HHsearch alignment for GI: 254780924 and conserved domain: PRK05274
>PRK05274 2-keto-3-deoxygluconate permease; Provisional.
Probab=97.93 E-value=0.00031 Score=46.00 Aligned_cols=243 Identities=14% Similarity=0.193 Sum_probs=117.1
Q ss_pred HHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--H-HH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999988254168899984151588998999999999999999996788--6-89-999999997423899998765655
Q gi|254780924|r 58 IILLMFGVGLHFSVKDLISVRGIALPGALIQIILGTALGALMGMVMGWS--L-GG-SVVFGLALSIASTVVLLKALQENR 133 (609)
Q Consensus 58 l~~llF~~Gleld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~--~-~~-all~g~~l~~ts~~vv~~~l~~~~ 133 (609)
T Consensus 54 i~~~l~~~Ga~I~~k~~~~~l~kg~~l~~~K~~i~~~lg~~~~~~~g~~g~flGls~Laiiaa~~~sNggLY~aL~g~yG 133 (305)
T PRK05274 54 LAVFLFCMGASINLRAAGVVLKKGGTLLATKIAVAALLGLIAGKLLGEEGGFAGLSTLAVVAAMDNTNGGLYAALMGQYG 133 (305)
T ss_pred HHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf 99999992786450014266775144667999999999999999808777642636999999986675899999999819
Q ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 41144057898998777789999999999861344433013567899998876532101479999999841010000100
Q gi|254780924|r 134 ILETDRGKIAVGWLIVEDLIIVLALVLIPAAATNYSAEPSSMTHPWTSFITQQMGFEVGMPGLIMITLLKVVAFIGVMLI 213 (609)
Q Consensus 134 ~~~~~~g~~~~~~~~~~Di~~i~~l~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (609)
T Consensus 134 ~~~--------------D~GA~~i~sl~---------------------------------------------------- 147 (305)
T PRK05274 134 DAE--------------DAGAIVLMSLE---------------------------------------------------- 147 (305)
T ss_pred CHH--------------HHHHHHHHHHC----------------------------------------------------
T ss_conf 975--------------50365223443----------------------------------------------------
Q ss_pred ECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 034454387764203567368999999999999998887--411002466666422202761456899999766899999
Q gi|254780924|r 214 FGRRVIPWILHMIFYTGSRELFRLGVLAIALGFAYGSSK--LFGVSLSLGAFFAGMILAESELSQSAAQESLPLRDAFSV 291 (609)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~g~s~~lgaf~aG~~l~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
T Consensus 148 -----------------~GPf~Tmv~L----G~s-Gla~ip~~~lv~~iiPi~iG~ilGNLD~--~~r~fl~~~~~~~Ip 203 (305)
T PRK05274 148 -----------------DGPFFTMVIL----GAA-GLASFPFMALVGAVLPILVGFILGNLDP--ELREFLGKAVQVLIP 203 (305)
T ss_pred -----------------CCHHHHHHHH----HCC-CCCCCCHHHHHHHHHHHHHHHHHHCCCH--HHHHHHCCCCCEEEE
T ss_conf -----------------5718999998----516-5778988999999999999997626888--999986357761531
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHH-HHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 99988653114798862025677776555422122321100025-587999999864-3212202567889887641787
Q gi|254780924|r 292 LFFISVGMMFNPDILISNPILLMMAVIIVIIGKALIAFIVVIAF-GRSVATALTIAA-SLSQIGEFSFILANLGVELGIL 369 (609)
Q Consensus 292 ~fFv~iG~~l~~~~l~~~~~~~l~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~g~-~l~~~g~~~~v~a~~a~~~g~i 369 (609)
T Consensus 204 ff~FalG~~inl~~i~~aGl~GilLg~~~~~~tg~~~~~~~r~l~~~~g~aG~A~~ttAGnAvatPa~v-A~~dp~~~~~ 282 (305)
T PRK05274 204 FFAFALGAGIDLEVIVQAGLSGILLGLAVIAVTGIPLYLADKLIGGGNGTAGAAASSTAGNAVATPAAI-AAADPTFAPV 282 (305)
T ss_pred HHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH-HHHCCHHHHH
T ss_conf 103430378869999871631389999999998289999999970799831025876777877538999-8639215556
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8668778778889999999999
Q gi|254780924|r 370 PDQARDLILASSIISIILNPLV 391 (609)
Q Consensus 370 ~~~~~~~i~~~~~~s~~itp~l 391 (609)
T Consensus 283 a~~ATaqvAaavivTaiL~P~l 304 (305)
T PRK05274 283 APAATAQVAAAVIVTAILVPIL 304 (305)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8989999999999999861455