HHsearch alignment for GI: 254780924 and conserved domain: PRK09468
>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=96.35 E-value=0.034 Score=31.94 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=68.5
Q ss_pred HCCCCEEEECCCHHHHHHHH----HCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCC-HHHHHHHHHHHHHHCCCCEEE
Q ss_conf 47990899719989999999----7699299978999899984893146799993599-689999999999958988089
Q gi|254780924|r 469 AAGIALLVIEDSEKKIEELR----SLGIDVIYGNATITKILLMANIEKARSLVVSIST-AFEAAYITQEARNSNPSILII 543 (609)
Q Consensus 469 ~~~~~v~vid~~~~~~~~~~----~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~-~~~n~~~~~~~~~~~~~~~ii 543 (609)
T Consensus 3 ~~~~kILiVEDd~~~~~~l~~~L~~~g~~v~~a~-~~~~a~~~~~~~~~DlvilDi~lp~~dG~~l~~~iR~~~~~~pII 81 (239)
T PRK09468 3 QENYKILVVDDDMRLRALLERYLTEQGFQVRSAA-NAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQNNPTPII 81 (239)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCEE
T ss_conf 9897899990999999999999998899999989-999999999758998999878998888734677787505787789
Q ss_pred EEECCHHHHHH--HHHCCCCEEECHHH
Q ss_conf 99469899999--99769987876589
Q gi|254780924|r 544 ALADSDSEVEH--LTRYGADTVVMSAR 568 (609)
Q Consensus 544 a~~~~~~~~~~--l~~~Ga~~vi~p~~ 568 (609)
T Consensus 82 ~LTa~~~~~d~i~~l~~GADDYi~KPf 108 (239)
T PRK09468 82 MLTAKGEEVDRIVGLEMGADDYLPKPF 108 (239)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCC
T ss_conf 994667878999999769868855899