HHsearch alignment for GI: 254780924 and conserved domain: PRK11154
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=95.37 E-value=0.17 Score=27.11 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=61.4
Q ss_pred CCCEEEECCCHHHHHHHHH-HHHCCCCEEEECCCHHHHHHHHHCC-----CCEEECCCCCHHH---HH-------HCCHH
Q ss_conf 7817997377489999999-9847990899719989999999769-----9299978999899---98-------48931
Q gi|254780924|r 448 CDHVILVGYGRIGKVIVQN-LKAAGIALLVIEDSEKKIEELRSLG-----IDVIYGNATITKI---LL-------MANIE 511 (609)
Q Consensus 448 ~~~vii~G~g~~g~~~~~~-L~~~~~~v~vid~~~~~~~~~~~~g-----~~~~~gd~~~~~~---l~-------~~~i~ 511 (609)
T Consensus 309 i~kv~ViGaG~MG~gIA~~~a~~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~v~~g~~~~~~~~~~l~~i~~~~~~~~~~ 388 (706)
T PRK11154 309 VNKVGVLGGGLMGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHMTPAERDKQMALISGTTDYRGFK 388 (706)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEECCHHHHC
T ss_conf 76799986473238999999998698799997999999999998899999998618999899999862241004412315
Q ss_pred HCCEEEEECCCH-HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 467999935996-8999999999995898808999
Q gi|254780924|r 512 KARSLVVSISTA-FEAAYITQEARNSNPSILIIAL 545 (609)
Q Consensus 512 ~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~~iia~ 545 (609)
T Consensus 389 ~~DlVIEAv~E~~~~K~~v~~~le~~~~~~aIlAt 423 (706)
T PRK11154 389 HADLVIEAVFEDLALKQQMVADVEQNCAEHTIFAS 423 (706)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 68879997145288899999999964798858950