RPSBLAST alignment of GI: 254780922 and protein with PDBid: 3oam

>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} Length = 252

 Score = 38.3 bits (88), Expect = 0.002
 Identities = 24/138 (17%), Positives = 38/138 (27%), Gaps = 12/138 (8%)

Query: 1   MK--GIVLAGGSGTRLRPLTDLLSKQMLPIYNKPMIYYPVSTLMDAGIREILIISTPRDL 58
           M    ++ A    TRL P      K +  I  KPMI +     M AG   ++I +    +
Sbjct: 1   MSFTVVIPARYQSTRL-P-----GKPLADIGGKPMIQWVYEQAMQAGADRVIIATDDERV 54

Query: 59  PVLKEFLGSGEKWGVQFSYIEQLVPAGLAQSYILGAEFIGDSSSVLILGDNVFYGSDISD 118
               +  G      V  +              +       D   V + GD       I  
Sbjct: 55  EQAVQAFG----GVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIR 110

Query: 119 IFHKARARRNSATVVGCH 136
                 A  ++       
Sbjct: 111 QVADNLAACSAPMATLAV 128