RPSBLAST alignment of GI: 254780922 and protein with PDBid: 1vgw

>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A Length = 231

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 15/150 (10%), Positives = 43/150 (28%), Gaps = 8/150 (5%)

Query: 1   MK----GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMD-AGIREILIISTP 55
           +K     ++ A G G R         KQ + I +K ++ + +        +   +++ +P
Sbjct: 3   LKRKNIALIPAAGIGVRFG---ADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSP 59

Query: 56  RDLPVLKEFLGSGEKWGVQFSYIEQLVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGSD 115
            D    K      +    +     +        + +L      ++ ++L+          
Sbjct: 60  EDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPS 119

Query: 116 ISDIFHKARARRNSATVVGCHVQNPQRYGV 145
            +      +A   +   +            
Sbjct: 120 EALARLIEQAGNAAEGGILAVPVADTLKRA 149