HHsearch alignment for GI: 254780924 and conserved domain: PRK12815
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed.
Probab=97.28 E-value=0.0015 Score=41.20 Aligned_cols=170 Identities=15% Similarity=0.189 Sum_probs=108.9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHH--H---------HHHHHHHHHCCCCEEEE
Q ss_conf 210000001112221000012223333211122232134781799737748--9---------99999998479908997
Q gi|254780924|r 409 VTSSTEQYSHICVEQDTKQEVPVESILEQQEVTIQKTDLCDHVILVGYGRI--G---------KVIVQNLKAAGIALLVI 477 (609)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vii~G~g~~--g---------~~~~~~L~~~~~~v~vi 477 (609)
T Consensus 517 i~P~yK~VDTcA~EF~a~T~Y~YsTY~~e~--e~~~~~~~~kvliLGsGP~RIGqgiEFDYc~vha~~aLr~~G~etImi 594 (1068)
T PRK12815 517 IRPSFKMVDTCAAEFEAKTPYYYSTYFGES--EAKIPSEKKKVLILGSGPIRIGQGIEFDYMCVHAAFALKKEGYETIMI 594 (1068)
T ss_pred CCEEEEECCCCCCCCCCCCCEEEEECCCCC--CCCCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 955898427745554678763776347867--776888983499956787142244240025899999999689748996
Q ss_pred CCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHCC-----CCEEEEEECCHHHH
Q ss_conf 1998999999976992999789998999848931467999935996899999999999589-----88089994698999
Q gi|254780924|r 478 EDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTAFEAAYITQEARNSNP-----SILIIALADSDSEV 552 (609)
Q Consensus 478 d~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~~~n~~~~~~~~~~~~-----~~~iia~~~~~~~~ 552 (609)
T Consensus 595 N~NPETVSTDyD~sDrLYFEPlt~E~V~~I~~~E~p~gVivqfGGQt~lnla-~~L~~~gv~IlGts~~~Id~aEdR~~F 673 (1068)
T PRK12815 595 NNNPETVSTDYDTADRLYFEPITLEDILNVAEAENIKGVIVQFGGQTAINLA-KPLEEAGLPILGTSPDTIDRLEDRDRF 673 (1068)
T ss_pred CCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHH-HHHHHCCCEEECCCHHHHHHHHHHHHH
T ss_conf 2784312367455773575368799999999985899799964882367999-999976994982786886424139999
Q ss_pred H-HHHHCCCCE---EECHHHHHHHHHHHHHHHH
Q ss_conf 9-999769987---8765899999999998742
Q gi|254780924|r 553 E-HLTRYGADT---VVMSAREIALGMLDRLNQV 581 (609)
Q Consensus 553 ~-~l~~~Ga~~---vi~p~~~~a~~~~~~l~~~ 581 (609)
T Consensus 674 ~~ll~~l~i~~p~~~~~~~~~ea~~~a~~iGyP 706 (1068)
T PRK12815 674 YQLLDELGLPHVPGLTATSEEEALAFAKRIGYP 706 (1068)
T ss_pred HHHHHHCCCCCCCCCEECCHHHHHHHHHHCCCC
T ss_conf 999997389999963545667999999864997