HHsearch alignment for GI: 254780925 and conserved domain: PRK10555
>PRK10555 aminoglycoside/multidrug efflux system; Provisional.
Probab=100.00 E-value=1.9e-29 Score=191.70 Aligned_cols=154 Identities=17% Similarity=0.163 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 99999999999973032035666677777788999999998766557899999986533578999999987631025557
Q gi|254780925|r 369 VAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSV 448 (833)
Q Consensus 369 ~~~lvvvvv~l~l~~~r~~li~~iaIpisii~tl~~l~~~G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~ 448 (833)
T Consensus 878 al~li~liL~~~F~S~~~pliIl~~IPl~~iG~~l~l~l~g~~l~~~s~iG~i~L~GIvVnn~Illvd~~n~~~~~g~~~ 957 (1037)
T PRK10555 878 SLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDL 957 (1037)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCH
T ss_conf 99999999999985199999999999999999999999986882599999999999999838407999999999869999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999999999999997655689998887614---554431147887788899877775113999999861366775
Q gi|254780925|r 449 FCSLDMGFSRAYSTIFDSNITALIATVVLFFF---GGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKS 522 (833)
Q Consensus 449 ~~a~~~~~~~~~~~i~~~~~t~~~~~~~l~~~---~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (833)
T Consensus 958 ~~Ai~~a~~~RlRPIlmTtlTTi~GllPlal~~g~g~~~~~plai~iigGL~~st~ltL~~vP~ly~l~~r~~~~~~ 1034 (1037)
T PRK10555 958 FEATLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLVRRRFPLKP 1034 (1037)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999984889999999999999999842688588762179999999999999999999999999880568997