HHsearch alignment for GI: 254780924 and conserved domain: pfam00056
>pfam00056 Ldh_1_N lactate/malate dehydrogenase, NAD binding domain. L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold.
Probab=96.54 E-value=0.011 Score=35.27 Aligned_cols=96 Identities=19% Similarity=0.325 Sum_probs=61.3
Q ss_pred CEEEECCC-HHHHHHHHHHHHCCC--CEEEECCCHHHHHHHHHC--------CCCEEECCCCCHHHHHHCCHHHCCEEEE
Q ss_conf 17997377-489999999984799--089971998999999976--------9929997899989998489314679999
Q gi|254780924|r 450 HVILVGYG-RIGKVIVQNLKAAGI--ALLVIEDSEKKIEELRSL--------GIDVIYGNATITKILLMANIEKARSLVV 518 (609)
Q Consensus 450 ~vii~G~g-~~g~~~~~~L~~~~~--~v~vid~~~~~~~~~~~~--------g~~~~~gd~~~~~~l~~~~i~~a~~vi~ 518 (609)
T Consensus 2 KV~IIGagg~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~-~-----~~~~~daDiVVi 75 (142)
T pfam00056 2 KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGGD-D-----YEALKDADVVVI 75 (142)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEECCC-C-----HHHHCCCCEEEE
T ss_conf 8999898778999999999747966347885057764117999986144347887697488-3-----888378999998
Q ss_pred ECCCH-----------HHHH----HHHHHHHHHCCCCEEEEEECCHHHH
Q ss_conf 35996-----------8999----9999999958988089994698999
Q gi|254780924|r 519 SISTA-----------FEAA----YITQEARNSNPSILIIALADSDSEV 552 (609)
Q Consensus 519 ~~~~~-----------~~n~----~~~~~~~~~~~~~~iia~~~~~~~~ 552 (609)
T Consensus 76 taG~~~k~g~~R~dll~~Na~I~~~i~~~i~~~~p~~iv-ivvtNPvDv 123 (142)
T pfam00056 76 TAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIV-LVVSNPVDI 123 (142)
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE-EEECCCHHH
T ss_conf 157778999877899997469999999999976998199-994594688