HHsearch results for GI: 254780927 and protein with PDBid: 2yvw_A
>2yvw_A UDP-N-acetylglucosamine 1- carboxyvinyltransferase; peptidoglycan, structural genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus VF5}
Probab=100.00 E-value=0 Score=661.99 Aligned_cols=413 Identities=41% Similarity=0.640 Sum_probs=367.8
Q ss_pred CCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCE
Q ss_conf 94389827973137897696466899999999746996999869836999999999997498999927741142024525
Q gi|254780927|r 1 MDRIKIIGGNKLNGTIAISGAKNASLPVMIASLLTSETLTLENIPDLADVKLLIRILRSHGVEILSDSSYNDQNKSYSST 80 (430)
Q Consensus 1 M~~l~V~g~~~L~G~i~vpgSKs~s~Ral~aaaLa~g~s~i~n~~~s~D~~~~~~~l~~lG~~i~~~~~~~~~~~~~~~~ 80 (430)
|+.|+|+|+++|+|+|++|||||+|||+|++|+|++|+|+|+|+|+|+|+++|+++||+||++|+++++...+.
T Consensus 10 ~~~~~i~g~~~L~G~v~ipgSKS~s~RaLi~aaLa~g~s~i~n~l~s~D~~~~l~aL~~LGa~I~~~~~~~~i~------ 83 (425)
T 2yvw_A 10 RDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPDLLDVRNTLLLLRELGAELEFLNNTVFIN------ 83 (425)
T ss_dssp CCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCCSHHHHHHHHHHHHTTCEEEEETTEEEEE------
T ss_pred CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCEEEEE------
T ss_conf 52899979796788997788199999999999977996999128907999999999997799899839999995------
Q ss_pred EEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 99943666586444023431132110225332333210453058663332012123433321033224568614899950
Q gi|254780927|r 81 MHFRCRHIVDLTGSYDLVSKMRASFWVIGPLLAREGYARISLPGGCAIGTRPVDLFVDSLKSLGVVIKIDGGYVDARVSS 160 (430)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~r~s~~~l~~lla~~~~~~v~l~G~~~l~~RP~~~l~~~L~~lGa~i~~~~g~~p~~i~g 160 (430)
+..... ..+.......+++.+++++++++++...+.++|+++|++|||++++++|++||++++..++.+++.+.+
T Consensus 84 ----~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~G~~~l~~Rp~~~l~~~L~~lG~~~~~~~~~~~~~~~~ 158 (425)
T 2yvw_A 84 ----PSINSF-ITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGCSIGARPIDQHLKFFKEAGADVEVREGYVYVNLKE 158 (425)
T ss_dssp ----CCCCCC-EECHHHHHHCGGGGGGHHHHHHHHSEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEEEETTEEEEECSS
T ss_pred ----CCCCCC-CCCHHHHHCCCCCHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECCCC
T ss_conf ----897776-788778631563011124156644874474137544688978887630110000000246740003553
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEE
Q ss_conf 24433333334346661135665044446873323322201599899875014544320244321202554222234200
Q gi|254780927|r 161 KGLRGTSYTFPKVSVGATQVMMMVASLSHGDTSIYNAAREPEVVDLAHCLNSMGAKISGMGSSTITIQGVTSLSGTRHRI 240 (430)
Q Consensus 161 ~~l~g~~i~l~~~S~q~~s~lLlaA~~a~G~t~I~~~~~~P~i~~t~~~L~~~Gv~I~~~~~~~i~I~g~~~l~~~~~~V 240 (430)
..+..+..+.+|+|++++++++++.+.|.+++.+..++||+++|+++|++||++|++.++ .+.++|++.|++.+|.|
T Consensus 159 --~~~~~~~~~~~s~~~~~~~l~~~~~~~~~t~~~~~~s~~~i~~t~~~l~~~g~~v~~~~~-~i~i~g~~~~~~~~~~V 235 (425)
T 2yvw_A 159 --KRRVHFKFDLVTVTGTENALLYLASVPEESILENIALEPEVMDLIEVLKKMGAHVKVEGR-SAYVKGSENLKGFTHSV 235 (425)
T ss_dssp --CCCCEEECSSCCHHHHHHHHHHHTTCSSEEEEESCCCCHHHHHHHHHHHHTTCEEEEETT-EEEEECCSSCCCCEEEC
T ss_pred --CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCE-EEEEECCCCCCCCEEEE
T ss_conf --323420355431367899998997479972023224442079999999857963130120-48971672147953895
Q ss_pred CCCCHHCCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCHH
Q ss_conf 14310000100000124442010023456421046889752674367445126753267643157621535666421013
Q gi|254780927|r 241 LPDRIEAGTYAMAVAMTGGDVILKMTDSSLLKTVFKVMRQTGVDIDIIDEGIRVRWNGEKLRPVDVITAPFPGFPTDLQA 320 (430)
Q Consensus 241 ~~D~ssAa~fl~Aaalt~g~i~i~n~~~~~~~~~l~iL~~mGa~i~~~~~~i~V~~~~~~l~~~di~~~~~pg~~~D~~p 320 (430)
|||||+|+||++||++++|+++++|+..++.|....++.+||+.+....+...+... ..++..+++..++|++++|++|
T Consensus 236 ~~D~ssAa~~~~aa~l~~g~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~ 314 (425)
T 2yvw_A 236 IPDRIEAGTFMVGAVLTDGEILLENARINHLRAVVEKLKLIGGEVVEENGNLRVFRK-ESLRACDIETQVYPGFPTDMQA 314 (425)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEESCCGGGCHHHHHHHHHHTEEEEEETTEEEEEEC-SCCBCCCEEBCSTTSBCHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCEEEEECCCEEEEEC-CCCCCCCCCCCCCCCCCHHCCH
T ss_conf 788367777888864269846993676653123446898727658960463267522-4435555677768775111001
Q ss_pred HHHHHHHCCCCCEEEEEECCHHHHH-HHHHHHHCCCEEEEECCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCEE
Q ss_conf 4667631356641673204656756-678897488589997896999888985101566081899999999998549819
Q gi|254780927|r 321 QFMAMMCCAAGISHITETIFENRFM-HVQELVRLGARISLSGQTARVEGVQGLRGAPVMATDLRASVSLVIAALAAQGET 399 (430)
Q Consensus 321 ~la~laa~A~G~s~I~e~i~e~R~~-~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiaMa~~ia~L~a~g~~ 399 (430)
++++++++|+|.++++++. .||+. .++||+|||++|++++|+++|+|+++|+|++++++||||||||++|||.++|++
T Consensus 315 ~~~~~a~~a~G~~~lr~KE-sdRi~~~~~~L~klG~~v~~~~d~l~I~G~~~l~g~~v~s~DHRiaMa~avaal~~~g~~ 393 (425)
T 2yvw_A 315 QFMALLSVAKGKSRIKENI-FEHRFHHAQELNRLGANITVRGNTAYVEGVERLYGSEVYSTDLRASASLVLAGLVAQGET 393 (425)
T ss_dssp HHHHHHTTSBSEEEEECSS-CTTCCHHHHHHHTTTCCEEEETTEEEEECCSCCBCCEEECCCTTTTHHHHHHHHHSBSEE
T ss_pred HHHHHEEEECCCEEEEEEC-CHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCE
T ss_conf 3212204824618999620-236889999999789979998998999899987177356885899999999998589939
Q ss_pred EEECCCEECCCCCCHHHHHHHCCCEEEEEC
Q ss_conf 992433011778487889986697899951
Q gi|254780927|r 400 EISRVYHLDRGFECLEKKLSRCGALIQRIK 429 (430)
Q Consensus 400 ~I~~~~~i~ksyp~f~~~L~~LGa~Ie~i~ 429 (430)
+|+|++||+||||+||++|++|||+||||+
T Consensus 394 ~I~~~~~v~kSyP~F~~~l~~LGa~Ie~i~ 423 (425)
T 2yvw_A 394 VVRDVYHLDRGYEKLEEKLKKLGADIERVS 423 (425)
T ss_dssp EEECTHHHHHHCSSHHHHHHHTTCCEEEEC
T ss_pred EECCCEEEECCCHHHHHHHHHCCCEEEEEE
T ss_conf 986742897975319999996799899983