HHsearch alignment for GI: 254780925 and conserved domain: PRK12933

>PRK12933 secD preprotein translocase subunit SecD; Reviewed.
Probab=100.00  E-value=0  Score=489.67  Aligned_cols=504  Identities=34%  Similarity=0.597  Sum_probs=428.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCC--------------------------------------------------
Q ss_conf             751799999999999999999631024340--------------------------------------------------
Q gi|254780925|r    2 RNNPWLVILYSMICCIGLLIALPNFLPQSM--------------------------------------------------   31 (833)
Q Consensus         2 r~~~~~~il~~~i~l~g~~~~lp~~~~~~~--------------------------------------------------   31 (833)
T Consensus        12 ~yplWKylli~~vl~~g~lYAlPNly~~~pAvQIs~~~~~~~~~~~~~~~L~~~~I~~~~~~~~~~~~~irf~~~~~Ql~   91 (604)
T PRK12933         12 HYSAWKYVVLIVTIIIMLLSALPTWYGEDAAVQVSAKAGLLLTPVALRQLLQAQGINVKRIDQKEGKTLIVLDDDSQQSQ   91 (604)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEEEEECCHHHHHH
T ss_conf             07578999999999999997483458998738986687775789999999997799863257518828999798888999


Q ss_pred             -------------------HHHCCCCCC---CCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             -------------------445742047---6742211012785499998433675189887899999998620591265
Q gi|254780925|r   32 -------------------LDRFPSAMP---KNRISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSFLKKEGIGVF   89 (833)
Q Consensus        32 -------------------~~~~P~~~p---~~~i~lGLDL~GG~~v~~~~~~~~~~~~~v~~~~e~l~~~v~~~~~~~s   89 (833)
T Consensus        92 Ak~~l~~~l~~~~~VALnlap~tP~WL~~iGa~Pm~LGLDLrGGvhfLLeVD~~~av~~rle~~~~dir~~LR~~~Ir~~  171 (604)
T PRK12933         92 AKTLLSSMVKEPKELTLSLASAAPSWLQNMGFSPIKLGLDLRGGVQFLLDVDVDPVYQEQRDALVDSLRQFLREQGIRGV  171 (604)
T ss_pred             HHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999987288827998679998199996699773134314784189999748999999999899999999997598631


Q ss_pred             EEEE-ECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf             8983-199799996697678999999999999874417654457731423677511687513456651268987788876
Q gi|254780925|r   90 SMRQ-IQNKITLSFADSRFKENIADKVTLFLQGVNSKLNVDPKKNLLVTTTEKEISIVLSQNNIDQVISHAIEQSMEIIR  168 (833)
Q Consensus        90 ts~~-~~~~I~V~f~~~~d~~~a~~~v~~~v~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (833)
T Consensus       172 ~i~~~~~~~i~v~~~~~~~~~~a~~~l~~~-------~~~----~~~~~~~~~~l~l~~se~~~~~i~~~Av~Q~ieilR  240 (604)
T PRK12933        172 SVRLDDTDQLNVTLPDNDARSAVRQFIQQN-------YPN----WQVTNSDDRGLQLKLSQQEKTKLRNLTVQQNLQIMR  240 (604)
T ss_pred             EEEECCCCEEEEEECCHHHHHHHHHHHHHH-------CCC----EEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf             146547986999968988999999999850-------997----189746996699998999999999999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCE
Q ss_conf             31123103465421012573012333468988985412698999888740012344455565334666651000267501
Q gi|254780925|r  169 QRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFGVRFLRDSDGNQYLVEDKVE  248 (833)
Q Consensus       169 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (833)
T Consensus       241 nRVdeLGVsEP~IQrQG~dRIvVqLPGvqD~~rAk~iLG~TA~LeFr~V~~~~~~-----~~~~~~d~~g~~~~l~k~~i  315 (604)
T PRK12933        241 SRIEELGITEALVQRQGEHRIRIELPGVQDPAAAKNVIGATASLAFYEVKESGSV-----NAKVLKDKSGRPVYVARRPV  315 (604)
T ss_pred             HHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCC-----CCEEEECCCCCEEEEECCCC
T ss_conf             7653006788717997795799988999999999998634644899974677875-----65220158897565303553


Q ss_pred             EECCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHCCCHHHCCCCCCCC-------------CCCCCCCCCCEEECCCCC
Q ss_conf             2021110111122333322100001233221011001000001232211-------------000000133200012333
Q gi|254780925|r  249 ISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKPLAVV-------------LDGRVLTAPVINQAIPSG  315 (833)
Q Consensus       249 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~  315 (833)
T Consensus       316 ltG~~i~dA~~~~dq~-g~p~V~~~ld~~Ga~~f~~~T~~NiGk~mAiv~~e~~~~~~~~iv~~~~Visap~I~~~i-g~  393 (604)
T PRK12933        316 LGGDHIVDARASLGEM-GMAEVNISLDRIGGKKMSDFSRDNIGKPMATSYSEYSRDEQGKAKQSQEVISVATIQSQL-GD  393 (604)
T ss_pred             CCCCCCCCCCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCEEECCCCCCCC-CC
T ss_conf             3675323564465778-983599971742658999998873366055888774125567334238467426102346-88


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             44321013578876544432110000122333332011001102457888888999999999999730320356666777
Q gi|254780925|r  316 KAQISGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIF  395 (833)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIp  395 (833)
T Consensus       394 ~~~ItG~ft~~eA~dLA~lLraGaLpap~~iveertVGpsLG~dsi~~g~~A~~iG~~lV~~fM~~~Yr~~G~iA~iaL~  473 (604)
T PRK12933        394 RFRITGAGSYQEAQQLALLLRAGSMTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALWYRRLGWVANVALI  473 (604)
T ss_pred             CCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             75584578788899999998559988876777888528555599999999999999999999999998552999999999


Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7778899999999-876655789999998653357899999998763102555799999999999999997655689998
Q gi|254780925|r  396 LNVILTLALLSLL-GATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITALIAT  474 (833)
Q Consensus       396 isii~tl~~l~~~-G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~  474 (833)
T Consensus       474 ~n~~l~~~~ls~l~gatLTLPGIAGivLtiGmAVDaNVlifERirEElr~G~~~~~Ai~~Gf~~A~~tI~DaNiTtliaa  553 (604)
T PRK12933        474 ANMVCLFGLLALIPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIKDKLKEGRSFALAIDTGFDSAFSTIFDANFTTMITA  553 (604)
T ss_pred             HHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999850722736669999987511024151374888999976998799999999999999999759999999


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             8876145544311478877888998777751139999998613667755
Q gi|254780925|r  475 VVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSI  523 (833)
Q Consensus       475 ~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (833)
T Consensus       554 ~iLf~~GtGpVkGFAvtL~iGi~~SmfTai~~tR~l~~~~ygr~~~~~~  602 (604)
T PRK12933        554 VVLYSIGNGPIQGFALTLGLGLLTSMFTGIFASRALINLVYGRDARRDV  602 (604)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9999965778148999999999999999999999999999737765556