RPSBLAST alignment for GI: 254780925 and conserved domain: COG0342

>gnl|CDD|30690 COG0342, SecD, Preprotein translocase subunit SecD [Intracellular trafficking and secretion]. Length = 506
 Score =  415 bits (1067), Expect = e-116
 Identities = 217/532 (40%), Positives = 323/532 (60%), Gaps = 34/532 (6%)

Query: 1   MRNNPWLVILYSMICCIGLLIALPNFLPQSMLDRFPSAMPKNRISLGLDLRGGSHLVLEV 60
           MR + W   L +++  IG+L AL           + + +  N + LGLDLRGG H++LEV
Sbjct: 2   MRFSRWKKQLLALVVLIGILFAL--------NLSWLAKLKVNPMKLGLDLRGGVHILLEV 53

Query: 61  DEDDFVNGFLQMYSDELRSFLKKEGIGVFSMRQIQNKITLSFADSRFKENIADKVTLFLQ 120
           D    +   L+  +D+LRS L+KEG+    +R   N IT+   D+   +     + L  +
Sbjct: 54  DMPTALKKRLEQLADDLRSRLRKEGVSYSGVRVEGNGITVPLRDAAELDKARKLLRLLHR 113

Query: 121 GVNSKLNVDPKKNLLVTTTEKEISIVLSQNNIDQVISHAIEQSMEIIRQRIDQIGISEST 180
           GV                    + + L++  +D++   A++Q++ I+R R++++G++E  
Sbjct: 114 GV-------------------VLFLALTEAELDEIRKDAVQQNITILRNRVNELGVAEPV 154

Query: 181 IQRLGSHRILIQLPGEQDPSRLRQLLGTTAKMSFHKVLPNNSKKGFMFG-------VRFL 233
           IQR G+ RI+++LPG QD +R + LLG TA + F  V  +        G       V  L
Sbjct: 155 IQRQGADRIVVELPGVQDTARAKDLLGKTATLEFRLVDDSVKLADAADGLAPAGSEVLKL 214

Query: 234 RDSDGNQYLVEDKVEISGIHLNGATANFDPKTHKPVVDISFDEMGARRFFEVTRDNIGKP 293
                   L++ +V ++G H+  AT  FD + ++PVV+ S D  GAR F + T+ N+GK 
Sbjct: 215 DREGNRPVLLKKRVILTGDHITDATVGFDQRGNQPVVNFSLDSEGARIFADFTKANVGKR 274

Query: 294 LAVVLDGRVLTAPVINQAIPSGKAQISGNFTIETAGILAAMLRAGSLPIKLNIVEERNVG 353
           +A+VLDG+V++APVIN+AI  G  QI+GNFT E A  LA +LR+G+LP  L IVEER VG
Sbjct: 275 MAIVLDGQVISAPVINEAITGGSGQITGNFTAEEARDLALLLRSGALPAPLEIVEERTVG 334

Query: 354 ADLGSDSIYKGTCAIVAGLVLIVLFMIVLYGKWGLVADFSIFLNVILTLALLSLLGATLT 413
             LG+DSI  G  A + GL L+ +FM++ Y   G++A  ++ LN +L LA+LSLLGATLT
Sbjct: 335 PTLGADSIKAGLIAGLIGLALVAVFMLLYYRLAGVIAAIALGLNGVLILAVLSLLGATLT 394

Query: 414 LPSIAGIVLGIGLAVDSNILVNERIREENRKNQSVFCSLDMGFSRAYSTIFDSNITALIA 473
           LP IAGI+L IG+AVD+N+L+ ERIREE R  +SV  ++D GF RA+STI DSN T LIA
Sbjct: 395 LPGIAGIILTIGMAVDANVLIFERIREELRNGKSVLSAIDAGFKRAFSTILDSNATTLIA 454

Query: 474 TVVLFFFGGGAVRGFAITMGLSILISMFTAISIVRAMMIFIIRYKKMKSIDI 525
             +LF  G G V+GFA+T+ L IL SMFTAI + R ++  ++  +++K + I
Sbjct: 455 AAILFALGTGPVKGFAVTLILGILTSMFTAIPVTRLLLNLLVGRRRLKKLSI 506