HHsearch alignment for GI: 254780924 and conserved domain: PRK09468

>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=96.35  E-value=0.034  Score=31.94  Aligned_cols=99  Identities=19%  Similarity=0.215  Sum_probs=68.5

Q ss_pred             HCCCCEEEECCCHHHHHHHH----HCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCC-HHHHHHHHHHHHHHCCCCEEE
Q ss_conf             47990899719989999999----7699299978999899984893146799993599-689999999999958988089
Q gi|254780924|r  469 AAGIALLVIEDSEKKIEELR----SLGIDVIYGNATITKILLMANIEKARSLVVSIST-AFEAAYITQEARNSNPSILII  543 (609)
Q Consensus       469 ~~~~~v~vid~~~~~~~~~~----~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~-~~~n~~~~~~~~~~~~~~~ii  543 (609)
T Consensus         3 ~~~~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~-~~~~a~~~~~~~~~DlvilDi~lp~~dG~~l~~~iR~~~~~~pII   81 (239)
T PRK09468          3 QENYKILVVDDDMRLRALLERYLTEQGFQVRSAA-NAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQNNPTPII   81 (239)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEE
T ss_conf             9897899990999999999999998899999989-999999999758998999878998888734677787505787789


Q ss_pred             EEECCHHHHHH--HHHCCCCEEECHHH
Q ss_conf             99469899999--99769987876589
Q gi|254780924|r  544 ALADSDSEVEH--LTRYGADTVVMSAR  568 (609)
Q Consensus       544 a~~~~~~~~~~--l~~~Ga~~vi~p~~  568 (609)
T Consensus        82 ~LTa~~~~~d~i~~l~~GADDYi~KPf  108 (239)
T PRK09468         82 MLTAKGEEVDRIVGLEMGADDYLPKPF  108 (239)
T ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCC
T ss_conf             994667878999999769868855899