HHsearch alignment for GI: 254780924 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.58 E-value=0.05 Score=30.78 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=64.7
Q ss_pred CCEEEEC-CCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHC-----CCCEEECCCCCHHHHHHCCHHHCCEEEEECCC
Q ss_conf 8179973-77489999999984799089971998999999976-----99299978999899984893146799993599
Q gi|254780924|r 449 DHVILVG-YGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSL-----GIDVIYGNATITKILLMANIEKARSLVVSIST 522 (609)
Q Consensus 449 ~~vii~G-~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~ 522 (609)
T Consensus 29 ~~~~V~G~tG~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~~~~~~~~~~~~~-~~~~l~~adiV~~a~aA 107 (194)
T cd01078 29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAA-RAAAIKGADVVFAAGAA 107 (194)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH-HHHHHCCCCEEEECCHH
T ss_conf 88999858857899999999983997999958788899999999997098731135788778-99774669899964277
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCH
Q ss_conf 689999999999958988089994698
Q gi|254780924|r 523 AFEAAYITQEARNSNPSILIIALADSD 549 (609)
Q Consensus 523 ~~~n~~~~~~~~~~~~~~~iia~~~~~ 549 (609)
T Consensus 108 Gv~~~--~~~~-~~~k~l~Vv~DVNAv 131 (194)
T cd01078 108 GVELL--EKLA-WAPKPLAVAADVNAV 131 (194)
T ss_pred HHHHH--HHHH-HCCCCCEEEEECCCC
T ss_conf 78887--8888-508886599865899