HHsearch alignment for GI: 254780924 and conserved domain: PRK10816

>PRK10816 DNA-binding transcriptional regulator PhoP; Provisional.
Probab=94.41  E-value=0.21  Score=26.54  Aligned_cols=95  Identities=19%  Similarity=0.180  Sum_probs=58.7

Q ss_pred             CEEEECCCHHHHH----HHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCH-HHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             0899719989999----99976992999789998999848931467999935996-899999999999589880899946
Q gi|254780924|r  473 ALLVIEDSEKKIE----ELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTA-FEAAYITQEARNSNPSILIIALAD  547 (609)
Q Consensus       473 ~v~vid~~~~~~~----~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~~iia~~~  547 (609)
T Consensus         2 kILivEdd~~~~~~l~~~L~~~g~~V~~a~-~~~~al~~~~~~~~dlvilD~~lp~~~G~~l~~~ir~~~~~~piI~lta   80 (223)
T PRK10816          2 RVLVVEDNALLRHHLKVQLQDAGHQVDAAE-DAKEADYYLNEHLPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTA   80 (223)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCCEEEEEC
T ss_conf             899995989999999999997899999989-9999999997579989999799989886400120110489876899944


Q ss_pred             CHHHH--HHHHHCCCCEEECHHH
Q ss_conf             98999--9999769987876589
Q gi|254780924|r  548 SDSEV--EHLTRYGADTVVMSAR  568 (609)
Q Consensus       548 ~~~~~--~~l~~~Ga~~vi~p~~  568 (609)
T Consensus        81 ~~~~~~~~~al~~Gaddyl~KP~  103 (223)
T PRK10816         81 RESWQDKVEVLSAGADDYVTKPF  103 (223)
T ss_pred             CCCHHHHHHHHHCCCCEEECCCC
T ss_conf             45677899999869988641897