HHsearch alignment for GI: 254780925 and conserved domain: PRK12933

>PRK12933 secD preprotein translocase subunit SecD; Reviewed.
Probab=100.00  E-value=2.1e-31  Score=203.43  Aligned_cols=183  Identities=20%  Similarity=0.435  Sum_probs=170.0

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHH
Q ss_conf             12444333321112101357899845799999999999999999999989999999999999999999997-57145699
Q gi|254780925|r  644 EIVPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFKWYFALGAITTLILDITKTLGFFALF-GIEFNLTA  722 (833)
Q Consensus       644 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~a~~~al~~I~i~i~~rf~~~~~i~aiial~~~v~~~~g~~~~~-g~~~~~~~  722 (833)
T Consensus       417 aLpap~~iveertVGpsLG~dsi~~g~~A~~iG~~lV~~fM~~~Yr-~~G~iA~iaL~~n~~l~~~~ls~l~gatLTLPG  495 (604)
T PRK12933        417 SMTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALWYR-RLGWVANVALIANMVCLFGLLALIPGAVLTLPG  495 (604)
T ss_pred             CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHH
T ss_conf             9888767778885285555999999999999999999999999985-529999999999999999999985072273666


Q ss_pred             HHHHHHHHHHHHCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf             99999999753357478872103555505779998999999998777999999999999999999705343566389999
Q gi|254780925|r  723 VAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMA  802 (833)
Q Consensus       723 i~~~l~iiG~svd~~I~~~~RirE~~~~~~~~~~~~~~v~~~~~~~~~~~i~ts~tt~~~~~~l~~~~~~~~~~f~~~~~  802 (833)
T Consensus       496 IAGivLtiGmAVDaNVlifERirEElr---~G~~~~~Ai~~Gf~~A~~tI~DaNiTtliaa~iLf~~GtGpVkGFAvtL~  572 (604)
T PRK12933        496 IAGLVLTVGMAVDTNVLIFERIKDKLK---EGRSFALAIDTGFDSAFSTIFDANFTTMITAVVLYSIGNGPIQGFALTLG  572 (604)
T ss_pred             HHHHHHHHHHHEECCCHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             999998751102415137488899997---69987999999999999999997599999999999965778148999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999986301220
Q gi|254780925|r  803 FGIVVAASSSIFIAAPILLFIYDWRAKN  830 (833)
Q Consensus       803 ~gvi~~~~~sifi~~~~~~~~~~~~~k~  830 (833)
T Consensus       573 iGi~~SmfTai~~tR~l~~~~ygr~~~~  600 (604)
T PRK12933        573 LGLLTSMFTGIFASRALINLVYGRDARR  600 (604)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999999999999999999997377655