HHsearch alignment for GI: 254780925 and conserved domain: COG2409
>COG2409 Predicted drug exporters of the RND superfamily [General function prediction only].
Probab=99.58 E-value=3.5e-13 Score=94.74 Aligned_cols=153 Identities=16% Similarity=0.302 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-----HHCCCCC-HHHHHHHHHHHHHHHCCEEEEEEE
Q ss_conf 99999999999999999999-9899999999999999999999-----9757145-699999999997533574788721
Q gi|254780925|r 671 VGVIISAIAMLIYIWIRFKW-YFALGAITTLILDITKTLGFFA-----LFGIEFN-LTAVAAVLTLIGYSVNDKVVVYDR 743 (833)
Q Consensus 671 ~a~~~al~~I~i~i~~rf~~-~~~i~aiial~~~v~~~~g~~~-----~~g~~~~-~~~i~~~l~iiG~svd~~I~~~~R 743 (833)
T Consensus 761 ~~~i~~~~~i~ii~~i~~rs~~~~~~li~~v~~s~~~a~~l~~~~~~~~lg~~~~w~vp~~~f~~L~avG~dY~~~li~r 840 (937)
T COG2409 761 LVVIITLCLIFIILLILLRSVVAPAVLVGTVLLSYGAALGLSVLIWQHILGIELHWLVPALSFVVLLAVGSDYNILLISR 840 (937)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHEECCCHHHHHHHHH
T ss_conf 86899999999999999985002245566768999998652330330036875560013545453200360258899999
Q ss_pred EHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 0355550577999899999999877799999999999999999970534356638999999999999999-999999999
Q gi|254780925|r 744 MRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMAFGIVVAASSSI-FIAAPILLF 822 (833)
Q Consensus 744 irE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~~gvi~~~~~si-fi~~~~~~~ 822 (833)
T Consensus 841 ~ree~~~---g~-~~~-ii~a~~~tg~Vit~ag~i~~~t~~~l~~s~~~~l~qig~~i~~g~l~dt~v~r~~~vPa~~~l 915 (937)
T COG2409 841 LREEIGA---GL-RTG-IIRAMRGTGGVITAAGLIFAATMASLVFSDLRVLGQIGTTIGLGLLLDTLVVRPFMVPAIAAL 915 (937)
T ss_pred HHHHHHC---CC-CCC-CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9888714---77-530-010100567617877999999999765300178887767766647887544540577359998
Q ss_pred HHHHHH
Q ss_conf 863012
Q gi|254780925|r 823 IYDWRA 828 (833)
Q Consensus 823 ~~~~~~ 828 (833)
T Consensus 916 ~~~~~w 921 (937)
T COG2409 916 LGRWNW 921 (937)
T ss_pred HCCCCC
T ss_conf 246202