PSIBLAST alignment of GI: 254780925 and protein with PDB id: 1oy6
gi|31615949|pdb|1OY6|A Chain A, Structural Basis Of The Multiple Binding Capacity Of The Acrb Multidrug Efflux Pump Length = 1049
>gi|31615950|pdb|1OY8|A Chain A, Structural Basis Of Multiple Drug Binding Capacity Of The Acrb Multidrug Efflux Pump Length = 1049
Score = 75.1 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 82/231 (35%), Gaps = 6/231 (2%)
Query: 593 VVRSNLESLQIGDISFQNFDGEKNFLVRLQYQPGDSVAQTRVLEMVKKKITEIVPLSTIQ 652
V + DI + + L +++ + K+ P
Sbjct: 264 DVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKI 323
Query: 653 NTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFK-WYFALGAITTLILDITKTLGFF 711
+ I + + ++ + I + + +++ + + L + + + T
Sbjct: 324 VYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVL 383
Query: 712 ALFGIEFNLTAVAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTSISFRDLIDKSINETLGR 771
A FG N + ++ IG V+D +VV + + + + ++ KS+ + G
Sbjct: 384 AAFGFSINTLTMFGMVLAIGLLVDDAIVVVENV--ERVMAEEGLPPKEATRKSMGQIQGA 441
Query: 772 SVYTSMAAFISVLPMAVWGGSV---IGSFAIPMAFGIVVAASSSIFIAAPI 819
V +M +PMA +GGS F+I + + ++ ++ + +
Sbjct: 442 LVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPAL 492