RPSBLAST alignment for GI: 254780925 and conserved domain: COG0841

>gnl|CDD|31183 COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]. Length = 1009

 Score = 48.3 bits (115), Expect = 9e-06
 Identities = 47/242 (19%), Positives = 96/242 (39%), Gaps = 28/242 (11%)

Query: 593 VVRSNLESLQIGDI-----------SFQNFDGEKNFLVRLQYQPGDSVAQTRVLEMVKKK 641
           +V+SN   +++ D+           S    +G+    + ++  PG +       + VK K
Sbjct: 243 IVKSNGAVVRLKDVARVELGAEDYTSIARLNGKPAVGLAVKKAPGANALD--TAKAVKAK 300

Query: 642 ITEI-------VPLSTIQNTEIVGPKISRELIRKGIVGVIISAIAMLIYIWIRFKWYFAL 694
           + E+       V ++   +T         E+I+     +++  + M +++         L
Sbjct: 301 LAELQANLPQGVDIAIPYDTTEFIKASIEEVIKTLFEAIVLVVLVMYLFLG---NLRATL 357

Query: 695 GAITTLILDITKTLGFFALFGIEFNLTAVAAVLTLIGYSVNDKVVVYDRMRKNMKLYTTS 754
                + + +  T      FG   N   + A++  IG  V+D +VV + + ++M+     
Sbjct: 358 IPALAVPVSLLGTFAVMYAFGFSLNTLTLFALVLAIGLLVDDAIVVVENIERHMRGLPP- 416

Query: 755 ISFRDLIDKSINETLGRSVYTSMAAFISVLPMAVWGGSVIGSFAIPMAFGIVVAASSSIF 814
              R+  +K++ E  G  +  ++      LPMA  GG   G      A  I VA   S+ 
Sbjct: 417 ---REAAEKAMGEIGGAVIAITLVLIAVFLPMAFMGG-STGELFRQFAITIAVAMLLSLL 472

Query: 815 IA 816
           +A
Sbjct: 473 VA 474