HHsearch alignment for GI: 254780924 and conserved domain: TIGR01179
>TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5.1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process.
Probab=96.01 E-value=0.011 Score=35.27 Aligned_cols=127 Identities=12% Similarity=0.183 Sum_probs=86.2
Q ss_pred EECCCHHHHHHHHHHHHCCCCEEEECC----CHHHHHHHHH---CCCCEEECCCCCHHHHHHC-C----HHHCCEEEE--
Q ss_conf 973774899999999847990899719----9899999997---6992999789998999848-9----314679999--
Q gi|254780924|r 453 LVGYGRIGKVIVQNLKAAGIALLVIED----SEKKIEELRS---LGIDVIYGNATITKILLMA-N----IEKARSLVV-- 518 (609)
Q Consensus 453 i~G~g~~g~~~~~~L~~~~~~v~vid~----~~~~~~~~~~---~g~~~~~gd~~~~~~l~~~-~----i~~a~~vi~-- 518 (609)
T Consensus 5 TGGAGYIGSHt~~~Ll~~G~ev~vlDNLs~G~~~~l~~~~~~~G~~~~fv~gDL~D~~~l~~~f~kqql~~~idAViHFA 84 (341)
T TIGR01179 5 TGGAGYIGSHTVRQLLESGYEVVVLDNLSNGSAEALKRGEEITGKEVTFVEGDLRDRELLRRVFEKQQLEHKIDAVIHFA 84 (341)
T ss_pred EECCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 61466443588788763597289981578884887500234148532058717515799999987743116754675201
Q ss_pred EC---------------CCHHHHHHHHHHHHHHCCCCEEEEEE----CCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHH
Q ss_conf 35---------------99689999999999958988089994----698999999976998787658999999999987
Q gi|254780924|r 519 SI---------------STAFEAAYITQEARNSNPSILIIALA----DSDSEVEHLTRYGADTVVMSAREIALGMLDRLN 579 (609)
Q Consensus 519 ~~---------------~~~~~n~~~~~~~~~~~~~~~iia~~----~~~~~~~~l~~~Ga~~vi~p~~~~a~~~~~~l~ 579 (609)
T Consensus 85 g~~~VgESv~~Pl~YY~NNv~nTl~L~~~m~~~GV~~~iFSSsAaVYG~p~~~Pi~E~~pl~~PinPYG-~sKlM~E~iL 163 (341)
T TIGR01179 85 GLIAVGESVQKPLKYYRNNVVNTLNLLEAMQETGVKKFIFSSSAAVYGEPESIPISEDSPLGDPINPYG-RSKLMVERIL 163 (341)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHH
T ss_conf 121252557524544000468999999999981897415304214507788555022256778748665-5668899999
Q ss_pred H
Q ss_conf 4
Q gi|254780924|r 580 Q 580 (609)
Q Consensus 580 ~ 580 (609)
T Consensus 164 ~ 164 (341)
T TIGR01179 164 R 164 (341)
T ss_pred H
T ss_conf 9