HHsearch alignment for GI: 254780924 and conserved domain: pfam02254

>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=99.92  E-value=3.3e-24  Score=183.75  Aligned_cols=115  Identities=36%  Similarity=0.590  Sum_probs=113.2

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHH
Q ss_conf             79973774899999999847990899719989999999769929997899989998489314679999359968999999
Q gi|254780924|r  451 VILVGYGRIGKVIVQNLKAAGIALLVIEDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSISTAFEAAYIT  530 (609)
Q Consensus       451 vii~G~g~~g~~~~~~L~~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~~~~~~n~~~~  530 (609)
T Consensus         1 viI~G~g~~G~~la~~L~~~~-~v~vId~d~~~~~~~~~~~~~vi~GD~~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~   79 (115)
T pfam02254         1 IIIIGYGRVGRSLAEELREGG-PVVVIDKDPERVEELREEGVPVVVGDATDEEVLEEAGIEDADAVVAATGDDEANILIV   79 (115)
T ss_pred             CEEECCCHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEEEEECCCHHHHHHHH
T ss_conf             999878889999999998089-9999999879987788669869999568866787619202879999629849999999


Q ss_pred             HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECH
Q ss_conf             999995898808999469899999997699878765
Q gi|254780924|r  531 QEARNSNPSILIIALADSDSEVEHLTRYGADTVVMS  566 (609)
Q Consensus       531 ~~~~~~~~~~~iia~~~~~~~~~~l~~~Ga~~vi~p  566 (609)
T Consensus        80 ~~~r~~~~~~~iiar~~~~~~~~~l~~~Gad~vi~P  115 (115)
T pfam02254        80 LLARELNPAKKIIARANDPEHAELLRRLGADEVISP  115 (115)
T ss_pred             HHHHHHCCCCEEEEEECCHHHHHHHHHCCCCEEECC
T ss_conf             999997899809999878999999997698999792