HHsearch alignment for GI: 254780924 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.07 E-value=0.017 Score=33.96 Aligned_cols=95 Identities=16% Similarity=0.287 Sum_probs=59.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCC--CEEEECCCHHHHHHHHHC--------CCCEEECCCCCHHHHHHCCHHHCCEEEEEC
Q ss_conf 7997377489999999984799--089971998999999976--------992999789998999848931467999935
Q gi|254780924|r 451 VILVGYGRIGKVIVQNLKAAGI--ALLVIEDSEKKIEELRSL--------GIDVIYGNATITKILLMANIEKARSLVVSI 520 (609)
Q Consensus 451 vii~G~g~~g~~~~~~L~~~~~--~v~vid~~~~~~~~~~~~--------g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~ 520 (609)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~~~~~~----~~~--~~daDvvVita 74 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD----YAD--AADADIVVITA 74 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEECCCC----HHH--HCCCCEEEECC
T ss_conf 989896889999999998679988799981899811568888772563468853982798----899--67999999878
Q ss_pred CC---------H--HHHH----HHHHHHHHHCCCCEEEEEECCHHHH
Q ss_conf 99---------6--8999----9999999958988089994698999
Q gi|254780924|r 521 ST---------A--FEAA----YITQEARNSNPSILIIALADSDSEV 552 (609)
Q Consensus 521 ~~---------~--~~n~----~~~~~~~~~~~~~~iia~~~~~~~~ 552 (609)
T Consensus 75 G~~rkpg~tR~dll~~Na~I~k~i~~~i~~~~p~~iv-ivvtNPvDv 120 (300)
T cd00300 75 GAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAII-LVVSNPVDI 120 (300)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE-EECCCCHHH
T ss_conf 9899979988999998889999999999841997189-985796699