HHsearch alignment for GI: 254780925 and conserved domain: PRK12933
>PRK12933 secD preprotein translocase subunit SecD; Reviewed.
Probab=100.00 E-value=2.1e-31 Score=203.43 Aligned_cols=183 Identities=20% Similarity=0.435 Sum_probs=170.0
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHH
Q ss_conf 12444333321112101357899845799999999999999999999989999999999999999999997-57145699
Q gi|254780925|r 644 EIVPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFKWYFALGAITTLILDITKTLGFFALF-GIEFNLTA 722 (833)
Q Consensus 644 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~a~~~al~~I~i~i~~rf~~~~~i~aiial~~~v~~~~g~~~~~-g~~~~~~~ 722 (833)
T Consensus 417 aLpap~~iveertVGpsLG~dsi~~g~~A~~iG~~lV~~fM~~~Yr-~~G~iA~iaL~~n~~l~~~~ls~l~gatLTLPG 495 (604)
T PRK12933 417 SMTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALWYR-RLGWVANVALIANMVCLFGLLALIPGAVLTLPG 495 (604)
T ss_pred CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHH
T ss_conf 9888767778885285555999999999999999999999999985-529999999999999999999985072273666
Q ss_pred HHHHHHHHHHHHCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99999999753357478872103555505779998999999998777999999999999999999705343566389999
Q gi|254780925|r 723 VAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMA 802 (833)
Q Consensus 723 i~~~l~iiG~svd~~I~~~~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~ 802 (833)
T Consensus 496 IAGivLtiGmAVDaNVlifERirEElr---~G~~~~~Ai~~Gf~~A~~tI~DaNiTtliaa~iLf~~GtGpVkGFAvtL~ 572 (604)
T PRK12933 496 IAGLVLTVGMAVDTNVLIFERIKDKLK---EGRSFALAIDTGFDSAFSTIFDANFTTMITAVVLYSIGNGPIQGFALTLG 572 (604)
T ss_pred HHHHHHHHHHHEECCCHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 999998751102415137488899997---69987999999999999999997599999999999965778148999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999986301220
Q gi|254780925|r 803 FGIVVAASSSIFIAAPILLFIYDWRAKN 830 (833)
Q Consensus 803 ~gvi~~~~~sifi~~~~~~~~~~~~~k~ 830 (833)
T Consensus 573 iGi~~SmfTai~~tR~l~~~~ygr~~~~ 600 (604)
T PRK12933 573 LGLLTSMFTGIFASRALINLVYGRDARR 600 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999999999999997377655