HHsearch alignment for GI: 254780924 and conserved domain: COG2855

>COG2855 Predicted membrane protein [Function unknown].
Probab=98.25  E-value=0.00042  Score=45.08  Aligned_cols=117  Identities=21%  Similarity=0.305  Sum_probs=83.0

Q ss_pred             HHHHHHHH--HHHCCCCHHHHHHHHHHHHCCHHCCCCCCHH----HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHH
Q ss_conf             99999999--9870888679999999962741038558478----99999999999999882541688999841515889
Q gi|254780924|r   10 LAFIFGAI--ANRCRLPTLIGYLVAGILVGPRTPGFVASQS----LVPALAEIGIILLMFGVGLHFSVKDLISVRGIALP   83 (609)
Q Consensus        10 ~a~i~g~l--a~rl~lP~i~~~il~GillGp~~l~~i~~~~----~l~~l~~lgl~~llF~~Gleld~~~l~~~~~~~~~   83 (609)
T Consensus        22 ~a~~l~~~~~~~~~~l~al~lAIllGi~l~~l~~~~~~~~~GI~fs~k~LLr~gIvLl----G~~ltl~~i~~~G~~~v~   97 (334)
T COG2855          22 LAMLLGAFFFSIHLGLSALTLAILLGILLGILPQIPAQTSAGITFSSKKLLRLGIVLL----GFRLTLSDIADVGGSGVL   97 (334)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHH----CCEEEHHHHHHCCCCHHH
T ss_conf             9999853477752585178999999999850023403525620013887999999998----360139999872711799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH---HHHHHH
Q ss_conf             98999999999999999996788689999999997423899---998765
Q gi|254780924|r   84 GALIQIILGTALGALMGMVMGWSLGGSVVFGLALSIASTVV---LLKALQ  130 (609)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~lg~~~~~all~g~~l~~ts~~v---v~~~l~  130 (609)
T Consensus        98 ~~~~~l~~t~~~~~~lg~~lgld~~~a~Lia~GssICGasAiaA~~pvik  147 (334)
T COG2855          98 IIAITLSSTFLFAYFLGKLLGLDKKLALLIAAGSSICGASAIAATAPVIK  147 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
T ss_conf             99999999999999999995998878999980211547999998387678