HHsearch alignment for GI: 254780924 and conserved domain: cd05313

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.69  E-value=0.26  Score=25.84  Aligned_cols=106  Identities=15%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             CCEEEECCCHHHHHHHHHHHHCCCCEEEECC-----------CHHHHHHHH---HCCCCEE------ECC---CCCHHHH
Q ss_conf             8179973774899999999847990899719-----------989999999---7699299------978---9998999
Q gi|254780924|r  449 DHVILVGYGRIGKVIVQNLKAAGIALLVIED-----------SEKKIEELR---SLGIDVI------YGN---ATITKIL  505 (609)
Q Consensus       449 ~~vii~G~g~~g~~~~~~L~~~~~~v~vid~-----------~~~~~~~~~---~~g~~~~------~gd---~~~~~~l  505 (609)
T Consensus        39 ~~vaIQGfGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (254)
T cd05313          39 KRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYFEGKKPW  118 (254)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCCHH
T ss_conf             99999897799999999999779979999857850887999988999999999974687102444138985663897513


Q ss_pred             HHCCHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEC----CHHHHHHHHHCCC
Q ss_conf             848931467999935996899999999999589880899946----9899999997699
Q gi|254780924|r  506 LMANIEKARSLVVSISTAFEAAYITQEARNSNPSILIIALAD----SDSEVEHLTRYGA  560 (609)
Q Consensus       506 ~~~~i~~a~~vi~~~~~~~~n~~~~~~~~~~~~~~~iia~~~----~~~~~~~l~~~Ga  560 (609)
T Consensus       119 ----~~~cDIliPaA~en~I~~~nA~~i~a~--~ck~IvEgANgP~T~eAd~iL~~kGI  171 (254)
T cd05313         119 ----EVPCDIAFPCATQNEVDAEDAKLLVKN--GCKYVAEGANMPCTAEAIEVFRQAGV  171 (254)
T ss_pred             ----HCCCCEEEECCCCCCCCHHHHHHHHHC--CCEEEEECCCCCCCHHHHHHHHHCCC
T ss_conf             ----304769974354667899999999967--98299865889998789999998898