HHsearch results for GI: 254780927 and protein with PDBid: 2o0b_A

Probab=99.82  E-value=1.2e-18  Score=139.58  Aligned_cols=306  Identities=21%  Similarity=0.248  Sum_probs=185.4

Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf             22533233321045305866333201212343332103322456861489995024433333334346661135665044
Q gi|254780927|r  107 VIGPLLAREGYARISLPGGCAIGTRPVDLFVDSLKSLGVVIKIDGGYVDARVSSKGLRGTSYTFPKVSVGATQVMMMVAS  186 (430)
Q Consensus       107 ~l~~lla~~~~~~v~l~G~~~l~~RP~~~l~~~L~~lGa~i~~~~g~~p~~i~g~~l~g~~i~l~~~S~q~~s~lLlaA~  186 (430)
                      ++.+|++...+++..+.+  -+...-+..++++|++||++|+.+++.+-  |.|.++.+-...++.-.++ +..-||.++
T Consensus        31 ilaaLa~~~~~G~s~i~n--~~~~~Dv~~~l~~L~~LG~~i~~~~~~~~--I~g~~~~~~~~~l~~g~Sg-t~~rll~~l  105 (450)
T 2o0b_A           31 VLAALAAAQGRGASTISG--ALRSRDTELMLDALQTLGLRVDGVGSELT--VSGRIEPGPGARVDCGLAG-TVLRFVPPL  105 (450)
T ss_dssp             HHHHHHHHTTCCCEEEET--CCCSHHHHHHHHHHHHTTCEEECSSSCEE--EESCCCCCTTCEEECTTCH-HHHHHHHHH
T ss_pred             HHHHHCCCCCCCEEEECC--CCCCHHHHHHHHHHHHCCCEEEEECCEEE--EECCCCCCCCCCEEHHCCH-HHHHHHHHH
T ss_conf             999862746699299898--99069999999999987998998799999--9688678987632211027-799999999


Q ss_pred             C--CCCCCCCCC--CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCHHC--CHHHHHCCCCCCC
Q ss_conf             4--468733233--222015998998750145443202443212025542222342001431000--0100000124442
Q gi|254780927|r  187 L--SHGDTSIYN--AAREPEVVDLAHCLNSMGAKISGMGSSTITIQGVTSLSGTRHRILPDRIEA--GTYAMAVAMTGGD  260 (430)
Q Consensus       187 ~--a~G~t~I~~--~~~~P~i~~t~~~L~~~Gv~I~~~~~~~i~I~g~~~l~~~~~~V~~D~ssA--a~fl~Aaalt~g~  260 (430)
                      +  ..+.+++.+  -..++.+..+++.|++||++|+..+ .-+.+.+...+.+.+|.++.+-||.  ...+.||+.....
T Consensus       106 ~a~~~~~~~l~G~~sL~~RP~~~l~~~L~~lGa~i~~~~-~p~~i~~~~~l~~~~i~l~~~~sSQ~~salLlaa~~~~~g  184 (450)
T 2o0b_A          106 AALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTG-LPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDG  184 (450)
T ss_dssp             HTTSSSEEEEECCGGGGGSCCHHHHHHHHHTTCEEECSS-SSEEEECCSCCCCEEEEECCTTCTHHHHHHHHHGGGSTTC
T ss_pred             HHHCCEEEEECCCHHHCCCCCHHHHHHHHHCCCEEECCC-CCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
T ss_conf             962673699658767515985588767651480786685-7557855888669768715877319998999877760699


Q ss_pred             EEEE----CCCCC-CCCCHHHHHHHCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCC--HHHHHHHHHCCCCCE
Q ss_conf             0100----23456-4210468897526743674451267532676431576215356664210--134667631356641
Q gi|254780927|r  261 VILK----MTDSS-LLKTVFKVMRQTGVDIDIIDEGIRVRWNGEKLRPVDVITAPFPGFPTDL--QAQFMAMMCCAAGIS  333 (430)
Q Consensus       261 i~i~----n~~~~-~~~~~l~iL~~mGa~i~~~~~~i~V~~~~~~l~~~di~~~~~pg~~~D~--~p~la~laa~A~G~s  333 (430)
                      +++.    |.... ...-.+++|++||++|+..+....+..+ .++.+.+..-.      .|.  ..+++++++...|..
T Consensus       185 ~~~i~~~~~~~s~p~i~~t~~~L~~~G~~I~~~~~~~~~i~~-~~~~~~~~~v~------~D~ssAa~~l~aa~i~~~~i  257 (450)
T 2o0b_A          185 LTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRP-GPVAARRWDIE------PDLTNAVAFLSAAVVSGGTV  257 (450)
T ss_dssp             EEEEECSSCCCCHHHHHHHHHHHHHTTCCEECCSTTEEEECC-CCCCCCCEECC------BCHHHHHHHHHHHHHHTCEE
T ss_pred             CEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECC-CEECCCCCCCC------CCHHHHHHHHHHHHHCCCCE
T ss_conf             644313454467500998999998779358834784576225-02135321168------87678999999998579957


Q ss_pred             EEEE----ECCHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCEEEEEEEC---CHHHHHHHHHHHHHC--CCEEEEECC
Q ss_conf             6732----0465675667889748858999789699988898510156608---189999999999854--981999243
Q gi|254780927|r  334 HITE----TIFENRFMHVQELVRLGARISLSGQTARVEGVQGLRGAPVMAT---DLRASVSLVIAALAA--QGETEISRV  404 (430)
Q Consensus       334 ~I~e----~i~e~R~~~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~---DHRiaMa~~ia~L~a--~g~~~I~~~  404 (430)
                      ++..    ....+| ..++-|++||++++..++++.+.++..+++..++..   |.-  +.++++++.+  ++.+++.|+
T Consensus       258 ~i~~~~~~~~q~~~-~~l~~L~~mG~~i~~~~~~~~v~~~~~l~~~~~~~~~~pdl~--p~l~~la~~a~~~~~s~i~gi  334 (450)
T 2o0b_A          258 RITGWPRVSVQPAD-HILAILRQLNAVVIHADSSLEVRGPTGYDGFDVDLRAVGELT--PSVAALAALASPGSVSRLSGI  334 (450)
T ss_dssp             EETTCCSSCSSCHH-HHHHHHHHTTCEEEEETTEEEEECCSCCCCCEEECTTCGGGH--HHHHHHHHTSSTTCEEEEESC
T ss_pred             EEECCCCCCCCCHH-HHHHHHHHCCCEEEECCCCEEECCCCCCCEEECCCCCCCCCC--HHHHHHHHHHHCCCCEEECCH
T ss_conf             98424323335076-999999865947997188379845765320531666675431--256778887414774022151


Q ss_pred             CEECCCCCC----HHHHHHHCCCEEEEE
Q ss_conf             301177848----788998669789995
Q gi|254780927|r  405 YHLDRGFEC----LEKKLSRCGALIQRI  428 (430)
Q Consensus       405 ~~i~ksyp~----f~~~L~~LGa~Ie~i  428 (430)
                      ++++--..|    +.+.|+++|++++.-
T Consensus       335 ~~lr~KESdRi~~~~~~L~klG~~~~~~  362 (450)
T 2o0b_A          335 AHLRGHETDRLAALSTEINRLGGTCRET  362 (450)
T ss_dssp             GGGGGSSSCHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHEHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             0311010069999999999779989997