HHsearch alignment for GI: 254780925 and conserved domain: PRK10503

>PRK10503 multidrug efflux system subunit MdtB; Provisional.
Probab=100.00  E-value=0  Score=621.03  Aligned_cols=791  Identities=12%  Similarity=0.088  Sum_probs=548.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
Q ss_conf             97517999999999999999996310243404457420476742211012785499998433675189887899999998
Q gi|254780925|r    1 MRNNPWLVILYSMICCIGLLIALPNFLPQSMLDRFPSAMPKNRISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSF   80 (833)
Q Consensus         1 mr~~~~~~il~~~i~l~g~~~~lp~~~~~~~~~~~P~~~p~~~i~lGLDL~GG~~v~~~~~~~~~~~~~v~~~~e~l~~~   80 (833)
T Consensus        17 i~rpv~~~ll~~~i~~~G~~s-----~~~lp~~~~P~~~~p~i~---------V~t~~pGasp~~vE~~vt~plE~~l~~   82 (1040)
T PRK10503         17 ILRPVATTLLMVAILLAGIIG-----YRALPVSALPEVDYPTIQ---------VVTLYPGASPDVMTSAVTAPLERQFGQ   82 (1040)
T ss_pred             HHCHHHHHHHHHHHHHHHHHH-----HHHCCHHHCCCCCCCEEE---------EEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf             819099999999999999999-----983966218999995799---------999859999999999999999999718


Q ss_pred             HHHCCCEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEE-CCCCCCCEEEEEECCCCCCCHHH
Q ss_conf             62059126589831997999966976789999999999998744176544577314-23677511687513456651268
Q gi|254780925|r   81 LKKEGIGVFSMRQIQNKITLSFADSRFKENIADKVTLFLQGVNSKLNVDPKKNLLV-TTTEKEISIVLSQNNIDQVISHA  159 (833)
Q Consensus        81 v~~~~~~~sts~~~~~~I~V~f~~~~d~~~a~~~v~~~v~~~~~~lp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  159 (833)
T Consensus        83 v~gi~~i~S~s~~g~s~i~v~f~~~~d~~~a~~~v~~~v~~~~~~lP~~~~~p~i~~~~~~~~~pi~~~~~~~~~~~~--  160 (1040)
T PRK10503         83 MSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPIYSKVNPADPPIMTLAVTSTAMPM--  160 (1040)
T ss_pred             CCCCEEEEEEEECCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCH--
T ss_conf             999079999996892999999978999799999999999998873899677897440436776648999996699999--


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98778887631123103465421012573012333468988985412698999888740012344455565334666651
Q gi|254780925|r  160 IEQSMEIIRQRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFGVRFLRDSDGN  239 (833)
Q Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (833)
T Consensus       161 ~~l~~~~~~~l~~~L~~i~GV~~V~i~G~~~~ei~V~~dp~kL~~~gls~~~V~~ai~~~n~~~~~G~~~~~~~~~~v~~  240 (1040)
T PRK10503        161 TQVEDMVETRVAQKISQVSGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSA  240 (1040)
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCEEEEEEC
T ss_conf             99999999999999847999179997378717999996899998869899999999996076678842513876999973


Q ss_pred             EEECCCCCEEECCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf             00026750120211101111223333221000012332210110010000012322110000001332000123334432
Q gi|254780925|r  240 QYLVEDKVEISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKPLAVVLDGRVLTAPVINQAIPSGKAQI  319 (833)
Q Consensus       240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (833)
T Consensus       241 ~----------~~~~~~~~i~~i---------~i~~~-~G~~v~L~DvA~V~~~~~~~~~~~~~ng~~av~l~V~k~~~a  300 (1040)
T PRK10503        241 N----------DQMQSAEEYRQL---------IIAYQ-NGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGA  300 (1040)
T ss_pred             C----------CCCCCHHHHHHH---------HHHCC-CCCEEEECCEEEEECCCCCCCEEEEECCCCEEEEEEEECCCC
T ss_conf             7----------875899999777---------63047-994576044589731665654025887986299999945897


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             10135788765444321100001223333320110011024578888889999999999997303203566667777778
Q gi|254780925|r  320 SGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVI  399 (833)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii  399 (833)
T Consensus       301 n~i~v~~~V~~~l~e~~~~lP~gv~i~~~~D~s~~i~~~i~~l~~~~~~g~~lv~lvl~lfL~~~r~~liva~~IP~s~l  380 (1040)
T PRK10503        301 NIIATADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLI  380 (1040)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHH
T ss_conf             78999998998889988548998279998333398998888999999998999999999986432324023450157899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999987665578999999865335789999999876310255579999999999999999765568999888761
Q gi|254780925|r  400 LTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLFF  479 (833)
Q Consensus       400 ~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~  479 (833)
T Consensus       381 ~t~~~m~~~G~tlN~iSL~glilalG~lVDdaIVV~EnI~r~~~~G~~~~~Aa~~g~~ev~~~v~astlTti~vFlPl~f  460 (1040)
T PRK10503        381 GTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLF  460 (1040)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999998193288899999998643201014568998999997499889999999999888999999999999867774


Q ss_pred             CCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCE---EE-CCCCCEEEE
Q ss_conf             455---44311478877888998777751139999998613667755643--3322101012200---10-022210221
Q gi|254780925|r  480 FGG---GAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSIDIN--PLSRFFLIPDCIA---IQ-FMRARFWGV  550 (833)
Q Consensus       480 ~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---i~-f~~~~~~~~  550 (833)
T Consensus       461 ~~g~~G~~f~~~~~tv~~al~~SlivAltliP~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~Y~~~L~~~l~~~~~~l  540 (1040)
T PRK10503        461 MGDIVGRLFREFAVTLAVAILISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRVIAAYGRGLAKVLNHPWLTL  540 (1040)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57631145688999999999999999999989999984686432334515566678999999999999999984369999


Q ss_pred             ECCHHHCCCCCCCCCCCCCCC------------------------------------------------CCCC----CCC
Q ss_conf             100110021222112222345------------------------------------------------5555----660
Q gi|254780925|r  551 GISILFSICSICLLFTHGLNY------------------------------------------------GIDF----KGG  578 (833)
Q Consensus       551 ~~s~~li~~~~~~~~~~~~~~------------------------------------------------~~~~----~~~  578 (833)
T Consensus       541 ~i~~~~l~~~~~l~~~lp~~f~P~~d~~~~~v~i~~p~gtsl~~t~~~~~~ve~~l~~~p~v~~v~~~vG~~~~~~~~~~  620 (1040)
T PRK10503        541 SVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPTLNS  620 (1040)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
T ss_conf             99999999999999976866687677755999998699988999999999999998428771699999654688888640


Q ss_pred             EEEEEECC----CCCCHHHHHHHHHHHHHC--CCC-----CC-----CCCCCCCE-------------------------
Q ss_conf             37999717----757889998855554200--233-----32-----35687640-------------------------
Q gi|254780925|r  579 IQLGVLAN----RPVDLSVVRSNLESLQIG--DIS-----FQ-----NFDGEKNF-------------------------  617 (833)
Q Consensus       579 ~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~-----~~-----~~~~~~~~-------------------------  617 (833)
T Consensus       621 ~~i~i~L~~~~~r~~~~~ei~~~l~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~i~i~l~g~d~~~L~~~a~~l~~~L~~  700 (1040)
T PRK10503        621 ARLQINLKPLDERDDRVQQVIARLQTAVAKVPGVDLYLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPKLMNKLQQ  700 (1040)
T ss_pred             EEEEEEEEECHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf             69999974111004239999999999873489849994278777677777777559999479999999999999999865


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q gi|254780925|r  618 --------------------------------------------------------------------------------  617 (833)
Q Consensus       618 --------------------------------------------------------------------------------  617 (833)
                                                                                                      
T Consensus       701 ~~gv~~V~~~~~~~~~e~~i~idr~~a~~~Glt~~~v~~~l~~a~~g~~v~~~~~~~~~~~V~vr~~~~~~~~l~~L~~l  780 (1040)
T PRK10503        701 LPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTI  780 (1040)
T ss_pred             CCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHCCCHHHCCCCHHHCCE
T ss_conf             99935632455568826998448888986699878876777886178110233457740012212584323470333061


Q ss_pred             ----------------------------------EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-HHH
Q ss_conf             ----------------------------------244311555420235678877754101244433332111210-135
Q gi|254780925|r  618 ----------------------------------LVRLQYQPGDSVAQTRVLEMVKKKITEIVPLSTIQNTEIVGP-KIS  662 (833)
Q Consensus       618 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~  662 (833)
T Consensus       781 ~i~~~~G~~VpL~~va~i~~~~~~~~I~r~n~~r~v~V~~~i~~~~~~~~~~~~v~~~~~~~~l-P~g~~~~~~G~~~~~  859 (1040)
T PRK10503        781 RLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDGYSLGDAVQAIMDTEKTLNL-PADITTQFQGSTLAF  859 (1040)
T ss_pred             EEECCCCCEEEHHHEEEEEEECCCCEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHH
T ss_conf             4542789577810238999824861467406737999999738998889999999999872479-997399967068999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEE
Q ss_conf             789984579999999999999999999-9989999999999999999999997571456999999999975335747887
Q gi|254780925|r  663 RELIRKGIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFFALFGIEFNLTAVAAVLTLIGYSVNDKVVVY  741 (833)
Q Consensus       663 ~~~~~~~~~a~~~al~~I~i~i~~rf~-~~~~i~aiial~~~v~~~~g~~~~~g~~~~~~~i~~~l~iiG~svd~~I~~~  741 (833)
T Consensus       860 ~~~~~~~~~~~~~ai~lifliL~~~F~S~~~pliIl~~IPla~iG~~~~l~~~g~~l~~~s~iG~i~L~GIvvnNsIllv  939 (1040)
T PRK10503        860 QAALGSTVWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMI  939 (1040)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEH
T ss_conf             99998799999999999999999998439999999999999999999999997798209999999999999995734113


Q ss_pred             EEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             210355550577999899999999877799999999999999999970---53435663899999999999999999999
Q gi|254780925|r  742 DRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVW---GGSVIGSFAIPMAFGIVVAASSSIFIAAP  818 (833)
Q Consensus       742 ~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~---~~~~~~~f~~~~~~gvi~~~~~sifi~~~  818 (833)
T Consensus       940 d~~~~~~r--~~G~~~~~Ai~~a~~~R~RPIlmTtltti~GllPlal~~g~g~~~~~plAi~iigGL~~st~ltL~~vP~ 1017 (1040)
T PRK10503        940 DFALAAER--EQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPV 1017 (1040)
T ss_pred             HHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             47999999--7699989999999998688999999999999999987568957765140999999999999999999999


Q ss_pred             HHHHHHHHHHHC
Q ss_conf             999986301220
Q gi|254780925|r  819 ILLFIYDWRAKN  830 (833)
Q Consensus       819 ~~~~~~~~~~k~  830 (833)
T Consensus      1018 lY~l~~~~~~~~ 1029 (1040)
T PRK10503       1018 IYLLFDRLALWT 1029 (1040)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999998