HHsearch alignment for GI: 254780923 and conserved domain: cd06421
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=97.28 E-value=0.016 Score=35.39 Aligned_cols=197 Identities=14% Similarity=0.136 Sum_probs=104.0
Q ss_pred CCEEEEEEECCH--HHHHHHHHHHHHCCCC---CCEEEEECCCHHHHHHHHHHHCC-C--CE-EEEECCCCCHHHHHHHH
Q ss_conf 755999994367--7799999999818998---31899808631799999985258-8--37-99945667317899975
Q gi|254780923|r 116 AKIAIVVHLYYI--DLWIEIANLLSNLSIS---FDLHVTLVTESASIKSEILKIFP-A--AR-IHIMENHGRDVLPFLIL 186 (365)
Q Consensus 116 ~KIAV~lHlyY~--DLl~Ei~~~L~~ip~~---~DL~ITt~~~~~~~~~~i~~~~~-~--~~-I~vv~NRGRDI~PfLv~ 186 (365)
T Consensus 1 P~VsViIPayNE~~~~i~~~l~sl~~q~YP~~~~eIiVvdD-~std~t~~~~~~~~~~~~~~~~~~~~~~g~Ka~alN~g 79 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDD-GRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLNNA 79 (234)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC-CCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 93999998389978999999999996799998289999989-89878898888845664368887488999769999999
Q ss_pred HCHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-
Q ss_conf 0644526868899965686767777733447899999987559999999999998628964898156654433332344-
Q gi|254780923|r 187 LETEQLSNYDYVCKIHGKKSKRKGYSWWEGDLWRRWLFYDLLGAPGVVFKIIRTFDTHRDIGMIGSRAYRYPNKYCDYT- 265 (365)
Q Consensus 187 ~~~~~l~~YD~v~kiHTKKS~~~~~h~~~G~~WR~~Ll~~LLGs~~~V~~Il~~F~~np~lGlv~P~~~~~~~~~~~~~- 265 (365)
T Consensus 80 ~~---~a~gd~v~~~DaD---------------------~~~-~~~~L~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~ 134 (234)
T cd06421 80 LA---HTTGDFVAILDAD---------------------HVP-TPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLA 134 (234)
T ss_pred HH---HCCCCEEEEECCC---------------------CCC-CHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCHHH
T ss_conf 99---7789999998898---------------------770-8769999999998699758995356773488332899
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 54102289999999984899873326637701477329888878718997121865558888739999999999998873
Q gi|254780923|r 266 CSLGKNREMICTLAGRMGITFQDQKLDFFAGTMFWVRTEALDPIKNLRLSRYFEPKVHKALDGEIEHAVERCFSLSVKKA 345 (365)
Q Consensus 266 ~~wg~N~~~~~~L~~rlgi~~~~~~~~FpaGSMFW~Rp~AL~pL~dl~l~~~dFpeE~g~~DGTLaHAIERl~~~iv~~a 345 (365)
T Consensus 135 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~G~~~~~rr~~l~~vGg-------f~~~------~~~--ED~dl~~rl~~~ 196 (234)
T cd06421 135 DGAPNEQELFYGVIQPG-R--DRWGAAFCCGSGAVVRREALDEIGG-------FPTD------SVT--EDLATSLRLHAK 196 (234)
T ss_pred HHHHHHHHHHHHHHHHH-H--HCCCCEEECCCHHHHHHHHHHHCCC-------CCCC------CCC--HHHHHHHHHHHC
T ss_conf 99999999999999988-7--3388425535506788999998189-------9999------976--599999999976
Q ss_pred CCEEEEEHHHH
Q ss_conf 98788726642
Q gi|254780923|r 346 NFRISDVDCIL 356 (365)
Q Consensus 346 Gyri~~v~~~~ 356 (365)
T Consensus 197 G~k~~y~p~a~ 207 (234)
T cd06421 197 GWRSVYVPEPL 207 (234)
T ss_pred CCEEEEECCCE
T ss_conf 99799936867