi~~a~ge 85 (202)
T cd04184 6 VMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALELATGE 85 (202)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 99748896699999999998378998799999899894789999999885188520012678878999988645136876
Q ss_pred CCCEEECCCCCCCCCCCCHHHHHCCCH
Q ss_conf 752132144321111000011100000
Q gi|254780922|r 101 SSVLILGDNVFYGSDISDIFHKARARR 127 (292)
Q Consensus 101 ~~~lilgDni~~~~~l~~~l~~~~~~~ 127 (292)
T Consensus 86 yi~flD~DD~~~p~~l~~~~~~~~~~~ 112 (202)
T cd04184 86 FVALLDHDDELAPHALYEVVKALNEHP 112 (202)
T ss_pred EEEECCCCCEECHHHHHHHHHHHHHCC
T ss_conf 677327785528439999999998689