HHsearch alignment for GI: 254780925 and conserved domain: PRK10503
>PRK10503 multidrug efflux system subunit MdtB; Provisional.
Probab=100.00 E-value=1.1e-30 Score=199.06 Aligned_cols=156 Identities=17% Similarity=0.163 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q ss_conf 88888999999999999730320356666777777889999999987665578999999865335789999999-87631
Q gi|254780925|r 364 GTCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNER-IREEN 442 (833)
Q Consensus 364 ~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~-~~~~~ 442 (833)
T Consensus 868 ~~~~~ai~lifliL~~~F~S~~~pliIl~~IPla~iG~~~~l~~~g~~l~~~s~iG~i~L~GIvvnNsIllvd~~~~~~r 947 (1040)
T PRK10503 868 WLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAER 947 (1040)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHH
T ss_conf 99999999999999999843999999999999999999999999779820999999999999999573411347999999
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 02555799999999999999997655689998887614---554431147887788899877775113999999861366
Q gi|254780925|r 443 RKNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLFFF---GGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKK 519 (833)
Q Consensus 443 ~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (833)
T Consensus 948 ~~G~~~~~Ai~~a~~~R~RPIlmTtltti~GllPlal~~g~g~~~~~plAi~iigGL~~st~ltL~~vP~lY~l~~~~~~ 1027 (1040)
T PRK10503 948 EQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLAL 1027 (1040)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76999899999999986889999999999999999875689577651409999999999999999999999999999999