HHsearch alignment for GI: 254780924 and conserved domain: pfam07021
>pfam07021 MetW Methionine biosynthesis protein MetW. This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in gram-positive bacteria and certain fungi, the second and third steps are a direct sulfhydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells.
Probab=94.83 E-value=0.085 Score=29.22 Aligned_cols=96 Identities=19% Similarity=0.082 Sum_probs=62.7
Q ss_pred CCEEEECCCHHHHHHHHHHH-HCCCCEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHCCHHHCCEEEEEC-----CC
Q ss_conf 81799737748999999998-4799089971998999999976992999789998999848931467999935-----99
Q gi|254780924|r 449 DHVILVGYGRIGKVIVQNLK-AAGIALLVIEDSEKKIEELRSLGIDVIYGNATITKILLMANIEKARSLVVSI-----ST 522 (609)
Q Consensus 449 ~~vii~G~g~~g~~~~~~L~-~~~~~v~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~i~~a~~vi~~~-----~~ 522 (609)
T Consensus 15 srVLDlGCG~G--~ll~~L~~~k~v~~~GvEid~~~v~~a~~kg~~Vi~~D~d--~~l~~f~d~sFD~VIls~vLqhl~~ 90 (193)
T pfam07021 15 SRVLDLGCGDG--SLLYLLQEEKQVDGRGIELDAAGVAECVAKGLSVIQGDAD--KGLEHFPDKSFDYVILSQTLQATRN 90 (193)
T ss_pred CEEEEECCCCC--HHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCEECCCHH--HCHHHCCCCCCCEEEHHHHHHHHCC
T ss_conf 98998368898--9999998766987698338999999998647954507744--5974577678037869879987528
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
Q ss_conf 6899999999999589880899946989999
Q gi|254780924|r 523 AFEAAYITQEARNSNPSILIIALADSDSEVE 553 (609)
Q Consensus 523 ~~~n~~~~~~~~~~~~~~~iia~~~~~~~~~ 553 (609)
T Consensus 91 P~~vL~---EmlRVg-k-~~IVSfPNf~hw~ 116 (193)
T pfam07021 91 PREVLD---ELLRIG-R-RAIVSFPNFGHWR 116 (193)
T ss_pred CHHHHH---HHHHHC-C-EEEEEECCHHHHH
T ss_conf 199999---985126-8-6999943614799