HHsearch alignment for GI: 254780924 and conserved domain: PRK10710
>PRK10710 DNA-binding transcriptional regulator BaeR; Provisional.
Probab=95.02 E-value=0.14 Score=27.74 Aligned_cols=99 Identities=15% Similarity=0.173 Sum_probs=56.4
Q ss_pred HHCCCCEEEECCCHHHHHH----HHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCH-HHHHHHHHHHHHHCCCCEE
Q ss_conf 8479908997199899999----9976992999789998999848931467999935996-8999999999995898808
Q gi|254780924|r 468 KAAGIALLVIEDSEKKIEE----LRSLGIDVIYGNATITKILLMANIEKARSLVVSISTA-FEAAYITQEARNSNPSILI 542 (609)
Q Consensus 468 ~~~~~~v~vid~~~~~~~~----~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~~i 542 (609)
T Consensus 7 ~~~~~kILlVEDd~~l~~~l~~~L~~~g~~V~~a-~~~~eal~~~~~~~~DliilDi~lp~~~Gl~l~~~lr~~~-~~pi 84 (240)
T PRK10710 7 DENTPRILIVEDEPKLGQLLIDYLRAASYAPTLI-SHGDEVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFS-DIPI 84 (240)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCC-CCCE
T ss_conf 9998879999298999999999999889999998-9999999999737998999879998887763211221157-6468
Q ss_pred EEEECCHHHHHH--HHHCCCCEEECHHH
Q ss_conf 999469899999--99769987876589
Q gi|254780924|r 543 IALADSDSEVEH--LTRYGADTVVMSAR 568 (609)
Q Consensus 543 ia~~~~~~~~~~--l~~~Ga~~vi~p~~ 568 (609)
T Consensus 85 I~lta~~~~~~~~~al~~GAddYl~KPf 112 (240)
T PRK10710 85 VMVTAKIEEIDRLLGLEIGADDYICKPY 112 (240)
T ss_pred EEECCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 9981678889999999869987600776