HHsearch alignment for GI: 254780924 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.69 E-value=0.26 Score=25.84 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=65.6
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEECC-----------CHHHHHHHH---HCCCCEE------ECC---CCCHHHH
Q ss_conf 8179973774899999999847990899719-----------989999999---7699299------978---9998999
Q gi|254780924|r 449 DHVILVGYGRIGKVIVQNLKAAGIALLVIED-----------SEKKIEELR---SLGIDVI------YGN---ATITKIL 505 (609)
Q Consensus 449 ~~vii~G~g~~g~~~~~~L~~~~~~v~vid~-----------~~~~~~~~~---~~g~~~~------~gd---~~~~~~l 505 (609)
T Consensus 39 ~~vaIQGfGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (254)
T cd05313 39 KRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYFEGKKPW 118 (254)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEECCCCCHH
T ss_conf 99999897799999999999779979999857850887999988999999999974687102444138985663897513
Q ss_pred HHCCHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEC----CHHHHHHHHHCCC
Q ss_conf 848931467999935996899999999999589880899946----9899999997699
Q gi|254780924|r 506 LMANIEKARSLVVSISTAFEAAYITQEARNSNPSILIIALAD----SDSEVEHLTRYGA 560 (609)
Q Consensus 506 ~~~~i~~a~~vi~~~~~~~~n~~~~~~~~~~~~~~~iia~~~----~~~~~~~l~~~Ga 560 (609)
T Consensus 119 ----~~~cDIliPaA~en~I~~~nA~~i~a~--~ck~IvEgANgP~T~eAd~iL~~kGI 171 (254)
T cd05313 119 ----EVPCDIAFPCATQNEVDAEDAKLLVKN--GCKYVAEGANMPCTAEAIEVFRQAGV 171 (254)
T ss_pred ----HCCCCEEEECCCCCCCCHHHHHHHHHC--CCEEEEECCCCCCCHHHHHHHHHCCC
T ss_conf ----304769974354667899999999967--98299865889998789999998898