HHsearch results for GI: 254780927 and protein with PDBid: 2yvw_A

>2yvw_A UDP-N-acetylglucosamine 1- carboxyvinyltransferase; peptidoglycan, structural genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus VF5}
Probab=100.00  E-value=0  Score=661.99  Aligned_cols=413  Identities=41%  Similarity=0.640  Sum_probs=367.8

Q ss_pred             CCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCE
Q ss_conf             94389827973137897696466899999999746996999869836999999999997498999927741142024525
Q gi|254780927|r    1 MDRIKIIGGNKLNGTIAISGAKNASLPVMIASLLTSETLTLENIPDLADVKLLIRILRSHGVEILSDSSYNDQNKSYSST   80 (430)
Q Consensus         1 M~~l~V~g~~~L~G~i~vpgSKs~s~Ral~aaaLa~g~s~i~n~~~s~D~~~~~~~l~~lG~~i~~~~~~~~~~~~~~~~   80 (430)
                      |+.|+|+|+++|+|+|++|||||+|||+|++|+|++|+|+|+|+|+|+|+++|+++||+||++|+++++...+.      
T Consensus        10 ~~~~~i~g~~~L~G~v~ipgSKS~s~RaLi~aaLa~g~s~i~n~l~s~D~~~~l~aL~~LGa~I~~~~~~~~i~------   83 (425)
T 2yvw_A           10 RDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPDLLDVRNTLLLLRELGAELEFLNNTVFIN------   83 (425)
T ss_dssp             CCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCCSHHHHHHHHHHHHTTCEEEEETTEEEEE------
T ss_pred             CEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCEEEEE------
T ss_conf             52899979796788997788199999999999977996999128907999999999997799899839999995------


Q ss_pred             EEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf             99943666586444023431132110225332333210453058663332012123433321033224568614899950
Q gi|254780927|r   81 MHFRCRHIVDLTGSYDLVSKMRASFWVIGPLLAREGYARISLPGGCAIGTRPVDLFVDSLKSLGVVIKIDGGYVDARVSS  160 (430)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~r~s~~~l~~lla~~~~~~v~l~G~~~l~~RP~~~l~~~L~~lGa~i~~~~g~~p~~i~g  160 (430)
                          +..... ..+.......+++.+++++++++++...+.++|+++|++|||++++++|++||++++..++.+++.+.+
T Consensus        84 ----~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~G~~~l~~Rp~~~l~~~L~~lG~~~~~~~~~~~~~~~~  158 (425)
T 2yvw_A           84 ----PSINSF-ITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGCSIGARPIDQHLKFFKEAGADVEVREGYVYVNLKE  158 (425)
T ss_dssp             ----CCCCCC-EECHHHHHHCGGGGGGHHHHHHHHSEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEEEETTEEEEECSS
T ss_pred             ----CCCCCC-CCCHHHHHCCCCCHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECCCC
T ss_conf             ----897776-788778631563011124156644874474137544688978887630110000000246740003553


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEE
Q ss_conf             24433333334346661135665044446873323322201599899875014544320244321202554222234200
Q gi|254780927|r  161 KGLRGTSYTFPKVSVGATQVMMMVASLSHGDTSIYNAAREPEVVDLAHCLNSMGAKISGMGSSTITIQGVTSLSGTRHRI  240 (430)
Q Consensus       161 ~~l~g~~i~l~~~S~q~~s~lLlaA~~a~G~t~I~~~~~~P~i~~t~~~L~~~Gv~I~~~~~~~i~I~g~~~l~~~~~~V  240 (430)
                        ..+..+..+.+|+|++++++++++.+.|.+++.+..++||+++|+++|++||++|++.++ .+.++|++.|++.+|.|
T Consensus       159 --~~~~~~~~~~~s~~~~~~~l~~~~~~~~~t~~~~~~s~~~i~~t~~~l~~~g~~v~~~~~-~i~i~g~~~~~~~~~~V  235 (425)
T 2yvw_A          159 --KRRVHFKFDLVTVTGTENALLYLASVPEESILENIALEPEVMDLIEVLKKMGAHVKVEGR-SAYVKGSENLKGFTHSV  235 (425)
T ss_dssp             --CCCCEEECSSCCHHHHHHHHHHHTTCSSEEEEESCCCCHHHHHHHHHHHHTTCEEEEETT-EEEEECCSSCCCCEEEC
T ss_pred             --CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCE-EEEEECCCCCCCCEEEE
T ss_conf             --323420355431367899998997479972023224442079999999857963130120-48971672147953895


Q ss_pred             CCCCHHCCHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCHH
Q ss_conf             14310000100000124442010023456421046889752674367445126753267643157621535666421013
Q gi|254780927|r  241 LPDRIEAGTYAMAVAMTGGDVILKMTDSSLLKTVFKVMRQTGVDIDIIDEGIRVRWNGEKLRPVDVITAPFPGFPTDLQA  320 (430)
Q Consensus       241 ~~D~ssAa~fl~Aaalt~g~i~i~n~~~~~~~~~l~iL~~mGa~i~~~~~~i~V~~~~~~l~~~di~~~~~pg~~~D~~p  320 (430)
                      |||||+|+||++||++++|+++++|+..++.|....++.+||+.+....+...+... ..++..+++..++|++++|++|
T Consensus       236 ~~D~ssAa~~~~aa~l~~g~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~  314 (425)
T 2yvw_A          236 IPDRIEAGTFMVGAVLTDGEILLENARINHLRAVVEKLKLIGGEVVEENGNLRVFRK-ESLRACDIETQVYPGFPTDMQA  314 (425)
T ss_dssp             CBCHHHHHHHHHHHHHTTCEEEEESCCGGGCHHHHHHHHHHTEEEEEETTEEEEEEC-SCCBCCCEEBCSTTSBCHHHHH
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCEEEEECCCEEEEEC-CCCCCCCCCCCCCCCCCHHCCH
T ss_conf             788367777888864269846993676653123446898727658960463267522-4435555677768775111001


Q ss_pred             HHHHHHHCCCCCEEEEEECCHHHHH-HHHHHHHCCCEEEEECCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCEE
Q ss_conf             4667631356641673204656756-678897488589997896999888985101566081899999999998549819
Q gi|254780927|r  321 QFMAMMCCAAGISHITETIFENRFM-HVQELVRLGARISLSGQTARVEGVQGLRGAPVMATDLRASVSLVIAALAAQGET  399 (430)
Q Consensus       321 ~la~laa~A~G~s~I~e~i~e~R~~-~~~eL~klG~~v~~~~d~l~I~G~~~l~g~~v~~~DHRiaMa~~ia~L~a~g~~  399 (430)
                      ++++++++|+|.++++++. .||+. .++||+|||++|++++|+++|+|+++|+|++++++||||||||++|||.++|++
T Consensus       315 ~~~~~a~~a~G~~~lr~KE-sdRi~~~~~~L~klG~~v~~~~d~l~I~G~~~l~g~~v~s~DHRiaMa~avaal~~~g~~  393 (425)
T 2yvw_A          315 QFMALLSVAKGKSRIKENI-FEHRFHHAQELNRLGANITVRGNTAYVEGVERLYGSEVYSTDLRASASLVLAGLVAQGET  393 (425)
T ss_dssp             HHHHHHTTSBSEEEEECSS-CTTCCHHHHHHHTTTCCEEEETTEEEEECCSCCBCCEEECCCTTTTHHHHHHHHHSBSEE
T ss_pred             HHHHHEEEECCCEEEEEEC-CHHHHHHHHHHHHCCCEEEEECCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCCCE
T ss_conf             3212204824618999620-236889999999789979998998999899987177356885899999999998589939


Q ss_pred             EEECCCEECCCCCCHHHHHHHCCCEEEEEC
Q ss_conf             992433011778487889986697899951
Q gi|254780927|r  400 EISRVYHLDRGFECLEKKLSRCGALIQRIK  429 (430)
Q Consensus       400 ~I~~~~~i~ksyp~f~~~L~~LGa~Ie~i~  429 (430)
                      +|+|++||+||||+||++|++|||+||||+
T Consensus       394 ~I~~~~~v~kSyP~F~~~l~~LGa~Ie~i~  423 (425)
T 2yvw_A          394 VVRDVYHLDRGYEKLEEKLKKLGADIERVS  423 (425)
T ss_dssp             EEECTHHHHHHCSSHHHHHHHTTCCEEEEC
T ss_pred             EECCCEEEECCCHHHHHHHHHCCCEEEEEE
T ss_conf             986742897975319999996799899983