RPSBLAST alignment for GI: 254780925 and conserved domain: PRK12933

>gnl|CDD|183831 PRK12933, secD, preprotein translocase subunit SecD; Reviewed. Length = 604
 Score =  300 bits (770), Expect = 9e-82
 Identities = 167/487 (34%), Positives = 276/487 (56%), Gaps = 43/487 (8%)

Query: 44  ISLGLDLRGGSHLVLEVDEDDFVNGFLQMYSDELRSFLKKEGIGVFSMRQIQ-NKITLSF 102
           I LGLDLRGG   +L+VD D           D +R FL+++ I   S+R    +++ ++ 
Sbjct: 126 IKLGLDLRGGVQFLLDVDVDPVYQEQRDALVDSVRQFLREQRIRGVSVRLDDSDQLAVTT 185

Query: 103 ADSRFKENIADKVTLFLQGVNSKLNVDPKKNL----LVTTTEKEISIVLSQNNIDQVISH 158
            D+  +      V  F+Q           +N     +  + ++ + + LSQ    +  + 
Sbjct: 186 PDNDARS----AVRQFIQ-----------QNYPGWQVTNSDDRGLQLKLSQQEKTKFRNL 230

Query: 159 AIEQSMEIIRQRIDQIGISESTIQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVL 218
            ++Q+++I+R RI+++GI+E+ +QR G HRI I+LPG QDP+  + ++G TA ++F++V 
Sbjct: 231 TVQQNLQIMRSRIEELGITEALVQRQGEHRIRIELPGVQDPAAAKNVIGATASLAFYEVK 290

Query: 219 PNNSKKGFMFGVRFLRDSDGNQYLVEDKVEISGIHLNGATANFDPKTHKPVVDISFDEMG 278
            + S        + L+D +G    V  +  + G H+  A A+   +     V+IS D  G
Sbjct: 291 ESGS-----VNAKVLKDKNGRPVYVARRPVLGGEHIVDARASLG-EMGMAEVNISLDRAG 344

Query: 279 ARRFFEVTRDNIGKPLAVVL--------DGRVLTAPVINQAIPSGKAQISGNFTIETAGI 330
            ++  + +RDNIGKP+A                +  VI+ A  + ++Q+   F I  AG 
Sbjct: 345 GKKMSDFSRDNIGKPMATSYSEYSRDEQGKTKQSEEVISVA--TIQSQLGDRFRITGAGS 402

Query: 331 ------LAAMLRAGSLPIKLNIVEERNVGADLGSDSIYKGTCAIVAGLVLIVLFMIVLYG 384
                 LA +LRAGSL   + IVEER +G  LG+++I  G  A+  G+ + +LFM + Y 
Sbjct: 403 YQEAQQLALLLRAGSLTAPVTIVEERTIGPSLGAENIENGFAALALGMGITLLFMALWYR 462

Query: 385 KWGLVADFSIFLNVILTLALLSLL-GATLTLPSIAGIVLGIGLAVDSNILVNERIREENR 443
           + G VA+ ++  N++    LL+L+ GA LTLP IAG+VL +G+AVD+N+L+ ERI+++ +
Sbjct: 463 RLGWVANVALIANMVCLFGLLALIPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIKDKLK 522

Query: 444 KNQSVFCSLDMGFSRAYSTIFDSNITALIATVVLFFFGGGAVRGFAITMGLSILISMFTA 503
           + +S   ++D GF  A+STIFD+N T +I  VVL+  G G ++GFA+T+GL +L SMFT 
Sbjct: 523 EGRSFAQAIDTGFDSAFSTIFDANFTTMITAVVLYSIGNGPIQGFALTLGLGLLTSMFTG 582

Query: 504 ISIVRAM 510
           I   RA+
Sbjct: 583 IFASRAL 589