HHsearch alignment for GI: 254780922 and conserved domain: cd06915
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=100.00 E-value=0 Score=373.19 Aligned_cols=223 Identities=25% Similarity=0.413 Sum_probs=203.7
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 79924888745533443898222247837479999999997898689999777656431112222222211112223333
Q gi|254780922|r 3 GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDLPVLKEFLGSGEKWGVQFSYIEQLV 82 (292)
Q Consensus 3 aiIlAaG~GtRl~P~T~~~pK~Llpi~gkplI~~~l~~l~~~Gi~~I~ii~~~~~~~~~~~~l~~g~~~g~~i~y~~q~~ 82 (292)
T Consensus 1 AvIlAaG~GtRl~p~T~~~PKpLl~i~gkpli~~~l~~l~~~gi~~iii~~~~~~-~~i~~~~~~~~~~~~~i~~~~e~~ 79 (223)
T cd06915 1 AVILAGGLGTRLRSVVKDLPKPLAPVAGRPFLEYLLEYLARQGISRIVLSVGYLA-EQIEEYFGDGYRGGIRIYYVIEPE 79 (223)
T ss_pred CEEECCCCCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEECCHH-HHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf 9894787886788110799831128999989999999999759977887301023-433443310234577614788642
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
Q ss_conf 22446852101112335675213214432111100001110000011100122221000122212222100010013333
Q gi|254780922|r 83 PAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISDIFHKARARRNSATVVGCHVQNPQRYGVVEVDSSNQAISIEEKPN 162 (292)
Q Consensus 83 p~Gta~Ai~~a~~~i~~~~~~lilgDni~~~~~l~~~l~~~~~~~~~~ti~~~~v~~p~~yGvv~~d~~~~i~~i~EKP~ 162 (292)
T Consensus 80 ~lGt~gal~~a~~~i~~~~flv~~gD~~-~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g~v~~d~~~~i~~~~eK~~ 158 (223)
T cd06915 80 PLGTGGAIKNALPKLPEDQFLVLNGDTY-FDVDLLALLAALRASGADATMALRRVPDASRYGNVTVDGDGRVIAFVEKGP 158 (223)
T ss_pred ECCHHHHHHHHHHHCCCCCEEEECCCEE-ECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCEEEEEECCC
T ss_conf 3646889988886369998899827711-267789999999857997899999899830278589879731423475489
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCEEEECCCCHHHHHHHH
Q ss_conf 322222202455410002243220046753333333432000001320463135412563278457799999
Q gi|254780922|r 163 NPKSSFAVTGIYFYDQEVVNIARNIRPSARGELEITDVNSYYLDKGLLAVEFLREGSAWFDAGTPESLLDTA 234 (292)
Q Consensus 163 ~~~sn~a~~GiY~f~~~i~~~~~~l~~s~rgE~eitD~~~~~l~~~~~~~~~~~~g~~W~D~Gt~e~l~~As 234 (292)
T Consensus 159 ~~~~~~i~~Giyi~~~~i~~~~~~~~~~-----~~~d~~~~li~~~~v-~~~~~~g-~w~DiGt~e~~~~A~ 223 (223)
T cd06915 159 GAAPGLINGGVYLLRKEILAEIPADAFS-----LEADVLPALVKRGRL-YGFEVDG-YFIDIGIPEDYARAQ 223 (223)
T ss_pred CCCCCEEEEEEEEECHHHHHHHHCCCCC-----CHHHHHHHHHHCCCE-EEEEECC-EEEECCCHHHHHHHC
T ss_conf 8766824463899989999741425997-----279999999834997-9999799-199798989999739