HHsearch alignment for GI: 254780924 and conserved domain: PRK00536
>PRK00536 speE spermidine synthase; Provisional.
Probab=95.25 E-value=0.17 Score=27.20 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=64.0
Q ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHH-----HHHHCCHHHCCEEEEECCC
Q ss_conf 78179973774899999999847990899719989999999769929997899989-----9984893146799993599
Q gi|254780924|r 448 CDHVILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATITK-----ILLMANIEKARSLVVSIST 522 (609)
Q Consensus 448 ~~~vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~-----~l~~~~i~~a~~vi~~~~~ 522 (609)
T Consensus 73 Pk~VLIIGGGDGG--~~REvlKH~~~v~~VEID~~Vv~~sk~y-lP~~~~~~~dpr~~~~~~~~~~~~~~fDvIIvDsl~ 149 (262)
T PRK00536 73 LKEVLIVDGFDLE--LAHQLFKYDTHVDFVQADEKILDSFISF-FPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQEP 149 (262)
T ss_pred CCEEEEECCCCHH--HHHHHHCCCCEEEEEEECHHHHHHHHHH-CHHHHHHHCCCCEEHHHHHHHHCCCCCCEEEECCCC
T ss_conf 7879998687559--9999872897669999678999999997-856565413996113999876154766889988999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 6899999999999589880899946989
Q gi|254780924|r 523 AFEAAYITQEARNSNPSILIIALADSDS 550 (609)
Q Consensus 523 ~~~n~~~~~~~~~~~~~~~iia~~~~~~ 550 (609)
T Consensus 150 ~~~~~~~l--~~~L~~~Gi~v~Q~esp~ 175 (262)
T PRK00536 150 DIHKIDGL--KRMLKEDGVFISVAKHPL 175 (262)
T ss_pred CCCHHHHH--HHHHCCCCEEEECCCCHH
T ss_conf 80549999--998589989998389712