HHsearch alignment for GI: 254780927 and conserved domain: PRK04204
>PRK04204 RNA 3'-terminal-phosphate cyclase; Provisional.
Probab=93.65 E-value=0.57 Score=25.81 Aligned_cols=84 Identities=14% Similarity=0.269 Sum_probs=53.7
Q ss_pred HHHHHHHHC----CCCCCC-CCCCEEEEEECCCCCCCCCCCCCCCCCCEE----EEEEECCCCCCCCCCC-----CCCCC
Q ss_conf 234333210----332245-686148999502443333333434666113----5665044446873323-----32220
Q gi|254780927|r 135 LFVDSLKSL----GVVIKI-DGGYVDARVSSKGLRGTSYTFPKVSVGATQ----VMMMVASLSHGDTSIY-----NAARE 200 (430)
Q Consensus 135 ~l~~~L~~l----Ga~i~~-~~g~~p~~i~g~~l~g~~i~l~~~S~q~~s----~lLlaA~~a~G~t~I~-----~~~~~ 200 (430)
T Consensus 47 QHl~~l~l~~~i~~a~v~g~~~GSt~l~F~Pg~i~~g~~~~d~gTAgSi~L~lQ~~Lp~l~f~~~~~~l~l~GGT~v~~s 126 (339)
T PRK04204 47 QHLTAVKAAAEICNAEVEGAELGSQELVFIPGPIRGGDYRFDIGTAGSITLVLQTLLPALLFADGPSRVTISGGTDVPWA 126 (339)
T ss_pred HHHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 99999999999709868622359657999688645864898558873124789999999986799659999843489999
Q ss_pred HHHH----HHHHHHHCCCCCCC
Q ss_conf 1599----89987501454432
Q gi|254780927|r 201 PEVV----DLAHCLNSMGAKIS 218 (430)
Q Consensus 201 P~i~----~t~~~L~~~Gv~I~ 218 (430)
T Consensus 127 Ps~Dy~~~v~lP~l~~~G~~~~ 148 (339)
T PRK04204 127 PPIDYIRRVFLPLLARMGIRVE 148 (339)
T ss_pred CCHHHHHHHHHHHHHHCCCCEE
T ss_conf 8989999999999997198679