HHsearch alignment for GI: 254780924 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=95.95 E-value=0.027 Score=32.67 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=78.1
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CCEEEECCCHHHHHHHHHCCCCEE-ECCCCCHHHHHHCCHHHCCEEEEECCCHHH
Q ss_conf 781799737748999999998479-908997199899999997699299-978999899984893146799993599689
Q gi|254780924|r 448 CDHVILVGYGRIGKVIVQNLKAAG-IALLVIEDSEKKIEELRSLGIDVI-YGNATITKILLMANIEKARSLVVSISTAFE 525 (609)
Q Consensus 448 ~~~vii~G~g~~g~~~~~~L~~~~-~~v~vid~~~~~~~~~~~~g~~~~-~gd~~~~~~l~~~~i~~a~~vi~~~~~~~~ 525 (609)
T Consensus 126 ~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~--~~dliINaTp~Gm~ 203 (283)
T COG0169 126 GKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE--EADLLINATPVGMA 203 (283)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCEEEECCCCCCC
T ss_conf 8889998976899999999998699879999588899999999864505631102455412355--45789978878777
Q ss_pred HH---HHHHHHHHHCCCCEEEEEE----CCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH
Q ss_conf 99---9999999958988089994----698999999976998787658999999999987
Q gi|254780924|r 526 AA---YITQEARNSNPSILIIALA----DSDSEVEHLTRYGADTVVMSAREIALGMLDRLN 579 (609)
Q Consensus 526 n~---~~~~~~~~~~~~~~iia~~----~~~~~~~~l~~~Ga~~vi~p~~~~a~~~~~~l~ 579 (609)
T Consensus 204 ~~~~~~~~~--~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~-~idGl~Mlv~Qaa~aF~ 261 (283)
T COG0169 204 GPEGDSPVP--AELLPKGAIVYDVVYNPLETPLLREARAQGAK-TIDGLGMLVHQAAEAFE 261 (283)
T ss_pred CCCCCCCCC--HHHCCCCCEEEEECCCCCCCHHHHHHHHCCCC-EECCHHHHHHHHHHHHH
T ss_conf 887888886--77668677899811188788899999985990-78739999999999999