HHsearch alignment for GI: 254780925 and conserved domain: PRK12933
>PRK12933 secD preprotein translocase subunit SecD; Reviewed.
Probab=100.00 E-value=0 Score=489.67 Aligned_cols=504 Identities=34% Similarity=0.597 Sum_probs=428.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHCCCCC--------------------------------------------------
Q ss_conf 751799999999999999999631024340--------------------------------------------------
Q gi|254780925|r 2 RNNPWLVILYSMICCIGLLIALPNFLPQSM-------------------------------------------------- 31 (833)
Q Consensus 2 r~~~~~~il~~~i~l~g~~~~lp~~~~~~~-------------------------------------------------- 31 (833)
T Consensus 12 ~yplWKylli~~vl~~g~lYAlPNly~~~pAvQIs~~~~~~~~~~~~~~~L~~~~I~~~~~~~~~~~~~irf~~~~~Ql~ 91 (604)
T PRK12933 12 HYSAWKYVVLIVTIIIMLLSALPTWYGEDAAVQVSAKAGLLLTPVALRQLLQAQGINVKRIDQKEGKTLIVLDDDSQQSQ 91 (604)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEEEEECCHHHHHH
T ss_conf 07578999999999999997483458998738986687775789999999997799863257518828999798888999
Q ss_pred -------------------HHHCCCCCC---CCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf -------------------445742047---6742211012785499998433675189887899999998620591265
Q gi|254780925|r 32 -------------------LDRFPSAMP---KNRISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSFLKKEGIGVF 89 (833)
Q Consensus 32 -------------------~~~~P~~~p---~~~i~lGLDL~GG~~v~~~~~~~~~~~~~v~~~~e~l~~~v~~~~~~~s 89 (833)
T Consensus 92 Ak~~l~~~l~~~~~VALnlap~tP~WL~~iGa~Pm~LGLDLrGGvhfLLeVD~~~av~~rle~~~~dir~~LR~~~Ir~~ 171 (604)
T PRK12933 92 AKTLLSSMVKEPKELTLSLASAAPSWLQNMGFSPIKLGLDLRGGVQFLLDVDVDPVYQEQRDALVDSLRQFLREQGIRGV 171 (604)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999987288827998679998199996699773134314784189999748999999999899999999997598631
Q ss_pred EEEE-ECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8983-199799996697678999999999999874417654457731423677511687513456651268987788876
Q gi|254780925|r 90 SMRQ-IQNKITLSFADSRFKENIADKVTLFLQGVNSKLNVDPKKNLLVTTTEKEISIVLSQNNIDQVISHAIEQSMEIIR 168 (833)
Q Consensus 90 ts~~-~~~~I~V~f~~~~d~~~a~~~v~~~v~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (833)
T Consensus 172 ~i~~~~~~~i~v~~~~~~~~~~a~~~l~~~-------~~~----~~~~~~~~~~l~l~~se~~~~~i~~~Av~Q~ieilR 240 (604)
T PRK12933 172 SVRLDDTDQLNVTLPDNDARSAVRQFIQQN-------YPN----WQVTNSDDRGLQLKLSQQEKTKLRNLTVQQNLQIMR 240 (604)
T ss_pred EEEECCCCEEEEEECCHHHHHHHHHHHHHH-------CCC----EEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_conf 146547986999968988999999999850-------997----189746996699998999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCE
Q ss_conf 31123103465421012573012333468988985412698999888740012344455565334666651000267501
Q gi|254780925|r 169 QRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFGVRFLRDSDGNQYLVEDKVE 248 (833)
Q Consensus 169 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (833)
T Consensus 241 nRVdeLGVsEP~IQrQG~dRIvVqLPGvqD~~rAk~iLG~TA~LeFr~V~~~~~~-----~~~~~~d~~g~~~~l~k~~i 315 (604)
T PRK12933 241 SRIEELGITEALVQRQGEHRIRIELPGVQDPAAAKNVIGATASLAFYEVKESGSV-----NAKVLKDKSGRPVYVARRPV 315 (604)
T ss_pred HHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCC-----CCEEEECCCCCEEEEECCCC
T ss_conf 7653006788717997795799988999999999998634644899974677875-----65220158897565303553
Q ss_pred EECCEECCCCCCCCCCCCCCCEECCCCCCCCCHHHCCCHHHCCCCCCCC-------------CCCCCCCCCCEEECCCCC
Q ss_conf 2021110111122333322100001233221011001000001232211-------------000000133200012333
Q gi|254780925|r 249 ISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKPLAVV-------------LDGRVLTAPVINQAIPSG 315 (833)
Q Consensus 249 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 315 (833)
T Consensus 316 ltG~~i~dA~~~~dq~-g~p~V~~~ld~~Ga~~f~~~T~~NiGk~mAiv~~e~~~~~~~~iv~~~~Visap~I~~~i-g~ 393 (604)
T PRK12933 316 LGGDHIVDARASLGEM-GMAEVNISLDRIGGKKMSDFSRDNIGKPMATSYSEYSRDEQGKAKQSQEVISVATIQSQL-GD 393 (604)
T ss_pred CCCCCCCCCCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCEEECCCCCCCC-CC
T ss_conf 3675323564465778-983599971742658999998873366055888774125567334238467426102346-88
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 44321013578876544432110000122333332011001102457888888999999999999730320356666777
Q gi|254780925|r 316 KAQISGNFTIETAGILAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIF 395 (833)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvvvvv~l~l~~~r~~li~~iaIp 395 (833)
T Consensus 394 ~~~ItG~ft~~eA~dLA~lLraGaLpap~~iveertVGpsLG~dsi~~g~~A~~iG~~lV~~fM~~~Yr~~G~iA~iaL~ 473 (604)
T PRK12933 394 RFRITGAGSYQEAQQLALLLRAGSMTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALWYRRLGWVANVALI 473 (604)
T ss_pred CCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75584578788899999998559988876777888528555599999999999999999999999998552999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7778899999999-876655789999998653357899999998763102555799999999999999997655689998
Q gi|254780925|r 396 LNVILTLALLSLL-GATLTLPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITALIAT 474 (833)
Q Consensus 396 isii~tl~~l~~~-G~tLn~~sl~gl~~~~g~~vd~~i~~~e~~~~~~~~~~~~~~a~~~~~~~~~~~i~~~~~t~~~~~ 474 (833)
T Consensus 474 ~n~~l~~~~ls~l~gatLTLPGIAGivLtiGmAVDaNVlifERirEElr~G~~~~~Ai~~Gf~~A~~tI~DaNiTtliaa 553 (604)
T PRK12933 474 ANMVCLFGLLALIPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIKDKLKEGRSFALAIDTGFDSAFSTIFDANFTTMITA 553 (604)
T ss_pred HHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999850722736669999987511024151374888999976998799999999999999999759999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 8876145544311478877888998777751139999998613667755
Q gi|254780925|r 475 VVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSI 523 (833)
Q Consensus 475 ~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (833)
T Consensus 554 ~iLf~~GtGpVkGFAvtL~iGi~~SmfTai~~tR~l~~~~ygr~~~~~~ 602 (604)
T PRK12933 554 VVLYSIGNGPIQGFALTLGLGLLTSMFTGIFASRALINLVYGRDARRDV 602 (604)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999965778148999999999999999999999999999737765556