HHsearch alignment for GI: 254780924 and conserved domain: PRK11154

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=95.37  E-value=0.17  Score=27.11  Aligned_cols=98  Identities=13%  Similarity=0.123  Sum_probs=61.4

Q ss_pred             CCCEEEECCCHHHHHHHHH-HHHCCCCEEEECCCHHHHHHHHHCC-----CCEEECCCCCHHH---HH-------HCCHH
Q ss_conf             7817997377489999999-9847990899719989999999769-----9299978999899---98-------48931
Q gi|254780924|r  448 CDHVILVGYGRIGKVIVQN-LKAAGIALLVIEDSEKKIEELRSLG-----IDVIYGNATITKI---LL-------MANIE  511 (609)
Q Consensus       448 ~~~vii~G~g~~g~~~~~~-L~~~~~~v~vid~~~~~~~~~~~~g-----~~~~~gd~~~~~~---l~-------~~~i~  511 (609)
T Consensus       309 i~kv~ViGaG~MG~gIA~~~a~~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~v~~g~~~~~~~~~~l~~i~~~~~~~~~~  388 (706)
T PRK11154        309 VNKVGVLGGGLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHMTPAERDKQMALISGTTDYRGFK  388 (706)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCHHHHC
T ss_conf             76799986473238999999998698799997999999999998899999998618999899999862241004412315


Q ss_pred             HCCEEEEECCCH-HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             467999935996-8999999999995898808999
Q gi|254780924|r  512 KARSLVVSISTA-FEAAYITQEARNSNPSILIIAL  545 (609)
Q Consensus       512 ~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~~iia~  545 (609)
T Consensus       389 ~~DlVIEAv~E~~~~K~~v~~~le~~~~~~aIlAt  423 (706)
T PRK11154        389 HADLVIEAVFEDLALKQQMVADVEQNCAEHTIFAS  423 (706)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             68879997145288899999999964798858950