HHsearch alignment for GI: 254780924 and conserved domain: pfam02254
>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=99.92 E-value=3.3e-24 Score=183.75 Aligned_cols=115 Identities=36% Similarity=0.590 Sum_probs=113.2
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHH
Q ss_conf 79973774899999999847990899719989999999769929997899989998489314679999359968999999
Q gi|254780924|r 451 VILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTAFEAAYIT 530 (609)
Q Consensus 451 vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~~~n~~~~ 530 (609)
T Consensus 1 viI~G~g~~G~~la~~L~~~~-~v~vId~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~ 79 (115)
T pfam02254 1 IIIIGYGRVGRSLAEELREGG-PVVVIDKDPERVEELREEGVPVVVGDATDEEVLEEAGIEDADAVVAATGDDEANILIV 79 (115)
T ss_pred CEEECCCHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCHHHHHHHH
T ss_conf 999878889999999998089-9999999879987788669869999568866787619202879999629849999999
Q ss_pred HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECH
Q ss_conf 999995898808999469899999997699878765
Q gi|254780924|r 531 QEARNSNPSILIIALADSDSEVEHLTRYGADTVVMS 566 (609)
Q Consensus 531 ~~~~~~~~~~~iia~~~~~~~~~~l~~~Ga~~vi~p 566 (609)
T Consensus 80 ~~~r~~~~~~~iiar~~~~~~~~~l~~~Gad~vi~P 115 (115)
T pfam02254 80 LLARELNPAKKIIARANDPEHAELLRRLGADEVISP 115 (115)
T ss_pred HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECC
T ss_conf 999997899809999878999999997698999792