HHsearch alignment for GI: 254780924 and conserved domain: TIGR01625
>TIGR01625 YidE_YbjL_dupl YidE/YbjL duplication; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of E. coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport. .
Probab=96.90 E-value=0.023 Score=33.09 Aligned_cols=116 Identities=23% Similarity=0.256 Sum_probs=75.2
Q ss_pred CCCCHHHHHHHHHHHHCCHH----CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHC--CHHHHHHHHHHHH
Q ss_conf 08886799999999627410----38558478999999999999998825416889---998415--1588998999999
Q gi|254780924|r 21 CRLPTLIGYLVAGILVGPRT----PGFVASQSLVPALAEIGIILLMFGVGLHFSVK---DLISVR--GIALPGALIQIIL 91 (609)
Q Consensus 21 l~lP~i~~~il~GillGp~~----l~~i~~~~~l~~l~~lgl~~llF~~Gleld~~---~l~~~~--~~~~~~~~~~~~~ 91 (609)
T Consensus 20 ~~LG~agGvL~~GlllG~~~~~g~~~~~~~~~an~~~~~lGl~LF~~~vGl~aGpgFf~sl~~~g~L~~~~~~~l~~~~~ 99 (165)
T TIGR01625 20 IKLGNAGGVLIVGLLLGAIGATGKLTWYIPFSANLLIRELGLVLFLAGVGLSAGPGFFSSLKDGGSLLRINAGALITVVP 99 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 67888899999999998752259757770868999999986987776776421665575413757999999999999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999678868999999999-742389999876565541144
Q gi|254780924|r 92 GTALGALMGMVMGWSLGGSVVFGLAL-SIASTVVLLKALQENRILETD 138 (609)
Q Consensus 92 ~~~~~~~~~~~lg~~~~~all~g~~l-~~ts~~vv~~~l~~~~~~~~~ 138 (609)
T Consensus 100 ~~~~~~~~~~ll~~~~~~--~~G~~aGa~TntpaL~~~~~~l~~~~~~ 145 (165)
T TIGR01625 100 TLLVAVLLIKLLRIDYAL--TAGMLAGATTNTPALAAANDTLRSLIAD 145 (165)
T ss_pred HHHHHHHHHHHHCCCHHH--HHHHHHHHCCCHHHHHHHHHHHHHCCCC
T ss_conf 999999999996368667--8999821134888999998644301797