HHsearch alignment for GI: 254780925 and conserved domain: PRK09577
>PRK09577 multidrug efflux protein; Reviewed.
Probab=100.00 E-value=5.7e-30 Score=194.90 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 89999999999997303203566667777778899999999876655789999998653357899999998763102555
Q gi|254780925|r 368 IVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQS 447 (833)
Q Consensus 368 ~~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~ 447 (833)
T Consensus 873 lai~li~lvL~~~F~S~~~pliIl~~IPla~iG~~~~l~l~g~~ls~~s~iG~i~L~GIvVnn~IlLvd~~n~~~~~g~~ 952 (1032)
T PRK09577 873 LSVLVVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAKDLVAQRMS 952 (1032)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
T ss_conf 99999999999998518999999999999999999999997788029999999999999994733799999999986999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 79999999999999999765568999888761455---443114788778889987777511399999986136677
Q gi|254780925|r 448 VFCSLDMGFSRAYSTIFDSNITALIATVVLFFFGG---GAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMK 521 (833)
Q Consensus 448 ~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (833)
T Consensus 953 ~~~Ai~~A~~~RlRPIlmTtlTTi~GllPla~~~g~g~~~~~plai~iigGL~~sT~ltL~~vP~~Y~l~~r~~~~~ 1029 (1032)
T PRK09577 953 LADAALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQMAIGTGVLGGVITATVLAVFLVPLFFVVVGRLFDVG 1029 (1032)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999998787999999999999999986358847877648999999999999999999999999999862035